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Overview

ID MAG00134
Name BYD3_bin.50
Sample SMP0003
Taxonomy
Kingdom Bacteria
Phylum Acidobacteriota
Class Vicinamibacteria
Order Vicinamibacterales
Family UBA2999
Genus Gp6-AA40
Species
Assembly information
Completeness (%) 93.23
Contamination (%) 5.97
GC content (%) 64.0
N50 (bp) 108,855
Genome size (bp) 4,954,331

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes4030

Gene name Description KEGG GOs EC E-value Score Sequence
BYD3_k127_1000520_0 DNA helicase K03654 - 3.6.4.12 4.525e-258 811.0
BYD3_k127_1000520_1 Putative esterase K07214 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005475 589.0
BYD3_k127_1000520_2 Tryptophan halogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006123 594.0
BYD3_k127_1000520_3 Carboxypeptidase regulatory-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004923 584.0
BYD3_k127_1000520_4 TonB dependent receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001933 297.0
BYD3_k127_1000520_5 Transcriptional regulatory protein, C terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000215 295.0
BYD3_k127_1000520_6 COG1834 N-Dimethylarginine dimethylaminohydrolase K01482 - 3.5.3.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007533 290.0
BYD3_k127_1000520_7 SMP-30 Gluconolaconase LRE-like K01053 - 3.1.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000167 281.0
BYD3_k127_1000520_8 Helix-turn-helix - - - 0.00000000000000000000000001383 110.0
BYD3_k127_1000520_9 - - - - 0.0000003651 58.0
BYD3_k127_1045712_0 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg K00174 - 1.2.7.11,1.2.7.3 2.101e-266 833.0
BYD3_k127_1045712_1 Proton-conducting membrane transporter K00342,K05575 - 1.6.5.3 4.225e-198 634.0
BYD3_k127_1045712_10 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337,K05572 GO:0003674,GO:0003824,GO:0003954,GO:0006091,GO:0008137,GO:0008150,GO:0008152,GO:0009987,GO:0015980,GO:0016491,GO:0016651,GO:0016655,GO:0044237,GO:0045333,GO:0050136,GO:0055114 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002547 357.0
BYD3_k127_1045712_11 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005952 354.0
BYD3_k127_1045712_12 Glutaminase K01425 - 3.5.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004093 325.0
BYD3_k127_1045712_13 cAMP biosynthetic process K03641 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009305 321.0
BYD3_k127_1045712_14 Transcriptional regulator, Crp Fnr family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000035 258.0
BYD3_k127_1045712_15 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000008734 228.0
BYD3_k127_1045712_16 Carboxypeptidase regulatory-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000003746 239.0
BYD3_k127_1045712_17 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000000000000009792 214.0
BYD3_k127_1045712_18 Mo-molybdopterin cofactor metabolic process K03638 - 2.7.7.75 0.000000000000000000000000000000000000000000000000000313 190.0
BYD3_k127_1045712_19 Ferredoxin - - - 0.0000000000000000000000000000000000000005971 161.0
BYD3_k127_1045712_2 NADH-quinone oxidoreductase chain L K00341,K05577 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004761 575.0
BYD3_k127_1045712_20 Protein of unknown function, DUF481 - - - 0.00000000000000000000000000000000000005154 157.0
BYD3_k127_1045712_21 OmpA family K03640 - - 0.00000000000000000000000000000000005485 142.0
BYD3_k127_1045712_22 4Fe-4S dicluster domain K00338,K02573,K03941 GO:0003674,GO:0003824,GO:0003954,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564 1.6.5.3,1.6.99.3 0.0000000000000000000000000000000001093 141.0
BYD3_k127_1045712_23 Peptidase family M50 K06212,K06402 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000002584 134.0
BYD3_k127_1045712_24 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000005579 139.0
BYD3_k127_1045712_25 transferase activity, transferring acyl groups other than amino-acyl groups - - - 0.00000000000000000000000000001222 134.0
BYD3_k127_1045712_26 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340,K05576 - 1.6.5.3 0.00000000000000000000000000002571 119.0
BYD3_k127_1045712_27 Respiratory-chain NADH dehydrogenase, 30 Kd subunit K00332 - 1.6.5.3 0.00000000000000000000000001761 116.0
BYD3_k127_1045712_28 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 - 1.6.5.3 0.00000000000000000000000006705 113.0
BYD3_k127_1045712_29 DinB superfamily - - - 0.0000000000000000000352 98.0
BYD3_k127_1045712_3 Pyruvate ferredoxin oxidoreductase beta subunit C terminal K00175 - 1.2.7.11,1.2.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000254 506.0
BYD3_k127_1045712_30 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 K00339,K05578 - 1.6.5.3 0.0000000000000000004025 96.0
BYD3_k127_1045712_31 SNARE associated Golgi protein - - - 0.0000000000000000004221 94.0
BYD3_k127_1045712_32 Cupin 2, conserved barrel domain protein K16953,K19547 - 4.4.1.3,5.3.3.19 0.00000000000000002774 87.0
BYD3_k127_1045712_33 AMP binding - - - 0.00000000004867 74.0
BYD3_k127_1045712_34 Domain of unknown function (DUF4136) - - - 0.0000000008137 69.0
BYD3_k127_1045712_4 COG NOG10142 non supervised orthologous group - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004329 500.0
BYD3_k127_1045712_5 PFAM amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006361 467.0
BYD3_k127_1045712_6 NAD binding K00333,K05579,K13378 GO:0003674,GO:0003824,GO:0003954,GO:0008137,GO:0008150,GO:0008152,GO:0016491,GO:0016651,GO:0016655,GO:0050136,GO:0055114 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007217 451.0
BYD3_k127_1045712_7 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343,K05573 GO:0003674,GO:0003824,GO:0003954,GO:0008137,GO:0008150,GO:0008152,GO:0016491,GO:0016651,GO:0016655,GO:0050136,GO:0055114 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002269 436.0
BYD3_k127_1045712_8 MoeA N-terminal region (domain I and II) K03750,K07219 - 2.10.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000164 403.0
BYD3_k127_1045712_9 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001592 381.0
BYD3_k127_1054562_0 Outer membrane protein beta-barrel family - - - 4.509e-262 833.0
BYD3_k127_1054562_1 Penicillin amidase K07116 - 3.5.1.97 1.833e-206 666.0
BYD3_k127_1054562_10 CAAX protease self-immunity K07052 - - 0.000000000000000000000000000000000000000000000000000000000000000003426 237.0
BYD3_k127_1054562_11 TonB-dependent receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000001026 255.0
BYD3_k127_1054562_12 Peptidase, M16 K07263 - - 0.0000000000000000000000000000000000000000000000000000000001594 218.0
BYD3_k127_1054562_13 Domain of Unknown Function (DUF1206) - - - 0.00000000000000000000000000000000000000000000000000000004664 205.0
BYD3_k127_1054562_14 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase K07029 GO:0003674,GO:0003824,GO:0004143,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237 2.7.1.107 0.0000000000000000000000000000000000000000000000006942 191.0
BYD3_k127_1054562_15 - - - - 0.0000000000000000000000000000000000000000000007161 171.0
BYD3_k127_1054562_16 Protein of unknown function, DUF488 - - - 0.000000000000000000000000000000000000003399 149.0
BYD3_k127_1054562_17 Gamma-glutamyl cyclotransferase, AIG2-like - - - 0.000000000000000000000000000000000000699 142.0
BYD3_k127_1054562_18 - - - - 0.0000000000000000000000000000000005407 138.0
BYD3_k127_1054562_19 serine-type endopeptidase activity K14645,K20276 - - 0.000000000000000000000000000000001074 139.0
BYD3_k127_1054562_2 MmgE/PrpD family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002064 587.0
BYD3_k127_1054562_20 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.000000000000000000000000000000001096 134.0
BYD3_k127_1054562_21 - - - - 0.00000000000000000000000000000001295 143.0
BYD3_k127_1054562_22 - - - - 0.00000000000000000000000000004269 122.0
BYD3_k127_1054562_23 - - - - 0.0000000000000000000000000000788 128.0
BYD3_k127_1054562_24 ATP-dependent protease La (LON) substrate-binding domain K07157 - - 0.000000000000000000000000001069 126.0
BYD3_k127_1054562_26 AAA ATPase domain - - - 0.0000000000000000002739 102.0
BYD3_k127_1054562_27 - - - - 0.000000000000001175 83.0
BYD3_k127_1054562_28 N-acetylglucosaminylinositol deacetylase activity - - - 0.000000000000002187 78.0
BYD3_k127_1054562_29 - - - - 0.00000000000009771 82.0
BYD3_k127_1054562_3 5'-3' exonuclease, N-terminal resolvase-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000123 389.0
BYD3_k127_1054562_30 pyridoxamine 5-phosphate - - - 0.00000000002333 70.0
BYD3_k127_1054562_31 SMART Tetratricopeptide domain protein - - - 0.00000000007071 74.0
BYD3_k127_1054562_32 WD40 domain protein beta Propeller K12132 - 2.7.11.1 0.0000000001311 62.0
BYD3_k127_1054562_33 - - - - 0.000000005816 67.0
BYD3_k127_1054562_4 PFAM amidohydrolase 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005609 377.0
BYD3_k127_1054562_5 phosphorelay signal transduction system K01338 - 3.4.21.53 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005893 388.0
BYD3_k127_1054562_6 Belongs to the arylamine N-acetyltransferase family K00675 - 2.3.1.118 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008502 352.0
BYD3_k127_1054562_7 Flavin containing amine oxidoreductase K00274,K21639 - 1.4.3.25,1.4.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001298 342.0
BYD3_k127_1054562_8 CAAX protease self-immunity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001348 317.0
BYD3_k127_1054562_9 Esterase-like activity of phytase - - - 0.000000000000000000000000000000000000000000000000000000000000000001518 241.0
BYD3_k127_1055534_0 Protein of unknown function (DUF3738) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003121 343.0
BYD3_k127_1055534_1 Peptidase M56, BlaR1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007309 273.0
BYD3_k127_1055534_2 negative regulation of transcription, DNA-templated - - - 0.0000000000000000000000000000000000000001263 153.0
BYD3_k127_1055534_3 Transcriptional regulator K07979 - - 0.000000000000000000000000000009217 124.0
BYD3_k127_1055534_4 gag-polyprotein putative aspartyl protease - - - 0.00000000000000001544 90.0
BYD3_k127_1055534_5 Protein of unknown function (DUF3738) - - - 0.00000000000000003449 90.0
BYD3_k127_11549_0 Carboxypeptidase regulatory-like domain - - - 0.0 1084.0
BYD3_k127_11549_1 PFAM Rhodanese domain protein K01011 - 2.8.1.1,2.8.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007673 460.0
BYD3_k127_11549_2 Glycosyltransferase family 20 K00697 - 2.4.1.15,2.4.1.347 0.0000000000000000000000006832 105.0
BYD3_k127_1199351_0 Conserved carboxylase domain K01958 - 6.4.1.1 0.0 1366.0
BYD3_k127_1199351_1 Amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003145 311.0
BYD3_k127_1199351_2 NADPH quinone - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002459 268.0
BYD3_k127_1199351_3 acyl-CoA dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002273 263.0
BYD3_k127_1199351_4 Glucose dehydrogenase C-terminus K00001,K00344 - 1.1.1.1,1.6.5.5 0.0000000000000000000000000000000000000000000000000000000006214 214.0
BYD3_k127_1199351_5 FMN reductase (NADPH) activity - - - 0.00000000000000000000000000000000000000000000000000005136 200.0
BYD3_k127_1199351_6 metallopeptidase activity - - - 0.000000000000000000009444 97.0
BYD3_k127_1199351_7 - - - - 0.000000000000001083 82.0
BYD3_k127_1262545_0 PFAM transposase mutator type K07493 - - 3.82e-203 637.0
BYD3_k127_1262545_1 Glutathione-dependent formaldehyde-activating - - - 0.0000000000000000000000000000000000000000000000000001166 186.0
BYD3_k127_1297601_0 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 0.0 1136.0
BYD3_k127_1297601_1 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072,K12257 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008150,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0033036,GO:0042886,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002837 460.0
BYD3_k127_1297601_2 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001379 292.0
BYD3_k127_1297601_3 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.000000000000000000000000000000000000000000000000000000000000000002849 240.0
BYD3_k127_1297601_4 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.000000000000000000000000000000000000000000000000000000000000001852 229.0
BYD3_k127_1297601_5 MotA TolQ ExbB proton channel K03561,K03562 - - 0.0000000000000000000000000000000000000000000000000000000000000298 221.0
BYD3_k127_1297601_6 Protein of unknown function (DUF502) - - - 0.00000000000000000000000000000000000000004763 158.0
BYD3_k127_1297601_7 TIGRFAM TonB K03832 - - 0.000000000000000000000000000000009957 137.0
BYD3_k127_1297601_8 Preprotein translocase subunit K03210 - - 0.0000000000000000003711 92.0
BYD3_k127_1297601_9 PFAM Biopolymer transport protein ExbD TolR K03560 - - 0.000000000000000005395 88.0
BYD3_k127_1303821_0 Belongs to the GSP D family K02280 - - 0.000000000000000000000000000000000000000000000000000000000000000000000008798 252.0
BYD3_k127_1303821_1 Putative Flp pilus-assembly TadE/G-like - - - 0.00001341 57.0
BYD3_k127_1304822_0 Metallo-beta-lactamase superfamily K00784 - 3.1.26.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001203 349.0
BYD3_k127_1304822_1 Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state - GO:0003674,GO:0003756,GO:0003824,GO:0004175,GO:0004222,GO:0005488,GO:0005575,GO:0005623,GO:0006457,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009056,GO:0009057,GO:0009987,GO:0016020,GO:0016043,GO:0016787,GO:0016853,GO:0016860,GO:0016864,GO:0019538,GO:0022607,GO:0030163,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043163,GO:0043165,GO:0043167,GO:0043169,GO:0043170,GO:0044085,GO:0044091,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044464,GO:0045229,GO:0046872,GO:0051603,GO:0061024,GO:0061077,GO:0070011,GO:0071704,GO:0071709,GO:0071840,GO:0140096,GO:1901564,GO:1901565,GO:1901575 - 0.000000000000000000000000000000000000003472 154.0
BYD3_k127_1308128_0 LrgB-like family - - - 0.0000000000000000000000000000000000000000000000000000005501 202.0
BYD3_k127_1308128_1 Effector of murein hydrolase LrgA K06518 - - 0.000000000000000000000003277 108.0
BYD3_k127_1308128_3 - - - - 0.000000002996 64.0
BYD3_k127_1327203_0 PFAM transport-associated K04065 - - 0.00000000000000000000000000000000000000000000000002307 192.0
BYD3_k127_1327203_1 CBS domain containing protein - - - 0.0000006275 54.0
BYD3_k127_137287_0 Carboxypeptidase regulatory-like domain - - - 2.504e-235 766.0
BYD3_k127_137287_1 Carboxypeptidase regulatory-like domain - - - 2.224e-212 703.0
BYD3_k127_137287_10 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase K01057 - 3.1.1.31 0.0000000000000000000000000000000000000000000000001006 194.0
BYD3_k127_137287_11 Ribosomal protein L11 methyltransferase (PrmA) - - - 0.00000000000000000000000000000000000000000000006473 180.0
BYD3_k127_137287_12 Shikimate kinase K00851 - 2.7.1.12 0.00000000000000000000000000000000000000007086 168.0
BYD3_k127_137287_13 membrane - - - 0.0000000000000000000000000000000000000001208 153.0
BYD3_k127_137287_14 NMT1-like family K07080 - - 0.0000000000000000000000000107 121.0
BYD3_k127_137287_15 Toxic component of a toxin-antitoxin (TA) module. An RNase K18828 - - 0.0000000000000000000355 91.0
BYD3_k127_137287_16 Domain of unknown function (DUF4440) - - - 0.0000000000000007482 83.0
BYD3_k127_137287_17 - - - - 0.00000000000006306 76.0
BYD3_k127_137287_18 Calcineurin-like phosphoesterase - - - 0.00008522 57.0
BYD3_k127_137287_2 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009692 486.0
BYD3_k127_137287_3 Ring hydroxylating alpha subunit (catalytic domain) K00479 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003047 451.0
BYD3_k127_137287_4 Fatty acid hydroxylase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008473 359.0
BYD3_k127_137287_5 amino acid K03294,K20265 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003616 359.0
BYD3_k127_137287_6 D-gluconate metabolic process K00033 - 1.1.1.343,1.1.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001375 336.0
BYD3_k127_137287_7 Protein of unknown function (DUF1207) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001514 313.0
BYD3_k127_137287_8 Protein of unknown function DUF72 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001328 292.0
BYD3_k127_137287_9 PFAM alpha beta hydrolase fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000009706 241.0
BYD3_k127_1402338_0 Protein of unknown function (DUF938) - - - 0.00000000000000000000000000000000000000000000000000000000000002463 222.0
BYD3_k127_1402338_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K07640 - 2.7.13.3 0.00000000000000000000000000000000000001005 148.0
BYD3_k127_1402338_2 rRNA (guanine-N2-)-methyltransferase activity K08316,K15257 - 2.1.1.171 0.00000000006828 67.0
BYD3_k127_145819_0 Methyltransferase domain - - - 0.000000000000000003107 93.0
BYD3_k127_145819_1 PFAM Integrase core domain - - - 0.000000000008915 74.0
BYD3_k127_145819_2 transposition K07497 - - 0.00000000002171 76.0
BYD3_k127_1539115_0 Domain of unknown function (DUF3459) K01236 - 3.2.1.141 5.99e-236 745.0
BYD3_k127_1539115_1 metalloendopeptidase activity K08602 GO:0003674,GO:0003824,GO:0004175,GO:0004222,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006465,GO:0006508,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009987,GO:0010467,GO:0016485,GO:0016787,GO:0019538,GO:0034641,GO:0043170,GO:0043603,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0051604,GO:0070011,GO:0071704,GO:0140096,GO:1901564 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003871 617.0
BYD3_k127_1539115_10 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 GO:0000271,GO:0003674,GO:0003824,GO:0004373,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0005977,GO:0005978,GO:0006073,GO:0006091,GO:0006112,GO:0008150,GO:0008152,GO:0008194,GO:0009058,GO:0009059,GO:0009250,GO:0009987,GO:0015980,GO:0016051,GO:0016740,GO:0016757,GO:0016758,GO:0033692,GO:0034637,GO:0034645,GO:0035251,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0046527,GO:0055114,GO:0071704,GO:1901576 2.4.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006988 440.0
BYD3_k127_1539115_11 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005859 428.0
BYD3_k127_1539115_12 Radical SAM superfamily K04069 - 1.97.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001377 426.0
BYD3_k127_1539115_13 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003027 421.0
BYD3_k127_1539115_14 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001311 419.0
BYD3_k127_1539115_15 Bacterial fructose-1,6-bisphosphatase, glpX-encoded K02446 - 3.1.3.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001506 411.0
BYD3_k127_1539115_16 ferredoxin-NADP+ reductase activity K00384 - 1.8.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001007 395.0
BYD3_k127_1539115_17 Belongs to the D-alanine--D-alanine ligase family K01921,K01955 - 6.3.2.4,6.3.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002439 399.0
BYD3_k127_1539115_18 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001243 385.0
BYD3_k127_1539115_19 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004439 375.0
BYD3_k127_1539115_2 High confidence in function and specificity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002153 587.0
BYD3_k127_1539115_20 NMT1-like family K02051 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005694 376.0
BYD3_k127_1539115_21 Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX K00231 - 1.3.3.15,1.3.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002574 372.0
BYD3_k127_1539115_22 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007007 364.0
BYD3_k127_1539115_23 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001232 362.0
BYD3_k127_1539115_24 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006183 363.0
BYD3_k127_1539115_25 Major facilitator Superfamily K08223 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003623 351.0
BYD3_k127_1539115_26 Belongs to the NAD(P)-dependent epimerase dehydratase family K01784,K12448 - 5.1.3.2,5.1.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002831 346.0
BYD3_k127_1539115_27 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006051 347.0
BYD3_k127_1539115_28 PFAM HD domain K07814 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002628 336.0
BYD3_k127_1539115_29 Binding-protein-dependent transport system inner membrane component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005275 336.0
BYD3_k127_1539115_3 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003771 580.0
BYD3_k127_1539115_30 Belongs to the N(4) N(6)-methyltransferase family K00571,K00590 - 2.1.1.113,2.1.1.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001845 326.0
BYD3_k127_1539115_31 ABC transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005845 322.0
BYD3_k127_1539115_32 Zinc dependent phospholipase C - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007433 329.0
BYD3_k127_1539115_33 Belongs to the arginase family K01476 - 3.5.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004209 325.0
BYD3_k127_1539115_34 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine K07566 - 2.7.7.87 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009483 323.0
BYD3_k127_1539115_35 copper resistance - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000104 309.0
BYD3_k127_1539115_36 tRNA pseudouridine synthase activity K06173 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001529 290.0
BYD3_k127_1539115_37 Histone methylation protein DOT1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001622 281.0
BYD3_k127_1539115_38 eRF1 domain 3 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003984 284.0
BYD3_k127_1539115_39 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001155 264.0
BYD3_k127_1539115_4 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005936 544.0
BYD3_k127_1539115_40 Uracil DNA glycosylase superfamily K21929 - 3.2.2.27 0.00000000000000000000000000000000000000000000000000000000000000000000000002637 256.0
BYD3_k127_1539115_41 Peptidase family M50 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000009463 248.0
BYD3_k127_1539115_42 PFAM glycosyl transferase group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000002838 254.0
BYD3_k127_1539115_43 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.00000000000000000000000000000000000000000000000000000000000000000001284 241.0
BYD3_k127_1539115_44 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.00000000000000000000000000000000000000000000000000000000000000008382 229.0
BYD3_k127_1539115_45 S-adenosyl-l-methionine hydroxide adenosyltransferase K22205 - - 0.000000000000000000000000000000000000000000000000000000000001056 218.0
BYD3_k127_1539115_46 Belongs to the peptidase S8 family K17734 - - 0.00000000000000000000000000000000000000000000000000000000000343 229.0
BYD3_k127_1539115_47 peptidase S1 and S6, chymotrypsin Hap K04771 - 3.4.21.107 0.00000000000000000000000000000000000000000000000000000000003917 224.0
BYD3_k127_1539115_48 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid K13075 - 3.1.1.81 0.0000000000000000000000000000000000000000000000000000000002089 214.0
BYD3_k127_1539115_49 conserved domain frequently associated with peptide methionine sulfoxide reductase K07305 - 1.8.4.12 0.000000000000000000000000000000000000000000000000000000000647 211.0
BYD3_k127_1539115_5 Acyl-CoA dehydrogenase, C-terminal domain K16173 - 1.3.99.32 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006789 518.0
BYD3_k127_1539115_50 Mycothiol maleylpyruvate isomerase N-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000001744 212.0
BYD3_k127_1539115_51 Essential for recycling GMP and indirectly, cGMP K00942 - 2.7.4.8 0.00000000000000000000000000000000000000000000000000003274 196.0
BYD3_k127_1539115_52 Ribose/Galactose Isomerase K01808 - 5.3.1.6 0.0000000000000000000000000000000000000000000000000009066 186.0
BYD3_k127_1539115_53 PFAM Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000002647 193.0
BYD3_k127_1539115_54 DinB family - - - 0.000000000000000000000000000000000000000000000004369 177.0
BYD3_k127_1539115_55 Glycosyltransferase like family 2 K07011 - - 0.000000000000000000000000000000000000000000000008258 184.0
BYD3_k127_1539115_56 MFS_1 like family K08161 - - 0.0000000000000000000000000000000000000000000003315 184.0
BYD3_k127_1539115_57 PFAM Peptidase M11 gametolysin - - - 0.000000000000000000000000000000000000000000001718 187.0
BYD3_k127_1539115_58 - - - - 0.00000000000000000000000000000000000000000002164 182.0
BYD3_k127_1539115_59 Domain of unknown function (DUF1732) - - - 0.00000000000000000000000000000000000000000007873 173.0
BYD3_k127_1539115_6 Evidence 2a Function of homologous gene experimentally demonstrated in an other organism K06147,K11085 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000185 513.0
BYD3_k127_1539115_60 Outer membrane receptor - - - 0.0000000000000000000000000000000000000001677 174.0
BYD3_k127_1539115_61 Belongs to the peptidase S11 family K01286,K07258,K07262 GO:0000003,GO:0000270,GO:0000910,GO:0003674,GO:0003824,GO:0004175,GO:0005575,GO:0005623,GO:0006022,GO:0006508,GO:0006807,GO:0007049,GO:0008150,GO:0008152,GO:0008233,GO:0009987,GO:0016043,GO:0016787,GO:0019538,GO:0019954,GO:0022402,GO:0022414,GO:0030203,GO:0032505,GO:0042221,GO:0042493,GO:0042597,GO:0043093,GO:0043170,GO:0044238,GO:0044464,GO:0045229,GO:0050896,GO:0051301,GO:0070011,GO:0071554,GO:0071555,GO:0071704,GO:0071840,GO:0140096,GO:1901135,GO:1901564 3.4.16.4 0.000000000000000000000000000000000000001649 161.0
BYD3_k127_1539115_62 PFAM SNARE associated Golgi protein - - - 0.00000000000000000000000000000000000001396 152.0
BYD3_k127_1539115_63 Glycosyl transferase 4-like domain - - - 0.0000000000000000000000000000000000002857 154.0
BYD3_k127_1539115_64 transcriptional regulator - - - 0.00000000000000000000000000000000001059 147.0
BYD3_k127_1539115_65 Component of the thioredoxin-thioredoxin reductase system. Participates in various redox reactions through the reversible oxidation of its active center dithiol to a disulfide and catalyzes dithiol-disulfide exchange reactions (By similarity) K03671 GO:0003674,GO:0003824,GO:0004791,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009636,GO:0009987,GO:0015035,GO:0015036,GO:0016209,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0016671,GO:0019725,GO:0033554,GO:0034599,GO:0042221,GO:0042592,GO:0044424,GO:0044444,GO:0044464,GO:0045454,GO:0047134,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1990748 - 0.000000000000000000000000000000001092 133.0
BYD3_k127_1539115_66 bacterial (prokaryotic) histone like domain K03530 - - 0.00000000000000000000000000000001071 128.0
BYD3_k127_1539115_67 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995,K08744 - 2.7.8.41,2.7.8.5 0.000000000000000000000000000001287 127.0
BYD3_k127_1539115_68 Polymer-forming cytoskeletal - - - 0.000000000000000000000000000008555 126.0
BYD3_k127_1539115_69 PFAM O-methyltransferase - - - 0.0000000000000000000000000000761 124.0
BYD3_k127_1539115_7 3-beta hydroxysteroid dehydrogenase/isomerase family K01710,K08678 - 4.1.1.35,4.2.1.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000481 470.0
BYD3_k127_1539115_70 Protein of unknown function (DUF3810) - - - 0.0000000000000000000000004549 117.0
BYD3_k127_1539115_72 Necessary for formate dehydrogenase activity K02380 - - 0.0000000000000000002608 98.0
BYD3_k127_1539115_73 oxidoreductase activity - - - 0.000000000000000001063 100.0
BYD3_k127_1539115_74 - - - - 0.000000000000083 84.0
BYD3_k127_1539115_75 Transcriptional regulatory protein, C terminal K07669,K07672 - - 0.0000000000002421 75.0
BYD3_k127_1539115_77 methyltransferase - - - 0.000000000007518 74.0
BYD3_k127_1539115_78 Regulatory protein MerR - - - 0.000000000008609 72.0
BYD3_k127_1539115_79 COG4567 Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain K15012 - - 0.00000000001048 72.0
BYD3_k127_1539115_8 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 GO:0003674,GO:0003824,GO:0004853,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005161 443.0
BYD3_k127_1539115_80 cellulose-binding family II K01179 - 3.2.1.4 0.00000000002399 77.0
BYD3_k127_1539115_81 TPR repeat-containing protein - - - 0.000005356 59.0
BYD3_k127_1539115_82 - - - - 0.000005658 49.0
BYD3_k127_1539115_83 Histidine kinase-like ATPases - - - 0.00004116 48.0
BYD3_k127_1539115_84 Zinc dependent phospholipase C - - - 0.0003215 45.0
BYD3_k127_1539115_85 Flp Fap pilin component K02651 - - 0.000369 46.0
BYD3_k127_1539115_9 Bacterial sugar transferase K03606 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003596 441.0
BYD3_k127_1604302_0 Epoxide hydrolase N terminus - - - 1.308e-205 647.0
BYD3_k127_1604302_1 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 9.115e-205 666.0
BYD3_k127_1604302_10 Membrane dipeptidase (Peptidase family M19) K01273 - 3.4.13.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000815 436.0
BYD3_k127_1604302_11 Amidohydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008791 429.0
BYD3_k127_1604302_12 SMART Integrin alpha beta-propellor repeat protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005622 423.0
BYD3_k127_1604302_13 Belongs to the precorrin methyltransferase family K13542 - 2.1.1.107,4.2.1.75 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008974 420.0
BYD3_k127_1604302_14 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain K00609 - 2.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005703 396.0
BYD3_k127_1604302_15 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005252 398.0
BYD3_k127_1604302_16 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000139 374.0
BYD3_k127_1604302_17 Carboxypeptidase regulatory-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001272 401.0
BYD3_k127_1604302_18 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006449 364.0
BYD3_k127_1604302_19 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001171 346.0
BYD3_k127_1604302_2 Aminotransferase class-III K01845 - 5.4.3.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001539 509.0
BYD3_k127_1604302_20 Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor K00254 - 1.3.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003982 353.0
BYD3_k127_1604302_21 Endonuclease/Exonuclease/phosphatase family K01142 - 3.1.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001348 354.0
BYD3_k127_1604302_22 TonB-dependent receptor K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001836 352.0
BYD3_k127_1604302_23 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001717 316.0
BYD3_k127_1604302_24 zinc metalloprotease K11749 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001181 320.0
BYD3_k127_1604302_25 response regulator, receiver - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004563 306.0
BYD3_k127_1604302_26 Rhodanese Homology Domain K01011 - 2.8.1.1,2.8.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002641 299.0
BYD3_k127_1604302_27 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007512 299.0
BYD3_k127_1604302_28 peptidoglycan-binding protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004332 296.0
BYD3_k127_1604302_29 Enoyl-(Acyl carrier protein) reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006976 297.0
BYD3_k127_1604302_3 LOR/SDH bifunctional enzyme conserved region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005082 476.0
BYD3_k127_1604302_30 PFAM peptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006774 296.0
BYD3_k127_1604302_31 Belongs to the peptidase M48B family K03799 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001215 292.0
BYD3_k127_1604302_32 Histidine kinase K07683 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004835 295.0
BYD3_k127_1604302_33 PFAM Chlorite dismutase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002882 271.0
BYD3_k127_1604302_34 Protein of unknown function (DUF2400) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006778 272.0
BYD3_k127_1604302_35 TonB-dependent receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000648 287.0
BYD3_k127_1604302_36 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 - 2.5.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000009508 259.0
BYD3_k127_1604302_37 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.00000000000000000000000000000000000000000000000000000000000000000001683 250.0
BYD3_k127_1604302_38 Thioredoxin - - - 0.00000000000000000000000000000000000000000000000000000000000000000003003 244.0
BYD3_k127_1604302_39 Belongs to the sirtuin family. Class K12410 - - 0.00000000000000000000000000000000000000000000000000000000000000000004965 239.0
BYD3_k127_1604302_4 alkaline phosphatase K01113 - 3.1.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008615 470.0
BYD3_k127_1604302_40 Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant K02825 GO:0003674,GO:0003700,GO:0003824,GO:0004845,GO:0005575,GO:0005618,GO:0005623,GO:0006139,GO:0006220,GO:0006221,GO:0006355,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008655,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009889,GO:0009987,GO:0010468,GO:0010556,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019637,GO:0019693,GO:0030312,GO:0031323,GO:0031326,GO:0034641,GO:0034654,GO:0043094,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044464,GO:0046390,GO:0046483,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0055086,GO:0060255,GO:0065007,GO:0071704,GO:0071944,GO:0072527,GO:0072528,GO:0080090,GO:0090407,GO:0140110,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1903506,GO:2000112,GO:2001141 2.4.2.9 0.00000000000000000000000000000000000000000000000000000000000000000005819 237.0
BYD3_k127_1604302_41 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000003928 235.0
BYD3_k127_1604302_42 Outer membrane efflux protein K12340 - - 0.000000000000000000000000000000000000000000000000000000000000000005283 244.0
BYD3_k127_1604302_43 Peptidase M56, BlaR1 - - - 0.000000000000000000000000000000000000000000000000000000000000000005973 248.0
BYD3_k127_1604302_44 BlaR1 peptidase M56 - - - 0.00000000000000000000000000000000000000000000000000000000000000006104 243.0
BYD3_k127_1604302_45 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 - 4.1.1.23 0.000000000000000000000000000000000000000000000000000000000000001154 226.0
BYD3_k127_1604302_46 Polysaccharide lyase family 4, domain II - - - 0.00000000000000000000000000000000000000000000000000000000000000995 224.0
BYD3_k127_1604302_47 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.000000000000000000000000000000000000000000000000000000000007299 212.0
BYD3_k127_1604302_48 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.12 0.00000000000000000000000000000000000000000000000000000003952 208.0
BYD3_k127_1604302_49 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000000000000004651 197.0
BYD3_k127_1604302_5 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily K01465 - 3.5.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000659 460.0
BYD3_k127_1604302_50 Peptidase family M23 K21472 - - 0.000000000000000000000000000000000000000000000000000009 200.0
BYD3_k127_1604302_51 Cytochrome oxidase assembly protein K02259 - - 0.0000000000000000000000000000000000000000000000000000788 201.0
BYD3_k127_1604302_52 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.0000000000000000000000000000000000000000000000000002543 194.0
BYD3_k127_1604302_53 CoA binding domain K06929 - - 0.00000000000000000000000000000000000000000000002557 178.0
BYD3_k127_1604302_54 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.00000000000000000000000000000000000000000005722 172.0
BYD3_k127_1604302_55 Histone methylation protein DOT1 - - - 0.00000000000000000000000000000000000000000007535 164.0
BYD3_k127_1604302_56 PFAM von Willebrand factor type A - - - 0.000000000000000000000000000000000000000000358 171.0
BYD3_k127_1604302_57 Penicillinase repressor - - - 0.000000000000000000000000000000000000000003743 158.0
BYD3_k127_1604302_59 Penicillinase repressor - - - 0.000000000000000000000000000000000003851 143.0
BYD3_k127_1604302_6 Amino acid kinase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005326 451.0
BYD3_k127_1604302_60 Cytochrome C assembly protein - - - 0.000000000000000000000000000000000005305 149.0
BYD3_k127_1604302_61 Protein of unknown function (DUF420) K08976 - - 0.00000000000000000000000000000000002601 150.0
BYD3_k127_1604302_62 OmpA family K03640 - - 0.00000000000000000000000000000000003513 138.0
BYD3_k127_1604302_63 - - - - 0.000000000000000000000000000000001181 134.0
BYD3_k127_1604302_64 - - - - 0.000000000000000000000000000001087 124.0
BYD3_k127_1604302_65 Phosphatidate cytidylyltransferase K00981 - 2.7.7.41 0.00000000000000000000000000001155 128.0
BYD3_k127_1604302_66 Glycosyl transferases group 1 K19424 - - 0.00000000000000000000000000001872 132.0
BYD3_k127_1604302_67 TIGRFAM diguanylate cyclase (GGDEF) domain - - - 0.00000000000000000000000000007066 130.0
BYD3_k127_1604302_68 PFAM von Willebrand factor type A - - - 0.000000000000000000000000008031 122.0
BYD3_k127_1604302_69 PFAM Antibiotic biosynthesis monooxygenase - - - 0.0000000000000000000000001716 109.0
BYD3_k127_1604302_7 Belongs to the aspartokinase family K00928 - 2.7.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004037 441.0
BYD3_k127_1604302_70 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.0000000000000000000001286 103.0
BYD3_k127_1604302_71 Frataxin-like domain K06202 - - 0.0000000000000000000001941 102.0
BYD3_k127_1604302_72 BON domain - - - 0.000000000000000000001913 106.0
BYD3_k127_1604302_73 Sulfatase K01133 - 3.1.6.6 0.000000000000000000003216 109.0
BYD3_k127_1604302_74 Response regulator receiver - - - 0.00000000000000008945 88.0
BYD3_k127_1604302_75 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.000000000000004109 87.0
BYD3_k127_1604302_77 von Willebrand factor, type A K07114 - - 0.00000000000003818 84.0
BYD3_k127_1604302_78 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 - - 0.0000000000001122 73.0
BYD3_k127_1604302_79 Lysylphosphatidylglycerol synthase TM region - - - 0.000000000000278 81.0
BYD3_k127_1604302_8 Belongs to the ALAD family K01698 - 4.2.1.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006181 428.0
BYD3_k127_1604302_81 dockerin type - - - 0.00000001633 66.0
BYD3_k127_1604302_82 oxidoreductase activity - - - 0.00000004805 67.0
BYD3_k127_1604302_83 Helix-turn-helix domain K15539 - - 0.0000001527 60.0
BYD3_k127_1604302_84 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter K02116 - - 0.00003243 50.0
BYD3_k127_1604302_85 Angiotensin-converting enzyme K01283 - 3.4.15.1 0.00003666 47.0
BYD3_k127_1604302_86 N-methylation of lysine residues in flagellin K00599 K18475 - - 0.0007335 51.0
BYD3_k127_1604302_9 PFAM Fatty acid desaturase K00507 - 1.14.19.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000721 423.0
BYD3_k127_1652215_0 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002698 538.0
BYD3_k127_1652215_1 ATPase activity K02013,K02028,K05776 GO:0000166,GO:0003674,GO:0005488,GO:0005524,GO:0008144,GO:0017076,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0097159,GO:0097367,GO:1901265,GO:1901363 3.6.3.21,3.6.3.34 0.0000000000000000000000000000000000000000000000000000000000000000146 229.0
BYD3_k127_1747277_0 Beta-ketoacyl synthase, C-terminal domain - - - 3.252e-284 972.0
BYD3_k127_1747277_1 Transketolase, pyrimidine binding domain K00615 - 2.2.1.1 4.162e-239 764.0
BYD3_k127_1747277_10 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K13015 - 1.1.1.136 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002863 565.0
BYD3_k127_1747277_100 oligosaccharyl transferase activity - - - 0.0000000000000000000000000000000000000000000000000000000009421 220.0
BYD3_k127_1747277_101 GSCFA family - - - 0.00000000000000000000000000000000000000000000000000000000219 213.0
BYD3_k127_1747277_102 Methionine biosynthesis protein MetW K18827 - 2.1.1.294,2.7.1.181 0.00000000000000000000000000000000000000000000000000000001132 214.0
BYD3_k127_1747277_103 NmrA-like family - - - 0.00000000000000000000000000000000000000000000000000000009695 209.0
BYD3_k127_1747277_104 Type II secretion system (T2SS), protein F K12511 - - 0.0000000000000000000000000000000000000000000000000000007968 203.0
BYD3_k127_1747277_105 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000001039 200.0
BYD3_k127_1747277_106 Type II secretion system K12510 - - 0.000000000000000000000000000000000000000000000000000001173 203.0
BYD3_k127_1747277_107 PFAM Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000008879 200.0
BYD3_k127_1747277_108 PFAM GGDEF domain containing protein - - - 0.00000000000000000000000000000000000000000000000000009157 206.0
BYD3_k127_1747277_109 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000001493 199.0
BYD3_k127_1747277_11 UDP-N-acetylglucosamine 2-epimerase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008142 568.0
BYD3_k127_1747277_110 Cytidylyltransferase K00983 - 2.7.7.43 0.00000000000000000000000000000000000000000000000001544 187.0
BYD3_k127_1747277_111 Polysaccharide biosynthesis/export protein K01991 - - 0.00000000000000000000000000000000000000000000002451 178.0
BYD3_k127_1747277_112 Sodium:sulfate symporter transmembrane region K14445 - - 0.0000000000000000000000000000000000000000000002414 185.0
BYD3_k127_1747277_113 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000003251 184.0
BYD3_k127_1747277_114 Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene K03664 - - 0.0000000000000000000000000000000000000000000003406 177.0
BYD3_k127_1747277_115 DNA polymerase III K02341 - 2.7.7.7 0.0000000000000000000000000000000000000000000004088 179.0
BYD3_k127_1747277_116 PFAM Glycosyl transferase family 2 K07011 - - 0.0000000000000000000000000000000000000000000004618 182.0
BYD3_k127_1747277_117 ABC-2 type transporter K09690 - - 0.000000000000000000000000000000000000000000001067 176.0
BYD3_k127_1747277_118 RmlD substrate binding domain K00067 - 1.1.1.133 0.000000000000000000000000000000000000000000002368 175.0
BYD3_k127_1747277_119 IPT/TIG domain - - - 0.00000000000000000000000000000000000000000000484 185.0
BYD3_k127_1747277_12 PFAM glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004197 569.0
BYD3_k127_1747277_121 polysaccharide deacetylase - - - 0.000000000000000000000000000000000000000000005856 175.0
BYD3_k127_1747277_122 Peptidase MA superfamily - - - 0.0000000000000000000000000000000000000003446 164.0
BYD3_k127_1747277_123 Polysaccharide biosynthesis protein K03328 - - 0.00000000000000000000000000000000000006826 160.0
BYD3_k127_1747277_124 Tyrosine protein kinase K00903 - 2.7.10.2 0.0000000000000000000000000000000000001114 154.0
BYD3_k127_1747277_125 Thioredoxin K03672 - 1.8.1.8 0.0000000000000000000000000000000000001198 147.0
BYD3_k127_1747277_126 Formyl transferase - - - 0.000000000000000000000000000000000001978 152.0
BYD3_k127_1747277_127 COGs COG1629 Outer membrane receptor protein mostly Fe transport K02014 - - 0.000000000000000000000000000000000003468 160.0
BYD3_k127_1747277_128 Polysaccharide deacetylase - - - 0.00000000000000000000000000000000001171 153.0
BYD3_k127_1747277_129 TonB-dependent receptor - - - 0.0000000000000000000000000000000002626 153.0
BYD3_k127_1747277_13 UDP-N-acetylglucosamine 2-epimerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005247 531.0
BYD3_k127_1747277_130 - - - - 0.0000000000000000000000000000000011 141.0
BYD3_k127_1747277_131 PFAM DoxX K15977 - - 0.00000000000000000000000000002463 128.0
BYD3_k127_1747277_132 Methyltransferase FkbM domain - - - 0.0000000000000000000000000000329 128.0
BYD3_k127_1747277_133 PKD domain containing protein - - - 0.00000000000000000000000000003969 133.0
BYD3_k127_1747277_134 pyridoxamine 5-phosphate - - - 0.00000000000000000000000000008979 121.0
BYD3_k127_1747277_135 Acetyltransferase (GNAT) domain K00657 - 2.3.1.57 0.00000000000000000000000000009509 124.0
BYD3_k127_1747277_136 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.0000000000000000000000000004727 122.0
BYD3_k127_1747277_137 PFAM von Willebrand factor type A - - - 0.0000000000000000000000000005478 132.0
BYD3_k127_1747277_138 glycosyl transferase group 1 - - - 0.000000000000000000000000003464 123.0
BYD3_k127_1747277_139 Belongs to the P-Pant transferase superfamily K06133 - - 0.000000000000000000000000003467 121.0
BYD3_k127_1747277_14 UDP-N-acetylglucosamine 2-epimerase K08068,K18429 - 3.2.1.183,3.2.1.184 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007517 526.0
BYD3_k127_1747277_140 Glycosyltransferase like family 2 - - - 0.000000000000000000000000005225 129.0
BYD3_k127_1747277_141 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.000000000000000000000000006746 127.0
BYD3_k127_1747277_143 Vitamin K-dependent gamma-carboxylase - - - 0.00000000000000000000000001714 121.0
BYD3_k127_1747277_144 oligosaccharyl transferase activity - - - 0.0000000000000000000000000269 123.0
BYD3_k127_1747277_145 Tetratricopeptide repeat - - - 0.00000000000000000000000002701 118.0
BYD3_k127_1747277_146 Macrocin-O-methyltransferase (TylF) - - - 0.00000000000000000000000004096 117.0
BYD3_k127_1747277_147 DinB superfamily - - - 0.00000000000000000000000009973 113.0
BYD3_k127_1747277_148 - - - - 0.0000000000000000000000001087 117.0
BYD3_k127_1747277_149 - - - - 0.0000000000000000000000001143 117.0
BYD3_k127_1747277_15 AMP-binding enzyme C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009955 532.0
BYD3_k127_1747277_151 PKD domain containing protein - - - 0.0000000000000000000000005466 121.0
BYD3_k127_1747277_152 von Willebrand factor, type A - - - 0.000000000000000000000001036 121.0
BYD3_k127_1747277_153 AAA domain K02282 - - 0.000000000000000000000001788 117.0
BYD3_k127_1747277_154 Methyltransferase FkbM domain - - - 0.000000000000000000000002653 120.0
BYD3_k127_1747277_156 Methionine biosynthesis protein MetW - - - 0.000000000000000000000009783 113.0
BYD3_k127_1747277_158 Belongs to the GPAT DAPAT family K00631 - 2.3.1.15 0.00000000000000000000008457 111.0
BYD3_k127_1747277_16 type II secretion system protein E K02283,K20527 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004368 524.0
BYD3_k127_1747277_160 Phosphotransferase enzyme family - - - 0.0000000000000000000002524 109.0
BYD3_k127_1747277_161 Putative Flp pilus-assembly TadE/G-like - - - 0.0000000000000000000007866 109.0
BYD3_k127_1747277_162 - - - - 0.000000000000000000002894 104.0
BYD3_k127_1747277_163 - - - - 0.000000000000000000002995 102.0
BYD3_k127_1747277_165 alpha/beta hydrolase fold - - - 0.000000000000000000007749 103.0
BYD3_k127_1747277_166 Methionine biosynthesis protein MetW - - - 0.000000000000000000009697 104.0
BYD3_k127_1747277_167 PFAM Prenyltransferase squalene oxidase K06045 - 4.2.1.129,5.4.99.17 0.00000000000000000001388 102.0
BYD3_k127_1747277_168 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.00000000000000000002347 92.0
BYD3_k127_1747277_169 acyl carrier protein - - - 0.00000000000000000003317 92.0
BYD3_k127_1747277_17 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001339 524.0
BYD3_k127_1747277_171 - - - - 0.0000000000000000006183 97.0
BYD3_k127_1747277_172 Cupin 2, conserved barrel domain protein K16953,K19547 - 4.4.1.3,5.3.3.19 0.0000000000000000007389 98.0
BYD3_k127_1747277_173 Macrocin-O-methyltransferase (TylF) - - - 0.000000000000000001927 99.0
BYD3_k127_1747277_174 Methyltransferase - - - 0.0000000000000002306 89.0
BYD3_k127_1747277_175 Lysylphosphatidylglycerol synthase TM region - - - 0.0000000000000003025 90.0
BYD3_k127_1747277_176 Belongs to the peptidase S8 family - - - 0.0000000000000003752 92.0
BYD3_k127_1747277_177 - - - - 0.0000000000000008426 88.0
BYD3_k127_1747277_179 Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC - - - 0.00000000000000446 88.0
BYD3_k127_1747277_18 Male sterility protein K01710,K01784,K12450 - 4.2.1.46,4.2.1.76,5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001118 486.0
BYD3_k127_1747277_180 cheY-homologous receiver domain - - - 0.00000000000001085 81.0
BYD3_k127_1747277_181 Tetratricopeptide repeat - - - 0.00000000000001913 84.0
BYD3_k127_1747277_182 Transmembrane exosortase (Exosortase_EpsH) - - - 0.00000000000003191 84.0
BYD3_k127_1747277_183 Protein conserved in bacteria - - - 0.00000000000004258 81.0
BYD3_k127_1747277_184 Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S K03149 - 2.8.1.10 0.00000000000005203 79.0
BYD3_k127_1747277_185 Methyltransferase domain - - - 0.0000000000000897 83.0
BYD3_k127_1747277_186 Methyltransferase domain - - - 0.0000000000001509 81.0
BYD3_k127_1747277_187 - - - - 0.0000000000002517 74.0
BYD3_k127_1747277_188 COG0457 FOG TPR repeat - - - 0.000000000000319 83.0
BYD3_k127_1747277_189 Methyltransferase FkbM domain - - - 0.0000000000004662 79.0
BYD3_k127_1747277_19 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001986 490.0
BYD3_k127_1747277_191 Winged helix-turn-helix DNA-binding - - - 0.000000000003663 75.0
BYD3_k127_1747277_192 Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC - - - 0.00000000000564 79.0
BYD3_k127_1747277_193 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose - - - 0.000000000007355 74.0
BYD3_k127_1747277_194 Protein of unknown function (DUF1565) - - - 0.00000000001204 77.0
BYD3_k127_1747277_195 Protein of unknown function (DUF1566) - - - 0.00000000004023 73.0
BYD3_k127_1747277_196 - - - - 0.00000000006195 74.0
BYD3_k127_1747277_197 - - - - 0.000000000417 65.0
BYD3_k127_1747277_198 Glucose / Sorbosone dehydrogenase - - - 0.0000000005932 72.0
BYD3_k127_1747277_199 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.0000000006326 72.0
BYD3_k127_1747277_2 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit - - - 7.055e-226 704.0
BYD3_k127_1747277_20 Pirin C-terminal cupin domain K06911 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005922 481.0
BYD3_k127_1747277_200 - - - - 0.000000000756 68.0
BYD3_k127_1747277_201 Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC - - - 0.000000001101 71.0
BYD3_k127_1747277_202 Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC - - - 0.000000001887 70.0
BYD3_k127_1747277_203 Domain of unknown function (DUF4149) - - - 0.000000002867 67.0
BYD3_k127_1747277_204 Belongs to the peptidase S8 family - - - 0.000000005936 68.0
BYD3_k127_1747277_205 Glycosyltransferase family 87 - - - 0.00000001003 67.0
BYD3_k127_1747277_206 Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC - - - 0.00000001901 68.0
BYD3_k127_1747277_208 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase - - - 0.00000006446 66.0
BYD3_k127_1747277_209 Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC - - - 0.0000001198 64.0
BYD3_k127_1747277_21 SPTR N-acetylneuraminic acid synthase, N-terminal domain protein K01654 - 2.5.1.56 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005305 479.0
BYD3_k127_1747277_210 Helix-turn-helix domain K15539 - - 0.0000001292 63.0
BYD3_k127_1747277_211 - - - - 0.0000001432 64.0
BYD3_k127_1747277_212 Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC - - - 0.000000418 64.0
BYD3_k127_1747277_213 Monogalactosyldiacylglycerol (MGDG) synthase - - - 0.0000009141 62.0
BYD3_k127_1747277_214 - - - - 0.000001323 57.0
BYD3_k127_1747277_215 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) - - - 0.000001725 61.0
BYD3_k127_1747277_216 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) - - - 0.000004135 59.0
BYD3_k127_1747277_217 Flp/Fap pilin component K02651 - - 0.0000076 51.0
BYD3_k127_1747277_218 Methionine biosynthesis protein MetW - - - 0.00001325 57.0
BYD3_k127_1747277_219 DUF218 domain - - - 0.00002915 54.0
BYD3_k127_1747277_22 COGs COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002711 477.0
BYD3_k127_1747277_220 Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC - - - 0.00003636 57.0
BYD3_k127_1747277_221 2OG-Fe(II) oxygenase superfamily K15429 - 2.1.1.228 0.00005395 55.0
BYD3_k127_1747277_222 diguanylate cyclase - - - 0.00005494 56.0
BYD3_k127_1747277_223 spectrin binding K21440 - - 0.0001355 51.0
BYD3_k127_1747277_224 O-Antigen ligase - - - 0.0001998 54.0
BYD3_k127_1747277_225 HTTM domain protein - - - 0.0002981 54.0
BYD3_k127_1747277_23 Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose K01711 - 4.2.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003199 472.0
BYD3_k127_1747277_24 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001909 475.0
BYD3_k127_1747277_25 PFAM Peptidase M1, membrane alanine aminopeptidase K01256 - 3.4.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001124 486.0
BYD3_k127_1747277_26 Alcohol dehydrogenase GroES-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004853 466.0
BYD3_k127_1747277_27 PFAM 2-nitropropane dioxygenase NPD K00459 - 1.13.12.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005928 449.0
BYD3_k127_1747277_28 Isocitrate/isopropylmalate dehydrogenase K00030 - 1.1.1.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001209 445.0
BYD3_k127_1747277_29 Peptidase family M28 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005554 450.0
BYD3_k127_1747277_3 Phosphate acyltransferases K01897 - 6.2.1.3 7.154e-224 721.0
BYD3_k127_1747277_30 Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction K02377 - 1.1.1.271 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001897 449.0
BYD3_k127_1747277_31 Asparagine synthase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002431 444.0
BYD3_k127_1747277_32 DegT/DnrJ/EryC1/StrS aminotransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004944 432.0
BYD3_k127_1747277_33 flavin-nucleotide-binding protein structurally related to pyridoxine 5-phosphate oxidase K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005911 426.0
BYD3_k127_1747277_34 Belongs to the UDP-N-acetylglucosamine 2-epimerase family K01791,K13019 - 5.1.3.14,5.1.3.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002904 423.0
BYD3_k127_1747277_35 NHL repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000266 415.0
BYD3_k127_1747277_36 PFAM glycosyl transferase family 51 K05366,K21464 - 2.4.1.129,3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000278 429.0
BYD3_k127_1747277_37 Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007249 403.0
BYD3_k127_1747277_38 PFAM glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001161 408.0
BYD3_k127_1747277_39 4,5-dihydroxyphthalate decarboxylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002124 394.0
BYD3_k127_1747277_4 Belongs to the transketolase family K00615 - 2.2.1.1 1.024e-219 700.0
BYD3_k127_1747277_40 PFAM AAA ATPase central domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005712 391.0
BYD3_k127_1747277_41 NeuB family K01654 - 2.5.1.56 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001245 397.0
BYD3_k127_1747277_42 Non-ribosomal peptide synthetase modules and related proteins K13611,K13614,K15654 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003703 424.0
BYD3_k127_1747277_43 Shikimate dehydrogenase substrate binding domain K00014 - 1.1.1.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002641 372.0
BYD3_k127_1747277_44 DEAD-like helicases superfamily K11927 - 3.6.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004248 380.0
BYD3_k127_1747277_45 Thiazole biosynthesis protein ThiG K03149 GO:0003674,GO:0003824,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.8.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006257 370.0
BYD3_k127_1747277_46 NAD(P)H-binding K17947 - 5.1.3.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001812 372.0
BYD3_k127_1747277_47 Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. Also shows phosphatase, 2'- nucleotidase and 2',3'-cyclic phosphodiesterase activities. These phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases K00974 - 2.7.7.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000303 385.0
BYD3_k127_1747277_48 FemAB family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004614 366.0
BYD3_k127_1747277_49 Heparinase II/III-like protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009126 374.0
BYD3_k127_1747277_5 ethanolamine utilization protein K04019 GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0019538,GO:0030091,GO:0043085,GO:0043170,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0050790,GO:0051339,GO:0051349,GO:0065007,GO:0065009,GO:0071704,GO:1901564 - 5.964e-213 674.0
BYD3_k127_1747277_50 cytidylyl-transferase K00983 - 2.7.7.43 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003087 348.0
BYD3_k127_1747277_51 TIGRFAM exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008136 355.0
BYD3_k127_1747277_52 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001262 349.0
BYD3_k127_1747277_53 HD domain K07814 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006253 345.0
BYD3_k127_1747277_54 TIGRFAM polysaccharide deactylase family protein, PEP-CTERM locus subfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002889 340.0
BYD3_k127_1747277_55 succinyl-diaminopimelate desuccinylase activity K01438 - 3.5.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001246 340.0
BYD3_k127_1747277_56 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002215 343.0
BYD3_k127_1747277_57 Polysaccharide pyruvyl transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001966 331.0
BYD3_k127_1747277_58 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001492 331.0
BYD3_k127_1747277_59 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007524 326.0
BYD3_k127_1747277_6 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01916 - 6.3.1.5 3.213e-205 652.0
BYD3_k127_1747277_60 pyrroloquinoline quinone binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004216 316.0
BYD3_k127_1747277_61 PFAM Glycosyl transferase family 4 K02851 - 2.7.8.33,2.7.8.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005791 312.0
BYD3_k127_1747277_62 Dihydrodipicolinate reductase, N-terminus K21672 - 1.4.1.12,1.4.1.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004496 295.0
BYD3_k127_1747277_63 Catalyzes the conversion of S-adenosyl-L-methionine (SAM) to carboxy-S-adenosyl-L-methionine (Cx-SAM) K15256 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000371 283.0
BYD3_k127_1747277_64 WbqC-like protein family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007402 284.0
BYD3_k127_1747277_65 Dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007462 283.0
BYD3_k127_1747277_66 Proline dehydrogenase K00318 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004452 283.0
BYD3_k127_1747277_67 Domain of unknown function (DUF362) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009794 278.0
BYD3_k127_1747277_68 arylsulfatase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003518 287.0
BYD3_k127_1747277_69 Radical SAM domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001261 270.0
BYD3_k127_1747277_7 Belongs to the aldehyde dehydrogenase family K00128,K00135,K22187 - 1.2.1.16,1.2.1.20,1.2.1.3,1.2.1.79 1.902e-194 621.0
BYD3_k127_1747277_70 Putative diguanylate phosphodiesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003127 273.0
BYD3_k127_1747277_71 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000065 282.0
BYD3_k127_1747277_72 Bacterial regulatory protein, Fis family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000009812 264.0
BYD3_k127_1747277_73 ABC-type polysaccharide polyol phosphate transport system ATPase component K09691 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001043 267.0
BYD3_k127_1747277_74 PFAM class II aldolase adducin family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003195 258.0
BYD3_k127_1747277_75 FAD dependent oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005099 261.0
BYD3_k127_1747277_76 Pyridoxal phosphate biosynthetic protein PdxA K00097,K22024 - 1.1.1.262,1.1.1.408,1.1.1.409 0.0000000000000000000000000000000000000000000000000000000000000000000000008165 257.0
BYD3_k127_1747277_77 Class ii aldolase K01628 - 4.1.2.17 0.000000000000000000000000000000000000000000000000000000000000000000000001349 251.0
BYD3_k127_1747277_78 cAMP biosynthetic process K03641 - - 0.000000000000000000000000000000000000000000000000000000000000000000000004533 266.0
BYD3_k127_1747277_79 TonB-dependent receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001884 273.0
BYD3_k127_1747277_8 negative regulation of protein lipidation K19294 - - 3.648e-194 635.0
BYD3_k127_1747277_80 Threonine dehydratase K01754 - 4.3.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000002268 254.0
BYD3_k127_1747277_81 Lipopolysaccharide biosynthesis protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003537 261.0
BYD3_k127_1747277_82 Bacterial regulatory protein, Fis family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000006039 254.0
BYD3_k127_1747277_83 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002382 262.0
BYD3_k127_1747277_84 Belongs to the GSP D family K02280 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002556 248.0
BYD3_k127_1747277_85 exo-alpha-(2->6)-sialidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004211 256.0
BYD3_k127_1747277_86 Sigma-54 interaction domain K02481 - - 0.0000000000000000000000000000000000000000000000000000000000000000000008665 250.0
BYD3_k127_1747277_87 Cytochrome c - - - 0.00000000000000000000000000000000000000000000000000000000000000000004703 237.0
BYD3_k127_1747277_88 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000005314 246.0
BYD3_k127_1747277_89 Glycosyl transferase family group 2 K07011 - - 0.00000000000000000000000000000000000000000000000000000000000000000009777 242.0
BYD3_k127_1747277_9 Asparagine synthase K01953 - 6.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001576 581.0
BYD3_k127_1747277_90 Belongs to the bacterial glucokinase family K00845 - 2.7.1.2 0.0000000000000000000000000000000000000000000000000000000000000000006249 240.0
BYD3_k127_1747277_91 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.00000000000000000000000000000000000000000000000000000000000000001288 249.0
BYD3_k127_1747277_92 Glycosyl transferase, family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000001409 232.0
BYD3_k127_1747277_93 Glycosyltransferase Family 4 - - - 0.0000000000000000000000000000000000000000000000000000000000000003078 243.0
BYD3_k127_1747277_94 O-Antigen ligase - - - 0.0000000000000000000000000000000000000000000000000000000000000006574 236.0
BYD3_k127_1747277_95 PFAM glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000001706 227.0
BYD3_k127_1747277_96 haloacid dehalogenase-like hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000005107 225.0
BYD3_k127_1747277_97 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) - - - 0.00000000000000000000000000000000000000000000000000000000000003021 229.0
BYD3_k127_1747277_98 AAA domain - - - 0.0000000000000000000000000000000000000000000000000000000000007804 222.0
BYD3_k127_1747277_99 Cytidylyltransferase K00983 - 2.7.7.43 0.00000000000000000000000000000000000000000000000000000000006475 213.0
BYD3_k127_1768168_0 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate K01681 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003730,GO:0003824,GO:0003994,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006081,GO:0006082,GO:0006091,GO:0006097,GO:0006099,GO:0006101,GO:0006629,GO:0006631,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009060,GO:0009061,GO:0009987,GO:0015980,GO:0016829,GO:0016835,GO:0016836,GO:0016999,GO:0017144,GO:0019541,GO:0019679,GO:0019752,GO:0032787,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044255,GO:0044262,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045333,GO:0046459,GO:0046487,GO:0046872,GO:0046914,GO:0047456,GO:0048037,GO:0050896,GO:0051536,GO:0051539,GO:0051540,GO:0055114,GO:0071704,GO:0072350,GO:0097159,GO:1901363 4.2.1.3 0.0 1168.0
BYD3_k127_1768168_1 Heat shock 70 kDa protein K04043 - - 4.914e-294 913.0
BYD3_k127_1768168_10 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001341 370.0
BYD3_k127_1768168_11 PFAM Peptidase M16 inactive domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004683 332.0
BYD3_k127_1768168_12 YmdB-like protein K09769 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000474 318.0
BYD3_k127_1768168_13 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K18979 GO:0003674,GO:0003824,GO:0006091,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008616,GO:0009055,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0016491,GO:0018130,GO:0019438,GO:0022900,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0052693,GO:0055086,GO:0055114,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 1.17.99.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001934 317.0
BYD3_k127_1768168_14 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007638 316.0
BYD3_k127_1768168_15 ATPases associated with a variety of cellular activities K05847 GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0015695,GO:0015696,GO:0015697,GO:0015838,GO:0031460,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0072337 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001161 306.0
BYD3_k127_1768168_16 Peptidase, M16 K07263 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003967 306.0
BYD3_k127_1768168_17 Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin K01151 - 3.1.21.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002206 282.0
BYD3_k127_1768168_18 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 GO:0003674,GO:0005488,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008289,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0019637,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.4.1.182 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002325 283.0
BYD3_k127_1768168_19 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004346 269.0
BYD3_k127_1768168_2 Peptidase family M49 - - - 3.466e-240 755.0
BYD3_k127_1768168_20 FtsJ-like methyltransferase K06442 - 2.1.1.226,2.1.1.227 0.000000000000000000000000000000000000000000000000000000000000000000000000000001877 273.0
BYD3_k127_1768168_21 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001422 267.0
BYD3_k127_1768168_22 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 GO:0000166,GO:0003674,GO:0003824,GO:0003951,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006741,GO:0006753,GO:0006766,GO:0006767,GO:0006769,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008976,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009820,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016776,GO:0017076,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043603,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046496,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0051287,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:0097159,GO:0097367,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.7.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000002225 262.0
BYD3_k127_1768168_23 Polyprenyl synthetase K00795,K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.000000000000000000000000000000000000000000000000000000000000000000000005713 253.0
BYD3_k127_1768168_24 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.0000000000000000000000000000000000000000000000000000000000000000008202 241.0
BYD3_k127_1768168_25 HD domain - - - 0.00000000000000000000000000000000000000000000000000000000000002678 233.0
BYD3_k127_1768168_26 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 - - 0.0000000000000000000000000000000000000000000000000000000000009303 216.0
BYD3_k127_1768168_27 serine threonine protein kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000005608 229.0
BYD3_k127_1768168_28 Memo-like protein K06990 - - 0.00000000000000000000000000000000000000000000000000000009192 206.0
BYD3_k127_1768168_29 LexA-binding, inner membrane-associated putative hydrolase K07038 - - 0.0000000000000000000000000000000000000000000000000000001597 205.0
BYD3_k127_1768168_3 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 8.919e-222 706.0
BYD3_k127_1768168_30 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.000000000000000000000000000000000000000000000000000005688 204.0
BYD3_k127_1768168_31 PFAM AMMECR1 domain protein K09141 - - 0.000000000000000000000000000000000000000000000000000248 194.0
BYD3_k127_1768168_32 protein phosphatase 2C domain protein K20074 - 3.1.3.16 0.00000000000000000000000000000000000000000000000002644 188.0
BYD3_k127_1768168_33 - - - - 0.0000000000000000000000000000000000000000000000003157 188.0
BYD3_k127_1768168_34 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.0000000000000000000000000000000000000000002454 169.0
BYD3_k127_1768168_35 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000000000000000000000000000003932 152.0
BYD3_k127_1768168_36 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 - - 0.000000000000000000000000000000000001563 142.0
BYD3_k127_1768168_37 Cytochrome c - - - 0.000000000000000000000000001946 122.0
BYD3_k127_1768168_38 Peptidase family M23 K21471 - - 0.000000000000000000000000075 122.0
BYD3_k127_1768168_39 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 GO:0000966,GO:0000967,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 - 0.000000000000000000002228 98.0
BYD3_k127_1768168_4 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008748 576.0
BYD3_k127_1768168_40 Belongs to the bacterial ribosomal protein bL35 family K02916 - - 0.00000000000000002155 84.0
BYD3_k127_1768168_41 3D domain - - - 0.000000000000003014 84.0
BYD3_k127_1768168_42 - - - - 0.000000000002186 75.0
BYD3_k127_1768168_43 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.000000000002345 70.0
BYD3_k127_1768168_44 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.00000000001071 69.0
BYD3_k127_1768168_45 Belongs to the peptidase M10A family K07761,K07999 GO:0001101,GO:0003674,GO:0003824,GO:0004175,GO:0004222,GO:0005575,GO:0005623,GO:0005886,GO:0006508,GO:0006807,GO:0006950,GO:0006970,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009628,GO:0009651,GO:0009719,GO:0009725,GO:0009753,GO:0010033,GO:0010035,GO:0010038,GO:0016020,GO:0016787,GO:0019538,GO:0031224,GO:0031225,GO:0032502,GO:0040007,GO:0042221,GO:0043170,GO:0044238,GO:0044425,GO:0044464,GO:0046686,GO:0048519,GO:0048580,GO:0048583,GO:0048589,GO:0048831,GO:0050789,GO:0050793,GO:0050896,GO:0051093,GO:0051239,GO:0051241,GO:0065007,GO:0070011,GO:0071704,GO:0071944,GO:0080186,GO:0140096,GO:1900055,GO:1900056,GO:1901564,GO:1901700,GO:1905622,GO:2000024,GO:2000026,GO:2000028,GO:2000241 - 0.00000000002521 76.0
BYD3_k127_1768168_46 - - - - 0.00000000005233 70.0
BYD3_k127_1768168_47 Hsp20/alpha crystallin family K13993 - - 0.00000000005928 70.0
BYD3_k127_1768168_48 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.0000000003181 67.0
BYD3_k127_1768168_49 Tfp pilus assembly protein FimV - - - 0.0000000006496 68.0
BYD3_k127_1768168_5 Substrate binding domain of ABC-type glycine betaine transport system K05845,K05846 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007498 565.0
BYD3_k127_1768168_50 DNA-directed 5'-3' RNA polymerase activity K03060 GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0030312,GO:0030880,GO:0032774,GO:0032991,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0040007,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0061695,GO:0071704,GO:0071944,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990234 2.7.7.6 0.0003898 47.0
BYD3_k127_1768168_51 - - - - 0.000393 48.0
BYD3_k127_1768168_6 Dehydrogenase K00117 - 1.1.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000656 500.0
BYD3_k127_1768168_7 Belongs to the 5'-nucleotidase family K01081 - 3.1.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001689 449.0
BYD3_k127_1768168_8 phenylalanyl-tRNA synthetase (beta subunit) K01890 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 6.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001426 451.0
BYD3_k127_1768168_9 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601,K03797 - 3.1.11.6,3.4.21.102 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007559 385.0
BYD3_k127_1773038_0 PFAM MotA TolQ ExbB proton channel K03561 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009883 273.0
BYD3_k127_1773038_1 TonB dependent biopolymer transporter integral cytoplasmic membrane subunit, working with ExbB K03559 - - 0.00000000000000000000000000000000000000000000000003489 182.0
BYD3_k127_1773038_2 Biopolymer K03559 - - 0.000000000000000000000000000000000000008186 150.0
BYD3_k127_1773038_3 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.0000000000000001926 80.0
BYD3_k127_1773038_4 Tetratricopeptide repeat - - - 0.000000000003932 77.0
BYD3_k127_1813653_1 GYD domain - - - 0.000000000000000000000000000000000000000000000000000006011 199.0
BYD3_k127_1813653_2 - - - - 0.0000000000582 64.0
BYD3_k127_1962032_0 MacB-like periplasmic core domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001103 314.0
BYD3_k127_1962954_0 Belongs to the glutamate synthase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005954 480.0
BYD3_k127_1962954_1 DinB family - - - 0.0000000000000000000000000000000000000000000000001982 181.0
BYD3_k127_1962954_2 lactoylglutathione lyase activity K08234 - - 0.00000000000000000000000000000000000000000199 159.0
BYD3_k127_1962954_3 Antibiotic biosynthesis monooxygenase - - - 0.00000000000000000000000000000000006459 135.0
BYD3_k127_1974212_0 Transcriptional regulatory protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001528 362.0
BYD3_k127_1974212_1 peptidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001467 351.0
BYD3_k127_1974212_10 Transposase - - - 0.000000000000000000000000000000000000000000000000000000001755 213.0
BYD3_k127_1974212_11 Putative heavy-metal-binding - - - 0.00000000000000000000000000000000000000000000000002599 181.0
BYD3_k127_1974212_12 Domain of unknown function (DUF697) - - - 0.00000000000000000000000000000000000000000000000005171 194.0
BYD3_k127_1974212_13 CAAX protease self-immunity - - - 0.000000000000000000000000000000000000000000000002286 183.0
BYD3_k127_1974212_14 Haloacid dehalogenase-like hydrolase K07025 - - 0.000000000000000000000000000000000000000000000008477 180.0
BYD3_k127_1974212_15 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.0000000000000000000000000000000000000000000000359 172.0
BYD3_k127_1974212_16 - - - - 0.00000000000000000000000000000000000000000007008 166.0
BYD3_k127_1974212_17 glyoxalase bleomycin resistance protein dioxygenase - - - 0.00000000000000000000000000000000000000001365 157.0
BYD3_k127_1974212_18 - - - - 0.00000000000000000000000000000000000000003342 159.0
BYD3_k127_1974212_19 Domain of unknown function (DU1801) - - - 0.000000000000000000000000000000000000001051 150.0
BYD3_k127_1974212_2 dihydrofolate reductase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006092 312.0
BYD3_k127_1974212_20 - - - - 0.0000000000000000000000000000000001429 137.0
BYD3_k127_1974212_21 - - - - 0.000000000000000000000000000001077 131.0
BYD3_k127_1974212_22 Phosphotransferase enzyme family - - - 0.0000000000000000000000000003444 126.0
BYD3_k127_1974212_23 DinB family - - - 0.000000000000000000000000007581 116.0
BYD3_k127_1974212_24 lactoylglutathione lyase activity - - - 0.0000000000000000000000432 104.0
BYD3_k127_1974212_25 Cupin 2, conserved barrel domain protein - - - 0.0000000000000000000001454 106.0
BYD3_k127_1974212_26 Protein of unknown function (DUF1569) - - - 0.00000000000000000000149 100.0
BYD3_k127_1974212_27 SnoaL-like polyketide cyclase - - - 0.0000000000000000002638 94.0
BYD3_k127_1974212_28 Protein of unknown function (DUF2892) - - - 0.0000000000000003878 81.0
BYD3_k127_1974212_29 - - - - 0.000000000000001029 86.0
BYD3_k127_1974212_3 PFAM bifunctional deaminase-reductase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002209 287.0
BYD3_k127_1974212_30 - - - - 0.000000000007307 74.0
BYD3_k127_1974212_31 light absorption - - - 0.0000000002008 61.0
BYD3_k127_1974212_32 COGs COG3547 Transposase and inactivated derivatives - - - 0.0000000002014 71.0
BYD3_k127_1974212_33 - - - - 0.000001127 59.0
BYD3_k127_1974212_34 - - - - 0.00005188 48.0
BYD3_k127_1974212_4 Domain of unknown function (DUF4188) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000655 272.0
BYD3_k127_1974212_5 Protein of unknown function (DUF4256) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008564 278.0
BYD3_k127_1974212_6 glyoxalase III activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001039 265.0
BYD3_k127_1974212_7 PFAM NADP oxidoreductase coenzyme F420-dependent K06988 - 1.5.1.40 0.000000000000000000000000000000000000000000000000000000000000000000000000007817 257.0
BYD3_k127_1974212_8 Protein kinase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003265 265.0
BYD3_k127_1974212_9 3-demethylubiquinone-9 3-O-methyltransferase activity - - - 0.000000000000000000000000000000000000000000000000000000000000001131 231.0
BYD3_k127_1979418_0 Cytochrome C assembly protein K02195 - - 0.00000000000000000000000000000000000000000000000001606 187.0
BYD3_k127_1979418_1 - - - - 0.0000000000000000000000000000000000000000000000001267 191.0
BYD3_k127_1979418_2 TonB-linked outer membrane protein, SusC RagA family - - - 0.0006882 51.0
BYD3_k127_2025_0 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001713 539.0
BYD3_k127_2025_1 Epoxide hydrolase N terminus K01253,K21159 - 3.3.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002933 519.0
BYD3_k127_2025_2 peroxiredoxin activity K03386 GO:0003674,GO:0003824,GO:0004601,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0008150,GO:0008152,GO:0009605,GO:0009607,GO:0009636,GO:0009987,GO:0016209,GO:0016491,GO:0016684,GO:0020012,GO:0030682,GO:0042221,GO:0043207,GO:0044403,GO:0044413,GO:0044415,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051409,GO:0051701,GO:0051704,GO:0051707,GO:0051716,GO:0051805,GO:0051807,GO:0051832,GO:0051834,GO:0051920,GO:0052060,GO:0052173,GO:0052200,GO:0052376,GO:0052551,GO:0052564,GO:0052565,GO:0052572,GO:0055114,GO:0070887,GO:0075136,GO:0097237,GO:0098754,GO:0098869,GO:1990748 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002632 304.0
BYD3_k127_2025_3 AraC-like ligand binding domain - - - 0.00000000000000000000000000000000000000000000000182 178.0
BYD3_k127_2025_4 Epoxide hydrolase N terminus - - - 0.000000000000000000000000000000000000001569 156.0
BYD3_k127_2025_5 PFAM OsmC family protein - - - 0.00000002815 55.0
BYD3_k127_205857_0 Cyclic nucleotide-monophosphate binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002885 244.0
BYD3_k127_205857_1 SMART serine threonine protein kinase - - - 0.00000001132 58.0
BYD3_k127_2062011_0 Thiamine pyrophosphate enzyme, central domain - - - 1.839e-292 906.0
BYD3_k127_2062011_1 Binding-protein-dependent transport system inner membrane component K02011 - - 6.835e-269 838.0
BYD3_k127_2062011_10 Bacterial extracellular solute-binding protein K02012 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003212 388.0
BYD3_k127_2062011_11 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009734 378.0
BYD3_k127_2062011_12 Pirin K06911 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002055 334.0
BYD3_k127_2062011_13 Cupin domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002217 330.0
BYD3_k127_2062011_14 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001314 331.0
BYD3_k127_2062011_15 PFAM peptidase K01438 - 3.5.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001674 328.0
BYD3_k127_2062011_16 COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases K08319 - 1.1.1.411 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001768 314.0
BYD3_k127_2062011_17 Cupin domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004051 302.0
BYD3_k127_2062011_18 Cupin domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007922 298.0
BYD3_k127_2062011_19 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001603 284.0
BYD3_k127_2062011_2 - - - - 5.926e-203 635.0
BYD3_k127_2062011_20 Oxidoreductase molybdopterin binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004862 275.0
BYD3_k127_2062011_21 Belongs to the DapB family K00215 - 1.17.1.8 0.00000000000000000000000000000000000000000000000000000000000000004577 229.0
BYD3_k127_2062011_22 SelR domain K07305 - 1.8.4.12 0.0000000000000000000000000000000000000000000000000000000000000003474 222.0
BYD3_k127_2062011_23 PFAM von Willebrand factor type A K07114,K12511 - - 0.00000000000000000000000000000000000000000000000000000000005298 216.0
BYD3_k127_2062011_24 Bacterial extracellular solute-binding proteins, family 3 - - - 0.00000000000000000000000000000000000000000000000000001607 209.0
BYD3_k127_2062011_25 Alpha/beta hydrolase family K07020 - - 0.0000000000000000000000000000000000000000002547 166.0
BYD3_k127_2062011_26 cAMP biosynthetic process K18672 - 2.7.7.85 0.000000000000000000000000000000000000000007365 157.0
BYD3_k127_2062011_27 PFAM peptidase C60, sortase A and B K07284 - 3.4.22.70 0.000000000000000000000000000000000007348 144.0
BYD3_k127_2062011_29 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K06187,K09747 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464,GO:0097159,GO:1901363 - 0.000000000000000000000000001484 115.0
BYD3_k127_2062011_3 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006347 595.0
BYD3_k127_2062011_30 - - - - 0.0000000000000000000007315 99.0
BYD3_k127_2062011_31 PFAM heat shock protein DnaJ domain protein K05516 - - 0.000000000000002927 80.0
BYD3_k127_2062011_32 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000001719 77.0
BYD3_k127_2062011_34 PFAM FecR protein - - - 0.000000002124 68.0
BYD3_k127_2062011_35 GrpB protein - - - 0.000000109 57.0
BYD3_k127_2062011_36 cheY-homologous receiver domain - - - 0.000001454 55.0
BYD3_k127_2062011_37 Resolvase, N terminal domain - - - 0.00006038 51.0
BYD3_k127_2062011_4 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004073,GO:0006082,GO:0006520,GO:0006549,GO:0006553,GO:0006555,GO:0006566,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009081,GO:0009082,GO:0009085,GO:0009086,GO:0009088,GO:0009089,GO:0009097,GO:0009987,GO:0016053,GO:0016491,GO:0016620,GO:0016903,GO:0019752,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046451,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.2.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001462 563.0
BYD3_k127_2062011_5 ATP dependent DNA ligase C terminal region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006824 505.0
BYD3_k127_2062011_6 ATPases associated with a variety of cellular activities K02010 - 3.6.3.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000193 477.0
BYD3_k127_2062011_7 Bacterial extracellular solute-binding protein K02012 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001247 441.0
BYD3_k127_2062011_8 Bacterial extracellular solute-binding protein K02012 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002051 429.0
BYD3_k127_2062011_9 Belongs to the aspartokinase family K00928 - 2.7.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001031 423.0
BYD3_k127_2127897_0 Putative diguanylate phosphodiesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001207 332.0
BYD3_k127_2127897_1 DDE (Asp,Asp,Glu) domain - - - 0.0000005909 54.0
BYD3_k127_2275365_0 TonB-dependent receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002158 275.0
BYD3_k127_2275365_1 repeat protein - - - 0.0000000000004476 78.0
BYD3_k127_2279059_0 Protein kinase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002656 354.0
BYD3_k127_2279059_1 amine dehydrogenase activity - - - 0.0000000000000000001378 93.0
BYD3_k127_2283311_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00372 - - 0.0 1332.0
BYD3_k127_2283311_1 4Fe-4S dicluster domain K00184 - - 0.0 1122.0
BYD3_k127_2283311_10 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 - 1.9.3.1 3.087e-252 788.0
BYD3_k127_2283311_100 Transcription termination factor nusG - - - 0.00000000000000000000000000000006887 132.0
BYD3_k127_2283311_101 PFAM response regulator receiver - - - 0.0000000000000000000000000000001368 131.0
BYD3_k127_2283311_102 Belongs to the ompA family - - - 0.0000000000000000000000000000007301 130.0
BYD3_k127_2283311_103 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016469,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0032991,GO:0033178,GO:0034220,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0045259,GO:0045261,GO:0046034,GO:0046390,GO:0046483,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.00000000000000000000000000000115 125.0
BYD3_k127_2283311_104 Peptidylprolyl isomerase K03771 - 5.2.1.8 0.00000000000000000000000000001621 132.0
BYD3_k127_2283311_105 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.000000000000000000000000006653 117.0
BYD3_k127_2283311_107 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.000000000000000000001276 97.0
BYD3_k127_2283311_108 TIGRFAM Caa(3)-type oxidase, subunit IV K02277 - 1.9.3.1 0.000000000000000000003261 97.0
BYD3_k127_2283311_109 DoxX K16937 - 1.8.5.2 0.00000000000000000008954 95.0
BYD3_k127_2283311_11 Cys/Met metabolism PLP-dependent enzyme K01740 - 2.5.1.49 2.365e-250 776.0
BYD3_k127_2283311_110 R3H domain protein K06346 - - 0.0000000000000000004409 94.0
BYD3_k127_2283311_111 von Willebrand factor, type A - - - 0.000000000000000001543 97.0
BYD3_k127_2283311_112 Specifically methylates the N7 position of a guanine in 16S rRNA K03501 - 2.1.1.170 0.00000000000000001 93.0
BYD3_k127_2283311_114 Bacterial regulatory proteins, tetR family - - - 0.00000000000000006788 89.0
BYD3_k127_2283311_115 Regulatory protein, FmdB family - - - 0.000000000000000191 86.0
BYD3_k127_2283311_117 - - - - 0.000000000000002453 82.0
BYD3_k127_2283311_118 protein-disulfide reductase activity K01829,K04084 - 1.8.1.8,5.3.4.1 0.00000000000002052 79.0
BYD3_k127_2283311_119 Belongs to the bacterial ribosomal protein bL34 family K02914 - - 0.0000000000004266 70.0
BYD3_k127_2283311_12 Pyridoxal-dependent decarboxylase conserved domain - - - 1.982e-243 762.0
BYD3_k127_2283311_120 CHRD domain - - - 0.0000000000007392 75.0
BYD3_k127_2283311_121 PFAM blue (type 1) copper domain protein - - - 0.000000000001174 75.0
BYD3_k127_2283311_122 - - - - 0.00000000001564 65.0
BYD3_k127_2283311_123 Putative zinc-finger - - - 0.00000000002173 66.0
BYD3_k127_2283311_124 - - - - 0.00000000007262 69.0
BYD3_k127_2283311_125 - - - - 0.00000002081 63.0
BYD3_k127_2283311_126 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.0000000214 60.0
BYD3_k127_2283311_127 EamA-like transporter family - - - 0.000001335 53.0
BYD3_k127_2283311_13 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 9.81e-237 739.0
BYD3_k127_2283311_130 cellulose synthase operon C domain protein K20543 - - 0.00001571 57.0
BYD3_k127_2283311_131 Stress responsive A/B Barrel Domain - - - 0.00003763 52.0
BYD3_k127_2283311_132 5'-nucleotidase - - - 0.0008264 43.0
BYD3_k127_2283311_14 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 2.429e-236 744.0
BYD3_k127_2283311_15 PFAM Radical SAM - - - 8.803e-225 706.0
BYD3_k127_2283311_16 lysine biosynthetic process via aminoadipic acid - - - 3.545e-221 707.0
BYD3_k127_2283311_17 Polysulphide reductase, NrfD K00185 - - 1.113e-213 672.0
BYD3_k127_2283311_18 Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine K00641 - 2.3.1.31 3.646e-208 654.0
BYD3_k127_2283311_19 Pyridine nucleotide-disulphide oxidoreductase K07222 - - 3.856e-204 641.0
BYD3_k127_2283311_2 copper-translocating P-type ATPase K17686 - 3.6.3.54 0.0 1040.0
BYD3_k127_2283311_20 Sugar (and other) transporter - - - 1.016e-201 634.0
BYD3_k127_2283311_21 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 - - 1.043e-196 633.0
BYD3_k127_2283311_22 PFAM UvrD REP helicase K03657 - 3.6.4.12 3.697e-194 630.0
BYD3_k127_2283311_23 peptidase S9B dipeptidylpeptidase IV domain protein K01278 - 3.4.14.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000347 626.0
BYD3_k127_2283311_24 Protein tyrosine kinase K08282,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002397 620.0
BYD3_k127_2283311_25 Cyclic nucleotide-monophosphate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003641 607.0
BYD3_k127_2283311_26 TIGRFAM glutamine synthetase, type I K01915 - 6.3.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002121 578.0
BYD3_k127_2283311_27 Belongs to the amidase family K01426,K02433 - 3.5.1.4,6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001247 567.0
BYD3_k127_2283311_28 Sigma-70 region 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002822 529.0
BYD3_k127_2283311_29 4-alpha-glucanotransferase K00705 - 2.4.1.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001937 541.0
BYD3_k127_2283311_3 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 1.627e-316 989.0
BYD3_k127_2283311_30 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001896 498.0
BYD3_k127_2283311_31 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001449 497.0
BYD3_k127_2283311_32 PEP-utilising enzyme, mobile domain K01007 - 2.7.9.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001537 506.0
BYD3_k127_2283311_33 PFAM L-carnitine dehydratase bile acid-inducible protein F - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003462 490.0
BYD3_k127_2283311_34 Beta-Casp domain K07576 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002054 482.0
BYD3_k127_2283311_35 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00639 GO:0003674,GO:0003824,GO:0005488,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008710,GO:0008890,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009987,GO:0016053,GO:0016407,GO:0016408,GO:0016453,GO:0016740,GO:0016746,GO:0016747,GO:0017144,GO:0018130,GO:0019752,GO:0019842,GO:0030170,GO:0032787,GO:0034641,GO:0036094,GO:0042364,GO:0043167,GO:0043168,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0070279,GO:0071704,GO:0072330,GO:0097159,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.3.1.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004248 478.0
BYD3_k127_2283311_36 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K20974 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002269 492.0
BYD3_k127_2283311_37 Nucleotidyl transferase K04042,K11528 - 2.3.1.157,2.7.7.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001162 466.0
BYD3_k127_2283311_38 phosphorelay signal transduction system K01338 - 3.4.21.53 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005865 477.0
BYD3_k127_2283311_39 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds K01501 - 3.5.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006594 439.0
BYD3_k127_2283311_4 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 1.069e-298 940.0
BYD3_k127_2283311_40 ATPases associated with a variety of cellular activities K01990,K09689,K09691,K09693 - 3.6.3.38,3.6.3.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001158 437.0
BYD3_k127_2283311_41 Bacterial regulatory protein, Fis family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001947 443.0
BYD3_k127_2283311_42 Sigma factor PP2C-like phosphatases K07315 - 3.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001183 421.0
BYD3_k127_2283311_43 - K00262 - 1.4.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001066 397.0
BYD3_k127_2283311_44 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002859 377.0
BYD3_k127_2283311_45 PFAM aminotransferase, class I and II - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001666 379.0
BYD3_k127_2283311_46 PFAM Nucleotidyl transferase K00963 - 2.7.7.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005549 366.0
BYD3_k127_2283311_47 4 iron, 4 sulfur cluster binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001013 361.0
BYD3_k127_2283311_48 ABC-type Zn2 transport system, periplasmic component surface adhesin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006537 366.0
BYD3_k127_2283311_49 PFAM Aminotransferase class I and II - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004977 362.0
BYD3_k127_2283311_5 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 4.454e-287 921.0
BYD3_k127_2283311_50 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000198 358.0
BYD3_k127_2283311_51 ATP synthesis coupled electron transport K00336 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006783 359.0
BYD3_k127_2283311_52 Bacterial protein of unknown function (DUF885) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000159 356.0
BYD3_k127_2283311_53 RmuC family K09760 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001584 335.0
BYD3_k127_2283311_54 Protein of unknown function (DUF1800) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005586 333.0
BYD3_k127_2283311_55 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol K06131 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003743 323.0
BYD3_k127_2283311_56 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 - 3.2.2.23,4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003475 313.0
BYD3_k127_2283311_57 Cytochrome c7 and related cytochrome c - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008536 306.0
BYD3_k127_2283311_58 Cellulose biosynthesis protein BcsQ K03496 GO:0008150,GO:0022603,GO:0042173,GO:0042174,GO:0043937,GO:0043939,GO:0045595,GO:0045596,GO:0048519,GO:0048523,GO:0050789,GO:0050793,GO:0050794,GO:0051093,GO:0065007 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002283 304.0
BYD3_k127_2283311_59 Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000223 301.0
BYD3_k127_2283311_6 Pyridine nucleotide-disulphide oxidoreductase K00384 - 1.8.1.9 1.765e-286 890.0
BYD3_k127_2283311_60 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 GO:0002790,GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006457,GO:0006810,GO:0008104,GO:0008150,GO:0008565,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0022607,GO:0031224,GO:0031226,GO:0032940,GO:0032977,GO:0033036,GO:0034613,GO:0042886,GO:0043933,GO:0044085,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0046903,GO:0051179,GO:0051205,GO:0051234,GO:0051259,GO:0051260,GO:0051641,GO:0061024,GO:0065003,GO:0070727,GO:0071702,GO:0071705,GO:0071840,GO:0071944,GO:0072657,GO:0090150 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000684 312.0
BYD3_k127_2283311_61 histidine kinase A domain protein K02482 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007909 310.0
BYD3_k127_2283311_63 signal sequence binding K07152 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002553 287.0
BYD3_k127_2283311_64 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001474 286.0
BYD3_k127_2283311_65 Phosphate-selective porin O and P K07221 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003413 285.0
BYD3_k127_2283311_66 Methyltransferase type 11 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003622 279.0
BYD3_k127_2283311_67 protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002026 284.0
BYD3_k127_2283311_68 aminopeptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001586 296.0
BYD3_k127_2283311_69 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001722 279.0
BYD3_k127_2283311_7 glutamate-tRNA ligase activity K01886 GO:0003674,GO:0003824,GO:0004812,GO:0004819,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006425,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.18 1.721e-264 824.0
BYD3_k127_2283311_70 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003373 273.0
BYD3_k127_2283311_71 CoA binding domain K06929 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005365 272.0
BYD3_k127_2283311_72 OsmC-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007938 281.0
BYD3_k127_2283311_73 ABC-2 type transporter K09690 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001273 268.0
BYD3_k127_2283311_74 Cytochrome c biogenesis protein K06196 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005665 263.0
BYD3_k127_2283311_75 PFAM cytochrome c oxidase, subunit III K02276 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000001411 256.0
BYD3_k127_2283311_76 D-isomer specific 2-hydroxyacid dehydrogenase catalytic K00058 - 1.1.1.399,1.1.1.95 0.00000000000000000000000000000000000000000000000000000000000000000000002443 248.0
BYD3_k127_2283311_77 Belongs to the ParB family K03497 - - 0.000000000000000000000000000000000000000000000000000000000000000000001487 246.0
BYD3_k127_2283311_78 Protein of unknown function (DUF3341) - - - 0.000000000000000000000000000000000000000000000000000000000000000000002061 243.0
BYD3_k127_2283311_79 oxidoreductase activity, acting on diphenols and related substances as donors - - - 0.000000000000000000000000000000000000000000000000000000000000000000003395 244.0
BYD3_k127_2283311_8 nitrite transmembrane transporter activity - - - 2.229e-255 809.0
BYD3_k127_2283311_80 Predicted membrane protein (DUF2231) - - - 0.00000000000000000000000000000000000000000000000000000000000000000001051 244.0
BYD3_k127_2283311_81 PFAM Peptidase M23 - - - 0.00000000000000000000000000000000000000000000000000000000000000000009258 246.0
BYD3_k127_2283311_82 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.0000000000000000000000000000000000000000000000000000000000000000007801 238.0
BYD3_k127_2283311_83 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 GO:0000154,GO:0000451,GO:0000453,GO:0001510,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 2.1.1.198 0.00000000000000000000000000000000000000000000000000000000000000006402 233.0
BYD3_k127_2283311_84 histidine kinase A domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000001691 236.0
BYD3_k127_2283311_85 - - - - 0.00000000000000000000000000000000000000000000000000000002816 214.0
BYD3_k127_2283311_86 manganese ion transmembrane transporter activity - - - 0.000000000000000000000000000000000000000000000000000000185 219.0
BYD3_k127_2283311_87 COG2301 Citrate lyase beta subunit K01644 - 4.1.3.34 0.000000000000000000000000000000000000000000000000000002918 201.0
BYD3_k127_2283311_88 Sigma-70, region 4 K03088 - - 0.0000000000000000000000000000000000000000000000000002377 198.0
BYD3_k127_2283311_89 spore germination - - - 0.000000000000000000000000000000000000000000000000007476 190.0
BYD3_k127_2283311_9 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 1.47e-253 795.0
BYD3_k127_2283311_90 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose - - - 0.0000000000000000000000000000000000000000000000001494 183.0
BYD3_k127_2283311_91 SnoaL-like polyketide cyclase - - - 0.000000000000000000000000000000000000000000000000209 185.0
BYD3_k127_2283311_92 PFAM short chain dehydrogenase K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000244 176.0
BYD3_k127_2283311_93 YCII-related domain - - - 0.000000000000000000000000000000000000000003512 161.0
BYD3_k127_2283311_94 AI-2E family transporter K03548 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008150,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944 - 0.000000000000000000000000000000000000002985 160.0
BYD3_k127_2283311_95 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K02405 - - 0.0000000000000000000000000000000000003361 153.0
BYD3_k127_2283311_96 methyltransferase - - - 0.000000000000000000000000000000000001064 147.0
BYD3_k127_2283311_97 FabA-like domain K02372 - 4.2.1.59 0.000000000000000000000000000000000008032 141.0
BYD3_k127_2283311_98 negative regulation of transcription, DNA-templated - - - 0.00000000000000000000000000000000005323 137.0
BYD3_k127_2283311_99 Belongs to the glutaredoxin family. Monothiol subfamily K07390 - - 0.0000000000000000000000000000000005153 138.0
BYD3_k127_2303536_0 Asparagine synthase K01953 - 6.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006174 567.0
BYD3_k127_2303536_1 Heparinase II/III N-terminus - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001333 308.0
BYD3_k127_2303536_2 transferase activity, transferring glycosyl groups K01912 - 6.2.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000000005163 267.0
BYD3_k127_2303536_3 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012,K00066 - 1.1.1.132,1.1.1.22 0.000000000000000000000000000000001565 132.0
BYD3_k127_2303536_4 Pectate lyase K21606 - 3.2.1.202 0.000000000002526 79.0
BYD3_k127_2319159_0 COGs COG1629 Outer membrane receptor protein mostly Fe transport K02014 - - 0.0000000000000000000002028 112.0
BYD3_k127_2333707_0 3-demethylubiquinone-9 3-O-methyltransferase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001182 258.0
BYD3_k127_2333707_1 lactoylglutathione lyase activity - - - 0.000000000000000000000000000000000000008679 153.0
BYD3_k127_2335242_0 TonB dependent receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004397 475.0
BYD3_k127_2445121_0 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004482 499.0
BYD3_k127_2445121_1 Uncharacterised protein family (UPF0093) K08973 - - 0.0000000000000000000000000000000000004863 142.0
BYD3_k127_2491674_0 oligosaccharyl transferase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000348 320.0
BYD3_k127_2491674_1 Macrocin-O-methyltransferase (TylF) K05303 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003789 305.0
BYD3_k127_2491674_2 Glycosyltransferase like family 2 - - - 0.0000000000000000000000000000000000000000000000001007 198.0
BYD3_k127_2491674_3 glycosyl transferase group 1 - - - 0.00000000000000000000000000000000000000000003591 164.0
BYD3_k127_2491674_4 Methyltransferase domain - - - 0.00000000000000000000000000000000000001237 164.0
BYD3_k127_2491674_5 Methyltransferase domain K00568 - 2.1.1.222,2.1.1.64 0.0000000000000000004761 102.0
BYD3_k127_2491674_6 Glycosyl transferase, family 2 - - - 0.00000001575 68.0
BYD3_k127_2491674_7 - - - - 0.0000392 53.0
BYD3_k127_25059_0 Peptidase M56, BlaR1 - - - 0.000000000000000000000000000000000000000932 159.0
BYD3_k127_25059_1 Penicillinase repressor - - - 0.000000000000000000000000000000006594 131.0
BYD3_k127_2507241_0 AAA domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006589 513.0
BYD3_k127_2507241_1 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.00000000000000000000000000000000000000000000000000000001266 201.0
BYD3_k127_2554646_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 5.001e-309 964.0
BYD3_k127_2554646_1 radical SAM domain protein - - - 2.44e-205 650.0
BYD3_k127_2554646_10 Malate synthase K01638 - 2.3.3.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001256 424.0
BYD3_k127_2554646_11 Mycolic acid cyclopropane synthetase K00574 - 2.1.1.79 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001291 411.0
BYD3_k127_2554646_12 PFAM major facilitator superfamily MFS_1 K08177 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004466 361.0
BYD3_k127_2554646_13 PFAM MscS Mechanosensitive ion channel K16052 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002534 353.0
BYD3_k127_2554646_14 2-dehydropantoate 2-reductase K00077 - 1.1.1.169 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005651 347.0
BYD3_k127_2554646_15 response to heat K07090 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004062 334.0
BYD3_k127_2554646_16 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001655 341.0
BYD3_k127_2554646_17 geranylgeranyl reductase activity K14257 - 1.14.19.49 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001231 319.0
BYD3_k127_2554646_18 Beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001665 304.0
BYD3_k127_2554646_19 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000148 305.0
BYD3_k127_2554646_2 TonB-dependent Receptor Plug Domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007073 620.0
BYD3_k127_2554646_20 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000696 273.0
BYD3_k127_2554646_21 Protein of unknown function (DUF1722) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008447 282.0
BYD3_k127_2554646_22 Phosphoadenosine phosphosulfate reductase family K00390 - 1.8.4.10,1.8.4.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000007769 268.0
BYD3_k127_2554646_23 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001514 267.0
BYD3_k127_2554646_24 Cupin 2 conserved barrel domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000008959 246.0
BYD3_k127_2554646_25 Beta-lactamase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000000000000005087 233.0
BYD3_k127_2554646_26 2-Keto-4-pentenoate hydratase - - - 0.0000000000000000000000000000000000000000000000003654 198.0
BYD3_k127_2554646_27 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. - - - 0.00000000000000000000000000000000000000000000000989 176.0
BYD3_k127_2554646_28 amine dehydrogenase activity - - - 0.0000000000000000000000000000000000000004013 167.0
BYD3_k127_2554646_29 Peptidyl-prolyl cis-trans isomerase K01802,K03772,K03773 - 5.2.1.8 0.0000000000000000000000000000000002236 145.0
BYD3_k127_2554646_3 PFAM Aminotransferase class I and II K14267 - 2.6.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001655 544.0
BYD3_k127_2554646_30 COG0666 FOG Ankyrin repeat - - - 0.0000000000000000000000000000000005606 143.0
BYD3_k127_2554646_31 - - - - 0.000000000000000000000000000000001465 139.0
BYD3_k127_2554646_32 PKD domain containing protein - - - 0.00000000000000000000000000003414 134.0
BYD3_k127_2554646_33 - - - - 0.00000000000000000000000000003689 121.0
BYD3_k127_2554646_34 receptor K02014 - - 0.00000000000000000000000003571 110.0
BYD3_k127_2554646_35 SnoaL-like domain - - - 0.00000000000000000000000004619 113.0
BYD3_k127_2554646_36 - - - - 0.0000000000000000000000005261 115.0
BYD3_k127_2554646_37 IPT/TIG domain - - - 0.0000000000000000000000008176 120.0
BYD3_k127_2554646_38 transport - - - 0.000000000000000000003297 96.0
BYD3_k127_2554646_39 Acid phosphatase homologues - - - 0.0000000000000000001183 100.0
BYD3_k127_2554646_4 Acyl-CoA synthetase (AMP-forming) AMP-acid ligase II - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001174 530.0
BYD3_k127_2554646_40 - - - - 0.000000000000000001391 95.0
BYD3_k127_2554646_41 Domain of unknown function (DUF378) - - - 0.0000000000000004815 81.0
BYD3_k127_2554646_42 TonB dependent receptor K02014 - - 0.00000000001211 73.0
BYD3_k127_2554646_44 YceI-like domain - - - 0.00005163 52.0
BYD3_k127_2554646_45 Cytochrome C' - - - 0.00006128 52.0
BYD3_k127_2554646_47 PFAM blue (type 1) copper domain protein - - - 0.0009113 50.0
BYD3_k127_2554646_5 TonB-dependent Receptor Plug Domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001764 515.0
BYD3_k127_2554646_6 Phosphoadenosine phosphosulfate reductase family K00957 - 2.7.7.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000124 473.0
BYD3_k127_2554646_7 Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN NodQ subfamily K00956 - 2.7.7.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001766 466.0
BYD3_k127_2554646_8 Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls K01439 - 3.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006953 452.0
BYD3_k127_2554646_9 Belongs to the transferase hexapeptide repeat family K00674 - 2.3.1.117 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004987 420.0
BYD3_k127_2589077_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007056 520.0
BYD3_k127_2589077_1 Polyketide cyclase / dehydrase and lipid transport - - - 0.00000000000000000000000000000000000000002926 158.0
BYD3_k127_2628912_0 PFAM GGDEF domain containing protein - - - 0.000000000000000000000000001314 115.0
BYD3_k127_2638272_0 Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.0000000007718 63.0
BYD3_k127_2638272_1 Phosphoribosyl synthetase-associated domain K00948 - 2.7.6.1 0.00000257 50.0
BYD3_k127_2638272_2 solute binding protein K02035 - - 0.00002664 56.0
BYD3_k127_2638272_3 Bacterial capsule synthesis protein PGA_cap K07282 - - 0.00005007 50.0
BYD3_k127_2676352_0 Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol K06134 - - 0.0000000000000000000000000000000000000000000000000000000000000000000007528 243.0
BYD3_k127_2676352_1 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases K10914 - - 0.00000000000000000000000000000000000000000000000000000000002464 211.0
BYD3_k127_2676352_2 Ribosomal protein L13 K02871 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006417,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0015934,GO:0017148,GO:0019222,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032991,GO:0034248,GO:0034249,GO:0034641,GO:0034645,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046872,GO:0046914,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0070180,GO:0071704,GO:0080090,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904,GO:2000112,GO:2000113 - 0.000000000000000000000000000000000003927 138.0
BYD3_k127_2698395_0 Terminase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002976 374.0
BYD3_k127_2698395_1 Mrr N-terminal domain K07448 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000521 313.0
BYD3_k127_2698395_2 AAA domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004181 283.0
BYD3_k127_2698395_3 - K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000001322 214.0
BYD3_k127_2698395_6 Belongs to the 'phage' integrase family - - - 0.0000000000000000000006384 109.0
BYD3_k127_2698395_7 crossover junction endodeoxyribonuclease activity K03552 - 3.1.22.4 0.00000001312 62.0
BYD3_k127_2698395_8 Tetratricopeptide repeat - - - 0.000002598 58.0
BYD3_k127_2772887_0 PFAM Alcohol dehydrogenase zinc-binding domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001665 395.0
BYD3_k127_2772887_2 HTH domain - - - 0.00000000000000000000000000000008318 126.0
BYD3_k127_2775204_0 Belongs to the glycosyl hydrolase 13 family K01214 - 3.2.1.68 0.0 1057.0
BYD3_k127_2775204_1 Domain of unknown function (DUF3459) - - - 4.462e-209 659.0
BYD3_k127_2947976_0 response regulator K07714 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000115 398.0
BYD3_k127_2947976_1 GAF domain - - - 0.000000000000000000000006182 105.0
BYD3_k127_2947976_2 Involved in the tonB-independent uptake of proteins - - - 0.0000004972 63.0
BYD3_k127_2948615_0 transmembrane transporter activity K18138 - - 0.0 1620.0
BYD3_k127_2948615_1 PFAM Mo-dependent nitrogenase K00232 - 1.3.3.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009362 500.0
BYD3_k127_2948615_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001629 480.0
BYD3_k127_2948615_3 Evidence 4 Homologs of previously reported genes of K03975 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001052 328.0
BYD3_k127_2966254_0 ATPase activity K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000861 390.0
BYD3_k127_2966254_1 Na( ) H( ) antiporter that extrudes sodium in exchange for external protons K03313 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001529 312.0
BYD3_k127_2966254_2 Amino acid permease - - - 0.000000000000000000000000000000000000000001098 164.0
BYD3_k127_2980822_0 Sulfatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005392 593.0
BYD3_k127_2980822_1 gluconolactonase activity K01053 - 3.1.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000129 415.0
BYD3_k127_2980822_10 - - - - 0.000008044 52.0
BYD3_k127_2980822_11 - - - - 0.0004295 47.0
BYD3_k127_2980822_2 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides - - - 0.000000000000000000000000000000000000000000000000000000000000000000000716 241.0
BYD3_k127_2980822_3 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000906 177.0
BYD3_k127_2980822_4 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000002901 165.0
BYD3_k127_2980822_5 - - - - 0.000000000000000000000000000000000000001703 162.0
BYD3_k127_2980822_6 GrpB protein - - - 0.000000000000000000000000000000000001225 146.0
BYD3_k127_2980822_7 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0043021,GO:0043022,GO:0044424,GO:0044444,GO:0044464,GO:0044877 - 0.000000000000000000000000000007043 119.0
BYD3_k127_2980822_8 Polyketide cyclase / dehydrase and lipid transport - - - 0.0000000000000000000000000002057 120.0
BYD3_k127_2980822_9 COG1670 acetyltransferases, including N-acetylases of ribosomal proteins - - - 0.0000008019 51.0
BYD3_k127_2999502_0 Molydopterin dinucleotide binding domain K00123,K05299 - 1.17.1.10,1.17.1.9 0.0 1087.0
BYD3_k127_2999502_1 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007 - 2.7.9.2 8.353e-314 985.0
BYD3_k127_2999502_10 Putative serine esterase (DUF676) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002874 587.0
BYD3_k127_2999502_11 NADH:flavin oxidoreductase / NADH oxidase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004188 573.0
BYD3_k127_2999502_12 Sugar (and other) transporter K08369 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003786 537.0
BYD3_k127_2999502_13 Aminotransferase class-III K00823 - 2.6.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006597 539.0
BYD3_k127_2999502_14 Cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003811 527.0
BYD3_k127_2999502_15 Xanthine dehydrogenase K03520 - 1.2.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004227 531.0
BYD3_k127_2999502_16 AAA domain K07028 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002164 497.0
BYD3_k127_2999502_17 Erythromycin esterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003643 487.0
BYD3_k127_2999502_18 Cytochrome c - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007796 494.0
BYD3_k127_2999502_19 Pyruvate 2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component eukaryotic type beta subunit K00162 - 1.2.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007221 474.0
BYD3_k127_2999502_2 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01539 - 3.6.3.9 2.262e-299 950.0
BYD3_k127_2999502_20 Galactose-1-phosphate uridyl transferase, N-terminal domain K00965 - 2.7.7.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000769 449.0
BYD3_k127_2999502_21 Tripartite tricarboxylate transporter TctA family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001114 461.0
BYD3_k127_2999502_22 Domain of unknown function (DUF4071) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002083 441.0
BYD3_k127_2999502_23 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00161 - 1.2.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001681 430.0
BYD3_k127_2999502_24 Patatin-like phospholipase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004018 407.0
BYD3_k127_2999502_25 CotH kinase protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000139 405.0
BYD3_k127_2999502_26 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00627 - 2.3.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001802 383.0
BYD3_k127_2999502_27 Efflux ABC transporter permease protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001722 367.0
BYD3_k127_2999502_28 Efflux ABC transporter permease protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006835 362.0
BYD3_k127_2999502_29 Uncharacterized alpha/beta hydrolase domain (DUF2235) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000163 359.0
BYD3_k127_2999502_3 AMP-binding enzyme C-terminal domain K01895 - 6.2.1.1 6.797e-246 771.0
BYD3_k127_2999502_30 PFAM sodium calcium exchanger membrane region K07301 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002115 340.0
BYD3_k127_2999502_31 CHAT domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002056 357.0
BYD3_k127_2999502_32 Peptidoglycan-binding domain 1 protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005017 329.0
BYD3_k127_2999502_33 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007571 317.0
BYD3_k127_2999502_34 ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001701 300.0
BYD3_k127_2999502_35 Amidohydrolase K22213 - 4.1.1.52 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004084 303.0
BYD3_k127_2999502_36 Serine aminopeptidase, S33 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004852 295.0
BYD3_k127_2999502_37 Beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001674 294.0
BYD3_k127_2999502_38 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000309 302.0
BYD3_k127_2999502_39 Phosphoribosyl synthetase-associated domain K00948 - 2.7.6.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001116 287.0
BYD3_k127_2999502_4 WD40-like Beta Propeller Repeat - - - 4.007e-226 738.0
BYD3_k127_2999502_40 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM K03519 - 1.2.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000973 275.0
BYD3_k127_2999502_41 ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005665 273.0
BYD3_k127_2999502_42 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.0000000000000000000000000000000000000000000000000000000000000000000000003979 257.0
BYD3_k127_2999502_43 COG1218 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase K01082 - 3.1.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000002974 256.0
BYD3_k127_2999502_44 dienelactone hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005531 246.0
BYD3_k127_2999502_45 Caspase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000006906 247.0
BYD3_k127_2999502_46 Phosphoribosyl transferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000004771 237.0
BYD3_k127_2999502_47 Planctomycete cytochrome C - - - 0.0000000000000000000000000000000000000000000000000000000000000001436 229.0
BYD3_k127_2999502_48 Cupin domain - - - 0.0000000000000000000000000000000000000000000000000000000000533 207.0
BYD3_k127_2999502_49 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000006877 214.0
BYD3_k127_2999502_5 Animal haem peroxidase - - - 2.274e-220 699.0
BYD3_k127_2999502_50 Catalase - - - 0.000000000000000000000000000000000000000000000000000000004311 211.0
BYD3_k127_2999502_51 Domain of Unknown Function (DUF1080) - - - 0.0000000000000000000000000000000000000000000000000000000473 201.0
BYD3_k127_2999502_52 2Fe-2S -binding domain protein K03518 - 1.2.5.3 0.000000000000000000000000000000000000000000000000000002545 205.0
BYD3_k127_2999502_53 Glyoxalase-like domain K08234 - - 0.0000000000000000000000000000000000000000000000000001571 194.0
BYD3_k127_2999502_54 bacterial OsmY and nodulation domain - - - 0.000000000000000000000000000000000000000000000000000335 194.0
BYD3_k127_2999502_55 Short repeat of unknown function (DUF308) - - - 0.00000000000000000000000000000000000000000000000002241 190.0
BYD3_k127_2999502_56 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000000000000000000000000000000000001752 176.0
BYD3_k127_2999502_57 COG0589 Universal stress protein UspA and related K14055 - - 0.00000000000000000000000000000000000000000000002803 181.0
BYD3_k127_2999502_58 PFAM Cold-shock protein, DNA-binding - - - 0.00000000000000000000000000000000000000000000005562 176.0
BYD3_k127_2999502_59 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.00000000000000000000000000000000000000000000692 177.0
BYD3_k127_2999502_6 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain K01576,K01652 - 2.2.1.6,4.1.1.7 9.06e-214 684.0
BYD3_k127_2999502_60 Domain of unknown function (DUF4956) - - - 0.0000000000000000000000000000000000000003244 156.0
BYD3_k127_2999502_61 PFAM Formylglycine-generating sulfatase enzyme - - - 0.000000000000000000000000000000000000000913 165.0
BYD3_k127_2999502_62 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000001046 152.0
BYD3_k127_2999502_63 - - - - 0.0000000000000000000000000000000000004065 150.0
BYD3_k127_2999502_64 Cupin domain - - - 0.0000000000000000000000000000000000006682 142.0
BYD3_k127_2999502_65 Domain of unknown function DUF302 - - - 0.00000000000000000000000000000000004936 143.0
BYD3_k127_2999502_66 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000000000000000000000000001399 141.0
BYD3_k127_2999502_67 VTC domain - - - 0.0000000000000000000000000000000008592 143.0
BYD3_k127_2999502_68 COG0589 Universal stress protein UspA and related nucleotide-binding proteins - - - 0.0000000000000000000000000000004065 134.0
BYD3_k127_2999502_69 Tetratricopeptide repeat - - - 0.0000000000000000000000000004885 122.0
BYD3_k127_2999502_7 Belongs to the UbiD family - - - 6.28e-201 637.0
BYD3_k127_2999502_70 Belongs to the UPF0102 family K07460 - - 0.00000000000000000000000001179 115.0
BYD3_k127_2999502_71 Universal stress protein - - - 0.0000000000000000000000001682 114.0
BYD3_k127_2999502_72 Domain in cystathionine beta-synthase and other proteins. - - - 0.000000000000000000000003604 110.0
BYD3_k127_2999502_73 PFAM carbon monoxide dehydrogenase subunit G K09386 - - 0.00000000000000000000008167 103.0
BYD3_k127_2999502_74 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 - 6.1.1.16 0.000000000000000000003713 98.0
BYD3_k127_2999502_75 serine threonine protein kinase K03587,K08884,K12132 - 2.7.11.1,3.4.16.4 0.00000000000000000003384 104.0
BYD3_k127_2999502_76 Phosphopantetheine attachment site - - - 0.00000000000000005183 87.0
BYD3_k127_2999502_77 PFAM Mo-dependent nitrogenase - - - 0.0000000000000001879 85.0
BYD3_k127_2999502_78 - - - - 0.000000000000001621 81.0
BYD3_k127_2999502_79 Tellurite resistance protein TerB - - - 0.000000000000004306 85.0
BYD3_k127_2999502_8 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000136 643.0
BYD3_k127_2999502_81 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.0000000000006379 78.0
BYD3_k127_2999502_82 - - - - 0.00000000002526 72.0
BYD3_k127_2999502_83 - - - - 0.0000000001044 72.0
BYD3_k127_2999502_84 COG1680 Beta-lactamase class C and other penicillin binding proteins - - - 0.000000001658 67.0
BYD3_k127_2999502_85 Psort location OuterMembrane, score - - - 0.0000002837 63.0
BYD3_k127_2999502_86 CHRD domain - - - 0.000001394 57.0
BYD3_k127_2999502_88 - - - - 0.0003357 53.0
BYD3_k127_2999502_9 FAD binding domain K14974 - 1.14.13.114 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004816 597.0
BYD3_k127_3021510_0 peptidase S8 and S53, subtilisin, kexin, sedolisin - - - 0.0000317 56.0
BYD3_k127_3024246_0 glucose sorbosone - - - 0.0000000000000000000000000000000000008198 147.0
BYD3_k127_3097539_0 - - - - 0.0005414 52.0
BYD3_k127_3134215_0 Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity K03782 GO:0000302,GO:0003674,GO:0003824,GO:0004096,GO:0004601,GO:0005488,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009056,GO:0009636,GO:0009987,GO:0010035,GO:0016209,GO:0016491,GO:0016684,GO:0016999,GO:0017001,GO:0017144,GO:0020037,GO:0033554,GO:0034599,GO:0034614,GO:0035690,GO:0042221,GO:0042493,GO:0042542,GO:0042737,GO:0042743,GO:0042744,GO:0044237,GO:0044248,GO:0044424,GO:0044444,GO:0044464,GO:0046677,GO:0046906,GO:0048037,GO:0050896,GO:0051186,GO:0051187,GO:0051716,GO:0055114,GO:0070301,GO:0070887,GO:0071236,GO:0072593,GO:0097159,GO:0097237,GO:0098754,GO:0098869,GO:1901363,GO:1901700,GO:1901701,GO:1990748 1.11.1.21 8.713e-290 897.0
BYD3_k127_3134215_1 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 8.178e-262 816.0
BYD3_k127_3134215_10 response regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000172 496.0
BYD3_k127_3134215_11 ATP-binding region ATPase domain protein K02487,K03407,K06596 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001418 492.0
BYD3_k127_3134215_12 MmgE/PrpD family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009752 447.0
BYD3_k127_3134215_13 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001337 440.0
BYD3_k127_3134215_14 Flavin-binding monooxygenase-like K07222 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001163 440.0
BYD3_k127_3134215_15 PFAM sodium hydrogen exchanger - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003851 438.0
BYD3_k127_3134215_16 metal ion transmembrane transporter activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000161 411.0
BYD3_k127_3134215_17 SMART Integrin alpha beta-propellor repeat protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002977 424.0
BYD3_k127_3134215_18 COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001613 409.0
BYD3_k127_3134215_19 Domain of unknown function (DUF3943) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007586 379.0
BYD3_k127_3134215_2 Belongs to the UPF0753 family K09822 - - 3.552e-234 758.0
BYD3_k127_3134215_20 Response regulator receiver K13924 - 2.1.1.80,3.1.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000198 382.0
BYD3_k127_3134215_21 Protein kinase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000299 353.0
BYD3_k127_3134215_22 NADH ubiquinone oxidoreductase subunit 5 (chain L) K05577 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002092 344.0
BYD3_k127_3134215_23 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003027 308.0
BYD3_k127_3134215_24 PFAM bifunctional deaminase-reductase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000714 287.0
BYD3_k127_3134215_25 Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity K03782 - 1.11.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005182 286.0
BYD3_k127_3134215_26 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000009212 291.0
BYD3_k127_3134215_27 Amidohydrolase K22213 - 4.1.1.52 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006084 283.0
BYD3_k127_3134215_28 3-demethylubiquinone-9 3-O-methyltransferase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000625 273.0
BYD3_k127_3134215_29 Methyltransferase, chemotaxis proteins K00575,K13486 - 2.1.1.80 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007923 274.0
BYD3_k127_3134215_3 Carboxypeptidase regulatory-like domain - - - 3.313e-214 704.0
BYD3_k127_3134215_30 Serine aminopeptidase, S33 K06889 GO:0005575,GO:0005618,GO:0005623,GO:0008150,GO:0009605,GO:0009607,GO:0030312,GO:0035821,GO:0043207,GO:0044003,GO:0044403,GO:0044419,GO:0044464,GO:0050896,GO:0051701,GO:0051704,GO:0051707,GO:0051817,GO:0052031,GO:0052173,GO:0052200,GO:0052255,GO:0052552,GO:0052553,GO:0052561,GO:0052562,GO:0052564,GO:0052572,GO:0071944,GO:0075136 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002678 270.0
BYD3_k127_3134215_31 Cyclic nucleotide-monophosphate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001523 254.0
BYD3_k127_3134215_32 membrane K07148 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002749 253.0
BYD3_k127_3134215_33 NADH ubiquinone oxidoreductase subunit 4 (Chain M) K00342 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000008525 249.0
BYD3_k127_3134215_34 Domain of unknown function (DU1801) - - - 0.000000000000000000000000000000000000000000000000000000000000000001933 233.0
BYD3_k127_3134215_35 ECF sigma factor - - - 0.000000000000000000000000000000000000000000000000000000000000000752 224.0
BYD3_k127_3134215_36 amine dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000001068 214.0
BYD3_k127_3134215_37 Ferric uptake regulator family K22297 - - 0.00000000000000000000000000000000000000000000000000000002593 201.0
BYD3_k127_3134215_38 Domain of unknown function (DU1801) - - - 0.00000000000000000000000000000000000000000000000000006072 192.0
BYD3_k127_3134215_39 CheC inhibitor of MCP methylation K03410 - - 0.000000000000000000000000000000000000000000000000002776 192.0
BYD3_k127_3134215_4 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 6.79e-205 674.0
BYD3_k127_3134215_40 Transcriptional regulator, Crp Fnr family - - - 0.0000000000000000000000000000000000000000000000000747 183.0
BYD3_k127_3134215_41 Inorganic pyrophosphatase K01507 - 3.6.1.1 0.000000000000000000000000000000000000000000000001533 179.0
BYD3_k127_3134215_42 WD40 repeats - - - 0.0000000000000000000000000000000000000000000000278 183.0
BYD3_k127_3134215_43 Domain of unknown function (DUF4159) - - - 0.0000000000000000000000000000000000000000000002312 179.0
BYD3_k127_3134215_44 Two component signalling adaptor domain K03408 - - 0.000000000000000000000000000000000000000001521 165.0
BYD3_k127_3134215_45 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.000000000000000000000000000000000000009559 165.0
BYD3_k127_3134215_46 ethanolamine kinase activity K07251 - 2.7.1.89 0.00000000000000000000000000000000000001249 160.0
BYD3_k127_3134215_47 cheY-homologous receiver domain K03413 - - 0.000000000000000000000000000000000002507 144.0
BYD3_k127_3134215_48 iron assimilation - - - 0.000000000000000000000000000000000042 136.0
BYD3_k127_3134215_49 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 GO:0003674,GO:0005488,GO:0005515,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008150,GO:0009987,GO:0010033,GO:0035966,GO:0042221,GO:0043167,GO:0043169,GO:0046872,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0061077 - 0.0000000000000000000000000000000001873 142.0
BYD3_k127_3134215_5 Protein tyrosine kinase K12132 - 2.7.11.1 1.943e-196 647.0
BYD3_k127_3134215_50 Response regulator receiver domain K03413 - - 0.0000000000000000000000000000000003704 134.0
BYD3_k127_3134215_51 Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP) K01823 - 5.3.3.2 0.0000000000000000000000000000002388 129.0
BYD3_k127_3134215_52 Amidohydrolase family - - - 0.0000000000000000000000000000004187 141.0
BYD3_k127_3134215_53 - - - - 0.000000000000000000000000000008574 128.0
BYD3_k127_3134215_54 GYD domain - - - 0.00000000000000000000000000001075 123.0
BYD3_k127_3134215_55 - - - - 0.00000000000000000000000000004981 127.0
BYD3_k127_3134215_56 DIE2/ALG10 family - - - 0.0000000000000000000000000003319 131.0
BYD3_k127_3134215_57 Transcriptional regulatory protein, C terminal - - - 0.0000000000000000000000000004959 128.0
BYD3_k127_3134215_58 - - - - 0.0000000000000000000000000009851 124.0
BYD3_k127_3134215_59 Involved in the tonB-independent uptake of proteins K12132 - 2.7.11.1 0.00000000000000000000000003716 121.0
BYD3_k127_3134215_6 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001138 583.0
BYD3_k127_3134215_60 Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair - - - 0.0000000000000000000000005474 110.0
BYD3_k127_3134215_61 ArsR family transcriptional regulator - - - 0.0000000000000000000000006948 110.0
BYD3_k127_3134215_62 - - - - 0.000000000000000000000000921 111.0
BYD3_k127_3134215_63 - - - - 0.00000000000000000006071 94.0
BYD3_k127_3134215_64 Cupin 2, conserved barrel domain protein - - - 0.0000000000000005839 82.0
BYD3_k127_3134215_65 - - - - 0.000000000000002716 88.0
BYD3_k127_3134215_67 - - - - 0.00000000000003738 85.0
BYD3_k127_3134215_68 - - - - 0.0000000000424 73.0
BYD3_k127_3134215_69 - - - - 0.00000000005278 72.0
BYD3_k127_3134215_7 lysine biosynthetic process via aminoadipic acid - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009393 523.0
BYD3_k127_3134215_71 PFAM CHAD domain containing protein - - - 0.000000002609 68.0
BYD3_k127_3134215_72 - - - - 0.00000001085 64.0
BYD3_k127_3134215_73 Beta-lactamase - - - 0.0000001472 59.0
BYD3_k127_3134215_74 Belongs to the N(4) N(6)-methyltransferase family - - - 0.000002986 50.0
BYD3_k127_3134215_75 Cupin 2, conserved barrel domain protein - - - 0.00001929 46.0
BYD3_k127_3134215_76 - - - - 0.00003591 56.0
BYD3_k127_3134215_78 - - - - 0.00008006 51.0
BYD3_k127_3134215_8 Protein of unknown function (DUF1624) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001015 497.0
BYD3_k127_3134215_9 PBS lyase HEAT-like repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002822 518.0
BYD3_k127_3189615_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 1.368e-291 915.0
BYD3_k127_3189615_1 Domain of unknown function (DUF1998) K06877 GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006807,GO:0008026,GO:0008150,GO:0008152,GO:0008186,GO:0009987,GO:0010501,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070035,GO:0071704,GO:0090304,GO:0140098,GO:1901360 - 3.716e-281 885.0
BYD3_k127_3189615_10 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 GO:0000166,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005524,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0030163,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0044238,GO:0051301,GO:0070011,GO:0071704,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009459 552.0
BYD3_k127_3189615_101 - - - - 0.000499 50.0
BYD3_k127_3189615_11 Asparagine synthase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001701 559.0
BYD3_k127_3189615_12 Ribonuclease E/G family K08300,K08301 - 3.1.26.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003314 515.0
BYD3_k127_3189615_13 Rhodanese-like domain K01069 - 3.1.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000173 482.0
BYD3_k127_3189615_14 PFAM Alanine dehydrogenase PNT K00324 - 1.6.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003336 481.0
BYD3_k127_3189615_15 GHMP kinases N terminal domain K07031 - 2.7.1.168 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001642 484.0
BYD3_k127_3189615_16 Carboxypeptidase regulatory-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009492 505.0
BYD3_k127_3189615_17 Belongs to the DegT DnrJ EryC1 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005958 474.0
BYD3_k127_3189615_18 CobQ CobB MinD ParA nucleotide binding domain K08252,K13661,K16554,K16692 - 2.7.10.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006557 470.0
BYD3_k127_3189615_19 Amino acid permease K03294 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008123 449.0
BYD3_k127_3189615_2 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 5.785e-224 701.0
BYD3_k127_3189615_20 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 - 5.3.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004304 435.0
BYD3_k127_3189615_21 pyrimidine-nucleoside phosphorylase K00756,K00758 - 2.4.2.2,2.4.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001212 436.0
BYD3_k127_3189615_22 Penicillin-binding protein, dimerisation domain K05515 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001247 443.0
BYD3_k127_3189615_23 Na dependent nucleoside K03317 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001075 421.0
BYD3_k127_3189615_24 PFAM NAD dependent epimerase dehydratase family K12454 - 5.1.3.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000399 403.0
BYD3_k127_3189615_25 PFAM peptidase S49 K04773 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000306 398.0
BYD3_k127_3189615_26 Polysaccharide biosynthesis protein K01784 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002749 383.0
BYD3_k127_3189615_27 Transcriptional regulatory protein, C terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006387 347.0
BYD3_k127_3189615_28 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006791 342.0
BYD3_k127_3189615_29 ATPase family associated with various cellular activities (AAA) K03924 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001097 328.0
BYD3_k127_3189615_3 Belongs to the aldehyde dehydrogenase family K00128,K22187 - 1.2.1.3 8.974e-219 689.0
BYD3_k127_3189615_30 COGs COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07665 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006789 324.0
BYD3_k127_3189615_31 Putative neutral zinc metallopeptidase K07054 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009037 327.0
BYD3_k127_3189615_32 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001645 313.0
BYD3_k127_3189615_33 Aerotolerance regulator N-terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006986 327.0
BYD3_k127_3189615_34 The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate K03783 - 2.4.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000143 313.0
BYD3_k127_3189615_35 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 GO:0000408,GO:0002949,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070525,GO:0071704,GO:0090304,GO:1901360 2.3.1.234 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006649 312.0
BYD3_k127_3189615_36 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000132 300.0
BYD3_k127_3189615_37 ABC transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001153 310.0
BYD3_k127_3189615_38 Calcineurin-like phosphoesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009575 300.0
BYD3_k127_3189615_39 Cell cycle protein K05837 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001235 298.0
BYD3_k127_3189615_4 Cystathionine beta-synthase K01697 - 4.2.1.22 2.89e-198 632.0
BYD3_k127_3189615_40 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001526 310.0
BYD3_k127_3189615_41 peptidyl-prolyl isomerase K03770 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003005 307.0
BYD3_k127_3189615_42 Protein of unknown function DUF58 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002176 291.0
BYD3_k127_3189615_43 PFAM Glycosyl transferase, group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005221 282.0
BYD3_k127_3189615_44 - K06862 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000006023 257.0
BYD3_k127_3189615_45 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000007042 265.0
BYD3_k127_3189615_46 SIS domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004113 252.0
BYD3_k127_3189615_47 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002995 243.0
BYD3_k127_3189615_48 Domain of unknown function (DUF4159) - - - 0.000000000000000000000000000000000000000000000000000000000000000000002205 243.0
BYD3_k127_3189615_49 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000002029 243.0
BYD3_k127_3189615_5 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001188 605.0
BYD3_k127_3189615_50 Bacterial sugar transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000005714 248.0
BYD3_k127_3189615_51 Domain of unknown function (DUF4159) - - - 0.00000000000000000000000000000000000000000000000000000000000000004352 230.0
BYD3_k127_3189615_52 Polyketide cyclase / dehydrase and lipid transport - - - 0.00000000000000000000000000000000000000000000000000000000000000008937 230.0
BYD3_k127_3189615_53 Belongs to the peptidase S8 family K14645 - - 0.0000000000000000000000000000000000000000000000000000000000000002084 240.0
BYD3_k127_3189615_54 PFAM Glycosyl transferase, group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000002159 237.0
BYD3_k127_3189615_55 glycosyl transferase group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000006653 231.0
BYD3_k127_3189615_56 Uncharacterised protein family UPF0047 - - - 0.000000000000000000000000000000000000000000000000000000000001205 211.0
BYD3_k127_3189615_57 PFAM Metal-dependent phosphohydrolase, HD - - - 0.00000000000000000000000000000000000000000000000000000000004057 223.0
BYD3_k127_3189615_58 Site-specific DNA-methyltransferase (Adenine-specific) K06223 - 2.1.1.72 0.00000000000000000000000000000000000000000000000000000000004713 219.0
BYD3_k127_3189615_59 glycosyl transferase group 1 K03208 - - 0.0000000000000000000000000000000000000000000000000000000005849 218.0
BYD3_k127_3189615_6 D,D-heptose 1,7-bisphosphate phosphatase K03273 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008270,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0034200,GO:0042578,GO:0043167,GO:0043169,GO:0044237,GO:0046872,GO:0046914 3.1.3.82,3.1.3.83 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001585 614.0
BYD3_k127_3189615_60 FKBP-type peptidyl-prolyl cis-trans isomerase K01802,K03772 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000002912 192.0
BYD3_k127_3189615_61 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000004435 199.0
BYD3_k127_3189615_62 Exonuclease K07502 - - 0.000000000000000000000000000000000000000000000000003349 200.0
BYD3_k127_3189615_63 Domain of unknown function (DUF4159) - - - 0.000000000000000000000000000000000000000000000000005094 192.0
BYD3_k127_3189615_64 diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000007411 194.0
BYD3_k127_3189615_65 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000009496 192.0
BYD3_k127_3189615_66 Pfam 2OG-Fe(II) oxygenase - - - 0.00000000000000000000000000000000000000000000000009333 187.0
BYD3_k127_3189615_67 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000006847 186.0
BYD3_k127_3189615_68 glyoxalase bleomycin resistance protein dioxygenase - - - 0.000000000000000000000000000000000000000000004814 168.0
BYD3_k127_3189615_69 Polysaccharide export protein K01991,K20988 - - 0.0000000000000000000000000000000000000000005832 168.0
BYD3_k127_3189615_7 PFAM Alcohol dehydrogenase GroES-like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009468 595.0
BYD3_k127_3189615_70 Necessary for normal cell division and for the maintenance of normal septation K03978 - - 0.00000000000000000000000000000000000005352 149.0
BYD3_k127_3189615_71 This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis K01489 - 3.5.4.5 0.0000000000000000000000000000000000003242 149.0
BYD3_k127_3189615_72 methyltransferase activity - - - 0.0000000000000000000000000000000000004368 160.0
BYD3_k127_3189615_73 NUDIX domain - - - 0.00000000000000000000000000000000001193 144.0
BYD3_k127_3189615_74 4TM region of pyridine nucleotide transhydrogenase, mitoch K00322,K00324 - 1.6.1.1,1.6.1.2 0.0000000000000000000000000000000001912 136.0
BYD3_k127_3189615_75 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000009195 142.0
BYD3_k127_3189615_76 Involved in formation and maintenance of cell shape K03570 - - 0.0000000000000000000000000000001511 134.0
BYD3_k127_3189615_77 methyltransferase - - - 0.000000000000000000000000000001022 134.0
BYD3_k127_3189615_78 Binds the 23S rRNA K02909 - - 0.00000000000000000000000000004443 119.0
BYD3_k127_3189615_79 O-Antigen ligase K02847 - - 0.00000000000000000000001602 115.0
BYD3_k127_3189615_8 nuclear chromosome segregation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000257 590.0
BYD3_k127_3189615_80 - - - - 0.0000000000000000000002215 104.0
BYD3_k127_3189615_81 polysaccharide biosynthetic process - - - 0.00000000000000000001314 106.0
BYD3_k127_3189615_82 PFAM AIG2 family protein K20757 - 4.3.1.27 0.0000000000000000004516 91.0
BYD3_k127_3189615_83 - K01992,K19341 - - 0.0000000000000000005681 98.0
BYD3_k127_3189615_84 Glycosyl transferase - - - 0.00000000000000001292 94.0
BYD3_k127_3189615_85 methyltransferase - - - 0.00000000000000002714 94.0
BYD3_k127_3189615_86 transcriptional regulator containing an HTH domain fused to a Zn-ribbon K07743 - - 0.00000000000000004746 84.0
BYD3_k127_3189615_87 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated K00567 - 2.1.1.63 0.0000000000000006585 82.0
BYD3_k127_3189615_88 - - - - 0.000000000000001609 85.0
BYD3_k127_3189615_89 DNA repair - - - 0.00000000000001313 87.0
BYD3_k127_3189615_9 TIGRFAM Cell shape determining protein MreB Mrl K03569 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009386 551.0
BYD3_k127_3189615_91 tRNA (guanine(37)-N(1))-methyltransferase activity - - - 0.0000000000005111 80.0
BYD3_k127_3189615_92 ABC-2 family transporter protein K01992 - - 0.000000000003113 76.0
BYD3_k127_3189615_93 O-antigen ligase like membrane protein - - - 0.00000000003506 76.0
BYD3_k127_3189615_94 SMART Transport-associated and nodulation - - - 0.000000001699 68.0
BYD3_k127_3189615_95 shape-determining protein MreD K03571 - - 0.00000005086 61.0
BYD3_k127_3189615_96 deoxyhypusine monooxygenase activity - - - 0.000002191 61.0
BYD3_k127_3189615_97 - - - - 0.00001297 57.0
BYD3_k127_3189615_98 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00008475 53.0
BYD3_k127_3299047_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331,K03940 - 1.6.5.3,1.6.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003426 304.0
BYD3_k127_3299047_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002351 296.0
BYD3_k127_3299047_2 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006765 282.0
BYD3_k127_3299047_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 0.000000000000000000000000000000000009149 139.0
BYD3_k127_3299047_4 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.00000000000000000000000000000001096 130.0
BYD3_k127_3329092_0 topoisomerase K02469 - 5.99.1.3 1.784e-279 880.0
BYD3_k127_3329092_1 COG0187 Type IIA topoisomerase (DNA gyrase topo II topoisomerase IV) B subunit K02470,K02622 - 5.99.1.3 3.504e-277 867.0
BYD3_k127_3329092_10 Pyridoxal-dependent decarboxylase conserved domain K01593,K01634 - 4.1.1.105,4.1.1.28,4.1.2.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001386 548.0
BYD3_k127_3329092_11 Peptidase, M61 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005901 579.0
BYD3_k127_3329092_12 Peptidase, M16 K07263 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001845 534.0
BYD3_k127_3329092_13 Mismatch repair ATPase (MutS family) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001121 534.0
BYD3_k127_3329092_14 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006732 504.0
BYD3_k127_3329092_15 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 GO:0003674,GO:0003824,GO:0004478,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016740,GO:0016765,GO:0044424,GO:0044444,GO:0044464 2.5.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006244 485.0
BYD3_k127_3329092_16 involved in signal transduction (via phosphorylation) involved in transcriptional regulatory mechanism and in the regulation of secondary metabolites catalytic activity ATP a protein ADP a phosphoprotein K08282 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001162 514.0
BYD3_k127_3329092_17 Belongs to the heme-copper respiratory oxidase family K02274 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002614 476.0
BYD3_k127_3329092_18 Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR) K01589 - 6.3.4.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001096 464.0
BYD3_k127_3329092_19 Major facilitator K06902 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005143 449.0
BYD3_k127_3329092_2 Flavin containing amine oxidoreductase - - - 6.59e-275 852.0
BYD3_k127_3329092_20 KaiC K08482 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002143 449.0
BYD3_k127_3329092_21 TIGRFAM phytoene desaturase K10027 - 1.3.99.26,1.3.99.28,1.3.99.29,1.3.99.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003076 449.0
BYD3_k127_3329092_22 radical SAM domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001836 419.0
BYD3_k127_3329092_23 FAD linked oxidases, C-terminal domain K00803 - 2.5.1.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000476 424.0
BYD3_k127_3329092_24 Argininosuccinate lyase C-terminal K01755 - 4.3.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002993 417.0
BYD3_k127_3329092_25 nitric oxide dioxygenase activity K00523,K15983 - 1.14.13.142,1.17.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001283 405.0
BYD3_k127_3329092_26 Peptidase, M16 K07263 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001707 413.0
BYD3_k127_3329092_27 ATP phosphoribosyltransferase K00765 - 2.4.2.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007809 401.0
BYD3_k127_3329092_28 PFAM Glycosyl transferase, group 1 K00754 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001856 381.0
BYD3_k127_3329092_29 Glucose / Sorbosone dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004146 371.0
BYD3_k127_3329092_3 Aldehyde dehydrogenase family K00294 - 1.2.1.88 3.922e-235 739.0
BYD3_k127_3329092_30 Aminotransferase class I and II - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005286 373.0
BYD3_k127_3329092_31 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 - 1.1.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000171 355.0
BYD3_k127_3329092_32 PQQ-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001863 352.0
BYD3_k127_3329092_33 transport, permease protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001096 349.0
BYD3_k127_3329092_34 PFAM ABC transporter K01990,K09695 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002968 329.0
BYD3_k127_3329092_35 Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system K02017 - 3.6.3.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003659 327.0
BYD3_k127_3329092_36 metal-dependent hydrolase with the TIM-barrel fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002626 329.0
BYD3_k127_3329092_37 Carboxypeptidase regulatory-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009006 332.0
BYD3_k127_3329092_38 NYN domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007851 311.0
BYD3_k127_3329092_39 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001264 303.0
BYD3_k127_3329092_4 antibiotic biosynthetic process K01434 - 3.5.1.11 2.707e-201 655.0
BYD3_k127_3329092_40 transport, permease protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001039 302.0
BYD3_k127_3329092_41 ATPase activity K01990,K13926 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004732 288.0
BYD3_k127_3329092_42 Imidazoleglycerol-phosphate dehydratase K01693 - 4.2.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008564 283.0
BYD3_k127_3329092_43 Catalyzes the ferrous insertion into protoporphyrin IX K01772 GO:0003674,GO:0003824,GO:0004325,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.99.1.1,4.99.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002321 277.0
BYD3_k127_3329092_44 PFAM binding-protein-dependent transport systems inner membrane component K02018 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000375 270.0
BYD3_k127_3329092_45 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000009137 268.0
BYD3_k127_3329092_46 Cytochrome C oxidase subunit II, periplasmic domain K02275 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000001326 266.0
BYD3_k127_3329092_47 Protein of unknown function (DUF1501) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002399 267.0
BYD3_k127_3329092_48 epimerase dehydratase K07071 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003274 257.0
BYD3_k127_3329092_49 - K06921 - - 0.000000000000000000000000000000000000000000000000000000000000000000000006346 256.0
BYD3_k127_3329092_5 Belongs to the isocitrate and isopropylmalate dehydrogenases family K00031 - 1.1.1.42 9.911e-199 625.0
BYD3_k127_3329092_50 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000001442 258.0
BYD3_k127_3329092_51 Bacterial extracellular solute-binding protein K02020 - - 0.0000000000000000000000000000000000000000000000000000000000000000000008032 244.0
BYD3_k127_3329092_52 Belongs to the HisA HisF family K01814 - 5.3.1.16 0.000000000000000000000000000000000000000000000000000000000000000000002121 245.0
BYD3_k127_3329092_53 FAD dependent oxidoreductase K03153 - 1.4.3.19 0.000000000000000000000000000000000000000000000000000000000000000000006383 247.0
BYD3_k127_3329092_54 Protein of unknown function (DUF1800) - - - 0.000000000000000000000000000000000000000000000000000000000000000005885 244.0
BYD3_k127_3329092_55 PFAM Asparaginase K01424 - 3.5.1.1 0.0000000000000000000000000000000000000000000000000000000000000008509 234.0
BYD3_k127_3329092_56 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.00000000000000000000000000000000000000000000000000000000000002352 220.0
BYD3_k127_3329092_57 Las17-binding protein actin regulator - - - 0.000000000000000000000000000000000000000000000000000000000001634 220.0
BYD3_k127_3329092_58 deacetylase K01463 - - 0.000000000000000000000000000000000000000000000000000000000002234 219.0
BYD3_k127_3329092_59 DinB family - - - 0.00000000000000000000000000000000000000000000000000000000002182 210.0
BYD3_k127_3329092_6 Sodium:solute symporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003577 622.0
BYD3_k127_3329092_60 Cytochrome c oxidase subunit III K02276 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000007338 212.0
BYD3_k127_3329092_61 Conserved hypothetical protein (DUF2461) - - - 0.00000000000000000000000000000000000000000000000000000003281 205.0
BYD3_k127_3329092_62 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.0000000000000000000000000000000000000000000000000000002227 204.0
BYD3_k127_3329092_63 Belongs to the LOG family K06966 - 3.2.2.10 0.0000000000000000000000000000000000000000000000000000009606 200.0
BYD3_k127_3329092_64 HlyD family secretion protein K01993 - - 0.00000000000000000000000000000000000000000000000003558 198.0
BYD3_k127_3329092_65 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.000000000000000000000000000000000000000000000000151 181.0
BYD3_k127_3329092_66 May be involved in cell division - - - 0.00000000000000000000000000000000000000002981 165.0
BYD3_k127_3329092_67 Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP K11755 - 3.5.4.19,3.6.1.31 0.000000000000000000000000000000000000103 147.0
BYD3_k127_3329092_68 TOBE domain - - - 0.0000000000000000000000000000000004346 136.0
BYD3_k127_3329092_69 FAD dependent oxidoreductase - - - 0.000000000000000000000000000000004037 144.0
BYD3_k127_3329092_7 PFAM FAD linked oxidase domain protein K00104 - 1.1.3.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001939 590.0
BYD3_k127_3329092_70 BMC - - - 0.000000000000000000000000000000007905 129.0
BYD3_k127_3329092_71 Histidine kinase - - - 0.0000000000000000000000000005564 120.0
BYD3_k127_3329092_72 Gcn5-related n-acetyltransferase - - - 0.0000000000000000000000137 104.0
BYD3_k127_3329092_74 Lysin motif - - - 0.00000000000000000000003436 104.0
BYD3_k127_3329092_75 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000009706 101.0
BYD3_k127_3329092_76 - - - - 0.00000000000000000001301 96.0
BYD3_k127_3329092_77 outer membrane efflux protein - - - 0.000000000000000002842 99.0
BYD3_k127_3329092_79 - - - - 0.00000000000000009118 91.0
BYD3_k127_3329092_8 M61 glycyl aminopeptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003736 568.0
BYD3_k127_3329092_80 Belongs to the 'phage' integrase family - - - 0.0000000000000002405 82.0
BYD3_k127_3329092_81 helix_turn_helix, mercury resistance - - - 0.0000000000000003083 88.0
BYD3_k127_3329092_82 Putative phosphatase (DUF442) - - - 0.00000000000001441 83.0
BYD3_k127_3329092_83 hyperosmotic response - - - 0.00000000000008787 83.0
BYD3_k127_3329092_84 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K04750 - - 0.0000000000008177 78.0
BYD3_k127_3329092_85 FKBP-type peptidyl-prolyl cis-trans isomerase K01802,K03772 - 5.2.1.8 0.0000000001231 61.0
BYD3_k127_3329092_86 Calcium/calmodulin dependent protein kinase II association domain - - - 0.0000000004385 67.0
BYD3_k127_3329092_87 Site-specific recombinases, DNA invertase Pin homologs - - - 0.000000001489 63.0
BYD3_k127_3329092_88 ECF sigma factor - - - 0.000000001621 64.0
BYD3_k127_3329092_89 Response regulator, receiver K13246 - 3.1.4.52 0.00000001782 63.0
BYD3_k127_3329092_9 MatE - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005035 555.0
BYD3_k127_3329092_90 Prokaryotic Cytochrome C oxidase subunit IV K02277 - 1.9.3.1 0.0000004241 55.0
BYD3_k127_3329092_91 Methyltransferase K15256 - - 0.0000009996 59.0
BYD3_k127_3329092_92 PFAM KaiB domain K08481 - - 0.000001436 56.0
BYD3_k127_3329092_93 Insulinase (Peptidase family M16) K07263 - - 0.000003419 58.0
BYD3_k127_3329092_94 Protein conserved in bacteria - - - 0.00006038 51.0
BYD3_k127_3329092_95 OmpA-like transmembrane domain K16079 GO:0005575,GO:0005623,GO:0009279,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0044462,GO:0044464,GO:0071944 - 0.0007289 49.0
BYD3_k127_3408334_0 WD40-like Beta Propeller Repeat K03641,K07277 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005613 540.0
BYD3_k127_3408334_1 PFAM Acetyl-CoA hydrolase transferase K01067 - 3.1.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001082 494.0
BYD3_k127_3408334_10 - - - - 0.000000000000000000000000000000000000000000004629 172.0
BYD3_k127_3408334_11 DinB family - - - 0.00000000000000000000000000000000000000000001638 170.0
BYD3_k127_3408334_12 Thioredoxin-like K02199 - - 0.000000000000000000000000005332 119.0
BYD3_k127_3408334_13 COG1512 Beta-propeller domains of methanol dehydrogenase type K06872 - - 0.00000000000000000000001992 114.0
BYD3_k127_3408334_14 - - - - 0.000000000000000004677 87.0
BYD3_k127_3408334_15 nucleotidyltransferase activity - - - 0.000000000000000006761 92.0
BYD3_k127_3408334_16 - - - - 0.0000000000000004018 93.0
BYD3_k127_3408334_17 Protein of unknown function (DUF1572) - - - 0.000000000000001375 87.0
BYD3_k127_3408334_2 Serine aminopeptidase, S33 K07019 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004258 302.0
BYD3_k127_3408334_3 POT family K03305 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005339 275.0
BYD3_k127_3408334_4 Protein of unknown function DUF72 - - - 0.0000000000000000000000000000000000000000000000000000000000000000001024 238.0
BYD3_k127_3408334_5 Endonuclease/Exonuclease/phosphatase family - - - 0.0000000000000000000000000000000000000000000000000000000000007342 224.0
BYD3_k127_3408334_6 ATP dependent DNA ligase domain protein K01971 - 6.5.1.1 0.000000000000000000000000000000000000000000000000000000001055 211.0
BYD3_k127_3408334_7 Uncharacterised protein family UPF0052 - - - 0.00000000000000000000000000000000000000000000000000000001209 211.0
BYD3_k127_3408334_8 LemA family K03744 - - 0.0000000000000000000000000000000000000000000000000004112 190.0
BYD3_k127_3408334_9 PFAM Copper binding periplasmic protein CusF K07152 - - 0.00000000000000000000000000000000000000000000005221 181.0
BYD3_k127_3418046_0 phosphatase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003697 365.0
BYD3_k127_3471913_0 COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002154 520.0
BYD3_k127_3471913_1 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000106 475.0
BYD3_k127_3471913_10 Glycosyltransferase family 9 (heptosyltransferase) K02527,K02841,K02843,K12982 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.00000000000000000000000000000000000000000000000004667 191.0
BYD3_k127_3471913_11 rhs family - - - 0.000000000000000000000000000000000000000000000005349 199.0
BYD3_k127_3471913_12 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.00000000000000000000000000000000000000000000000722 195.0
BYD3_k127_3471913_13 Kdo2-lipid A biosynthetic process K02517 - 2.3.1.241 0.00000000000000000000000000000000000000000000252 176.0
BYD3_k127_3471913_14 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000003515 169.0
BYD3_k127_3471913_15 PFAM SAF domain K02279 - - 0.000000000000000000000000000000000000001756 158.0
BYD3_k127_3471913_16 Peptidase A24A, prepilin type IV K02278 - 3.4.23.43 0.000000000000000000000001689 113.0
BYD3_k127_3471913_18 Pilus formation protein N terminal region K02280 - - 0.0000000000000000000003467 103.0
BYD3_k127_3471913_19 Uncharacterized ACR, COG1430 K09005 - - 0.0000000000000000001714 94.0
BYD3_k127_3471913_2 Belongs to the phosphoglycerate kinase family K00927 - 2.7.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000235 438.0
BYD3_k127_3471913_20 Phospholipid methyltransferase - - - 0.00000000000000001115 89.0
BYD3_k127_3471913_21 Preprotein translocase SecG subunit K03075 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006616,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0022857,GO:0022884,GO:0031522,GO:0032978,GO:0032991,GO:0033036,GO:0033365,GO:0034613,GO:0042886,GO:0042887,GO:0043952,GO:0044464,GO:0045047,GO:0045184,GO:0046907,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0061024,GO:0065002,GO:0070727,GO:0070972,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0071944,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:1904680 - 0.00000000000009435 75.0
BYD3_k127_3471913_22 COG1404 Subtilisin-like serine proteases - - - 0.000000000002008 82.0
BYD3_k127_3471913_23 phosphorelay signal transduction system K07315 - 3.1.3.3 0.0000000001926 70.0
BYD3_k127_3471913_24 Subtilase family - - - 0.0000000002845 75.0
BYD3_k127_3471913_25 - - - - 0.00000002131 62.0
BYD3_k127_3471913_26 TadE-like protein - - - 0.000001008 61.0
BYD3_k127_3471913_28 Matrixin - - - 0.0001546 56.0
BYD3_k127_3471913_3 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004297 338.0
BYD3_k127_3471913_4 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002047 325.0
BYD3_k127_3471913_5 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 GO:0003674,GO:0003824,GO:0004807,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006066,GO:0006071,GO:0006081,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0018130,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019400,GO:0019405,GO:0019438,GO:0019439,GO:0019563,GO:0019637,GO:0019682,GO:0019693,GO:0019751,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044262,GO:0044270,GO:0044271,GO:0044275,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046164,GO:0046166,GO:0046174,GO:0046184,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901615,GO:1901616 5.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003449 300.0
BYD3_k127_3471913_6 Transcriptional regulator, Fis family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001313 266.0
BYD3_k127_3471913_7 Bifunctional protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000009002 258.0
BYD3_k127_3471913_8 D,D-heptose 1,7-bisphosphate phosphatase K02841,K02843,K02849,K03271,K03272,K03273 - 2.7.1.167,2.7.7.70,3.1.3.82,3.1.3.83,5.3.1.28 0.00000000000000000000000000000000000000000000000000000000002199 222.0
BYD3_k127_3471913_9 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose - - - 0.00000000000000000000000000000000000000000000000002089 184.0
BYD3_k127_3668916_0 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000000001914 149.0
BYD3_k127_3668916_1 Tetratricopeptide repeat - - - 0.00000000000000000000001422 113.0
BYD3_k127_3668916_2 Tetratricopeptide repeats K12132 - 2.7.11.1 0.00001129 57.0
BYD3_k127_3683849_0 Urate oxidase N-terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003876 597.0
BYD3_k127_3683849_1 Protein of unknown function (DUF1501) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009698 540.0
BYD3_k127_3683849_10 NHL repeat - - - 0.0000000000000000000000000000000000000000000000007274 189.0
BYD3_k127_3683849_11 alpha/beta hydrolase fold - - - 0.00000000000000000000000000000000002549 145.0
BYD3_k127_3683849_12 - - - - 0.0000000000000000000141 96.0
BYD3_k127_3683849_14 Endoribonuclease L-PSP - - - 0.000000004647 69.0
BYD3_k127_3683849_2 Carbohydrate family 9 binding domain-like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000456 413.0
BYD3_k127_3683849_3 TonB dependent receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001089 386.0
BYD3_k127_3683849_4 Carboxypeptidase regulatory-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001015 362.0
BYD3_k127_3683849_5 Carboxypeptidase regulatory-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005227 355.0
BYD3_k127_3683849_6 Alpha/beta hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002055 308.0
BYD3_k127_3683849_7 metal-dependent hydrolase with the TIM-barrel fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002394 308.0
BYD3_k127_3683849_8 Glucose / Sorbosone dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004651 302.0
BYD3_k127_3683849_9 repeat protein - - - 0.0000000000000000000000000000000000000000000000000000000000005625 230.0
BYD3_k127_3735142_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.0 1085.0
BYD3_k127_3735142_1 Carboxypeptidase regulatory-like domain - - - 0.0 1068.0
BYD3_k127_3735142_10 PEP-utilising enzyme, mobile domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001951 488.0
BYD3_k127_3735142_11 Fumarase C C-terminus K01744 - 4.3.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003313 480.0
BYD3_k127_3735142_12 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009289 473.0
BYD3_k127_3735142_13 Outer membrane protein beta-barrel family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007119 467.0
BYD3_k127_3735142_14 Peptidase, M16 K07263 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000536 434.0
BYD3_k127_3735142_15 Tannase and feruloyl esterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001087 428.0
BYD3_k127_3735142_16 Protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006582 394.0
BYD3_k127_3735142_17 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain K01781 - 5.1.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002744 392.0
BYD3_k127_3735142_18 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003539 388.0
BYD3_k127_3735142_19 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006757 374.0
BYD3_k127_3735142_2 Multicopper oxidase - - - 0.0 1035.0
BYD3_k127_3735142_20 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001127 380.0
BYD3_k127_3735142_21 CARDB domain-containing protein,subtilase family protease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006117 385.0
BYD3_k127_3735142_22 Protein involved in outer membrane biogenesis - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001685 358.0
BYD3_k127_3735142_23 Insulinase (Peptidase family M16) K07263 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005301 353.0
BYD3_k127_3735142_24 TOBE domain K02010 - 3.6.3.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003537 345.0
BYD3_k127_3735142_25 Fatty acid hydroxylase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004 343.0
BYD3_k127_3735142_26 thiolester hydrolase activity K01179,K06889,K10773,K15853 - 3.2.1.4,4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001334 336.0
BYD3_k127_3735142_27 Possible lysine decarboxylase K06966 - 3.2.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001851 331.0
BYD3_k127_3735142_28 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001753 348.0
BYD3_k127_3735142_29 Major facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006331 338.0
BYD3_k127_3735142_3 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 6.96e-282 889.0
BYD3_k127_3735142_30 PFAM Amidase K02433 - 6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000107 324.0
BYD3_k127_3735142_31 PFAM Peptidase M16 inactive domain K07263 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009526 306.0
BYD3_k127_3735142_32 lipid A export permease ATP-binding protein MsbA K11085 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007324 308.0
BYD3_k127_3735142_33 domain, Protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003667 300.0
BYD3_k127_3735142_34 Phosphomethylpyrimidine kinase K00868,K00941,K03147,K21219 GO:0008150,GO:0040007 2.5.1.3,2.7.1.35,2.7.1.49,2.7.4.7,4.1.99.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001722 285.0
BYD3_k127_3735142_35 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005928 284.0
BYD3_k127_3735142_36 Pyruvate phosphate dikinase, PEP/pyruvate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000008399 270.0
BYD3_k127_3735142_37 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000076 259.0
BYD3_k127_3735142_38 Insulinase (Peptidase family M16) K07263 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001789 269.0
BYD3_k127_3735142_39 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003528 256.0
BYD3_k127_3735142_4 receptor K16090 - - 5.236e-251 797.0
BYD3_k127_3735142_40 Metallo-beta-lactamase superfamily K17837 - 3.5.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000002286 254.0
BYD3_k127_3735142_41 Class II Aldolase and Adducin N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004242 249.0
BYD3_k127_3735142_42 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains K02667 - - 0.00000000000000000000000000000000000000000000000000000000000000000000506 249.0
BYD3_k127_3735142_43 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.00000000000000000000000000000000000000000000000000000000000001417 224.0
BYD3_k127_3735142_44 Belongs to the helicase family. UvrD subfamily K16898 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000003974 241.0
BYD3_k127_3735142_45 DNA polymerase alpha chain like domain K07053 - 3.1.3.97 0.0000000000000000000000000000000000000000000000000000000008797 212.0
BYD3_k127_3735142_46 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain K00567 - 2.1.1.63 0.000000000000000000000000000000000000000000000000007937 190.0
BYD3_k127_3735142_47 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 - 2.1.1.297 0.00000000000000000000000000000000000000000000000002101 190.0
BYD3_k127_3735142_48 PFAM Histidine triad (HIT) protein K02503 - - 0.000000000000000000000000000000000000000000002232 170.0
BYD3_k127_3735142_49 - - - - 0.00000000000000000000000000000000000000000002393 176.0
BYD3_k127_3735142_5 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 3.176e-246 779.0
BYD3_k127_3735142_50 - - - - 0.00000000000000000000000000000000000000001344 165.0
BYD3_k127_3735142_51 KR domain - - - 0.00000000000000000000000000000000000000003127 162.0
BYD3_k127_3735142_52 endoribonuclease L-PSP K09022 - 3.5.99.10 0.0000000000000000000000000000000000000002474 156.0
BYD3_k127_3735142_53 - - - - 0.000000000000000000000000000000000000001019 159.0
BYD3_k127_3735142_54 Acetyltransferase (GNAT) domain K17840 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0008080,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0016020,GO:0016137,GO:0016139,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0016999,GO:0017001,GO:0017144,GO:0030647,GO:0030649,GO:0034069,GO:0044237,GO:0044248,GO:0044464,GO:0047921,GO:0071704,GO:0071944,GO:1901135,GO:1901136,GO:1901575,GO:1901657,GO:1901658 2.3.1.59 0.000000000000000000000000000000000000001338 154.0
BYD3_k127_3735142_55 - - - - 0.00000000000000000000000000000000000003278 158.0
BYD3_k127_3735142_56 - - - - 0.0000000000000000000000000000000000001321 151.0
BYD3_k127_3735142_57 PFAM BioY protein K03523 - - 0.000000000000000000000000000000000001129 148.0
BYD3_k127_3735142_58 Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin K21142 - 2.8.1.12 0.00000000000000000000000000000000001768 141.0
BYD3_k127_3735142_59 PFAM NUDIX hydrolase K01515 - 3.6.1.13 0.0000000000000000000000000000000002555 141.0
BYD3_k127_3735142_6 Catalyzes the reversible hydration of fumarate to (S)- malate K01676 - 4.2.1.2 3.176e-229 721.0
BYD3_k127_3735142_60 Methyltransferase domain - - - 0.0000000000000000000000000000000005571 140.0
BYD3_k127_3735142_61 Belongs to the HesB IscA family K15724 - - 0.0000000000000000000000000000001313 126.0
BYD3_k127_3735142_62 This protein specifically catalyzes the removal of signal peptides from prolipoproteins - - - 0.0000000000000000000000000000001524 131.0
BYD3_k127_3735142_63 COG3857 ATP-dependent nuclease, subunit B K16899 - 3.6.4.12 0.0000000000000000000000000000003188 143.0
BYD3_k127_3735142_64 PFAM beta-lactamase domain protein K02238 - - 0.0000000000000000000000000000008466 135.0
BYD3_k127_3735142_65 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K07141 - 2.7.7.76 0.000000000000000000000000000002431 129.0
BYD3_k127_3735142_66 Belongs to the Fur family K03711 - - 0.00000000000000000000000007596 119.0
BYD3_k127_3735142_67 PFAM YeeE YedE family (DUF395) K07112 - - 0.000000000000000000000001481 108.0
BYD3_k127_3735142_68 PFAM YeeE YedE family (DUF395) K07112 - - 0.0000000000000000000002068 104.0
BYD3_k127_3735142_69 - - - - 0.0000000000000000000005244 106.0
BYD3_k127_3735142_7 Binding-protein-dependent transport system inner membrane component K02011 - - 2.772e-199 636.0
BYD3_k127_3735142_70 PFAM Biopolymer transport protein ExbD TolR K03559,K03560 - - 0.00000000000000000001013 100.0
BYD3_k127_3735142_71 Belongs to the bacterial ribosomal protein bL28 family K02902 GO:0003674,GO:0003735,GO:0005198 - 0.00000000000000000001882 92.0
BYD3_k127_3735142_72 Histidine kinase - - - 0.0000000000000000003582 100.0
BYD3_k127_3735142_73 Haloacid dehalogenase-like hydrolase K07025 - - 0.0000000000000003825 88.0
BYD3_k127_3735142_74 phosphorelay signal transduction system - - - 0.0000000000000007034 84.0
BYD3_k127_3735142_75 Prokaryotic dksA/traR C4-type zinc finger K06204 - - 0.0000000000000008049 83.0
BYD3_k127_3735142_76 transcription factor binding - - - 0.000000000000005222 87.0
BYD3_k127_3735142_77 - - - - 0.00000000000001974 79.0
BYD3_k127_3735142_78 - - - - 0.000000000001359 72.0
BYD3_k127_3735142_79 COG1278 Cold shock K03704 - - 0.000000000002212 71.0
BYD3_k127_3735142_8 pyrroloquinoline quinone binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006663 582.0
BYD3_k127_3735142_80 Mo-molybdopterin cofactor metabolic process K03636,K03637,K03752,K21142 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006732,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0018130,GO:0019538,GO:0019637,GO:0019720,GO:0043170,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0051189,GO:0071704,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.7.77,2.8.1.12,4.6.1.17 0.00000000002333 70.0
BYD3_k127_3735142_81 Cold-shock protein K03704 - - 0.00000000005176 67.0
BYD3_k127_3735142_82 - - - - 0.00000000007246 70.0
BYD3_k127_3735142_83 - - - - 0.00000000007549 70.0
BYD3_k127_3735142_84 Part of the ABC transporter complex LolCDE involved in the translocation of K09810 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0015399,GO:0015405,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0034613,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0043167,GO:0043168,GO:0043492,GO:0044425,GO:0044459,GO:0044464,GO:0044872,GO:0044873,GO:0044874,GO:0051179,GO:0051234,GO:0051641,GO:0055085,GO:0070727,GO:0071944,GO:0072657,GO:0089705,GO:0097159,GO:0097367,GO:0098796,GO:0098797,GO:1901265,GO:1901363,GO:1990778 - 0.0000003248 60.0
BYD3_k127_3735142_85 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.000004553 55.0
BYD3_k127_3735142_87 Biopolymer transport protein ExbD/TolR K03559,K03560 - - 0.00001321 49.0
BYD3_k127_3735142_88 protein O-GlcNAc transferase activity K09667 GO:0000003,GO:0000123,GO:0000785,GO:0000791,GO:0001678,GO:0001932,GO:0001933,GO:0001934,GO:0002119,GO:0002164,GO:0002237,GO:0003674,GO:0003824,GO:0004721,GO:0004722,GO:0005488,GO:0005515,GO:0005543,GO:0005547,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005737,GO:0005739,GO:0005829,GO:0005886,GO:0005975,GO:0005976,GO:0005977,GO:0006040,GO:0006041,GO:0006047,GO:0006048,GO:0006073,GO:0006091,GO:0006109,GO:0006110,GO:0006111,GO:0006112,GO:0006139,GO:0006140,GO:0006325,GO:0006355,GO:0006357,GO:0006464,GO:0006470,GO:0006473,GO:0006475,GO:0006479,GO:0006486,GO:0006493,GO:0006508,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006915,GO:0006996,GO:0007005,GO:0007154,GO:0007165,GO:0007275,GO:0007399,GO:0007417,GO:0007420,GO:0007444,GO:0007584,GO:0007610,GO:0007622,GO:0007623,GO:0007626,GO:0008080,GO:0008134,GO:0008150,GO:0008152,GO:0008194,GO:0008213,GO:0008219,GO:0008289,GO:0008361,GO:0008375,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009226,GO:0009605,GO:0009607,GO:0009617,GO:0009636,GO:0009719,GO:0009725,GO:0009743,GO:0009746,GO:0009749,GO:0009791,GO:0009888,GO:0009889,GO:0009891,GO:0009892,GO:0009893,GO:0009894,GO:0009895,GO:0009966,GO:0009987,GO:0009991,GO:0010033,GO:0010243,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010562,GO:0010563,GO:0010604,GO:0010605,GO:0010628,GO:0010638,GO:0010646,GO:0010675,GO:0010799,GO:0010801,GO:0010876,GO:0010906,GO:0010941,GO:0012501,GO:0012505,GO:0015980,GO:0016020,GO:0016043,GO:0016262,GO:0016311,GO:0016407,GO:0016410,GO:0016485,GO:0016569,GO:0016570,GO:0016571,GO:0016573,GO:0016579,GO:0016740,GO:0016746,GO:0016747,GO:0016757,GO:0016758,GO:0016787,GO:0016788,GO:0016791,GO:0018022,GO:0018023,GO:0018130,GO:0018193,GO:0018205,GO:0018393,GO:0018394,GO:0019219,GO:0019220,GO:0019222,GO:0019438,GO:0019538,GO:0019725,GO:0019904,GO:0019915,GO:0022607,GO:0023051,GO:0023052,GO:0030141,GO:0030162,GO:0030246,GO:0030808,GO:0030811,GO:0030900,GO:0031056,GO:0031058,GO:0031060,GO:0031062,GO:0031248,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031328,GO:0031329,GO:0031330,GO:0031396,GO:0031397,GO:0031399,GO:0031400,GO:0031401,GO:0031410,GO:0031667,GO:0031974,GO:0031981,GO:0031982,GO:0032259,GO:0032268,GO:0032269,GO:0032270,GO:0032386,GO:0032387,GO:0032434,GO:0032435,GO:0032496,GO:0032501,GO:0032502,GO:0032535,GO:0032868,GO:0032869,GO:0032870,GO:0032879,GO:0032880,GO:0032922,GO:0032991,GO:0033036,GO:0033043,GO:0033044,GO:0033135,GO:0033137,GO:0033157,GO:0033218,GO:0033500,GO:0033993,GO:0034284,GO:0034641,GO:0034645,GO:0034654,GO:0034968,GO:0035020,GO:0035091,GO:0035220,GO:0035295,GO:0035556,GO:0036094,GO:0036211,GO:0036477,GO:0040024,GO:0042176,GO:0042177,GO:0042221,GO:0042277,GO:0042325,GO:0042326,GO:0042327,GO:0042578,GO:0042588,GO:0042592,GO:0042593,GO:0042995,GO:0043005,GO:0043025,GO:0043167,GO:0043168,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043255,GO:0043412,GO:0043413,GO:0043414,GO:0043434,GO:0043467,GO:0043470,GO:0043543,GO:0043933,GO:0043967,GO:0043981,GO:0043982,GO:0043984,GO:0044042,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044267,GO:0044271,GO:0044281,GO:0044297,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0045475,GO:0045793,GO:0045861,GO:0045862,GO:0045893,GO:0045935,GO:0045936,GO:0045937,GO:0045944,GO:0046349,GO:0046483,GO:0046578,GO:0046626,GO:0048015,GO:0048017,GO:0048029,GO:0048311,GO:0048312,GO:0048471,GO:0048511,GO:0048512,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048585,GO:0048731,GO:0048856,GO:0048878,GO:0050789,GO:0050794,GO:0050896,GO:0051049,GO:0051051,GO:0051056,GO:0051128,GO:0051130,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051179,GO:0051193,GO:0051196,GO:0051223,GO:0051224,GO:0051235,GO:0051246,GO:0051247,GO:0051248,GO:0051252,GO:0051254,GO:0051259,GO:0051260,GO:0051276,GO:0051291,GO:0051568,GO:0051604,GO:0051640,GO:0051641,GO:0051646,GO:0051704,GO:0051707,GO:0051716,GO:0055082,GO:0055086,GO:0055114,GO:0060255,GO:0060322,GO:0060341,GO:0060429,GO:0060548,GO:0061085,GO:0061087,GO:0061136,GO:0062012,GO:0065003,GO:0065007,GO:0065008,GO:0070013,GO:0070085,GO:0070201,GO:0070206,GO:0070207,GO:0070208,GO:0070646,GO:0070647,GO:0070887,GO:0071216,GO:0071219,GO:0071222,GO:0071310,GO:0071322,GO:0071326,GO:0071331,GO:0071333,GO:0071375,GO:0071396,GO:0071417,GO:0071495,GO:0071704,GO:0071840,GO:0071944,GO:0080090,GO:0080134,GO:0080135,GO:0080182,GO:0090066,GO:0090087,GO:0090313,GO:0090315,GO:0090317,GO:0097237,GO:0097363,GO:0097458,GO:0097708,GO:0099503,GO:0120025,GO:0140096,GO:1900037,GO:1900038,GO:1900076,GO:1900180,GO:1900182,GO:1900371,GO:1900542,GO:1901071,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1901799,GO:1901981,GO:1902275,GO:1902493,GO:1902494,GO:1902531,GO:1902680,GO:1903050,GO:1903051,GO:1903320,GO:1903321,GO:1903362,GO:1903363,GO:1903426,GO:1903428,GO:1903506,GO:1903508,GO:1903533,GO:1903578,GO:1903827,GO:1903828,GO:1903829,GO:1904950,GO:1905269,GO:1905475,GO:1905476,GO:1990234,GO:2000058,GO:2000059,GO:2000112,GO:2000377,GO:2000379,GO:2001141,GO:2001169,GO:2001252 2.4.1.255 0.00002505 56.0
BYD3_k127_3735142_9 ABC-type Fe3 transport system, periplasmic component K02012 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001291 488.0
BYD3_k127_3735142_90 Protein of unknown function, DUF488 - - - 0.0005371 47.0
BYD3_k127_3735142_91 - - - - 0.0009159 48.0
BYD3_k127_3771675_0 PFAM NAD-dependent epimerase dehydratase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007237 455.0
BYD3_k127_3771675_1 Glycosyl transferase WecB/TagA/CpsF family K05946 - 2.4.1.187 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009405 351.0
BYD3_k127_3817579_0 Glutamate synthase central domain K00265,K00284 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006520,GO:0006536,GO:0006537,GO:0006541,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0015930,GO:0016020,GO:0016053,GO:0016491,GO:0016638,GO:0019676,GO:0019740,GO:0019752,GO:0040007,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.4.1.13,1.4.1.14,1.4.7.1 0.0 2049.0
BYD3_k127_3817579_1 Glycogen debranching enzyme - - - 0.0 1556.0
BYD3_k127_3817579_10 Pyridine nucleotide-disulphide oxidoreductase, dimerisation K00382 - 1.8.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001557 614.0
BYD3_k127_3817579_101 - - - - 0.00009331 47.0
BYD3_k127_3817579_103 aspartic-type endopeptidase activity - - - 0.000572 52.0
BYD3_k127_3817579_104 Iron-sulfur cluster assembly protein K02612 - - 0.0008326 44.0
BYD3_k127_3817579_11 Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg- protoporphyrin IX K03405 - 6.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003091 614.0
BYD3_k127_3817579_12 PFAM L-carnitine dehydratase bile acid-inducible protein F K07749 - 2.8.3.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001127 581.0
BYD3_k127_3817579_13 secretion system protein K02283 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005303 544.0
BYD3_k127_3817579_14 von Willebrand factor (vWF) type A domain K07114 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002641 521.0
BYD3_k127_3817579_15 COG0277 FAD FMN-containing dehydrogenases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005235 517.0
BYD3_k127_3817579_16 Gentisate 1,2-dioxygenase K00450 - 1.13.11.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008329 501.0
BYD3_k127_3817579_17 Astacin (Peptidase family M12A) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003022 480.0
BYD3_k127_3817579_18 The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) K00627 GO:0003674,GO:0003824,GO:0004742,GO:0005488,GO:0005504,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006084,GO:0006085,GO:0006086,GO:0006090,GO:0006139,GO:0006163,GO:0006164,GO:0006637,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008289,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016407,GO:0016417,GO:0016418,GO:0016740,GO:0016746,GO:0016747,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019752,GO:0030523,GO:0031405,GO:0031406,GO:0032787,GO:0032991,GO:0033293,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0035383,GO:0035384,GO:0036094,GO:0043167,GO:0043168,GO:0043177,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045254,GO:0046390,GO:0046483,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0055086,GO:0071616,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0097159,GO:0140096,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901681,GO:1902494,GO:1990204 2.3.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001681 464.0
BYD3_k127_3817579_19 TonB dependent receptor K02014,K16089 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000085 455.0
BYD3_k127_3817579_2 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K18138 - - 0.0 1382.0
BYD3_k127_3817579_20 Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation K02232 - 6.3.5.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003831 441.0
BYD3_k127_3817579_21 Major facilitator K05819,K08195 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001565 427.0
BYD3_k127_3817579_22 ATPase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009454 422.0
BYD3_k127_3817579_23 2Fe-2S iron-sulfur cluster binding domain K00240 - 1.3.5.1,1.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003135 397.0
BYD3_k127_3817579_24 efflux transmembrane transporter activity K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004368 402.0
BYD3_k127_3817579_25 MacB-like periplasmic core domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007026 396.0
BYD3_k127_3817579_26 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001441 385.0
BYD3_k127_3817579_27 Two component, sigma54 specific, transcriptional regulator, Fis family K07712 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001015 380.0
BYD3_k127_3817579_28 Fumarylacetoacetate (FAA) hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009471 367.0
BYD3_k127_3817579_29 FecCD transport family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001007 365.0
BYD3_k127_3817579_3 Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00163 - 1.2.4.1 0.0 1378.0
BYD3_k127_3817579_30 Catalyzes the conversion of maleate to fumarate K01799 - 5.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002125 359.0
BYD3_k127_3817579_31 DNA methylase K00571 - 2.1.1.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001735 348.0
BYD3_k127_3817579_32 TonB-dependent Receptor Plug Domain K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006783 361.0
BYD3_k127_3817579_33 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00384 - 1.8.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001621 334.0
BYD3_k127_3817579_34 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003599 337.0
BYD3_k127_3817579_35 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001214 334.0
BYD3_k127_3817579_36 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002269 328.0
BYD3_k127_3817579_37 ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002576 324.0
BYD3_k127_3817579_38 PFAM PepSY-associated TM helix domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007113 321.0
BYD3_k127_3817579_39 PFAM fumarylacetoacetate (FAA) hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001004 303.0
BYD3_k127_3817579_4 Radical SAM - - - 0.0 1145.0
BYD3_k127_3817579_40 Belongs to the GSP D family K02280 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000054 308.0
BYD3_k127_3817579_41 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 - 4.3.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005955 292.0
BYD3_k127_3817579_42 cAMP biosynthetic process - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004237 296.0
BYD3_k127_3817579_43 Belongs to the UPF0173 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005814 271.0
BYD3_k127_3817579_44 TIGRFAM GTP cyclohydrolase I K01495 - 3.5.4.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000009409 260.0
BYD3_k127_3817579_45 uracil-DNA glycosylase K21929 - 3.2.2.27 0.00000000000000000000000000000000000000000000000000000000000000000000000002272 257.0
BYD3_k127_3817579_46 amine dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001072 261.0
BYD3_k127_3817579_47 PFAM Adenosylcobinamide amidohydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000009437 253.0
BYD3_k127_3817579_48 AAA domain, putative AbiEii toxin, Type IV TA system - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002077 249.0
BYD3_k127_3817579_49 - - - - 0.00000000000000000000000000000000000000000000000000000000000000006188 234.0
BYD3_k127_3817579_5 Fumarate reductase flavoprotein C-term K00239 - 1.3.5.1,1.3.5.4 7.091e-291 907.0
BYD3_k127_3817579_50 Periplasmic binding protein - - - 0.00000000000000000000000000000000000000000000000000000000000002522 228.0
BYD3_k127_3817579_51 Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group K02227 - 6.3.1.10 0.00000000000000000000000000000000000000000000000000000000000004678 231.0
BYD3_k127_3817579_52 helix_turn_helix, Lux Regulon K07684 - - 0.00000000000000000000000000000000000000000000000000000000000009401 220.0
BYD3_k127_3817579_53 membrane - - - 0.0000000000000000000000000000000000000000000000000000000000001078 222.0
BYD3_k127_3817579_54 Type VI secretion system effector, Hcp K11903 - - 0.00000000000000000000000000000000000000000000000000000000000544 211.0
BYD3_k127_3817579_55 Glycosyltransferase like family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000844 212.0
BYD3_k127_3817579_56 type II secretion system K12511 - - 0.0000000000000000000000000000000000000000000000000000000005009 213.0
BYD3_k127_3817579_57 YCII-related domain - - - 0.0000000000000000000000000000000000000000000000000000001006 198.0
BYD3_k127_3817579_58 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000001644 214.0
BYD3_k127_3817579_59 Type II secretion system K12510 - - 0.00000000000000000000000000000000000000000000000000002831 204.0
BYD3_k127_3817579_6 Transferrin receptor-like dimerisation domain K01301 - 3.4.17.21 2.872e-287 903.0
BYD3_k127_3817579_60 glycerophosphodiester phosphodiesterase activity K01126 - 3.1.4.46 0.0000000000000000000000000000000000000000000000000003986 193.0
BYD3_k127_3817579_61 integral membrane protein - - - 0.00000000000000000000000000000000000000000000000001867 186.0
BYD3_k127_3817579_62 Protein of unknown function (DUF1428) - - - 0.000000000000000000000000000000000000000000000009779 181.0
BYD3_k127_3817579_63 TIGRFAM Flp pilus assembly protein CpaB K02279 - - 0.0000000000000000000000000000000000000000000000313 181.0
BYD3_k127_3817579_64 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.0000000000000000000000000000000000000000000001319 186.0
BYD3_k127_3817579_65 ATP-dependent protease La (LON) substrate-binding domain K07157 - - 0.0000000000000000000000000000000000000000000004661 174.0
BYD3_k127_3817579_66 DinB superfamily K07552 - - 0.00000000000000000000000000000000000000000002246 167.0
BYD3_k127_3817579_67 SMART AAA ATPase K02450 - - 0.00000000000000000000000000000000000000000003136 178.0
BYD3_k127_3817579_68 Protein of unknown function (DUF1569) - - - 0.00000000000000000000000000000000000000000004564 165.0
BYD3_k127_3817579_69 PFAM Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain - - - 0.000000000000000000000000000000000000000001562 173.0
BYD3_k127_3817579_7 Flavin containing amine oxidoreductase K00266 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0008150,GO:0016020,GO:0040007,GO:0044424,GO:0044444,GO:0044464,GO:0071944 1.4.1.13,1.4.1.14 2.889e-236 737.0
BYD3_k127_3817579_70 AAA domain K02282 - - 0.000000000000000000000000000000000000000002602 171.0
BYD3_k127_3817579_71 WHG domain - - - 0.000000000000000000000000000000000000001013 155.0
BYD3_k127_3817579_72 Belongs to the NiCoT transporter (TC 2.A.52) family K07241 - - 0.000000000000000000000000000000000000001434 159.0
BYD3_k127_3817579_73 4Fe-4S dicluster domain K05524 - - 0.000000000000000000000000000000000000005109 147.0
BYD3_k127_3817579_74 YCII-related domain - - - 0.00000000000000000000000000000000000007929 149.0
BYD3_k127_3817579_75 TIR domain - - - 0.0000000000000000000000000000000000002529 152.0
BYD3_k127_3817579_76 Domain of unknown function (DUF4281) - - - 0.000000000000000000000000000000000000857 148.0
BYD3_k127_3817579_77 GAF domain - - - 0.000000000000000000000000000000000009164 155.0
BYD3_k127_3817579_78 Uncharacterised ArCR, COG2043 - - - 0.00000000000000000000000000000000004161 143.0
BYD3_k127_3817579_79 Carboxypeptidase regulatory-like domain - - - 0.00000000000000000000000000000000006362 143.0
BYD3_k127_3817579_8 Carboxypeptidase regulatory-like domain - - - 1.177e-209 691.0
BYD3_k127_3817579_80 - - - - 0.00000000000000000000000000000000009921 138.0
BYD3_k127_3817579_81 helix_turn_helix multiple antibiotic resistance protein - - - 0.00000000000000000000000000000000206 135.0
BYD3_k127_3817579_82 - - - - 0.000000000000000000000000000001115 141.0
BYD3_k127_3817579_83 Putative Flp pilus-assembly TadE/G-like - - - 0.000000000000000000000000000006813 133.0
BYD3_k127_3817579_84 Cytochrome c - - - 0.0000000000000000000000001447 112.0
BYD3_k127_3817579_85 PFAM Outer membrane efflux protein - - - 0.00000000000000000000002666 117.0
BYD3_k127_3817579_86 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions K01507 - 3.6.1.1 0.000000000000000000001884 104.0
BYD3_k127_3817579_87 PFAM cytochrome c oxidase subunit II K02275 - 1.9.3.1 0.0000000000003626 76.0
BYD3_k127_3817579_88 - - - - 0.000000000002524 70.0
BYD3_k127_3817579_89 Type IV leader peptidase family K02278 - 3.4.23.43 0.000000000004063 74.0
BYD3_k127_3817579_9 Belongs to the sigma-70 factor family. ECF subfamily - - - 6.191e-197 620.0
BYD3_k127_3817579_90 - - - - 0.00000000001741 76.0
BYD3_k127_3817579_91 - - - - 0.0000000002799 64.0
BYD3_k127_3817579_92 TadE-like protein - - - 0.000000003428 68.0
BYD3_k127_3817579_93 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.0000006648 61.0
BYD3_k127_3817579_94 Alpha amylase, catalytic domain - - - 0.000005543 51.0
BYD3_k127_3817579_96 - - - - 0.000007021 57.0
BYD3_k127_3817579_97 response regulator K02479 - - 0.00001511 54.0
BYD3_k127_3817579_98 zinc-ribbon domain - - - 0.00002677 57.0
BYD3_k127_3817579_99 - - - - 0.00004487 45.0
BYD3_k127_383931_0 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007597 361.0
BYD3_k127_383931_1 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004763 359.0
BYD3_k127_383931_2 Domain of unknown function (DUF4386) - - - 0.0000000000000000000000000000000000000003875 158.0
BYD3_k127_383931_3 PFAM Transposase IS116 IS110 IS902 family - - - 0.0000000000000000000000000002749 123.0
BYD3_k127_383931_4 PFAM transposase IS116 IS110 IS902 - - - 0.00000000000000000000000004059 117.0
BYD3_k127_383931_5 - - - - 0.00000000000000000000000007464 112.0
BYD3_k127_38495_0 DEAD/H associated K03724 - - 0.0 1448.0
BYD3_k127_38495_1 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.0 1236.0
BYD3_k127_38495_10 PFAM peptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003337 609.0
BYD3_k127_38495_11 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002745 598.0
BYD3_k127_38495_12 Glucose / Sorbosone dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003083 586.0
BYD3_k127_38495_13 Putative glutamine amidotransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001648 594.0
BYD3_k127_38495_14 Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs K04094 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 2.1.1.74 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008379 542.0
BYD3_k127_38495_15 Sigma-54 interaction domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004575 520.0
BYD3_k127_38495_16 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003168 515.0
BYD3_k127_38495_17 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003532 475.0
BYD3_k127_38495_18 Pfam:CPSase_L_chain K01961 - 6.3.4.14,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003046 465.0
BYD3_k127_38495_19 ATPase family associated with various cellular activities (AAA) K03924 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001407 428.0
BYD3_k127_38495_2 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1158.0
BYD3_k127_38495_20 X-Pro dipeptidyl-peptidase (S15 family) K01061 - 3.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008755 423.0
BYD3_k127_38495_21 Bacterial regulatory protein, Fis family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002071 426.0
BYD3_k127_38495_22 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002678 384.0
BYD3_k127_38495_23 Carbohydrate family 9 binding domain-like - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004799 391.0
BYD3_k127_38495_24 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002573 364.0
BYD3_k127_38495_25 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001381 301.0
BYD3_k127_38495_26 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K02535 GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008270,GO:0008610,GO:0008654,GO:0008759,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016787,GO:0016810,GO:0016811,GO:0019213,GO:0019637,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044464,GO:0046467,GO:0046493,GO:0046872,GO:0046914,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 3.5.1.108 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004374 297.0
BYD3_k127_38495_27 PFAM amino acid permease-associated region K03294 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006002 302.0
BYD3_k127_38495_28 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 - 2.2.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001361 286.0
BYD3_k127_38495_29 TamB, inner membrane protein subunit of TAM complex K09800 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001638 312.0
BYD3_k127_38495_3 peptidyl-tyrosine sulfation K01277 - 3.4.14.4 4.97e-276 865.0
BYD3_k127_38495_30 PFAM Response regulator receiver domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005798 262.0
BYD3_k127_38495_31 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 GO:0000166,GO:0000287,GO:0000502,GO:0003674,GO:0003824,GO:0004175,GO:0004298,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006807,GO:0006950,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009266,GO:0009376,GO:0009408,GO:0009628,GO:0009987,GO:0016043,GO:0016787,GO:0017076,GO:0019538,GO:0019904,GO:0022607,GO:0030163,GO:0030554,GO:0031597,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0034214,GO:0035639,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046872,GO:0050896,GO:0051259,GO:0051603,GO:0065003,GO:0070003,GO:0070011,GO:0071704,GO:0071840,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1902494,GO:1904949,GO:1905368,GO:1905369 3.4.25.2 0.0000000000000000000000000000000000000000000000000000000000000000000000001148 252.0
BYD3_k127_38495_32 Multi-sensor signal transduction histidine kinase K07710 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000001745 270.0
BYD3_k127_38495_33 tyrosine recombinase XerC K03733,K04763 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003599 264.0
BYD3_k127_38495_34 Surface antigen variable number - - - 0.000000000000000000000000000000000000000000000000000000000000000000001735 269.0
BYD3_k127_38495_35 OsmC-like protein - - - 0.000000000000000000000000000000000000000000000000000000000000000001896 231.0
BYD3_k127_38495_36 L,D-transpeptidase catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000001786 232.0
BYD3_k127_38495_37 Rossmann fold nucleotide-binding protein involved in DNA uptake K04096 - - 0.0000000000000000000000000000000000000000000000000000000000000001854 237.0
BYD3_k127_38495_38 glycosyl transferase, family 2 - - - 0.0000000000000000000000000000000000000000000000000000000001557 216.0
BYD3_k127_38495_39 - - - - 0.0000000000000000000000000000000000000000000000000000000004596 211.0
BYD3_k127_38495_4 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 1.194e-250 802.0
BYD3_k127_38495_40 PFAM ATP-binding region, ATPase domain protein domain protein K07683 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000009655 220.0
BYD3_k127_38495_41 PFAM ATP-binding region, ATPase domain protein K02668,K07708,K07709 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000002459 212.0
BYD3_k127_38495_42 C-terminus of AA_permease K03294 - - 0.000000000000000000000000000000000000000000000000005676 183.0
BYD3_k127_38495_43 Squalene--hopene cyclase - - - 0.0000000000000000000000000000000000000000000000001692 182.0
BYD3_k127_38495_44 Peptidase C14 caspase catalytic subunit p20 - - - 0.000000000000000000000000000000000000000000000000854 186.0
BYD3_k127_38495_45 Domain of unknown function (DUF4159) - - - 0.000000000000000000000000000000000000000000000147 183.0
BYD3_k127_38495_46 DinB superfamily - - - 0.0000000000000000000000000000000000000000000004823 172.0
BYD3_k127_38495_47 - - - - 0.000000000000000000000000000000000000000003969 161.0
BYD3_k127_38495_48 Phosphoribosyl transferase domain - - - 0.000000000000000000000000000000000000024 157.0
BYD3_k127_38495_49 transferase activity, transferring acyl groups other than amino-acyl groups K03466 - - 0.0000000000000000000000000000000000001963 156.0
BYD3_k127_38495_5 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - - 2.914e-244 764.0
BYD3_k127_38495_50 YCII-related domain K09780 - - 0.0000000000000000000000000000000000006332 141.0
BYD3_k127_38495_51 Cytidylyltransferase-like K00969 GO:0000309,GO:0003674,GO:0003824,GO:0004515,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.7.18 0.000000000000000000000000000000000001533 152.0
BYD3_k127_38495_52 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.000000000000000000000000000000000004448 157.0
BYD3_k127_38495_53 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000002003 143.0
BYD3_k127_38495_54 Protein of unknown function (DUF3014) - - - 0.00000000000000000000000000000000002046 145.0
BYD3_k127_38495_55 methylamine metabolic process K03885,K15977 - 1.6.99.3 0.0000000000000000000000000000000004822 137.0
BYD3_k127_38495_56 Belongs to the bacterial ribosomal protein bL27 family K02899 - - 0.00000000000000000000000000000002856 127.0
BYD3_k127_38495_57 Mycobacterial 4 TMS phage holin, superfamily IV K08972 - - 0.0000000000000000000000000003016 118.0
BYD3_k127_38495_58 Protein of unknown function (DUF1761) - - - 0.000000000000000000000000001839 115.0
BYD3_k127_38495_59 Protein of unknown function (DUF3565) - - - 0.00000000000000000000000001624 109.0
BYD3_k127_38495_6 Carboxyl transferase domain K01966 - 2.1.3.15,6.4.1.3 1.695e-243 761.0
BYD3_k127_38495_60 thymidylate kinase K00943 - 2.7.4.9 0.0000000000000000000000001369 116.0
BYD3_k127_38495_61 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.0000000000000000000000002815 111.0
BYD3_k127_38495_62 response regulator K02667 - - 0.0000000000000000000001778 104.0
BYD3_k127_38495_64 - - - - 0.0000000000000000002218 100.0
BYD3_k127_38495_65 Biotin-requiring enzyme - - - 0.000000000000000006264 91.0
BYD3_k127_38495_66 This protein binds to 23S rRNA in the presence of protein L20 K02888 GO:0003674,GO:0003735,GO:0005198 - 0.000000000000000006789 87.0
BYD3_k127_38495_67 Fibronectin type 3 domain - - - 0.0000000000000001419 93.0
BYD3_k127_38495_68 CAAX protease self-immunity - - - 0.00000002427 64.0
BYD3_k127_38495_7 PFAM sigma-54 factor interaction domain-containing protein K02584 - - 6.234e-227 719.0
BYD3_k127_38495_71 manganese ion transmembrane transporter activity - - - 0.00009547 56.0
BYD3_k127_38495_72 PFAM Sulfate transporter antisigma-factor antagonist STAS K04749 - - 0.000191 50.0
BYD3_k127_38495_73 TonB dependent receptor - - - 0.0005274 50.0
BYD3_k127_38495_8 PFAM Prolyl oligopeptidase family - - - 5.124e-218 695.0
BYD3_k127_38495_9 ABC transporter C-terminal domain K06158 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000593 625.0
BYD3_k127_3904994_0 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004991 336.0
BYD3_k127_3904994_1 Transcriptional regulator PadR-like family - - - 0.000000000000000000000000000000000007913 140.0
BYD3_k127_3904994_2 - - - - 0.0000000000000008657 86.0
BYD3_k127_39951_0 COGs COG0790 FOG TPR repeat SEL1 subfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005171 329.0
BYD3_k127_39951_1 RibD C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003848 292.0
BYD3_k127_39951_2 COG1670 acetyltransferases, including N-acetylases of ribosomal proteins - - - 0.000000000000000000000000000000000000000000011 168.0
BYD3_k127_39951_3 Putative glycolipid-binding K09957 - - 0.00000000000000000000000000000000001153 143.0
BYD3_k127_39951_4 lactoylglutathione lyase activity - - - 0.000000000000000000001097 100.0
BYD3_k127_39951_5 - - - - 0.0000000000000000007329 93.0
BYD3_k127_39951_6 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 - 2.7.7.6 0.000007952 49.0
BYD3_k127_39951_7 COG0790 FOG TPR repeat, SEL1 subfamily K07126 - - 0.0001022 55.0
BYD3_k127_39951_8 lactoylglutathione lyase activity - - - 0.000213 46.0
BYD3_k127_39951_9 - - - - 0.0003006 46.0
BYD3_k127_4022398_0 Epoxide hydrolase N terminus - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003657 492.0
BYD3_k127_4022398_1 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002433 444.0
BYD3_k127_4022398_2 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002859 270.0
BYD3_k127_4022398_3 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000000013 142.0
BYD3_k127_4022398_4 Cupin domain - - - 0.000000000000000000000000000000003201 133.0
BYD3_k127_4106070_0 Methionine synthase K00548 - 2.1.1.13 0.0 1732.0
BYD3_k127_4106070_1 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 0.0 1247.0
BYD3_k127_4106070_10 PD-(D/E)XK nuclease superfamily - - - 7.766e-229 749.0
BYD3_k127_4106070_11 Belongs to the UbiD family K03182,K16239 - 4.1.1.61,4.1.1.98 1.726e-225 713.0
BYD3_k127_4106070_12 PFAM Radical SAM - - - 8.699e-218 685.0
BYD3_k127_4106070_13 lysine biosynthetic process via aminoadipic acid - - - 5.868e-213 695.0
BYD3_k127_4106070_14 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 GO:0000096,GO:0000098,GO:0000166,GO:0003674,GO:0003824,GO:0004013,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006139,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009066,GO:0009068,GO:0009069,GO:0009087,GO:0009116,GO:0009119,GO:0009987,GO:0016020,GO:0016054,GO:0016787,GO:0016801,GO:0016802,GO:0017144,GO:0019752,GO:0019899,GO:0022610,GO:0030260,GO:0030312,GO:0033353,GO:0034641,GO:0035375,GO:0035635,GO:0036094,GO:0040007,GO:0042278,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044273,GO:0044281,GO:0044282,GO:0044403,GO:0044406,GO:0044409,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0044650,GO:0046085,GO:0046128,GO:0046395,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0048037,GO:0050662,GO:0051186,GO:0051287,GO:0051701,GO:0051704,GO:0051806,GO:0051828,GO:0055086,GO:0070403,GO:0071704,GO:0071944,GO:0072521,GO:0097159,GO:1901135,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606,GO:1901657 3.3.1.1 1.062e-212 671.0
BYD3_k127_4106070_15 Peptidase M16 K07263 - - 9.335e-212 692.0
BYD3_k127_4106070_16 lysine biosynthetic process via aminoadipic acid - - - 6.864e-204 662.0
BYD3_k127_4106070_17 oligoendopeptidase F K08602 - - 2.012e-197 635.0
BYD3_k127_4106070_18 Aminotransferase K14267,K14287 - 2.6.1.17,2.6.1.88 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002409 606.0
BYD3_k127_4106070_19 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003356 602.0
BYD3_k127_4106070_2 Pyridoxal-dependent decarboxylase, pyridoxal binding domain K01585 - 4.1.1.19 7.603e-307 951.0
BYD3_k127_4106070_20 COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL CutL homologs - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001188 580.0
BYD3_k127_4106070_21 L-lactate dehydrogenase K00101,K16422 - 1.1.2.3,1.1.3.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002024 514.0
BYD3_k127_4106070_22 lysine biosynthetic process via aminoadipic acid - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008069 540.0
BYD3_k127_4106070_23 TIGRFAM Cell shape determining protein MreB Mrl K03569 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001777 477.0
BYD3_k127_4106070_24 Metal binding domain of Ada K10778 - 2.1.1.63 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008484 479.0
BYD3_k127_4106070_25 Polysaccharide biosynthesis protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005976 460.0
BYD3_k127_4106070_26 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000141 441.0
BYD3_k127_4106070_27 Glucose dehydrogenase K00117,K05358 - 1.1.5.2,1.1.5.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001656 413.0
BYD3_k127_4106070_28 COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductases K00344 - 1.6.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005996 411.0
BYD3_k127_4106070_29 Mitochondrial biogenesis AIM24 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001317 392.0
BYD3_k127_4106070_3 Glutamine synthetase type III K01915 - 6.3.1.2 3.323e-300 939.0
BYD3_k127_4106070_30 Threonine synthase N terminus K01733 - 4.2.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002648 381.0
BYD3_k127_4106070_31 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001071 350.0
BYD3_k127_4106070_32 Integral membrane protein TerC family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009252 331.0
BYD3_k127_4106070_33 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K15727 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003093 336.0
BYD3_k127_4106070_34 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001345 323.0
BYD3_k127_4106070_35 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001725 318.0
BYD3_k127_4106070_36 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 2.7.1.33 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004499 316.0
BYD3_k127_4106070_37 metal-dependent hydrolase with the TIM-barrel fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000203 316.0
BYD3_k127_4106070_38 PFAM PepSY-associated TM helix domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001017 312.0
BYD3_k127_4106070_39 Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine K00684 - 2.3.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006117 297.0
BYD3_k127_4106070_4 UvrD/REP helicase N-terminal domain - - - 8.267e-295 945.0
BYD3_k127_4106070_40 Pregnancy-associated plasma protein-A - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008016 293.0
BYD3_k127_4106070_41 Domain of Unknown Function (DUF349) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003153 318.0
BYD3_k127_4106070_42 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004464 303.0
BYD3_k127_4106070_43 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K01802,K03767,K03768 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002544 283.0
BYD3_k127_4106070_44 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 GO:0003674,GO:0003824,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006573,GO:0006575,GO:0006732,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016874,GO:0016879,GO:0016881,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901564,GO:1901566,GO:1901576,GO:1901605 6.3.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004958 279.0
BYD3_k127_4106070_45 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000441 276.0
BYD3_k127_4106070_46 ADP-ribosylglycohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003928 277.0
BYD3_k127_4106070_47 tRNA synthetases class I (E and Q), catalytic domain K01894 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001709 271.0
BYD3_k127_4106070_48 Catalyzes the sequential removal of 2 amino-terminal arginines from alkaline phosphatase isozyme 1 to form isozymes 2 and 3 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005616 271.0
BYD3_k127_4106070_49 exo-alpha-(2->6)-sialidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002281 260.0
BYD3_k127_4106070_5 Belongs to the ClpA ClpB family K03696 - - 1.787e-289 906.0
BYD3_k127_4106070_50 double-stranded DNA 3'-5' exodeoxyribonuclease activity K01142 - 3.1.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000003891 251.0
BYD3_k127_4106070_51 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.00000000000000000000000000000000000000000000000000000000000000000001002 245.0
BYD3_k127_4106070_52 Catalyzes the oxidation of either pyridoxine 5'- phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP) K00275 - 1.4.3.5 0.000000000000000000000000000000000000000000000000000000000000000001112 236.0
BYD3_k127_4106070_53 - - - - 0.00000000000000000000000000000000000000000000000000000000000000003925 239.0
BYD3_k127_4106070_54 Two component transcriptional regulator, winged helix family K02483 - - 0.000000000000000000000000000000000000000000000000000000000000009041 222.0
BYD3_k127_4106070_55 response - - - 0.00000000000000000000000000000000000000000000000000000000000001071 228.0
BYD3_k127_4106070_56 Protein of unknown function (DUF1499) - - - 0.00000000000000000000000000000000000000000000000000000000004373 213.0
BYD3_k127_4106070_57 [2Fe-2S] binding domain K07302 - 1.3.99.16 0.0000000000000000000000000000000000000000000000000000003078 200.0
BYD3_k127_4106070_58 Ferredoxin K04755 - - 0.00000000000000000000000000000000000000000000000002366 181.0
BYD3_k127_4106070_59 Polysaccharide lyase family 4, domain II - - - 0.0000000000000000000000000000000000000000000000006481 186.0
BYD3_k127_4106070_6 ABC transporter transmembrane region K11085 - - 3.26e-265 830.0
BYD3_k127_4106070_60 Protein of unknown function, DUF - - - 0.00000000000000000000000000000000000000000006339 164.0
BYD3_k127_4106070_61 ApaG domain K06195 - - 0.00000000000000000000000000000000000000002726 158.0
BYD3_k127_4106070_62 Pfam Secreted repeat of - - - 0.0000000000000000000000000000000000001334 146.0
BYD3_k127_4106070_63 Peptidase MA superfamily - - - 0.0000000000000000000000000000000000005535 156.0
BYD3_k127_4106070_65 DinB family - - - 0.00000000000000000000000000000000004362 139.0
BYD3_k127_4106070_66 dUTP diphosphatase activity K01520,K13038 GO:0000287,GO:0003674,GO:0003824,GO:0004170,GO:0005488,GO:0006139,GO:0006220,GO:0006221,GO:0006226,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009141,GO:0009143,GO:0009147,GO:0009149,GO:0009157,GO:0009162,GO:0009165,GO:0009166,GO:0009176,GO:0009177,GO:0009200,GO:0009204,GO:0009211,GO:0009213,GO:0009219,GO:0009221,GO:0009223,GO:0009262,GO:0009263,GO:0009264,GO:0009265,GO:0009394,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0022607,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0043167,GO:0043169,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046078,GO:0046080,GO:0046081,GO:0046385,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0046872,GO:0047429,GO:0051259,GO:0051260,GO:0055086,GO:0065003,GO:0070206,GO:0070207,GO:0071704,GO:0071840,GO:0072527,GO:0072528,GO:0072529,GO:0090407,GO:1901135,GO:1901136,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 3.6.1.23,4.1.1.36,6.3.2.5 0.0000000000000000000000000000000004892 138.0
BYD3_k127_4106070_67 Cytochrome C' - - - 0.000000000000000000000000000003256 126.0
BYD3_k127_4106070_68 acyl-coa hydrolase K10806 - - 0.00000000000000000000000000000567 123.0
BYD3_k127_4106070_69 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation K06891 GO:0003674,GO:0005488,GO:0005515,GO:0006950,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0050896,GO:0051087 - 0.0000000000000000000000000001726 117.0
BYD3_k127_4106070_7 GTP-binding protein TypA K06207 - - 3.271e-263 829.0
BYD3_k127_4106070_70 Antibiotic biosynthesis monooxygenase - - - 0.00000000000000000000000002886 117.0
BYD3_k127_4106070_71 4Fe-4S dicluster domain K05524 - - 0.0000000000000000000000001359 115.0
BYD3_k127_4106070_72 Glycosyl hydrolase family 57 K22278 - 3.5.1.104 0.000000000000000000000005251 110.0
BYD3_k127_4106070_73 PFAM outer membrane efflux protein - - - 0.0000000000000000000000646 113.0
BYD3_k127_4106070_74 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 - - 0.0000000000000000000003027 103.0
BYD3_k127_4106070_75 Putative regulatory protein - - - 0.00000000000000000003473 93.0
BYD3_k127_4106070_76 PFAM RNP-1 like RNA-binding protein - - - 0.00000000000000000005823 98.0
BYD3_k127_4106070_77 membrane transporter protein K07090 - - 0.000000000000000003322 93.0
BYD3_k127_4106070_78 PAP2 superfamily - - - 0.000000000000000003405 94.0
BYD3_k127_4106070_79 kinase activity K01006,K01007,K22424 - 2.7.3.13,2.7.9.1,2.7.9.2 0.00000000000000001568 91.0
BYD3_k127_4106070_8 COG0488 ATPase components of ABC transporters with duplicated ATPase domains K15738 - - 1.032e-258 807.0
BYD3_k127_4106070_80 - - - - 0.00000000000000004394 92.0
BYD3_k127_4106070_81 Metallo-beta-lactamase superfamily - - - 0.0000000000000001733 88.0
BYD3_k127_4106070_82 bacterial OsmY and nodulation domain K04065 GO:0005575,GO:0005623,GO:0006457,GO:0006950,GO:0006970,GO:0006972,GO:0008150,GO:0009628,GO:0009987,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0044464,GO:0050896,GO:0061077 - 0.000000000000004491 85.0
BYD3_k127_4106070_83 - - - - 0.000000000000007592 86.0
BYD3_k127_4106070_84 PFAM response regulator receiver K02658 - - 0.00000000000003236 77.0
BYD3_k127_4106070_85 Lysylphosphatidylglycerol synthase TM region - - - 0.000000000002451 78.0
BYD3_k127_4106070_86 Protein of unknown function (DUF3592) - - - 0.0000000004471 67.0
BYD3_k127_4106070_87 - - - - 0.0000000005973 66.0
BYD3_k127_4106070_88 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798 - - 0.00000000506 63.0
BYD3_k127_4106070_89 - - - - 0.00003883 50.0
BYD3_k127_4106070_9 WD40-like Beta Propeller Repeat - - - 3.295e-238 771.0
BYD3_k127_4106070_90 Protein of unknown function (DUF1653) - - - 0.0001997 51.0
BYD3_k127_4106070_91 - - - - 0.0004736 51.0
BYD3_k127_4107591_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 0.0 1189.0
BYD3_k127_4107591_1 C-terminal domain of 1-Cys peroxiredoxin K03386 - 1.11.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003824 411.0
BYD3_k127_4107591_10 helix_turn_helix multiple antibiotic resistance protein - - - 0.00000000000000000000000000000000000004913 149.0
BYD3_k127_4107591_11 Outer membrane efflux protein K15725 - - 0.000000000000000000000000000000000001115 154.0
BYD3_k127_4107591_12 Polymer-forming cytoskeletal - - - 0.00000000000000000000000000007302 124.0
BYD3_k127_4107591_14 - - - - 0.0000000000000000000001738 104.0
BYD3_k127_4107591_15 - - - - 0.00000000000000000000114 100.0
BYD3_k127_4107591_16 Glycosyl hydrolase family 65, C-terminal domain K01087,K01194 GO:0003674,GO:0003824,GO:0005575,GO:0005576,GO:0005618,GO:0005623,GO:0005886,GO:0016020,GO:0016787,GO:0030312,GO:0044464,GO:0071944 3.1.3.12,3.2.1.28 0.000000000000000000003143 103.0
BYD3_k127_4107591_17 - - - - 0.00000000000000000121 93.0
BYD3_k127_4107591_18 Belongs to the peptidase S1C family K04691,K04771,K04772 - 3.4.21.107 0.000000000000003458 89.0
BYD3_k127_4107591_19 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains - - - 0.0000000000001275 76.0
BYD3_k127_4107591_2 HupE / UreJ protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003764 289.0
BYD3_k127_4107591_20 Cytochrome C' - - - 0.000000000000256 77.0
BYD3_k127_4107591_21 - - - - 0.00000001109 64.0
BYD3_k127_4107591_22 - - - - 0.0000005968 56.0
BYD3_k127_4107591_23 invasion protein IagB - - - 0.00009557 54.0
BYD3_k127_4107591_24 - - - - 0.0005679 45.0
BYD3_k127_4107591_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007253 286.0
BYD3_k127_4107591_4 Transglycosylase SLT domain K08305 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001139 278.0
BYD3_k127_4107591_5 Mechanosensitive ion channel - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000082 277.0
BYD3_k127_4107591_6 Sodium/hydrogen exchanger family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003391 253.0
BYD3_k127_4107591_7 mannose-ethanolamine phosphotransferase activity - - - 0.000000000000000000000000000000000000000000000009832 187.0
BYD3_k127_4107591_8 - - - - 0.0000000000000000000000000000000000000000000001379 175.0
BYD3_k127_4107591_9 glycosyl transferase family K00697,K16055 - 2.4.1.15,2.4.1.347,3.1.3.12 0.0000000000000000000000000000000000000005115 151.0
BYD3_k127_4116581_0 DNA ligase D, 3'-phosphoesterase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002145 269.0
BYD3_k127_4116581_1 FtsZ-dependent cytokinesis - - - 0.0000000000000000000000000000000000000000000000000000000000001482 227.0
BYD3_k127_4116581_2 Di-haem oxidoreductase, putative peroxidase - - - 0.0000000000000000000000000000000000000000000000000004186 192.0
BYD3_k127_4116581_3 cytochrome c oxidase subunit II K02275 - 1.9.3.1 0.0000000000002517 74.0
BYD3_k127_4116581_4 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.00000008472 55.0
BYD3_k127_4130413_0 Belongs to the DNA polymerase type-C family. DnaE2 subfamily K14162 - 2.7.7.7 0.0 1194.0
BYD3_k127_4130413_1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1103.0
BYD3_k127_4130413_10 COG1012 NAD-dependent aldehyde - - - 6.835e-196 627.0
BYD3_k127_4130413_101 Surface antigen - - - 0.00000000000000000000000000000001817 141.0
BYD3_k127_4130413_102 - - - - 0.00000000000000000000000000000003265 138.0
BYD3_k127_4130413_103 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000000000000000000000003473 132.0
BYD3_k127_4130413_104 redox protein regulator of disulfide bond formation - - - 0.00000000000000000000000000000005361 130.0
BYD3_k127_4130413_105 - - - - 0.00000000000000000000000000000009172 137.0
BYD3_k127_4130413_106 Hsp20/alpha crystallin family K13993 - - 0.000000000000000000000000005161 114.0
BYD3_k127_4130413_107 Oxidoreductase - - - 0.00000000000000000000000001572 121.0
BYD3_k127_4130413_108 Gram-negative bacterial TonB protein C-terminal K03832 - - 0.00000000000000000000000001628 121.0
BYD3_k127_4130413_109 PFAM nuclear protein SET K07117 - - 0.0000000000000000000000005683 110.0
BYD3_k127_4130413_11 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 2.003e-195 642.0
BYD3_k127_4130413_110 - - - - 0.000000000000000000000002351 109.0
BYD3_k127_4130413_111 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000000000000000000008376 110.0
BYD3_k127_4130413_112 cheY-homologous receiver domain - - - 0.00000000000000000000001114 104.0
BYD3_k127_4130413_113 Universal stress protein family - - - 0.00000000000000000000001572 108.0
BYD3_k127_4130413_114 response regulator - - - 0.0000000000000000000001324 111.0
BYD3_k127_4130413_115 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000000000000001597 105.0
BYD3_k127_4130413_116 Thioesterase superfamily K01075,K07107 - 3.1.2.23 0.0000000000000000000002115 103.0
BYD3_k127_4130413_117 - - - - 0.000000000000000000000346 106.0
BYD3_k127_4130413_118 Domain of unknown function (DUF4389) - - - 0.000000000000000000000396 106.0
BYD3_k127_4130413_119 PFAM SNARE associated Golgi protein - - - 0.000000000000000000001248 102.0
BYD3_k127_4130413_12 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003958 632.0
BYD3_k127_4130413_120 Acid phosphatase homologues - - - 0.00000000000000000006682 101.0
BYD3_k127_4130413_121 Domain of unknown function (DUF4136) - - - 0.000000000000000004843 92.0
BYD3_k127_4130413_122 - - - - 0.00000000000000002073 93.0
BYD3_k127_4130413_123 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00000000000000005972 95.0
BYD3_k127_4130413_124 Domain of unknown function (DUF4136) - - - 0.00000000000000009618 87.0
BYD3_k127_4130413_125 Pfam:N_methyl_2 - - - 0.0000000000000006601 84.0
BYD3_k127_4130413_126 Belongs to the 'phage' integrase family - - - 0.000000000000002084 86.0
BYD3_k127_4130413_127 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0008152,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0031668,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071496,GO:0071704,GO:0090304,GO:1901360 - 0.00000000000001727 83.0
BYD3_k127_4130413_128 Phage integrase family - - - 0.00000000000003872 76.0
BYD3_k127_4130413_129 - - - - 0.00000000000004335 82.0
BYD3_k127_4130413_13 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005499 608.0
BYD3_k127_4130413_130 BON domain - - - 0.000000000000126 80.0
BYD3_k127_4130413_131 Domain of unknown function (DUF4956) - - - 0.000000000006578 74.0
BYD3_k127_4130413_132 Cytochrome c K00413 - - 0.000000000007887 73.0
BYD3_k127_4130413_133 Surface antigen - - - 0.00000000005729 75.0
BYD3_k127_4130413_134 Cupin domain - - - 0.0000000002063 67.0
BYD3_k127_4130413_135 COG0346 Lactoylglutathione lyase and related lyases - - - 0.0000000003129 67.0
BYD3_k127_4130413_136 - - - - 0.00000000132 66.0
BYD3_k127_4130413_137 - - - - 0.000000008143 64.0
BYD3_k127_4130413_138 Belongs to the 'phage' integrase family - - - 0.00000002417 62.0
BYD3_k127_4130413_139 COG1960 Acyl-CoA dehydrogenases K18244 - - 0.00000006433 64.0
BYD3_k127_4130413_14 COG0471 Di- and tricarboxylate transporters K03319,K09477,K11106,K14445 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005404 565.0
BYD3_k127_4130413_140 Cytochrome C' - - - 0.00000009592 61.0
BYD3_k127_4130413_141 PFAM UspA domain protein - - - 0.0000002472 63.0
BYD3_k127_4130413_142 PHP domain protein K07053 - 3.1.3.97 0.0000008977 53.0
BYD3_k127_4130413_143 Protein of unknown function (DUF3311) - - - 0.000002332 52.0
BYD3_k127_4130413_144 Protein of unknown function (DUF3891) - - - 0.000002546 58.0
BYD3_k127_4130413_145 - - - - 0.000006539 57.0
BYD3_k127_4130413_146 Helix-turn-helix XRE-family like proteins - - - 0.0000314 48.0
BYD3_k127_4130413_147 Cytochrome c - - - 0.0004547 51.0
BYD3_k127_4130413_15 GMC oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003068 563.0
BYD3_k127_4130413_16 pyrroloquinoline quinone binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001595 563.0
BYD3_k127_4130413_17 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002536 554.0
BYD3_k127_4130413_18 Sugar (and other) transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008883 538.0
BYD3_k127_4130413_19 COG0635 Coproporphyrinogen III oxidase and related Fe-S - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001677 512.0
BYD3_k127_4130413_2 Spermine/spermidine synthase domain - - - 3.759e-270 854.0
BYD3_k127_4130413_20 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008627 496.0
BYD3_k127_4130413_21 PQQ-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001999 492.0
BYD3_k127_4130413_22 Domains REC, sigma54 interaction, HTH8 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000637 481.0
BYD3_k127_4130413_23 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001622 475.0
BYD3_k127_4130413_24 protein kinase related protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001497 491.0
BYD3_k127_4130413_25 Tryptophanyl-tRNA synthetase K01867 - 6.1.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004144 463.0
BYD3_k127_4130413_26 Domains REC, sigma54 interaction, HTH8 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000956 464.0
BYD3_k127_4130413_27 Belongs to the alpha-IPM synthase homocitrate synthase family K01649 - 2.3.3.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002362 450.0
BYD3_k127_4130413_28 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000131 437.0
BYD3_k127_4130413_29 4Fe-4S single cluster domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008132 424.0
BYD3_k127_4130413_3 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0016465,GO:0032991,GO:0044183,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051082,GO:0061077,GO:0101031,GO:1990220 - 1.632e-235 739.0
BYD3_k127_4130413_30 Cytochrome b(N-terminal)/b6/petB K00410,K00412,K02635,K02637 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003551 413.0
BYD3_k127_4130413_31 COG1541 Coenzyme F390 synthetase K01912 - 6.2.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004158 413.0
BYD3_k127_4130413_32 ATP:ADP antiporter activity K01932,K03301 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006107 424.0
BYD3_k127_4130413_33 beta-propeller repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001235 411.0
BYD3_k127_4130413_34 Sodium/hydrogen exchanger family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004524 407.0
BYD3_k127_4130413_35 Phosphate transporter family K03306 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001268 392.0
BYD3_k127_4130413_36 ROK family K00847 - 2.7.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001441 385.0
BYD3_k127_4130413_37 NapC/NirT cytochrome c family, N-terminal region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003291 389.0
BYD3_k127_4130413_38 Protein kinase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004724 391.0
BYD3_k127_4130413_39 Bacterial protein of unknown function (DUF839) K07093 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004429 386.0
BYD3_k127_4130413_4 FtsX-like permease family K02004 - - 3.82e-232 744.0
BYD3_k127_4130413_40 Iron-containing alcohol dehydrogenase K00001,K13954 - 1.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003908 377.0
BYD3_k127_4130413_41 Transmembrane secretion effector - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006916 375.0
BYD3_k127_4130413_42 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001868 375.0
BYD3_k127_4130413_43 PFAM Glycosyl transferase, group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000398 348.0
BYD3_k127_4130413_44 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001398 340.0
BYD3_k127_4130413_45 ATP ADP translocase K03301 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008647 340.0
BYD3_k127_4130413_46 (ABC) transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001473 330.0
BYD3_k127_4130413_47 Catalyzes the conversion of dihydroorotate to orotate K00226 - 1.3.98.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003136 331.0
BYD3_k127_4130413_48 Alpha/beta hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007525 323.0
BYD3_k127_4130413_49 Phosphate sensor histidine kinase, HAMP and PAS domain-containing K07636 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006002 327.0
BYD3_k127_4130413_5 phosphatase activity - - - 5.807e-214 679.0
BYD3_k127_4130413_50 Efflux transporter, RND family, MFP subunit K02005 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003474 316.0
BYD3_k127_4130413_51 Methyladenine glycosylase K01246 - 3.2.2.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007029 301.0
BYD3_k127_4130413_52 Evidence 2a Function of homologous gene experimentally demonstrated in an other organism K04771 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005575,GO:0005623,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0016787,GO:0017171,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043170,GO:0044238,GO:0044464,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001191 308.0
BYD3_k127_4130413_53 Domain of unknown function (DUF4010) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004995 296.0
BYD3_k127_4130413_54 protein kinase related protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001307 296.0
BYD3_k127_4130413_55 PAS fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001869 289.0
BYD3_k127_4130413_56 PLD-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005762 285.0
BYD3_k127_4130413_57 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003253 278.0
BYD3_k127_4130413_58 Doubled CXXCH motif (Paired_CXXCH_1) K08354 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002729 278.0
BYD3_k127_4130413_59 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008062 287.0
BYD3_k127_4130413_6 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 1.208e-212 669.0
BYD3_k127_4130413_60 Amidinotransferase K01482 - 3.5.3.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001251 277.0
BYD3_k127_4130413_61 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K03307 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002152 282.0
BYD3_k127_4130413_62 ZIP Zinc transporter K07238 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006891 269.0
BYD3_k127_4130413_63 Transcriptional regulator, LysR - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001011 266.0
BYD3_k127_4130413_64 Cytochrome c554 and c-prime K03620 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001652 270.0
BYD3_k127_4130413_65 Uracil DNA glycosylase superfamily K21929 - 3.2.2.27 0.000000000000000000000000000000000000000000000000000000000000000000000000005633 258.0
BYD3_k127_4130413_66 Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner K02003,K09810 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004316 259.0
BYD3_k127_4130413_67 Belongs to the pseudouridine synthase RsuA family K06178,K06183 - 5.4.99.19,5.4.99.22 0.0000000000000000000000000000000000000000000000000000000000000000000000005462 254.0
BYD3_k127_4130413_68 PFAM Uncharacterised ACR, YagE family COG1723 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000007224 258.0
BYD3_k127_4130413_69 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K14161 - - 0.000000000000000000000000000000000000000000000000000000000000000000001818 252.0
BYD3_k127_4130413_7 Ribosomal protein S1 K02945 - - 6.932e-209 666.0
BYD3_k127_4130413_70 L,D-transpeptidase catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000003703 233.0
BYD3_k127_4130413_71 Thymidine kinase K00857 - 2.7.1.21 0.000000000000000000000000000000000000000000000000000000000000000007138 243.0
BYD3_k127_4130413_72 response regulator K07657 - - 0.00000000000000000000000000000000000000000000000000000000000000003346 230.0
BYD3_k127_4130413_73 Histidine kinase-like ATPases - - - 0.0000000000000000000000000000000000000000000000000000000000000002533 248.0
BYD3_k127_4130413_74 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.00000000000000000000000000000000000000000000000000000000000001101 221.0
BYD3_k127_4130413_75 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.00000000000000000000000000000000000000000000000000000000000001469 224.0
BYD3_k127_4130413_76 Putative outer membrane beta-barrel porin, MtrB/PioB - - - 0.00000000000000000000000000000000000000000000000000000000000001756 240.0
BYD3_k127_4130413_77 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 - - 0.0000000000000000000000000000000000000000000000000000000000005381 215.0
BYD3_k127_4130413_78 Redoxin K03564 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000003803 199.0
BYD3_k127_4130413_79 PFAM response regulator receiver K02483,K07658,K07668 - - 0.000000000000000000000000000000000000000000000000000004984 198.0
BYD3_k127_4130413_8 COG0644 Dehydrogenases (flavoproteins) - - - 1.15e-205 647.0
BYD3_k127_4130413_80 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.00000000000000000000000000000000000000000000000000001628 200.0
BYD3_k127_4130413_81 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 - 2.7.4.25 0.00000000000000000000000000000000000000000000000000005035 195.0
BYD3_k127_4130413_82 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.0000000000000000000000000000000000000000000000000003404 190.0
BYD3_k127_4130413_83 Protein of unknown function DUF47 K07220 - - 0.000000000000000000000000000000000000000000000000001077 189.0
BYD3_k127_4130413_84 PFAM histidine triad (HIT) protein K19710 - 2.7.7.53 0.000000000000000000000000000000000000000000000000001379 189.0
BYD3_k127_4130413_85 BON domain - - - 0.00000000000000000000000000000000000000000000000006452 188.0
BYD3_k127_4130413_86 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995 - 2.7.8.5 0.0000000000000000000000000000000000000000000000001266 186.0
BYD3_k127_4130413_87 Peptidase M50 - - - 0.0000000000000000000000000000000000000000000003664 173.0
BYD3_k127_4130413_88 Belongs to the DNA glycosylase MPG family K03652 - 3.2.2.21 0.000000000000000000000000000000000000000000000592 175.0
BYD3_k127_4130413_89 glyoxalase III activity K01259 - 3.4.11.5 0.000000000000000000000000000000000000000000003038 177.0
BYD3_k127_4130413_9 FtsX-like permease family - - - 6.172e-198 657.0
BYD3_k127_4130413_90 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 GO:0003674,GO:0005488,GO:0005515,GO:0042802 - 0.00000000000000000000000000000000000000000001526 169.0
BYD3_k127_4130413_91 Stage II sporulation protein K06381 - - 0.00000000000000000000000000000000000000000002742 179.0
BYD3_k127_4130413_92 Rieske [2Fe-2S] domain K00411,K02636,K03886 - 1.10.2.2,1.10.9.1 0.000000000000000000000000000000000000000000168 168.0
BYD3_k127_4130413_93 Bacterial extracellular solute-binding protein K02020,K22003 - 5.3.3.7 0.0000000000000000000000000000000000000000004125 168.0
BYD3_k127_4130413_94 COG0589 Universal stress protein UspA and related nucleotide-binding proteins - - - 0.00000000000000000000000000000000000000005693 164.0
BYD3_k127_4130413_95 cheY-homologous receiver domain - - - 0.000000000000000000000000000000000000001575 151.0
BYD3_k127_4130413_96 VIT family - - - 0.00000000000000000000000000000000000007304 151.0
BYD3_k127_4130413_97 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K05788 - - 0.000000000000000000000000000000000004245 139.0
BYD3_k127_4130413_98 - - - - 0.00000000000000000000000000000000009286 139.0
BYD3_k127_4130413_99 Belongs to the universal stress protein A family - - - 0.0000000000000000000000000000000002024 144.0
BYD3_k127_4138067_0 C-terminus of AA_permease K03294 - - 1.78e-233 737.0
BYD3_k127_4138067_1 Carboxypeptidase regulatory-like domain - - - 1.777e-203 673.0
BYD3_k127_4138067_10 Belongs to the low molecular weight phosphotyrosine protein phosphatase family K03741 - 1.20.4.1 0.0000000000000000000000000000000000000000000000001319 190.0
BYD3_k127_4138067_11 Beta-lactamase - - - 0.000000000000000000000000000000000000000001502 164.0
BYD3_k127_4138067_12 Beta-lactamase superfamily domain K17837 - 3.5.2.6 0.00000000000000000000000000000000000000008299 166.0
BYD3_k127_4138067_13 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.00000000000000000000000000000000000004 147.0
BYD3_k127_4138067_14 Domain of unknown function (DUF309) K09763 - - 0.00000000000000000000000000000000002246 138.0
BYD3_k127_4138067_15 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000006356 141.0
BYD3_k127_4138067_16 PFAM peptidase C60, sortase A and B K07284 - 3.4.22.70 0.000000000000000000000000000000001559 137.0
BYD3_k127_4138067_17 Belongs to the acetyltransferase family. ArgA subfamily K00619 - 2.3.1.1 0.000000000000000000000000000000002383 133.0
BYD3_k127_4138067_18 Pyridoxamine 5'-phosphate oxidase like - - - 0.0000000000000000000000000000006386 126.0
BYD3_k127_4138067_19 PFAM RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) - - - 0.000000000000000000000000005843 112.0
BYD3_k127_4138067_2 helicase superfamily c-terminal domain K11927 - 3.6.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008058 524.0
BYD3_k127_4138067_20 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 - - 0.00000000000000000000000003116 110.0
BYD3_k127_4138067_21 DoxX K15977 - - 0.0000000000000000000000002135 116.0
BYD3_k127_4138067_22 - - - - 0.000000000000000000000001042 115.0
BYD3_k127_4138067_23 PFAM regulatory protein ArsR K03892 - - 0.0000000000000000000001725 102.0
BYD3_k127_4138067_24 Phosphatidylethanolamine-binding protein - - - 0.00000000000000000000203 105.0
BYD3_k127_4138067_25 Protein of unknown function (DUF1722) - - - 0.000000000000000000009283 93.0
BYD3_k127_4138067_26 Beta-lactamase - - - 0.0000000000000000005084 91.0
BYD3_k127_4138067_27 - - - - 0.00000000000000005834 91.0
BYD3_k127_4138067_28 TCP-1/cpn60 chaperonin family K04077 GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006259,GO:0006457,GO:0006458,GO:0006725,GO:0006807,GO:0006950,GO:0007154,GO:0008150,GO:0008152,GO:0009266,GO:0009295,GO:0009408,GO:0009605,GO:0009628,GO:0009987,GO:0009991,GO:0016020,GO:0016043,GO:0016465,GO:0030312,GO:0031668,GO:0032991,GO:0033554,GO:0034641,GO:0040007,GO:0042026,GO:0042262,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043388,GO:0043590,GO:0044093,GO:0044183,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046483,GO:0050896,GO:0051082,GO:0051098,GO:0051099,GO:0051101,GO:0051716,GO:0061077,GO:0065007,GO:0065009,GO:0071496,GO:0071704,GO:0071840,GO:0071944,GO:0090143,GO:0090304,GO:0097159,GO:0101031,GO:1901360,GO:1901363,GO:1990220,GO:2000677,GO:2000679 - 0.000000000000001004 77.0
BYD3_k127_4138067_29 - - - - 0.000000000000001719 81.0
BYD3_k127_4138067_3 Hypothetical methyltransferase K07755 - 2.1.1.137 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001634 375.0
BYD3_k127_4138067_30 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.000000000000009321 76.0
BYD3_k127_4138067_31 - - - - 0.00000000000001423 84.0
BYD3_k127_4138067_32 - - - - 0.00000000000004108 79.0
BYD3_k127_4138067_33 - - - - 0.00000000000009177 83.0
BYD3_k127_4138067_34 - - - - 0.0000000000001046 81.0
BYD3_k127_4138067_35 - - - - 0.0000000000002819 74.0
BYD3_k127_4138067_36 Cytochrome c - - - 0.000000000004898 78.0
BYD3_k127_4138067_37 - - - - 0.000000000006238 76.0
BYD3_k127_4138067_38 - - - - 0.00000003441 62.0
BYD3_k127_4138067_39 Formiminotransferase-cyclodeaminase - - - 0.0000002692 60.0
BYD3_k127_4138067_4 Belongs to the MIP aquaporin (TC 1.A.8) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006178 332.0
BYD3_k127_4138067_40 - - - - 0.0000266 55.0
BYD3_k127_4138067_41 arylformamidase activity - - - 0.0004929 49.0
BYD3_k127_4138067_5 Sigma factor PP2C-like phosphatases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007056 324.0
BYD3_k127_4138067_6 PFAM SMP-30 Gluconolaconase LRE-like region K01053 - 3.1.1.17 0.00000000000000000000000000000000000000000000000000000000000000000001156 250.0
BYD3_k127_4138067_7 cAMP biosynthetic process K18672 - 2.7.7.85 0.000000000000000000000000000000000000000000000000000000001805 206.0
BYD3_k127_4138067_8 Peptidase, M16 K07263 - - 0.0000000000000000000000000000000000000000000000000001741 200.0
BYD3_k127_4138067_9 PFAM von Willebrand factor type A K07114,K12511 - - 0.00000000000000000000000000000000000000000000000008 186.0
BYD3_k127_4198133_0 PFAM asparagine synthase K01953 - 6.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000745 537.0
BYD3_k127_4198133_1 Heparinase II/III N-terminus - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004908 312.0
BYD3_k127_4198133_10 Protein involved in cellulose biosynthesis - - - 0.0000000000000000000000000000000000000003428 166.0
BYD3_k127_4198133_12 GDSL-like Lipase/Acylhydrolase family - - - 0.000002842 56.0
BYD3_k127_4198133_2 PFAM Glycosyl transferase, group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003622 292.0
BYD3_k127_4198133_3 COG0223 Methionyl-tRNA formyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001458 282.0
BYD3_k127_4198133_4 glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004347 285.0
BYD3_k127_4198133_5 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001794 257.0
BYD3_k127_4198133_6 Polysaccharide biosynthesis protein - - - 0.00000000000000000000000000000000000000000000000000000000000003447 233.0
BYD3_k127_4198133_7 Belongs to the DegT DnrJ EryC1 family - - - 0.00000000000000000000000000000000000000000000000000000000001385 222.0
BYD3_k127_4198133_8 PFAM Polysaccharide deacetylase - - - 0.0000000000000000000000000000000000000000000000000000000002521 213.0
BYD3_k127_4198133_9 Polysaccharide deacetylase - - - 0.0000000000000000000000000000000000000000000699 175.0
BYD3_k127_4228599_0 response regulator K07713 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008357 382.0
BYD3_k127_4228599_1 Lactonase, 7-bladed beta-propeller - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007616 286.0
BYD3_k127_4228599_2 Histidine kinase - - - 0.0000000000000000000000000000501 134.0
BYD3_k127_4228599_3 NAD(P)H-binding - - - 0.000000003018 58.0
BYD3_k127_4231045_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 1.312e-282 904.0
BYD3_k127_4231045_1 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 5.716e-261 812.0
BYD3_k127_4231045_10 Bacterial regulatory protein, Fis family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002253 341.0
BYD3_k127_4231045_11 Metallo-beta-lactamase superfamily K17837 - 3.5.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000009809 296.0
BYD3_k127_4231045_12 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008272 273.0
BYD3_k127_4231045_13 PFAM MOFRL domain protein K11529 - 2.7.1.165 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005934 281.0
BYD3_k127_4231045_14 Glucose / Sorbosone dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006523 276.0
BYD3_k127_4231045_15 Outer membrane efflux protein K12340 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004113 273.0
BYD3_k127_4231045_16 Cell division ATP-binding protein ftsE K09811,K09812 GO:0000166,GO:0000287,GO:0000910,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0007049,GO:0008144,GO:0008150,GO:0008356,GO:0009898,GO:0009966,GO:0009987,GO:0010646,GO:0016020,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019897,GO:0019898,GO:0022402,GO:0022603,GO:0022607,GO:0023051,GO:0030145,GO:0030554,GO:0031234,GO:0032153,GO:0032506,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042173,GO:0042221,GO:0043167,GO:0043168,GO:0043169,GO:0043937,GO:0043938,GO:0044085,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0045595,GO:0045597,GO:0045881,GO:0046677,GO:0046872,GO:0046914,GO:0048518,GO:0048522,GO:0048583,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051094,GO:0051301,GO:0065007,GO:0070297,GO:0071840,GO:0071944,GO:0090529,GO:0097159,GO:0097367,GO:0098552,GO:0098562,GO:1901265,GO:1901363,GO:1902531 - 0.000000000000000000000000000000000000000000000000000000000000000000000005723 249.0
BYD3_k127_4231045_17 - - - - 0.000000000000000000000000000000000000000000000000000000000000000008921 233.0
BYD3_k127_4231045_18 Belongs to the SAICAR synthetase family K01923 - 6.3.2.6 0.000000000000000000000000000000000000000000000000000005311 193.0
BYD3_k127_4231045_19 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.00000000000000000000000000000000000000000000000000002593 205.0
BYD3_k127_4231045_2 PFAM Peptidase M1, membrane alanine aminopeptidase K01256,K08776 - 3.4.11.2 1.158e-232 747.0
BYD3_k127_4231045_20 lipolytic protein G-D-S-L family K10804 GO:0003674,GO:0003824,GO:0004620,GO:0004622,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0016289,GO:0016290,GO:0016298,GO:0016787,GO:0016788,GO:0016790,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0042802,GO:0043170,GO:0044238,GO:0044464,GO:0047617,GO:0052689,GO:0071704,GO:0140096,GO:1901564 3.1.1.5 0.00000000000000000000000000000000000000000000000000003186 201.0
BYD3_k127_4231045_21 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000000000000003918 160.0
BYD3_k127_4231045_22 Belongs to the ABC-4 integral membrane protein family. FtsX subfamily K09811,K09812 GO:0000910,GO:0005575,GO:0005576,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0006928,GO:0007049,GO:0007154,GO:0007165,GO:0007166,GO:0008150,GO:0008356,GO:0009274,GO:0009276,GO:0009605,GO:0009607,GO:0009615,GO:0009966,GO:0009987,GO:0010033,GO:0010646,GO:0016020,GO:0016021,GO:0016043,GO:0019221,GO:0022402,GO:0022603,GO:0022607,GO:0023051,GO:0023052,GO:0030312,GO:0030313,GO:0031224,GO:0031226,GO:0031975,GO:0032153,GO:0032506,GO:0034097,GO:0040007,GO:0040011,GO:0042173,GO:0042221,GO:0043207,GO:0043937,GO:0043938,GO:0044085,GO:0044425,GO:0044459,GO:0044464,GO:0045595,GO:0045597,GO:0045881,GO:0048518,GO:0048522,GO:0048583,GO:0048870,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051094,GO:0051179,GO:0051301,GO:0051674,GO:0051704,GO:0051707,GO:0051716,GO:0065007,GO:0070098,GO:0070297,GO:0070887,GO:0071310,GO:0071345,GO:0071840,GO:0071944,GO:0071976,GO:0090529,GO:1902531 - 0.0000000000000000000000000000000000000008931 162.0
BYD3_k127_4231045_23 Uncharacterised protein family UPF0047 - - - 0.000000000000000000000000000000000000009521 151.0
BYD3_k127_4231045_24 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0009987,GO:0010033,GO:0016032,GO:0016465,GO:0019058,GO:0019068,GO:0032991,GO:0035966,GO:0042221,GO:0042802,GO:0043167,GO:0043169,GO:0044403,GO:0044419,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046872,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0051704,GO:0061077,GO:0101031,GO:1990220 - 0.000000000000000000000000000000000002239 141.0
BYD3_k127_4231045_25 PFAM 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK K00950 - 2.7.6.3 0.000000000000000000000000000000000002865 142.0
BYD3_k127_4231045_26 TIGRFAM TonB family protein K03832 - - 0.00000000000000000000000000009719 126.0
BYD3_k127_4231045_27 von Willebrand factor, type A K07114 - - 0.0000000000000000000000001467 118.0
BYD3_k127_4231045_28 Domain of unknown function (DU1801) - - - 0.0000000000000000000000003675 108.0
BYD3_k127_4231045_29 hyperosmotic response - - - 0.00000000000000000009043 99.0
BYD3_k127_4231045_3 Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA K01610 GO:0003674,GO:0003824,GO:0004611,GO:0004612,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006094,GO:0008150,GO:0008152,GO:0009058,GO:0016051,GO:0016829,GO:0016830,GO:0016831,GO:0019318,GO:0019319,GO:0044238,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046364,GO:0071704,GO:1901576 4.1.1.49 1.031e-218 690.0
BYD3_k127_4231045_30 Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters K06204 - - 0.00000000000000005251 85.0
BYD3_k127_4231045_31 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000004759 87.0
BYD3_k127_4231045_32 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.0000000000004959 69.0
BYD3_k127_4231045_33 Heat induced stress protein YflT - - - 0.000000000007606 72.0
BYD3_k127_4231045_34 Bacterial regulatory protein, Fis family - - - 0.00000000001155 73.0
BYD3_k127_4231045_35 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K01759 - 4.4.1.5 0.00000000001545 71.0
BYD3_k127_4231045_36 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000006599 58.0
BYD3_k127_4231045_37 ATP-independent chaperone mediated protein folding - - - 0.00000003709 61.0
BYD3_k127_4231045_38 2OG-Fe(II) oxygenase superfamily K15429 - 2.1.1.228 0.00000007397 64.0
BYD3_k127_4231045_4 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 2.481e-199 645.0
BYD3_k127_4231045_5 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001572 551.0
BYD3_k127_4231045_6 Sigma-54 interaction domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001056 458.0
BYD3_k127_4231045_7 LytB protein K03527 - 1.17.7.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004084 441.0
BYD3_k127_4231045_8 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K13810 - 2.2.1.2,5.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005913 425.0
BYD3_k127_4231045_9 FtsX-like permease family K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003261 429.0
BYD3_k127_455822_0 Diguanylate cyclase - - - 3.663e-213 687.0
BYD3_k127_4578037_0 Beta-lactamase - - - 4.692e-268 842.0
BYD3_k127_4578037_1 Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate K01712 - 4.2.1.49 4.653e-265 826.0
BYD3_k127_4578037_10 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001791 284.0
BYD3_k127_4578037_11 nucleotidyltransferase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000009836 269.0
BYD3_k127_4578037_12 Psort location CytoplasmicMembrane, score 10.00 K03975 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001421 246.0
BYD3_k127_4578037_13 alpha/beta hydrolase fold - - - 0.000000000000000000000000000000000000000000000000000000000002982 218.0
BYD3_k127_4578037_14 - - - - 0.00000000000000000000000000000000000000000000000000000000004155 213.0
BYD3_k127_4578037_15 Stage II sporulation protein E K07315 - 3.1.3.3 0.000000000000000000000000000000000000000000000000000000005748 220.0
BYD3_k127_4578037_16 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 - 3.1.26.3 0.00000000000000000000000000000000000000000000000000000007116 207.0
BYD3_k127_4578037_17 SnoaL-like polyketide cyclase - - - 0.00000000000000000000000000000000000000000000000001081 188.0
BYD3_k127_4578037_18 alpha beta K06889 - - 0.0000000000000000000000000000000000000000000004493 183.0
BYD3_k127_4578037_19 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate - - - 0.0000000000000000000000000000000000000000004392 164.0
BYD3_k127_4578037_2 Aromatic amino acid lyase K01745 - 4.3.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009083 495.0
BYD3_k127_4578037_20 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) - - - 0.000000000000000000000000000000000000000009356 167.0
BYD3_k127_4578037_21 phosphatase activity K07025,K08723 - 3.1.3.5 0.0000000000000000000000000000000000000005825 157.0
BYD3_k127_4578037_22 lactoylglutathione lyase activity - - - 0.00000000000000000000000000000852 124.0
BYD3_k127_4578037_23 protein involved in tolerance to divalent cations K03926 - - 0.000000000000000000004706 104.0
BYD3_k127_4578037_24 Resolvase, N terminal domain - - - 0.0000000000007236 71.0
BYD3_k127_4578037_26 AMP-binding enzyme - - - 0.000000000004296 77.0
BYD3_k127_4578037_27 AAA ATPase domain - - - 0.00000000002505 76.0
BYD3_k127_4578037_28 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000001155 69.0
BYD3_k127_4578037_29 Tfp pilus assembly protein pilus retraction ATPase PilT K02669 - - 0.00000001456 68.0
BYD3_k127_4578037_3 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 - 6.3.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006993 471.0
BYD3_k127_4578037_30 - - - - 0.00000005602 57.0
BYD3_k127_4578037_31 Protein of unknown function (DUF3011) - - - 0.0000001985 64.0
BYD3_k127_4578037_32 Peptidase family M23 K21472 - - 0.000001522 55.0
BYD3_k127_4578037_33 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic K05589,K13052 - - 0.000004589 57.0
BYD3_k127_4578037_34 - - - - 0.00001662 55.0
BYD3_k127_4578037_35 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.00002072 49.0
BYD3_k127_4578037_36 transcriptional regulator, XRE family K07726 - - 0.00006016 52.0
BYD3_k127_4578037_4 Cys Met metabolism K01739,K01758,K01761 - 2.5.1.48,4.4.1.1,4.4.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007096 457.0
BYD3_k127_4578037_5 Protein conserved in bacteria K11891,K11902,K11910 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004058 406.0
BYD3_k127_4578037_6 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009256 347.0
BYD3_k127_4578037_7 ABC transporter K01990,K09695 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005145 303.0
BYD3_k127_4578037_8 deaminase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001706 292.0
BYD3_k127_4578037_9 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001046 283.0
BYD3_k127_4583817_0 secondary active sulfate transmembrane transporter activity K06901 - - 0.00000000000000000000000000001767 119.0
BYD3_k127_4583817_1 - - - - 0.000001378 60.0
BYD3_k127_4583817_2 Domain of unknown function (DUF4349) - - - 0.00003125 52.0
BYD3_k127_4632627_0 Transcriptional regulator - - - 0.000000000000000000000000000000416 133.0
BYD3_k127_4632627_1 Creatinine amidohydrolase K01470 - 3.5.2.10 0.00000009424 62.0
BYD3_k127_4747789_0 1,4-alpha-glucan branching enzyme activity K00700,K01236 GO:0000271,GO:0003674,GO:0003824,GO:0003844,GO:0005975,GO:0005976,GO:0005977,GO:0005978,GO:0006073,GO:0006091,GO:0006112,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009250,GO:0009987,GO:0015980,GO:0016051,GO:0016740,GO:0016757,GO:0016758,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0055114,GO:0071704,GO:1901576 2.4.1.18,3.2.1.141 6.698e-295 931.0
BYD3_k127_4747789_1 arylsulfatase activity K01130 - 3.1.6.1 2.263e-276 856.0
BYD3_k127_4747789_10 Predicted Permease Membrane Region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007985 593.0
BYD3_k127_4747789_11 FAD dependent oxidoreductase K13796 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003947 611.0
BYD3_k127_4747789_12 Cytochrome c - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001077 557.0
BYD3_k127_4747789_13 Asparaginase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001877 512.0
BYD3_k127_4747789_14 regulation of DNA-templated transcription, elongation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006007 533.0
BYD3_k127_4747789_15 serine-type peptidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003834 486.0
BYD3_k127_4747789_16 FAD dependent oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003136 467.0
BYD3_k127_4747789_17 - K07221 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002516 460.0
BYD3_k127_4747789_18 HxlR-like helix-turn-helix - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009744 443.0
BYD3_k127_4747789_19 PFAM Band 7 protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006318 445.0
BYD3_k127_4747789_2 Berberine and berberine like - - - 5.99e-270 838.0
BYD3_k127_4747789_20 PFAM NAD-dependent epimerase dehydratase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003513 438.0
BYD3_k127_4747789_21 AI-2E family transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002158 425.0
BYD3_k127_4747789_22 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001202 401.0
BYD3_k127_4747789_23 lysine biosynthetic process via aminoadipic acid - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002008 393.0
BYD3_k127_4747789_24 CitB domain protein K13795 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001998 374.0
BYD3_k127_4747789_25 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006209 394.0
BYD3_k127_4747789_26 Carbohydrate family 9 binding domain-like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001901 370.0
BYD3_k127_4747789_27 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007359 334.0
BYD3_k127_4747789_28 cellular manganese ion homeostasis - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001174 336.0
BYD3_k127_4747789_29 cytochrome K17230 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006673 324.0
BYD3_k127_4747789_3 Fumarase C C-terminus - - - 3.949e-234 740.0
BYD3_k127_4747789_30 PFAM Tripartite tricarboxylate transporter family receptor K07795 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007564 329.0
BYD3_k127_4747789_31 3-demethylubiquinone-9 3-methyltransferase K00568 - 2.1.1.222,2.1.1.64 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004257 308.0
BYD3_k127_4747789_32 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007284 305.0
BYD3_k127_4747789_33 KR domain K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007992 301.0
BYD3_k127_4747789_34 PFAM Tannase and feruloyl esterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001289 301.0
BYD3_k127_4747789_35 amino acid-binding ACT domain protein K04518 - 4.2.1.51 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006459 280.0
BYD3_k127_4747789_36 ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004035 263.0
BYD3_k127_4747789_37 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 - 2.5.1.129 0.000000000000000000000000000000000000000000000000000000000000000000000000001785 259.0
BYD3_k127_4747789_38 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.00000000000000000000000000000000000000000000000000000000000000000000009271 244.0
BYD3_k127_4747789_39 Rhomboid family - - - 0.000000000000000000000000000000000000000000000000000000000000000000003962 244.0
BYD3_k127_4747789_4 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K14393 - - 7.921e-227 716.0
BYD3_k127_4747789_40 Ribosomal RNA adenine dimethylase K00573 GO:0003674,GO:0003824,GO:0004719,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0010340,GO:0016740,GO:0016741,GO:0019538,GO:0032259,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0051998,GO:0071704,GO:0140096,GO:1901564 2.1.1.77 0.00000000000000000000000000000000000000000000000000000000000000000001534 241.0
BYD3_k127_4747789_41 COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family K03767,K03768 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000006472 234.0
BYD3_k127_4747789_42 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000001595 251.0
BYD3_k127_4747789_43 Metallo-beta-lactamase superfamily K17837 - 3.5.2.6 0.00000000000000000000000000000000000000000000000000000000000000004452 232.0
BYD3_k127_4747789_44 Putative cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000001685 235.0
BYD3_k127_4747789_45 Peptidase family M48 - - - 0.000000000000000000000000000000000000000000000000000000000005554 226.0
BYD3_k127_4747789_46 tRNA rRNA methyltransferase, SpoU - - - 0.000000000000000000000000000000000000000000000000000002258 202.0
BYD3_k127_4747789_47 META domain K03929 - - 0.0000000000000000000000000000000000000000000000000003626 189.0
BYD3_k127_4747789_48 - - - - 0.0000000000000000000000000000000000000000000000002748 194.0
BYD3_k127_4747789_49 pfkB family carbohydrate kinase K18478 - 2.7.1.184 0.000000000000000000000000000000000000000000000001992 186.0
BYD3_k127_4747789_5 His Kinase A (phosphoacceptor) domain - - - 1.297e-218 717.0
BYD3_k127_4747789_50 G/U mismatch-specific uracil-DNA glycosylase activity K01934,K03649 GO:0000700,GO:0003674,GO:0003824,GO:0004844,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006285,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008263,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097506,GO:0140097,GO:1901360 3.2.2.28,6.3.3.2 0.00000000000000000000000000000000000000000005061 166.0
BYD3_k127_4747789_51 lipid kinase activity - - - 0.000000000000000000000000000000000000000002258 175.0
BYD3_k127_4747789_52 Metallo-beta-lactamase superfamily K17837 - 3.5.2.6 0.000000000000000000000000000000000000000003361 169.0
BYD3_k127_4747789_53 EVE domain - - - 0.00000000000000000000000000000000000000003262 155.0
BYD3_k127_4747789_54 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000001015 155.0
BYD3_k127_4747789_55 SMART Extracellular solute-binding protein, family 3 K02030 - - 0.00000000000000000000000000000000000004722 158.0
BYD3_k127_4747789_56 amine dehydrogenase activity - - - 0.000000000000000000000000000000000001706 155.0
BYD3_k127_4747789_57 Protein of Unknown function (DUF2784) - - - 0.00000000000000000000000000000000008749 136.0
BYD3_k127_4747789_58 protein, possibly involved in utilization of glycolate and propanediol K11477 - - 0.000000000000000000000000000000001383 140.0
BYD3_k127_4747789_59 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000001215 146.0
BYD3_k127_4747789_6 lysine biosynthetic process via aminoadipic acid - - - 1.272e-203 669.0
BYD3_k127_4747789_60 Cupin 2, conserved barrel domain protein - - - 0.000000000000000000000000000006295 130.0
BYD3_k127_4747789_61 cellular response to DNA damage stimulus K07340 - - 0.000000000000000000000000001926 117.0
BYD3_k127_4747789_62 Protein of unknown function, DUF485 - - - 0.000000000000000000000000006411 113.0
BYD3_k127_4747789_63 Tripartite tricarboxylate transporter TctB family - - - 0.0000000000000000000007556 101.0
BYD3_k127_4747789_64 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.000000000000000000003182 106.0
BYD3_k127_4747789_66 efflux transmembrane transporter activity K02004 - - 0.0000000000000000001155 99.0
BYD3_k127_4747789_67 - - - - 0.000000000000000001297 96.0
BYD3_k127_4747789_69 Surface antigen - - - 0.00000000000000001036 96.0
BYD3_k127_4747789_7 Tripartite tricarboxylate transporter TctA family K07793 - - 1.239e-200 635.0
BYD3_k127_4747789_70 protein localization to T-tubule K21440 - - 0.00000000000000004894 94.0
BYD3_k127_4747789_71 - - - - 0.000000000000000893 89.0
BYD3_k127_4747789_72 BON domain - - - 0.000000000000001029 86.0
BYD3_k127_4747789_73 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.0000000000000178 84.0
BYD3_k127_4747789_74 Histidine kinase - - - 0.0000000000003792 75.0
BYD3_k127_4747789_75 - - - - 0.000000000001528 78.0
BYD3_k127_4747789_76 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.00000000004359 70.0
BYD3_k127_4747789_77 - - - - 0.00000000004447 69.0
BYD3_k127_4747789_78 TIR domain - - - 0.00000000519 68.0
BYD3_k127_4747789_8 PFAM Tripartite tricarboxylate transporter TctA family K07793 - - 5.255e-197 630.0
BYD3_k127_4747789_80 TonB-dependent Receptor Plug - - - 0.00000001622 66.0
BYD3_k127_4747789_81 - - - - 0.00000006571 61.0
BYD3_k127_4747789_82 aminopeptidase N - - - 0.0000004289 61.0
BYD3_k127_4747789_83 response regulator K07720 - - 0.000007172 58.0
BYD3_k127_4747789_84 - - - - 0.00003115 53.0
BYD3_k127_4747789_85 S-adenosyl-L-methionine-dependent methyltransferase - - - 0.00006357 53.0
BYD3_k127_4747789_86 - - - - 0.00008498 53.0
BYD3_k127_4747789_87 - - - - 0.0001153 52.0
BYD3_k127_4747789_88 - - - - 0.0001622 52.0
BYD3_k127_4747789_89 - - - - 0.0001658 50.0
BYD3_k127_4747789_9 MmgE PrpD family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001039 629.0
BYD3_k127_4789723_0 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 - 4.3.1.19 3.475e-251 782.0
BYD3_k127_4789723_1 L-lactate permease K03303 - - 3.701e-247 773.0
BYD3_k127_4789723_10 Belongs to the alpha-IPM synthase homocitrate synthase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005223 422.0
BYD3_k127_4789723_11 Glutathione synthase Ribosomal protein S6 modification enzyme (Glutaminyl transferase) K01919,K01955,K03802 - 6.3.2.2,6.3.2.29,6.3.2.30,6.3.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002718 404.0
BYD3_k127_4789723_12 Receptor family ligand binding region K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000138 362.0
BYD3_k127_4789723_13 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K00058 - 1.1.1.399,1.1.1.95 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001249 347.0
BYD3_k127_4789723_14 Bacterial extracellular solute-binding protein, family 7 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003748 340.0
BYD3_k127_4789723_15 COG1319 Aerobic-type carbon monoxide dehydrogenase middle subunit CoxM CutM homologs K03519 - 1.2.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001793 331.0
BYD3_k127_4789723_16 carboxylic acid catabolic process K01856,K19802 - 5.1.1.20,5.5.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000295 309.0
BYD3_k127_4789723_17 N-acetylglucosaminylinositol deacetylase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001085 299.0
BYD3_k127_4789723_18 PFAM Branched-chain amino acid transport system permease component K01997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003205 279.0
BYD3_k127_4789723_19 iron ion binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004848 269.0
BYD3_k127_4789723_2 Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding K03520 - 1.2.5.3 1.03e-246 792.0
BYD3_k127_4789723_20 PFAM Branched-chain amino acid transport system permease component K01997,K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000009855 263.0
BYD3_k127_4789723_21 aerobic-type carbon monoxide dehydrogenase, small subunit CoxS - - - 0.000000000000000000000000000000000000000000000000000000000000000000000791 244.0
BYD3_k127_4789723_22 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000000007257 244.0
BYD3_k127_4789723_23 ECF sigma factor - - - 0.00000000000000000000000000000000000000000000000000000000000000001145 229.0
BYD3_k127_4789723_24 Zinc-binding dehydrogenase K00008 - 1.1.1.14 0.00000000000000000000000000000000000000000000000000000000000002141 228.0
BYD3_k127_4789723_25 ABC-type branched-chain amino acid transport systems ATPase component K01996 - - 0.00000000000000000000000000000000000000000000000000000000000002344 226.0
BYD3_k127_4789723_26 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K01563,K11991 - 3.5.4.33,3.8.1.5 0.0000000000000000000000000000000000000000000001864 172.0
BYD3_k127_4789723_27 Domain of unknown function (DUF1330) - - - 0.0000000000000000000000000000000000000000000005235 168.0
BYD3_k127_4789723_28 amine dehydrogenase activity - - - 0.00000000000000000000000000000000003874 150.0
BYD3_k127_4789723_29 beta-propeller repeat - - - 0.00000000000000000000000000000005213 141.0
BYD3_k127_4789723_3 Carboxypeptidase regulatory-like domain - - - 2.713e-213 702.0
BYD3_k127_4789723_30 - - - - 0.000000000000000000000000000002461 122.0
BYD3_k127_4789723_31 - - - - 0.000000000000000000000000004349 121.0
BYD3_k127_4789723_32 - - - - 0.00000000000000000000001206 110.0
BYD3_k127_4789723_33 protocatechuate 3,4-dioxygenase activity - - - 0.0000000000000000000006841 104.0
BYD3_k127_4789723_34 - - - - 0.0000000000000000000009239 107.0
BYD3_k127_4789723_35 - - - - 0.000000000000000000001235 99.0
BYD3_k127_4789723_36 - - - - 0.0000000000000000001164 104.0
BYD3_k127_4789723_37 - - - - 0.0000000000000000003114 98.0
BYD3_k127_4789723_38 - - - - 0.00000000000000005496 89.0
BYD3_k127_4789723_39 - - - - 0.000000000000001506 82.0
BYD3_k127_4789723_4 Carboxypeptidase regulatory-like domain - - - 1.386e-210 697.0
BYD3_k127_4789723_40 - - - - 0.0000000002936 66.0
BYD3_k127_4789723_41 Haem-degrading - - - 0.000005127 57.0
BYD3_k127_4789723_43 - - - - 0.00003759 52.0
BYD3_k127_4789723_44 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K07497 - - 0.00007543 51.0
BYD3_k127_4789723_5 Xaa-Pro aminopeptidase K01271 - 3.4.13.9 2.145e-207 668.0
BYD3_k127_4789723_6 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001779 594.0
BYD3_k127_4789723_7 aerobic-type carbon monoxide dehydrogenase, large subunit CoxL - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004082 560.0
BYD3_k127_4789723_8 Domain of unknown function (DUF2088) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003633 488.0
BYD3_k127_4789723_9 aerobic-type carbon monoxide dehydrogenase, large subunit CoxL - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003796 467.0
BYD3_k127_4840353_0 Carboxypeptidase regulatory-like domain - - - 6.103e-220 722.0
BYD3_k127_4840353_1 Carboxypeptidase regulatory-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000079 580.0
BYD3_k127_4840353_10 - - - - 0.0000000000000000000000000000001486 134.0
BYD3_k127_4840353_11 - - - - 0.000000000000000000000000000004843 131.0
BYD3_k127_4840353_12 - - - - 0.000000000000000000000008254 111.0
BYD3_k127_4840353_13 - - - - 0.00000000000000000000002884 109.0
BYD3_k127_4840353_14 - - - - 0.0000000000000000000003163 100.0
BYD3_k127_4840353_16 - - - - 0.000000000000000000001319 98.0
BYD3_k127_4840353_17 - - - - 0.000000000000000000001696 106.0
BYD3_k127_4840353_19 - - - - 0.00000000000000001091 93.0
BYD3_k127_4840353_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001953 340.0
BYD3_k127_4840353_20 - - - - 0.00000000000000002503 88.0
BYD3_k127_4840353_21 - - - - 0.0000000000000003092 89.0
BYD3_k127_4840353_22 - - - - 0.000000000001502 74.0
BYD3_k127_4840353_23 - - - - 0.00000000002905 70.0
BYD3_k127_4840353_24 Cytochrome c - - - 0.00000000003096 75.0
BYD3_k127_4840353_26 - - - - 0.00000007831 63.0
BYD3_k127_4840353_27 PFAM blue (type 1) copper domain protein - - - 0.00006017 53.0
BYD3_k127_4840353_28 - - - - 0.0002084 52.0
BYD3_k127_4840353_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002484 289.0
BYD3_k127_4840353_4 TonB-dependent receptor - - - 0.000000000000000000000000000000000000000000000000000000000000004228 246.0
BYD3_k127_4840353_5 Carboxypeptidase regulatory-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000355 222.0
BYD3_k127_4840353_6 Peptidase, M16 K07263 - - 0.000000000000000000000000000000000000000000000000000000005652 213.0
BYD3_k127_4840353_7 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000398 148.0
BYD3_k127_4840353_8 - - - - 0.0000000000000000000000000000000002294 142.0
BYD3_k127_4840353_9 - - - - 0.0000000000000000000000000000000005831 143.0
BYD3_k127_484195_0 Putative glucoamylase K13688 - - 0.0 2397.0
BYD3_k127_484195_1 Glycogen debranching enzyme - - - 0.0 1206.0
BYD3_k127_484195_10 carboxymethylenebutenolidase activity K01061 - 3.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002321 507.0
BYD3_k127_484195_100 PFAM Flp Fap pilin component K02651 - - 0.0001484 47.0
BYD3_k127_484195_102 glyoxalase bleomycin resistance protein dioxygenase - - - 0.0002533 49.0
BYD3_k127_484195_11 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009508 520.0
BYD3_k127_484195_12 Sulfatase-modifying factor enzyme 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000316 480.0
BYD3_k127_484195_13 COG0457 FOG TPR repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003256 484.0
BYD3_k127_484195_14 Putative methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001484 470.0
BYD3_k127_484195_15 Adenylate and Guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009882 464.0
BYD3_k127_484195_16 lysine biosynthetic process via aminoadipic acid - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002526 435.0
BYD3_k127_484195_17 COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000147 411.0
BYD3_k127_484195_18 ATPase activity K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000474 400.0
BYD3_k127_484195_19 Transmembrane secretion effector - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003738 388.0
BYD3_k127_484195_2 - - - - 0.0 1058.0
BYD3_k127_484195_20 Carbohydrate family 9 binding domain-like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000121 400.0
BYD3_k127_484195_21 Polyphosphate kinase 2 (PPK2) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008645 379.0
BYD3_k127_484195_22 Rhomboid family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002958 372.0
BYD3_k127_484195_23 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) K00575 - 2.1.1.80 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000308 375.0
BYD3_k127_484195_24 Belongs to the CDP-alcohol phosphatidyltransferase class-I family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001805 358.0
BYD3_k127_484195_25 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002489 328.0
BYD3_k127_484195_26 Branched-chain-amino-acid aminotransferase-like protein 3 K18482 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008153,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009987,GO:0016053,GO:0019438,GO:0019752,GO:0032787,GO:0042537,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046394,GO:0046482,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.3.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005384 317.0
BYD3_k127_484195_27 Histone methylation protein DOT1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003336 306.0
BYD3_k127_484195_28 ABC-2 type transporter K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000704 301.0
BYD3_k127_484195_29 Major Facilitator K03301 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000259 304.0
BYD3_k127_484195_3 PFAM ABC transporter transmembrane K06147 - - 3.964e-273 851.0
BYD3_k127_484195_30 FAD dependent oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001561 292.0
BYD3_k127_484195_31 metal-dependent hydrolase with the TIM-barrel fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001474 295.0
BYD3_k127_484195_32 PFAM ATP-binding region, ATPase domain protein K02482,K10819 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003 296.0
BYD3_k127_484195_33 PFAM metal-dependent phosphohydrolase, HD sub domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005803 287.0
BYD3_k127_484195_34 ABC-2 type transporter K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001061 272.0
BYD3_k127_484195_35 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006374 281.0
BYD3_k127_484195_36 Glycosyltransferase Family 4 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000173 270.0
BYD3_k127_484195_37 metal-dependent hydrolase with the TIM-barrel fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001916 275.0
BYD3_k127_484195_38 RibD C-terminal domain K00082,K11752 - 1.1.1.193,3.5.4.26 0.0000000000000000000000000000000000000000000000000000000000000000000000184 263.0
BYD3_k127_484195_39 AhpC/TSA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003787 244.0
BYD3_k127_484195_4 Carboxypeptidase regulatory-like domain - - - 5.065e-215 706.0
BYD3_k127_484195_40 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 GO:0003674,GO:0003824,GO:0003933,GO:0003935,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0008686,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016787,GO:0016810,GO:0016814,GO:0016829,GO:0016830,GO:0017144,GO:0018130,GO:0019238,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 3.5.4.25,4.1.99.12 0.00000000000000000000000000000000000000000000000000000000000000000001687 240.0
BYD3_k127_484195_41 translation initiation factor activity K06996 - - 0.00000000000000000000000000000000000000000000000000000000000000006989 233.0
BYD3_k127_484195_42 DinB superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000004281 222.0
BYD3_k127_484195_43 AAA ATPase domain - - - 0.00000000000000000000000000000000000000000000000000000000005781 223.0
BYD3_k127_484195_44 AAA ATPase domain - - - 0.00000000000000000000000000000000000000000000000000000000009977 222.0
BYD3_k127_484195_45 hydrolase (HAD superfamily) K01560,K07025,K08723 - 3.1.3.5,3.8.1.2 0.0000000000000000000000000000000000000000000000000000000004594 210.0
BYD3_k127_484195_46 protein kinase activity - - - 0.00000000000000000000000000000000000000000000000000000000278 218.0
BYD3_k127_484195_47 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000000000000000001463 203.0
BYD3_k127_484195_48 protein-(glutamine-N5) methyltransferase activity - - - 0.0000000000000000000000000000000000000000000000000000001523 207.0
BYD3_k127_484195_49 negative regulation of transcription, DNA-templated - - - 0.00000000000000000000000000000000000000000000000000001124 191.0
BYD3_k127_484195_5 cellulose binding - - - 5.785e-211 659.0
BYD3_k127_484195_50 6-pyruvoyl tetrahydropterin synthase - - - 0.00000000000000000000000000000000000000000000000000004228 190.0
BYD3_k127_484195_51 CDP-alcohol phosphatidyltransferase - - - 0.0000000000000000000000000000000000000000000000000001508 194.0
BYD3_k127_484195_52 methyltransferase K00559 - 2.1.1.41 0.00000000000000000000000000000000000000000000000001316 195.0
BYD3_k127_484195_53 Tetratricopeptide repeats K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000001533 207.0
BYD3_k127_484195_54 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.00000000000000000000000000000000000000000000001475 185.0
BYD3_k127_484195_55 DNA-templated transcription, initiation K02405 - - 0.0000000000000000000000000000000000000000000003165 173.0
BYD3_k127_484195_56 Putative MetA-pathway of phenol degradation - - - 0.00000000000000000000000000000000000000000001151 174.0
BYD3_k127_484195_57 Carboxylesterase family - - - 0.0000000000000000000000000000000000000000002848 177.0
BYD3_k127_484195_58 Tellurite resistance protein TerB - - - 0.0000000000000000000000000000000000000000003901 163.0
BYD3_k127_484195_59 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) - - - 0.0000000000000000000000000000000000000000006273 171.0
BYD3_k127_484195_6 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455 - - 9.122e-202 645.0
BYD3_k127_484195_60 - - - - 0.000000000000000000000000000000000000000002192 167.0
BYD3_k127_484195_61 CDP-alcohol phosphatidyltransferase - - - 0.000000000000000000000000000000000000000004502 164.0
BYD3_k127_484195_62 EamA-like transporter family K07790 - - 0.00000000000000000000000000000000000000001864 164.0
BYD3_k127_484195_63 Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin - - - 0.0000000000000000000000000000000000000003552 153.0
BYD3_k127_484195_64 helix_turn_helix, cAMP Regulatory protein K01420 - - 0.000000000000000000000000000000000000002209 156.0
BYD3_k127_484195_65 NHL repeat - - - 0.00000000000000000000000000000000000002496 159.0
BYD3_k127_484195_66 - - - - 0.000000000000000000000000000000000001547 142.0
BYD3_k127_484195_67 - - - - 0.000000000000000000000000000000000002232 143.0
BYD3_k127_484195_68 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000003331 145.0
BYD3_k127_484195_69 TIR domain - - - 0.000000000000000000000000000000000004509 153.0
BYD3_k127_484195_7 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008763 609.0
BYD3_k127_484195_71 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000001642 142.0
BYD3_k127_484195_72 NHL repeat containing protein - - - 0.000000000000000000000000000000000216 149.0
BYD3_k127_484195_73 - - - - 0.000000000000000000000000000005428 126.0
BYD3_k127_484195_74 Antibiotic biosynthesis monooxygenase - - - 0.0000000000000000000000000009445 119.0
BYD3_k127_484195_75 - - - - 0.000000000000000000000000008808 123.0
BYD3_k127_484195_76 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000001958 118.0
BYD3_k127_484195_77 - - - - 0.0000000000000000000000007932 115.0
BYD3_k127_484195_78 Transglycosylase associated protein - - - 0.0000000000000000000006581 100.0
BYD3_k127_484195_79 - - - - 0.00000000000000000000116 103.0
BYD3_k127_484195_8 Aminotransferase class I and II K11358 - 2.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003018 565.0
BYD3_k127_484195_80 DoxX K15977 - - 0.000000000000000000001243 100.0
BYD3_k127_484195_82 - - - - 0.0000000000000000001446 98.0
BYD3_k127_484195_83 Domain of unknown function (DUF202) K00389 - - 0.0000000000000000003901 95.0
BYD3_k127_484195_84 - - - - 0.000000000000000000633 96.0
BYD3_k127_484195_86 Belongs to the ompA family K03640 - - 0.00000000000000000327 99.0
BYD3_k127_484195_87 - - - - 0.00000000000000351 83.0
BYD3_k127_484195_88 Endonuclease/Exonuclease/phosphatase family - - - 0.000000000000007135 85.0
BYD3_k127_484195_9 Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues K01299 - 3.4.17.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002573 558.0
BYD3_k127_484195_90 lyase activity - - - 0.00000000000002313 87.0
BYD3_k127_484195_92 - - - - 0.0000000008663 64.0
BYD3_k127_484195_93 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.0000005819 55.0
BYD3_k127_484195_94 PFAM Antibiotic biosynthesis monooxygenase - - - 0.000001062 55.0
BYD3_k127_484195_95 Ankyrin repeats (3 copies) - - - 0.000001542 60.0
BYD3_k127_484195_96 peptidyl-tyrosine sulfation - - - 0.000003128 59.0
BYD3_k127_484195_97 Putative regulatory protein - - - 0.000003286 52.0
BYD3_k127_484195_98 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.00007871 53.0
BYD3_k127_484195_99 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.00008575 52.0
BYD3_k127_4897187_0 CarboxypepD_reg-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003733 417.0
BYD3_k127_4920903_0 Domain of unknown function (DUF4172) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001688 547.0
BYD3_k127_4920903_1 Protein tyrosine kinase K08282,K12132 - 2.7.11.1 0.0000000000000000000000000000004502 130.0
BYD3_k127_4998441_0 Elongation factor G, domain IV K02355 - - 1.222e-243 771.0
BYD3_k127_4998441_1 Type II secretion system (T2SS), protein E, N-terminal domain K02454 - - 5.686e-219 693.0
BYD3_k127_4998441_10 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006163 321.0
BYD3_k127_4998441_11 Metallopeptidase family M24 K01265 - 3.4.11.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005625 306.0
BYD3_k127_4998441_12 His Kinase A (phosphoacceptor) domain K02668 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008284 310.0
BYD3_k127_4998441_13 ABC transporter K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002487 296.0
BYD3_k127_4998441_14 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006417,GO:0006450,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0015935,GO:0019222,GO:0019843,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032268,GO:0032270,GO:0032991,GO:0034248,GO:0034250,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0045727,GO:0045903,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0060255,GO:0065007,GO:0065008,GO:0080090,GO:0097159,GO:1901363,GO:1990904,GO:2000112 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008818 289.0
BYD3_k127_4998441_15 COGs COG0577 ABC-type antimicrobial peptide transport system permease component K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000009459 284.0
BYD3_k127_4998441_16 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004299 269.0
BYD3_k127_4998441_17 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004997 273.0
BYD3_k127_4998441_18 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002671 259.0
BYD3_k127_4998441_19 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005,K15727 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006146 268.0
BYD3_k127_4998441_2 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 GO:0002790,GO:0003674,GO:0005048,GO:0005215,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006616,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0022857,GO:0022884,GO:0031224,GO:0031226,GO:0031522,GO:0032940,GO:0032978,GO:0032991,GO:0033036,GO:0033218,GO:0033365,GO:0034613,GO:0042277,GO:0042886,GO:0042887,GO:0043952,GO:0044425,GO:0044459,GO:0044464,GO:0045047,GO:0045184,GO:0046903,GO:0046907,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0061024,GO:0065002,GO:0070727,GO:0070972,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0071944,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:1904680 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000124 600.0
BYD3_k127_4998441_20 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 - - 0.000000000000000000000000000000000000000000000000000000000000000001346 229.0
BYD3_k127_4998441_21 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 - - 0.000000000000000000000000000000000000000000000000000000000000006905 220.0
BYD3_k127_4998441_22 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.00000000000000000000000000000000000000000000000000000000000001725 227.0
BYD3_k127_4998441_23 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 - - 0.00000000000000000000000000000000000000000000000000000000000004933 218.0
BYD3_k127_4998441_24 - - - - 0.0000000000000000000000000000000000000000000000000000000002416 217.0
BYD3_k127_4998441_25 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.0000000000000000000000000000000000000000000000000000000006472 209.0
BYD3_k127_4998441_26 One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome K02926 - - 0.0000000000000000000000000000000000000000000000000000001678 200.0
BYD3_k127_4998441_27 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 - - 0.00000000000000000000000000000000000000000000000000001706 191.0
BYD3_k127_4998441_28 Involved in the binding of tRNA to the ribosomes K02946 - - 0.000000000000000000000000000000000000000000000000001462 184.0
BYD3_k127_4998441_29 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 - - 0.00000000000000000000000000000000000000000000000003192 182.0
BYD3_k127_4998441_3 Ammonium Transporter K03320 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003961 564.0
BYD3_k127_4998441_30 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 - - 0.0000000000000000000000000000000000000000000000000334 182.0
BYD3_k127_4998441_31 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000000000000000000000001719 180.0
BYD3_k127_4998441_32 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 - - 0.0000000000000000000000000000000000000000000003546 171.0
BYD3_k127_4998441_33 - K00712 - 2.4.1.52 0.00000000000000000000000000000000000000000002135 185.0
BYD3_k127_4998441_34 binds to the 23S rRNA K02876 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000000000000005061 166.0
BYD3_k127_4998441_35 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 - - 0.0000000000000000000000000000000000000008578 154.0
BYD3_k127_4998441_36 Nitrogen regulatory protein P-II K04751,K04752 - - 0.00000000000000000000000000000000000383 144.0
BYD3_k127_4998441_37 Ribosomal protein L17 K02879 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000000006388 145.0
BYD3_k127_4998441_38 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast K02881 - - 0.00000000000000000000000000000000001788 139.0
BYD3_k127_4998441_39 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit K02895 - - 0.00000000000000000000000000000000008732 136.0
BYD3_k127_4998441_4 Type II/IV secretion system protein K02669 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001155 526.0
BYD3_k127_4998441_40 Histidine kinase K02668,K07708 - 2.7.13.3 0.0000000000000000000000000000000004682 146.0
BYD3_k127_4998441_41 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 - - 0.000000000000000000000000009498 116.0
BYD3_k127_4998441_42 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 - - 0.00000000000000000000000051 108.0
BYD3_k127_4998441_43 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 - - 0.00000000000000000000005921 101.0
BYD3_k127_4998441_44 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 - - 0.000000000000000001982 94.0
BYD3_k127_4998441_45 COG2931, RTX toxins and related Ca2 -binding proteins K20276 - - 0.000000000000000006185 99.0
BYD3_k127_4998441_46 Thiol disulfide interchange protein dsbA - - - 0.00000000000000001776 95.0
BYD3_k127_4998441_47 Pfam:N_methyl_2 - - - 0.0000000000000001602 88.0
BYD3_k127_4998441_48 Belongs to the bacterial ribosomal protein bL36 family K02919 - - 0.00000000000002891 74.0
BYD3_k127_4998441_49 Ribosomal protein L30 K02907 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0008150,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0040007,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000001522 72.0
BYD3_k127_4998441_5 phosphorelay signal transduction system K02667 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003514 490.0
BYD3_k127_4998441_50 - - - - 0.0000000000005207 82.0
BYD3_k127_4998441_51 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.0000000005462 70.0
BYD3_k127_4998441_52 Belongs to the universal ribosomal protein uL29 family K02904 - - 0.000000001139 66.0
BYD3_k127_4998441_53 - - - - 0.00000008557 61.0
BYD3_k127_4998441_54 PFAM Uncharacterised protein family (UPF0164) - - - 0.0006014 51.0
BYD3_k127_4998441_6 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 - 2.7.7.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001615 475.0
BYD3_k127_4998441_7 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen assimilation and metabolism K00990 - 2.7.7.59 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002767 451.0
BYD3_k127_4998441_8 PFAM Type II secretion system F domain K02653 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001213 419.0
BYD3_k127_4998441_9 rRNA binding K02886 GO:0000027,GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046872,GO:0046914,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002769 400.0
BYD3_k127_5143711_0 Tannase and feruloyl esterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002767 331.0
BYD3_k127_5200991_0 NapC/NirT cytochrome c family, N-terminal region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002447 383.0
BYD3_k127_5200991_1 Cytochrome c K00413 - - 0.00000000001523 70.0
BYD3_k127_5200991_2 PFAM Doubled CXXCH motif - - - 0.0009916 48.0
BYD3_k127_5211575_0 - - - - 0.00000000000000000000000000000000000000000000000001661 193.0
BYD3_k127_5211575_1 HD domain - - - 0.0000000000000000000000000000000000000000000000003458 196.0
BYD3_k127_5211575_2 - - - - 0.0000000000000000002742 98.0
BYD3_k127_5211575_3 WD40-like Beta Propeller Repeat - - - 0.0000000001147 67.0
BYD3_k127_5219621_0 transposase IS116 IS110 IS902 family K07486 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003969 328.0
BYD3_k127_5219621_1 acetyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001099 275.0
BYD3_k127_5219621_2 Integrase catalytic - - - 0.000000000000000000000000000000000000000000000000000001083 198.0
BYD3_k127_5219621_3 - - - - 0.0000000000000000000000000000001586 130.0
BYD3_k127_524106_0 Alpha amylase, catalytic domain K06044 - 5.4.99.15 5.136e-284 901.0
BYD3_k127_524106_1 transport - - - 1.648e-197 652.0
BYD3_k127_524106_10 Peptidase, M16 K07263 - - 0.000000000000000000000000000000000000000000000000005441 195.0
BYD3_k127_524106_11 Helix-hairpin-helix motif K02237 - - 0.000000000000000000000008548 107.0
BYD3_k127_524106_12 - - - - 0.00000000000000007667 93.0
BYD3_k127_524106_13 - - - - 0.0000000000000617 78.0
BYD3_k127_524106_14 Heavy-metal resistance - - - 0.000000002116 66.0
BYD3_k127_524106_2 cytochrome C peroxidase K00428 - 1.11.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007218 417.0
BYD3_k127_524106_3 PLD-like domain K06131 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005483 386.0
BYD3_k127_524106_4 Sugar (and other) transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001033 384.0
BYD3_k127_524106_5 lysine biosynthetic process via aminoadipic acid - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004474 380.0
BYD3_k127_524106_6 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001043 333.0
BYD3_k127_524106_7 metallophosphoesterase K07096 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001824 329.0
BYD3_k127_524106_8 response regulator K07668,K07775 - - 0.00000000000000000000000000000000000000000000000000000000000002356 223.0
BYD3_k127_524106_9 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K07642 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000002533 210.0
BYD3_k127_5260560_0 Carboxypeptidase regulatory-like domain - - - 6.244e-220 721.0
BYD3_k127_5260560_1 Transport of potassium into the cell K03549 - - 1.735e-215 686.0
BYD3_k127_5260560_10 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006093 441.0
BYD3_k127_5260560_11 Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003116 435.0
BYD3_k127_5260560_12 Domain of unknown function (DUF4139) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007358 403.0
BYD3_k127_5260560_13 PhoD-like phosphatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000624 371.0
BYD3_k127_5260560_14 COG0569 K transport systems NAD-binding component K03499 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001923 337.0
BYD3_k127_5260560_15 methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001348 323.0
BYD3_k127_5260560_16 hydrolase activity, acting on ester bonds - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001527 319.0
BYD3_k127_5260560_17 AI-2E family transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003823 317.0
BYD3_k127_5260560_18 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003909 303.0
BYD3_k127_5260560_19 NHL repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005302 282.0
BYD3_k127_5260560_2 histidine kinase A domain protein K02482 - 2.7.13.3 7.986e-199 646.0
BYD3_k127_5260560_20 gluconolactonase activity K01179,K07004,K14274 - 3.2.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000006441 288.0
BYD3_k127_5260560_21 COG0739 Membrane proteins related to metalloendopeptidases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003549 254.0
BYD3_k127_5260560_22 KR domain K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000002127 240.0
BYD3_k127_5260560_23 Arylsulfotransferase (ASST) - - - 0.00000000000000000000000000000000000000000000000000000000000000003872 244.0
BYD3_k127_5260560_24 Transcriptional regulatory protein, C terminal - - - 0.0000000000000000000000000000000000000000000000000000000000004313 224.0
BYD3_k127_5260560_25 - - - - 0.0000000000000000000000000000000000000000000000000000001258 205.0
BYD3_k127_5260560_26 Sodium/hydrogen exchanger family - - - 0.000000000000000000000000000000000000000000000000000004093 218.0
BYD3_k127_5260560_27 Uncharacterised protein family UPF0066 - - - 0.00000000000000000000000000000000000000000000000000009094 190.0
BYD3_k127_5260560_28 Calcium/calmodulin dependent protein kinase II association domain - - - 0.00000000000000000000000000000000000000000000000002673 187.0
BYD3_k127_5260560_29 - - - - 0.0000000000000000000000000000000000000000000000008602 183.0
BYD3_k127_5260560_3 Polyphosphate kinase 2 (PPK2) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007314 596.0
BYD3_k127_5260560_30 heme binding K08259 - 3.4.24.75 0.00000000000000000000000000000000000000000000005652 183.0
BYD3_k127_5260560_31 OmpA family - - - 0.00000000000000000000000000000000000000000000009558 187.0
BYD3_k127_5260560_32 Low temperature requirement A - - - 0.00000000000000000000000000000000000000000001271 177.0
BYD3_k127_5260560_33 Polyketide cyclase / dehydrase and lipid transport - - - 0.000000000000000000000000000000000000000009487 159.0
BYD3_k127_5260560_34 DinB family - - - 0.00000000000000000000000000000000000000003486 157.0
BYD3_k127_5260560_35 PhoQ Sensor - - - 0.00000000000000000000000000000000000000007861 170.0
BYD3_k127_5260560_36 GDSL-like Lipase/Acylhydrolase family - - - 0.000000000000000000000000000000000000002914 155.0
BYD3_k127_5260560_37 DnaJ molecular chaperone homology domain - - - 0.000000000000000000000000000000000000003711 153.0
BYD3_k127_5260560_38 amine dehydrogenase activity - - - 0.0000000000000000000000000000000000002079 157.0
BYD3_k127_5260560_39 Removes the phosphate from trehalose 6-phosphate to produce free trehalose K01087 - 3.1.3.12 0.0000000000000000000000000000000000003456 153.0
BYD3_k127_5260560_4 TonB-dependent Receptor Plug Domain K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002638 590.0
BYD3_k127_5260560_40 DNA-templated transcription, initiation K03088 - - 0.00000000000000000000000000000000002236 146.0
BYD3_k127_5260560_41 - - - - 0.00000000000000000000000000000008135 141.0
BYD3_k127_5260560_42 Galactose oxidase, central domain - - - 0.000000000000000000000000004796 130.0
BYD3_k127_5260560_43 Tyrosine phosphatase family - - - 0.0000000000000000000000000626 116.0
BYD3_k127_5260560_44 cheY-homologous receiver domain - - - 0.0000000000000000000000008451 113.0
BYD3_k127_5260560_45 Tetratricopeptide repeat - - - 0.00000000000000000000008423 114.0
BYD3_k127_5260560_46 - - - - 0.00000000000000000002467 96.0
BYD3_k127_5260560_47 TIGRFAM Diguanylate cyclase - - - 0.0000000000000003668 90.0
BYD3_k127_5260560_49 - - - - 0.000000002796 64.0
BYD3_k127_5260560_5 COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases K14257 - 1.14.19.49 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001 552.0
BYD3_k127_5260560_50 AsmA family K07289 - - 0.00000001343 67.0
BYD3_k127_5260560_51 Esterase PHB depolymerase - - - 0.0000000622 67.0
BYD3_k127_5260560_52 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.000004521 59.0
BYD3_k127_5260560_53 Helix-turn-helix domain K15539 - - 0.00000829 58.0
BYD3_k127_5260560_6 arylsulfatase activity K01132 - 3.1.6.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001436 534.0
BYD3_k127_5260560_7 Peptidase dimerisation domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002649 522.0
BYD3_k127_5260560_8 signal transduction histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002157 527.0
BYD3_k127_5260560_9 PFAM Cation K03498 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003898 439.0
BYD3_k127_5280386_0 Oxidoreductase molybdopterin binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003416 432.0
BYD3_k127_5280386_1 Glyoxalase-like domain K08234 - - 0.00000000000000000000000000000000000000000000006676 169.0
BYD3_k127_5280386_2 Phospholipid methyltransferase - - - 0.0000000000000000000514 96.0
BYD3_k127_5280386_3 PIN domain - - - 0.000002943 53.0
BYD3_k127_5330729_0 Carbamoyl-phosphate synthetase large chain domain protein K01955 - 6.3.5.5 0.0 1384.0
BYD3_k127_5330729_1 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 GO:0003674,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.7 3.207e-260 829.0
BYD3_k127_5330729_10 Serine threonine protein kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002601 327.0
BYD3_k127_5330729_11 Amidohydrolase K03392 - 4.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000974 314.0
BYD3_k127_5330729_12 Bacillithiol biosynthesis BshC K22136 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005262 320.0
BYD3_k127_5330729_13 Metallo-beta-lactamase superfamily K06167 - 3.1.4.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006156 280.0
BYD3_k127_5330729_14 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.0000000000000000000000000000000000000000000000000000000000000000000000006372 256.0
BYD3_k127_5330729_15 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004346 253.0
BYD3_k127_5330729_16 Nucleoside triphosphate pyrophosphohydrolase K02499,K04765 GO:0003674,GO:0003824,GO:0006139,GO:0006163,GO:0006195,GO:0006203,GO:0006213,GO:0006220,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0007154,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009147,GO:0009149,GO:0009151,GO:0009155,GO:0009164,GO:0009166,GO:0009199,GO:0009200,GO:0009203,GO:0009204,GO:0009208,GO:0009210,GO:0009211,GO:0009213,GO:0009215,GO:0009217,GO:0009218,GO:0009219,GO:0009222,GO:0009223,GO:0009259,GO:0009261,GO:0009262,GO:0009264,GO:0009267,GO:0009394,GO:0009605,GO:0009987,GO:0009991,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0019693,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0034656,GO:0042454,GO:0042594,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0046046,GO:0046047,GO:0046051,GO:0046052,GO:0046060,GO:0046061,GO:0046070,GO:0046075,GO:0046076,GO:0046080,GO:0046081,GO:0046131,GO:0046133,GO:0046135,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0050896,GO:0051716,GO:0055086,GO:0071496,GO:0071704,GO:0072521,GO:0072523,GO:0072527,GO:0072529,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1901657,GO:1901658 3.6.1.9 0.00000000000000000000000000000000000000000000000000000000000000000002123 243.0
BYD3_k127_5330729_17 Metallo-beta-lactamase superfamily K02238 - - 0.00000000000000000000000000000000000000000000000000000000000000000006572 259.0
BYD3_k127_5330729_18 XdhC and CoxI family K07402 - - 0.000000000000000000000000000000000000000000000000000000000000000004244 235.0
BYD3_k127_5330729_19 - - - - 0.00000000000000000000000000000000000000000000000000000000000000006654 228.0
BYD3_k127_5330729_2 Carboxypeptidase regulatory-like domain - - - 8.099e-210 699.0
BYD3_k127_5330729_20 amine dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000001894 233.0
BYD3_k127_5330729_21 Aminopeptidase P, N-terminal domain K01262 - 3.4.11.9 0.000000000000000000000000000000000000000000000000000000000000003172 234.0
BYD3_k127_5330729_22 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.00000000000000000000000000000000000000000000000000000000002093 218.0
BYD3_k127_5330729_23 Aminotransferase class-III K00823 - 2.6.1.19 0.00000000000000000000000000000000000000000000000000000001839 202.0
BYD3_k127_5330729_24 - - - - 0.0000000000000000000000000000000000001854 155.0
BYD3_k127_5330729_25 von Willebrand factor, type A - - - 0.000000000000000000000000000000000000186 153.0
BYD3_k127_5330729_26 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 GO:0000166,GO:0000774,GO:0001871,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0008150,GO:0009986,GO:0017076,GO:0030234,GO:0030246,GO:0030247,GO:0030554,GO:0036094,GO:0044464,GO:0050790,GO:0051082,GO:0060589,GO:0060590,GO:0065007,GO:0065009,GO:0097159,GO:0098772,GO:1901265,GO:1901363,GO:2001065 - 0.00000000000000000000000000000000002078 141.0
BYD3_k127_5330729_27 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.00000000000000000000000000006385 128.0
BYD3_k127_5330729_28 - - - - 0.000000000000000000000000004393 115.0
BYD3_k127_5330729_29 Ribosomal protein L11 methyltransferase K02687 - - 0.00000000000000000000000009572 123.0
BYD3_k127_5330729_3 Transglycosylase K05365 - 2.4.1.129,3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007843 510.0
BYD3_k127_5330729_30 TM2 domain - - - 0.0000000000000000000001398 100.0
BYD3_k127_5330729_31 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.0000000000000000001394 101.0
BYD3_k127_5330729_32 - - - - 0.00000000000000003092 89.0
BYD3_k127_5330729_33 Domain of unknown function (DUF1844) - - - 0.0000000000000003995 83.0
BYD3_k127_5330729_34 phosphorelay sensor kinase activity - - - 0.0001609 47.0
BYD3_k127_5330729_4 Type II/IV secretion system protein K02669 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005191 478.0
BYD3_k127_5330729_5 TIGRFAM carbamoyl-phosphate synthase, small subunit K01956 - 6.3.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004314 445.0
BYD3_k127_5330729_6 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 - 6.1.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002154 439.0
BYD3_k127_5330729_7 DnaJ central domain K03686 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000192 434.0
BYD3_k127_5330729_8 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002325 407.0
BYD3_k127_5330729_9 Two component, sigma54 specific, transcriptional regulator, Fis family K02481,K07713 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001715 369.0
BYD3_k127_5331901_0 oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor K00171,K03737 - 1.2.7.1 0.0 2066.0
BYD3_k127_5331901_1 Insulinase (Peptidase family M16) K07263 - - 2.441e-315 991.0
BYD3_k127_5331901_10 lysine biosynthetic process via aminoadipic acid - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002007 432.0
BYD3_k127_5331901_11 Belongs to the cysteine synthase cystathionine beta- synthase family K12339,K21148 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004124,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006534,GO:0006535,GO:0006563,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0016829,GO:0016846,GO:0019344,GO:0019752,GO:0019842,GO:0030170,GO:0032991,GO:0033847,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0048037,GO:0050662,GO:0070279,GO:0071704,GO:0080146,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.5.1.113,2.5.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003488 399.0
BYD3_k127_5331901_12 Deoxyhypusine synthase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001168 392.0
BYD3_k127_5331901_13 Cyclic nucleotide-monophosphate binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006783 395.0
BYD3_k127_5331901_14 HD domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001528 396.0
BYD3_k127_5331901_15 PFAM multicopper oxidase type - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002 381.0
BYD3_k127_5331901_16 TIGRFAM argininosuccinate lyase K01755 - 4.3.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001648 384.0
BYD3_k127_5331901_17 PFAM Aminotransferase class-III K00821 - 2.6.1.11,2.6.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006272 347.0
BYD3_k127_5331901_18 Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11785 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005965 339.0
BYD3_k127_5331901_19 transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005973 338.0
BYD3_k127_5331901_2 Belongs to the argininosuccinate synthase family. Type K01940 GO:0000050,GO:0000053,GO:0003674,GO:0003824,GO:0004055,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006575,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0019627,GO:0019752,GO:0034641,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:0072350,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 6.3.4.5 5.522e-248 770.0
BYD3_k127_5331901_20 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 - 2.3.1.1,2.3.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002293 332.0
BYD3_k127_5331901_21 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008345 317.0
BYD3_k127_5331901_22 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 - 2.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000797 301.0
BYD3_k127_5331901_23 Enoyl- acyl-carrier-protein reductase NADH K00208 - 1.3.1.10,1.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000267 292.0
BYD3_k127_5331901_24 Sigma-54 factor interaction domain-containing protein K02481,K07712,K07713 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001381 282.0
BYD3_k127_5331901_25 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 GO:0003674,GO:0003824,GO:0003942,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016491,GO:0016620,GO:0016903,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.2.1.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000007706 273.0
BYD3_k127_5331901_26 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002954 275.0
BYD3_k127_5331901_27 LamB/YcsF family K07160 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000006473 261.0
BYD3_k127_5331901_28 A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters K04488 - - 0.00000000000000000000000000000000000000000000000000000000000000000008227 232.0
BYD3_k127_5331901_29 Belongs to the metallo-dependent hydrolases superfamily. NagA family K01443 - 3.5.1.25 0.000000000000000000000000000000000000000000000000000000000000000006365 241.0
BYD3_k127_5331901_3 FAD dependent oxidoreductase - - - 4.027e-200 646.0
BYD3_k127_5331901_30 PFAM ABC transporter related K02013 - 3.6.3.34 0.00000000000000000000000000000000000000000000000000000000000000001488 233.0
BYD3_k127_5331901_31 endonuclease III K01247 - 3.2.2.21 0.00000000000000000000000000000000000000000000000000000001934 203.0
BYD3_k127_5331901_32 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) K06920 - 6.3.4.20 0.00000000000000000000000000000000000000000000000000002386 196.0
BYD3_k127_5331901_33 iron dependent repressor K03709 - - 0.0000000000000000000000000000000000000000000000000003314 203.0
BYD3_k127_5331901_34 Fumarylacetoacetate (FAA) hydrolase family - - - 0.0000000000000000000000000000000000000000000000000007306 198.0
BYD3_k127_5331901_35 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 - 6.3.4.5 0.00000000000000000000000000000000000000000000003767 186.0
BYD3_k127_5331901_36 COG1651 Protein-disulfide isomerase K21990 - - 0.0000000000000000000000000000000000000000000001354 177.0
BYD3_k127_5331901_37 methyltransferase K03183 - 2.1.1.163,2.1.1.201 0.0000000000000000000000000000000000000000001295 168.0
BYD3_k127_5331901_38 COG0720 6-pyruvoyl-tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.0000000000000000000000000000000000000000002477 165.0
BYD3_k127_5331901_39 2Fe-2S iron-sulfur cluster binding domain K04755 - - 0.0000000000000000000000000000000000000000005815 162.0
BYD3_k127_5331901_4 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 3.49e-199 628.0
BYD3_k127_5331901_40 PFAM periplasmic binding protein K02016 - - 0.000000000000000000000000000000000000000004123 175.0
BYD3_k127_5331901_41 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 GO:0003674,GO:0003824,GO:0003991,GO:0005488,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016597,GO:0016740,GO:0016772,GO:0016774,GO:0019752,GO:0031406,GO:0034618,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.8 0.000000000000000000000000000000000000005072 156.0
BYD3_k127_5331901_42 Transcriptional regulator - - - 0.00000000000000000000000000000000000005538 147.0
BYD3_k127_5331901_43 Membrane - - - 0.000000000000000000000000000000000001351 156.0
BYD3_k127_5331901_44 HAD-hyrolase-like K01091 - 3.1.3.18 0.00000000000000000000000000000000003958 144.0
BYD3_k127_5331901_45 Zn-finger in ubiquitin-hydrolases and other protein - - - 0.00000000000000000000000000000000008583 135.0
BYD3_k127_5331901_46 proteolysis - - - 0.000000000000000000000000000000004258 138.0
BYD3_k127_5331901_47 Belongs to the HesB IscA family K13628 - - 0.00000000000000000000000000000001971 129.0
BYD3_k127_5331901_48 Histone methylation protein DOT1 - - - 0.00000000000000000000000000000005805 126.0
BYD3_k127_5331901_49 PFAM heat shock protein DnaJ K04082 - - 0.0000000000000000000000000000008791 133.0
BYD3_k127_5331901_5 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001043 605.0
BYD3_k127_5331901_50 Regulates arginine biosynthesis genes K03402 - - 0.000000000000000000000000002248 116.0
BYD3_k127_5331901_51 Aminoacyl-tRNA editing domain K19055 - - 0.000000000000000000000000007401 117.0
BYD3_k127_5331901_52 PFAM oxidoreductase FAD NAD(P)-binding domain protein - - - 0.000000000000000000000002176 113.0
BYD3_k127_5331901_53 Protein of unknown function (DUF541) K09807 GO:0005575,GO:0005623,GO:0042597,GO:0044464 - 0.0000000000000000000001568 111.0
BYD3_k127_5331901_54 OsmC-like protein K07397 - - 0.0000000000000000000009725 99.0
BYD3_k127_5331901_55 Catalyzes the formation of N-acetyl-L-glutamate from acetyl-CoA and L-glutamate K00619 - 2.3.1.1 0.000000000000000000004381 100.0
BYD3_k127_5331901_56 FeS assembly protein IscX - - - 0.000000000000000000006871 98.0
BYD3_k127_5331901_57 DNA-sulfur modification-associated - - - 0.0000000000000001137 93.0
BYD3_k127_5331901_58 bacterial OsmY and nodulation domain - - - 0.000000000000009918 79.0
BYD3_k127_5331901_59 - - - - 0.00000001644 64.0
BYD3_k127_5331901_6 Mo-molybdopterin cofactor metabolic process K03148,K03636,K21029,K21147 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006534,GO:0006535,GO:0006563,GO:0006732,GO:0006777,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008146,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009108,GO:0009605,GO:0009607,GO:0009987,GO:0016053,GO:0016740,GO:0016772,GO:0016779,GO:0016782,GO:0018130,GO:0019344,GO:0019538,GO:0019637,GO:0019720,GO:0019752,GO:0020012,GO:0030312,GO:0030682,GO:0042783,GO:0043170,GO:0043207,GO:0043436,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0044403,GO:0044413,GO:0044415,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0050896,GO:0051186,GO:0051188,GO:0051189,GO:0051701,GO:0051704,GO:0051707,GO:0051805,GO:0051807,GO:0051810,GO:0051832,GO:0051834,GO:0052173,GO:0052200,GO:0052564,GO:0052572,GO:0061605,GO:0070566,GO:0071704,GO:0071944,GO:0075136,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.7.73,2.7.7.80,2.8.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002427 599.0
BYD3_k127_5331901_60 Carboxypeptidase regulatory-like domain - - - 0.000002197 54.0
BYD3_k127_5331901_61 COG2133 Glucose sorbosone dehydrogenases - - - 0.0001312 50.0
BYD3_k127_5331901_7 Chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HscB K04044 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006137 564.0
BYD3_k127_5331901_8 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004846 482.0
BYD3_k127_5331901_9 Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate K11779,K11784,K18285 - 1.21.98.1,2.5.1.120,2.5.1.77 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003426 457.0
BYD3_k127_5584896_0 epimerase - - - 0.00000000000000000000000000000000000000000000000000000000000000000004981 237.0
BYD3_k127_5584896_1 Esterase PHB depolymerase K03932 - - 0.000000000000000000000000000000000000000000000000000001687 204.0
BYD3_k127_5664086_0 PFAM SAF domain K02279 - - 0.00000000000000000000000000000000000000003528 163.0
BYD3_k127_5664086_1 Type IV leader peptidase family K02278 - 3.4.23.43 0.000000000000000000000001894 111.0
BYD3_k127_5664086_2 TadE-like protein - - - 0.000005731 58.0
BYD3_k127_5726155_0 Elongator protein 3, MiaB family, Radical SAM K04034 - 1.21.98.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003586 551.0
BYD3_k127_5726155_1 GHMP kinases N terminal domain K07031 - 2.7.1.168 0.0000000000000000000000000000000000000000000000000000000000000000000000007952 250.0
BYD3_k127_5814218_0 tRNA-splicing ligase RtcB K14415 - 6.5.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007297 368.0
BYD3_k127_5814218_1 Ribosome-binding factor A - - - 0.000000000003282 73.0
BYD3_k127_5874153_0 FAD linked oxidase domain protein - - - 3.406e-268 859.0
BYD3_k127_5874153_1 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 8.103e-230 723.0
BYD3_k127_5874153_10 histidine kinase HAMP region domain protein K13598 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002873 429.0
BYD3_k127_5874153_11 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis K21071 - 2.7.1.11,2.7.1.90 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000328 402.0
BYD3_k127_5874153_12 PFAM SAICAR synthetase K01923,K13713 - 6.3.2.6,6.3.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004643 385.0
BYD3_k127_5874153_13 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001205 381.0
BYD3_k127_5874153_14 PFAM Allophanate hydrolase subunit 2 K06350 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009068 389.0
BYD3_k127_5874153_15 Belongs to the SIS family. GutQ KpsF subfamily K06041 - 5.3.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007531 364.0
BYD3_k127_5874153_16 PFAM Formiminotransferase K00603 - 2.1.2.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006992 353.0
BYD3_k127_5874153_17 Belongs to the universal ribosomal protein uS2 family K02967 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000113 340.0
BYD3_k127_5874153_18 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001131 347.0
BYD3_k127_5874153_19 Secretin and TonB N terminus short domain K02666 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004347 357.0
BYD3_k127_5874153_2 acetyl-CoA carboxylase, biotin carboxylase K01961 - 6.3.4.14,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003446 597.0
BYD3_k127_5874153_20 Catalyzes the reversible phosphorylation of UMP to UDP K09903 GO:0003674,GO:0003824,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901576 2.7.4.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006369 337.0
BYD3_k127_5874153_21 Citrate transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001149 336.0
BYD3_k127_5874153_22 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) K03110 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001418 323.0
BYD3_k127_5874153_23 pilus assembly protein K02662 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003284 329.0
BYD3_k127_5874153_24 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001147 317.0
BYD3_k127_5874153_25 Belongs to the KdsA family K01627 - 2.5.1.55 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003099 319.0
BYD3_k127_5874153_26 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000141 308.0
BYD3_k127_5874153_27 PFAM alanine racemase domain protein K20757 - 4.3.1.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005227 318.0
BYD3_k127_5874153_28 Belongs to the CinA family K03742 - 3.5.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005227 318.0
BYD3_k127_5874153_29 Type ii and iii secretion system protein K02453 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001095 325.0
BYD3_k127_5874153_3 Sodium:neurotransmitter symporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005633 552.0
BYD3_k127_5874153_30 Cell wall formation K00075 - 1.3.1.98 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005508 308.0
BYD3_k127_5874153_31 Glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001855 302.0
BYD3_k127_5874153_32 Glycosyl hydrolase family 3 N terminal domain K01207 - 3.2.1.52 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002101 304.0
BYD3_k127_5874153_33 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001965 293.0
BYD3_k127_5874153_34 GHMP kinases C terminal K07031 - 2.7.1.168 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009318 284.0
BYD3_k127_5874153_35 PFAM Aminotransferase class I and II K00812 - 2.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002134 285.0
BYD3_k127_5874153_36 tRNA (Guanine-1)-methyltransferase K00554 GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050518,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.228 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004871 276.0
BYD3_k127_5874153_37 DNA polymerase K02347 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000454 278.0
BYD3_k127_5874153_38 Tetratricopeptide repeats K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000007885 269.0
BYD3_k127_5874153_39 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000003148 266.0
BYD3_k127_5874153_4 DNA polymerase X K02347 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002292 561.0
BYD3_k127_5874153_40 Creatinase/Prolidase N-terminal domain K01262,K01271 - 3.4.11.9,3.4.13.9 0.000000000000000000000000000000000000000000000000000000000000000000000000003628 268.0
BYD3_k127_5874153_41 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 - - 0.000000000000000000000000000000000000000000000000000000000000000000000007854 247.0
BYD3_k127_5874153_42 Tetratricopeptide repeat K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000001356 259.0
BYD3_k127_5874153_43 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 - - 0.00000000000000000000000000000000000000000000000000000000001511 211.0
BYD3_k127_5874153_44 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.000000000000000000000000000000000000000000000000000000000512 215.0
BYD3_k127_5874153_45 Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane K19804 - - 0.000000000000000000000000000000000000000000000000000001238 207.0
BYD3_k127_5874153_46 LD-carboxypeptidase K01297 - 3.4.17.13 0.000000000000000000000000000000000000000000000000000008687 200.0
BYD3_k127_5874153_47 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006281,GO:0006298,GO:0006401,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0032299,GO:0032991,GO:0033554,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576 3.1.26.4 0.00000000000000000000000000000000000000000000000000002784 195.0
BYD3_k127_5874153_48 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.000000000000000000000000000000000000000000000002712 180.0
BYD3_k127_5874153_49 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.00000000000000000000000000000000000000000001158 166.0
BYD3_k127_5874153_5 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006844 543.0
BYD3_k127_5874153_50 Lumazine binding domain K00793 GO:0003674,GO:0003824,GO:0004746,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.9 0.000000000000000000000000000000000000000004167 161.0
BYD3_k127_5874153_51 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 GO:0003674,GO:0003824,GO:0004140,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.1.24 0.0000000000000000000000000000000000000164 151.0
BYD3_k127_5874153_52 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.0000000000000000000000000000000000001498 151.0
BYD3_k127_5874153_53 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0009987,GO:0010033,GO:0016032,GO:0016465,GO:0019058,GO:0019068,GO:0032991,GO:0035966,GO:0042221,GO:0042802,GO:0043167,GO:0043169,GO:0044403,GO:0044419,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046872,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0051704,GO:0061077,GO:0101031,GO:1990220 - 0.0000000000000000000000000000000000004912 144.0
BYD3_k127_5874153_54 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 - - 0.00000000000000000000000000000000006673 139.0
BYD3_k127_5874153_55 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 - 2.5.1.3 0.0000000000000000000000000000000001489 143.0
BYD3_k127_5874153_56 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.000000000000000000000000000000000212 143.0
BYD3_k127_5874153_57 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788,K10810 - 2.5.1.3,5.3.99.10 0.0000000000000000000000000000000007753 138.0
BYD3_k127_5874153_58 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.00000000000000000000000000009089 128.0
BYD3_k127_5874153_59 - - - - 0.000000000000000000000000004597 119.0
BYD3_k127_5874153_6 Two component, sigma54 specific, transcriptional regulator, Fis family K13599 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009325 504.0
BYD3_k127_5874153_60 Transglycosylase associated protein - - - 0.0000000000000000000000000137 112.0
BYD3_k127_5874153_61 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.00000000000000000000000005179 117.0
BYD3_k127_5874153_62 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.0000000000000000000000001138 121.0
BYD3_k127_5874153_63 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) K03634 - - 0.00000000000000000000000039 113.0
BYD3_k127_5874153_64 PFAM phosphatidylglycerophosphatase A K01095 - 3.1.3.27 0.000000000000000000000000822 109.0
BYD3_k127_5874153_65 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.0000000000000000000000083 110.0
BYD3_k127_5874153_66 Belongs to the bacterial ribosomal protein bS16 family K02959 GO:0000028,GO:0000217,GO:0000400,GO:0003674,GO:0003676,GO:0003677,GO:0003735,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006259,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0016787,GO:0016788,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0090305,GO:0097159,GO:0140097,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000001179 89.0
BYD3_k127_5874153_67 Belongs to the UPF0109 family K06960 - - 0.000000000000000004259 89.0
BYD3_k127_5874153_69 PFAM Pilus assembly protein PilO K02664 - - 0.00000000000000005882 89.0
BYD3_k127_5874153_7 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY K03106 - 3.6.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002686 486.0
BYD3_k127_5874153_70 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.0000000000000005508 92.0
BYD3_k127_5874153_71 Bacterial regulatory protein, Fis family - - - 0.00000000005635 65.0
BYD3_k127_5874153_72 - - - - 0.0000000001254 65.0
BYD3_k127_5874153_73 Fimbrial assembly protein (PilN) K02663 - - 0.0000000004652 69.0
BYD3_k127_5874153_74 Tetratricopeptide repeats - - - 0.000000008484 63.0
BYD3_k127_5874153_75 RDD family - - - 0.00000002442 66.0
BYD3_k127_5874153_76 Sigma-70 region 2 K03088 - - 0.00000003539 65.0
BYD3_k127_5874153_77 Pilus assembly protein, PilP K02665 - - 0.00000308 57.0
BYD3_k127_5874153_8 D-isomer specific 2-hydroxyacid dehydrogenase K00058 - 1.1.1.399,1.1.1.95 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005129 479.0
BYD3_k127_5874153_9 Mur ligase middle domain K02558 - 6.3.2.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002867 437.0
BYD3_k127_5907128_0 Thioesterase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002633 286.0
BYD3_k127_5907128_1 ABC transporter substrate binding protein K01989 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000389 252.0
BYD3_k127_5907128_2 Belongs to the 'phage' integrase family - - - 0.000000000000000000000000000000000000001063 156.0
BYD3_k127_5907128_3 ABC transporter substrate binding protein K01989 - - 0.00000000000000002324 93.0
BYD3_k127_5970238_0 PFAM bifunctional deaminase-reductase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001424 300.0
BYD3_k127_5970238_1 ubiE/COQ5 methyltransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001116 287.0
BYD3_k127_5970238_2 Beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000001545 229.0
BYD3_k127_5970238_3 Peptidase dimerisation domain K01439,K05831 - 3.5.1.18 0.00000000000000000000000006463 113.0
BYD3_k127_5970238_4 Helix-turn-helix domain - - - 0.000000005677 66.0
BYD3_k127_5970238_5 - - - - 0.0000003471 57.0
BYD3_k127_5970238_6 Beta-lactamase K18372 - - 0.000001323 60.0
BYD3_k127_5970238_7 - - - - 0.00003223 51.0
BYD3_k127_6017870_0 ABC transporter substrate binding protein K01989 - - 0.000000000001931 74.0
BYD3_k127_6017870_1 ABC transporter substrate binding protein - - - 0.00009689 53.0
BYD3_k127_61463_0 Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis K01042 GO:0003674,GO:0003824,GO:0004125,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009059,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016070,GO:0016259,GO:0016260,GO:0016740,GO:0016785,GO:0018130,GO:0019438,GO:0019752,GO:0019842,GO:0030170,GO:0032774,GO:0034641,GO:0034654,GO:0034660,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0048037,GO:0050662,GO:0070279,GO:0071704,GO:0090304,GO:0097056,GO:0097159,GO:0140098,GO:0140101,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.9.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002357 433.0
BYD3_k127_61463_1 Elongation factor Tu domain 2 K03833 - - 0.000000000000000000787 85.0
BYD3_k127_61463_2 peroxiredoxin activity K03564,K07638 - 1.11.1.15,2.7.13.3 0.000000000000004789 85.0
BYD3_k127_6178395_0 Transposase - - - 0.0000000000000000000000000000000000000000000000000000002069 211.0
BYD3_k127_6178395_1 - - - - 0.000000000000003882 88.0
BYD3_k127_6194144_0 Two component transcriptional regulator, LytTR family K02477,K07705 - - 0.0000000000000000000000000000000000000000000000000000000000000000007561 244.0
BYD3_k127_6194144_1 Histidine kinase K02478 - 2.7.13.3 0.0000000000000000000000000000000000000000000000007828 180.0
BYD3_k127_6194144_2 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.00000000000000000000000000000000000000003195 163.0
BYD3_k127_6203838_0 Carboxypeptidase regulatory-like domain - - - 3.007e-214 705.0
BYD3_k127_6203838_1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain K01576,K01652 - 2.2.1.6,4.1.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002623 601.0
BYD3_k127_6203838_10 - - - - 0.0000000000000000000000000000000000000000006439 163.0
BYD3_k127_6203838_11 Thiamine pyrophosphate enzyme, central domain - - - 0.0000000000000000000000000000000000000000105 176.0
BYD3_k127_6203838_12 PFAM SMP-30 Gluconolaconase - - - 0.000000000000000000000000000000000000101 154.0
BYD3_k127_6203838_13 - - - - 0.0000000000000000000000000000001125 134.0
BYD3_k127_6203838_14 COGs COG1629 Outer membrane receptor protein mostly Fe transport K02014 - - 0.00000000000000000000000000001125 138.0
BYD3_k127_6203838_15 - - - - 0.000000000000000000000000003691 124.0
BYD3_k127_6203838_16 - - - - 0.00000000000000000000000002073 120.0
BYD3_k127_6203838_17 - - - - 0.00000000000000000000003038 104.0
BYD3_k127_6203838_18 - - - - 0.000000000000000000003285 98.0
BYD3_k127_6203838_19 - - - - 0.00000000000000001803 93.0
BYD3_k127_6203838_2 Mo-co oxidoreductase dimerisation domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005675 344.0
BYD3_k127_6203838_20 - - - - 0.000000000000005688 83.0
BYD3_k127_6203838_21 Cytochrome c - - - 0.000000000000009683 81.0
BYD3_k127_6203838_22 - - - - 0.000000000007915 72.0
BYD3_k127_6203838_23 acetyltransferases and hydrolases with the alpha beta hydrolase fold - - - 0.00000000177 70.0
BYD3_k127_6203838_24 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.000006086 52.0
BYD3_k127_6203838_25 - - - - 0.0003154 51.0
BYD3_k127_6203838_3 Peptidase, M16 K07263 - - 0.0000000000000000000000000000000000000000000000000000000000000329 231.0
BYD3_k127_6203838_4 - - - - 0.0000000000000000000000000000000000000000000000000000004295 203.0
BYD3_k127_6203838_5 amine dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000001814 202.0
BYD3_k127_6203838_6 Domain of unknown function (DUF4265) - - - 0.0000000000000000000000000000000000000000000000002886 183.0
BYD3_k127_6203838_7 Phospholipase D. Active site motifs. K06131 - - 0.000000000000000000000000000000000000000000000002791 182.0
BYD3_k127_6203838_8 PFAM fumarylacetoacetate (FAA) hydrolase - - - 0.00000000000000000000000000000000000000000000006306 187.0
BYD3_k127_6203838_9 PFAM class II aldolase adducin family protein - - - 0.00000000000000000000000000000000000000000001121 176.0
BYD3_k127_6232894_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004632 435.0
BYD3_k127_6232894_1 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose - - - 0.00000000000000000000000000000000000004365 143.0
BYD3_k127_6238385_0 Glycosyl transferase family group 2 - - - 0.00000000000000000000000000000000000000000000000005898 195.0
BYD3_k127_6238385_1 O-methyltransferase activity - - - 0.000000000000000001559 97.0
BYD3_k127_6238385_2 Methyltransferase FkbM domain - - - 0.0006667 44.0
BYD3_k127_6247096_0 PhoH-like protein K06217 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009591 339.0
BYD3_k127_6247096_1 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.00000000000000000000000004148 114.0
BYD3_k127_6247096_2 CBS domain K03699 - - 0.0000000000000000000000007138 115.0
BYD3_k127_6300518_0 - - - - 0.0 1091.0
BYD3_k127_6300518_1 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004545 630.0
BYD3_k127_6300518_10 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001158 393.0
BYD3_k127_6300518_11 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002458 371.0
BYD3_k127_6300518_12 Polysaccharide deacetylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001865 372.0
BYD3_k127_6300518_13 alpha/beta hydrolase fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005199 359.0
BYD3_k127_6300518_14 lysine biosynthetic process via aminoadipic acid - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009412 374.0
BYD3_k127_6300518_15 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) K07755 - 2.1.1.137 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009621 328.0
BYD3_k127_6300518_16 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002373 317.0
BYD3_k127_6300518_17 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length K04760 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007751 302.0
BYD3_k127_6300518_18 Nitroreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001709 310.0
BYD3_k127_6300518_19 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003215 312.0
BYD3_k127_6300518_2 Pfam Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004631 591.0
BYD3_k127_6300518_20 Acetamidase/Formamidase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002025 299.0
BYD3_k127_6300518_21 Rhodanese-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001417 280.0
BYD3_k127_6300518_22 Protein of unknown function (DUF2950) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006393 273.0
BYD3_k127_6300518_23 amine dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003736 269.0
BYD3_k127_6300518_24 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000004691 231.0
BYD3_k127_6300518_25 membrane transporter protein K07090 - - 0.0000000000000000000000000000000000000000000000000000000000000000006124 236.0
BYD3_k127_6300518_26 Protein of unknown function (DUF938) - - - 0.00000000000000000000000000000000000000000000000000000000000000001603 231.0
BYD3_k127_6300518_27 3-demethylubiquinone-9 3-O-methyltransferase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000005267 229.0
BYD3_k127_6300518_28 TonB-dependent receptor - - - 0.00000000000000000000000000000000000000000000000000000000000001179 246.0
BYD3_k127_6300518_29 ECF sigma factor - - - 0.0000000000000000000000000000000000000000000000000000000000009443 215.0
BYD3_k127_6300518_3 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002244 614.0
BYD3_k127_6300518_30 Peptidase family M23 K21472 - - 0.0000000000000000000000000000000000000000000000000000006964 203.0
BYD3_k127_6300518_31 TonB-dependent receptor - - - 0.000000000000000000000000000000000000000000000000000008072 217.0
BYD3_k127_6300518_32 Sigma-70 region 2 K03088 - - 0.00000000000000000000000000000000000000000000000000001252 196.0
BYD3_k127_6300518_33 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.00000000000000000000000000000000000000000000000000003452 200.0
BYD3_k127_6300518_34 Cytochrome c K03611 - - 0.0000000000000000000000000000000000000000000000004119 187.0
BYD3_k127_6300518_35 Zn-dependent hydrolases of the beta-lactamase fold - - - 0.0000000000000000000000000000000000000000005346 166.0
BYD3_k127_6300518_36 Peptidyl-prolyl cis-trans K01802,K03772 - 5.2.1.8 0.00000000000000000000000000000000000000003222 156.0
BYD3_k127_6300518_37 MgtC family K07507 - - 0.000000000000000000000000000000000002553 141.0
BYD3_k127_6300518_38 Protein of unknown function (DUF3300) - - - 0.000000000000000000000000000000000003743 154.0
BYD3_k127_6300518_39 GDSL-like lipase acylhydrolase domain protein - - - 0.000000000000000000000000000000004535 141.0
BYD3_k127_6300518_4 signal transduction protein containing a membrane domain an EAL and a GGDEF domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001986 576.0
BYD3_k127_6300518_40 TIR domain - - - 0.000000000000000000000000000001582 137.0
BYD3_k127_6300518_41 Periplasmic or secreted lipoprotein - - - 0.000000000000000000000000000007588 128.0
BYD3_k127_6300518_42 - - - - 0.00000000000000000000000000002888 128.0
BYD3_k127_6300518_43 - - - - 0.00000000000000000000000000008277 128.0
BYD3_k127_6300518_44 YtkA-like - - - 0.0000000000000000000000000001978 120.0
BYD3_k127_6300518_45 - - - - 0.000000000000000000000000001026 120.0
BYD3_k127_6300518_46 deoxyhypusine monooxygenase activity - - - 0.00000000000000000000000001552 126.0
BYD3_k127_6300518_47 Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.00000000000000000000000008083 112.0
BYD3_k127_6300518_48 - - - - 0.0000000000000000000000001969 115.0
BYD3_k127_6300518_49 - - - - 0.0000000000000000000000002215 113.0
BYD3_k127_6300518_5 COG0457 FOG TPR repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003866 515.0
BYD3_k127_6300518_50 - - - - 0.000000000000000000000001849 109.0
BYD3_k127_6300518_51 Belongs to the UPF0337 (CsbD) family - - - 0.000000000000000000002144 95.0
BYD3_k127_6300518_52 Acetyltransferase (GNAT) domain - - - 0.000000000000000009393 89.0
BYD3_k127_6300518_53 PFAM IS1 transposase - - - 0.00000000000000001459 86.0
BYD3_k127_6300518_54 His Kinase A (phosphoacceptor) domain K02482 - 2.7.13.3 0.00000000000000008065 90.0
BYD3_k127_6300518_55 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000008951 87.0
BYD3_k127_6300518_56 Rhodanese domain protein - - - 0.0000000000006311 71.0
BYD3_k127_6300518_57 antisigma factor binding - - - 0.0000000000007631 78.0
BYD3_k127_6300518_58 Cytochrome c - - - 0.0000000000009374 78.0
BYD3_k127_6300518_59 Beta-lactamase superfamily domain - - - 0.00000000004396 68.0
BYD3_k127_6300518_6 Inactivates the type B streptogramin antibiotics by linearizing the lactone ring at the ester linkage, generating a free phenylglycine carboxylate and converting the threonyl moiety into 2-amino-butenoic acid K18235 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007364 487.0
BYD3_k127_6300518_60 - - - - 0.0000000005957 70.0
BYD3_k127_6300518_61 Bacterial regulatory protein, Fis family K13599 - - 0.000000001534 67.0
BYD3_k127_6300518_63 Protein of unknown function, DUF481 K07283 - - 0.00000002017 64.0
BYD3_k127_6300518_64 PFAM GCN5-related N-acetyltransferase K03790 - 2.3.1.128 0.000000324 60.0
BYD3_k127_6300518_65 Caspase domain - - - 0.0001162 54.0
BYD3_k127_6300518_7 two component, sigma54 specific, transcriptional regulator, Fis family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001145 404.0
BYD3_k127_6300518_8 electron transfer activity K00428 - 1.11.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008293 381.0
BYD3_k127_6300518_9 FAD dependent oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007527 379.0
BYD3_k127_6336029_0 PFAM SAICAR synthetase K01923,K13713 - 6.3.2.6,6.3.4.13 0.000000000000000000000000000000000000000000000000000000000000000338 224.0
BYD3_k127_6336029_1 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 0.000000000000000000000000000000000000000000000000000000000000001893 219.0
BYD3_k127_6336029_2 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 - - 0.00000000000000000000000000000000000002411 145.0
BYD3_k127_6336029_3 Bacterial regulatory protein, Fis family - - - 0.00000001746 63.0
BYD3_k127_64533_0 Glycosyltransferase family 87 K13671 - - 0.00000000003908 73.0
BYD3_k127_6506646_0 lysine biosynthetic process via aminoadipic acid - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001936 304.0
BYD3_k127_6506646_1 - - - - 0.000000000000000000000000001477 119.0
BYD3_k127_6512548_0 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005687 605.0
BYD3_k127_6512548_1 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001212 567.0
BYD3_k127_6512548_10 PFAM Cytochrome C biogenesis protein transmembrane region K06196 - - 0.000000253 64.0
BYD3_k127_6512548_11 40-residue YVTN family beta-propeller repeat - - - 0.0002519 54.0
BYD3_k127_6512548_2 PQQ-like domain K05889 - 1.1.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001131 502.0
BYD3_k127_6512548_3 Carboxypeptidase regulatory-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002359 392.0
BYD3_k127_6512548_4 Carboxypeptidase regulatory-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001944 389.0
BYD3_k127_6512548_5 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001351 377.0
BYD3_k127_6512548_6 Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis K01042 GO:0003674,GO:0003824,GO:0004125,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009059,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016070,GO:0016259,GO:0016260,GO:0016740,GO:0016785,GO:0018130,GO:0019438,GO:0019752,GO:0019842,GO:0030170,GO:0032774,GO:0034641,GO:0034654,GO:0034660,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0048037,GO:0050662,GO:0070279,GO:0071704,GO:0090304,GO:0097056,GO:0097159,GO:0140098,GO:0140101,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.9.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000125 315.0
BYD3_k127_6512548_7 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001869 307.0
BYD3_k127_6512548_8 SUF system FeS assembly protein K04488 - - 0.00000000000000000000000000000000000000000008194 169.0
BYD3_k127_6512548_9 Carboxypeptidase regulatory-like domain - - - 0.000000000000000001185 97.0
BYD3_k127_6564844_0 AI-2E family transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000406 329.0
BYD3_k127_6564844_1 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000007849 146.0
BYD3_k127_6564844_2 L-lysine 6-monooxygenase (NADPH-requiring) K07222 - - 0.0000000007944 60.0
BYD3_k127_6737529_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 - 2.7.7.6 0.0 1560.0
BYD3_k127_6737529_1 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 1.251e-318 990.0
BYD3_k127_6737529_10 Glucose / Sorbosone dehydrogenase K21430 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002062 391.0
BYD3_k127_6737529_11 H( )-stimulated, divalent metal cation uptake system - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003048 382.0
BYD3_k127_6737529_12 Phosphoenolpyruvate phosphomutase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001665 334.0
BYD3_k127_6737529_13 4Fe-4S dicluster domain K00184 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006204 324.0
BYD3_k127_6737529_14 Putative cyclase K07130 GO:0003674,GO:0003824,GO:0004061,GO:0006082,GO:0006520,GO:0006568,GO:0006569,GO:0006576,GO:0006586,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009072,GO:0009074,GO:0009308,GO:0009310,GO:0009987,GO:0016054,GO:0016787,GO:0016810,GO:0016811,GO:0019439,GO:0019441,GO:0019752,GO:0032787,GO:0034641,GO:0042180,GO:0042402,GO:0042430,GO:0042436,GO:0042537,GO:0043420,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0046218,GO:0046395,GO:0046483,GO:0046700,GO:0070189,GO:0071704,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 3.5.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009574 323.0
BYD3_k127_6737529_15 Amidohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008021 312.0
BYD3_k127_6737529_16 extracellular solute-binding protein, family 1 K22003 - 5.3.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002377 300.0
BYD3_k127_6737529_17 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000009458 268.0
BYD3_k127_6737529_18 epimerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003725 252.0
BYD3_k127_6737529_2 Dehydrogenase K00114 - 1.1.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007517 623.0
BYD3_k127_6737529_20 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000006376 226.0
BYD3_k127_6737529_21 - - - - 0.0000000000000000000000000000000000000000000000000000000000000001172 233.0
BYD3_k127_6737529_22 PFAM Appr-1-p processing domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000002052 225.0
BYD3_k127_6737529_23 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 - - 0.000000000000000000000000000000000000000000000000000000000000006321 220.0
BYD3_k127_6737529_24 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000004858 222.0
BYD3_k127_6737529_26 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03564 - 1.11.1.15 0.00000000000000000000000000000000000000000000000000002575 191.0
BYD3_k127_6737529_27 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K02479 - - 0.000000000000000000000000000000000000000000000000001379 189.0
BYD3_k127_6737529_28 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) - - - 0.00000000000000000000000000000000000000000000000004762 194.0
BYD3_k127_6737529_29 Domain of unknown function (DUF4159) - - - 0.00000000000000000000000000000000000000000000000007732 188.0
BYD3_k127_6737529_3 MmgE/PrpD family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001509 600.0
BYD3_k127_6737529_30 - - - - 0.0000000000000000000000000000000000000000000000001181 184.0
BYD3_k127_6737529_31 Domain of unknown function (DUF4159) - - - 0.000000000000000000000000000000000000000000000001343 183.0
BYD3_k127_6737529_32 NAD-dependent epimerase dehydratase - - - 0.000000000000000000000000000000000000000000000002501 180.0
BYD3_k127_6737529_33 Putative glycolipid-binding K09957 - - 0.000000000000000000000000000000000000000000004675 170.0
BYD3_k127_6737529_34 MOSC domain - - - 0.00000000000000000000000000000000000000000003986 177.0
BYD3_k127_6737529_35 Domain of unknown function (DUF4159) - - - 0.00000000000000000000000000000000000000000005645 174.0
BYD3_k127_6737529_36 - - - - 0.000000000000000000000000000000000000000001715 167.0
BYD3_k127_6737529_37 COGs COG1629 Outer membrane receptor protein mostly Fe transport K02014 - - 0.00000000000000000000000000000000004241 156.0
BYD3_k127_6737529_38 Cytochrome c7 and related cytochrome c - - - 0.0000000000000000000000000000000112 134.0
BYD3_k127_6737529_39 SWI complex, BAF60b domains - - - 0.0000000000000000000000000000003505 126.0
BYD3_k127_6737529_4 sulfite oxidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007182 569.0
BYD3_k127_6737529_40 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.000000000000000000000000000002423 137.0
BYD3_k127_6737529_41 - - - - 0.00000000000000000000000000008398 127.0
BYD3_k127_6737529_42 Cupin domain - - - 0.000000000000000000004047 99.0
BYD3_k127_6737529_43 PFAM Isoprenylcysteine carboxyl methyltransferase - - - 0.00000000000000000003811 98.0
BYD3_k127_6737529_45 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.0000000000000000004157 87.0
BYD3_k127_6737529_46 - - - - 0.00000000000000003237 82.0
BYD3_k127_6737529_47 - - - - 0.000000000000005239 86.0
BYD3_k127_6737529_48 Protein of unknown function (DUF3341) - - - 0.000000000002581 75.0
BYD3_k127_6737529_49 Class II Aldolase and Adducin N-terminal domain K18256 - 4.1.1.69 0.00000000002515 76.0
BYD3_k127_6737529_5 AMP-binding enzyme C-terminal domain K00666,K18660 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002821 559.0
BYD3_k127_6737529_50 cytochrome c K00405,K07245 - - 0.0000000006212 68.0
BYD3_k127_6737529_51 Domain of unknown function (DUF4440) - - - 0.000000001861 68.0
BYD3_k127_6737529_52 Amidohydrolase family - - - 0.000000004514 64.0
BYD3_k127_6737529_53 Sulfatase - - - 0.00000001219 66.0
BYD3_k127_6737529_54 glyoxalase bleomycin resistance protein dioxygenase K05606 - 5.1.99.1 0.0000002485 59.0
BYD3_k127_6737529_55 Endonuclease/Exonuclease/phosphatase family - - - 0.000001204 59.0
BYD3_k127_6737529_56 PFAM PEGA domain - - - 0.0000201 55.0
BYD3_k127_6737529_57 Amidohydrolase family - - - 0.0003695 46.0
BYD3_k127_6737529_6 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009198 527.0
BYD3_k127_6737529_7 Molybdopterin oxidoreductase Fe4S4 domain K08357 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001479 470.0
BYD3_k127_6737529_8 Polysulphide reductase, NrfD - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005435 421.0
BYD3_k127_6737529_9 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001177 414.0
BYD3_k127_7022981_0 DNA topological change K03168 - 5.99.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007664 611.0
BYD3_k127_7022981_1 Protein of unknown function (DUF1501) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003632 544.0
BYD3_k127_7022981_10 PFAM Methylene-tetrahydromethanopterin dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004488 282.0
BYD3_k127_7022981_11 transferase activity, transferring glycosyl groups K06984 - 2.4.2.54 0.0000000000000000000000000000000000000000000000000000000000000000000000000003079 269.0
BYD3_k127_7022981_12 Belongs to the RimK family K05827,K05844 - 6.3.2.43 0.000000000000000000000000000000000000000000000000000000000000000000000000004943 262.0
BYD3_k127_7022981_13 Dehydrogenases with different specificities (Related to short-chain alcohol dehydrogenases) K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000001299 248.0
BYD3_k127_7022981_14 Met-10+ like-protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000001174 238.0
BYD3_k127_7022981_15 Peptidase C26 K01658 - 4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000176 238.0
BYD3_k127_7022981_16 formaldehyde-activating enzyme K10713 - 4.2.1.147 0.0000000000000000000000000000000000000000000000000000000000000000004914 232.0
BYD3_k127_7022981_17 ATP:dephospho-CoA triphosphoribosyl transferase K05966 - 2.4.2.52 0.000000000000000000000000000000000000000000000000000000000000000002103 246.0
BYD3_k127_7022981_18 response to abiotic stimulus K06867 - - 0.00000000000000000000000000000000000000000000000000000000000000001139 246.0
BYD3_k127_7022981_19 Pfam ATP-grasp domain K06914 - 6.3.4.24 0.0000000000000000000000000000000000000000000000000000000000000000287 237.0
BYD3_k127_7022981_2 Protein of unknown function (DUF1549) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001182 502.0
BYD3_k127_7022981_20 Hydantoinase/oxoprolinase K07072 - 2.5.1.131 0.000000000000000000000000000000000000000000000000000000000000001 234.0
BYD3_k127_7022981_21 ATP-grasp domain K01499,K06913 - 3.5.4.27 0.00000000000000000000000000000000000000000000000000000000000000983 230.0
BYD3_k127_7022981_22 CO2 hydration protein (ChpXY) - - - 0.00000000000000000000000000000000000000000000000000000000000003237 228.0
BYD3_k127_7022981_23 Protein of unknown function (DUF447) K09154 - - 0.0000000000000000000000000000000000000000000000002924 184.0
BYD3_k127_7022981_24 Pterin 4 alpha carbinolamine dehydratase K01724 - 4.2.1.96 0.00000000000000000000000000000000000000000000004745 173.0
BYD3_k127_7022981_25 - - - - 0.0000000000000000000000000000000000000000000003619 182.0
BYD3_k127_7022981_26 Branched-chain amino acid aminotransferase 4-amino-4-deoxychorismate lyase K00826 - 2.6.1.42 0.000000000000000000000000000000000000000002034 169.0
BYD3_k127_7022981_27 6-pyruvoyl tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.00000000000000000000000000000000000001254 154.0
BYD3_k127_7022981_28 Belongs to the HisA HisF family K01814 - 5.3.1.16 0.00000000000000000000000000002268 128.0
BYD3_k127_7022981_29 lyase activity K01633,K09733 - 1.13.11.81,4.1.2.25,4.2.3.153,5.1.99.8 0.0000000000000000000000000001197 124.0
BYD3_k127_7022981_3 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 - 2.5.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000228 467.0
BYD3_k127_7022981_30 - K01633,K07144 - 1.13.11.81,2.7.4.31,4.1.2.25,5.1.99.8 0.0000000000000000000000000003268 121.0
BYD3_k127_7022981_31 - - - - 0.00000000000000000000009245 108.0
BYD3_k127_7022981_32 Pfam Secreted repeat of - - - 0.0000000000000000005295 100.0
BYD3_k127_7022981_34 - - - - 0.0000000000000003628 89.0
BYD3_k127_7022981_35 - - - - 0.000000000000001539 81.0
BYD3_k127_7022981_36 Lactoylglutathione lyase K01759,K15772 - 4.4.1.5 0.00007383 51.0
BYD3_k127_7022981_4 component I K01665 - 2.6.1.85 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006951 424.0
BYD3_k127_7022981_5 Catalyzes the transfer of a formyl group from 5-formyl tetrahydromethanopterin (5-formyl-H(4)MPT) to methanofuran (MFR) so as to produce formylmethanofuran (formyl-MFR) and tetrahydromethanopterin (H(4)MPT) K00672 - 2.3.1.101 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002056 353.0
BYD3_k127_7022981_6 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006563 366.0
BYD3_k127_7022981_7 Protein of unknown function (DUF1552) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002281 340.0
BYD3_k127_7022981_8 Catalyzes the hydrolysis of methenyl-H(4)MPT( ) to 5- formyl-H(4)MPT K01499 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0008152,GO:0009987,GO:0015947,GO:0016787,GO:0016810,GO:0016814,GO:0018759,GO:0019238,GO:0043446,GO:0044237,GO:0044424,GO:0044464,GO:0071704 3.5.4.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001139 331.0
BYD3_k127_7022981_9 amine dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000126 321.0
BYD3_k127_7168344_0 Xylose isomerase domain protein TIM barrel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004369 269.0
BYD3_k127_7168344_1 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.00000000004626 76.0
BYD3_k127_7168344_2 PBS lyase K22221 - - 0.0005324 51.0
BYD3_k127_7171910_0 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.0000000000000000000000000000000000000000000000000000000000000000003403 237.0
BYD3_k127_7171910_1 Major facilitator Superfamily K08223 - - 0.00000000000000000000000000000000000000000000000000000000001642 215.0
BYD3_k127_7248313_0 Oxidoreductase molybdopterin binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001052 274.0
BYD3_k127_7248313_1 NHL repeat - - - 0.000000000000000000000000000000000000000000000002533 187.0
BYD3_k127_7248313_2 COG3258 Cytochrome c K19713 - 1.8.2.2 0.000000000000000000000000000000000000000000000002965 190.0
BYD3_k127_7248313_3 ECF sigma factor K03088 - - 0.0000000000000000000000000000002013 130.0
BYD3_k127_7248313_4 - - - - 0.00000000000000001983 91.0
BYD3_k127_7248313_5 - - - - 0.000000000001572 76.0
BYD3_k127_7288982_0 alpha amylase catalytic K01182,K05343 - 3.2.1.1,3.2.1.10,5.4.99.16 0.0 1245.0
BYD3_k127_7288982_1 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) K01214 - 3.2.1.68 0.0 1031.0
BYD3_k127_7288982_10 ABC transporter, transmembrane K18890 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002008 608.0
BYD3_k127_7288982_100 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116,K03117,K03646 - - 0.0000000000000003898 82.0
BYD3_k127_7288982_101 phosphoesterase RecJ domain protein K06881 - 3.1.13.3,3.1.3.7 0.000000000000001586 79.0
BYD3_k127_7288982_102 - - - - 0.00000000000001263 82.0
BYD3_k127_7288982_103 - - - - 0.0000000000008078 72.0
BYD3_k127_7288982_104 - - - - 0.000000000002258 77.0
BYD3_k127_7288982_105 - - - - 0.00000000007444 70.0
BYD3_k127_7288982_106 Lipocalin-like domain - - - 0.00000000008814 69.0
BYD3_k127_7288982_107 membrane - - - 0.0000000004744 66.0
BYD3_k127_7288982_108 bacterial OsmY and nodulation domain K04065 GO:0005575,GO:0005623,GO:0006457,GO:0006950,GO:0006970,GO:0006972,GO:0008150,GO:0009628,GO:0009987,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0044464,GO:0050896,GO:0061077 - 0.00000000049 66.0
BYD3_k127_7288982_109 - - - - 0.0000000009289 61.0
BYD3_k127_7288982_11 ABC transporter, transmembrane K18889 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001194 564.0
BYD3_k127_7288982_111 A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD - - - 0.000000003315 59.0
BYD3_k127_7288982_112 Belongs to the ParB family K03497 - - 0.000000004522 69.0
BYD3_k127_7288982_113 Acetyltransferase (GNAT) domain K03790 - 2.3.1.128 0.000000004675 66.0
BYD3_k127_7288982_115 PFAM cytochrome c oxidase subunit II K00376 - 1.7.2.4 0.00000003926 66.0
BYD3_k127_7288982_116 HTH-like domain K07497 - - 0.0000001244 54.0
BYD3_k127_7288982_118 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.000002738 58.0
BYD3_k127_7288982_12 signal transduction protein containing a membrane domain an EAL and a GGDEF domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001274 575.0
BYD3_k127_7288982_120 - - - - 0.00001114 53.0
BYD3_k127_7288982_122 pilus assembly protein PilW - - - 0.00005545 54.0
BYD3_k127_7288982_123 UvrD-like helicase C-terminal domain - - - 0.0001373 48.0
BYD3_k127_7288982_124 Prokaryotic N-terminal methylation motif K08084 - - 0.0003058 49.0
BYD3_k127_7288982_13 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001615 508.0
BYD3_k127_7288982_14 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family K03309 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006484 463.0
BYD3_k127_7288982_15 MmgE PrpD family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001262 456.0
BYD3_k127_7288982_16 Bacterial regulatory protein, Fis family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001678 446.0
BYD3_k127_7288982_17 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002261 438.0
BYD3_k127_7288982_18 Participates in both transcription termination and antitermination K02600 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003803 434.0
BYD3_k127_7288982_19 family UPF0324 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003889 432.0
BYD3_k127_7288982_2 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 6.782e-261 822.0
BYD3_k127_7288982_20 Pantothenic acid kinase K00867 GO:0003674,GO:0003824,GO:0004594,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.1.33 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006866 424.0
BYD3_k127_7288982_21 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009043 429.0
BYD3_k127_7288982_22 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002052 422.0
BYD3_k127_7288982_23 Putative cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001003 411.0
BYD3_k127_7288982_24 Manganese containing catalase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001353 410.0
BYD3_k127_7288982_25 Required for chromosome condensation and partitioning K03529 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006926 432.0
BYD3_k127_7288982_26 DNA polymerase Ligase (LigD) K01971 - 6.5.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001315 409.0
BYD3_k127_7288982_27 lysine biosynthetic process via aminoadipic acid - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003566 404.0
BYD3_k127_7288982_28 Dienelactone hydrolase family K01061 - 3.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002153 384.0
BYD3_k127_7288982_29 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002467 373.0
BYD3_k127_7288982_3 Carbohydrate phosphorylase K00688 - 2.4.1.1 1.317e-256 810.0
BYD3_k127_7288982_30 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003811 368.0
BYD3_k127_7288982_31 PFAM peptidase M24 K01262 - 3.4.11.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006096 372.0
BYD3_k127_7288982_32 Bacterial extracellular solute-binding protein, family 7 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001477 342.0
BYD3_k127_7288982_33 serine-type endopeptidase activity K04771 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005575,GO:0005623,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0016787,GO:0017171,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043170,GO:0044238,GO:0044464,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.21.107 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004406 340.0
BYD3_k127_7288982_34 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 GO:0003674,GO:0003824,GO:0004518,GO:0004540,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006401,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016075,GO:0016787,GO:0016788,GO:0019439,GO:0022613,GO:0031123,GO:0031125,GO:0034470,GO:0034641,GO:0034655,GO:0034660,GO:0034661,GO:0042254,GO:0043170,GO:0043628,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0140098,GO:1901360,GO:1901361,GO:1901575 2.7.7.56 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001859 321.0
BYD3_k127_7288982_35 TonB dependent receptor K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002283 333.0
BYD3_k127_7288982_36 Sulfite exporter TauE/SafE K07090 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002363 306.0
BYD3_k127_7288982_37 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735,K13829 - 2.7.1.71,4.2.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001682 298.0
BYD3_k127_7288982_38 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0005488,GO:0097159,GO:1901363 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006672 292.0
BYD3_k127_7288982_39 Citrate transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000631 297.0
BYD3_k127_7288982_4 Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1- 4)- glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB K16147 - 2.4.99.16 1.464e-233 740.0
BYD3_k127_7288982_40 metal-dependent hydrolase with the TIM-barrel fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004943 302.0
BYD3_k127_7288982_41 Transcriptional regulatory protein, C terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005987 275.0
BYD3_k127_7288982_42 PFAM peptidase M48 Ste24p K06013 - 3.4.24.84 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002796 281.0
BYD3_k127_7288982_43 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001966 288.0
BYD3_k127_7288982_44 beta' subunit K01754 - 4.3.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000001044 268.0
BYD3_k127_7288982_45 Virulence factor BrkB K07058 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000007448 264.0
BYD3_k127_7288982_46 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000009711 254.0
BYD3_k127_7288982_47 SMART tyrosine protein kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000143 263.0
BYD3_k127_7288982_48 Uncharacterized conserved protein (COG2071) K09166 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001213 248.0
BYD3_k127_7288982_49 Cytochrome c - - - 0.000000000000000000000000000000000000000000000000000000000000000000001734 249.0
BYD3_k127_7288982_5 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 4.827e-212 690.0
BYD3_k127_7288982_50 imidazolonepropionase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000005551 252.0
BYD3_k127_7288982_51 MASE1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000001964 249.0
BYD3_k127_7288982_52 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000002235 241.0
BYD3_k127_7288982_53 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000105 243.0
BYD3_k127_7288982_54 Transglycosylase SLT domain K08309 - - 0.000000000000000000000000000000000000000000000000000000000000000004774 252.0
BYD3_k127_7288982_55 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000003955 231.0
BYD3_k127_7288982_56 Uncharacterized protein conserved in bacteria (DUF2236) - - - 0.00000000000000000000000000000000000000000000000000000000001015 216.0
BYD3_k127_7288982_57 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.000000000000000000000000000000000000000000000000000000007687 207.0
BYD3_k127_7288982_58 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 - 5.4.99.25 0.000000000000000000000000000000000000000000000000000000009547 210.0
BYD3_k127_7288982_59 Phosphotransferase enzyme family K07102 - 2.7.1.221 0.00000000000000000000000000000000000000000000000000000002222 211.0
BYD3_k127_7288982_6 Carboxypeptidase regulatory-like domain - - - 6.412e-201 665.0
BYD3_k127_7288982_60 phosphinothricin N-acetyltransferase activity K03830 - - 0.00000000000000000000000000000000000000000000000000006327 190.0
BYD3_k127_7288982_61 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.0000000000000000000000000000000000000000000000000004148 197.0
BYD3_k127_7288982_62 SnoaL-like polyketide cyclase - - - 0.000000000000000000000000000000000000000000000000001133 186.0
BYD3_k127_7288982_63 TonB-dependent receptor K02014 - - 0.00000000000000000000000000000000000000000000000000636 205.0
BYD3_k127_7288982_64 - - - - 0.00000000000000000000000000000000000000000000007101 179.0
BYD3_k127_7288982_65 Bacterial extracellular solute-binding protein K02020,K22003 - 5.3.3.7 0.00000000000000000000000000000000000000000004892 169.0
BYD3_k127_7288982_66 Domain of unknown function (DUF892) - - - 0.0000000000000000000000000000000000000000001396 168.0
BYD3_k127_7288982_67 Polysaccharide export protein K01991,K20988 - - 0.000000000000000000000000000000000000000006331 166.0
BYD3_k127_7288982_68 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 - 3.6.1.66 0.000000000000000000000000000000000000000009649 164.0
BYD3_k127_7288982_69 DHH family K06881 - 3.1.13.3,3.1.3.7 0.0000000000000000000000000000000000000001924 162.0
BYD3_k127_7288982_7 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 6.1.1.15 1.282e-200 636.0
BYD3_k127_7288982_70 amine dehydrogenase activity - - - 0.0000000000000000000000000000000000000004128 164.0
BYD3_k127_7288982_71 Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate K01841 - 5.4.2.9 0.00000000000000000000000000000000000002109 156.0
BYD3_k127_7288982_72 Phosphoglycerate mutase - - - 0.0000000000000000000000000000000000001717 149.0
BYD3_k127_7288982_73 Methyltransferase type 12 - - - 0.0000000000000000000000000000000000002525 151.0
BYD3_k127_7288982_74 Histidine phosphatase superfamily (branch 1) - - - 0.000000000000000000000000000000000000268 153.0
BYD3_k127_7288982_75 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA K02956 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000002828 137.0
BYD3_k127_7288982_76 Xylose isomerase-like TIM barrel - - - 0.0000000000000000000000000000000007493 142.0
BYD3_k127_7288982_77 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000000000000000000000000000000348 133.0
BYD3_k127_7288982_78 Ami_3 K01448 - 3.5.1.28 0.000000000000000000000000000000004971 145.0
BYD3_k127_7288982_79 protein conserved in bacteria - - - 0.00000000000000000000000000000002014 132.0
BYD3_k127_7288982_8 PFAM tRNA synthetase, class II (D, K and N) K01893 - 6.1.1.22 2.636e-194 614.0
BYD3_k127_7288982_80 - - - - 0.000000000000000000000000000002392 137.0
BYD3_k127_7288982_81 TIR domain - - - 0.000000000000000000000000000003646 137.0
BYD3_k127_7288982_82 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.000000000000000000000000000004355 124.0
BYD3_k127_7288982_83 COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon K00966,K16881 GO:0000166,GO:0001882,GO:0001884,GO:0002134,GO:0003674,GO:0003824,GO:0003983,GO:0005488,GO:0006011,GO:0006139,GO:0006725,GO:0006793,GO:0006807,GO:0008150,GO:0008152,GO:0009225,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0019103,GO:0032549,GO:0032551,GO:0032553,GO:0032557,GO:0034641,GO:0036094,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0051748,GO:0055086,GO:0070569,GO:0071704,GO:0097159,GO:0097367,GO:1901135,GO:1901265,GO:1901360,GO:1901363 2.7.7.13,5.4.2.8 0.00000000000000000000000000001724 130.0
BYD3_k127_7288982_84 Required for maturation of 30S ribosomal subunits K09748 GO:0000028,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000003355 123.0
BYD3_k127_7288982_85 PFAM Phosphoribosyl transferase domain K07100 - - 0.00000000000000000000000000006053 118.0
BYD3_k127_7288982_86 PFAM RNP-1 like RNA-binding protein - - - 0.00000000000000000000000000007593 119.0
BYD3_k127_7288982_87 Sporulation and spore germination - - - 0.0000000000000000000000000003517 123.0
BYD3_k127_7288982_88 oxidoreductase activity - - - 0.000000000000000000000000008949 128.0
BYD3_k127_7288982_89 Protein of unknown function (DUF1622) - - - 0.0000000000000000000000001023 111.0
BYD3_k127_7288982_9 repeat protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001322 613.0
BYD3_k127_7288982_90 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000001118 98.0
BYD3_k127_7288982_91 - - - - 0.000000000000000000001532 106.0
BYD3_k127_7288982_92 CYTH K05873 - 4.6.1.1 0.000000000000000000004927 101.0
BYD3_k127_7288982_93 Cupin 2, conserved barrel domain protein - - - 0.00000000000000000001275 94.0
BYD3_k127_7288982_95 PFAM GGDEF domain containing protein K13590 - 2.7.7.65 0.0000000000000000003246 98.0
BYD3_k127_7288982_96 Cold shock protein domain - - - 0.000000000000000001861 89.0
BYD3_k127_7288982_97 Cold shock protein domain - - - 0.000000000000000002329 89.0
BYD3_k127_7288982_98 Carboxypeptidase regulatory-like domain - - - 0.00000000000000001139 87.0
BYD3_k127_7288982_99 membrane - - - 0.00000000000000009756 88.0
BYD3_k127_7292756_0 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007 - 2.7.9.2 1.904e-231 727.0
BYD3_k127_7316887_0 Sulfatase K01130 - 3.1.6.1 0.0 1401.0
BYD3_k127_7316887_1 Bacterial protein of unknown function (DUF853) K06915 - - 1.128e-225 708.0
BYD3_k127_7316887_10 Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain K17247 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010181,GO:0016020,GO:0016021,GO:0016491,GO:0016679,GO:0019538,GO:0020037,GO:0030091,GO:0031224,GO:0031226,GO:0032553,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044425,GO:0044459,GO:0044464,GO:0046906,GO:0048037,GO:0050662,GO:0055114,GO:0071704,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1901564 - 0.00000000000000000000000000000000000000000000000000003979 201.0
BYD3_k127_7316887_11 Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000001964 180.0
BYD3_k127_7316887_12 Large-conductance mechanosensitive channel, MscL K03282 GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006884,GO:0008150,GO:0008361,GO:0008381,GO:0009987,GO:0009992,GO:0015267,GO:0016020,GO:0016021,GO:0016043,GO:0019725,GO:0022803,GO:0022836,GO:0022857,GO:0030104,GO:0031224,GO:0032535,GO:0042592,GO:0044425,GO:0048878,GO:0051179,GO:0051234,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0071840,GO:0090066 - 0.0000000000000000000000000000000000000000000004908 170.0
BYD3_k127_7316887_13 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000001662 184.0
BYD3_k127_7316887_14 amine dehydrogenase activity - - - 0.00000000000000000000000000000000000000000894 169.0
BYD3_k127_7316887_15 Polysaccharide biosynthesis/export protein K01991 - - 0.0000000000000000000000000000000000000009004 158.0
BYD3_k127_7316887_16 lactoylglutathione lyase activity - - - 0.00000000000000000000000000000000000007592 148.0
BYD3_k127_7316887_17 Capsular exopolysaccharide family K08252 - 2.7.10.1 0.0000000000000000000000000000000000002733 149.0
BYD3_k127_7316887_18 Methyltransferase domain - - - 0.000000000000000000000000000000005909 136.0
BYD3_k127_7316887_19 methyltransferase activity - - - 0.0000000000000000000000000000001472 130.0
BYD3_k127_7316887_2 Bacterial regulatory protein, Fis family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004761 454.0
BYD3_k127_7316887_20 Protein conserved in bacteria K09931 - - 0.00000000000000000000000000001286 128.0
BYD3_k127_7316887_21 cheY-homologous receiver domain - - - 0.00000000000000000000000000004622 122.0
BYD3_k127_7316887_22 Belongs to the anti-sigma-factor antagonist family K04749 - - 0.00000000000000000000000000007695 121.0
BYD3_k127_7316887_23 Transglycosylase associated protein - - - 0.00000000000000000000000003367 109.0
BYD3_k127_7316887_24 amidohydrolase - - - 0.0000000000000000000000132 116.0
BYD3_k127_7316887_25 helix_turn_helix, Lux Regulon K14987 - - 0.00000000000000000006071 94.0
BYD3_k127_7316887_26 Polysaccharide chain length determinant protein - - - 0.0000000000000000001723 103.0
BYD3_k127_7316887_27 Dodecin K09165 - - 0.0000000000000000008476 87.0
BYD3_k127_7316887_28 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000008231 86.0
BYD3_k127_7316887_29 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain - - - 0.00000000000001083 86.0
BYD3_k127_7316887_3 Bacterial regulatory protein, Fis family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008451 449.0
BYD3_k127_7316887_30 Transcriptional regulatory protein, C terminal - - - 0.00000000001502 74.0
BYD3_k127_7316887_31 Protein of unknown function (DUF1565) - - - 0.00000000003004 76.0
BYD3_k127_7316887_32 multi-organism process K03195 - - 0.00000000005717 73.0
BYD3_k127_7316887_33 Acetyltransferase (GNAT) domain - - - 0.0000000002963 72.0
BYD3_k127_7316887_34 - - - - 0.00000004592 62.0
BYD3_k127_7316887_36 O-antigen ligase like membrane protein - - - 0.0000004417 62.0
BYD3_k127_7316887_37 PFAM Glyoxalase bleomycin resistance protein dioxygenase K05606 - 5.1.99.1 0.0000009396 57.0
BYD3_k127_7316887_38 Domain of unknown function (DUF4382) - - - 0.00006979 53.0
BYD3_k127_7316887_39 transcriptional regulator - - - 0.0001686 48.0
BYD3_k127_7316887_4 Oxidoreductase molybdopterin binding domain K07147 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003151 422.0
BYD3_k127_7316887_5 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007373 362.0
BYD3_k127_7316887_6 RibD C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001138 340.0
BYD3_k127_7316887_7 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002382 254.0
BYD3_k127_7316887_8 PAS domain - - - 0.000000000000000000000000000000000000000000000000000000000000000006929 250.0
BYD3_k127_7316887_9 Inner membrane component of T3SS, cytoplasmic domain - - - 0.000000000000000000000000000000000000000000000000000000000003684 228.0
BYD3_k127_7376343_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 5.309e-261 818.0
BYD3_k127_7376343_1 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01534 - 3.6.3.3,3.6.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002045 573.0
BYD3_k127_7376343_10 peptidyl-lysine modification to peptidyl-hypusine - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001087 329.0
BYD3_k127_7376343_11 transcriptional regulatory protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000019 322.0
BYD3_k127_7376343_12 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00015 - 1.1.1.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006776 324.0
BYD3_k127_7376343_13 AI-2E family transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005334 319.0
BYD3_k127_7376343_14 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003963 297.0
BYD3_k127_7376343_15 ABC-type uncharacterized transport system K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002487 296.0
BYD3_k127_7376343_16 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) K06920 - 6.3.4.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000163 280.0
BYD3_k127_7376343_17 PFAM asparagine synthase K06864 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004134 282.0
BYD3_k127_7376343_18 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008614,GO:0008615,GO:0009058,GO:0009110,GO:0009987,GO:0016740,GO:0016769,GO:0017144,GO:0018130,GO:0019438,GO:0033856,GO:0034641,GO:0042364,GO:0042816,GO:0042819,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072524,GO:0072525,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 2.6.99.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000748 273.0
BYD3_k127_7376343_19 Pyridine nucleotide-disulphide oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001224 273.0
BYD3_k127_7376343_2 Bacterial periplasmic substrate-binding proteins K02029,K02030 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009754 545.0
BYD3_k127_7376343_20 Alanyl-tRNA synthetase K01872 - 6.1.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000009377 274.0
BYD3_k127_7376343_21 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K04068,K10026 - 1.97.1.4,4.3.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000008424 262.0
BYD3_k127_7376343_22 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796,K13941 - 2.5.1.15,2.7.6.3 0.00000000000000000000000000000000000000000000000000000000000000000000000002028 260.0
BYD3_k127_7376343_23 Protein of unknown function DUF72 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002519 261.0
BYD3_k127_7376343_24 Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria K18672 - 2.7.7.85 0.00000000000000000000000000000000000000000000000000000000000000000000000604 251.0
BYD3_k127_7376343_25 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000007939 251.0
BYD3_k127_7376343_26 PFAM Class II aldolase adducin K01628 - 4.1.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000006409 251.0
BYD3_k127_7376343_27 D-Ala-D-Ala carboxypeptidase 3 (S13) family K07259 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000003693 241.0
BYD3_k127_7376343_28 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.000000000000000000000000000000000000000000000000000000000002113 216.0
BYD3_k127_7376343_29 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.00000000000000000000000000000000000000000000000000000002154 210.0
BYD3_k127_7376343_3 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004443 460.0
BYD3_k127_7376343_30 - - - - 0.000000000000000000000000000000000000000000000000000000787 201.0
BYD3_k127_7376343_31 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000008523 196.0
BYD3_k127_7376343_32 AAA domain, putative AbiEii toxin, Type IV TA system K02028 - 3.6.3.21 0.00000000000000000000000000000000000000000000000001718 189.0
BYD3_k127_7376343_33 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 - 3.1.22.4 0.00000000000000000000000000000000000000000001244 170.0
BYD3_k127_7376343_34 histidine kinase A domain protein K02482 - 2.7.13.3 0.000000000000000000000000000000000000000001271 177.0
BYD3_k127_7376343_35 ethanolamine catabolic process K04027 - - 0.00000000000000000000000000000000000001182 146.0
BYD3_k127_7376343_36 Domain of unknown function (DUF4112) - - - 0.0000000000000000000000000000001812 129.0
BYD3_k127_7376343_37 - - - - 0.00000000000000000000000000001817 128.0
BYD3_k127_7376343_38 ethanolamine utilization protein EutN carboxysome structural protein Ccml K04028,K08697 - - 0.000000000000000000000000004223 112.0
BYD3_k127_7376343_39 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03768 - 5.2.1.8 0.000000000000000000000000009547 120.0
BYD3_k127_7376343_4 DNA polymerase LigD polymerase domain K01971 - 6.5.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004575 439.0
BYD3_k127_7376343_40 SMART Tetratricopeptide - - - 0.00000000000000000000003132 107.0
BYD3_k127_7376343_41 ethanolamine utilization protein EutN carboxysome structural protein Ccml K04028 GO:0006950,GO:0006974,GO:0008150,GO:0009987,GO:0033554,GO:0050896,GO:0051716 - 0.00000000000000000000746 94.0
BYD3_k127_7376343_42 Domain of unknown function (DUF4340) - - - 0.0000000000000000002254 102.0
BYD3_k127_7376343_43 Nodulation protein S (NodS) - - - 0.0000000000000000004851 98.0
BYD3_k127_7376343_44 Ethanolamine utilization protein EutN carboxysome structural protein Ccml K04028 - - 0.000000000000000002097 88.0
BYD3_k127_7376343_45 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.00000000000000005665 96.0
BYD3_k127_7376343_46 Methionine biosynthesis protein MetW - - - 0.0000000000000001187 90.0
BYD3_k127_7376343_47 - - - - 0.000000000000002709 86.0
BYD3_k127_7376343_48 PFAM YbbR family protein - - - 0.000000000557 70.0
BYD3_k127_7376343_5 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001032 437.0
BYD3_k127_7376343_50 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.000001919 58.0
BYD3_k127_7376343_51 COG2217 Cation transport ATPase K01533,K17686 - 3.6.3.4,3.6.3.54 0.0000186 52.0
BYD3_k127_7376343_52 Cytochrome c - - - 0.00003918 55.0
BYD3_k127_7376343_53 Alpha Beta K06889 - - 0.0001478 53.0
BYD3_k127_7376343_6 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008484 385.0
BYD3_k127_7376343_7 Belongs to the FPG family K10563 - 3.2.2.23,4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001742 376.0
BYD3_k127_7376343_8 AAA domain, putative AbiEii toxin, Type IV TA system - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002004 362.0
BYD3_k127_7376343_9 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003452 339.0
BYD3_k127_7502435_0 Carboxypeptidase regulatory-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005363 487.0
BYD3_k127_7508745_0 COG4584 Transposase and inactivated derivatives - - - 1.616e-253 785.0
BYD3_k127_7508745_1 IstB-like ATP binding protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001705 383.0
BYD3_k127_7575773_0 COG1680 Beta-lactamase class C and other penicillin binding proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000005643 258.0
BYD3_k127_7578155_0 xanthine dehydrogenase activity - - - 0.0 1116.0
BYD3_k127_7578155_1 PFAM amidohydrolase 2 K10220,K14333 - 4.1.1.46,4.2.1.83 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002753 610.0
BYD3_k127_7578155_10 Dehydrogenase K00020 - 1.1.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003619 407.0
BYD3_k127_7578155_11 aldo keto reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001849 406.0
BYD3_k127_7578155_12 Pyridine nucleotide-disulphide oxidoreductase K00362 - 1.7.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002323 402.0
BYD3_k127_7578155_13 Aldolase/RraA K10218 - 4.1.3.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001585 363.0
BYD3_k127_7578155_14 major facilitator superfamily MFS_1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007605 366.0
BYD3_k127_7578155_15 Cytochrome c - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004185 340.0
BYD3_k127_7578155_16 PAS fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006419 353.0
BYD3_k127_7578155_17 Similarity to COG0471 Di- and tricarboxylate transporters(Evalue K14445 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005061 326.0
BYD3_k127_7578155_18 ANTAR K01719 - 4.2.1.75 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000115 308.0
BYD3_k127_7578155_19 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004501 260.0
BYD3_k127_7578155_2 lysine biosynthetic process via aminoadipic acid - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001395 557.0
BYD3_k127_7578155_20 Uncharacterized protein conserved in bacteria (DUF2272) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000247 251.0
BYD3_k127_7578155_21 ABC transporter K02065 - - 0.0000000000000000000000000000000000000000000000000000000000000000003188 239.0
BYD3_k127_7578155_22 O-acyltransferase activity - - - 0.0000000000000000000000000000000000000000000000000000000000001314 224.0
BYD3_k127_7578155_23 Aromatic-ring-opening dioxygenase LigAB, LigA subunit K04100 - 1.13.11.8 0.00000000000000000000000000000000000000000000000000000000001679 210.0
BYD3_k127_7578155_24 - - - - 0.00000000000000000000000000000000000000000000000000000000002765 213.0
BYD3_k127_7578155_25 COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS CutS homologs K07302 - 1.3.99.16 0.000000000000000000000000000000000000000000000000000003984 196.0
BYD3_k127_7578155_26 Lipocalin-like domain K03098 - - 0.0000000000000000000000000000000000000000000000005254 186.0
BYD3_k127_7578155_27 Dioxygenase - - - 0.00000000000000000000000000000000000000000000002231 179.0
BYD3_k127_7578155_28 - - - - 0.00000000000000000000000000000000000000000001294 172.0
BYD3_k127_7578155_29 protein histidine kinase activity - - - 0.00000000000000000000000000000000000000000169 162.0
BYD3_k127_7578155_3 PFAM Amidohydrolase 2 K10221 - 3.1.1.57 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007014 530.0
BYD3_k127_7578155_30 Belongs to the UPF0145 family - - - 0.0000000000000000000000000000000000000001429 152.0
BYD3_k127_7578155_31 PrpF protein K16514 - 5.3.2.8 0.0000000000000000000000000000000000000699 145.0
BYD3_k127_7578155_32 - - - - 0.00000000000000000000000000000001168 138.0
BYD3_k127_7578155_34 Methyltransferase FkbM domain - - - 0.00000000000000000000000000000007357 136.0
BYD3_k127_7578155_35 - - - - 0.0000000000000000000000000000004187 136.0
BYD3_k127_7578155_36 Rieske-like [2Fe-2S] domain K00363 - 1.7.1.15 0.0000000000000000000000000002846 122.0
BYD3_k127_7578155_37 hyperosmotic response - - - 0.000000000000000000000001553 115.0
BYD3_k127_7578155_39 - - - - 0.00000000000000000000004061 112.0
BYD3_k127_7578155_4 Oxidoreductase family, NAD-binding Rossmann fold K10219 - 1.1.1.312 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002824 504.0
BYD3_k127_7578155_40 - - - - 0.00000000000000000000007819 102.0
BYD3_k127_7578155_42 Belongs to the anti-sigma-factor antagonist family K04749 - - 0.000000000000000000001903 101.0
BYD3_k127_7578155_43 - - - - 0.000000000000000000003023 101.0
BYD3_k127_7578155_44 Metallo-beta-lactamase superfamily - - - 0.00000000000000000001657 103.0
BYD3_k127_7578155_45 - - - - 0.00000000000000000005305 100.0
BYD3_k127_7578155_46 - - - - 0.00000000000000000005682 96.0
BYD3_k127_7578155_47 PFAM Lytic transglycosylase catalytic - - - 0.0000000000000000001627 102.0
BYD3_k127_7578155_49 - - - - 0.000000000000001124 82.0
BYD3_k127_7578155_5 Catalytic LigB subunit of aromatic ring-opening dioxygenase K04099,K04101 - 1.13.11.57,1.13.11.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001432 491.0
BYD3_k127_7578155_50 - - - - 0.000000000000007615 85.0
BYD3_k127_7578155_51 - - - - 0.0000000000000417 83.0
BYD3_k127_7578155_52 lipolytic protein G-D-S-L family - - - 0.00000000000004325 83.0
BYD3_k127_7578155_53 - - - - 0.00000000000004328 85.0
BYD3_k127_7578155_55 - - - - 0.0000000000001412 79.0
BYD3_k127_7578155_56 - - - - 0.00000000001318 70.0
BYD3_k127_7578155_57 Domain of unknown function (DUF4159) - - - 0.00000000008827 71.0
BYD3_k127_7578155_58 protein conserved in bacteria K15539 - - 0.000000003118 68.0
BYD3_k127_7578155_59 protein conserved in bacteria K15539 - - 0.0000002203 61.0
BYD3_k127_7578155_6 D-isomer specific 2-hydroxyacid dehydrogenase K03778 - 1.1.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001491 495.0
BYD3_k127_7578155_60 COG0457 FOG TPR repeat - - - 0.000002221 60.0
BYD3_k127_7578155_61 amidohydrolase - - - 0.000005121 49.0
BYD3_k127_7578155_62 transposition K07497 - - 0.000008518 51.0
BYD3_k127_7578155_63 transglycosylase K08307 - - 0.00002599 56.0
BYD3_k127_7578155_64 - - - - 0.0003546 51.0
BYD3_k127_7578155_65 - - - - 0.0007284 46.0
BYD3_k127_7578155_66 AMP binding - - - 0.0008399 49.0
BYD3_k127_7578155_7 Belongs to the glutaminase family K01425 - 3.5.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001301 472.0
BYD3_k127_7578155_8 acyl-CoA dehydrogenase activity K22027 - 1.14.13.235 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006468 441.0
BYD3_k127_7578155_9 Peptidase family M50 K06212,K06402 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005901 433.0
BYD3_k127_7620460_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001429 419.0
BYD3_k127_7620460_1 Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME) K03594,K04035 - 1.14.13.81,1.16.3.1 0.000000000000000000000001367 108.0
BYD3_k127_7620460_2 - - - - 0.000000000000000009738 89.0
BYD3_k127_7620460_4 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.0000000000000003989 92.0
BYD3_k127_7647743_0 glycosyl transferase family 2 - - - 4.044e-219 730.0
BYD3_k127_7647743_1 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000008143 268.0
BYD3_k127_7647743_2 glycosyl transferase group 1 - - - 0.000000000000000000000000000000000000000000000000000000000001595 219.0
BYD3_k127_7647743_3 Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose K01711 - 4.2.1.47 0.0000000000000000005213 87.0
BYD3_k127_7713800_0 Uncharacterized protein conserved in bacteria (DUF2169) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004615 355.0
BYD3_k127_7713800_1 lyase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001072 347.0
BYD3_k127_7713800_2 synthase K00647 - 2.3.1.41 0.000000000000000000000000000000000000000000000000000000000000000000000000000001815 278.0
BYD3_k127_7713800_3 Domain of unknown function (DUF4150) - - - 0.00000000000000000000000000000000000000000000000000000000007343 215.0
BYD3_k127_7713800_4 Rhs element Vgr protein K11904 - - 0.0000000000000000000000000000000000000000000000000000000001065 207.0
BYD3_k127_7713800_5 - - - - 0.000000000000000000000000000000000000000000000000000000702 201.0
BYD3_k127_7713800_6 - - - - 0.0000000000000000002854 100.0
BYD3_k127_7760063_0 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001239 268.0
BYD3_k127_7800281_0 Penicillinase repressor - - - 0.000000000000000000000005684 105.0
BYD3_k127_7800281_1 Peptidase M56, BlaR1 - - - 0.0000000000000000000005622 111.0
BYD3_k127_7800281_2 DNA ligase K01971 - 6.5.1.1 0.0000000000000007035 78.0
BYD3_k127_7811305_0 Domain of unknown function (DUF5117) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006377 538.0
BYD3_k127_7811305_1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000007436 214.0
BYD3_k127_7811305_2 - - - - 0.00000000000000000000000000000000000000002849 161.0
BYD3_k127_7811305_3 PFAM Glyoxalase bleomycin resistance protein dioxygenase K07104 - 1.13.11.2 0.00000000000000000000000001074 114.0
BYD3_k127_7880647_0 CHASE K02488,K21009 - 2.7.7.65 0.000000000000000000000000000000000000000000000001311 193.0
BYD3_k127_7895969_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 0.0 1103.0
BYD3_k127_7895969_1 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 GO:0003674,GO:0003824,GO:0004812,GO:0004823,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006429,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.4 8.446e-311 973.0
BYD3_k127_7895969_10 Belongs to the citrate synthase family K01647 - 2.3.3.1 2.474e-210 665.0
BYD3_k127_7895969_100 PFAM Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000002165 237.0
BYD3_k127_7895969_101 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.000000000000000000000000000000000000000000000000000000000000003032 229.0
BYD3_k127_7895969_102 amine dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000003595 233.0
BYD3_k127_7895969_103 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) K03183 - 2.1.1.163,2.1.1.201 0.000000000000000000000000000000000000000000000000000000000001032 226.0
BYD3_k127_7895969_104 ubiE/COQ5 methyltransferase family K00570 - 2.1.1.17,2.1.1.71 0.000000000000000000000000000000000000000000000000000000001046 209.0
BYD3_k127_7895969_105 amine dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000003161 216.0
BYD3_k127_7895969_106 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000001176 208.0
BYD3_k127_7895969_107 Modulates transcription in response to changes in cellular NADH NAD( ) redox state K01926 - - 0.0000000000000000000000000000000000000000000000000000001154 203.0
BYD3_k127_7895969_108 Cobalamin B12-binding K01849 - 5.4.99.2 0.0000000000000000000000000000000000000000000000000000003101 196.0
BYD3_k127_7895969_109 IstB-like ATP binding protein K02315 - - 0.000000000000000000000000000000000000000000000000000005859 200.0
BYD3_k127_7895969_11 Sulfite reductase K00366,K00381,K00392 - 1.7.7.1,1.8.1.2,1.8.7.1 1.632e-196 629.0
BYD3_k127_7895969_110 Lipid kinase - - - 0.000000000000000000000000000000000000000000000000000008625 202.0
BYD3_k127_7895969_111 ubiE/COQ5 methyltransferase family K00570 - 2.1.1.17,2.1.1.71 0.000000000000000000000000000000000000000000000000000008974 197.0
BYD3_k127_7895969_112 Catalyzes the dehydration of chorismate into 3- (1- carboxyvinyl)oxy benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K07081,K11782,K11784 - 1.21.98.1,4.2.1.151 0.00000000000000000000000000000000000000000000000000001357 199.0
BYD3_k127_7895969_113 PFAM 2Fe-2S -binding K03518,K07302,K13483 - 1.2.5.3,1.3.99.16 0.00000000000000000000000000000000000000000000000000519 187.0
BYD3_k127_7895969_114 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 GO:0002682,GO:0002683,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0006732,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009605,GO:0009607,GO:0009987,GO:0016043,GO:0016829,GO:0016849,GO:0018130,GO:0019538,GO:0019637,GO:0019720,GO:0022607,GO:0031347,GO:0031348,GO:0034214,GO:0035821,GO:0040007,GO:0042802,GO:0043170,GO:0043207,GO:0043545,GO:0043933,GO:0044003,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044403,GO:0044413,GO:0044414,GO:0044419,GO:0045088,GO:0045824,GO:0046483,GO:0048519,GO:0048583,GO:0048585,GO:0050776,GO:0050777,GO:0050789,GO:0050896,GO:0051186,GO:0051188,GO:0051189,GO:0051259,GO:0051701,GO:0051704,GO:0051707,GO:0051817,GO:0051832,GO:0051833,GO:0052031,GO:0052037,GO:0052167,GO:0052170,GO:0052173,GO:0052200,GO:0052255,GO:0052261,GO:0052306,GO:0052309,GO:0052552,GO:0052553,GO:0052561,GO:0052562,GO:0052564,GO:0052572,GO:0061799,GO:0065003,GO:0065007,GO:0071704,GO:0071840,GO:0075136,GO:0080134,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.6.1.17 0.00000000000000000000000000000000000000000000002233 177.0
BYD3_k127_7895969_115 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00337,K00338 GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0030312,GO:0044424,GO:0044444,GO:0044464,GO:0071944 1.6.5.3 0.0000000000000000000000000000000000000000000002702 171.0
BYD3_k127_7895969_116 Peptidase C26 K07010 - - 0.0000000000000000000000000000000000000000000003177 178.0
BYD3_k127_7895969_117 PFAM von Willebrand factor type A K07114,K12511 - - 0.0000000000000000000000000000000000000000000004919 178.0
BYD3_k127_7895969_118 Domain of unknown function (DUF374) K09778 - - 0.00000000000000000000000000000000000000000001255 171.0
BYD3_k127_7895969_119 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K15727 - - 0.00000000000000000000000000000000000000000001444 178.0
BYD3_k127_7895969_12 oligopeptide transporter, OPT family - - - 1.051e-195 630.0
BYD3_k127_7895969_120 TamB, inner membrane protein subunit of TAM complex K09800 - - 0.00000000000000000000000000000000000000000008729 186.0
BYD3_k127_7895969_121 protein-(glutamine-N5) methyltransferase activity - - - 0.0000000000000000000000000000000000000000001952 164.0
BYD3_k127_7895969_122 PFAM Transglycosylase SLT domain K08309 - - 0.0000000000000000000000000000000000000000003484 166.0
BYD3_k127_7895969_123 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 - 2.1.1.190 0.0000000000000000000000000000000000000000003489 173.0
BYD3_k127_7895969_124 Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor K03524 - 6.3.4.15 0.0000000000000000000000000000000000000000007212 168.0
BYD3_k127_7895969_125 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000007574 173.0
BYD3_k127_7895969_126 PFAM peptidase C60, sortase A and B K07284 - 3.4.22.70 0.00000000000000000000000000000000000000001693 161.0
BYD3_k127_7895969_127 Transcriptional regulator, MerR family K13640 GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 - 0.0000000000000000000000000000000000000002259 154.0
BYD3_k127_7895969_128 PepSY-associated TM region - - - 0.0000000000000000000000000000000000000008723 160.0
BYD3_k127_7895969_129 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.0000000000000000000000000000000000000009563 158.0
BYD3_k127_7895969_13 homocysteine S-methyltransferase K00297,K00547 - 1.5.1.20,2.1.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000122 626.0
BYD3_k127_7895969_130 Peptidase C14 caspase catalytic subunit p20 - - - 0.000000000000000000000000000000000000003498 160.0
BYD3_k127_7895969_131 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 GO:0000906,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.78 0.00000000000000000000000000000000000001139 156.0
BYD3_k127_7895969_132 CarD-like/TRCF domain K07736 - - 0.00000000000000000000000000000000000001542 152.0
BYD3_k127_7895969_133 Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family K00655 - 2.3.1.51 0.00000000000000000000000000000000000002803 154.0
BYD3_k127_7895969_134 COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component - - - 0.0000000000000000000000000000000000001006 156.0
BYD3_k127_7895969_135 TIGRFAM geranylgeranyl reductase K21401 - 1.3.99.38 0.0000000000000000000000000000000000002657 156.0
BYD3_k127_7895969_136 PFAM Glyoxalase bleomycin resistance protein dioxygenase K05606 - 5.1.99.1 0.0000000000000000000000000000000000009129 155.0
BYD3_k127_7895969_137 PFAM Cobyrinic acid a,c-diamide synthase K03496 - - 0.000000000000000000000000000000000003462 147.0
BYD3_k127_7895969_138 Domain in cystathionine beta-synthase and other proteins. - - - 0.00000000000000000000000000000000009354 144.0
BYD3_k127_7895969_139 PFAM von Willebrand factor type A K07114,K12511 - - 0.000000000000000000000000000006057 133.0
BYD3_k127_7895969_14 PQQ-like domain K00117 - 1.1.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001614 586.0
BYD3_k127_7895969_140 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.000000000000000000000000000006095 120.0
BYD3_k127_7895969_141 oxidoreductase activity - - - 0.000000000000000000000000000008159 137.0
BYD3_k127_7895969_142 oxidoreductase activity - - - 0.00000000000000000000000000001779 136.0
BYD3_k127_7895969_143 Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes - - - 0.0000000000000000000000000001775 118.0
BYD3_k127_7895969_144 Uncharacterized ACR, COG1399 K07040 - - 0.000000000000000000000000006572 117.0
BYD3_k127_7895969_145 methyltransferase activity K21310 - 2.1.1.334 0.000000000000000000000000006851 122.0
BYD3_k127_7895969_146 WHG domain - - - 0.00000000000000000000000002173 117.0
BYD3_k127_7895969_147 Belongs to the ompA family K03286 - - 0.00000000000000000000000002236 125.0
BYD3_k127_7895969_148 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.00000000000000000000000006413 115.0
BYD3_k127_7895969_149 phosphoesterases, related to the Icc protein - - - 0.000000000000000000000001261 111.0
BYD3_k127_7895969_15 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001393 562.0
BYD3_k127_7895969_150 Isoprenylcysteine carboxyl methyltransferase K16168 - - 0.000000000000000000000002347 111.0
BYD3_k127_7895969_151 - - - - 0.000000000000000000000002378 112.0
BYD3_k127_7895969_152 phosphohistidine phosphatase, SixA K08296 - - 0.000000000000000000000002713 111.0
BYD3_k127_7895969_153 - - - - 0.00000000000000000000002826 114.0
BYD3_k127_7895969_154 general stress protein - - - 0.00000000000000000000005821 104.0
BYD3_k127_7895969_155 - - - - 0.0000000000000000000002188 102.0
BYD3_k127_7895969_156 Putative inner membrane exporter, YdcZ K09936 - - 0.00000000000000000001181 97.0
BYD3_k127_7895969_157 Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate K18285 - 2.5.1.120 0.00000000000000000005035 101.0
BYD3_k127_7895969_158 - - - - 0.00000000000000000008532 93.0
BYD3_k127_7895969_159 Belongs to the bacterial ribosomal protein bL32 family K02911 - - 0.0000000000000000188 84.0
BYD3_k127_7895969_16 Belongs to the class-I aminoacyl-tRNA synthetase family K01887 - 6.1.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000419 575.0
BYD3_k127_7895969_160 - - - - 0.00000000000000002248 91.0
BYD3_k127_7895969_161 ACT domain protein - - - 0.00000000000000002689 87.0
BYD3_k127_7895969_162 - - - - 0.00000000000000006648 85.0
BYD3_k127_7895969_163 TonB C terminal - - - 0.0000000000000001704 90.0
BYD3_k127_7895969_164 - - - - 0.000000000000001429 81.0
BYD3_k127_7895969_165 Ribosomal protein S20 K02968 - - 0.000000000000002502 78.0
BYD3_k127_7895969_166 RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs K03666 - - 0.00000000000001589 76.0
BYD3_k127_7895969_167 Stress-induced bacterial acidophilic repeat motif K06884 - - 0.00000000000002883 79.0
BYD3_k127_7895969_168 Putative Actinobacterial Holin-X, holin superfamily III - - - 0.0000000000003489 76.0
BYD3_k127_7895969_169 DNA polymerase III, delta subunit K02340 - 2.7.7.7 0.0000000000004052 80.0
BYD3_k127_7895969_17 Penicillin-binding protein 1A K05366 - 2.4.1.129,3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006936 580.0
BYD3_k127_7895969_170 - - - - 0.0000000000007907 70.0
BYD3_k127_7895969_171 His Kinase A (phosphoacceptor) domain K13587 - 2.7.13.3 0.000000000001237 73.0
BYD3_k127_7895969_172 - - - - 0.000000000001575 72.0
BYD3_k127_7895969_173 unfolded protein binding K06142 - - 0.000000000003233 75.0
BYD3_k127_7895969_174 Pentapeptide repeats (8 copies) - - - 0.0000000000652 72.0
BYD3_k127_7895969_175 Polymer-forming cytoskeletal - - - 0.0000000002492 73.0
BYD3_k127_7895969_176 CHAD - - - 0.000000004952 67.0
BYD3_k127_7895969_177 BON domain - - - 0.0000001406 63.0
BYD3_k127_7895969_178 Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase K09862 - - 0.000000635 57.0
BYD3_k127_7895969_179 SEC-C motif - - - 0.0000007675 54.0
BYD3_k127_7895969_18 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S K00311 - 1.5.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000354 565.0
BYD3_k127_7895969_180 Sporulation related domain - - - 0.000005127 57.0
BYD3_k127_7895969_181 cell adhesion - - - 0.000006878 56.0
BYD3_k127_7895969_183 - - - - 0.00002678 52.0
BYD3_k127_7895969_184 - - - - 0.0001025 49.0
BYD3_k127_7895969_19 tRNA synthetases class II (D, K and N) K04567 - 6.1.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008208 558.0
BYD3_k127_7895969_2 Heat shock 70 kDa protein K04043 - - 4.687e-299 928.0
BYD3_k127_7895969_20 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase K00261 - 1.4.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001299 542.0
BYD3_k127_7895969_21 Acyl-CoA dehydrogenase, C-terminal domain K00248,K09478 - 1.3.8.1,1.3.99.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003319 524.0
BYD3_k127_7895969_22 Porphyromonas-type peptidyl-arginine deiminase K10536 - 3.5.3.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001368 515.0
BYD3_k127_7895969_23 Pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001983 505.0
BYD3_k127_7895969_24 Carbon-nitrogen hydrolase K12251 - 3.5.1.53 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006706 499.0
BYD3_k127_7895969_25 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 - 1.17.7.1,1.17.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002042 494.0
BYD3_k127_7895969_26 Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine K01733 - 4.2.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001276 487.0
BYD3_k127_7895969_27 Elongator protein 3, MiaB family, Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002401 473.0
BYD3_k127_7895969_28 Phosphotransfer between the C1 and C5 carbon atoms of pentose K01839 - 5.4.2.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002164 464.0
BYD3_k127_7895969_29 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003738 469.0
BYD3_k127_7895969_3 Belongs to the ClpA ClpB family K03696 GO:0006950,GO:0008150,GO:0010035,GO:0010038,GO:0042221,GO:0046686,GO:0046688,GO:0050896,GO:0097501,GO:1990169,GO:1990170 - 9.155e-269 849.0
BYD3_k127_7895969_30 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001371 451.0
BYD3_k127_7895969_31 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead K00087 - 1.17.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001644 462.0
BYD3_k127_7895969_32 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003729 434.0
BYD3_k127_7895969_33 Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme K02302 - 1.3.1.76,2.1.1.107,4.99.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000592 427.0
BYD3_k127_7895969_34 Tannase and feruloyl esterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002277 427.0
BYD3_k127_7895969_35 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002266 433.0
BYD3_k127_7895969_36 Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2) K11784 - 1.21.98.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009942 416.0
BYD3_k127_7895969_37 homoserine dehydrogenase K00003 - 1.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002829 406.0
BYD3_k127_7895969_38 ATPase family associated with various cellular activities (AAA) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001785 400.0
BYD3_k127_7895969_39 Eukaryotic DNA topoisomerase I, catalytic core K03168 - 5.99.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004617 394.0
BYD3_k127_7895969_4 Carbamoyltransferase C-terminus K00612 - - 2.621e-260 815.0
BYD3_k127_7895969_40 Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S- adenosylmethionine. Has broad substrate specificity with 6- aminopurine nucleosides as preferred substrates K00772 - 2.4.2.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001264 386.0
BYD3_k127_7895969_41 Putative zinc-binding metallo-peptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001756 388.0
BYD3_k127_7895969_42 TIGRFAM phosphate binding protein K02040 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000645 386.0
BYD3_k127_7895969_43 3-oxoacyl-[acyl-carrier-protein] synthase activity K09458 - 2.3.1.179 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003003 391.0
BYD3_k127_7895969_44 ATP-grasp domain K01921 - 6.3.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007527 379.0
BYD3_k127_7895969_45 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K01524,K07012 - 3.6.1.11,3.6.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001567 383.0
BYD3_k127_7895969_46 Belongs to the dGTPase family. Type 2 subfamily K01129 - 3.1.5.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002639 366.0
BYD3_k127_7895969_47 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006 362.0
BYD3_k127_7895969_48 PQQ-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002126 362.0
BYD3_k127_7895969_49 ATP-grasp domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009072 363.0
BYD3_k127_7895969_5 ATP-dependent peptidase activity K01338 - 3.4.21.53 7.624e-248 788.0
BYD3_k127_7895969_50 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002938 362.0
BYD3_k127_7895969_51 PFAM PfkB domain protein K00856 - 2.7.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003634 349.0
BYD3_k127_7895969_52 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004895 353.0
BYD3_k127_7895969_53 Electron transfer flavoprotein FAD-binding domain K03522 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003152 345.0
BYD3_k127_7895969_54 Alpha beta hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000361 349.0
BYD3_k127_7895969_55 PQQ-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006116 353.0
BYD3_k127_7895969_56 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007343 347.0
BYD3_k127_7895969_57 TIGRFAM lipoprotein releasing system, transmembrane protein, LolC E family K09808 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006756 338.0
BYD3_k127_7895969_58 Histidine kinase internal region K02478 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009732 338.0
BYD3_k127_7895969_59 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000219 333.0
BYD3_k127_7895969_6 AcrB/AcrD/AcrF family K03296 - - 3.419e-239 794.0
BYD3_k127_7895969_60 HI0933-like protein K07007 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001844 330.0
BYD3_k127_7895969_61 Haem-degrading - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002722 325.0
BYD3_k127_7895969_62 Surface antigen variable number K07277 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002926 346.0
BYD3_k127_7895969_63 Binding-protein-dependent transport system inner membrane component K02038 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004286 316.0
BYD3_k127_7895969_64 malonyl CoA-acyl carrier protein transacylase K00645 - 2.3.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006884 323.0
BYD3_k127_7895969_65 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001448 317.0
BYD3_k127_7895969_66 Tetratricopeptide repeats - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004446 336.0
BYD3_k127_7895969_67 Protein of unknown function DUF58 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005213 314.0
BYD3_k127_7895969_68 GTPase activity K07588 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001 304.0
BYD3_k127_7895969_69 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007939 302.0
BYD3_k127_7895969_7 Carboxypeptidase regulatory-like domain - - - 1.546e-237 768.0
BYD3_k127_7895969_70 Enoyl-CoA hydratase/isomerase K01715 - 4.2.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004161 295.0
BYD3_k127_7895969_71 Involved in the biosynthesis of porphyrin-containing compound - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002786 298.0
BYD3_k127_7895969_72 POT family K03305 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001647 288.0
BYD3_k127_7895969_73 Electron transfer flavoprotein domain K03521 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002382 283.0
BYD3_k127_7895969_74 CO dehydrogenase flavoprotein C-terminal domain K11178 - 1.17.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000282 289.0
BYD3_k127_7895969_75 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008202 306.0
BYD3_k127_7895969_76 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K00042 - 1.1.1.60 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001092 285.0
BYD3_k127_7895969_77 Udp N-acetylglucosamine O-acyltransferase; Domain 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002906 286.0
BYD3_k127_7895969_78 Oxidoreductase family, NAD-binding Rossmann fold K09949 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001841 280.0
BYD3_k127_7895969_79 TonB-dependent Receptor Plug K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004903 289.0
BYD3_k127_7895969_8 Methylmalonyl-CoA mutase K01848 - 5.4.99.2 2.537e-220 694.0
BYD3_k127_7895969_80 Protein of unknown function (DUF1009) K09949 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000771 275.0
BYD3_k127_7895969_81 PQQ-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002527 280.0
BYD3_k127_7895969_82 Histone deacetylase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005459 281.0
BYD3_k127_7895969_83 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001085 280.0
BYD3_k127_7895969_84 Putative glutamine amidotransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001118 287.0
BYD3_k127_7895969_85 short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000001825 264.0
BYD3_k127_7895969_86 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 - 2.5.1.75 0.00000000000000000000000000000000000000000000000000000000000000000000000004109 262.0
BYD3_k127_7895969_87 Two component transcriptional regulator, LytTR family K02477,K07705 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001044 266.0
BYD3_k127_7895969_88 Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate K00872 - 2.7.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000001393 255.0
BYD3_k127_7895969_89 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003307 249.0
BYD3_k127_7895969_9 Carboxypeptidase regulatory-like domain - - - 4.993e-211 695.0
BYD3_k127_7895969_90 domain, Protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002824 274.0
BYD3_k127_7895969_91 Surface antigen K07277 - - 0.00000000000000000000000000000000000000000000000000000000000000000000002906 264.0
BYD3_k127_7895969_92 UbiA prenyltransferase family K03179 - 2.5.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000002269 248.0
BYD3_k127_7895969_93 lactoylglutathione lyase activity K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000003468 246.0
BYD3_k127_7895969_94 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278,K00767 - 1.4.3.16,2.4.2.19 0.0000000000000000000000000000000000000000000000000000000000000000000006054 247.0
BYD3_k127_7895969_95 Amidohydrolase family K20810 - 3.5.4.40 0.000000000000000000000000000000000000000000000000000000000000000000001561 250.0
BYD3_k127_7895969_96 Protein of unknown function DUF47 K02039,K07220 GO:0000287,GO:0001558,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006873,GO:0006950,GO:0007154,GO:0008150,GO:0009266,GO:0009267,GO:0009268,GO:0009405,GO:0009408,GO:0009605,GO:0009628,GO:0009892,GO:0009987,GO:0009991,GO:0010468,GO:0010563,GO:0010605,GO:0010629,GO:0010966,GO:0016020,GO:0016036,GO:0019220,GO:0019222,GO:0019725,GO:0019897,GO:0019898,GO:0022898,GO:0030002,GO:0030145,GO:0030320,GO:0030643,GO:0031323,GO:0031324,GO:0031667,GO:0031668,GO:0031669,GO:0032409,GO:0032410,GO:0032412,GO:0032413,GO:0032879,GO:0033554,GO:0034605,GO:0034762,GO:0034763,GO:0034765,GO:0034766,GO:0040008,GO:0042221,GO:0042592,GO:0042594,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0043269,GO:0043271,GO:0044070,GO:0044092,GO:0044419,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0045936,GO:0046677,GO:0046872,GO:0046914,GO:0046983,GO:0048519,GO:0048523,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050896,GO:0051049,GO:0051051,GO:0051128,GO:0051174,GO:0051704,GO:0051716,GO:0055062,GO:0055081,GO:0055082,GO:0055083,GO:0060255,GO:0065007,GO:0065008,GO:0065009,GO:0070887,GO:0071214,GO:0071236,GO:0071467,GO:0071496,GO:0071944,GO:0072501,GO:0072502,GO:0072505,GO:0072506,GO:0098771,GO:0104004,GO:1903792,GO:1903795,GO:1903796,GO:1903959,GO:1903960,GO:2000185,GO:2000186 - 0.000000000000000000000000000000000000000000000000000000000000000000007947 241.0
BYD3_k127_7895969_97 Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner K09810 - - 0.00000000000000000000000000000000000000000000000000000000000000000003311 239.0
BYD3_k127_7895969_98 Glycosyl transferase family 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000004788 237.0
BYD3_k127_7895969_99 Peptidase family M28 - - - 0.00000000000000000000000000000000000000000000000000000000000000004846 235.0
BYD3_k127_7973425_0 Belongs to the glycosyl hydrolase 13 family K01214 - 3.2.1.68 6.513e-283 876.0
BYD3_k127_8004051_0 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003229 473.0
BYD3_k127_8150526_0 Glycine D-amino acid oxidase (deaminating) - - - 5.942e-202 640.0
BYD3_k127_8150526_1 Multicopper oxidase K22348 - 1.16.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000105 512.0
BYD3_k127_8150526_2 Outer membrane efflux protein K15725 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003963 287.0
BYD3_k127_8150526_3 PFAM von Willebrand factor type A K07114,K12511 - - 0.00000000000000000000000000000000000000000000000000000000002552 217.0
BYD3_k127_8150526_4 PFAM peptidase C60, sortase A and B K07284 - 3.4.22.70 0.000000000000000000000000000000001305 143.0
BYD3_k127_8150526_5 - - - - 0.00000000000000000000000000008251 126.0
BYD3_k127_8150526_7 Phospholipase D. Active site motifs. K06131 - - 0.000000000000004894 75.0
BYD3_k127_8150526_8 YHS domain - - - 0.0000000000003607 70.0
BYD3_k127_8150526_9 - - - - 0.0000000000525 73.0
BYD3_k127_8165670_0 COG2801 Transposase and inactivated derivatives - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001167 404.0
BYD3_k127_8165670_1 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001526 248.0
BYD3_k127_8165670_2 PFAM Glycosyl transferase family 2 - - - 0.00000000000000000000002488 101.0
BYD3_k127_8219029_0 tungstate binding K15495 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004296 299.0
BYD3_k127_8219029_1 Domain of unknown function (DUF1731) K07071 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008846 286.0
BYD3_k127_8219029_2 endonuclease III K01247 - 3.2.2.21 0.0000000000000000000000000000000000000000008074 160.0
BYD3_k127_8280222_0 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009326 351.0
BYD3_k127_8280222_1 Ribonuclease, BN K07058 - - 0.000000000000000000000000000000000000000000000000000000006312 211.0
BYD3_k127_8280222_2 Belongs to the Glu Leu Phe Val dehydrogenases family K00261 - 1.4.1.3 0.000000000000000000000000000000000000000000000000001065 201.0
BYD3_k127_8280222_3 Belongs to the Glu Leu Phe Val dehydrogenases family K00261 - 1.4.1.3 0.0000000000000000000000000001773 131.0
BYD3_k127_8280222_4 SnoaL-like polyketide cyclase K06893 - - 0.000000000000000000000000007213 114.0
BYD3_k127_8280222_5 - - - - 0.0000000000007774 79.0
BYD3_k127_8280222_6 glycosyl transferase family K00697,K16055 - 2.4.1.15,2.4.1.347,3.1.3.12 0.0000003058 61.0
BYD3_k127_8281480_0 similarity to GP 17427840 K07497 - - 0.00000000000000000000000000000000000000000000000000000000000000000000005667 248.0
BYD3_k127_8281480_1 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000001351 226.0
BYD3_k127_8281480_2 Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.0000000000000000000000000000000001925 134.0
BYD3_k127_8281480_3 WD40 domain protein beta Propeller K12132 - 2.7.11.1 0.00000000000000000000006478 101.0
BYD3_k127_8281480_5 coenzyme binding K07071 - - 0.000006658 50.0
BYD3_k127_8284189_0 Maltogenic Amylase, C-terminal domain K05341,K05343 - 2.4.1.4,3.2.1.1,5.4.99.16 1.616e-279 867.0
BYD3_k127_8284189_1 TIGRFAM decaheme c-type cytochrome, OmcA MtrC family - - - 2.999e-277 878.0
BYD3_k127_8284189_10 Major facilitator Superfamily K08195 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003729 406.0
BYD3_k127_8284189_11 amine dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003838 398.0
BYD3_k127_8284189_12 Protein kinase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002245 400.0
BYD3_k127_8284189_13 PFAM amidohydrolase 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001068 389.0
BYD3_k127_8284189_14 PFAM amidohydrolase 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002108 365.0
BYD3_k127_8284189_15 Belongs to the ABC transporter superfamily K10112 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006255 355.0
BYD3_k127_8284189_16 FAD binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002353 361.0
BYD3_k127_8284189_17 Glycosyl transferase, family 2 K21349 - 2.4.1.268 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007075 346.0
BYD3_k127_8284189_18 PFAM binding-protein-dependent transport systems inner membrane component K02034 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005104 311.0
BYD3_k127_8284189_19 amine dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002613 294.0
BYD3_k127_8284189_2 Dipeptidyl carboxypeptidase K01284 - 3.4.15.5 5.325e-234 746.0
BYD3_k127_8284189_20 4,5-dihydroxyphthalate decarboxylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007304 290.0
BYD3_k127_8284189_21 binding-protein-dependent transport systems inner membrane component K02026 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005576 286.0
BYD3_k127_8284189_22 Metallo-beta-lactamase superfamily K01069 - 3.1.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002046 279.0
BYD3_k127_8284189_23 PFAM binding-protein-dependent transport systems inner membrane component K02033 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001241 295.0
BYD3_k127_8284189_24 PFAM binding-protein-dependent transport systems inner membrane component K02025,K10237 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002359 276.0
BYD3_k127_8284189_25 PFAM extracellular solute-binding protein family 1 K02027,K10236 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002729 271.0
BYD3_k127_8284189_26 Carboxypeptidase regulatory-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000007756 271.0
BYD3_k127_8284189_27 TonB-dependent receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000001609 251.0
BYD3_k127_8284189_28 glyoxalase bleomycin resistance protein dioxygenase K04750 - - 0.00000000000000000000000000000000000000000000000000000002564 199.0
BYD3_k127_8284189_29 carboxylic ester hydrolase activity K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000007776 193.0
BYD3_k127_8284189_3 Carboxypeptidase regulatory-like domain - - - 3.025e-212 699.0
BYD3_k127_8284189_30 Domain of unknown function (DUF892) - - - 0.00000000000000000000000000000000000000000000003142 176.0
BYD3_k127_8284189_31 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) - - - 0.000000000000000000000000000000000000000000001586 181.0
BYD3_k127_8284189_32 Redoxin K03564 - 1.11.1.15 0.0000000000000000000000000000000000000000000095 169.0
BYD3_k127_8284189_33 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000000000000000000000000000001908 163.0
BYD3_k127_8284189_34 cAMP biosynthetic process K08282,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000005164 178.0
BYD3_k127_8284189_35 helix_turn_helix multiple antibiotic resistance protein - - - 0.000000000000000000000000000000000000003759 151.0
BYD3_k127_8284189_36 Alpha/beta hydrolase of unknown function (DUF900) - - - 0.00000000000000000000000000000000000001057 162.0
BYD3_k127_8284189_37 CBS domain - - - 0.00000000000000000000000000000000000003611 149.0
BYD3_k127_8284189_38 - - - - 0.0000000000000000000000000000000000002192 148.0
BYD3_k127_8284189_39 - - - - 0.000000000000000000000000000000000009542 146.0
BYD3_k127_8284189_4 Belongs to the ABC transporter superfamily K02031,K02032,K13896,K19229,K19230 GO:0000166,GO:0003674,GO:0005215,GO:0005488,GO:0005524,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0008144,GO:0008150,GO:0008324,GO:0008519,GO:0009987,GO:0015075,GO:0015101,GO:0015203,GO:0015489,GO:0015672,GO:0015695,GO:0015696,GO:0015846,GO:0015847,GO:0017076,GO:0022857,GO:0030001,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034220,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071804,GO:0071805,GO:0072488,GO:0097159,GO:0097367,GO:0098655,GO:0098660,GO:0098662,GO:1901265,GO:1901363,GO:1902047 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001501 567.0
BYD3_k127_8284189_40 transmembrane transport - - - 0.00000000000000000000000000000000003264 143.0
BYD3_k127_8284189_41 COGs COG1629 Outer membrane receptor protein mostly Fe transport K02014 - - 0.0000000000000000000000000000000003197 153.0
BYD3_k127_8284189_42 AraC-like ligand binding domain - - - 0.0000000000000000000000000004019 121.0
BYD3_k127_8284189_43 - - - - 0.00000000000000000000000003568 118.0
BYD3_k127_8284189_44 - - - - 0.0000000000000000000000008439 117.0
BYD3_k127_8284189_45 Transmembrane sensor domain - - - 0.000000000000000000000001541 120.0
BYD3_k127_8284189_46 DinB family - - - 0.000000000000000000000003771 113.0
BYD3_k127_8284189_47 DoxX K15977 - - 0.000000000000000000000004667 113.0
BYD3_k127_8284189_49 Domain of unknown function (DU1801) K05937 - - 0.0000000000000000000002298 99.0
BYD3_k127_8284189_5 PFAM extracellular solute-binding protein, family 5 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003433 552.0
BYD3_k127_8284189_50 - - - - 0.00000000000000000004704 102.0
BYD3_k127_8284189_51 - - - - 0.00000000000000000008584 91.0
BYD3_k127_8284189_52 - - - - 0.0000000000000000003733 91.0
BYD3_k127_8284189_53 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 - 6.1.1.20 0.000000000000000008804 96.0
BYD3_k127_8284189_54 Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1- 4)- glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB K16147 - 2.4.99.16 0.0000000000002627 79.0
BYD3_k127_8284189_55 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000004777 81.0
BYD3_k127_8284189_56 - - - - 0.000000000003223 74.0
BYD3_k127_8284189_57 Maltogenic Amylase, C-terminal domain K05343 - 3.2.1.1,5.4.99.16 0.0000000008591 70.0
BYD3_k127_8284189_58 Transcriptional regulator, Crp Fnr family - - - 0.000000001235 61.0
BYD3_k127_8284189_59 Cysteine-rich CPXCG - - - 0.00000001669 66.0
BYD3_k127_8284189_6 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K00446 - 1.13.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002912 501.0
BYD3_k127_8284189_60 - - - - 0.00000005364 63.0
BYD3_k127_8284189_61 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.0000002889 54.0
BYD3_k127_8284189_62 - - - - 0.000001893 53.0
BYD3_k127_8284189_63 - - - - 0.000002842 56.0
BYD3_k127_8284189_64 sequence-specific DNA binding K07726,K13655 - - 0.00000293 54.0
BYD3_k127_8284189_65 - - - - 0.000005231 59.0
BYD3_k127_8284189_66 - - - - 0.00004737 53.0
BYD3_k127_8284189_67 Protein tyrosine kinase K12132 - 2.7.11.1 0.0007365 43.0
BYD3_k127_8284189_7 PFAM Methionine synthase vitamin-B12 independent K00549 - 2.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009178 502.0
BYD3_k127_8284189_8 antibiotic catabolic process - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001462 444.0
BYD3_k127_8284189_9 alpha/beta hydrolase fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006503 419.0
BYD3_k127_8317354_0 IMG reference gene - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003644 381.0
BYD3_k127_8317354_1 Putative restriction endonuclease - - - 0.00000000000000000000000000006554 121.0
BYD3_k127_8327260_0 Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity K06188 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003969 317.0
BYD3_k127_8327260_1 Transmembrane secretion effector - - - 0.00000000000000000000000000002312 119.0
BYD3_k127_8327260_2 cheY-homologous receiver domain - - - 0.0000000000000007524 83.0
BYD3_k127_8430350_0 Dehydrogenase E1 component K00164,K01616 GO:0000287,GO:0003674,GO:0003824,GO:0004591,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0006103,GO:0008150,GO:0008152,GO:0008683,GO:0009055,GO:0009060,GO:0009987,GO:0015980,GO:0016020,GO:0016491,GO:0016624,GO:0016740,GO:0016744,GO:0016829,GO:0016830,GO:0016831,GO:0016903,GO:0016999,GO:0017144,GO:0019752,GO:0019842,GO:0022900,GO:0030312,GO:0030976,GO:0032991,GO:0036094,GO:0040007,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045239,GO:0045240,GO:0045252,GO:0045254,GO:0045333,GO:0046872,GO:0048037,GO:0050439,GO:0050662,GO:0051186,GO:0055114,GO:0071704,GO:0071944,GO:0072350,GO:0097159,GO:1901363,GO:1901681,GO:1902494,GO:1990204,GO:1990234 1.2.4.2,4.1.1.71 1.33e-322 1011.0
BYD3_k127_8430350_1 Domain of unknown function (DUF5117) - - - 5.173e-321 1004.0
BYD3_k127_8430350_10 Glycosyl transferase family 21 - - - 5.427e-194 624.0
BYD3_k127_8430350_100 PFAM Major Facilitator Superfamily K08223 - - 0.0000000000000000000000000000000000000000000004584 184.0
BYD3_k127_8430350_101 peptide deformylase activity K01462 GO:0003674,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016810,GO:0016811,GO:0018193,GO:0018206,GO:0019538,GO:0031365,GO:0036211,GO:0042586,GO:0043170,GO:0043412,GO:0043686,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:1901564 3.5.1.88 0.0000000000000000000000000000000000000000000008138 171.0
BYD3_k127_8430350_102 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) K09457 - 1.7.1.13 0.000000000000000000000000000000000000000000006972 165.0
BYD3_k127_8430350_103 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.00000000000000000000000000000000000000000003496 170.0
BYD3_k127_8430350_104 hydrolase of the alpha beta K07018 - - 0.000000000000000000000000000000000000000003035 163.0
BYD3_k127_8430350_105 Histidine kinase - - - 0.000000000000000000000000000000000000000009449 173.0
BYD3_k127_8430350_106 Belongs to the MraZ family K03925 - - 0.00000000000000000000000000000000000000003486 157.0
BYD3_k127_8430350_107 Protein tyrosine kinase - - - 0.000000000000000000000000000000000000000107 167.0
BYD3_k127_8430350_108 Belongs to the GcvT family K06980 - - 0.0000000000000000000000000000000000000001686 162.0
BYD3_k127_8430350_109 TIGRFAM HAD-superfamily hydrolase, subfamily IA, variant 3 K01838 - 5.4.2.6 0.00000000000000000000000000000000000005164 156.0
BYD3_k127_8430350_11 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008421 599.0
BYD3_k127_8430350_110 PFAM Organic solvent tolerance protein K04744 - - 0.00000000000000000000000000000000000006123 164.0
BYD3_k127_8430350_111 AAA domain - - - 0.00000000000000000000000000000000000007623 149.0
BYD3_k127_8430350_112 C4-type zinc ribbon domain K07164 - - 0.0000000000000000000000000000000000001627 150.0
BYD3_k127_8430350_113 Yqey-like protein K09117 - - 0.00000000000000000000000000000000002716 139.0
BYD3_k127_8430350_114 PFAM Cupin 2, conserved barrel - - - 0.00000000000000000000000000000000003952 138.0
BYD3_k127_8430350_115 Reverse transcriptase-like K03469 - 3.1.26.4 0.0000000000000000000000000000000001233 138.0
BYD3_k127_8430350_116 Protein of unknown function (DUF1684) K09164 - - 0.000000000000000000000000000000003506 136.0
BYD3_k127_8430350_117 Hydrolase, alpha beta domain protein K06889 - - 0.000000000000000000000000000000006662 146.0
BYD3_k127_8430350_118 Multi-copper polyphenol oxidoreductase laccase K05810 - - 0.0000000000000000000000000000002413 136.0
BYD3_k127_8430350_119 - - - - 0.0000000000000000000000000000003314 126.0
BYD3_k127_8430350_12 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008452 571.0
BYD3_k127_8430350_120 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.0000000000000000000000000000004601 126.0
BYD3_k127_8430350_121 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.000000000000000000000000000005492 136.0
BYD3_k127_8430350_122 PFAM blue (type 1) copper domain protein - - - 0.00000000000000000000000000002605 126.0
BYD3_k127_8430350_123 PFAM Formiminotransferase-cyclodeaminase - - - 0.00000000000000000000000000008462 124.0
BYD3_k127_8430350_124 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072,K12257 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008150,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0033036,GO:0042886,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944 - 0.00000000000000000000000001189 117.0
BYD3_k127_8430350_125 ABC-2 family transporter protein - - - 0.00000000000000000000000002021 120.0
BYD3_k127_8430350_126 A G-specific adenine glycosylase K03575 - - 0.000000000000000000000001318 108.0
BYD3_k127_8430350_127 - - - - 0.000000000000000000000002587 106.0
BYD3_k127_8430350_128 Smr domain - - - 0.000000000000000000000007145 106.0
BYD3_k127_8430350_129 Domain of unknown function (DUF4154) - - - 0.00000000000000000000003183 112.0
BYD3_k127_8430350_13 Acyl-CoA dehydrogenase, N-terminal domain K00248 - 1.3.8.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002128 561.0
BYD3_k127_8430350_130 - - - - 0.000000000000000000001905 102.0
BYD3_k127_8430350_131 DivIVA protein K04074 - - 0.00000000000000000007383 96.0
BYD3_k127_8430350_132 regulation of translation K03530 - - 0.000000000000000000101 92.0
BYD3_k127_8430350_134 Tetratricopeptide repeat - - - 0.000000000000000001583 99.0
BYD3_k127_8430350_135 lactoylglutathione lyase activity - - - 0.00000000000000000299 96.0
BYD3_k127_8430350_136 transferase activity, transferring acyl groups - - - 0.00000000000000000702 96.0
BYD3_k127_8430350_137 Preprotein translocase, YajC K03210 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0031522,GO:0032991,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.00000000000000000736 88.0
BYD3_k127_8430350_138 Belongs to the UPF0235 family K09131 - - 0.0000000000000000427 85.0
BYD3_k127_8430350_139 ABC transporter K01990,K21397 - - 0.00000000000001068 78.0
BYD3_k127_8430350_14 DeoC/LacD family aldolase K11645 GO:0003674,GO:0003824,GO:0004332,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016829,GO:0016830,GO:0016832,GO:0042802,GO:0044424,GO:0044444,GO:0044464 4.1.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008519 545.0
BYD3_k127_8430350_140 Cell division protein FtsQ K03589 - - 0.00000000001632 76.0
BYD3_k127_8430350_141 Serine hydrolase - - - 0.000000000222 72.0
BYD3_k127_8430350_142 - - - - 0.0000000005509 65.0
BYD3_k127_8430350_143 TIGRFAM amino acid adenylation domain - - - 0.000000002683 69.0
BYD3_k127_8430350_144 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 0.000000004078 67.0
BYD3_k127_8430350_145 peptidyl-tyrosine sulfation - - - 0.00000001058 66.0
BYD3_k127_8430350_146 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic - - - 0.00000003353 60.0
BYD3_k127_8430350_147 AdoMet dependent proline di-methyltransferase - - - 0.00000003365 66.0
BYD3_k127_8430350_148 Transglycosylase SLT domain K08307,K12204 - - 0.00002669 57.0
BYD3_k127_8430350_15 COG0624, acetylornithine deacetylase succinyl-diaminopimelate desuccinylase and related deacylases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003663 548.0
BYD3_k127_8430350_150 Peptidase_C39 like family - - - 0.0003653 53.0
BYD3_k127_8430350_151 Glycosyl transferases group 1 - - - 0.0004492 51.0
BYD3_k127_8430350_16 HELICc2 K03722 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006662 543.0
BYD3_k127_8430350_17 Isocitrate/isopropylmalate dehydrogenase K07246 GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0003862,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006108,GO:0006520,GO:0006551,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009027,GO:0009058,GO:0009081,GO:0009082,GO:0009098,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016615,GO:0016616,GO:0019752,GO:0036094,GO:0043167,GO:0043169,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046553,GO:0046872,GO:0048037,GO:0050662,GO:0051287,GO:0055114,GO:0071704,GO:0097159,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.83,1.1.1.93,4.1.1.73 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003438 514.0
BYD3_k127_8430350_18 Thiolase, C-terminal domain K00632 - 2.3.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002379 513.0
BYD3_k127_8430350_19 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002113 493.0
BYD3_k127_8430350_2 5TM C-terminal transporter carbon starvation CstA K06200 - - 1.004e-283 887.0
BYD3_k127_8430350_20 Belongs to the MurCDEF family K01924 - 6.3.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008191 491.0
BYD3_k127_8430350_21 Nucleotidyl transferase K00973 - 2.7.7.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004419 482.0
BYD3_k127_8430350_22 dihydrolipoamide dehydrogenase K00382 - 1.8.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000148 469.0
BYD3_k127_8430350_23 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008194 456.0
BYD3_k127_8430350_24 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity K07456 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000318 464.0
BYD3_k127_8430350_25 Penicillin-binding protein, dimerisation domain K03587 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001354 456.0
BYD3_k127_8430350_26 Citrate synthase, C-terminal domain K01647 - 2.3.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000268 441.0
BYD3_k127_8430350_27 PFAM NAD-dependent epimerase dehydratase K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007975 437.0
BYD3_k127_8430350_28 Transporter associated domain K03699 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002598 439.0
BYD3_k127_8430350_29 Elongator protein 3, MiaB family, Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004851 447.0
BYD3_k127_8430350_3 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 1.874e-282 878.0
BYD3_k127_8430350_30 The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) K00658 - 2.3.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001132 435.0
BYD3_k127_8430350_31 Methionine synthase K00549 - 2.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002226 433.0
BYD3_k127_8430350_32 acid phosphatase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005397 433.0
BYD3_k127_8430350_33 PFAM NAD-dependent epimerase dehydratase K01784 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002697 435.0
BYD3_k127_8430350_34 Type I phosphodiesterase / nucleotide pyrophosphatase K01113 - 3.1.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002718 429.0
BYD3_k127_8430350_35 Belongs to the ClpA ClpB family K03694 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000919 444.0
BYD3_k127_8430350_36 e3 binding domain K00658 - 2.3.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001035 416.0
BYD3_k127_8430350_37 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0032153,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0044424,GO:0044464,GO:0051301,GO:0097159,GO:0097367,GO:1901265,GO:1901363 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002085 415.0
BYD3_k127_8430350_38 TonB-dependent receptor K02014,K16089 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002225 425.0
BYD3_k127_8430350_39 Transporter associated domain K03699 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002109 412.0
BYD3_k127_8430350_4 Dehydrogenase E1 component K11381 - 1.2.4.4 8.813e-272 853.0
BYD3_k127_8430350_40 acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000252 415.0
BYD3_k127_8430350_41 symporter activity K03307 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005679 409.0
BYD3_k127_8430350_42 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 GO:0000270,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008963,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016020,GO:0016740,GO:0016772,GO:0016780,GO:0030203,GO:0034645,GO:0040007,GO:0042546,GO:0042802,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0044464,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:0071944,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 2.7.8.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001126 398.0
BYD3_k127_8430350_43 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710 - 4.2.1.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005674 392.0
BYD3_k127_8430350_44 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006298 398.0
BYD3_k127_8430350_45 Methyltransferase K06969 - 2.1.1.191 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005541 388.0
BYD3_k127_8430350_46 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001699 397.0
BYD3_k127_8430350_47 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002512 385.0
BYD3_k127_8430350_48 tRNA thio-modification K03151 GO:0000049,GO:0002937,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0017144,GO:0018130,GO:0019438,GO:0034227,GO:0034470,GO:0034641,GO:0034660,GO:0042364,GO:0042723,GO:0042724,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:0090304,GO:0097159,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.8.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006812 379.0
BYD3_k127_8430350_49 response regulator K02481,K07715 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008851 382.0
BYD3_k127_8430350_5 ThiC-associated domain K03147 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.99.17 8.359e-259 806.0
BYD3_k127_8430350_50 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001 376.0
BYD3_k127_8430350_51 Belongs to the metallo-dependent hydrolases superfamily. HutI family K01468 - 3.5.2.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002601 371.0
BYD3_k127_8430350_52 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005453 372.0
BYD3_k127_8430350_53 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005701 365.0
BYD3_k127_8430350_54 Belongs to the SEDS family K03588 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009474 355.0
BYD3_k127_8430350_55 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002373 349.0
BYD3_k127_8430350_56 PFAM glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003593 332.0
BYD3_k127_8430350_57 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003181 335.0
BYD3_k127_8430350_58 FRG - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005499 329.0
BYD3_k127_8430350_59 SPFH domain-Band 7 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003332 326.0
BYD3_k127_8430350_6 COG0457 FOG TPR repeat - - - 1.455e-254 799.0
BYD3_k127_8430350_60 NfeD-like C-terminal, partner-binding K07403 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001361 323.0
BYD3_k127_8430350_61 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009686 316.0
BYD3_k127_8430350_62 PFAM peptidase S58, DmpA K01266 - 3.4.11.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001177 316.0
BYD3_k127_8430350_63 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005692 322.0
BYD3_k127_8430350_64 PA domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001018 320.0
BYD3_k127_8430350_65 FKBP-type peptidyl-prolyl cis-trans isomerase K01802,K03772 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001571 294.0
BYD3_k127_8430350_66 PFAM 1-(5-Phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase K06898 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003201 293.0
BYD3_k127_8430350_67 FES K03575 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007452 289.0
BYD3_k127_8430350_68 DNA modification - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000684 317.0
BYD3_k127_8430350_69 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 - 2.1.1.199 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001912 286.0
BYD3_k127_8430350_7 Peptidase family M1 domain K01256 - 3.4.11.2 4.837e-240 767.0
BYD3_k127_8430350_70 Glycosyltransferase like family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001314 287.0
BYD3_k127_8430350_71 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009074 284.0
BYD3_k127_8430350_72 Belongs to the short-chain dehydrogenases reductases (SDR) family K07124 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000154 267.0
BYD3_k127_8430350_73 Elongator protein 3, MiaB family, Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001422 269.0
BYD3_k127_8430350_74 L,D-transpeptidase catalytic domain K21470 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004189 273.0
BYD3_k127_8430350_75 Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000008218 261.0
BYD3_k127_8430350_76 Mur ligase middle domain K11754 - 6.3.2.12,6.3.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000000001095 269.0
BYD3_k127_8430350_77 PFAM Glycosyl transferase family 2 K00721 - 2.4.1.83 0.000000000000000000000000000000000000000000000000000000000000000000000005567 251.0
BYD3_k127_8430350_78 Squalene/phytoene synthase K02291 - 2.5.1.32,2.5.1.99 0.000000000000000000000000000000000000000000000000000000000000000000000007986 256.0
BYD3_k127_8430350_79 Polysaccharide biosynthesis protein K15856 - 1.1.1.281 0.000000000000000000000000000000000000000000000000000000000000000000001745 248.0
BYD3_k127_8430350_8 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K07516 - 1.1.1.35 1.195e-223 716.0
BYD3_k127_8430350_80 Squalene/phytoene synthase - - - 0.000000000000000000000000000000000000000000000000000000000000000001714 239.0
BYD3_k127_8430350_81 ABC transporter, ATP-binding protein K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000002431 247.0
BYD3_k127_8430350_82 TIGRFAM squalene-associated FAD-dependent desaturase - - - 0.00000000000000000000000000000000000000000000000000000000000000004145 241.0
BYD3_k127_8430350_83 Deoxynucleoside kinase K15518 - 2.7.1.113 0.000000000000000000000000000000000000000000000000000000000000007928 223.0
BYD3_k127_8430350_84 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000000000000000000000008834 217.0
BYD3_k127_8430350_85 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.000000000000000000000000000000000000000000000000000000000003715 214.0
BYD3_k127_8430350_86 PFAM helicase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000003144 232.0
BYD3_k127_8430350_87 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.0000000000000000000000000000000000000000000000000000000001055 211.0
BYD3_k127_8430350_88 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD K03768 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000001133 232.0
BYD3_k127_8430350_89 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009249,GO:0009987,GO:0010467,GO:0018065,GO:0018193,GO:0018205,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0051604,GO:0071704,GO:1901564 2.3.1.181 0.0000000000000000000000000000000000000000000000000000000002973 209.0
BYD3_k127_8430350_9 WD40-like Beta Propeller Repeat - - - 9.619e-196 646.0
BYD3_k127_8430350_90 phosphatidylcholine synthase activity K01004,K17103 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006629,GO:0006644,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009987,GO:0016740,GO:0016772,GO:0016780,GO:0019637,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0050520,GO:0071704,GO:0090407,GO:1901576 2.7.8.24,2.7.8.8 0.000000000000000000000000000000000000000000000000000000007145 207.0
BYD3_k127_8430350_91 dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes K01790 - 5.1.3.13 0.0000000000000000000000000000000000000000000000000000001444 200.0
BYD3_k127_8430350_92 Transglutaminase-like superfamily - - - 0.00000000000000000000000000000000000000000000000000003222 198.0
BYD3_k127_8430350_93 Rhomboid family - - - 0.0000000000000000000000000000000000000000000000000007457 192.0
BYD3_k127_8430350_94 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K00798 - 2.5.1.17 0.000000000000000000000000000000000000000000000000002446 192.0
BYD3_k127_8430350_95 Nudix N-terminal - - - 0.00000000000000000000000000000000000000000000000001395 185.0
BYD3_k127_8430350_96 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000002173 191.0
BYD3_k127_8430350_97 NAD dependent epimerase/dehydratase family - - - 0.00000000000000000000000000000000000000000000000006156 189.0
BYD3_k127_8430350_98 HD domain - - - 0.0000000000000000000000000000000000000000000000001028 202.0
BYD3_k127_8430350_99 radical SAM - - - 0.0000000000000000000000000000000000000000000002117 186.0
BYD3_k127_8446790_0 CoA carboxylase activity K01969,K13778,K15052 - 2.1.3.15,6.4.1.3,6.4.1.4,6.4.1.5 4.48e-251 784.0
BYD3_k127_8446790_1 Protein of unknown function, DUF255 K06888 - - 1.694e-216 695.0
BYD3_k127_8446790_10 ABC transporter K02065 - - 0.0000000000000000000000000000000000000000000000000000000000000000000003147 249.0
BYD3_k127_8446790_11 PFAM Enoyl-CoA hydratase isomerase K13766 - 4.2.1.18 0.000000000000000000000000000000000000000000000000000000000000000002738 235.0
BYD3_k127_8446790_12 ABC-type transport system involved in resistance to organic solvents, periplasmic component K02067 - - 0.000000000000000000000000000000000000000000000000000000000000000007003 242.0
BYD3_k127_8446790_13 Ferritin-like domain K03594 - 1.16.3.1 0.00000000000000000000000000000000000000000000000000000000000000000734 228.0
BYD3_k127_8446790_14 PHP domain K04477 - - 0.000000000000000000000000000000000000000000000004111 187.0
BYD3_k127_8446790_15 Peptidase family M48 - - - 0.00000000000000000000000000000000000000000002072 173.0
BYD3_k127_8446790_16 - - - - 0.0000000000000000000000000000002903 137.0
BYD3_k127_8446790_17 Virulence factor BrkB - - - 0.0000000000000000000000004204 116.0
BYD3_k127_8446790_18 OsmC-like protein K04063 - - 0.00000000000000000000003277 105.0
BYD3_k127_8446790_2 carboxylase K11263 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 6.3.4.14,6.4.1.2,6.4.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001564 509.0
BYD3_k127_8446790_20 Biotin carboxylase C-terminal domain K01968 - 6.4.1.4 0.00000000000002041 79.0
BYD3_k127_8446790_21 Belongs to the 'phage' integrase family - - - 0.0000000003037 66.0
BYD3_k127_8446790_23 Glycosyl transferase family 41 - - - 0.000005602 56.0
BYD3_k127_8446790_24 Uncharacterised protein family (UPF0180) - - - 0.0000148 54.0
BYD3_k127_8446790_3 membrane organization K07277,K09800 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001352 519.0
BYD3_k127_8446790_4 Peptidase family M28 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002512 451.0
BYD3_k127_8446790_5 PFAM aldo keto reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002409 419.0
BYD3_k127_8446790_6 two component, sigma54 specific, transcriptional regulator, Fis family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003913 398.0
BYD3_k127_8446790_7 Pfam Uncharacterised protein family UPF0047 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003042 348.0
BYD3_k127_8446790_8 Hydroxymethylglutaryl-CoA lyase K01640 - 4.1.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003338 323.0
BYD3_k127_8446790_9 Belongs to the MlaE permease family K02066 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001029 248.0
BYD3_k127_8451370_0 peptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009068 392.0
BYD3_k127_8451370_1 TfuA-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000214 348.0
BYD3_k127_8451370_2 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain K19802 - 5.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002383 341.0
BYD3_k127_8451370_3 YcaO cyclodehydratase, ATP-ad Mg2+-binding K09136 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000284 287.0
BYD3_k127_8451370_4 - - - - 0.000000000000001814 86.0
BYD3_k127_8464903_0 Pyridine nucleotide-disulphide oxidoreductase K00362 - 1.7.1.15 0.0 1163.0
BYD3_k127_8464903_1 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00372 - - 0.0 1052.0
BYD3_k127_8464903_10 Carbohydrate family 9 binding domain-like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002103 393.0
BYD3_k127_8464903_11 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001351 377.0
BYD3_k127_8464903_12 Transporter, CPA2 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001849 355.0
BYD3_k127_8464903_13 PFAM amidohydrolase 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007574 342.0
BYD3_k127_8464903_14 COG0600 ABC-type nitrate sulfonate bicarbonate transport system permease component K15577 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001463 352.0
BYD3_k127_8464903_15 amine dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007066 305.0
BYD3_k127_8464903_16 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002377 295.0
BYD3_k127_8464903_17 ABC transporter K02049,K15578,K15579 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006507 289.0
BYD3_k127_8464903_18 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000526 269.0
BYD3_k127_8464903_19 COG1116 ABC-type nitrate sulfonate K15578 - - 0.00000000000000000000000000000000000000000000000000000000000001258 225.0
BYD3_k127_8464903_2 NMT1-like family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009353 557.0
BYD3_k127_8464903_20 cytochrome - - - 0.000000000000000000000000000000000000000000000000000000000002132 221.0
BYD3_k127_8464903_21 Alginate export - - - 0.00000000000000000000000000000000000000000000000000000000005837 222.0
BYD3_k127_8464903_22 Carboxypeptidase regulatory-like domain - - - 0.0000000000000000000000000000000000000000000000000000000009524 229.0
BYD3_k127_8464903_23 Peptidase, M16 K07263 - - 0.00000000000000000000000000000000000000000000000000000001172 213.0
BYD3_k127_8464903_25 Low affinity iron permease - - - 0.0000000000000000000000000000000000000000000229 164.0
BYD3_k127_8464903_26 - - - - 0.0000000000000000000000000000000000002254 153.0
BYD3_k127_8464903_27 - - - - 0.00000000000000000000000000000002728 130.0
BYD3_k127_8464903_28 Rieske-like [2Fe-2S] domain K00363 - 1.7.1.15 0.000000000000000000000002671 104.0
BYD3_k127_8464903_29 - - - - 0.00000005619 61.0
BYD3_k127_8464903_3 LVIVD repeat-containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007514 526.0
BYD3_k127_8464903_30 ig-like, plexins, transcription factors - - - 0.00002518 55.0
BYD3_k127_8464903_4 4Fe-4S dicluster domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003751 516.0
BYD3_k127_8464903_5 Peptidase family M28 K01295 - 3.4.17.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001976 495.0
BYD3_k127_8464903_6 SMART Integrin alpha beta-propellor repeat protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000029 400.0
BYD3_k127_8464903_7 SMART Integrin alpha beta-propellor repeat protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004824 390.0
BYD3_k127_8464903_8 SMART Integrin alpha beta-propellor repeat protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000498 388.0
BYD3_k127_8464903_9 PFAM amidohydrolase 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000764 377.0
BYD3_k127_8524671_0 Amidohydrolase family K01461 - 3.5.1.82 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001683 499.0
BYD3_k127_8524671_1 ABC transporter substrate binding protein K01989 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004674 280.0
BYD3_k127_8524671_2 ABC transporter substrate binding protein K01989 - - 0.00000000000000000000000000000000000000000000000000000000000000002292 235.0
BYD3_k127_855057_0 DNA topological change K03168 - 5.99.1.2 2.169e-291 914.0
BYD3_k127_855057_1 Protein of unknown function (DUF1552) - - - 9.102e-200 632.0
BYD3_k127_855057_2 Ankyrin repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000008357 235.0
BYD3_k127_8576797_0 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K21136 - - 0.000000000000000000000000000000000000000000000000000000000000001079 226.0
BYD3_k127_8576797_1 PFAM Uncharacterised protein family UPF0114 - - - 0.0000000000000000000000000297 115.0
BYD3_k127_8576797_2 Na+/H+ antiporter family - - - 0.000008741 49.0
BYD3_k127_860815_0 Transposase IS116/IS110/IS902 family K07486 - - 0.00000000000000000000000000000000000000000000005264 184.0
BYD3_k127_860815_1 PFAM Transposase IS116 IS110 IS902 family - - - 0.0000000009924 64.0
BYD3_k127_8682724_0 Elongator protein 3, MiaB family, Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000851 353.0
BYD3_k127_8682724_1 PFAM Amidase K02433 - 6.3.5.6,6.3.5.7 0.000000000000000000000000000000000000000000000000000000000000003447 226.0
BYD3_k127_8682724_2 - - - - 0.000000000000072 78.0
BYD3_k127_8682724_3 Rad51 - - - 0.00000000001551 68.0
BYD3_k127_8753031_0 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000005981 174.0
BYD3_k127_8753031_1 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000003213 162.0
BYD3_k127_877601_0 Glycosyl hydrolase 36 superfamily, catalytic domain K13688,K18786 GO:0003674,GO:0003824,GO:0016740,GO:0016757 2.4.1.321 2.779e-298 932.0
BYD3_k127_8792249_0 Nodulation protein S (NodS) - - - 0.00000000000000000000000000002878 123.0
BYD3_k127_8792249_1 Polysaccharide deacetylase - - - 0.000000000000000000000199 111.0
BYD3_k127_8798562_0 Uncharacterized protein family (UPF0051) K09014 - - 3.312e-229 719.0
BYD3_k127_8798562_1 Transcriptional regulator - - - 0.00001655 49.0
BYD3_k127_8815208_0 PhoQ Sensor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001481 444.0
BYD3_k127_8815208_1 - - - - 0.000000001328 67.0
BYD3_k127_8941601_0 DEAD DEAH box K03724 - - 0.0 1798.0
BYD3_k127_8941601_1 PFAM 4-hydroxyphenylacetate 3-hydroxylase K00483 - 1.14.14.9 1.54e-267 833.0
BYD3_k127_8941601_10 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006912 514.0
BYD3_k127_8941601_11 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003409 496.0
BYD3_k127_8941601_12 Short chain fatty acid transporter K02106 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006014 480.0
BYD3_k127_8941601_13 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885,K09698 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 6.1.1.17,6.1.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001294 477.0
BYD3_k127_8941601_14 TIGRFAM SagB-type dehydrogenase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008778 477.0
BYD3_k127_8941601_15 it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins K02314 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004436 469.0
BYD3_k127_8941601_16 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333,K13378 GO:0003674,GO:0003824,GO:0003954,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002912 456.0
BYD3_k127_8941601_17 major facilitator superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001031 423.0
BYD3_k127_8941601_18 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000349 415.0
BYD3_k127_8941601_19 Large family of predicted nucleotide-binding domains - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009979 392.0
BYD3_k127_8941601_2 belongs to the aldehyde dehydrogenase family K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 3.752e-240 749.0
BYD3_k127_8941601_20 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001194 400.0
BYD3_k127_8941601_21 PFAM 6-phosphogluconate dehydrogenase NAD-binding K00020 - 1.1.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007806 370.0
BYD3_k127_8941601_22 PFAM Amidase K01426,K02433 - 3.5.1.4,6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002161 353.0
BYD3_k127_8941601_23 amine dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004466 344.0
BYD3_k127_8941601_24 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002606 337.0
BYD3_k127_8941601_25 Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl- D-erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2- phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4- cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF) K01770,K12506 - 2.7.7.60,4.6.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001217 327.0
BYD3_k127_8941601_26 heat shock protein binding K05516 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005976 319.0
BYD3_k127_8941601_27 Transketolase, thiamine diphosphate binding domain K00161,K21416 - 1.2.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009686 314.0
BYD3_k127_8941601_28 acetylesterase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006636 289.0
BYD3_k127_8941601_29 Catalytic domain of components of various dehydrogenase complexes K00627 - 2.3.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001459 293.0
BYD3_k127_8941601_3 proline dipeptidase activity - - - 6.77e-214 673.0
BYD3_k127_8941601_30 Belongs to the FPG family K05522 - 4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000008426 262.0
BYD3_k127_8941601_31 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775,K18348 - 5.1.1.1,5.1.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000006408 264.0
BYD3_k127_8941601_32 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions K01507 - 3.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000001471 240.0
BYD3_k127_8941601_33 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000001522 238.0
BYD3_k127_8941601_34 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose K03272 GO:0000271,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0006629,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0008713,GO:0008920,GO:0009058,GO:0009059,GO:0009103,GO:0009244,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016301,GO:0016310,GO:0016740,GO:0016757,GO:0016772,GO:0019200,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0046401,GO:0046835,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 2.7.1.167,2.7.7.70 0.000000000000000000000000000000000000000000000000000000000000000001843 239.0
BYD3_k127_8941601_35 Enoyl-(Acyl carrier protein) reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000009347 228.0
BYD3_k127_8941601_36 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03218 GO:0000154,GO:0000451,GO:0000453,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070039,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.185 0.000000000000000000000000000000000000000000000000000000000001231 219.0
BYD3_k127_8941601_37 cheY-homologous receiver domain - - - 0.00000000000000000000000000000000000000000000000000000007307 198.0
BYD3_k127_8941601_38 Cupin domain - - - 0.0000000000000000000000000000000000000000000000000000001716 205.0
BYD3_k127_8941601_39 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000001234 200.0
BYD3_k127_8941601_4 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000339 631.0
BYD3_k127_8941601_40 Protein of unknown function (DUF520) K09767 - - 0.00000000000000000000000000000000000000000000000000001877 194.0
BYD3_k127_8941601_41 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919,K02528,K16924 GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0040007,GO:0044237,GO:0050515 2.1.1.182,2.7.1.148 0.00000000000000000000000000000000000000000000000000137 196.0
BYD3_k127_8941601_42 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 - - 0.000000000000000000000000000000000000000000000000004577 189.0
BYD3_k127_8941601_43 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 - 3.1.1.29 0.0000000000000000000000000000000000000000000000009851 188.0
BYD3_k127_8941601_44 O-Antigen ligase K18814 - - 0.000000000000000000000000000000000000000000002252 180.0
BYD3_k127_8941601_45 PFAM glycosyl transferase family 9 K02843 - - 0.000000000000000000000000000000000000000000002588 178.0
BYD3_k127_8941601_46 Phosphate acyltransferases K00655 - 2.3.1.51 0.000000000000000000000000000000000000000000003344 174.0
BYD3_k127_8941601_47 amine dehydrogenase activity - - - 0.00000000000000000000000000000000000000000004579 177.0
BYD3_k127_8941601_48 binds to the 23S rRNA K02939 - - 0.0000000000000000000000000000000000000001452 155.0
BYD3_k127_8941601_49 Protein of unknown function (DUF1722) - - - 0.00000000000000000000000000000000000001069 151.0
BYD3_k127_8941601_5 NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit K00341 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005584 615.0
BYD3_k127_8941601_50 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 GO:0003674,GO:0003824,GO:0003954,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564 1.6.5.3 0.00000000000000000000000000000000000002766 153.0
BYD3_k127_8941601_51 - - - - 0.0000000000000000000000000000000000007749 152.0
BYD3_k127_8941601_52 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 K00330 - 1.6.5.3 0.000000000000000000000000000000000001839 142.0
BYD3_k127_8941601_53 COG1905 NADH ubiquinone oxidoreductase 24 kD subunit K00334,K03943 - 1.6.5.3,1.6.99.3 0.000000000000000000000000000000000002063 150.0
BYD3_k127_8941601_54 B3/4 domain - - - 0.00000000000000000000000000000000006679 141.0
BYD3_k127_8941601_55 Flavin reductase like domain - - - 0.0000000000000000000000000000000011 138.0
BYD3_k127_8941601_56 - - - - 0.000000000000000000000000000000001504 142.0
BYD3_k127_8941601_57 repeat-containing protein - - - 0.00000000000000000000000000000002374 142.0
BYD3_k127_8941601_58 PFAM NADH-ubiquinone plastoquinone oxidoreductase chain 6 K00339 - 1.6.5.3 0.00000000000000000000000000001247 124.0
BYD3_k127_8941601_59 'Cold-shock' DNA-binding domain K03704 - - 0.0000000000000000000000000001493 117.0
BYD3_k127_8941601_6 proton-translocating NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008368 569.0
BYD3_k127_8941601_60 Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth. GvpA type proteins form the essential core of the structure - - - 0.000000000000000000000000001443 115.0
BYD3_k127_8941601_61 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340,K05576 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016020,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0030964,GO:0032991,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0044425,GO:0044459,GO:0044464,GO:0045271,GO:0045272,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0070469,GO:0070470,GO:0071704,GO:0071944,GO:0072521,GO:0098796,GO:0098797,GO:0098803,GO:1901135,GO:1901360,GO:1901564,GO:1902494,GO:1990204 1.6.5.3 0.00000000000000000000000000243 121.0
BYD3_k127_8941601_62 - - - - 0.0000000000000000000000001111 117.0
BYD3_k127_8941601_63 Gas vesicle protein K - - - 0.0000000000000000000000009235 109.0
BYD3_k127_8941601_64 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 - - 0.00000000000000000000001273 103.0
BYD3_k127_8941601_65 Binds together with S18 to 16S ribosomal RNA K02990 - - 0.00000000000000000000003728 104.0
BYD3_k127_8941601_66 Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth - - - 0.0000000000000000000006243 104.0
BYD3_k127_8941601_67 Trm112p-like protein K00912,K09791 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 2.7.1.130 0.000000000000000003764 85.0
BYD3_k127_8941601_68 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.000000000000000004262 85.0
BYD3_k127_8941601_69 Gas vesicle synthesis protein GvpL/GvpF - - - 0.0000000000000004738 88.0
BYD3_k127_8941601_7 aminopeptidase activity K05994 - 3.4.11.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004016 533.0
BYD3_k127_8941601_70 - - - - 0.0000000000009113 76.0
BYD3_k127_8941601_72 Domain of unknown function (DUF4956) - - - 0.00000009404 62.0
BYD3_k127_8941601_74 gas vesicle protein - - - 0.000007815 54.0
BYD3_k127_8941601_75 gas vesicle protein - - - 0.00003266 51.0
BYD3_k127_8941601_8 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor K21417 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001574 521.0
BYD3_k127_8941601_9 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005642 526.0
BYD3_k127_89694_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.0 1226.0
BYD3_k127_89694_1 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00281,K00283 - 1.4.4.2 0.0 1208.0
BYD3_k127_89694_10 Belongs to the IlvD Edd family K01687 GO:0003674,GO:0003824,GO:0004160,GO:0016829,GO:0016835,GO:0016836 4.2.1.9 4.442e-260 811.0
BYD3_k127_89694_100 Belongs to the 'phage' integrase family K04763 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001567 292.0
BYD3_k127_89694_101 type II secretion system K02653 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000348 293.0
BYD3_k127_89694_102 PFAM phosphoesterase, RecJ domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004365 288.0
BYD3_k127_89694_103 Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate K07106 - 4.2.1.126 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001863 275.0
BYD3_k127_89694_104 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA K03500 - 2.1.1.176 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004077 282.0
BYD3_k127_89694_105 Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine cysteine desulfurase (IscS) system K14058 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003298 270.0
BYD3_k127_89694_106 Belongs to the 'phage' integrase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006104 278.0
BYD3_k127_89694_107 PFAM glutamine amidotransferase class-I K01658 - 4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000002412 262.0
BYD3_k127_89694_108 Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate K01619 - 4.1.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000004302 272.0
BYD3_k127_89694_109 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000029 265.0
BYD3_k127_89694_11 Uncharacterised protein family (UPF0182) K09118 - - 2.799e-254 812.0
BYD3_k127_89694_110 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001983 266.0
BYD3_k127_89694_111 Glycosyltransferase like family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002253 265.0
BYD3_k127_89694_112 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 - 3.4.21.88 0.000000000000000000000000000000000000000000000000000000000000000000000000009403 257.0
BYD3_k127_89694_113 TolB amino-terminal domain K03641 GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006810,GO:0008104,GO:0008150,GO:0009719,GO:0009987,GO:0010033,GO:0010243,GO:0015031,GO:0015833,GO:0015893,GO:0017038,GO:0019534,GO:0019904,GO:0022857,GO:0030288,GO:0030313,GO:0031975,GO:0032153,GO:0032991,GO:0033036,GO:0042221,GO:0042493,GO:0042597,GO:0042886,GO:0042891,GO:0043213,GO:0044464,GO:0044877,GO:0045184,GO:0046677,GO:0046678,GO:0050896,GO:0051179,GO:0051234,GO:0051716,GO:0055085,GO:0070887,GO:0071236,GO:0071237,GO:0071310,GO:0071417,GO:0071495,GO:0071702,GO:0071705,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1901998 - 0.00000000000000000000000000000000000000000000000000000000000000000000000006459 270.0
BYD3_k127_89694_114 Ami_3 K01448 - 3.5.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000000001964 269.0
BYD3_k127_89694_115 COGs COG5616 integral membrane protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001026 272.0
BYD3_k127_89694_116 carboxymethylenebutenolidase activity K01061 - 3.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000001137 251.0
BYD3_k127_89694_117 Belongs to the MlaE permease family K02066 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002554 252.0
BYD3_k127_89694_118 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000007926 260.0
BYD3_k127_89694_119 Beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000008163 257.0
BYD3_k127_89694_12 MutS domain I K03555 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 1.46e-253 809.0
BYD3_k127_89694_120 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000101 271.0
BYD3_k127_89694_121 Glucosamine-6-phosphate deaminase K02564 - 3.5.99.6 0.00000000000000000000000000000000000000000000000000000000000000000000003598 256.0
BYD3_k127_89694_122 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000002873 248.0
BYD3_k127_89694_123 Inositol monophosphatase family K01092 - 3.1.3.25 0.0000000000000000000000000000000000000000000000000000000000000000000008817 245.0
BYD3_k127_89694_124 Shikimate dehydrogenase substrate binding domain K13832 - 1.1.1.25,4.2.1.10 0.000000000000000000000000000000000000000000000000000000000000000000001367 256.0
BYD3_k127_89694_125 Sigma-54 interaction domain K07713,K07714 - - 0.0000000000000000000000000000000000000000000000000000000000000000002184 259.0
BYD3_k127_89694_126 response regulator K02481,K07715 - - 0.0000000000000000000000000000000000000000000000000000000000000000006637 246.0
BYD3_k127_89694_127 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000006725 238.0
BYD3_k127_89694_128 serine-type endopeptidase activity K04771 - 3.4.21.107 0.00000000000000000000000000000000000000000000000000000000000000001518 235.0
BYD3_k127_89694_129 ABC transporter K02065 - - 0.00000000000000000000000000000000000000000000000000000000000000004338 243.0
BYD3_k127_89694_13 Cytochrome c-type biogenesis protein K02198 - - 1.859e-236 756.0
BYD3_k127_89694_130 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis K00759 - 2.4.2.7 0.0000000000000000000000000000000000000000000000000000000000000002822 224.0
BYD3_k127_89694_131 Belongs to the TrpC family K01609 GO:0003674,GO:0003824,GO:0004425,GO:0016829,GO:0016830,GO:0016831 4.1.1.48 0.000000000000000000000000000000000000000000000000000000000000006892 226.0
BYD3_k127_89694_132 Peptidase family M48 - - - 0.00000000000000000000000000000000000000000000000000000000000001818 234.0
BYD3_k127_89694_133 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0030312,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:0140097,GO:1901360,GO:1901363 4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000002047 222.0
BYD3_k127_89694_134 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.000000000000000000000000000000000000000000000000000000000002918 218.0
BYD3_k127_89694_135 Calcineurin-like phosphoesterase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000000003417 216.0
BYD3_k127_89694_136 Hydrolase, TatD family K03424 - - 0.00000000000000000000000000000000000000000000000000000000001936 218.0
BYD3_k127_89694_137 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02194 - - 0.0000000000000000000000000000000000000000000000000000000001386 211.0
BYD3_k127_89694_138 Bifunctional nuclease K03617,K08999 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0016020,GO:0030312,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000003359 211.0
BYD3_k127_89694_139 YCII-related domain - - - 0.0000000000000000000000000000000000000000000000000000000005245 208.0
BYD3_k127_89694_14 PFAM Type II secretion system protein E K02652 - - 1.513e-227 718.0
BYD3_k127_89694_140 chromosome segregation K03497 - - 0.0000000000000000000000000000000000000000000000000000001255 209.0
BYD3_k127_89694_141 Belongs to the UPF0758 family K03630 - - 0.0000000000000000000000000000000000000000000000000000001571 205.0
BYD3_k127_89694_142 Belongs to the TrpF family K01817 - 5.3.1.24 0.0000000000000000000000000000000000000000000000000000001574 201.0
BYD3_k127_89694_143 Uracil phosphoribosyltransferase K00761 - 2.4.2.9 0.0000000000000000000000000000000000000000000000000000003893 213.0
BYD3_k127_89694_144 Mediates influx of magnesium ions K03284 - - 0.0000000000000000000000000000000000000000000000000000005469 204.0
BYD3_k127_89694_145 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.0000000000000000000000000000000000000000000000000000008252 197.0
BYD3_k127_89694_146 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 4.1.1.65 0.000000000000000000000000000000000000000000000000000001701 198.0
BYD3_k127_89694_147 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 GO:0000028,GO:0000154,GO:0000179,GO:0001510,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003723,GO:0003729,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0031167,GO:0032259,GO:0034470,GO:0034622,GO:0034641,GO:0034660,GO:0042254,GO:0042255,GO:0042274,GO:0043170,GO:0043412,GO:0043414,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0065003,GO:0070475,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:0140098,GO:0140102,GO:1901360,GO:1901363 2.1.1.182 0.000000000000000000000000000000000000000000000000000002915 200.0
BYD3_k127_89694_148 Belongs to the purine pyrimidine phosphoribosyltransferase family K00760 - 2.4.2.8 0.00000000000000000000000000000000000000000000000000001048 197.0
BYD3_k127_89694_149 Acetolactate synthase, small subunit K01653 - 2.2.1.6 0.0000000000000000000000000000000000000000000000000002014 191.0
BYD3_k127_89694_15 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 3.246e-225 714.0
BYD3_k127_89694_150 Acetyltransferase (GNAT) domain K03790 - 2.3.1.128 0.0000000000000000000000000000000000000000000000000003611 191.0
BYD3_k127_89694_151 - - - - 0.000000000000000000000000000000000000000000000000000363 197.0
BYD3_k127_89694_152 peptidase - - - 0.000000000000000000000000000000000000000000000000002272 198.0
BYD3_k127_89694_153 PFAM PpiC-type peptidyl-prolyl cis-trans isomerase K03769 - 5.2.1.8 0.000000000000000000000000000000000000000000000000002595 196.0
BYD3_k127_89694_154 Disulphide isomerase - - - 0.000000000000000000000000000000000000000000000000007211 184.0
BYD3_k127_89694_155 MotA TolQ ExbB proton channel K03562 - - 0.00000000000000000000000000000000000000000000000001279 189.0
BYD3_k127_89694_156 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.0000000000000000000000000000000000000000000000009452 194.0
BYD3_k127_89694_157 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.000000000000000000000000000000000000000000000002308 185.0
BYD3_k127_89694_158 Cytochrome C assembly protein K02195 - - 0.00000000000000000000000000000000000000000000000436 179.0
BYD3_k127_89694_159 BadF BadG BcrA BcrD K00884,K02616 - 2.7.1.59 0.000000000000000000000000000000000000000000000006907 185.0
BYD3_k127_89694_16 Carboxypeptidase regulatory-like domain - - - 1.239e-213 702.0
BYD3_k127_89694_160 Maf-like protein K06287 - - 0.00000000000000000000000000000000000000000000001328 177.0
BYD3_k127_89694_161 D-Tyr-tRNA(Tyr) deacylase K07560 - - 0.00000000000000000000000000000000000000000000001835 174.0
BYD3_k127_89694_162 WYL domain - - - 0.00000000000000000000000000000000000000000000002946 183.0
BYD3_k127_89694_163 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.00000000000000000000000000000000000000000000004907 180.0
BYD3_k127_89694_164 Beta-lactamase - - - 0.00000000000000000000000000000000000000000000005164 182.0
BYD3_k127_89694_165 Histidine kinase K13598 - 2.7.13.3 0.0000000000000000000000000000000000000000000001234 195.0
BYD3_k127_89694_166 PFAM Mammalian cell entry related domain protein K02067 - - 0.0000000000000000000000000000000000000000000006136 179.0
BYD3_k127_89694_167 Outer membrane lipoprotein K05807,K08309 GO:0005575,GO:0005623,GO:0008104,GO:0008150,GO:0009279,GO:0009987,GO:0016020,GO:0016043,GO:0019867,GO:0022607,GO:0030312,GO:0030313,GO:0031224,GO:0031230,GO:0031241,GO:0031246,GO:0031975,GO:0032991,GO:0033036,GO:0034613,GO:0043163,GO:0043165,GO:0044085,GO:0044091,GO:0044425,GO:0044462,GO:0044464,GO:0045184,GO:0045229,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0061024,GO:0070727,GO:0071709,GO:0071840,GO:0071944,GO:0072657,GO:0090150,GO:0098552,GO:0098796,GO:1990063 - 0.00000000000000000000000000000000000000000001351 171.0
BYD3_k127_89694_168 PFAM Integral membrane protein TerC - - - 0.00000000000000000000000000000000000000000001525 171.0
BYD3_k127_89694_169 Mannose-6-phosphate isomerase - - - 0.00000000000000000000000000000000000000000001717 164.0
BYD3_k127_89694_17 Catalyzes the synthesis of GMP from XMP K01951 GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.5.2 2.781e-203 647.0
BYD3_k127_89694_170 Prokaryotic N-terminal methylation motif K02456 - - 0.00000000000000000000000000000000000000000002093 172.0
BYD3_k127_89694_171 ABC transporter K02193 - 3.6.3.41 0.00000000000000000000000000000000000000000005399 177.0
BYD3_k127_89694_172 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995 - 2.7.8.5 0.00000000000000000000000000000000000000000005548 167.0
BYD3_k127_89694_173 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.0000000000000000000000000000000000000000002025 163.0
BYD3_k127_89694_174 Polysaccharide deacetylase - - - 0.0000000000000000000000000000000000000000003214 172.0
BYD3_k127_89694_175 Prephenate dehydrogenase K04517 - 1.3.1.12 0.000000000000000000000000000000000000000001049 168.0
BYD3_k127_89694_176 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.0000000000000000000000000000000000000002534 166.0
BYD3_k127_89694_177 PFAM peptidase - - - 0.0000000000000000000000000000000000000003573 162.0
BYD3_k127_89694_178 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.000000000000000000000000000000000000002577 150.0
BYD3_k127_89694_179 ethanolamine catabolic process K04027 - - 0.00000000000000000000000000000000000001699 146.0
BYD3_k127_89694_18 breast cancer carboxy-terminal domain K01972 GO:0003674,GO:0003824,GO:0003909,GO:0003911,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016874,GO:0016886,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 6.5.1.2 1.91e-200 649.0
BYD3_k127_89694_180 Conserved hypothetical protein 95 - - - 0.0000000000000000000000000000000000002973 148.0
BYD3_k127_89694_181 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.00000000000000000000000000000000002004 149.0
BYD3_k127_89694_182 PFAM PTS system fructose subfamily IIA component K02793 - 2.7.1.191 0.0000000000000000000000000000000004276 137.0
BYD3_k127_89694_183 Psort location Cytoplasmic, score 8.96 K01808 - 5.3.1.6 0.00000000000000000000000000000000159 137.0
BYD3_k127_89694_184 This enzyme acetylates the N-terminal alanine of ribosomal protein S18 K03789 - 2.3.1.128 0.000000000000000000000000000000002539 134.0
BYD3_k127_89694_185 von Willebrand factor, type A - - - 0.000000000000000000000000000000004483 140.0
BYD3_k127_89694_186 PFAM OmpA MotB domain protein K03640 - - 0.000000000000000000000000000000007516 136.0
BYD3_k127_89694_187 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000001267 135.0
BYD3_k127_89694_188 CoA-binding protein K06929 - - 0.00000000000000000000000000000001312 130.0
BYD3_k127_89694_19 Multicopper oxidase - - - 2.156e-199 646.0
BYD3_k127_89694_190 Glycoprotease family K01409,K14742 - 2.3.1.234 0.00000000000000000000000000000002042 135.0
BYD3_k127_89694_191 Thioesterase-like superfamily K07107 - - 0.0000000000000000000000000000006106 135.0
BYD3_k127_89694_192 Prokaryotic N-terminal methylation motif K02456 - - 0.0000000000000000000000000000008088 127.0
BYD3_k127_89694_193 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03437 - - 0.00000000000000000000000000000463 131.0
BYD3_k127_89694_194 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 GO:0000287,GO:0003674,GO:0003824,GO:0004765,GO:0005488,GO:0006082,GO:0006520,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019438,GO:0019632,GO:0019752,GO:0032787,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046872,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615 2.7.1.71 0.00000000000000000000000000002328 124.0
BYD3_k127_89694_195 Histidine kinase-like ATPase domain K04757 - 2.7.11.1 0.00000000000000000000000000003246 123.0
BYD3_k127_89694_196 Zincin-like metallopeptidase K00930 - 2.7.2.8 0.00000000000000000000000000008462 124.0
BYD3_k127_89694_197 Threonylcarbamoyl adenosine biosynthesis protein TsaE K06925 - - 0.000000000000000000000000001394 117.0
BYD3_k127_89694_198 Domain of unknown function (DUF4399) - - - 0.000000000000000000000000006018 117.0
BYD3_k127_89694_199 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.00000000000000000000000003584 123.0
BYD3_k127_89694_2 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0 1167.0
BYD3_k127_89694_20 Belongs to the DEAD box helicase family K05592 - 3.6.4.13 2.955e-198 631.0
BYD3_k127_89694_200 Involved in DNA repair and RecF pathway recombination K03584 - - 0.000000000000000000000009803 109.0
BYD3_k127_89694_201 helix_turn_helix, mercury resistance K13640 - - 0.00000000000000000000003057 103.0
BYD3_k127_89694_202 PASTA domain K12132 - 2.7.11.1 0.0000000000000000000000326 108.0
BYD3_k127_89694_203 PFAM SNARE associated Golgi protein - - - 0.00000000000000000000003934 107.0
BYD3_k127_89694_204 protocatechuate 3,4-dioxygenase - - - 0.00000000000000000000005293 114.0
BYD3_k127_89694_205 Biopolymer transport protein K03559,K03560 - - 0.000000000000000000001732 100.0
BYD3_k127_89694_206 Belongs to the acylphosphatase family K01512 GO:0003674,GO:0003824,GO:0003998,GO:0016787,GO:0016817,GO:0016818 3.6.1.7 0.000000000000000000003311 95.0
BYD3_k127_89694_207 Phosphotransferase System K11189 - - 0.0000000000000000000036 96.0
BYD3_k127_89694_208 Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase K05808 - - 0.000000000000000000004147 101.0
BYD3_k127_89694_209 Chorismate mutase type II K03856,K04092,K04093,K04516,K13853 - 2.5.1.54,5.4.99.5 0.0000000000000000001709 96.0
BYD3_k127_89694_21 Ftsk_gamma K03466 - - 1.118e-194 632.0
BYD3_k127_89694_211 PFAM Iron sulphur-containing domain, CDGSH-type - - - 0.000000000000000001244 88.0
BYD3_k127_89694_212 Pilus assembly protein K02662 - - 0.000000000000000002043 96.0
BYD3_k127_89694_213 DinB family - - - 0.000000000000000003107 93.0
BYD3_k127_89694_214 competence protein ComEA helix-hairpin-helix repeat protein K02237 - - 0.00000000000000001312 86.0
BYD3_k127_89694_215 metal-dependent protease of the PAD1 JAB1 superfamily - - - 0.0000000000000000685 86.0
BYD3_k127_89694_216 lipopolysaccharide transport K09774 - - 0.0000000000000001152 94.0
BYD3_k127_89694_217 Response regulator receiver - - - 0.000000000000000236 83.0
BYD3_k127_89694_218 helix_turn_helix, Lux Regulon - - - 0.000000000000001904 81.0
BYD3_k127_89694_219 Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH K02197 - - 0.000000000000009139 81.0
BYD3_k127_89694_22 Major facilitator superfamily K08218 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000127 626.0
BYD3_k127_89694_220 PFAM phosphoesterase, PA-phosphatase related - - - 0.0000000000000122 88.0
BYD3_k127_89694_221 general secretion pathway protein K02456,K02650 - - 0.00000000000001756 83.0
BYD3_k127_89694_222 Pyrrolo-quinoline quinone - - - 0.00000000000002402 86.0
BYD3_k127_89694_223 - - - - 0.00000000000002694 78.0
BYD3_k127_89694_224 Heavy metal transport detoxification protein K01533,K17686,K19597 - 3.6.3.4,3.6.3.54 0.0000000000005674 83.0
BYD3_k127_89694_225 Belongs to the HSP15 family K04762 - - 0.000000000003967 73.0
BYD3_k127_89694_226 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.000000000005563 76.0
BYD3_k127_89694_229 - - - - 0.0000000003878 70.0
BYD3_k127_89694_23 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000186 619.0
BYD3_k127_89694_230 - - - - 0.0000000004603 70.0
BYD3_k127_89694_232 - - - - 0.000000001469 70.0
BYD3_k127_89694_233 TIGRFAM TonB family K03832 - - 0.00000001318 65.0
BYD3_k127_89694_234 Tetratricopeptide repeat - - - 0.00000001586 66.0
BYD3_k127_89694_235 serine-type endopeptidase activity K04771 - 3.4.21.107 0.00000001979 65.0
BYD3_k127_89694_236 COG2335, Secreted and surface protein containing fasciclin-like repeats - - - 0.00000008343 59.0
BYD3_k127_89694_237 TIGRFAM efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family - - - 0.0000001262 64.0
BYD3_k127_89694_238 - - - - 0.000000171 63.0
BYD3_k127_89694_239 Peptidoglycan-binding LysM - - - 0.0000002506 61.0
BYD3_k127_89694_24 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 GO:0003674,GO:0003824,GO:0004812,GO:0004825,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006431,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003836 608.0
BYD3_k127_89694_240 Pilus assembly protein, PilO K02664 - - 0.000001053 58.0
BYD3_k127_89694_242 - - - - 0.00001451 55.0
BYD3_k127_89694_243 Domain of unknown function (DUF4398) - - - 0.00003698 55.0
BYD3_k127_89694_244 Domain of unknown function (DUF4390) - - - 0.00003862 53.0
BYD3_k127_89694_245 Belongs to the phycobilisome linker protein family K02096 GO:0005575,GO:0005622,GO:0005623,GO:0009579,GO:0016020,GO:0034357,GO:0042651,GO:0044424,GO:0044436,GO:0044464 - 0.00005656 55.0
BYD3_k127_89694_246 PFAM Fimbrial assembly family protein K02663 - - 0.00005705 54.0
BYD3_k127_89694_247 Tetratricopeptide repeat - - - 0.0001924 52.0
BYD3_k127_89694_248 Protein of unknown function (DUF465) K09794 - - 0.0002039 47.0
BYD3_k127_89694_249 protein contain chitin-binding domain type 3 K01183,K21606 - 3.2.1.14,3.2.1.202 0.0002117 53.0
BYD3_k127_89694_25 Dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001506 612.0
BYD3_k127_89694_250 - - - - 0.0002117 51.0
BYD3_k127_89694_251 Coiled-coil domain containing 186 - GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005794,GO:0005802,GO:0006996,GO:0008150,GO:0009987,GO:0010256,GO:0012505,GO:0016043,GO:0016050,GO:0017016,GO:0017137,GO:0019899,GO:0021700,GO:0030424,GO:0031267,GO:0031984,GO:0032502,GO:0033363,GO:0036477,GO:0040012,GO:0042995,GO:0043005,GO:0043025,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044297,GO:0044422,GO:0044424,GO:0044431,GO:0044444,GO:0044446,GO:0044464,GO:0048471,GO:0050789,GO:0050795,GO:0051020,GO:0061792,GO:0065007,GO:0071840,GO:0090325,GO:0097458,GO:0098791,GO:0120025,GO:1990502 - 0.0003582 54.0
BYD3_k127_89694_252 - - - - 0.0008316 44.0
BYD3_k127_89694_253 Putative zinc-finger - - - 0.0009509 51.0
BYD3_k127_89694_26 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008428 578.0
BYD3_k127_89694_27 transmembrane transport K13893 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002907 583.0
BYD3_k127_89694_28 An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay K12574 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009907 576.0
BYD3_k127_89694_29 PFAM magnesium chelatase ChlI subunit K07391 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000121 548.0
BYD3_k127_89694_3 DNA-directed DNA polymerase K02337 - 2.7.7.7 0.0 1112.0
BYD3_k127_89694_30 Glycosyl hydrolase family 57 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005212 550.0
BYD3_k127_89694_31 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 - 4.2.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002081 520.0
BYD3_k127_89694_32 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009196 509.0
BYD3_k127_89694_33 PA domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005462 518.0
BYD3_k127_89694_34 Rieske [2Fe-2S] domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000074 510.0
BYD3_k127_89694_35 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007427 507.0
BYD3_k127_89694_36 MgsA AAA+ ATPase C terminal K07478 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001123 505.0
BYD3_k127_89694_37 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657,K13503 - 4.1.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001235 505.0
BYD3_k127_89694_38 COGs COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains K13599 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006044 497.0
BYD3_k127_89694_39 TIGRFAM acetaldehyde dehydrogenase (acetylating) K00132 - 1.2.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001606 503.0
BYD3_k127_89694_4 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 0.0 1098.0
BYD3_k127_89694_40 Peptidase dimerisation domain K13049 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005581 492.0
BYD3_k127_89694_41 Belongs to the thiolase family K00626 - 2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002118 485.0
BYD3_k127_89694_42 phosphoglucomutase phosphomannomutase alpha beta alpha domain I K01840 - 5.4.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001162 481.0
BYD3_k127_89694_43 exonuclease K07462 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009807 466.0
BYD3_k127_89694_44 NeuB family K03856 - 2.5.1.54 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003585 455.0
BYD3_k127_89694_45 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008588 452.0
BYD3_k127_89694_46 PFAM FAD linked oxidase domain protein K00104 - 1.1.3.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002109 449.0
BYD3_k127_89694_47 PA domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002264 445.0
BYD3_k127_89694_48 lysine biosynthetic process via aminoadipic acid - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001242 458.0
BYD3_k127_89694_49 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003848 454.0
BYD3_k127_89694_5 PEP-utilising enzyme, mobile domain K01006 - 2.7.9.1 0.0 1050.0
BYD3_k127_89694_50 Amidohydrolase family K12960 - 3.5.4.28,3.5.4.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001659 446.0
BYD3_k127_89694_51 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001603 443.0
BYD3_k127_89694_52 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001685 430.0
BYD3_k127_89694_53 May be involved in recombinational repair of damaged DNA K03631 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008818 430.0
BYD3_k127_89694_54 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03092 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009291 417.0
BYD3_k127_89694_55 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002525 428.0
BYD3_k127_89694_56 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K01007,K08483 - 2.7.3.9,2.7.9.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002061 416.0
BYD3_k127_89694_57 Cys/Met metabolism PLP-dependent enzyme K01758 - 4.4.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002123 407.0
BYD3_k127_89694_58 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000493 407.0
BYD3_k127_89694_6 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 3.576e-288 899.0
BYD3_k127_89694_60 ABC transporter (Permease) K02033,K13894 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000139 400.0
BYD3_k127_89694_61 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 GO:0003674,GO:0003824,GO:0016829,GO:0016835,GO:0016836,GO:0016853,GO:0016854,GO:0052855,GO:0052856,GO:0052857 4.2.1.136,5.1.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001772 408.0
BYD3_k127_89694_62 Glycogen debranching enzyme N terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009083 391.0
BYD3_k127_89694_63 TIGRFAM oligopeptide dipeptide ABC transporter, ATP-binding protein, C-terminal domain K02031,K02032,K15583 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009922 393.0
BYD3_k127_89694_64 microcin transport K13895 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006086 397.0
BYD3_k127_89694_65 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001555 392.0
BYD3_k127_89694_66 Polysaccharide biosynthesis protein K01784,K02473 - 5.1.3.2,5.1.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002855 385.0
BYD3_k127_89694_67 Permease YjgP YjgQ family protein K07091,K11720 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003977 405.0
BYD3_k127_89694_68 Polysaccharide biosynthesis protein K01784,K08679 - 5.1.3.2,5.1.3.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004323 378.0
BYD3_k127_89694_69 glycyl-tRNA synthetase alpha subunit K01878 - 6.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000795 374.0
BYD3_k127_89694_7 ABC transporter K06158 GO:0006950,GO:0008150,GO:0009266,GO:0009409,GO:0009628,GO:0050896 - 2.073e-281 872.0
BYD3_k127_89694_70 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001162 393.0
BYD3_k127_89694_71 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002401 377.0
BYD3_k127_89694_72 nitrogen compound transport K02033 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004766 355.0
BYD3_k127_89694_73 Aminotransferase class-V K00830 - 2.6.1.44,2.6.1.45,2.6.1.51 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006461 353.0
BYD3_k127_89694_74 TIGRFAM oligopeptide dipeptide ABC transporter, ATP-binding protein, C-terminal domain K02032,K10823 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001451 348.0
BYD3_k127_89694_75 Aminotransferase K00812 - 2.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002857 352.0
BYD3_k127_89694_76 cytochrome K17230 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001212 349.0
BYD3_k127_89694_77 lipopolysaccharide transport protein B ATP-binding component of ABC superfamily K01990,K06861 GO:0003674,GO:0003824,GO:0005215,GO:0005319,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006869,GO:0008150,GO:0010876,GO:0015221,GO:0015399,GO:0015405,GO:0015437,GO:0015920,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0031224,GO:0032991,GO:0033036,GO:0034040,GO:0042623,GO:0042626,GO:0043190,GO:0043492,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944,GO:0098533,GO:0098796,GO:0098797,GO:1901264,GO:1901505,GO:1902494,GO:1902495,GO:1904949,GO:1990351 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001225 345.0
BYD3_k127_89694_78 Transglycosylase K05366 - 2.4.1.129,3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002374 363.0
BYD3_k127_89694_79 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006249 352.0
BYD3_k127_89694_8 Thiamine pyrophosphate protein TPP binding domain protein K01652 - 2.2.1.6 5.857e-278 863.0
BYD3_k127_89694_80 SpoIVB peptidase S55 K00973,K02414,K21449 - 2.7.7.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000109 357.0
BYD3_k127_89694_81 Trypsin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003321 352.0
BYD3_k127_89694_82 Protein of unknown function DUF111 K09121 - 4.99.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005642 348.0
BYD3_k127_89694_83 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962,K01963 - 2.1.3.15,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007632 340.0
BYD3_k127_89694_84 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766,K13497 GO:0000162,GO:0003674,GO:0003824,GO:0004048,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.18,4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001526 333.0
BYD3_k127_89694_85 Acts as a magnesium transporter K03281,K04767,K06213,K15986 GO:0000287,GO:0003674,GO:0005488,GO:0005515,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0015693,GO:0030001,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0046872,GO:0046983,GO:0051179,GO:0051234,GO:0070838,GO:0072511 3.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003487 329.0
BYD3_k127_89694_86 Lysin motif K08307 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001058 334.0
BYD3_k127_89694_87 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005728 329.0
BYD3_k127_89694_88 Type ii and iii secretion system protein K02453 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001664 342.0
BYD3_k127_89694_89 PFAM Aminotransferase class I and II K05825 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001859 324.0
BYD3_k127_89694_9 AMP-binding enzyme C-terminal domain K01895 - 6.2.1.1 1.201e-273 856.0
BYD3_k127_89694_90 DnaJ molecular chaperone homology domain K05516 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002026 314.0
BYD3_k127_89694_91 PFAM binding-protein-dependent transport systems inner membrane component K02034 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009276 305.0
BYD3_k127_89694_92 Na( ) H( ) antiporter that extrudes sodium in exchange for external protons K03313 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003196 316.0
BYD3_k127_89694_93 Belongs to the FPP GGPP synthase family K02523,K13789 - 2.5.1.1,2.5.1.10,2.5.1.29,2.5.1.90 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009642 300.0
BYD3_k127_89694_94 Cobyrinic acid ac-diamide synthase K03496 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001115 297.0
BYD3_k127_89694_95 Displays ATPase and GTPase activities K06958 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001325 300.0
BYD3_k127_89694_96 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001456 303.0
BYD3_k127_89694_97 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 GO:0003674,GO:0003824,GO:0004479,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006413,GO:0006464,GO:0006518,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0016742,GO:0019538,GO:0019988,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036211,GO:0043043,GO:0043170,GO:0043412,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0046483,GO:0071704,GO:0071951,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.1.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001815 301.0
BYD3_k127_89694_98 Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr) K06023 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001746 296.0
BYD3_k127_89694_99 Nucleotidyl transferase K00966 - 2.7.7.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002651 304.0
BYD3_k127_902377_0 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004743 646.0
BYD3_k127_902377_1 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.00000000000000000000000000000000000000002952 166.0
BYD3_k127_902377_2 - - - - 0.0000000000000000000000000005489 125.0
BYD3_k127_902377_3 Phosphatidylethanolamine-binding protein - - - 0.0000000000000000000000000009918 123.0
BYD3_k127_902377_4 - - - - 0.000000002129 64.0
BYD3_k127_902377_5 - - - - 0.000004515 57.0
BYD3_k127_902377_7 lysine biosynthetic process via aminoadipic acid - - - 0.00002136 52.0
BYD3_k127_9027194_0 Integrase core domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009661 370.0
BYD3_k127_9027194_1 Putative transposase of IS4/5 family (DUF4096) - - - 0.000000000000000000000000000000000000006069 146.0
BYD3_k127_9027194_2 - - - - 0.0000000000000000000000000000000001878 137.0
BYD3_k127_9027194_3 Type I restriction-modification system methyltransferase subunit() K03427 - 2.1.1.72 0.00000000000003838 78.0
BYD3_k127_9048511_0 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE K11893 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002721 487.0
BYD3_k127_9048511_1 TIGRFAM type VI secretion lipoprotein, VC_A0113 family K11906 - - 0.00000223 53.0
BYD3_k127_9061602_0 Transposase (IS116 IS110 IS902 family) - - - 0.0000000000000000000000000000000000000000000000000000000009801 215.0
BYD3_k127_9061602_1 nucleotidyltransferase activity - - - 0.00000000000000000000000000000000000000000000616 171.0
BYD3_k127_9061602_10 transport - - - 0.000007661 58.0
BYD3_k127_9061602_11 - - - - 0.000228 52.0
BYD3_k127_9061602_2 Toxic component of a toxin-antitoxin (TA) module K07171 - - 0.00000000000000000000000000000000002892 139.0
BYD3_k127_9061602_3 TIGRFAM death-on-curing family protein K07341 - - 0.0000000000000000000000000000000005255 136.0
BYD3_k127_9061602_4 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.0000000000000000000002538 104.0
BYD3_k127_9061602_5 - - - - 0.000000000000003184 84.0
BYD3_k127_9061602_6 Transcriptional regulator - - - 0.00000000000001289 79.0
BYD3_k127_9061602_7 PFAM SpoVT AbrB K07172,K18842 - - 0.00000000000005435 76.0
BYD3_k127_9061602_8 - - - - 0.00000000002526 72.0
BYD3_k127_9061602_9 Sel1-like repeats. K07126 - - 0.000001433 61.0
BYD3_k127_93671_0 Beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005308 482.0
BYD3_k127_93671_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002797 381.0