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Overview

ID MAG00137
Name BYD3_bin.55
Sample SMP0003
Taxonomy
Kingdom Bacteria
Phylum Pseudomonadota
Class Gammaproteobacteria
Order Steroidobacterales
Family Steroidobacteraceae
Genus CADEEJ01
Species
Assembly information
Completeness (%) 60.81
Contamination (%) 1.44
GC content (%) 65.0
N50 (bp) 3,997
Genome size (bp) 4,007,736

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes4177

Gene name Description KEGG GOs EC E-value Score Sequence
BYD3_k127_1006412_0 Cardiolipin synthase K06132 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007683 569.0
BYD3_k127_1006412_1 Belongs to the ompA family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002793 374.0
BYD3_k127_1006412_2 hydrolase activity, acting on ester bonds - - - 0.00000000000000000000000000000000000000000000000000000071 209.0
BYD3_k127_1006412_3 Peptidase family M48 - - - 0.000000000000000000000004016 108.0
BYD3_k127_1006412_4 N-acetylglucosaminylinositol deacetylase activity - - - 0.00000000000000000005391 94.0
BYD3_k127_1006412_5 Bacterial regulatory helix-turn-helix protein, lysR family - - - 0.0000000000000000003761 100.0
BYD3_k127_1006823_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002275 389.0
BYD3_k127_1006823_1 TonB dependent receptor K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000811 306.0
BYD3_k127_1007712_0 DNA ligase K01971 - 6.5.1.1 2.292e-207 655.0
BYD3_k127_1007712_1 Subtilase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004008 349.0
BYD3_k127_1007712_2 COG1502 Phosphatidylserine phosphatidylglycerophosphate cardiolipi n synthases and related enzymes - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004357 333.0
BYD3_k127_1007712_3 Sigma-70, region 4 - - - 0.00000000000000000000000000000000000000000000000000000005069 201.0
BYD3_k127_1007712_4 Cysteine-rich secretory protein family - - - 0.00000000000000000000000000000000000000000000000000001557 198.0
BYD3_k127_1007712_5 AntiSigma factor - - - 0.000000000000000000000000000000000000000000001146 176.0
BYD3_k127_1018105_0 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K00175 - 1.2.7.11,1.2.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005694 475.0
BYD3_k127_1018105_1 RES - - - 0.0000000000000000000004606 97.0
BYD3_k127_1022216_0 Transcriptional regulator K03566 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008674 287.0
BYD3_k127_1022216_1 LysE type translocator - - - 0.000000000000000000000000000000000000000000000000000000000000000004715 231.0
BYD3_k127_1022216_2 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000000000000000000006495 208.0
BYD3_k127_1022216_3 Cys/Met metabolism PLP-dependent enzyme K01739 - 2.5.1.48 0.00000000000000000000000000000000000000000000000000000002707 199.0
BYD3_k127_1022216_4 endopeptidase activity - - - 0.0000000000000000000000000002929 132.0
BYD3_k127_1022216_5 Belongs to the glycosyl hydrolase 13 family K01200 - 3.2.1.41 0.00004415 57.0
BYD3_k127_1023552_0 Glutathione-dependent formaldehyde-activating enzyme - - - 0.0000000000000000000000000000000000000000000000000000001053 198.0
BYD3_k127_1023552_1 Thioesterase-like superfamily - - - 0.000000000000000000000000000000000000000000000000000102 194.0
BYD3_k127_1023552_2 Bacterial transcription activator, effector binding domain - - - 0.00000000000000000000002633 106.0
BYD3_k127_1039093_0 Helix-turn-helix XRE-family like proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001439 328.0
BYD3_k127_1039093_1 Thioesterase-like superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006097 295.0
BYD3_k127_1043727_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 1.72e-311 975.0
BYD3_k127_1043727_1 OmpA-like transmembrane domain - - - 0.00000000000000000000000000000005967 132.0
BYD3_k127_1049915_0 Protein of unknown function - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001843 344.0
BYD3_k127_1049915_1 TIGRFAM ribonuclease, Rne Rng family K08301 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004161 248.0
BYD3_k127_1059372_0 - - - - 0.000000000000000000000000000009149 131.0
BYD3_k127_1059372_1 Transmembrane secretion effector - - - 0.0000000000000000000000000001249 119.0
BYD3_k127_1059372_2 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.0000000000000000000000000001365 122.0
BYD3_k127_1059372_3 HEAT repeats - - - 0.00000000000006218 80.0
BYD3_k127_1060637_0 Belongs to the ABC transporter superfamily K10112 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005517 444.0
BYD3_k127_1060637_1 COG2723 Beta-glucosidase 6-phospho-beta-glucosidase beta- galactosidase K05350 - 3.2.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007585 408.0
BYD3_k127_1060637_2 COG0457 FOG TPR repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001054 377.0
BYD3_k127_1062074_0 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001731 303.0
BYD3_k127_1062074_1 Histidine kinase K02484,K07644,K07645 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000001448 265.0
BYD3_k127_10696_0 Capsule assembly protein Wzi - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001391 432.0
BYD3_k127_10696_1 glycosyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007279 287.0
BYD3_k127_10696_2 - - - - 0.00000000005386 65.0
BYD3_k127_1073199_0 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000003139 224.0
BYD3_k127_1073199_1 regulator - - - 0.0000000000000000000000000000000000000000000000000002117 199.0
BYD3_k127_1073199_2 - - - - 0.0000000000005359 77.0
BYD3_k127_1095310_0 Involved in the biosynthesis of porphyrin-containing compound - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004942 432.0
BYD3_k127_1095310_1 Peptidase family M48 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007593 304.0
BYD3_k127_1095310_2 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 - 3.6.1.66 0.000000000000000000000000000000000000000000000000000000000000000000008571 239.0
BYD3_k127_1095310_3 50S ribosomal protein L31 K02909 - - 0.00000000000000000000000000001505 120.0
BYD3_k127_1095310_4 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 GO:0006139,GO:0006401,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0016070,GO:0016072,GO:0016075,GO:0019439,GO:0034641,GO:0034655,GO:0034660,GO:0034661,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:1901360,GO:1901361,GO:1901575 2.7.7.56 0.000000000000000005509 84.0
BYD3_k127_10986_0 Prolyl oligopeptidase family - - - 9.901e-301 936.0
BYD3_k127_10986_1 beta-lactamase K01069 - 3.1.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000136 402.0
BYD3_k127_10986_2 2OG-Fe(II) oxygenase superfamily - - - 0.000000000000000000000000000000000000000000000000000000001032 208.0
BYD3_k127_10986_3 Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily K00001,K00344 - 1.1.1.1,1.6.5.5 0.000000000000000000000000000000000000000000000000000000004289 203.0
BYD3_k127_10986_4 - - - - 0.000000000000000000000000000000000000000001248 166.0
BYD3_k127_10986_5 Transglycosylase associated protein - - - 0.00000000000000000000000000000000003706 137.0
BYD3_k127_1121257_0 TonB dependent receptor K02014 - - 4.168e-236 748.0
BYD3_k127_1121257_1 LysR substrate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002487 377.0
BYD3_k127_1127711_0 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006663 407.0
BYD3_k127_1127711_1 Binding-protein-dependent transport system inner membrane component K02038 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000731 423.0
BYD3_k127_1127711_2 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.00000000000000000000000000000000000000000000000000000000000000000002084 237.0
BYD3_k127_114065_0 PQQ-like domain K05889 - 1.1.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001704 573.0
BYD3_k127_114065_1 PQQ-like domain K00117,K05358 - 1.1.5.2,1.1.5.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000273 565.0
BYD3_k127_1155420_0 ABC transporter, phosphonate, periplasmic substrate-binding protein K02051 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005663 469.0
BYD3_k127_1155420_1 ATPases associated with a variety of cellular activities - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002128 381.0
BYD3_k127_1155420_2 Binding-protein-dependent transport system inner membrane component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001056 300.0
BYD3_k127_1156277_0 Predicted membrane protein (DUF2207) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009946 480.0
BYD3_k127_1156277_1 LemA family K03744 - - 0.000000000000000000000000000000000000000000000000000000000000000002096 234.0
BYD3_k127_1156277_2 Helix-turn-helix XRE-family like proteins - - - 0.0000000000000004085 81.0
BYD3_k127_1159114_0 Extracellular solute-binding protein, family 5 middle family protein K02035 - - 2.881e-205 651.0
BYD3_k127_1159114_1 ABC-type dipeptide oligopeptide nickel transport K02033 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000167 467.0
BYD3_k127_1159114_2 Specifically methylates the ribose of guanosine 2251 in 23S rRNA K03218 - 2.1.1.185 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006065 281.0
BYD3_k127_1159114_3 Peptidase dimerisation domain - - - 0.00000005735 55.0
BYD3_k127_117662_0 Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs) K03670 - - 3.024e-206 652.0
BYD3_k127_117662_1 Serine aminopeptidase, S33 - - - 0.0000000000000000003534 87.0
BYD3_k127_1178722_0 RND efflux system, outer membrane K18139 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001275 277.0
BYD3_k127_1178722_1 TIGRFAM transporter, hydrophobe amphiphile efflux-1 (HAE1) family K03296,K18138 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001168 261.0
BYD3_k127_118986_0 Aldehyde dehydrogenase family - - - 1.271e-216 682.0
BYD3_k127_118986_1 Beta-galactosidase K12308 - 3.2.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001402 582.0
BYD3_k127_118986_2 PFAM short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002178 318.0
BYD3_k127_118986_3 KR domain K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000478 266.0
BYD3_k127_118986_4 KR domain - - - 0.000000000000000000000000000000000000000000000000000000009777 208.0
BYD3_k127_118986_5 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00627 - 2.3.1.12 0.00000000000000000000000000003808 129.0
BYD3_k127_1197981_0 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.00000000000000000000000000000000000000000000000000000000000000000000000002072 254.0
BYD3_k127_1197981_1 COG4767 Glycopeptide antibiotics resistance protein - - - 0.00000000000000000000000000000002215 141.0
BYD3_k127_1197981_2 membrane K08985 - - 0.00000000000000003463 89.0
BYD3_k127_1202504_0 Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003322 306.0
BYD3_k127_1202504_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.00000000000000000000000000000000000000000000000000000008451 203.0
BYD3_k127_1202504_2 Tetratricopeptide repeat - - - 0.000000002371 66.0
BYD3_k127_1228749_0 Electron transfer flavoprotein-ubiquinone oxidoreductase K00311 - 1.5.5.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005864 558.0
BYD3_k127_1228749_1 COG0365 Acyl-coenzyme A synthetases AMP-(fatty) acid ligases K01907 - 6.2.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003314 482.0
BYD3_k127_1232472_0 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000023 333.0
BYD3_k127_1232472_1 helix_turn_helix, mercury resistance - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004955 248.0
BYD3_k127_1239565_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.0 1054.0
BYD3_k127_1239565_1 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K14393 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001534 417.0
BYD3_k127_1239565_2 membrane - - - 0.0000000000000000000000000000000000000001185 152.0
BYD3_k127_1239565_3 Catalyzes the reversible hydration of fumarate to (S)- malate K01676 - 4.2.1.2 0.00000000000000000000000000000000000000802 148.0
BYD3_k127_1239565_4 Uncharacterized protein family, UPF0114 - - - 0.00000000000000000000000000000000001172 141.0
BYD3_k127_1239565_5 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000002812 142.0
BYD3_k127_1239565_6 Uncharacterized protein family, UPF0114 - - - 0.0000000000004346 80.0
BYD3_k127_1239565_7 - - - - 0.0000002899 57.0
BYD3_k127_126396_0 Response regulator receiver - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001405 271.0
BYD3_k127_1265512_0 Aldehyde dehydrogenase family K00130,K00137 - 1.2.1.19,1.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005804 527.0
BYD3_k127_1265512_1 Binding-protein-dependent transport system inner membrane component K02053 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002762 342.0
BYD3_k127_1265512_2 Spermidine putrescine ABC transporter permease K02054 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000566 167.0
BYD3_k127_127059_0 lysine biosynthetic process via aminoadipic acid - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008089 501.0
BYD3_k127_127805_0 oxidase, subunit II K00426 - 1.10.3.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002081 525.0
BYD3_k127_127805_1 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000002572 88.0
BYD3_k127_12825_0 CheY-like receiver AAA-type ATPase and DNA-binding domains - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001454 438.0
BYD3_k127_12825_1 FtsX-like permease family K02004 - - 0.0000000000000000000000000000000000000000000006574 171.0
BYD3_k127_1298931_0 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006205 364.0
BYD3_k127_1298931_1 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K04794 - 3.1.1.29 0.00000000000000004241 83.0
BYD3_k127_1300503_0 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K07711 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002388 359.0
BYD3_k127_1301120_0 Formate hydrogenlyase subunit 3 Multisubunit Na H antiporter, MnhD subunit K12141 - - 2.71e-238 747.0
BYD3_k127_1301120_1 Respiratory-chain NADH dehydrogenase, 49 Kd subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008035 571.0
BYD3_k127_1301120_2 NADH ubiquinone oxidoreductase, 20 Kd subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002308 263.0
BYD3_k127_1301120_3 Spermidine synthase K00797 - 2.5.1.16 0.000000000000000000000000000000000000000000000000000000154 205.0
BYD3_k127_1301120_4 hydrogenase 4 membrane K12140 - - 0.000000000000000002144 85.0
BYD3_k127_1301120_5 membrane protein, terc K05794 - - 0.0000000000002089 71.0
BYD3_k127_1307659_0 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 - - 3.418e-194 616.0
BYD3_k127_1307659_1 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001553 374.0
BYD3_k127_1307659_2 Belongs to the CinA family K03743 GO:0003674,GO:0003824,GO:0016787,GO:0016810,GO:0016811,GO:0019159 3.5.1.42 0.0000000000000000000000000000000000000000000001482 173.0
BYD3_k127_1307659_3 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.00000000000000000000000000001774 126.0
BYD3_k127_1307769_0 Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme K02302,K02303,K02304 - 1.3.1.76,2.1.1.107,4.99.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006705 471.0
BYD3_k127_1307769_1 transcriptional regulator K13634 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0009314,GO:0009628,GO:0010165,GO:0010212,GO:0042802,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0097159,GO:1901363 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009456 347.0
BYD3_k127_1307769_2 Reduction of activated sulfate into sulfite K00390 - 1.8.4.10,1.8.4.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000287 275.0
BYD3_k127_1310322_0 Methyltransferase K10778 - 2.1.1.63 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002777 437.0
BYD3_k127_1310322_1 Membrane transport protein K07088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002247 358.0
BYD3_k127_1310322_2 Oxygenase, catalysing oxidative methylation of damaged DNA K09990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001958 282.0
BYD3_k127_1310322_3 Cupin domain - - - 0.00000000000000000000000000001374 120.0
BYD3_k127_1311214_0 ABC transporter K02065 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001052 274.0
BYD3_k127_1311214_1 ABC-type transport system involved in resistance to organic solvents, periplasmic component K02067 - - 0.00000000000000000000000000000000000000006881 164.0
BYD3_k127_1311214_2 ABC transporter permease K02066 - - 0.0000000000000000000000000000000000000001653 153.0
BYD3_k127_1314922_0 helix_turn_helix, cAMP Regulatory protein K21564 - - 0.000000000000000000000000000000003274 137.0
BYD3_k127_1314922_1 Protein kinase domain - - - 0.000000000007236 75.0
BYD3_k127_1317901_0 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455,K11745,K11747 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002753 614.0
BYD3_k127_1317901_1 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins - - - 0.000000000000000000000000000000000000003238 156.0
BYD3_k127_1323369_0 Putative neutral zinc metallopeptidase K07054 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001368 378.0
BYD3_k127_1323369_1 Phage tail sheath C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002979 252.0
BYD3_k127_1323369_2 PFAM Glycosyl transferase, group 1 - - - 0.00000000000000000000001596 102.0
BYD3_k127_1324283_0 alcohol dehydrogenase K00001,K00055 - 1.1.1.1,1.1.1.90 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102 496.0
BYD3_k127_1324283_1 Acyl CoA acetate 3-ketoacid CoA transferase, beta subunit K01029 - 2.8.3.5 0.00000000000000000000000000000000000000000000000008092 178.0
BYD3_k127_1324283_2 peptidyl-tyrosine sulfation - - - 0.0000009381 53.0
BYD3_k127_1326083_0 glucose sorbosone - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008232 593.0
BYD3_k127_1326083_1 Peptidase M16 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001128 517.0
BYD3_k127_1326083_2 Insulinase (Peptidase family M16) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003651 452.0
BYD3_k127_1326083_3 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.000000000000000000000000000000000000000005907 164.0
BYD3_k127_1326083_4 Glycerophosphoryl diester phosphodiesterase family K01126 - 3.1.4.46 0.000000000000000000000000000000000000008813 155.0
BYD3_k127_1326083_5 alpha/beta hydrolase fold K07019 - - 0.0000000000000000000000000000002693 126.0
BYD3_k127_1326083_6 Integral membrane protein CcmA involved in cell shape determination - - - 0.0000000000000005106 86.0
BYD3_k127_1327468_0 COG1228 Imidazolonepropionase and related amidohydrolases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000294 513.0
BYD3_k127_1327468_1 PFAM O-methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000366 280.0
BYD3_k127_1329612_0 OmpA family - - - 0.00000000000000000000000000000000000000000000000000000004169 216.0
BYD3_k127_1329612_1 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate K00147 GO:0003674,GO:0003824,GO:0004350,GO:0008150,GO:0008152,GO:0016491,GO:0016620,GO:0016903,GO:0055114 1.2.1.41 0.000000000000000000000000000000009237 127.0
BYD3_k127_1329612_2 MoaE protein K03635 - 2.8.1.12 0.0000000000000001743 79.0
BYD3_k127_1330448_0 multicopper - - - 1.154e-240 754.0
BYD3_k127_1330448_1 K COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000171 513.0
BYD3_k127_1330448_2 AAA ATPase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002162 376.0
BYD3_k127_1330448_3 Copper resistance K07233 - - 0.00000000000000000000000000000000000000000000000000000000000000000337 247.0
BYD3_k127_1330448_4 AsnC family K03719 - - 0.000000000000000000000000000000000000000000000000000000003132 203.0
BYD3_k127_1330448_5 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000007667 204.0
BYD3_k127_1330448_6 Glyoxalase-like domain K08234 - - 0.0000000000000000000000000000000000000000000000000000003881 196.0
BYD3_k127_1330448_7 heme binding - - - 0.00000009579 65.0
BYD3_k127_1332369_0 Glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006667 359.0
BYD3_k127_1332369_1 Belongs to the dihydroorotate dehydrogenase family K17828 - 1.3.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000679 269.0
BYD3_k127_1332369_2 Peptidase M23 - - - 0.000000000000000000000000000000000000000000000000000000000000000002843 240.0
BYD3_k127_1332369_3 Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide K03216 - 2.1.1.207 0.000000000000000000000000000000000000000000000000000000000000001364 221.0
BYD3_k127_1332369_4 One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA K03071 - - 0.00000000000000000000000000000000000001454 150.0
BYD3_k127_1332369_5 Rhodanese-related sulfurtransferase K01011 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 2.8.1.1,2.8.1.2 0.000000000000000000000000004632 121.0
BYD3_k127_1332369_6 Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins K03676 - - 0.00000000000000000000002146 106.0
BYD3_k127_1334627_0 DNA mediated transformation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007988 369.0
BYD3_k127_1334627_1 self proteolysis K03466,K06196,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002353 353.0
BYD3_k127_1334627_2 Animal haem peroxidase - - - 0.00000000000000000000000000000000000000000000000000005734 196.0
BYD3_k127_1354056_0 protein conserved in bacteria K09989 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003984 515.0
BYD3_k127_1354056_1 Penicillin acylase K01434 - 3.5.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000447 474.0
BYD3_k127_1354056_2 ATPase associated with various cellular activities, AAA_5 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005544 454.0
BYD3_k127_1357573_0 Dehydrogenase K00101 - 1.1.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003613 493.0
BYD3_k127_1357573_1 Ion channel - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005712 338.0
BYD3_k127_1357573_2 3-demethylubiquinone-9 3-methyltransferase K00568 - 2.1.1.222,2.1.1.64 0.000000000000000000000000000000000000000000000000000000000000000000000000000008946 278.0
BYD3_k127_1357573_3 methyltransferase K15942 - 2.1.1.288 0.0000000000000000000000000000000000000000000000000000006021 197.0
BYD3_k127_1357573_4 PFAM helix-turn-helix- domain containing protein AraC type - - - 0.0000000000000000000000000000000000000005317 149.0
BYD3_k127_1358857_0 TonB dependent receptor K02014 - - 7.829e-307 968.0
BYD3_k127_1358857_1 transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001036 319.0
BYD3_k127_1363853_0 ATPase FliI YscN family K02412 - 3.6.3.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002558 590.0
BYD3_k127_1363853_1 FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation K02410 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001313 357.0
BYD3_k127_1363853_2 Flagellar biosynthesis type III secretory pathway protein K02411 - - 0.00000000000000000000000000000000000000005152 158.0
BYD3_k127_1364502_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005263 608.0
BYD3_k127_1364502_1 Peptidoglycan-binding protein, CsiV - - - 0.00000000000003227 80.0
BYD3_k127_1364502_2 Response regulator containing a CheY-like receiver domain and a GGDEF domain - - - 0.000005312 50.0
BYD3_k127_1364661_0 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006597 381.0
BYD3_k127_1364661_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000003825 221.0
BYD3_k127_1364661_2 Prokaryotic N-terminal methylation motif K02655 - - 0.000000000000000000000000000000000001905 145.0
BYD3_k127_1364661_3 Ankyrin repeats (many copies) - - - 0.000003005 54.0
BYD3_k127_137235_0 chlorophyll binding - - - 0.00000000000000000000000000000000000000000000000000000000000000002488 238.0
BYD3_k127_137235_1 Peptidase C39 family - - - 0.000000000000000000000000000000000002939 152.0
BYD3_k127_1376158_0 SMP-30/Gluconolaconase/LRE-like region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008701 412.0
BYD3_k127_1376158_1 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004972 389.0
BYD3_k127_1376158_2 Response regulator receiver domain - - - 0.0000000000000000000001497 106.0
BYD3_k127_1376158_3 cheY-homologous receiver domain - - - 0.00000000000000005571 89.0
BYD3_k127_1378719_0 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K13566 - 3.5.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002527 317.0
BYD3_k127_1378719_1 PFAM Cys Met metabolism PLP-dependent enzyme K01761 - 4.4.1.11 0.0000000000000000000000000000000000000000000001326 178.0
BYD3_k127_1378719_2 PFAM Aminotransferase class I and II K14287 - 2.6.1.88 0.0000000000000000000000000000000000000001812 153.0
BYD3_k127_1382127_0 Cyclic nucleotide-monophosphate binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000008694 243.0
BYD3_k127_1382127_1 CopC domain K07156 - - 0.0000000000000002558 83.0
BYD3_k127_1382127_2 His Kinase A (phosphoacceptor) domain - - - 0.00000000001291 74.0
BYD3_k127_1382127_3 Copper chaperone PCu(A)C K09796 - - 0.00003261 50.0
BYD3_k127_1383034_0 glutamate dehydrogenase K15371 - 1.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004738 604.0
BYD3_k127_1406168_0 the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA K03664 - - 0.0000000000000000000000000000000000000000000000000000000000000000006779 235.0
BYD3_k127_1406168_1 Polyketide cyclase / dehydrase and lipid transport - - - 0.00000000000000000000000000000000001862 140.0
BYD3_k127_1406168_2 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K06186 - - 0.0000000000000000000378 94.0
BYD3_k127_1406168_3 Belongs to the UPF0125 (RnfH) family K09801 - - 0.0000000000000006129 80.0
BYD3_k127_1406168_4 Belongs to the Fur family K03711 - - 0.0005555 44.0
BYD3_k127_1417750_0 Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate K01952 - 6.3.5.3 0.0 1040.0
BYD3_k127_1417750_1 Domain of unknown function (DUF1820) - - - 0.000000000000000000000000000000000000931 140.0
BYD3_k127_1423100_0 AMP-binding enzyme C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007343 347.0
BYD3_k127_1423100_1 PEP-CTERM motif - - - 0.000000000000000000000000000009714 128.0
BYD3_k127_1423100_2 Phosphopantetheine attachment site - - - 0.00000000000000000001958 94.0
BYD3_k127_1423100_3 - - - - 0.0000000000000000002215 97.0
BYD3_k127_1423100_4 Sigma-54 interaction domain K07715 - - 0.00000000005041 63.0
BYD3_k127_1423100_5 PEP-CTERM motif - - - 0.0000001112 61.0
BYD3_k127_1426464_0 Aminotransferase class-V - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000173 415.0
BYD3_k127_1426464_1 COG1629 Outer membrane receptor proteins, mostly Fe transport - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000035 353.0
BYD3_k127_1426464_2 transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000271 191.0
BYD3_k127_1442759_0 Domain of unknown function (DUF3372) K01200 - 3.2.1.41 5.753e-229 722.0
BYD3_k127_1442759_1 L,D-transpeptidase catalytic domain K21470 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001231 282.0
BYD3_k127_1444857_0 Radical SAM K04034 - 1.21.98.3 9.225e-251 785.0
BYD3_k127_1444857_1 Fatty acid desaturase K00507 - 1.14.19.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001432 434.0
BYD3_k127_1444857_2 Predicted membrane protein (DUF2306) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002601 366.0
BYD3_k127_1444857_3 O-methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008671 299.0
BYD3_k127_1446116_0 TIGRFAM penicillin-binding protein, 1A K05366 - 2.4.1.129,3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000001689 262.0
BYD3_k127_1446116_1 mRNA catabolic process - - - 0.0000000000000000000000000000000000000000000000004507 188.0
BYD3_k127_1446116_2 Belongs to the citrate synthase family K01647 - 2.3.3.1 0.0000000000000000003554 87.0
BYD3_k127_1446502_0 Belongs to the beta-ketoacyl-ACP synthases family K00647,K09458 - 2.3.1.179,2.3.1.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001032 532.0
BYD3_k127_1446502_1 Beta-ketoacyl synthase, N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000006255 231.0
BYD3_k127_1446502_2 pteridine-dependent deoxygenase K18240 - 4.1.3.40,4.1.3.45 0.0000000000000000000000000000002867 131.0
BYD3_k127_1446502_3 acyl carrier protein K02078 - - 0.000000000000000000000000000000709 133.0
BYD3_k127_1446502_4 - - - - 0.000000000000000000000000007887 120.0
BYD3_k127_1448570_0 Circularly permuted ATP-grasp type 2 - - - 3.126e-254 792.0
BYD3_k127_1448570_1 A predicted alpha-helical domain with a conserved ER motif. - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000114 400.0
BYD3_k127_1448570_2 PFAM 20S proteasome, A and B subunits K07395 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001426 342.0
BYD3_k127_1448570_3 Transglutaminase/protease-like homologues - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001566 252.0
BYD3_k127_1448570_4 Protein of unknown function (DUF3667) - - - 0.000000000000000000000000000000000000000001167 166.0
BYD3_k127_1450396_0 Elongator protein 3, MiaB family, Radical SAM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002146 360.0
BYD3_k127_1450396_1 response regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000136 267.0
BYD3_k127_1450396_2 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001478 283.0
BYD3_k127_1450396_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000351 228.0
BYD3_k127_1450396_4 Sigma-70 region 2 K03088 - - 0.0000000000000000000000000000000000000000000000001959 185.0
BYD3_k127_1450396_5 - - - - 0.0000000000000000000000000000000000000000004489 169.0
BYD3_k127_1450396_6 - - - - 0.00000000001259 77.0
BYD3_k127_1454012_0 6-phosphogluconolactonase activity - - - 0.0 1364.0
BYD3_k127_1454012_1 Sigma-70 region 2 K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007638 441.0
BYD3_k127_1454012_2 - - - - 0.00000000000000000000000000000000000001352 151.0
BYD3_k127_1454012_3 Chitin-binding domain type 3 - - - 0.00000000000000000000000000000000009568 133.0
BYD3_k127_1454012_4 YCII-related domain - - - 0.0000000000000000000000000000000007351 135.0
BYD3_k127_1469526_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 GO:0003674,GO:0003824,GO:0003954,GO:0008137,GO:0008150,GO:0008152,GO:0016491,GO:0016651,GO:0016655,GO:0050136,GO:0055114 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000001624 258.0
BYD3_k127_1469526_1 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter - - - 0.000002829 53.0
BYD3_k127_1473378_0 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 7.676e-217 681.0
BYD3_k127_1473378_1 Capsule biosynthesis GfcC - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002461 604.0
BYD3_k127_1473378_10 rhamnosyltransferase K12990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000151 299.0
BYD3_k127_1473378_11 Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose K01790 - 5.1.3.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000005915 261.0
BYD3_k127_1473378_12 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001686 274.0
BYD3_k127_1473378_13 transferase activity, transferring glycosyl groups - - - 0.000000000000000000000000000000000000000000000000000000000000008375 228.0
BYD3_k127_1473378_14 glycosyl transferase family 8 - - - 0.0000000000000000000000000000000000000000000000000000000000001788 231.0
BYD3_k127_1473378_15 Catalyzes the transfer of the GlcNAc-1-phosphate moiety from UDP-GlcNAc onto the carrier lipid undecaprenyl phosphate (C55-P), yielding GlcNAc-pyrophosphoryl-undecaprenyl (GlcNAc-PP- C55) K02851 - 2.7.8.33,2.7.8.35 0.0000000000000000000000000000000000000000000000000000000004349 216.0
BYD3_k127_1473378_16 3-beta hydroxysteroid dehydrogenase/isomerase family K01784 - 5.1.3.2 0.000000000000000000000000000000000000000000001363 186.0
BYD3_k127_1473378_17 Polysaccharide biosynthesis protein - - - 0.00000000000000000000000000000000000000000000181 170.0
BYD3_k127_1473378_18 Glycosyl transferase family 2 K07011 - - 0.0000000000000000000000000000000000000000005052 169.0
BYD3_k127_1473378_19 Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000004509 158.0
BYD3_k127_1473378_2 Polysaccharide biosynthesis protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004536 578.0
BYD3_k127_1473378_20 PFAM lipopolysaccharide biosynthesis protein - - - 0.00000000000000000000000000000000000223 150.0
BYD3_k127_1473378_21 Cupin 2, conserved barrel domain protein K16011 - 2.7.7.13,5.3.1.8 0.00000000000000006007 81.0
BYD3_k127_1473378_22 peptidoglycan biosynthetic process K03980,K21004 - - 0.00005055 55.0
BYD3_k127_1473378_3 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710 - 4.2.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004795 508.0
BYD3_k127_1473378_4 Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis K00973 - 2.7.7.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001086 426.0
BYD3_k127_1473378_5 Capsule assembly protein Wzi - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004197 425.0
BYD3_k127_1473378_6 transferase activity, transferring glycosyl groups K20444 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003644 344.0
BYD3_k127_1473378_7 Polysaccharide biosynthesis protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007257 327.0
BYD3_k127_1473378_8 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 - 1.1.1.133 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003469 331.0
BYD3_k127_1473378_9 Methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004921 305.0
BYD3_k127_1495141_0 Necessary for normal cell division and for the maintenance of normal septation K03978 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000007551 216.0
BYD3_k127_1495141_1 PFAM cytochrome c - - - 0.000000000000000000000000000000000000000000000000000000001595 208.0
BYD3_k127_1495141_2 Mediates influx of magnesium ions K03284 - - 0.000000000000000000000000000000000000000000000000000000003671 208.0
BYD3_k127_1495141_3 Thiol disulfide interchange protein K03673 - - 0.00000000000000000000000000000000000000000183 167.0
BYD3_k127_1506868_0 TonB dependent receptor - - - 6.236e-268 852.0
BYD3_k127_1506868_1 Glycogen debranching enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001437 501.0
BYD3_k127_1506868_2 dioxygenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004959 327.0
BYD3_k127_1506868_3 Tannase and feruloyl esterase - - - 0.00000000000000000000000000000000001974 140.0
BYD3_k127_1506868_4 Bacterial regulatory proteins, lacI family - - - 0.00000000000004535 74.0
BYD3_k127_1515362_0 Amino acid permease K03294 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001096 293.0
BYD3_k127_1515362_1 helix_turn_helix, mercury resistance - - - 0.0000000000001259 77.0
BYD3_k127_1515362_2 MarC family integral membrane protein K05595 - - 0.000000007071 57.0
BYD3_k127_1527875_0 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 - 1.17.7.1,1.17.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002441 609.0
BYD3_k127_1527875_1 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009779 484.0
BYD3_k127_1527875_2 Sugar-transfer associated ATP-grasp - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002205 297.0
BYD3_k127_1527875_3 pterin-4-alpha-carbinolamine dehydratase K01724 - 4.2.1.96 0.000000000000000000000000000000000006731 154.0
BYD3_k127_1527875_4 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.0000000000000000000000000000000004585 133.0
BYD3_k127_1527875_5 OmpA-like transmembrane domain - - - 0.000000000149 71.0
BYD3_k127_153726_0 KR domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009359 366.0
BYD3_k127_153726_1 C-terminal beta-propeller domain distantly related to WD-40 repeats - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001361 352.0
BYD3_k127_1567275_0 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001838 295.0
BYD3_k127_1567275_1 ABC transporter K02013,K05776 - 3.6.3.34 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002917 290.0
BYD3_k127_1567275_2 Signal transduction protein - - - 0.000000000000000000000000000000000000000000004298 177.0
BYD3_k127_1583529_0 COG1629 Outer membrane receptor proteins, mostly Fe transport - - - 4.371e-300 952.0
BYD3_k127_1583529_1 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002792 618.0
BYD3_k127_1583529_2 Methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005546 342.0
BYD3_k127_1583529_3 PAP2 superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001616 339.0
BYD3_k127_1583529_4 COG2931 RTX toxins and related Ca2 -binding proteins - - - 0.000000000000000000000000000000000000000000000000000000008921 209.0
BYD3_k127_1583529_5 NADH-flavin reductase K07118 - - 0.000000000000000000000000000000000000000000000000000000168 204.0
BYD3_k127_1583529_6 Cupin 2, conserved barrel domain protein K19547 GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016853,GO:0016860,GO:0016863,GO:0016999,GO:0017000,GO:0017144,GO:0043167,GO:0043169,GO:0044237,GO:0044249,GO:0046872,GO:0046914,GO:0050897 5.3.3.19 0.00000000000000000000000000000000000000000000000001356 183.0
BYD3_k127_1583529_7 Protein tyrosine kinase K08884 - 2.7.11.1 0.00000000007352 75.0
BYD3_k127_1588450_0 response regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000006401 243.0
BYD3_k127_1588450_1 Response regulator receiver - - - 0.0000000000000008479 84.0
BYD3_k127_1588450_2 response regulator - - - 0.000000000000001736 82.0
BYD3_k127_1588450_3 Domain of unknown function (DUF4142) K08995 - - 0.00000000000006218 80.0
BYD3_k127_1588450_4 Protein required for attachment to host cells - - - 0.00000000001472 70.0
BYD3_k127_1604015_0 Bacterial protein of unknown function (DUF885) - - - 1.81e-220 696.0
BYD3_k127_1604015_1 Membrane dipeptidase (Peptidase family M19) K01273 - 3.4.13.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004717 342.0
BYD3_k127_1604015_2 helix_turn_helix ASNC type K03719 - - 0.00000000000000000000000000000008739 127.0
BYD3_k127_1604015_3 Amidohydrolase family K06015 - 3.5.1.81 0.000000000000000000000000005345 111.0
BYD3_k127_1611026_0 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003705 289.0
BYD3_k127_1611026_1 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0032296,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363 3.1.26.3 0.0000000000000000000000000000000000000000000000000000000000000006196 224.0
BYD3_k127_1611026_2 Domain of unknown function (DUF4845) - - - 0.00000000000000009918 85.0
BYD3_k127_1611026_3 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 0.00000001175 55.0
BYD3_k127_1628456_0 Acts as a magnesium transporter K06213 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005023 504.0
BYD3_k127_1628456_1 Patatin-like phospholipase K07001 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002609 340.0
BYD3_k127_1628456_2 Displays ATPase and GTPase activities K06958 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008344 331.0
BYD3_k127_1628456_3 Redoxin K03564 - 1.11.1.15 0.0000000000000000000000000000000000000000519 157.0
BYD3_k127_1628617_0 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003205 263.0
BYD3_k127_1628617_1 Aminotransferase class-V - - - 0.000000000000000000000000000000000000006986 149.0
BYD3_k127_1628617_2 Prokaryotic dksA/traR C4-type zinc finger - - - 0.0000000000000000000000000002056 120.0
BYD3_k127_1628617_3 Belongs to the thiolase family K00632 - 2.3.1.16 0.000000000001102 68.0
BYD3_k127_1629395_0 cytochrome P450 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001016 381.0
BYD3_k127_1629395_1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009184 319.0
BYD3_k127_1629395_2 Transcriptional regulator, TetR, C-terminal - - - 0.000000000000000000000000000000000000000000000000000000001046 209.0
BYD3_k127_1630401_0 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004563 487.0
BYD3_k127_1630401_1 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004525 360.0
BYD3_k127_1631751_0 GMC oxidoreductase - - - 8.933e-288 891.0
BYD3_k127_1631751_1 Gluconate 2-dehydrogenase subunit 3 - - - 0.000000000000000000000000000000000000000000000000002413 206.0
BYD3_k127_1631751_2 NADH:flavin oxidoreductase / NADH oxidase family K00317 - 1.5.8.1,1.5.8.2 0.000000000000000000000000000000000000000000000000115 182.0
BYD3_k127_1631751_3 membrane K14205 - 2.3.2.3 0.0000000000000000000000000000000000000001136 164.0
BYD3_k127_1631751_4 DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair K10747 - 6.5.1.1,6.5.1.6,6.5.1.7 0.000000000597 64.0
BYD3_k127_1639063_0 Asparagine synthase K01953 - 6.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000001649 274.0
BYD3_k127_1639063_1 Asparagine synthase K01953 - 6.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000003444 252.0
BYD3_k127_1639063_2 Transglutaminase-like superfamily - - - 0.00000000000000000000000000000001826 136.0
BYD3_k127_1639063_3 Transglutaminase-like superfamily - - - 0.00000000000000001312 93.0
BYD3_k127_1639473_0 PD-(D/E)XK nuclease superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001811 279.0
BYD3_k127_1639473_1 exonuclease activity K16899 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000003817 270.0
BYD3_k127_1640116_0 Amidase K01426 - 3.5.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003791 567.0
BYD3_k127_1640116_1 AhpC/TSA family - - - 0.0000000000000000000000000000000000000000000000000000000003906 209.0
BYD3_k127_1640941_0 Dehydrogenase K17760 - 1.1.9.1 3.31e-221 700.0
BYD3_k127_1640941_1 OmpA-like transmembrane domain - - - 0.0000000000000000004138 96.0
BYD3_k127_1640941_2 TonB-dependent Receptor Plug - - - 0.0000000008591 62.0
BYD3_k127_1642085_0 Methyltransferase K00564 - 2.1.1.172 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002475 456.0
BYD3_k127_1642085_1 Belongs to the pseudouridine synthase RsuA family K06183 - 5.4.99.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002776 350.0
BYD3_k127_1642085_2 endonuclease containing a URI domain K07461 - - 0.000000000000000000001888 97.0
BYD3_k127_1642085_3 Psort location Cytoplasmic, score 8.96 - - - 0.000000000000001637 85.0
BYD3_k127_1651510_0 Domain of Unknown Function (DUF748) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001909 491.0
BYD3_k127_1651510_1 COG1902 NADH flavin oxidoreductases, Old Yellow Enzyme family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001056 396.0
BYD3_k127_1651510_2 PkhD-type hydroxylase K07336 GO:0006873,GO:0006875,GO:0006879,GO:0006950,GO:0006974,GO:0008150,GO:0009987,GO:0019725,GO:0030003,GO:0033554,GO:0042592,GO:0046916,GO:0048878,GO:0050801,GO:0050896,GO:0051716,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0065007,GO:0065008,GO:0098771 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001219 323.0
BYD3_k127_1651510_3 PepSY-associated TM region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002463 317.0
BYD3_k127_1651510_4 TonB dependent receptor K16090 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002526 276.0
BYD3_k127_1658577_0 protein containing a von Willebrand factor type A (vWA) domain - - - 9.874e-212 684.0
BYD3_k127_1658577_1 VWA domain containing CoxE-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001367 505.0
BYD3_k127_1658577_2 Zinc finger, swim domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000271 444.0
BYD3_k127_1658577_3 PFAM AAA domain (dynein-related subfamily) - - - 0.0000000000001013 71.0
BYD3_k127_1658577_4 Trypsin-like serine protease - - - 0.0000000000001018 83.0
BYD3_k127_1658577_5 - - - - 0.00000003873 55.0
BYD3_k127_1659223_0 PEP-utilising enzyme, TIM barrel domain K01007 - 2.7.9.2 0.0 1225.0
BYD3_k127_1659223_1 FtsX-like permease family K02004 - - 5.185e-262 831.0
BYD3_k127_1659223_2 RNA-metabolising metallo-beta-lactamase K07576 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000435 551.0
BYD3_k127_1659223_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002924 383.0
BYD3_k127_1659223_4 ATPases associated with a variety of cellular activities K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001468 340.0
BYD3_k127_1659223_5 Alcohol dehydrogenase GroES-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002709 334.0
BYD3_k127_1659223_6 Universal stress protein - - - 0.000000000000000000000000000000000001525 143.0
BYD3_k127_1659223_7 Prokaryotic cytochrome b561 K12262 - - 0.0000000000000000000000000000000009379 137.0
BYD3_k127_1659223_8 PFAM Cold-shock protein, DNA-binding - - - 0.0000000000000000000000004689 114.0
BYD3_k127_1678609_0 Phosphoribosylformylglycinamidine cyclo-ligase K01933 - 6.3.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009137 458.0
BYD3_k127_1678609_1 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.00000000000000000000000000000000000000000000002434 196.0
BYD3_k127_1678609_2 CDP-alcohol phosphatidyltransferase K08744 - 2.7.8.41 0.0000000000000000000000000000000000000007367 154.0
BYD3_k127_1678609_3 protein conserved in bacteria K09938 - - 0.0000000000000000000000000009733 124.0
BYD3_k127_1681028_0 synthase - - - 0.000000000000000000000000000000000000000000000000000003418 196.0
BYD3_k127_1681028_1 diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000008118 202.0
BYD3_k127_168848_0 Protein of unknown function (DUF861) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000108 437.0
BYD3_k127_168848_1 Enoyl-(Acyl carrier protein) reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000016 379.0
BYD3_k127_168848_2 3-demethylubiquinone-9 3-methyltransferase K00568 - 2.1.1.222,2.1.1.64 0.00000000000000000000000000000000000000000000000000000000000000000000000001241 252.0
BYD3_k127_168848_3 PFAM FAD linked oxidase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000007197 249.0
BYD3_k127_16895_0 High confidence in function and specificity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001789 524.0
BYD3_k127_16895_1 DoxX-like family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001432 304.0
BYD3_k127_16895_2 Virulence factor BrkB K07058 - - 0.00000000000000000000000000000000000000000000000000000000000658 219.0
BYD3_k127_16895_3 Hemerythrin - - - 0.0000000000000000000000000000000000004274 151.0
BYD3_k127_16895_4 Response regulator receiver domain - - - 0.00000000000000000000000000000001255 131.0
BYD3_k127_16895_5 Domain of Unknown Function (DUF748) - - - 0.000000000000004307 77.0
BYD3_k127_16895_6 Protein of unknown function (DUF2934) - - - 0.000005136 53.0
BYD3_k127_169658_0 low molecular weight K03741,K03892 - 1.20.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000005301 249.0
BYD3_k127_169658_1 Belongs to the MIP aquaporin (TC 1.A.8) family - - - 0.0000000000000000000000000000000000000000000000000000000000003762 222.0
BYD3_k127_169658_2 helix_turn_helix, Arsenical Resistance Operon Repressor K03892 - - 0.0000000000000000000000000000000003387 134.0
BYD3_k127_169658_3 Acetyltransferase (GNAT) family K00619 - 2.3.1.1 0.000000000000000000000000000003175 126.0
BYD3_k127_169658_4 - - - - 0.000000003085 63.0
BYD3_k127_1697832_0 Participates in both transcription termination and antitermination K02600 - - 2.618e-220 694.0
BYD3_k127_1697832_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000117 564.0
BYD3_k127_1697832_2 receptor K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000408 526.0
BYD3_k127_1697832_3 TIGRFAM proton-translocating NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003333 267.0
BYD3_k127_1697832_4 Required for maturation of 30S ribosomal subunits K09748 GO:0000028,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000001652 160.0
BYD3_k127_1697832_5 Involved in the aerobic and anaerobic degradation of long-chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate K01782,K01825 GO:0003674,GO:0003824,GO:0003857,GO:0004165,GO:0004300,GO:0006082,GO:0006629,GO:0006631,GO:0006635,GO:0008150,GO:0008152,GO:0008692,GO:0009056,GO:0009062,GO:0009987,GO:0016042,GO:0016054,GO:0016491,GO:0016614,GO:0016616,GO:0016829,GO:0016835,GO:0016836,GO:0016853,GO:0016854,GO:0016856,GO:0016860,GO:0016863,GO:0019395,GO:0019752,GO:0030258,GO:0032787,GO:0034440,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0046395,GO:0055114,GO:0071704,GO:0072329,GO:1901575 1.1.1.35,4.2.1.17,5.1.2.3,5.3.3.8 0.0000002742 54.0
BYD3_k127_1726313_0 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007876 334.0
BYD3_k127_1726313_1 Involved in DNA repair and RecF pathway recombination K03584 - - 0.00000000000000000000000000000000000000000000001545 181.0
BYD3_k127_1726313_2 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0032296,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363 3.1.26.3 0.0000000000004144 71.0
BYD3_k127_1730243_0 hydrolase activity, acting on ester bonds - - - 0.0000000000000000000000000000000000000000000000000000000000000000001051 239.0
BYD3_k127_1730243_1 - - - - 0.000000000000000000000001824 116.0
BYD3_k127_1730243_2 prohibitin homologues - - - 0.00000000000000005108 95.0
BYD3_k127_1730243_3 Tetratricopeptide repeat - - - 0.00000000000000007162 96.0
BYD3_k127_1730243_4 RHS Repeat - - - 0.0000001995 58.0
BYD3_k127_1749013_0 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 GO:0000166,GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0003909,GO:0003911,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016874,GO:0016886,GO:0033554,GO:0034641,GO:0034645,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050662,GO:0050896,GO:0051103,GO:0051287,GO:0051716,GO:0070403,GO:0071704,GO:0090304,GO:0097159,GO:0140097,GO:1901265,GO:1901360,GO:1901363,GO:1901576 6.5.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009202 447.0
BYD3_k127_1749013_1 Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins K03528 - - 0.00000000000000000000253 102.0
BYD3_k127_1750433_0 KR domain K00059,K18337 - 1.1.1.100,1.1.1.173,1.1.1.377,1.1.1.378 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009395 303.0
BYD3_k127_1750433_1 Alpha beta hydrolase - - - 0.00000000000000000000000000000000000000000006972 173.0
BYD3_k127_1750433_2 Bacterial protein of unknown function (DUF934) - - - 0.0000000000000002581 79.0
BYD3_k127_1755147_0 GMC oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000824 605.0
BYD3_k127_1755147_1 - - - - 0.0000000000002137 77.0
BYD3_k127_1755147_2 Sugar (and other) transporter - - - 0.00000000003529 66.0
BYD3_k127_1755147_3 Membrane dipeptidase (Peptidase family M19) - - - 0.000156 51.0
BYD3_k127_1768010_0 alpha/beta hydrolase fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003588 385.0
BYD3_k127_1768010_1 Helix-turn-helix XRE-family like proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005901 340.0
BYD3_k127_1768010_2 Beta-lactamase - - - 0.00000000008467 70.0
BYD3_k127_1781461_0 Domain of unknown function (DUF4142) K08995 - - 0.0000000000000002465 88.0
BYD3_k127_1791098_0 Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004299 379.0
BYD3_k127_1791098_1 SMP-30/Gluconolaconase/LRE-like region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002878 318.0
BYD3_k127_1791098_2 COG1629 Outer membrane receptor proteins, mostly Fe transport - - - 0.00000000000000000000000000000000000000000000000000000008706 208.0
BYD3_k127_1794965_0 COG1473 Metal-dependent amidase aminoacylase carboxypeptidase K01436 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000602 477.0
BYD3_k127_1794965_1 Histidine kinase K11527 - 2.7.13.3 0.00000000000000007325 92.0
BYD3_k127_1794965_2 Mycolic acid cyclopropane synthetase K00574 - 2.1.1.79 0.000000000173 66.0
BYD3_k127_1806733_0 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009263 524.0
BYD3_k127_1806733_1 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002219 470.0
BYD3_k127_1806733_2 Prephenate dehydratase K14170 - 4.2.1.51,5.4.99.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005936 449.0
BYD3_k127_1806733_3 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 - 2.7.4.25 0.000000000000000000000000006118 112.0
BYD3_k127_1806733_4 D-isomer specific 2-hydroxyacid dehydrogenase K00058 - 1.1.1.399,1.1.1.95 0.00000000000000000000005392 99.0
BYD3_k127_1827113_0 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases large terminal subunit K15751 - 1.14.12.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004305 433.0
BYD3_k127_1827113_1 Alpha beta hydrolase K10216,K10702,K15756,K18092 - 3.7.1.13,3.7.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000249 310.0
BYD3_k127_1827113_2 Catalytic LigB subunit of aromatic ring-opening dioxygenase K04101,K15755 - 1.13.11.8 0.00000000000000000000000000000000000000000001197 168.0
BYD3_k127_1827113_3 - K15754 - - 0.000000001377 66.0
BYD3_k127_1837212_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 5.329e-220 689.0
BYD3_k127_1837212_1 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006417,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0015935,GO:0016043,GO:0017148,GO:0019222,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032991,GO:0034248,GO:0034249,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065003,GO:0065007,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0080090,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904,GO:2000112,GO:2000113 - 0.0000000000000000000000000000000000000000005236 159.0
BYD3_k127_1846067_0 dihydrodipicolinate reductase K21672 - 1.4.1.12,1.4.1.26 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001029 323.0
BYD3_k127_1846067_1 TonB dependent receptor K02014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004221 283.0
BYD3_k127_1846067_2 Isoprenylcysteine carboxyl methyltransferase (ICMT) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001963 262.0
BYD3_k127_1846067_3 SnoaL-like domain - - - 0.00000000000000000000000101 106.0
BYD3_k127_1849854_0 lysine biosynthetic process via aminoadipic acid - - - 4.232e-290 910.0
BYD3_k127_1849854_1 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL K07303 - 1.3.99.16 0.00000000000000000000000000000000000000000000000000000004367 203.0
BYD3_k127_1849854_2 Helix-turn-helix XRE-family like proteins - - - 0.0000000000000000000000000000000000000000000000002553 188.0
BYD3_k127_1849854_3 Glyoxalase-like domain - - - 0.00000005162 62.0
BYD3_k127_185571_0 AraC family transcriptional regulator K18991 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001461 533.0
BYD3_k127_185571_1 Saccharopine dehydrogenase NADP binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000059 381.0
BYD3_k127_185571_10 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.000000000000000000001018 106.0
BYD3_k127_185571_2 ubiE/COQ5 methyltransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005508 316.0
BYD3_k127_185571_3 CAAX protease self-immunity K07052 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000224 249.0
BYD3_k127_185571_4 Phospholipid methyltransferase - - - 0.0000000000000000000000000000000000000000000000001055 182.0
BYD3_k127_185571_5 PFAM NIPSNAP family containing protein - - - 0.0000000000000000000000000000000000000000000000002195 183.0
BYD3_k127_185571_6 OsmC-like protein - - - 0.0000000000000000000000000000000000000000000002726 173.0
BYD3_k127_185571_7 Protein of unknown function, DUF393 - - - 0.000000000000000000000000000000000000000000003937 166.0
BYD3_k127_185571_8 Antibiotic biosynthesis monooxygenase - - - 0.0000000000000000000000000000000000000008353 150.0
BYD3_k127_185571_9 Domain of unknown function (DUF4166) - - - 0.0000000000000000000002375 105.0
BYD3_k127_1889300_0 Glycerophosphoryl diester phosphodiesterase family K01126 - 3.1.4.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002163 355.0
BYD3_k127_1889300_1 Alpha/beta hydrolase family - - - 0.00000000000000000000000000000000000000000000000000007651 197.0
BYD3_k127_1889300_2 Pkd domain containing protein - - - 0.0000000000000000000007378 111.0
BYD3_k127_1889300_3 Enoyl-(Acyl carrier protein) reductase K13775 - - 0.000000000000000000965 86.0
BYD3_k127_1890667_0 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005854 371.0
BYD3_k127_1890667_1 LysR substrate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000166 331.0
BYD3_k127_1890667_2 Transcriptional regulator MerR family - - - 0.0000000000005727 72.0
BYD3_k127_1890667_3 Ca2 -binding protein (EF-Hand superfamily - - - 0.000001796 54.0
BYD3_k127_1890667_4 Domain of unknown function (DUF4168) - - - 0.0002148 51.0
BYD3_k127_1891899_0 Protein tyrosine kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001192 571.0
BYD3_k127_1891899_1 Universal stress protein family - - - 0.000000000000000000000000000000000000000000000000000000000000000285 235.0
BYD3_k127_1891899_2 ECF sigma factor - - - 0.0000000000000000000000000000000000000000187 157.0
BYD3_k127_1891899_3 L,D-transpeptidase catalytic domain K21470 - - 0.00000000000000000000000002094 116.0
BYD3_k127_189778_0 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002029 329.0
BYD3_k127_189778_1 Periplasmic binding protein K02016 - - 0.00000000000000000000000000000000000000000000000000000000000000000001203 245.0
BYD3_k127_189778_2 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP K19221 - 2.5.1.17 0.0000000000000000000000000000001823 124.0
BYD3_k127_1903583_0 Barrel-sandwich domain of CusB or HlyD membrane-fusion K02005 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001182 376.0
BYD3_k127_1903583_1 Predicted integral membrane protein (DUF2189) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000129 255.0
BYD3_k127_1903583_2 PFAM ABC transporter related K02003 - - 0.00000000000000000000649 94.0
BYD3_k127_1903583_3 - - - - 0.000006755 55.0
BYD3_k127_190587_0 Peptidase family M1 domain - - - 7.918e-207 652.0
BYD3_k127_190587_1 Pirin C-terminal cupin domain K06911 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002138 333.0
BYD3_k127_1918863_0 Dehydrogenase K00101,K15054 - 1.1.2.3,1.1.99.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002017 566.0
BYD3_k127_1918863_1 Outer membrane lipoprotein - - - 0.00000000000000000000000000000000000000000000000000000003508 203.0
BYD3_k127_1918863_2 amine dehydrogenase activity - - - 0.0000000000000000000000000000000000000009022 170.0
BYD3_k127_1918863_3 - - - - 0.000000000000000000000000001516 121.0
BYD3_k127_1918863_4 Protein of unknown function (DUF1579) - - - 0.00000000000000175 84.0
BYD3_k127_1918863_5 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.00001029 52.0
BYD3_k127_1920033_0 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008669 350.0
BYD3_k127_1920033_1 oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006049 332.0
BYD3_k127_1920033_2 Belongs to the beta-ketoacyl-ACP synthases family K09458 - 2.3.1.179 0.000000005482 62.0
BYD3_k127_1927993_0 Major facilitator superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000179 546.0
BYD3_k127_1927993_1 PFAM NAD binding domain of 6-phosphogluconate dehydrogenase K00020,K00042 - 1.1.1.31,1.1.1.60 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003246 331.0
BYD3_k127_1927993_2 Alpha/beta hydrolase family - - - 0.000000000000000000000000003342 117.0
BYD3_k127_1952595_0 Acyl-CoA dehydrogenase, C-terminal domain K00249 - 1.3.8.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003899 392.0
BYD3_k127_1952595_1 peptidyl-prolyl cis-trans isomerase K01802 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006641 376.0
BYD3_k127_1955072_0 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000001158 239.0
BYD3_k127_1955072_1 PFAM Endoribonuclease L-PSP - - - 0.00000000000000000000000000000000000009596 145.0
BYD3_k127_1955743_0 trisaccharide binding - - - 5.201e-214 695.0
BYD3_k127_1955743_1 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 - 6.3.4.4 0.000000000000000000000000000000000000000000000000000000004536 200.0
BYD3_k127_1955743_2 Protein of unknown function (DUF1428) - - - 0.000000000000000000000000000000000000000000000000000001196 194.0
BYD3_k127_1961922_0 PFAM Magnesium chelatase, ChlI subunit K07391 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006912 562.0
BYD3_k127_1961922_1 Belongs to the P(II) protein family K04752 - - 0.00000000000000000000000000000000000000000004699 164.0
BYD3_k127_1961922_2 Cytochrome C oxidase, cbb3-type, subunit III K02277 - 1.9.3.1 0.0000000000000000000000002916 112.0
BYD3_k127_1961922_3 protein conserved in bacteria K09806 - - 0.000000000000000000003164 98.0
BYD3_k127_1961922_4 alginic acid biosynthetic process K10297 - - 0.00006547 45.0
BYD3_k127_1972193_0 Lactonase, 7-bladed beta-propeller - - - 0.00000000000000000000000000000000000000000000000000000009717 207.0
BYD3_k127_1972193_1 Belongs to the SOS response-associated peptidase family - - - 0.0000000000000000000000000000001662 133.0
BYD3_k127_1972193_2 von Willebrand factor (vWF) type A domain - - - 0.00000000000000000000001742 100.0
BYD3_k127_1975128_0 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL K07303 - 1.3.99.16 1.94e-207 658.0
BYD3_k127_1975128_1 COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases - - - 0.000000000000000000000000000000000000000000000000007108 187.0
BYD3_k127_1978669_0 peptidase M24B, X-Pro dipeptidase aminopeptidase K01262 - 3.4.11.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005097 599.0
BYD3_k127_1978669_1 Ubiquinone biosynthesis hydroxylase, UbiH UbiF VisC COQ6 K03185 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006745 368.0
BYD3_k127_1978669_2 TIGRFAM Ubiquinone biosynthesis hydroxylase, UbiH UbiF VisC COQ6 K18800 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005477 276.0
BYD3_k127_1978669_3 Belongs to the UPF0149 family K09895 - - 0.000000000000000000000000000005871 126.0
BYD3_k127_1980201_0 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000557 384.0
BYD3_k127_1980201_1 Diguanylate cyclase phosphodiesterase with PAS PAC - - - 0.00000000000000000000000000000000000000000000000000000000006475 213.0
BYD3_k127_1980201_2 MAPEG family - - - 0.000000000000000000000000000000000003207 141.0
BYD3_k127_1980201_3 diguanylate cyclase - - - 0.0000000000000000000000000006027 129.0
BYD3_k127_198038_0 Fis family transcriptional regulator K10941 - - 0.0000000000000000000000000000000000000000000000000005614 194.0
BYD3_k127_198038_1 flagellar protein FliS K02422 - - 0.000000000000000000000000000000009235 135.0
BYD3_k127_198038_2 Atypical PilZ domain, cyclic di-GMP receptor - - - 0.00000000000000000005069 97.0
BYD3_k127_198038_3 Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end K02407 - - 0.00000000000000004062 83.0
BYD3_k127_1981686_0 MatE - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003731 503.0
BYD3_k127_1981686_1 Peptidase dimerisation domain - - - 0.0000000000000003087 82.0
BYD3_k127_1981686_2 Thioesterase - - - 0.000000005438 59.0
BYD3_k127_1991277_0 Belongs to the FAD-dependent oxidoreductase 2 family. FRD SDH subfamily K00239 - 1.3.5.1,1.3.5.4 6.913e-312 962.0
BYD3_k127_1991277_1 Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family K00240 - 1.3.5.1,1.3.5.4 0.00000000000000000000000000000000000000000000000000000000001507 208.0
BYD3_k127_1993286_0 Rieske 2Fe-2S - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000822 462.0
BYD3_k127_1993286_1 Protein tyrosine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002202 319.0
BYD3_k127_1993286_2 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.00000000000000000000000000000000000000000000000000000000003308 205.0
BYD3_k127_1993286_3 ECF sigma factor - - - 0.000000000000000000000000000000000000000000000000002546 187.0
BYD3_k127_1997371_0 Beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000436 324.0
BYD3_k127_1997371_1 Domain of unknown function (DUF4349) - - - 0.00000000000000000000000000000000001364 146.0
BYD3_k127_1997371_2 COG0457 FOG TPR repeat - - - 0.00000000000000000000000000003549 119.0
BYD3_k127_1997973_0 Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation K11085 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006609 563.0
BYD3_k127_1997973_1 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.0000000000000001861 88.0
BYD3_k127_1997973_2 Biopolymer K03559 - - 0.000000004856 58.0
BYD3_k127_2001142_0 OmpA family - - - 6.038e-223 705.0
BYD3_k127_2011612_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 6.582e-209 666.0
BYD3_k127_2011612_1 Alcohol dehydrogenase GroES-like domain K13953 - 1.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000121 443.0
BYD3_k127_2011612_2 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR - - - 0.0000000000000000000000000000000000000000000000000000000000000001528 238.0
BYD3_k127_2011612_3 Barrel-sandwich domain of CusB or HlyD membrane-fusion K07798 - - 0.0000000000000000000000000000000000000000000000000000000000000004216 237.0
BYD3_k127_2011612_5 - - - - 0.000000000000000000000000003827 114.0
BYD3_k127_2011612_6 CHAD - - - 0.00000000000000000000002699 110.0
BYD3_k127_2015095_0 - - - - 0.0000000000000000000000000000000000000000000000000000000001795 210.0
BYD3_k127_2015095_1 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000608 191.0
BYD3_k127_2015095_2 Putative zinc- or iron-chelating domain - - - 0.000000000000000000000003413 111.0
BYD3_k127_2032756_0 COG2939 Carboxypeptidase C (cathepsin A) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005229 361.0
BYD3_k127_2032756_1 Protein of unknown function (DUF2799) - - - 0.000000000000000000000000000000000000005452 153.0
BYD3_k127_2032756_2 methyl-accepting chemotaxis protein K03406,K05875 - - 0.000000000000000001239 89.0
BYD3_k127_2032756_3 Adenylate cyclase - - - 0.0000000007025 64.0
BYD3_k127_2032756_4 Stress responsive A/B Barrel Domain - - - 0.000000001387 65.0
BYD3_k127_2040258_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000009772 259.0
BYD3_k127_2040258_1 Membrane protein involved in the export of O-antigen and teichoic - - - 0.0000000001359 74.0
BYD3_k127_2040258_2 cellulase activity - - - 0.00000008038 57.0
BYD3_k127_2040258_3 O-Antigen ligase - - - 0.000276 53.0
BYD3_k127_2043234_0 Domain of unknown function (DUF3471) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000435 247.0
BYD3_k127_2043234_1 TonB-dependent receptor plug - - - 0.000000000000000000000000000000000000005935 152.0
BYD3_k127_2054375_0 Sigma factor regulatory protein FecR PupR family K07165 - - 0.000000000000000000000000000000000000001858 160.0
BYD3_k127_2054375_1 ECF sigma factor - - - 0.000000000000000000000000004887 117.0
BYD3_k127_2054375_2 receptor - - - 0.000001012 54.0
BYD3_k127_2054801_0 regulatory protein, DeoR K02081 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009886 315.0
BYD3_k127_2054801_1 PFAM NUDIX hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000005134 207.0
BYD3_k127_2054801_2 Las17-binding protein actin regulator - - - 0.0000000000000000000000000000000000000000000000000000000001459 213.0
BYD3_k127_2054801_3 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.0000000479 66.0
BYD3_k127_207472_0 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.0000000000000000000000000000000000000000000000000000000000000481 219.0
BYD3_k127_207472_1 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 GO:0003674,GO:0003824,GO:0005488,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008194,GO:0008289,GO:0008610,GO:0008654,GO:0008915,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016020,GO:0016051,GO:0016740,GO:0016757,GO:0016758,GO:0019637,GO:0019897,GO:0019898,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0046467,GO:0046493,GO:0071704,GO:0071944,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.4.1.182 0.000000000000000000000000000000000000000000000000002245 189.0
BYD3_k127_207472_2 DNA polymerase III alpha subunit K02337 - 2.7.7.7 0.0000000000000000000000000000000000000004674 152.0
BYD3_k127_2077601_0 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.0000000000000000000000000000000000002249 146.0
BYD3_k127_2077601_1 WD40 domain protein beta Propeller K12132 - 2.7.11.1 0.000000000000000000000000000958 120.0
BYD3_k127_2077601_2 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity - - - 0.000000000000000000004533 100.0
BYD3_k127_2085243_0 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002984 374.0
BYD3_k127_2085243_1 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000293 254.0
BYD3_k127_2094990_0 Domain of unknown function (DUF1611_N) Rossmann-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002127 385.0
BYD3_k127_2094990_1 Na melibiose symporter and related transporters K03292 - - 0.0000000000000000000000000000000000000000008362 164.0
BYD3_k127_2094990_2 amino acid K03294 - - 0.0002033 46.0
BYD3_k127_2097412_0 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 - 1.9.3.1 9.387e-194 608.0
BYD3_k127_2097412_1 cytochrome c oxidase (Subunit II) K02275 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001542 532.0
BYD3_k127_2104799_0 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008425 410.0
BYD3_k127_2104799_1 AraC-type transcriptional regulator N-terminus - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004254 326.0
BYD3_k127_2109677_0 AhpC/TSA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003102 361.0
BYD3_k127_2109677_1 SH3 domain protein K07184 - - 0.000000000000000000000000000008555 126.0
BYD3_k127_2117054_0 VIT family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001009 469.0
BYD3_k127_2117054_1 peptidase dimerisation domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002591 312.0
BYD3_k127_2117054_2 Rhomboid family - - - 0.000000000000000000000000000000000000001419 149.0
BYD3_k127_2122731_0 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain K00609 - 2.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007596 293.0
BYD3_k127_2122731_1 Belongs to the UPF0301 (AlgH) family K07735 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000009438 223.0
BYD3_k127_2122731_2 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 GO:0000966,GO:0000967,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 - 0.0000000000000000000000000003017 120.0
BYD3_k127_2122731_3 Periplasmic protein TonB links inner and outer membranes K03832 - - 0.0000000000000000000001108 103.0
BYD3_k127_212379_0 Stage II sporulation protein E - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003915 269.0
BYD3_k127_212379_1 Response regulator receiver - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000008989 254.0
BYD3_k127_212379_2 PFAM ATP-binding region, ATPase domain protein K17752 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000013 186.0
BYD3_k127_212379_3 Anti-anti-sigma regulatory factor (Antagonist of anti-sigma factor) K17762 - - 0.000000000000325 70.0
BYD3_k127_2125274_0 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004507 496.0
BYD3_k127_2125274_1 DNA segregation ATPase FtsK SpoIIIE K03466 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001662 390.0
BYD3_k127_2125274_2 Peptidogalycan biosysnthesis/recognition K09919 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001853 371.0
BYD3_k127_2125274_3 Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine K00684 - 2.3.2.6 0.000000000000000000000000000000000000000000000000000000000000000003348 236.0
BYD3_k127_2157058_0 PAP2 superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008712 533.0
BYD3_k127_2157058_1 - - - - 0.000000000000000000000000000000000000000000000000000002601 203.0
BYD3_k127_2157058_2 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000002943 206.0
BYD3_k127_2157058_3 - - - - 0.00000000000000000000000000000000001869 139.0
BYD3_k127_223_0 TonB dependent receptor K02014 - - 2.49e-260 826.0
BYD3_k127_223_1 PFAM regulatory protein MarR - - - 0.000000000000000000000000000000000000009675 149.0
BYD3_k127_2276592_0 Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins K02462 - - 0.000000000000000001396 91.0
BYD3_k127_2276592_1 Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins K02461 - - 0.0000000000009391 77.0
BYD3_k127_2276592_2 Type II secretion system (T2SS), protein N K02463 GO:0002790,GO:0006810,GO:0008104,GO:0008150,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0032940,GO:0033036,GO:0042886,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0071702,GO:0071705 - 0.00000008894 61.0
BYD3_k127_2276822_0 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 GO:0000976,GO:0001067,GO:0001130,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006282,GO:0006351,GO:0006355,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009432,GO:0009605,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0009991,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031668,GO:0032774,GO:0032991,GO:0032993,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0042802,GO:0043170,GO:0043565,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0045892,GO:0045934,GO:0046483,GO:0048519,GO:0048523,GO:0048583,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051716,GO:0060255,GO:0065007,GO:0071496,GO:0071704,GO:0080090,GO:0080134,GO:0080135,GO:0090304,GO:0097159,GO:0097659,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2001020,GO:2001141 3.4.21.88 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002377 271.0
BYD3_k127_2276822_1 Type II transport protein GspH K08084 - - 0.00000000000000002021 90.0
BYD3_k127_2276822_2 TIGRFAM type IV pilus modification protein PilV K02671 - - 0.000000000002879 74.0
BYD3_k127_2279388_0 Oxidizes proline to glutamate for use as a carbon and nitrogen source K13821 - 1.2.1.88,1.5.5.2 0.0 1214.0
BYD3_k127_2279388_1 PFAM Phosphoglycerate mutase K08296 - - 0.000000008057 58.0
BYD3_k127_2279638_0 DEAD-box RNA helicase involved in RNA degradation. Has RNA-dependent ATPase activity and unwinds double-stranded RNA K03732 - 3.6.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005461 446.0
BYD3_k127_2279638_1 Belongs to the thioredoxin family K03671 - - 0.0000000000000000000000000000000000000000002615 161.0
BYD3_k127_2294860_0 Aminotransferase class I and II - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008324 540.0
BYD3_k127_2294860_1 Belongs to the type-B carboxylesterase lipase family K03929 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007573 415.0
BYD3_k127_2294860_2 TonB-dependent Receptor Plug Domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005008 272.0
BYD3_k127_2294860_3 Integrin alpha (beta-propellor repeats). - - - 0.00000000000000000000000000000000000000000000000000000000000000002489 248.0
BYD3_k127_2294860_4 - - - - 0.000000000000000000000000000007299 121.0
BYD3_k127_2300799_0 serine threonine protein kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000492 295.0
BYD3_k127_2306215_0 TonB dependent receptor - - - 3.483e-304 960.0
BYD3_k127_2306215_1 Beta-lactamase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002963 345.0
BYD3_k127_2306215_2 Dicarboxylate carrier protein MatC N-terminus - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001633 342.0
BYD3_k127_2306215_3 Belongs to the proline racemase family K12658 - 5.1.1.8 0.00000000000000000000000000000000000000000000000000498 187.0
BYD3_k127_2306215_4 Branched-chain amino acid permease - - - 0.00000000000000000000000000000000000000000000000003076 188.0
BYD3_k127_2306215_5 UTRA domain - - - 0.0000000000000000000000000001249 125.0
BYD3_k127_2306215_6 belongs to the sigma-70 factor family, ECF subfamily K03088 - - 0.000000000000000009807 91.0
BYD3_k127_2306215_7 Branched-chain amino acid transport protein (AzlD) - - - 0.0000000002648 72.0
BYD3_k127_2320815_0 C-terminus of AA_permease K03294 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003336 474.0
BYD3_k127_2320815_1 transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000001135 201.0
BYD3_k127_2320815_2 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain - - - 0.000000000000000000000000000000000000000003421 158.0
BYD3_k127_2325484_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002762 357.0
BYD3_k127_2325484_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002245 342.0
BYD3_k127_2326570_0 FAD dependent oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007464 407.0
BYD3_k127_2326570_1 BFD-like [2Fe-2S] binding domain - - - 0.00000000000000000003706 96.0
BYD3_k127_2326570_2 LysR substrate binding domain - - - 0.00000000000213 69.0
BYD3_k127_2326570_3 ATP synthesis coupled electron transport - - - 0.00000000007299 71.0
BYD3_k127_2333085_0 PFAM ATP-binding region, ATPase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002681 320.0
BYD3_k127_2333085_1 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001585 265.0
BYD3_k127_2338429_0 Domain of unknown function (DUF4136) - - - 0.00000000000000000000000000000000007078 141.0
BYD3_k127_2338429_1 type I secretion outer membrane protein, TolC K12340 - - 0.00000000000000000000000000000002458 130.0
BYD3_k127_2338429_2 TIGRFAM Hydrogenase accessory protein HypB K04652 - - 0.0000000000000003255 84.0
BYD3_k127_2339134_0 argininosuccinate lyase K01755 GO:0003674,GO:0003824,GO:0004056,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016829,GO:0016840,GO:0016842,GO:0019752,GO:0042450,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.3.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001953 329.0
BYD3_k127_2339134_1 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000002524 211.0
BYD3_k127_2339134_2 PFAM thioesterase superfamily protein K19222 - 3.1.2.28 0.00000000000000000000000000000000000000000004806 169.0
BYD3_k127_2339134_3 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 GO:0003674,GO:0003824,GO:0003991,GO:0005488,GO:0005515,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016597,GO:0016740,GO:0016772,GO:0016774,GO:0019752,GO:0031406,GO:0034618,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.8 0.00000000000000000000000000738 114.0
BYD3_k127_2343717_0 Belongs to the Orn Lys Arg decarboxylase class-II family K00928,K12526 - 2.7.2.4,4.1.1.20 6.765e-270 851.0
BYD3_k127_2343717_1 N-terminal half of MaoC dehydratase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009227 347.0
BYD3_k127_2343717_2 PFAM S-adenosyl-l-methionine hydroxide adenosyltransferase K22205 - - 0.00000000000000000000000000000000000000000000002137 183.0
BYD3_k127_2351722_0 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004016 424.0
BYD3_k127_2351722_1 serine threonine protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000004845 207.0
BYD3_k127_2351722_2 CheY-like receiver AAA-type ATPase and DNA-binding domains - - - 0.0000000000000003363 80.0
BYD3_k127_2354690_0 Belongs to the glutathione peroxidase family K00432 - 1.11.1.9 0.00000000000000000000000000000000000000000000000000001705 192.0
BYD3_k127_2354690_1 Membrane protein implicated in regulation of membrane protease activity K07340 - - 0.00000000000002009 77.0
BYD3_k127_2361173_0 TonB-dependent Receptor Plug Domain K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000075 609.0
BYD3_k127_2361173_1 TonB dependent receptor K02014,K16089 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009818 487.0
BYD3_k127_2361173_2 Protein tyrosine kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001471 406.0
BYD3_k127_2361173_3 PFAM regulatory protein TetR - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001051 357.0
BYD3_k127_2363457_0 D-galactarate dehydratase / Altronate hydrolase, C terminus K01685,K01708 - 4.2.1.42,4.2.1.7 6.206e-199 630.0
BYD3_k127_2363457_1 TRAP-type C4-dicarboxylate transport system, large permease component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000163 591.0
BYD3_k127_2363457_2 TRAP-type C4-dicarboxylate transport system small permease component - - - 0.00000000000000000000000000000000000000522 151.0
BYD3_k127_2371619_0 4-alpha-glucanotransferase K00705,K06044 - 2.4.1.25,5.4.99.15 2.139e-297 947.0
BYD3_k127_2371619_1 Belongs to the glycosyl hydrolase 13 family K01214 - 3.2.1.68 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002322 273.0
BYD3_k127_2371619_2 Domain of unknown function (DUF1857) - - - 0.00000000000000000003517 97.0
BYD3_k127_2377225_0 Peptidoglycan polymerase that is essential for cell division K03588 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003155 390.0
BYD3_k127_2377225_1 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001619 387.0
BYD3_k127_2377225_2 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001607 321.0
BYD3_k127_2377225_3 Belongs to the MurCDEF family K01924 - 6.3.2.8 0.000000000000000000002839 108.0
BYD3_k127_2377951_0 COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II K00666 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003922 612.0
BYD3_k127_2377951_1 TonB dependent receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006732 494.0
BYD3_k127_2377951_2 Uncharacterized protein conserved in bacteria (DUF2236) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002229 385.0
BYD3_k127_2377951_3 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001463 275.0
BYD3_k127_2396072_0 Phospholipase D Active site motif K01115 - 3.1.4.4 1.478e-213 681.0
BYD3_k127_2396072_1 endonuclease exonuclease phosphatase - - - 0.00000000000000000000000000000000000000005488 157.0
BYD3_k127_2401029_0 amino acid K03294 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001397 509.0
BYD3_k127_2401029_1 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002476 385.0
BYD3_k127_2401029_2 Protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004519 331.0
BYD3_k127_2401029_3 Dual specificity phosphatase, catalytic domain - - - 0.00000000000000000000000000000000000000001982 170.0
BYD3_k127_2401029_4 SelR domain - - - 0.0000000000000000000000000000000000003387 143.0
BYD3_k127_2401029_5 ADP-ribosylglycohydrolase K05521 - 3.2.2.24 0.0000000000000000000000001872 121.0
BYD3_k127_2401667_0 PFAM Asparaginase glutaminase K01424 - 3.5.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000162 466.0
BYD3_k127_2401667_1 TIGRFAM amidohydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007577 422.0
BYD3_k127_2401667_2 amino acid aldolase or racemase K20757 - 4.3.1.27 0.0000000000000000000000000000000000000000000000000000000004721 208.0
BYD3_k127_2406901_0 LysR substrate binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007293 343.0
BYD3_k127_2406901_1 Nickel/cobalt transporter regulator - - - 0.00000000000000000001417 97.0
BYD3_k127_2406901_2 Carboxymuconolactone decarboxylase family - - - 0.000000000000006045 76.0
BYD3_k127_2406901_3 - - - - 0.00000001204 63.0
BYD3_k127_2408399_0 Transcriptional regulator, HxlR family - - - 0.000000000000000000000000000000000000000000000000000000000000002376 232.0
BYD3_k127_2423777_0 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 GO:0006082,GO:0006520,GO:0006566,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009987,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0071704,GO:1901564,GO:1901605 4.3.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000001072 268.0
BYD3_k127_2423777_1 Aminotransferase class-V - - - 0.000000000000000000000000000000000000000000006812 177.0
BYD3_k127_2432877_0 Belongs to the ComB family K05979 - 3.1.3.71 0.0000000000000000000000000000000000000000000000000000000000004524 218.0
BYD3_k127_2432877_1 Putative member of DMT superfamily (DUF486) - - - 0.00000000000000000000000000000000000000000000000000007934 190.0
BYD3_k127_2432877_2 Protein of unknown function, DUF255 K06888 - - 0.0000000000000000000000000000000000001224 146.0
BYD3_k127_2432877_3 adenosine 5'-monophosphoramidase activity - - - 0.000000000000000000000000000000000001179 143.0
BYD3_k127_2432877_4 TfoX N-terminal domain K07343 - - 0.00000000001513 71.0
BYD3_k127_2446746_0 Belongs to the flagella basal body rod proteins family K02392 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002467 417.0
BYD3_k127_2446746_1 Belongs to the flagella basal body rod proteins family K02391 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000468 246.0
BYD3_k127_2446746_2 Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation K02393 - - 0.000000000000000000000000000000000000004529 163.0
BYD3_k127_2471036_0 Thiamine pyrophosphate enzyme, C-terminal TPP binding K00179 - 1.2.7.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008095 579.0
BYD3_k127_2471036_1 PFAM cytochrome B561 - - - 0.00000000000000000000000000000000000000000000000000002705 200.0
BYD3_k127_2471036_2 cytochrome C peroxidase - - - 0.0000000000000000000000000000000000009852 139.0
BYD3_k127_2471036_3 Peptidase propeptide and YPEB domain - - - 0.00000000000000000000000002594 110.0
BYD3_k127_2476147_0 TonB-dependent receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002173 334.0
BYD3_k127_2476147_1 the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription K03088 - - 0.0000004804 57.0
BYD3_k127_2476147_2 Domain of unknown function (DUF4880) K07165 - - 0.000452 51.0
BYD3_k127_2478097_0 UDP binding domain K00066 - 1.1.1.132 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003409 550.0
BYD3_k127_2478097_1 Glycosyl transferase 4-like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006354 483.0
BYD3_k127_2486338_0 Belongs to the IlvD Edd family K01687 - 4.2.1.9 8.936e-250 781.0
BYD3_k127_2486338_1 PFAM Pyruvate carboxyltransferase K01640,K18314 - 4.1.3.4,4.1.3.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001182 368.0
BYD3_k127_2486338_2 Electron transfer flavoprotein K03522 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002497 321.0
BYD3_k127_2486338_3 Peroxiredoxin K03386 - 1.11.1.15 0.00000000000000000000000000000000000000000000000000000000000004075 229.0
BYD3_k127_2486338_4 FCD - - - 0.0000000000000000000000000000000000000000000000001322 184.0
BYD3_k127_2492352_0 Bacterial protein of unknown function (DUF885) - - - 1.491e-214 681.0
BYD3_k127_2492352_1 TonB dependent receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001093 469.0
BYD3_k127_2498960_0 Chemotaxis protein histidine kinase K03407 GO:0000160,GO:0003674,GO:0003824,GO:0004672,GO:0004673,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006935,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009605,GO:0009892,GO:0009893,GO:0009987,GO:0010562,GO:0010604,GO:0010605,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016775,GO:0018106,GO:0018193,GO:0018202,GO:0019220,GO:0019222,GO:0019538,GO:0023014,GO:0023052,GO:0031323,GO:0031324,GO:0031325,GO:0031399,GO:0031400,GO:0031401,GO:0032101,GO:0032268,GO:0032269,GO:0032270,GO:0032879,GO:0032991,GO:0035303,GO:0035304,GO:0035306,GO:0035307,GO:0035556,GO:0036211,GO:0040011,GO:0040012,GO:0042221,GO:0042330,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0045937,GO:0046777,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0050789,GO:0050794,GO:0050896,GO:0050920,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051179,GO:0051234,GO:0051246,GO:0051247,GO:0051248,GO:0051270,GO:0051641,GO:0051649,GO:0051716,GO:0060255,GO:0065007,GO:0071704,GO:0071944,GO:0080090,GO:0098561,GO:0140096,GO:1901564,GO:1901873,GO:1901875,GO:1902021,GO:2000145 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005503 598.0
BYD3_k127_2498960_1 chemotaxis sensory transducer K03406,K05874 - - 0.000000000000000001199 96.0
BYD3_k127_2503931_0 Vitamin K epoxide reductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003015 308.0
BYD3_k127_2503931_1 Domain of unknown function (DUF1993) K09983 - - 0.000000000000000000000000000000000000000000000000000000000003165 212.0
BYD3_k127_2503931_2 PAP2 superfamily - - - 0.000000000000000000000000000000000000000000000000002484 191.0
BYD3_k127_2503931_3 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000000000000000000000000000001163 133.0
BYD3_k127_2504928_0 TonB-dependent receptor plug - - - 1.515e-269 848.0
BYD3_k127_2504928_1 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K06978 - - 0.000000000000000000000000000000000000000000000000000000000000005907 228.0
BYD3_k127_2510209_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 7.36e-293 914.0
BYD3_k127_2521436_0 PFAM FAD dependent oxidoreductase K00111 - 1.1.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002152 307.0
BYD3_k127_2521436_1 PFAM glycosyl transferase family 39 - - - 0.0000000008838 71.0
BYD3_k127_2543216_0 Belongs to the pseudouridine synthase RsuA family K06182 - 5.4.99.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007957 315.0
BYD3_k127_2543216_1 diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001963 271.0
BYD3_k127_2543216_2 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis K00287,K18590 GO:0000166,GO:0003674,GO:0003824,GO:0004146,GO:0005488,GO:0005542,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008144,GO:0008150,GO:0008152,GO:0016491,GO:0016645,GO:0016646,GO:0019842,GO:0031406,GO:0033218,GO:0036094,GO:0042221,GO:0042493,GO:0043167,GO:0043168,GO:0043177,GO:0044424,GO:0044444,GO:0044464,GO:0048037,GO:0050661,GO:0050662,GO:0050896,GO:0051870,GO:0051871,GO:0055114,GO:0070401,GO:0070402,GO:0072341,GO:0097159,GO:1901265,GO:1901363 1.5.1.3 0.0000000000000000000000000000000000000000000006504 181.0
BYD3_k127_2543216_3 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain K07117 - - 0.000000000000000000000000000000000000000000001437 170.0
BYD3_k127_2543216_4 Putative zinc- or iron-chelating domain K06940 - - 0.00000000000000000000000000000001295 130.0
BYD3_k127_2543216_5 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis K00560 - 2.1.1.45 0.000000000000000000000008898 100.0
BYD3_k127_2557275_0 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K01281 - 3.4.14.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002491 495.0
BYD3_k127_2557275_1 acetyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000166 220.0
BYD3_k127_2557275_2 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K01281 - 3.4.14.11 0.000000000000000000000000000000005734 134.0
BYD3_k127_2557275_3 Dienelactone hydrolase family - - - 0.000000000000000000000000000127 122.0
BYD3_k127_2588914_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004082 393.0
BYD3_k127_2588914_1 Belongs to the CarB family K01955 - 6.3.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000002438 252.0
BYD3_k127_2588914_2 Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit K02427 GO:0000027,GO:0000154,GO:0000451,GO:0000453,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008173,GO:0008649,GO:0008650,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016072,GO:0016436,GO:0016740,GO:0016741,GO:0022607,GO:0022613,GO:0022618,GO:0031167,GO:0032259,GO:0034470,GO:0034622,GO:0034641,GO:0034660,GO:0042254,GO:0042255,GO:0042273,GO:0043170,GO:0043412,GO:0043414,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.166 0.0000000000000000000000000000000000000000000000000000000000000000000000004577 251.0
BYD3_k127_2588914_3 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.0000000000000000000000000000000000000000000000000000000000000279 217.0
BYD3_k127_2588914_4 RNA-binding protein K07574 - - 0.00000000000000000000004279 103.0
BYD3_k127_2588914_5 Domain of unknown function (DUF4149) - - - 0.0000000003209 68.0
BYD3_k127_2592567_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 1.329e-231 729.0
BYD3_k127_2592567_1 Belongs to the Smg family K03747 - - 0.00000000000000000000000000000000000000001105 160.0
BYD3_k127_2613792_0 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001049 353.0
BYD3_k127_2613792_1 - - - - 0.00000000000000000000000000000000000000000000000000000001193 203.0
BYD3_k127_2613792_2 Thioredoxin-like - - - 0.00000000000000000000000000000000000000000000004021 176.0
BYD3_k127_2615625_0 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000001565 225.0
BYD3_k127_2615625_1 helix_turn_helix, arabinose operon control protein K07506 - - 0.0000000000000000000000000000000000001093 153.0
BYD3_k127_2615625_2 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000001822 108.0
BYD3_k127_2616119_0 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005853 385.0
BYD3_k127_2616119_1 hydrolase activity, acting on ester bonds - - - 0.000000000000000000000000000000000000000000458 168.0
BYD3_k127_2616119_2 TonB dependent receptor K02014 - - 0.00000001436 58.0
BYD3_k127_2616119_3 PFAM SMP-30 Gluconolaconase K14274 - - 0.0001215 55.0
BYD3_k127_2634530_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes K03089 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001221 361.0
BYD3_k127_2634530_1 Part of the ABC transporter FtsEX involved in cellular division K09811 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002769 271.0
BYD3_k127_2634530_2 Belongs to the ompA family - - - 0.000000000000000000000000000000000000000000000000000000000000001956 221.0
BYD3_k127_2634530_3 TIGRFAM Cell division ATP-binding protein FtsE K09812 - - 0.0000000000000000008201 88.0
BYD3_k127_2641806_0 Amidohydrolase K10220 - 4.2.1.83 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001653 586.0
BYD3_k127_2641806_1 PrpF protein K16514 - 5.3.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002199 477.0
BYD3_k127_2641806_2 metal-dependent hydrolase of the TIM-barrel fold K10221 - 3.1.1.57 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009108 398.0
BYD3_k127_2641806_3 Aldolase/RraA K02553,K10218 - 4.1.3.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001081 322.0
BYD3_k127_2641806_4 COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003758 262.0
BYD3_k127_2641806_5 LysR substrate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000002786 232.0
BYD3_k127_2642527_0 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000105 391.0
BYD3_k127_2642527_1 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000066 223.0
BYD3_k127_2642527_2 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 GO:0000725,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008821,GO:0009058,GO:0009059,GO:0009314,GO:0009628,GO:0009987,GO:0016787,GO:0016788,GO:0016889,GO:0016894,GO:0031297,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0045005,GO:0046483,GO:0048476,GO:0050896,GO:0051716,GO:0071704,GO:0071932,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901576 3.1.22.4 0.000000000000000000000000000000000000000000103 166.0
BYD3_k127_2653858_0 hydrolase activity, acting on ester bonds K22369 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000644 354.0
BYD3_k127_2653858_1 membrane transporter protein K07090 - - 0.00000000000000000000000000000000000000000000000000000000000000000000008907 247.0
BYD3_k127_2653858_2 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K13775 - - 0.00000000000000000000000000000000000000000000000000000000005673 208.0
BYD3_k127_2653858_3 Protein of unknown function (DUF3089) - - - 0.0000000000000000000000000002069 119.0
BYD3_k127_2654203_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000002565 228.0
BYD3_k127_2654203_1 COG1228 Imidazolonepropionase and related amidohydrolases - - - 0.00000000000000000000000000000000000000000000000000000000001022 216.0
BYD3_k127_2664082_0 Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions K21071 - 2.7.1.11,2.7.1.90 2.411e-206 666.0
BYD3_k127_2664082_1 Reutilizes the intact tripeptide L-alanyl-gamma-D- glutamyl-meso-diaminopimelate by linking it to UDP-N- acetylmuramate K02558 - 6.3.2.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000282 569.0
BYD3_k127_2664082_2 Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides K03684 - 3.1.13.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002837 304.0
BYD3_k127_2664082_3 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.0000000000000000000000000000000000000000000000000000000000000000000002556 248.0
BYD3_k127_2664082_4 PFAM peptidase S16 lon domain protein K07157 - - 0.000000000000000000000000000000000000000000000000000000000008155 219.0
BYD3_k127_2664082_5 PFAM CAAX amino terminal protease family K07052 - - 0.000000000000000000000000000000000000000000000002867 184.0
BYD3_k127_2664082_6 - - - - 0.0000000000001643 76.0
BYD3_k127_268229_0 DEAD DEAH box helicase K03724 - - 7.944e-288 894.0
BYD3_k127_2682594_0 Belongs to the pirin family K06911 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008091 381.0
BYD3_k127_2682594_1 DSBA-like thioredoxin domain K14584 - 5.99.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002359 274.0
BYD3_k127_2682594_2 Protein of unknown function (DUF3187) - - - 0.0000000000000006506 89.0
BYD3_k127_2687542_0 histidine kinase HAMP region domain protein - - - 6.686e-242 765.0
BYD3_k127_2687542_1 PFAM response regulator receiver - - - 0.0000000000000000000000000000000000000000000000000000000000000000429 230.0
BYD3_k127_2692126_0 TonB-dependent Receptor Plug Domain K02014 - - 3.702e-253 800.0
BYD3_k127_2692126_1 Belongs to the type-B carboxylesterase lipase family K03929 - - 2.704e-206 653.0
BYD3_k127_2692126_2 COG0477 Permeases of the major facilitator superfamily - - - 6.122e-198 625.0
BYD3_k127_2692126_3 Amidohydrolase family K06015 - 3.5.1.81 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000124 370.0
BYD3_k127_2700547_0 PFAM adenylyl cyclase class-3 4 guanylyl cyclase - - - 7.476e-255 831.0
BYD3_k127_2700547_1 COG0457 FOG TPR repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003914 491.0
BYD3_k127_2700547_2 Reduces the stability of FtsZ polymers in the presence of ATP K06916 - - 0.00000000000000000000000000000000000000000004271 163.0
BYD3_k127_2715700_0 His Kinase A (phosphoacceptor) domain - - - 2.83e-229 732.0
BYD3_k127_2715700_1 glutamine metabolic process K01951,K22314 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0006873,GO:0006875,GO:0006878,GO:0006879,GO:0008150,GO:0009987,GO:0016787,GO:0016810,GO:0016811,GO:0019725,GO:0030003,GO:0031974,GO:0031981,GO:0034399,GO:0042592,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0046916,GO:0048878,GO:0050801,GO:0055065,GO:0055070,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0065007,GO:0065008,GO:0070013,GO:0098771 3.4.19.16,6.3.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002865 295.0
BYD3_k127_2715700_2 Domain of unknown function (DUF4147) K11529 - 2.7.1.165 0.0000000000000000000000000000000000000000000000000000006294 205.0
BYD3_k127_2715700_3 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000002302 111.0
BYD3_k127_2733769_0 Alpha/beta hydrolase family K01563 - 3.8.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003577 439.0
BYD3_k127_2733769_1 Exodeoxyribonuclease III K01142 - 3.1.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003179 355.0
BYD3_k127_2738363_0 Catalytic LigB subunit of aromatic ring-opening dioxygenase K04099,K04101 - 1.13.11.57,1.13.11.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006197 475.0
BYD3_k127_2738363_1 Oxidoreductase K10219 - 1.1.1.312 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001363 399.0
BYD3_k127_2738363_2 Aromatic-ring-opening dioxygenase LigAB, LigA subunit K04100 - 1.13.11.8 0.000000000000000000000000000000000000000000000000000000005538 201.0
BYD3_k127_2738363_3 Amidohydrolase - - - 0.00000000000000000000000000000000000000000000206 164.0
BYD3_k127_275372_0 Nitronate monooxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003872 478.0
BYD3_k127_275372_1 Phosphoenolpyruvate phosphomutase - - - 0.000000000000000000000000000000000000000000000000000005051 192.0
BYD3_k127_275372_2 Amidohydrolase family - - - 0.000000000000000000629 93.0
BYD3_k127_2753922_0 Prolyl oligopeptidase - - - 1.952e-210 669.0
BYD3_k127_2753922_1 Membrane - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004126 344.0
BYD3_k127_2757997_0 Positively regulates the transcription of the maltose regulon whose gene products are responsible for uptake and catabolism of malto-oligosaccharides. Binds and recognizes a DNA motif (called the malT box) 5'-GGA TG GA-3' K03556 - - 1.915e-257 823.0
BYD3_k127_2757997_1 Belongs to the UPF0312 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000008408 253.0
BYD3_k127_2757997_2 Pectinacetylesterase - - - 0.0000000000000000000000000000000000000000000000000000000000005231 226.0
BYD3_k127_2768252_0 Glycosyl Hydrolase Family 88 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002664 445.0
BYD3_k127_2768252_1 Belongs to the glycosyl hydrolase 2 family K01195 - 3.2.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004489 290.0
BYD3_k127_2768252_2 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity - - - 0.00000000000000000000000000000000000000000000000000003358 190.0
BYD3_k127_2789381_0 Belongs to the NAD(P)-dependent epimerase dehydratase family K01784,K12448 - 5.1.3.2,5.1.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004621 478.0
BYD3_k127_2789381_1 A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002666 424.0
BYD3_k127_2789381_2 - - - - 0.00000000000000000000001353 115.0
BYD3_k127_2803184_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001605 593.0
BYD3_k127_2803184_1 Cys/Met metabolism PLP-dependent enzyme K01739 - 2.5.1.48 0.00000000000000000000000000000000000000000000000000000000000000000000000003106 259.0
BYD3_k127_2803184_2 Protein of unknown function (DUF421) - - - 0.000000000000000000000000000000000000000000001336 179.0
BYD3_k127_2803184_3 - - - - 0.0000000000000000000000005188 111.0
BYD3_k127_2820378_0 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001201 260.0
BYD3_k127_2820378_1 Ornithine cyclodeaminase/mu-crystallin family K01750,K19244,K19743 - 1.4.1.1,1.5.1.1,4.3.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000008074 263.0
BYD3_k127_2820378_2 Protein of unknown function (DUF2891) - - - 0.000000000000000000000000000138 116.0
BYD3_k127_2820378_3 Bacterial transcription activator, effector binding domain - - - 0.000000000000000009431 89.0
BYD3_k127_2825990_0 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005518 395.0
BYD3_k127_2828020_0 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001129 577.0
BYD3_k127_2828020_1 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000002879 238.0
BYD3_k127_2828020_2 binds to the 23S rRNA K02876 - - 0.00000000000000000000000000000000000000000000005189 173.0
BYD3_k127_2828020_3 TIGRFAM ribosomal protein L30 K02907 - - 0.000000000000006868 78.0
BYD3_k127_28322_0 Succinylglutamate desuccinylase / Aspartoacylase family K06987 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002948 419.0
BYD3_k127_28322_1 Catalyzes the biosynthesis of agmatine from arginine K01585 - 4.1.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002345 272.0
BYD3_k127_28322_2 Methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000008548 269.0
BYD3_k127_28322_3 Belongs to the Nudix hydrolase family K01515 - 3.6.1.13 0.0000000000000000000000000000000000000000000000000000000000293 211.0
BYD3_k127_28322_4 - - - - 0.0000000000000000000000000000000000001071 151.0
BYD3_k127_28322_5 COG0724 RNA-binding proteins (RRM domain) - - - 0.00000000000000000000000000003117 122.0
BYD3_k127_28322_6 Uncharacterized protein family UPF0016 - - - 0.000000000000000000000001314 109.0
BYD3_k127_2838623_0 cytochrome C peroxidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001155 371.0
BYD3_k127_2838623_1 alpha/beta hydrolase fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003715 254.0
BYD3_k127_2838623_2 mechanosensitive ion channel K03442 - - 0.000000000000000000000000000000000000000000000000000000000000000000008415 241.0
BYD3_k127_2843437_0 Transmembrane secretion effector - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001557 445.0
BYD3_k127_2843437_1 Domain of unknown function (DUF4440) - - - 0.00000000000000000000001043 105.0
BYD3_k127_2843437_2 - K01992 - - 0.0000000008085 64.0
BYD3_k127_2870604_0 PFAM TrkA-N domain K03499 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005846 548.0
BYD3_k127_2870604_1 Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA K03498 GO:0003674,GO:0005215,GO:0005216,GO:0005261,GO:0005267,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0008150,GO:0008324,GO:0009987,GO:0015075,GO:0015077,GO:0015079,GO:0015267,GO:0015318,GO:0015672,GO:0016020,GO:0016021,GO:0022803,GO:0022838,GO:0022857,GO:0022890,GO:0030001,GO:0030955,GO:0031224,GO:0031226,GO:0031420,GO:0034220,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0044425,GO:0044459,GO:0044464,GO:0046872,GO:0046873,GO:0046983,GO:0051179,GO:0051234,GO:0055085,GO:0071804,GO:0071805,GO:0071944,GO:0098655,GO:0098660,GO:0098662 - 0.0000000000000000000000000000000000000000000000000005748 196.0
BYD3_k127_2870604_2 Unwinds DNA duplexes with 3' to 5' polarity with respect to the bound strand and initiates unwinding most effectively when a single-stranded region is present K03657 - 3.6.4.12 0.000000000000000002733 85.0
BYD3_k127_2882190_0 Methylenetetrahydrofolate reductase K00297 - 1.5.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007209 289.0
BYD3_k127_2882190_1 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.000000000000000000000000000000000000000000000000000000002853 210.0
BYD3_k127_2882190_2 Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress K04083 - - 0.00000000000007268 72.0
BYD3_k127_2884006_0 Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate K01712 - 4.2.1.49 1.482e-298 925.0
BYD3_k127_2884006_1 Amidohydrolase family K01468 - 3.5.2.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001652 466.0
BYD3_k127_2884006_2 deiminase K05603 - 3.5.3.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005851 468.0
BYD3_k127_2884006_3 Predicted membrane protein (DUF2214) K08983 - - 0.00000000000000000000000000000000000000000005043 165.0
BYD3_k127_2884006_4 N-formylglutamate amidohydrolase K01458,K01479 - 3.5.1.68,3.5.3.8 0.00000000000000000000000283 113.0
BYD3_k127_2884006_5 PQ loop repeat K15383 - - 0.0000000000000005613 90.0
BYD3_k127_2884006_6 - - - - 0.00000007335 54.0
BYD3_k127_2884006_7 Outer membrane protein peptidoglycan-associated (Lipo)protein K03286 - - 0.00000131 59.0
BYD3_k127_2899198_0 Prolyl oligopeptidase family - - - 2.782e-226 715.0
BYD3_k127_2899198_1 COG1228 Imidazolonepropionase and related amidohydrolases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001533 530.0
BYD3_k127_2904476_0 TonB dependent receptor - - - 5.3e-322 1012.0
BYD3_k127_2904476_1 PFAM SMP-30 Gluconolaconase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001181 380.0
BYD3_k127_2904476_2 Calcium/calmodulin dependent protein kinase II association domain - - - 0.00000000000000000000000000000000004225 139.0
BYD3_k127_2904476_3 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal K00457 - 1.13.11.27 0.000000000000000000000000000000000235 137.0
BYD3_k127_2904476_4 helix_turn_helix, arabinose operon control protein - - - 0.0000000000000000002093 99.0
BYD3_k127_2913482_0 ATP-dependent helicase HrpB K03579 - 3.6.4.13 9.492e-253 825.0
BYD3_k127_2913482_1 Major Facilitator - - - 1.511e-249 782.0
BYD3_k127_2913482_2 Beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004715 396.0
BYD3_k127_2915796_0 Domain of unknown function (DUF4010) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002763 372.0
BYD3_k127_2915796_1 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002444 306.0
BYD3_k127_2915796_2 D-alanyl-D-alanine carboxypeptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001512 246.0
BYD3_k127_2915796_3 KR domain - - - 0.00000000000000000000000000000000000000000000000005378 201.0
BYD3_k127_2915796_4 Diguanylate cyclase - - - 0.000000000000002636 89.0
BYD3_k127_2924660_0 DsrE/DsrF-like family K07235 - - 0.000000000000000000000000000000000000000000000000000000002708 202.0
BYD3_k127_2924660_1 Protein of unknown function (DUF1428) - - - 0.00000000000000000000000000000000000000000000000000000001041 200.0
BYD3_k127_2924660_2 - - - - 0.0000000000000000000000000000000000001512 147.0
BYD3_k127_2924660_3 DsrE/DsrF-like family - - - 0.000000000000000000000000000000000006956 144.0
BYD3_k127_2924660_4 DsrE/DsrF-like family - - - 0.000000000000000000001109 98.0
BYD3_k127_2924660_5 Zn-dependent protease - - - 0.00000000000001502 73.0
BYD3_k127_2924660_6 - - - - 0.000000000007044 76.0
BYD3_k127_2928363_0 NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form K12410 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005142 332.0
BYD3_k127_2928363_1 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.000000000000000000000000000001307 124.0
BYD3_k127_2935507_0 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006569 306.0
BYD3_k127_2935507_1 PFAM LppC K07121 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002888 282.0
BYD3_k127_2935507_2 - - - - 0.000000000000000007667 87.0
BYD3_k127_2937016_0 Cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001285 342.0
BYD3_k127_2937016_1 - - - - 0.0004192 48.0
BYD3_k127_29432_0 TAP-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001866 388.0
BYD3_k127_29432_1 ABC transporter K09697 - 3.6.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001383 284.0
BYD3_k127_29432_2 permease K09696 - - 0.0000000000000000000000000000000009417 139.0
BYD3_k127_2953828_0 MaoC like domain K02618 - 1.2.1.91,3.3.2.12 3.497e-278 871.0
BYD3_k127_2953828_1 AMP-binding enzyme K01912 - 6.2.1.30 3.857e-200 631.0
BYD3_k127_2953828_2 TonB dependent receptor K02014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004557 305.0
BYD3_k127_2967114_0 Domain of unknown function (DUF5122) beta-propeller - - - 0.00000000000000000000000000000000000000000000000000000002949 224.0
BYD3_k127_2967114_1 - - - - 0.000000000000000000000000000000000000003845 152.0
BYD3_k127_2968343_0 histidine kinase A domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001887 467.0
BYD3_k127_2968343_1 Peptidase family M28 K19702 - 3.4.11.24 0.000000000000000001779 87.0
BYD3_k127_2969027_0 Glycosyltransferase Family 4 - - - 1.282e-240 754.0
BYD3_k127_2969027_1 Belongs to the sodium neurotransmitter symporter (SNF) (TC 2.A.22) family K03308 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005553 439.0
BYD3_k127_2969027_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000001092 230.0
BYD3_k127_2969027_3 PFAM RNA recognition motif - - - 0.0000000000000000000000004176 117.0
BYD3_k127_2969027_4 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000002434 109.0
BYD3_k127_2969748_0 Belongs to the glycosyl hydrolase 13 family K01200,K01214 - 3.2.1.41,3.2.1.68 1.541e-232 742.0
BYD3_k127_2969748_1 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000206 394.0
BYD3_k127_2969748_2 4-alpha-glucanotransferase K00705,K06044 - 2.4.1.25,5.4.99.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009959 343.0
BYD3_k127_2974250_0 COG1629 Outer membrane receptor proteins, mostly Fe transport - - - 9e-322 1018.0
BYD3_k127_2974250_1 TonB-dependent Receptor Plug K16092 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003833 361.0
BYD3_k127_2974250_2 helix_turn_helix, arabinose operon control protein K07506 - - 0.000000000000000000000000000000002866 142.0
BYD3_k127_2974250_3 Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate K02233 - 2.7.8.26 0.00000000000000000000000007768 112.0
BYD3_k127_2974756_0 Bacterial protein of unknown function (Gcw_chp) - - - 0.000000000000000000000000000000000000004274 155.0
BYD3_k127_2974756_1 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00822 - 2.6.1.18 0.000000000000000000000000000000000001988 139.0
BYD3_k127_2974756_2 Protein of unknown function (DUF861) K06995 - - 0.00000000000000000000000000003432 118.0
BYD3_k127_2981619_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00281,K00283 - 1.4.4.2 3.834e-244 765.0
BYD3_k127_2981619_1 Pro-apoptotic serine protease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000126 614.0
BYD3_k127_2981619_2 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00282 - 1.4.4.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001693 289.0
BYD3_k127_2981619_3 Recycling of diacylglycerol produced during the turnover of membrane phospholipid K00901 - 2.7.1.107 0.00000000000000000000000000000000137 133.0
BYD3_k127_2985514_0 GTP cyclohydrolase K01495 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003933,GO:0003934,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006066,GO:0006725,GO:0006729,GO:0006732,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009108,GO:0009987,GO:0016787,GO:0016810,GO:0016814,GO:0017076,GO:0017144,GO:0018130,GO:0019001,GO:0019238,GO:0019438,GO:0019751,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034311,GO:0034312,GO:0034641,GO:0035639,GO:0036094,GO:0042558,GO:0042559,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046146,GO:0046165,GO:0046173,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 3.5.4.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001259 319.0
BYD3_k127_2985514_1 Peptidase family M48 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003291 304.0
BYD3_k127_2985514_2 Histidine kinase K02484,K07640,K07642 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000004211 241.0
BYD3_k127_2985514_3 transcriptional regulator K07662 - - 0.0000000000000000000000000000000000000000000000000000000000000001353 229.0
BYD3_k127_2985514_4 Polyketide cyclase / dehydrase and lipid transport - - - 0.0000000000000000000000000000000000001627 149.0
BYD3_k127_2985514_5 Ca2 -binding protein (EF-Hand superfamily - - - 0.0001872 48.0
BYD3_k127_2987022_0 Protein tyrosine kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008683 458.0
BYD3_k127_2987022_1 Ferritin-like K20087 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001175 372.0
BYD3_k127_2988914_0 beta-1,4-mannooligosaccharide phosphorylase - - - 1.861e-214 674.0
BYD3_k127_2988914_1 Glycosyltransferase Family 4 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001469 433.0
BYD3_k127_2988914_2 helix_turn_helix, arabinose operon control protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007728 396.0
BYD3_k127_3006825_0 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003301 561.0
BYD3_k127_3006825_1 Type I secretion target GGXGXDXXX repeat (2 copies) - - - 0.000000000000000000000000001389 122.0
BYD3_k127_3011748_0 Maltogenic Amylase, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002565 329.0
BYD3_k127_3011748_1 receptor K02014 - - 0.00000000000000000000000000000000000000000000000000000001143 203.0
BYD3_k127_3011748_2 alpha-glucosidase K01187 - 3.2.1.20 0.0000000000000000000000000009097 116.0
BYD3_k127_3015701_0 AlkA N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001064 269.0
BYD3_k127_3015701_1 Protein of unknown function (DUF502) - - - 0.0000000000000000000000000000000000000000000000004067 182.0
BYD3_k127_3015701_2 Glycosyltransferase Family 4 K21011 - - 0.0000000000000000000000000000000000005364 154.0
BYD3_k127_3036992_0 receptor K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001472 252.0
BYD3_k127_3036992_1 FlhB HrpN YscU SpaS Family K04061 - - 0.00001857 47.0
BYD3_k127_3036992_2 chemotaxis, protein - - - 0.0008496 48.0
BYD3_k127_3037773_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 3.501e-236 742.0
BYD3_k127_3037773_1 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 GO:0000270,GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0006810,GO:0006869,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0010876,GO:0015647,GO:0015648,GO:0015835,GO:0015836,GO:0016020,GO:0016021,GO:0016043,GO:0022857,GO:0022884,GO:0030203,GO:0031224,GO:0031226,GO:0033036,GO:0034203,GO:0034204,GO:0034645,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0044425,GO:0044459,GO:0044464,GO:0046836,GO:0051179,GO:0051234,GO:0055085,GO:0061024,GO:0065007,GO:0065008,GO:0070589,GO:0071554,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071944,GO:0097035,GO:1901135,GO:1901137,GO:1901264,GO:1901505,GO:1901564,GO:1901566,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001027 461.0
BYD3_k127_3037773_2 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006996,GO:0007059,GO:0008150,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019003,GO:0022607,GO:0022611,GO:0022613,GO:0022618,GO:0032502,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034622,GO:0035639,GO:0036094,GO:0042254,GO:0042255,GO:0043021,GO:0043023,GO:0043167,GO:0043168,GO:0043933,GO:0044085,GO:0044087,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0065003,GO:0065007,GO:0070925,GO:0071826,GO:0071840,GO:0090069,GO:0090071,GO:0097159,GO:0097367,GO:1901265,GO:1901363 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002204 439.0
BYD3_k127_3037773_3 Belongs to the FPP GGPP synthase family K02523 - 2.5.1.90 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001596 395.0
BYD3_k127_3037773_4 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002464 303.0
BYD3_k127_3037773_5 This protein binds to 23S rRNA in the presence of protein L20 K02888 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000002971 149.0
BYD3_k127_3037773_6 - - - - 0.00000000000000000000000000000001443 134.0
BYD3_k127_3037773_7 Belongs to the bacterial ribosomal protein bL27 family K02899 GO:0000027,GO:0001558,GO:0003674,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040008,GO:0042254,GO:0042255,GO:0042256,GO:0042273,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0044877,GO:0048518,GO:0050789,GO:0050794,GO:0051128,GO:0065003,GO:0065007,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090069,GO:0090070,GO:1901564,GO:1901566,GO:1901576,GO:1902626,GO:1990904 - 0.0000000000000000000000000000002269 124.0
BYD3_k127_3037773_8 Binds directly to 16S ribosomal RNA K02968 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0004857,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008073,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030234,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0042979,GO:0043043,GO:0043086,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044092,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0050790,GO:0065003,GO:0065007,GO:0065009,GO:0070181,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:0098772,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000002581 96.0
BYD3_k127_3037773_9 - - - - 0.0007284 46.0
BYD3_k127_3041340_0 transporter K07552 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001374 303.0
BYD3_k127_3041340_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000017 281.0
BYD3_k127_3041340_2 peroxiredoxin, OsmC subfamily K04063 - - 0.0000000000000000000000000000000000000000000000002417 182.0
BYD3_k127_3041340_3 Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily K00121 - 1.1.1.1,1.1.1.284 0.0000000000000000000013 93.0
BYD3_k127_3041340_4 OsmC-like protein K07397 - - 0.0000000000003947 70.0
BYD3_k127_3043285_0 Transcriptional regulatory protein, C terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000483 328.0
BYD3_k127_3043285_1 Sugar (and other) transporter - - - 0.00000000000000000000000000000961 123.0
BYD3_k127_3043285_2 Membrane - - - 0.00000000000000000000001985 103.0
BYD3_k127_3047228_0 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K07711 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001159 327.0
BYD3_k127_3047228_1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K07715 GO:0000156,GO:0000160,GO:0000976,GO:0000984,GO:0001017,GO:0001067,GO:0001130,GO:0001150,GO:0001151,GO:0001158,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0006139,GO:0006351,GO:0006355,GO:0006725,GO:0006807,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0023052,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0035326,GO:0035556,GO:0043170,GO:0043565,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0045893,GO:0045935,GO:0046483,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0051716,GO:0060089,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902680,GO:1903506,GO:1903508,GO:1990837,GO:2000112,GO:2001141 - 0.00000000000000000000000000000002759 132.0
BYD3_k127_3079414_0 receptor K02014 - - 0.0 1074.0
BYD3_k127_3079414_1 UTRA K03710 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001067 362.0
BYD3_k127_3079414_2 Glycosyl hydrolase family 20, catalytic domain K12373 - 3.2.1.52 0.000001243 56.0
BYD3_k127_3080590_0 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03106 - 3.6.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003071 547.0
BYD3_k127_3080590_1 Belongs to the bacterial ribosomal protein bS16 family K02959 - - 0.0000005513 51.0
BYD3_k127_3086223_0 serine threonine protein kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001748 644.0
BYD3_k127_3086223_1 DNA-templated transcription, initiation K02405 - - 0.000000000000000000000000000000000000000000000000231 184.0
BYD3_k127_3086223_2 Parallel beta-helix repeats - - - 0.00005876 56.0
BYD3_k127_309173_0 COG1629 Outer membrane receptor proteins, mostly Fe transport - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007998 442.0
BYD3_k127_309173_1 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000001625 94.0
BYD3_k127_3092962_0 Sigma-54 interaction domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001306 312.0
BYD3_k127_3092962_1 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 GO:0000976,GO:0001067,GO:0001130,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006282,GO:0006351,GO:0006355,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009432,GO:0009605,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0009991,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031668,GO:0032774,GO:0032991,GO:0032993,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0042802,GO:0043170,GO:0043565,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0045892,GO:0045934,GO:0046483,GO:0048519,GO:0048523,GO:0048583,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051716,GO:0060255,GO:0065007,GO:0071496,GO:0071704,GO:0080090,GO:0080134,GO:0080135,GO:0090304,GO:0097159,GO:0097659,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2001020,GO:2001141 3.4.21.88 0.00000000000000000000000000000000000000000000000000000000000000000005666 237.0
BYD3_k127_3092962_2 Component of the SOS system and an inhibitor of cell division. Accumulation of SulA causes rapid cessation of cell division and the appearance of long, non-septate filaments. In the presence of GTP, binds a polymerization-competent form of FtsZ in a 1 1 ratio, thus inhibiting FtsZ polymerization and therefore preventing it from participating in the assembly of the Z ring. This mechanism prevents the premature segregation of damaged DNA to daughter cells during cell division K13053 - - 0.000000000000000000000000000000000000000000000397 173.0
BYD3_k127_3092962_3 Nucleotidyltransferase DNA polymerase involved in DNA repair K14161 - - 0.00000000000000000000002872 109.0
BYD3_k127_3095168_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001157 265.0
BYD3_k127_3095168_1 Transcriptional regulator K07978 - - 0.00000000000000000000000000000000000000000004059 165.0
BYD3_k127_3095168_2 amine dehydrogenase activity - - - 0.000000000000000000000000000000000000000007575 169.0
BYD3_k127_3095168_3 Domain of unknown function (DUF4156) - - - 0.0000000000000000000000000000001292 128.0
BYD3_k127_3095168_4 Heavy-metal-associated domain - - - 0.0000000000000000000000000137 112.0
BYD3_k127_3095168_5 - - - - 0.00000000000000000000000006874 116.0
BYD3_k127_3095168_6 Tetratricopeptide repeat - - - 0.0000000000000000000000002556 119.0
BYD3_k127_3095168_7 Isoprenylcysteine carboxyl methyltransferase (ICMT) family - - - 0.0000000000000000000001796 102.0
BYD3_k127_3112513_0 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.000000000000000000000000000000000000000000000000000000000001557 211.0
BYD3_k127_3112513_1 Plays a role in the regulation of phosphate uptake K02039 - - 0.00000000000000000000000000000000000000000002093 172.0
BYD3_k127_3112513_2 transcriptional regulators - - - 0.0000000000000000000000000002122 121.0
BYD3_k127_3114228_0 topoisomerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009756 398.0
BYD3_k127_3114228_1 methyltransferase - - - 0.00000000000000000000000000000000000000000000000003317 188.0
BYD3_k127_3114228_2 Peptidase, S9A B C family, catalytic domain protein - - - 0.000000000000000000000000000007551 122.0
BYD3_k127_3119375_0 Belongs to the IlvD Edd family K01690 - 4.2.1.12 1.497e-227 714.0
BYD3_k127_3119375_1 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008872 609.0
BYD3_k127_3119375_2 6-phosphogluconolactonase K01057 - 3.1.1.31 0.000001508 59.0
BYD3_k127_3121293_0 helix_turn_helix isocitrate lyase regulation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001079 323.0
BYD3_k127_3121293_1 PFAM AMP-dependent synthetase and ligase K00666 - - 0.00000000000000000000000000000000000006421 143.0
BYD3_k127_3121293_2 TIGRFAM Undecaprenyl-phosphate glucose phosphotransferase, exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase K03606 - - 0.00006845 52.0
BYD3_k127_3157085_0 Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell K00982 - 2.7.7.42,2.7.7.89 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001701 310.0
BYD3_k127_3157085_1 Putative FMN-binding domain K07734 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003201 272.0
BYD3_k127_3157085_2 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.000000000000000000000000000000000000000008732 158.0
BYD3_k127_3157085_3 PFAM Rhodanese domain protein - - - 0.0000000000000000000000000003005 114.0
BYD3_k127_3157085_4 Zinc-finger domain - - - 0.0000000000000000008187 99.0
BYD3_k127_3163922_0 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004503 378.0
BYD3_k127_3163922_1 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714,K21062,K22397 - 3.5.4.22,4.1.2.28,4.3.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005603 364.0
BYD3_k127_3171559_0 MotA/TolQ/ExbB proton channel family - - - 0.00000000000000000000000000000000000000000000000000008547 191.0
BYD3_k127_3171559_1 von Willebrand factor (VWF) type A domain - - - 0.0000000000000000000000000000000000000000000000000001146 194.0
BYD3_k127_3171559_2 - - - - 0.00000000000000000000000000003198 132.0
BYD3_k127_3190209_0 Protein of unknown function (DUF2834) - - - 0.00000000000000000000000000000000000000000000146 168.0
BYD3_k127_3190209_1 Family of unknown function (DUF5329) - - - 0.00000000000000000000000000000002582 129.0
BYD3_k127_3190209_2 Domain of unknown function (DUF4440) - - - 0.0000000007819 62.0
BYD3_k127_3246449_0 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005374 389.0
BYD3_k127_3246449_1 Carboxylesterase K06999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001606 288.0
BYD3_k127_3246449_2 Histidine kinase - - - 0.00000000000000000000000000001129 122.0
BYD3_k127_3246449_3 Protein of unknown function (DUF3096) - - - 0.0000000005923 67.0
BYD3_k127_3251368_0 Catalyzes the sodium-dependent transport of glutamate K03312 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008173 552.0
BYD3_k127_3251368_1 TRAP transporter solute receptor, TAXI family K07080 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008881 428.0
BYD3_k127_3253514_0 FAD binding domain K09828 - 1.3.1.72 1.288e-280 884.0
BYD3_k127_3253514_1 AAA domain, putative AbiEii toxin, Type IV TA system - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001775 539.0
BYD3_k127_3253514_10 metal-binding protein - - - 0.00000000000000000000000000000000000000000000000000000002143 201.0
BYD3_k127_3253514_11 Cytochrome c K08738 - - 0.000000000000000000000000000000000000000000002067 171.0
BYD3_k127_3253514_12 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000001135 169.0
BYD3_k127_3253514_13 Protein of unknown function (DUF3750) - - - 0.0000000000000000000000002578 115.0
BYD3_k127_3253514_14 Major Facilitator Superfamily - - - 0.000000000000000000000001423 108.0
BYD3_k127_3253514_2 Mo-co oxidoreductase dimerisation domain K17225 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003124 508.0
BYD3_k127_3253514_3 Beta-lactamase superfamily domain K00784 - 3.1.26.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006168 387.0
BYD3_k127_3253514_4 Evidence 4 Homologs of previously reported genes of - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003056 385.0
BYD3_k127_3253514_5 methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006684 352.0
BYD3_k127_3253514_6 Glutathione S-transferase K00799 - 2.5.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003769 344.0
BYD3_k127_3253514_7 Metallo-beta-lactamase superfamily K17837 - 3.5.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001125 292.0
BYD3_k127_3253514_8 Glyoxalase-like domain K07032 - - 0.00000000000000000000000000000000000000000000000000000000000005254 217.0
BYD3_k127_3253514_9 Acetyltransferase (GNAT) domain K03829 - - 0.000000000000000000000000000000000000000000000000000000005886 202.0
BYD3_k127_3255823_0 Protein of unknown function (DUF1595) - - - 2.27e-217 689.0
BYD3_k127_3255971_0 Transferase K02527 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016020,GO:0016051,GO:0016740,GO:0019637,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044464,GO:0046467,GO:0046493,GO:0071704,GO:0071944,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001007 380.0
BYD3_k127_3255971_1 Di-haem oxidoreductase, putative peroxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001354 362.0
BYD3_k127_3255971_2 peptidase K07386 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002514 310.0
BYD3_k127_3255971_3 Lipid A biosynthesis K02517 - 2.3.1.241 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005705 285.0
BYD3_k127_3255971_4 Lipid A biosynthesis K02517 - 2.3.1.241 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006128 283.0
BYD3_k127_3255971_5 Glycosyltransferase family 9 (heptosyltransferase) K02849 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007562 267.0
BYD3_k127_3255971_6 Catalyzes the ATP-dependent phosphorylation of the 3- deoxy-D-manno-octulosonic acid (Kdo) residue in Kdo-lipid IV(A) at the 4-OH position K11211 - 2.7.1.166 0.000000000000000000000000000000000000000000000000000001005 202.0
BYD3_k127_3255971_7 response to abiotic stimulus - - - 0.0000000000000006927 87.0
BYD3_k127_3261576_0 Belongs to the glycosyl hydrolase 13 family K01214 - 3.2.1.68 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000158 601.0
BYD3_k127_3261576_1 Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs) K03670 GO:0000271,GO:0005575,GO:0005623,GO:0005975,GO:0005976,GO:0006073,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009250,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0030288,GO:0030313,GO:0031975,GO:0033692,GO:0034637,GO:0034645,GO:0042597,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044464,GO:0051273,GO:0051274,GO:0071704,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009252 426.0
BYD3_k127_3261576_2 mannose-1-phosphate guanylyltransferase activity K00971,K16011 - 2.7.7.13,5.3.1.8 0.000000000000000000000000000000000000000006188 168.0
BYD3_k127_3261811_0 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007739 380.0
BYD3_k127_3261811_1 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K05807 - - 0.00000000000000000000000000000000000000000000000000000000000000000000049 246.0
BYD3_k127_3262438_0 COG1960 Acyl-CoA dehydrogenases K20035 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007456 431.0
BYD3_k127_3262438_1 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid K17837 - 3.5.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003984 321.0
BYD3_k127_3262438_2 FG-GAP repeat - - - 0.00000000000000001203 90.0
BYD3_k127_3262438_4 - - - - 0.0006717 49.0
BYD3_k127_3265701_0 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 GO:0001522,GO:0003674,GO:0003824,GO:0004123,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006790,GO:0006807,GO:0008033,GO:0008144,GO:0008150,GO:0008152,GO:0008483,GO:0009000,GO:0009058,GO:0009451,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016226,GO:0016740,GO:0016769,GO:0016782,GO:0016783,GO:0016829,GO:0016846,GO:0018130,GO:0018131,GO:0019842,GO:0022607,GO:0030170,GO:0031071,GO:0031119,GO:0031163,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046484,GO:0048037,GO:0050662,GO:0051186,GO:0070279,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0097163,GO:0140104,GO:1901360,GO:1901363 2.8.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001479 468.0
BYD3_k127_3265701_1 Is able to transfer iron-sulfur clusters to apo- ferredoxin. Multiple cycles of 2Fe2S cluster formation and transfer are observed, suggesting that IscA acts catalytically. Recruits intracellular free iron so as to provide iron for the assembly of transient iron-sulfur cluster in IscU in the presence of IscS, L-cysteine and the thioredoxin reductase system K05997,K13628 GO:0003674,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008198,GO:0009987,GO:0010467,GO:0016043,GO:0016226,GO:0016530,GO:0019538,GO:0022607,GO:0031163,GO:0034986,GO:0043167,GO:0043169,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0048037,GO:0051186,GO:0051536,GO:0051537,GO:0051540,GO:0051604,GO:0071704,GO:0071840,GO:0097428,GO:0140104,GO:1901564 - 0.000000000000000000000000000000000000000005834 156.0
BYD3_k127_3265701_2 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 - 2.7.4.6 0.0000000000000000000000000000000000001369 142.0
BYD3_k127_3265701_3 FeS cluster assembly scaffold protein NifU K04488 - - 0.00000000002262 70.0
BYD3_k127_3270813_0 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 GO:0000270,GO:0003674,GO:0003824,GO:0005575,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008963,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016020,GO:0016740,GO:0016772,GO:0016780,GO:0030203,GO:0034645,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 2.7.8.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008507 496.0
BYD3_k127_3270813_1 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.0000000000000000000000000000000000000000000000000000000001257 208.0
BYD3_k127_3276627_0 serine protease - - - 0.00000000000000000000000000000000000000000005717 175.0
BYD3_k127_3277002_0 Acyl-CoA dehydrogenase K00252 - 1.3.8.6 1.469e-194 619.0
BYD3_k127_3277002_1 Transcriptional regulatory protein, C terminal K02483,K07663 GO:0000976,GO:0000984,GO:0000986,GO:0000987,GO:0001017,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0005488,GO:0005515,GO:0006355,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0019219,GO:0019222,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0042802,GO:0043565,GO:0044212,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1902680,GO:1903506,GO:1903508,GO:1990837,GO:2000112,GO:2001141 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001177 308.0
BYD3_k127_3277002_2 Protein of unknown function (DUF962) - - - 0.0000000000000000000000000000000000000002878 164.0
BYD3_k127_3281701_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 GO:0003674,GO:0003824,GO:0004812,GO:0004829,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006435,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.3 2.586e-195 616.0
BYD3_k127_3281701_1 COG1529 Aerobic-type carbon monoxide dehydrogenase large subunit CoxL CutL homologs K07303 - 1.3.99.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006889 444.0
BYD3_k127_3281701_2 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 0.00000000000000000000000001144 111.0
BYD3_k127_3281701_3 Response regulator of the LytR AlgR family K02477 - - 0.000003258 58.0
BYD3_k127_3286248_0 PAS domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007756 373.0
BYD3_k127_3286248_1 SPFH Band 7 PHB domain protein K07192 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000453 334.0
BYD3_k127_3286248_2 AhpC/TSA family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002504 297.0
BYD3_k127_3296287_0 PFAM GMC oxidoreductase - - - 9.755e-289 896.0
BYD3_k127_3296287_1 Domain of Unknown Function (DUF1080) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002086 261.0
BYD3_k127_3296287_2 Gluconate 2-dehydrogenase subunit 3 - - - 0.000000000000000000000000000000000000000000000000000000002176 205.0
BYD3_k127_3297622_0 TonB-dependent receptor plug - - - 2.242e-303 949.0
BYD3_k127_3297622_1 Iron-binding zinc finger CDGSH type - - - 0.00000000000000000000000000000000000000000000000000000000002013 207.0
BYD3_k127_3297622_2 helix_turn_helix multiple antibiotic resistance protein - - - 0.0000000000000000000000000000000000000005453 154.0
BYD3_k127_3298935_0 Protein tyrosine kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005435 355.0
BYD3_k127_3298935_1 ECF sigma factor - - - 0.00000000000000000000000000000000000000000000009584 174.0
BYD3_k127_3298935_2 diguanylate cyclase K21022 - 2.7.7.65 0.0000000000000000000000000000001683 143.0
BYD3_k127_3302827_0 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001496 536.0
BYD3_k127_3302827_1 CBS domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001556 256.0
BYD3_k127_3302827_2 Cytochrome c assembly protein - - - 0.000000000000000000000000000000000000000000000000008911 188.0
BYD3_k127_3303633_0 KDPG and KHG aldolase K01625 - 4.1.2.14,4.1.3.42 0.00000000000000000000000000000000000000000000000000000000000000000000002164 247.0
BYD3_k127_3303633_1 Belongs to the IlvD Edd family K01690 - 4.2.1.12 0.00000009516 54.0
BYD3_k127_3312052_0 Spermine/spermidine synthase domain K00797 - 2.5.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000717 305.0
BYD3_k127_3312052_1 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.00000000000000000000000000000000000000000000000000000000000001101 221.0
BYD3_k127_3312052_2 chromosome segregation K03497 - - 0.000000000000000000000000002545 117.0
BYD3_k127_3312052_3 Bacterial protein of unknown function (DUF883) - - - 0.00000000002257 68.0
BYD3_k127_3312052_4 ETC complex I subunit conserved region - - - 0.0000003761 55.0
BYD3_k127_3314764_0 Metal dependent phosphohydrolases with conserved 'HD' motif. K01129 GO:0003674,GO:0003824,GO:0006139,GO:0006163,GO:0006195,GO:0006203,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008832,GO:0009056,GO:0009058,GO:0009117,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009151,GO:0009155,GO:0009166,GO:0009200,GO:0009204,GO:0009215,GO:0009217,GO:0009262,GO:0009264,GO:0009394,GO:0009987,GO:0015949,GO:0016787,GO:0016788,GO:0016793,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042578,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046070,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576 3.1.5.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005303 508.0
BYD3_k127_3314764_1 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735 - 4.2.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002185 446.0
BYD3_k127_3314764_2 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 - 4.1.1.37 0.00000000000000000000000000000000000000000000000000000000000001186 218.0
BYD3_k127_3314764_3 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 - 2.7.1.71 0.00000000000000000000000000000000000000000000000002715 185.0
BYD3_k127_3314764_4 type IV pilus secretin PilQ K02666 - - 0.00000000000000000000000000000002042 128.0
BYD3_k127_3317245_0 AAA-like domain - - - 9.419e-269 849.0
BYD3_k127_3317245_1 taurine dioxygenase K03119 - 1.14.11.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004781 447.0
BYD3_k127_3317245_2 GlcNAc-PI de-N-acetylase - - - 0.0000000000000000000000000000000000001053 155.0
BYD3_k127_3318722_0 Uncharacterized alpha/beta hydrolase domain (DUF2235) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006425 377.0
BYD3_k127_3318722_1 UvrD/REP helicase N-terminal domain K03657 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000003441 242.0
BYD3_k127_3318722_2 SnoaL-like domain K06893 - - 0.00000000000000000000000000000000000000000000002764 173.0
BYD3_k127_3318722_3 Endoribonuclease L-PSP - - - 0.000000000000000000000000000000000000000001591 161.0
BYD3_k127_3318722_4 helix_turn_helix, arabinose operon control protein - - - 0.0000000000000000000000000000000001193 144.0
BYD3_k127_3318722_5 Uncharacterized ACR, COG1430 K09005 - - 0.0000000000000003489 85.0
BYD3_k127_3318722_6 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K01759 - 4.4.1.5 0.0000000000006763 77.0
BYD3_k127_3318722_7 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00005286 53.0
BYD3_k127_3323513_0 PFAM Orn DAP Arg decarboxylase 2 K01586 - 4.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000342 510.0
BYD3_k127_3323513_1 Asp/Glu/Hydantoin racemase K01779 - 5.1.1.13 0.000000000000000000000000000000000000000005737 164.0
BYD3_k127_332407_0 LysR substrate binding domain K03566 - - 0.0000000000000000000000000000000000000000000000000000000000002503 222.0
BYD3_k127_332407_1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000000000000000000000000131 147.0
BYD3_k127_332407_2 - - - - 0.00000000000000000000004363 108.0
BYD3_k127_3328879_0 Belongs to the folylpolyglutamate synthase family K11754 - 6.3.2.12,6.3.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000009826 267.0
BYD3_k127_3328879_1 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 GO:0003674,GO:0003824,GO:0004044,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006163,GO:0006164,GO:0006520,GO:0006541,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009064,GO:0009117,GO:0009165,GO:0009987,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019637,GO:0019752,GO:0034641,GO:0034654,GO:0042802,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.4.2.14 0.000000000000000000000000000000000000000000003174 171.0
BYD3_k127_3328879_2 Colicin V production protein K03558 GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0008152,GO:0009058,GO:0009403,GO:0009404,GO:0009987,GO:0016020,GO:0019748,GO:0044237,GO:0044249,GO:0044464,GO:0044550,GO:0071944 - 0.00000000000000000000764 99.0
BYD3_k127_3328879_3 Sporulation related domain K03749 - - 0.000000000000000006583 92.0
BYD3_k127_3333780_0 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 - 2.5.1.54 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008412 600.0
BYD3_k127_3333780_1 Belongs to the IlvD Edd family K01687 - 4.2.1.9 0.00000000000000000000000000000000000000000000000000000000000009401 217.0
BYD3_k127_3333780_2 Saccharopine dehydrogenase C-terminal domain - - - 0.00000000000004151 75.0
BYD3_k127_3334423_0 Hydrolase K20881 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008252,GO:0008253,GO:0008477,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0016798,GO:0016799,GO:0030145,GO:0042578,GO:0043167,GO:0043169,GO:0044237,GO:0046872,GO:0046914,GO:0050483,GO:0050484 3.1.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000001925 256.0
BYD3_k127_3334423_1 DEAD-box RNA helicase involved in RNA degradation. Has RNA-dependent ATPase activity and unwinds double-stranded RNA K03732 GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006807,GO:0008026,GO:0008150,GO:0008152,GO:0008186,GO:0009987,GO:0010501,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070035,GO:0071704,GO:0090304,GO:0140098,GO:1901360 3.6.4.13 0.00000000000000000000000000000000000000003174 158.0
BYD3_k127_3334423_2 Protein of unknown function (DUF3301) - - - 0.00000000000000006056 88.0
BYD3_k127_3335097_0 Oxidoreductase FAD-binding domain K00523 - 1.17.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001635 358.0
BYD3_k127_3335097_1 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 GO:0003674,GO:0003824,GO:0004418,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001927 338.0
BYD3_k127_3335097_10 Bacterial protein of unknown function (DUF883) - - - 0.000000000000000000000002387 105.0
BYD3_k127_3335097_11 enzyme of heme biosynthesis K02496,K13543 - 2.1.1.107,4.2.1.75 0.0000000000000000004501 100.0
BYD3_k127_3335097_12 Putative Actinobacterial Holin-X, holin superfamily III - - - 0.0000000000000000009686 93.0
BYD3_k127_3335097_2 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002057 327.0
BYD3_k127_3335097_3 permease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007633 286.0
BYD3_k127_3335097_4 NAD(P)H-binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002 252.0
BYD3_k127_3335097_5 AAA domain K03496 - - 0.000000000000000000000000000000000000000000000000000000000000003791 224.0
BYD3_k127_3335097_6 Bacterial regulatory protein, arsR family - - - 0.000000000000000000000000000000000000000000000000000000000000009014 220.0
BYD3_k127_3335097_7 enzyme of heme biosynthesis K02498 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000009801 199.0
BYD3_k127_3335097_8 Uroporphyrinogen III synthase K01719 - 4.2.1.75 0.00000000000000000000000000000000000001589 160.0
BYD3_k127_3335097_9 Protein of unknown function, DUF484 K09921 - - 0.000000000000000000000001884 109.0
BYD3_k127_333838_0 - - - - 0.0000000000000000000000000000000000000000000001745 183.0
BYD3_k127_333838_1 Transcriptional regulatory protein, C terminal - - - 0.0000000000000000000000000000000000002834 143.0
BYD3_k127_333988_0 TIGRFAM glutamine amidotransferase of anthranilate synthase K01658,K01664 - 2.6.1.85,4.1.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000005529 250.0
BYD3_k127_333988_1 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766,K13497 - 2.4.2.18,4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000002132 257.0
BYD3_k127_333988_2 Indole-3-glycerol phosphate synthase K01609 GO:0000162,GO:0000287,GO:0003674,GO:0003824,GO:0004425,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016020,GO:0016053,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019752,GO:0030312,GO:0034641,GO:0040007,GO:0042401,GO:0042430,GO:0042435,GO:0043167,GO:0043169,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044464,GO:0046219,GO:0046391,GO:0046394,GO:0046483,GO:0046872,GO:0071704,GO:0071944,GO:1901135,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.1.1.48 0.00000000000000000000000000000000000000001827 165.0
BYD3_k127_33455_0 Signal transduction histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003196 400.0
BYD3_k127_33455_1 response regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002755 250.0
BYD3_k127_33455_2 Protein conserved in bacteria K13735 - - 0.0000000000000000000000000000000000000000000000008027 200.0
BYD3_k127_33455_3 cheY-homologous receiver domain - - - 0.0000000000000000000007207 102.0
BYD3_k127_3346854_0 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005407 459.0
BYD3_k127_3346854_1 Exodeoxyribonuclease III K01142 - 3.1.11.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001051 409.0
BYD3_k127_3346854_2 nitrite transmembrane transporter activity K08218,K08223 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001857 339.0
BYD3_k127_3346854_3 Belongs to the UPF0758 family K03630 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005198 289.0
BYD3_k127_3346854_4 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000009715 282.0
BYD3_k127_3346854_5 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA K01520 GO:0000166,GO:0000287,GO:0001882,GO:0001884,GO:0002134,GO:0003674,GO:0003824,GO:0004170,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006220,GO:0006221,GO:0006226,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009141,GO:0009143,GO:0009147,GO:0009149,GO:0009157,GO:0009162,GO:0009165,GO:0009166,GO:0009176,GO:0009177,GO:0009200,GO:0009204,GO:0009211,GO:0009213,GO:0009219,GO:0009221,GO:0009223,GO:0009262,GO:0009263,GO:0009264,GO:0009265,GO:0009394,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019103,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0022607,GO:0032549,GO:0032551,GO:0032553,GO:0032557,GO:0032991,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046078,GO:0046080,GO:0046081,GO:0046385,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0046872,GO:0047429,GO:0051259,GO:0051260,GO:0055086,GO:0065003,GO:0070206,GO:0070207,GO:0071704,GO:0071840,GO:0072527,GO:0072528,GO:0072529,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901136,GO:1901137,GO:1901265,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 3.6.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000006834 248.0
BYD3_k127_3346854_6 Belongs to the bacterial ribosomal protein bL28 family K02902 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000007303 68.0
BYD3_k127_3346854_7 Domain of unknown function (DUF4124) - - - 0.00000008725 61.0
BYD3_k127_3346854_8 - - - - 0.000001553 52.0
BYD3_k127_3363735_0 E COG0620 Methionine synthase II (cobalamin-independent) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001281 397.0
BYD3_k127_3363735_1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005303 254.0
BYD3_k127_3364221_0 Fibronectin type III-like domain K05349 - 3.2.1.21 3.344e-290 914.0
BYD3_k127_3364221_1 receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002123 331.0
BYD3_k127_3365284_0 Protein tyrosine kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008946 363.0
BYD3_k127_3365284_1 type II secretion system protein K12511 - - 0.00000000000000000000000000000000000000000000000001592 191.0
BYD3_k127_3365284_2 Type II secretion system K12510 - - 0.0000000000000000000000000000000000000000000001803 176.0
BYD3_k127_3365284_3 ECF sigma factor - - - 0.0000000000000000000000000000000000000000007908 163.0
BYD3_k127_3365284_4 PFAM TadE family protein - - - 0.0000000000000000000000000000000000006534 157.0
BYD3_k127_3365284_5 helix_turn_helix, arabinose operon control protein K07506 - - 0.00000000000000000000000000000009732 136.0
BYD3_k127_3365284_6 Uncharacterized ACR, COG1430 K09005 - - 0.000000000000000000002606 98.0
BYD3_k127_3365284_7 oxidation-reduction process K09022 - 3.5.99.10 0.000000000000000001296 97.0
BYD3_k127_3365284_8 peptidyl-tyrosine sulfation - - - 0.000000000005162 76.0
BYD3_k127_3367020_0 Tryptophan halogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002321 513.0
BYD3_k127_3367020_1 Phosphotransferase - - - 0.000000000000000000000000000000000000000003605 160.0
BYD3_k127_3377060_0 Belongs to the glycosyl hydrolase 31 family K07407 - 3.2.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001976 437.0
BYD3_k127_3377060_1 FAD dependent oxidoreductase K00285,K21060 - 1.4.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000229 341.0
BYD3_k127_3377060_2 FCD - - - 0.000000000000000000000000000000000000000000000013 179.0
BYD3_k127_3384672_0 Belongs to the citrate synthase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002655 301.0
BYD3_k127_3384672_1 Putative tRNA binding domain - - - 0.000000000000000000000000000000000000000000001321 167.0
BYD3_k127_3384672_2 Acyl-CoA thioesterase - - - 0.00000002713 57.0
BYD3_k127_3384672_3 COG0583 Transcriptional regulator K21699 - - 0.00000003128 55.0
BYD3_k127_3386755_0 Serine aminopeptidase, S33 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002781 272.0
BYD3_k127_3386755_1 amidohydrolase - - - 0.00000000000000000000000000000000000000000000000000001107 209.0
BYD3_k127_3386755_2 Cytochrome c mono- and diheme variants - - - 0.00000000000000000000000000000000000000000000001577 176.0
BYD3_k127_3386755_3 Polyketide cyclase / dehydrase and lipid transport - - - 0.00000000000000000000000000000000000000001586 156.0
BYD3_k127_3386755_4 helix_turn_helix, arabinose operon control protein - - - 0.000000000000000000000000003952 122.0
BYD3_k127_3386755_5 Beta-lactamase superfamily domain - - - 0.00000000000000000000000006876 108.0
BYD3_k127_3386755_7 serine threonine protein kinase K12132 - 2.7.11.1 0.0006045 51.0
BYD3_k127_3389181_0 HpcH/HpaI aldolase/citrate lyase family K01644 - 4.1.3.34 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002434 327.0
BYD3_k127_3389181_1 SMART Integrin alpha beta-propellor repeat protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002947 266.0
BYD3_k127_3389181_2 FG-GAP repeat - - - 0.000000000000000000000000000000000000000000000003563 192.0
BYD3_k127_3389181_3 Glucose Sorbosone dehydrogenase - - - 0.000000001281 71.0
BYD3_k127_3393696_0 histidine kinase HAMP region domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001099 333.0
BYD3_k127_3393696_1 ABC transporter K02047 - - 0.00000000000000000000000000000000000000004784 152.0
BYD3_k127_3402396_0 Pyridine nucleotide-disulphide oxidoreductase, dimerisation K00382 GO:0003674,GO:0003824,GO:0004148,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005759,GO:0006082,GO:0006084,GO:0006085,GO:0006086,GO:0006090,GO:0006139,GO:0006163,GO:0006164,GO:0006464,GO:0006637,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0018130,GO:0018335,GO:0019362,GO:0019438,GO:0019538,GO:0019637,GO:0019693,GO:0019752,GO:0031974,GO:0031981,GO:0032787,GO:0032991,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0035383,GO:0035384,GO:0036211,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043436,GO:0043543,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044272,GO:0044281,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045239,GO:0045240,GO:0045252,GO:0045254,GO:0046390,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0061732,GO:0070013,GO:0071616,GO:0071704,GO:0072521,GO:0072522,GO:0072524,GO:0090407,GO:0106077,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902494,GO:1990204,GO:1990234 1.8.1.4 8.839e-223 705.0
BYD3_k127_3407398_0 COG4775 Outer membrane protein protective antigen OMA87 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000319 320.0
BYD3_k127_3407398_1 DNA-templated transcription, initiation K03088,K03091 - - 0.0000000000000000000000000007508 120.0
BYD3_k127_3411101_0 Cytochrome c554 and c-prime - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001478 349.0
BYD3_k127_3411101_1 LVIVD repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004654 336.0
BYD3_k127_3417380_0 Amidase K01426,K21801 - 3.5.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009197 397.0
BYD3_k127_3417380_1 Peptidase family M28 K06016 - 3.5.1.6,3.5.1.87 0.000000000000000000000001184 103.0
BYD3_k127_3417517_0 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 3.773e-219 689.0
BYD3_k127_3417517_1 TIGRFAM Cell shape determining protein MreB Mrl K03569 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001267 301.0
BYD3_k127_3417517_2 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 0.000000000000000000000000000000000000000000000000437 184.0
BYD3_k127_3417517_3 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.000000000000000000000000003871 114.0
BYD3_k127_3459505_0 Transcriptional regulatory protein, C terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001351 525.0
BYD3_k127_3459505_1 COG3000 Sterol desaturase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003954 350.0
BYD3_k127_3459505_2 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003845 248.0
BYD3_k127_3459505_3 domain, Protein - - - 0.000000000000000000000000000000000000001723 155.0
BYD3_k127_3459505_4 COG1506 Dipeptidyl aminopeptidases acylaminoacyl-peptidases - - - 0.000000005816 67.0
BYD3_k127_3461916_0 belongs to the aldehyde dehydrogenase family K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 3.375e-232 728.0
BYD3_k127_346511_0 DnaJ-class molecular chaperone K05516 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0097159,GO:1901363 - 0.0000000000000000000000000000000000000003164 151.0
BYD3_k127_346511_1 Reprolysin (M12B) family zinc metalloprotease - - - 0.000000000000000000000000000000000001918 158.0
BYD3_k127_3469381_0 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002929 502.0
BYD3_k127_3469381_1 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000257 393.0
BYD3_k127_3469381_2 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003288 267.0
BYD3_k127_3469381_3 Riboflavin synthase K00793 - 2.5.1.9 0.0000000000000000000000000000000000000000000000000000000000000000002 237.0
BYD3_k127_3469381_4 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 GO:0000166,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0005488,GO:0005524,GO:0006355,GO:0008144,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0017076,GO:0019219,GO:0019222,GO:0030554,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 - 0.0000000000000000000000000000000000000000000000000000000000000004771 224.0
BYD3_k127_3469381_5 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 GO:0000906,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.78 0.0000000000000000000000000000000000000000000000000000000598 202.0
BYD3_k127_3469381_6 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006353,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0018130,GO:0019438,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:1901360,GO:1901362,GO:1901576 - 0.000000000000003716 78.0
BYD3_k127_347838_0 Competence protein K02238 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001394 309.0
BYD3_k127_347838_1 protein conserved in bacteria K09928 - - 0.000000000000000000000000000003892 124.0
BYD3_k127_3487754_0 Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family K00111 - 1.1.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002015 596.0
BYD3_k127_3487754_1 [2Fe-2S] binding domain K07302 - 1.3.99.16 0.000000000000000000000000000000000000000000000000003504 184.0
BYD3_k127_3487754_2 Belongs to the HSP15 family K04762 - - 0.0000000000000000000000001877 122.0
BYD3_k127_348788_0 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001154 338.0
BYD3_k127_348788_1 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 - 6.3.4.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004146 327.0
BYD3_k127_348788_2 Regulates arginine biosynthesis genes K03402 - - 0.000000000000000000000005375 107.0
BYD3_k127_349001_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001168 556.0
BYD3_k127_349001_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004315 355.0
BYD3_k127_349001_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003625 272.0
BYD3_k127_349001_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000005594 227.0
BYD3_k127_349001_4 Glyoxalase-like domain - - - 0.000000000000000000000000000000002389 138.0
BYD3_k127_349789_0 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004737 321.0
BYD3_k127_349789_1 COG2816 NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding K03426 - 3.6.1.22 0.000009652 51.0
BYD3_k127_3504462_0 Major facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004104 450.0
BYD3_k127_3504462_1 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001965 324.0
BYD3_k127_3504462_2 PTS system, N-acetylglucosamine-specific K02803,K02804 - 2.7.1.193 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001067 303.0
BYD3_k127_3504462_3 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000503 248.0
BYD3_k127_3507725_0 TonB dependent receptor K02014 - - 5.351e-316 987.0
BYD3_k127_3507725_1 Beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004426 426.0
BYD3_k127_3507725_10 Domain of unknown function (DU1801) - - - 0.00000000000000000005697 91.0
BYD3_k127_3507725_2 PepSY-associated TM helix - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002847 364.0
BYD3_k127_3507725_3 Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide K08641 - 3.4.13.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004286 316.0
BYD3_k127_3507725_4 Polyketide cyclase / dehydrase and lipid transport - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000009847 295.0
BYD3_k127_3507725_5 Beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003247 288.0
BYD3_k127_3507725_6 Domain of unknown function (DU1801) - - - 0.000000000000000000000000000000000000000000000000000001001 205.0
BYD3_k127_3507725_7 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.000000000000000000000000000000000000000000000000001133 186.0
BYD3_k127_3507725_8 DoxX-like family - - - 0.000000000000000000000000000000000000000000000002551 185.0
BYD3_k127_3507725_9 RDD family - - - 0.000000000000000000001582 102.0
BYD3_k127_352412_0 Protein tyrosine kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008292 564.0
BYD3_k127_352412_1 Methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003533 304.0
BYD3_k127_352412_2 ECF sigma factor - - - 0.00000000000000000000000000000000000000000000000000000000455 205.0
BYD3_k127_352412_3 HEAT repeats - - - 0.00000000000000000000009496 108.0
BYD3_k127_352412_4 PBS lyase HEAT-like repeat - - - 0.0000000000000000003777 99.0
BYD3_k127_352412_5 Regulator of chromosome condensation (RCC1) repeat - - - 0.00000000000000003471 91.0
BYD3_k127_3526324_0 Belongs to the flagella basal body rod proteins family K02396 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000235 419.0
BYD3_k127_3527150_0 Aldo/keto reductase family K19265 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001277 482.0
BYD3_k127_3527150_1 Serine hydrolase involved in the detoxification of formaldehyde K01070 - 3.1.2.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001284 391.0
BYD3_k127_3527150_2 Tetratricopeptide repeats K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008356 343.0
BYD3_k127_3527150_3 Glutathione-dependent formaldehyde-activating enzyme K03396 - 4.4.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000113 304.0
BYD3_k127_3527150_4 PRC-barrel domain - - - 0.0000007889 50.0
BYD3_k127_3528614_0 Prolyl oligopeptidase, N-terminal beta-propeller domain K01354 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0016787,GO:0017171,GO:0019538,GO:0043170,GO:0044238,GO:0044424,GO:0044464,GO:0070011,GO:0070012,GO:0071704,GO:0140096,GO:1901564 3.4.21.83 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002714 427.0
BYD3_k127_3528614_1 Aldo/keto reductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005602 331.0
BYD3_k127_3528614_2 Response regulator, receiver - - - 0.00000000000000000000000000000000000002346 147.0
BYD3_k127_3528614_3 Histidine kinase K17763 - - 0.0000000000000000000001247 102.0
BYD3_k127_3550239_0 Sodium/hydrogen exchanger family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001318 383.0
BYD3_k127_3550239_1 H( )-stimulated, divalent metal cation uptake system - - - 0.0000000000000000000000000001135 120.0
BYD3_k127_3550239_2 BON domain - - - 0.000000000000000006565 88.0
BYD3_k127_355421_0 Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002688 304.0
BYD3_k127_355421_1 oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002275 302.0
BYD3_k127_355421_2 Acyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001689 270.0
BYD3_k127_355421_3 thioesterase K07107 - - 0.00000000000000000000000000000000000000006517 156.0
BYD3_k127_355421_5 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.000000000000000000006024 96.0
BYD3_k127_355421_6 Belongs to the P-Pant transferase superfamily K06133 - - 0.000000000197 69.0
BYD3_k127_355421_7 - - - - 0.00001089 53.0
BYD3_k127_355888_0 Aldehyde dehydrogenase family K00140 - 1.2.1.18,1.2.1.27 2.906e-225 710.0
BYD3_k127_355888_1 acid phosphatase K14379 - 3.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003309 295.0
BYD3_k127_355888_2 LysR substrate binding domain K03717 - - 0.00000000000000000000000000000000000000000000000185 179.0
BYD3_k127_355888_3 Universal stress protein family - - - 0.00000000000000000000000000004152 130.0
BYD3_k127_355888_4 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus K03624,K06140 - - 0.000000000000000000000001013 108.0
BYD3_k127_3576044_0 Cytochrome c - - - 6.711e-197 623.0
BYD3_k127_3576044_1 Peptidase M48 Ste24p - - - 0.00000000000000000000000000000000000000000000000006257 190.0
BYD3_k127_3576044_2 cyclic nucleotide binding K10914 - - 0.0000000000000000000000000000000001647 139.0
BYD3_k127_3578730_0 Protein involved in outer membrane biogenesis - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003342 338.0
BYD3_k127_3578730_1 PFAM HD domain - - - 0.00000000000000000000000000000000000000000000000000000000000000003727 250.0
BYD3_k127_358237_0 Pectinacetylesterase - - - 4.562e-210 666.0
BYD3_k127_358237_1 Di-haem cytochrome c peroxidase K00428 GO:0005575,GO:0005623,GO:0042597,GO:0044464 1.11.1.5 1.864e-195 623.0
BYD3_k127_358237_2 Gamma-glutamyl cyclotransferase, AIG2-like - - - 0.00000000000000000000000000000000000008726 144.0
BYD3_k127_358237_3 PFAM electron transport protein SCO1 SenC K07152 - - 0.00000000000000000000000000007355 124.0
BYD3_k127_358237_4 - - - - 0.000000000000000000000000009413 117.0
BYD3_k127_3585346_0 Cellulase (glycosyl hydrolase family 5) - - - 6.225e-241 763.0
BYD3_k127_3585346_1 MFS/sugar transport protein K03292 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001927 387.0
BYD3_k127_3585346_2 COG1629 Outer membrane receptor proteins, mostly Fe transport K02014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006424 395.0
BYD3_k127_3585346_3 aldo keto reductase - - - 0.000000000000000000000000000000000000000000000000000000003987 226.0
BYD3_k127_3585346_4 transcriptional - - - 0.000000000000000000000000000000003826 139.0
BYD3_k127_3585346_5 Membrane carboxypeptidase (penicillin-binding protein) - GO:0001666,GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0006950,GO:0008144,GO:0008150,GO:0008658,GO:0009628,GO:0009987,GO:0030288,GO:0030313,GO:0031406,GO:0031975,GO:0033218,GO:0033293,GO:0033554,GO:0036094,GO:0036293,GO:0036294,GO:0042221,GO:0042597,GO:0043167,GO:0043168,GO:0043177,GO:0044464,GO:0050896,GO:0051716,GO:0070482,GO:0070887,GO:0071453,GO:0071456,GO:0097159,GO:1901363,GO:1901681 - 0.0001485 52.0
BYD3_k127_3590875_0 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.00000000000000000000000000000000000000000000000000000000000000000000000006264 258.0
BYD3_k127_3590875_1 TIGRFAM Phage SPO1 DNA polymerase-related protein K21929 - 3.2.2.27 0.0000000000000000000000000000000000000000000000000000000000436 214.0
BYD3_k127_3590875_2 Belongs to the WrbA family K03809 - 1.6.5.2 0.000000000000000000000000000000000000000000000000003342 185.0
BYD3_k127_3590875_3 Transglycosylase SLT domain - - - 0.0000000000000000000000000000000000000000003348 176.0
BYD3_k127_3590875_4 Acylphosphatase K01512 GO:0003674,GO:0003824,GO:0003998,GO:0006950,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0016787,GO:0016817,GO:0016818,GO:0050896 3.6.1.7 0.00000000000000000000001213 102.0
BYD3_k127_3592663_0 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000005334 250.0
BYD3_k127_3592663_1 Transcriptional regulator, HxlR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000286 256.0
BYD3_k127_3592663_2 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000004709 235.0
BYD3_k127_3592663_3 Limonene-1,2-epoxide hydrolase catalytic domain K10533 - 3.3.2.8 0.000000236 52.0
BYD3_k127_3594370_0 Phosphate transporter family K03306 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007401 289.0
BYD3_k127_3594370_1 Protein of unknown function DUF47 K07220 - - 0.000000000000000000000000000000000000000000000000002085 190.0
BYD3_k127_3594370_2 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000007931 100.0
BYD3_k127_3595188_0 Asparagine synthase K01953 - 6.3.5.4 0.0 1078.0
BYD3_k127_3595188_1 Transcriptional regulatory protein, C terminal - - - 0.00000000000000000000000000000000000000000000000000000000612 203.0
BYD3_k127_3595188_2 Response regulator, receiver K13246 - 3.1.4.52 0.000001024 53.0
BYD3_k127_359872_0 Glucose / Sorbosone dehydrogenase K21430 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004618 475.0
BYD3_k127_359872_1 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005275 293.0
BYD3_k127_359872_2 beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004886 297.0
BYD3_k127_359872_3 - - - - 0.00000000002863 68.0
BYD3_k127_3599012_0 methionine synthase K00548 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006464,GO:0006479,GO:0006520,GO:0006555,GO:0006575,GO:0006725,GO:0006730,GO:0006732,GO:0006760,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008168,GO:0008172,GO:0008213,GO:0008270,GO:0008276,GO:0008652,GO:0008705,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0019538,GO:0019752,GO:0019842,GO:0031419,GO:0032259,GO:0034641,GO:0035999,GO:0036094,GO:0036211,GO:0042084,GO:0042558,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0043414,GO:0043436,GO:0043603,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046653,GO:0046872,GO:0046906,GO:0046914,GO:0048037,GO:0050667,GO:0051186,GO:0071704,GO:0097159,GO:0140096,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007836 549.0
BYD3_k127_3599012_1 Methylenetetrahydrofolate reductase K00297 - 1.5.1.20 0.00000000000000000000000000000000000003198 145.0
BYD3_k127_3601874_0 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001879 278.0
BYD3_k127_3601874_1 Protein tyrosine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005505 274.0
BYD3_k127_3601874_2 PFAM Formylglycine-generating sulfatase enzyme - - - 0.00000000000000000000000000000001191 146.0
BYD3_k127_3602378_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008082 381.0
BYD3_k127_3602378_1 Concanavalin A-like lectin/glucanases superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005491 300.0
BYD3_k127_3603428_0 TIGRFAM ribonuclease, Rne Rng family K08301 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002941 276.0
BYD3_k127_3603428_1 maF-like protein K06287 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0030145,GO:0036218,GO:0036221,GO:0042802,GO:0043167,GO:0043169,GO:0046872,GO:0046914,GO:0047429 - 0.000000000000000000000000000000000000000000000000000000003915 205.0
BYD3_k127_3603428_2 Appr-1'-p processing enzyme - - - 0.00000000000000000000000000000000000000000000000000000397 197.0
BYD3_k127_3603428_3 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000001779 179.0
BYD3_k127_3604529_0 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001806 453.0
BYD3_k127_3604529_1 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.000000000000000000000000000000000000000000000000000000000000000000000006041 247.0
BYD3_k127_3604529_2 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.00000000000000000000000000001376 121.0
BYD3_k127_3604529_3 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 - - 0.0000000000000000000009772 97.0
BYD3_k127_3604529_4 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.0000000000000000925 87.0
BYD3_k127_3604529_5 Belongs to the bacterial ribosomal protein bL34 family K02914 - - 0.0000000000003391 70.0
BYD3_k127_3606966_0 Protein of unknown function (DUF1343) - - - 1.044e-212 670.0
BYD3_k127_3606966_1 TIGRFAM drug resistance transporter, EmrB QacA subfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006313 451.0
BYD3_k127_3606966_2 - - - - 0.0000000000000000000000000000000000000003478 155.0
BYD3_k127_3606966_3 - - - - 0.0000000000000000003659 90.0
BYD3_k127_3606966_4 - - - - 0.0000000000000000308 84.0
BYD3_k127_360984_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002767 521.0
BYD3_k127_360984_1 Domain of unknown function (DUF4440) - - - 0.00006204 50.0
BYD3_k127_3610800_0 CoA-transferase family III - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005697 571.0
BYD3_k127_3610800_1 Peptidase family M48 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000246 492.0
BYD3_k127_3610800_10 TonB C terminal K03832 - - 0.00001003 50.0
BYD3_k127_3610800_2 4-coumarate--CoA - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002218 468.0
BYD3_k127_3610800_3 Glutathione S-transferase, C-terminal domain K00799 - 2.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001987 321.0
BYD3_k127_3610800_4 MltA-interacting protein MipA - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002036 340.0
BYD3_k127_3610800_5 Belongs to the glutathione peroxidase family K00432 - 1.11.1.9 0.000000000000000000000000000000000000000000000000000000000000000000002751 238.0
BYD3_k127_3610800_6 Domain in cystathionine beta-synthase and other proteins. - - - 0.00000000000000000000000000000000000000000000000000009736 191.0
BYD3_k127_3610800_7 Tyrosine phosphatase family K01104 - 3.1.3.48 0.000000000000000000000000000000000000001007 158.0
BYD3_k127_3610800_8 - - - - 0.000000000000000000000000000000001597 134.0
BYD3_k127_3610800_9 - - - - 0.000004316 58.0
BYD3_k127_3613565_0 FAD binding domain K00486 - 1.14.13.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001059 347.0
BYD3_k127_3613565_1 phenazine biosynthesis protein PhzF family - - - 0.000000000000000000000000000000000000002859 152.0
BYD3_k127_3613922_0 Transcriptional regulatory protein, C terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001833 255.0
BYD3_k127_3613922_1 - - - - 0.000000000001934 75.0
BYD3_k127_3615354_0 Transmembrane secretion effector - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000222 493.0
BYD3_k127_3615354_1 beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008366 419.0
BYD3_k127_3615354_2 NAD(P)H-dependent FMN reductase K19784 - - 0.000000000000000000000000000000000000000000000000000000000000000000286 233.0
BYD3_k127_3615354_3 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000001854 211.0
BYD3_k127_3615354_4 - - - - 0.00000000000000000000000000000000000000002856 159.0
BYD3_k127_3615354_5 helix_turn_helix, arabinose operon control protein - - - 0.00000000000000000000000000000000001003 149.0
BYD3_k127_3619218_0 PFAM glycoside hydrolase, family 1 K01223,K05350 - 3.2.1.21,3.2.1.86 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001295 587.0
BYD3_k127_3619218_1 Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003177 362.0
BYD3_k127_3619218_2 Beta-galactosidase jelly roll domain K01195 - 3.2.1.31 0.0000000000000000000000000000000000000007589 154.0
BYD3_k127_3628679_0 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 - 2.1.1.199 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004647 352.0
BYD3_k127_3628679_1 Catalyzes cross-linking of the peptidoglycan cell wall at the division septum K03587 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001102 322.0
BYD3_k127_3628679_2 Belongs to the MraZ family K03925 - - 0.00000000000000000000000000000000000000000000000000006342 190.0
BYD3_k127_3628679_3 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic K03586 - - 0.0000000000000005527 87.0
BYD3_k127_3635460_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001216 438.0
BYD3_k127_3636804_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004318 308.0
BYD3_k127_3636804_1 Concanavalin A-like lectin/glucanases superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000003183 226.0
BYD3_k127_3637739_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K15726 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001166 376.0
BYD3_k127_3637739_1 Outer membrane efflux protein K15725 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005404 283.0
BYD3_k127_3637739_2 Barrel-sandwich domain of CusB or HlyD membrane-fusion K15727 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001425 284.0
BYD3_k127_3637739_3 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.00000000000000000000000000000000000000000000000000000000000003629 223.0
BYD3_k127_3637739_4 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.000000000000002824 77.0
BYD3_k127_3637739_6 - - - - 0.00003322 54.0
BYD3_k127_3640335_0 Redoxin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001165 297.0
BYD3_k127_3640335_1 Belongs to the ompA family - - - 0.00000000000001909 83.0
BYD3_k127_3640745_0 homoserine kinase activity K02204 - 2.7.1.39 0.0 1323.0
BYD3_k127_3640745_1 Glycogen debranching enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001085 395.0
BYD3_k127_3641433_0 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002264 359.0
BYD3_k127_3643474_0 Glucose / Sorbosone dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004791 629.0
BYD3_k127_3643474_1 Peptidase family M28 K19702 - 3.4.11.24 0.0000000000000000000000002376 123.0
BYD3_k127_3643474_2 Transmembrane secretion effector - - - 0.00000000000000006049 82.0
BYD3_k127_364651_0 Glutathione S-transferase, C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004991 385.0
BYD3_k127_364651_1 Domain of Unknown Function (DUF748) - - - 0.0000000000000000000000000000000000000000000000000000000000005946 218.0
BYD3_k127_364651_2 BlaR1 peptidase M56 - - - 0.000000000000000000000000000000000000000000000000005794 199.0
BYD3_k127_364651_3 Beta-lactamase class C and other penicillin binding proteins - - - 0.0000000000000000000000000000000000000000005082 168.0
BYD3_k127_364651_4 Penicillinase repressor - - - 0.0000000000000000000000000000000000000002844 154.0
BYD3_k127_364651_5 TraB family - - - 0.0000000000000000000000000000000000000006838 162.0
BYD3_k127_364651_6 PFAM Beta-lactamase K18988 - 3.4.16.4 0.00000000000000000000000000000000000002486 151.0
BYD3_k127_364737_0 serine threonine protein phosphatase - - - 0.00000000000000000000000000000000000000000003927 169.0
BYD3_k127_364737_1 PFAM Aminotransferase class I and II - - - 0.000000000000000000000000000000000000004547 151.0
BYD3_k127_364737_2 Inner membrane component of T3SS, cytoplasmic domain - - - 0.0000000000000000000000000000000002252 145.0
BYD3_k127_3656282_0 MotA/TolQ/ExbB proton channel family - - - 0.00000000000000000000000000000000000000000000000000000000000000000456 233.0
BYD3_k127_3656282_1 Biopolymer transport protein ExbD/TolR - - - 0.00000000000000000000000000000000000000002483 158.0
BYD3_k127_3656282_2 COG0457 FOG TPR repeat - - - 0.00000000000000000000000000000000000001764 150.0
BYD3_k127_3656282_3 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins - - - 0.0000000000000000000002836 106.0
BYD3_k127_3656282_4 Biopolymer transport protein ExbD/TolR - - - 0.000000000000000000008451 100.0
BYD3_k127_3656282_5 - - - - 0.0000000000001667 78.0
BYD3_k127_3659523_0 Involved in the tonB-independent uptake of proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001513 366.0
BYD3_k127_3659523_1 Translation initiation inhibitor, yjgF family - - - 0.000000000000000000000000000000000000001274 153.0
BYD3_k127_3659523_2 AraC family K07506 - - 0.0000000000000000000000005746 110.0
BYD3_k127_3659523_3 - - - - 0.000000000000000000006397 98.0
BYD3_k127_3659523_4 Pilus assembly protein PilX K02673 - - 0.00000000003001 77.0
BYD3_k127_3659523_5 Prolyl oligopeptidase family K06889 - - 0.000002082 56.0
BYD3_k127_3668542_0 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K01810 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 5.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001979 581.0
BYD3_k127_3668542_1 Polysaccharide biosynthesis protein K08679 - 5.1.3.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008373 538.0
BYD3_k127_3668542_2 cellulase activity - - - 0.000000000000000000000000000000000000000001114 177.0
BYD3_k127_3668542_3 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K02474 - - 0.00000000000001953 73.0
BYD3_k127_3668542_4 23S rRNA-intervening sequence protein - - - 0.00000000000002886 80.0
BYD3_k127_3668542_5 Bacterial Ig-like domain 2 - - - 0.00000002099 67.0
BYD3_k127_3670264_0 Ferredoxin-fold anticodon binding domain K01889 - 6.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001121 422.0
BYD3_k127_3670264_1 2-methylcitrate dehydratase K01720 - 4.2.1.79 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001161 413.0
BYD3_k127_3670264_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K10715 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000005829 254.0
BYD3_k127_3670264_3 General secretion pathway protein K02455 - - 0.000000000000000000000000000000000000000000000000000000000000006125 222.0
BYD3_k127_3670264_4 TIGRFAM general secretion pathway protein F K02455 - - 0.000000000000000000000000000000000004808 139.0
BYD3_k127_3671043_0 Winged helix DNA-binding domain K09927 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003701 437.0
BYD3_k127_3671043_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004725 257.0
BYD3_k127_3675465_0 Alpha-amylase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009443 518.0
BYD3_k127_3675465_1 Abc transporter K02049 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001079 351.0
BYD3_k127_3675465_2 Binding-protein-dependent transport system inner membrane component K02050,K15552,K15554 - - 0.00000001644 55.0
BYD3_k127_3679202_0 Orn/Lys/Arg decarboxylase, N-terminal domain K01581 - 4.1.1.17 0.0 1032.0
BYD3_k127_3679202_1 Orn/Lys/Arg decarboxylase, N-terminal domain K01581 - 4.1.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009422 314.0
BYD3_k127_3682791_0 Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins K02461 GO:0002790,GO:0006810,GO:0008104,GO:0008150,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0032940,GO:0033036,GO:0042886,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0071702,GO:0071705 - 0.00000000000000000000000000002916 132.0
BYD3_k127_3682791_1 COG3156 Type II secretory pathway, component PulK K02460 GO:0002790,GO:0006810,GO:0008104,GO:0008150,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0032940,GO:0033036,GO:0042886,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0071702,GO:0071705 - 0.0000000000000000000005656 102.0
BYD3_k127_3682791_2 Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins K02462 - - 0.00000000000004208 78.0
BYD3_k127_3682791_3 Type II secretion system (T2SS), protein N K02463 GO:0002790,GO:0006810,GO:0008104,GO:0008150,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0032940,GO:0033036,GO:0042886,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0071702,GO:0071705 - 0.000005658 49.0
BYD3_k127_3694469_0 Transcriptional regulatory protein, C terminal - - - 0.00000000000000000000002117 115.0
BYD3_k127_3694469_1 Transcriptional regulatory protein, C terminal - - - 0.0000000000000000265 95.0
BYD3_k127_3694469_2 - - - - 0.000135 51.0
BYD3_k127_369483_0 BlaR1 peptidase M56 - - - 0.000000000000000000000000000000000000000000000001068 192.0
BYD3_k127_369483_1 ankyrin 3, node of Ranvier (ankyrin G) - - - 0.00000000008364 74.0
BYD3_k127_369483_2 GMC oxidoreductase - - - 0.00001476 48.0
BYD3_k127_3695463_0 Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione K01759 - 4.4.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000004074 239.0
BYD3_k127_3695463_1 LysR substrate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000003791 211.0
BYD3_k127_3695463_2 - - - - 0.00000000000000000000000000000000000000000005075 174.0
BYD3_k127_371682_0 Calx-beta domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002369 613.0
BYD3_k127_371682_1 - - - - 0.00000000000000000000000000000003581 134.0
BYD3_k127_373068_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 0.0000000000000000000000000000000000000000000000000000003207 196.0
BYD3_k127_373068_1 Glyoxalase-like domain K05606 - 5.1.99.1 0.000000000000000000000000000000000000000001058 159.0
BYD3_k127_373068_2 helix_turn_helix multiple antibiotic resistance protein - - - 0.0000000000000000000000000000000004634 136.0
BYD3_k127_373068_3 Phenazine biosynthesis - - - 0.00000000000000000000000000001708 121.0
BYD3_k127_373068_4 - - - - 0.0000000000000000001713 92.0
BYD3_k127_373068_5 - - - - 0.000000001268 64.0
BYD3_k127_3731903_0 2-hydroxychromene-2-carboxylate isomerase K14584 - 5.99.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000308 252.0
BYD3_k127_3731903_1 diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000001132 212.0
BYD3_k127_3731903_2 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.000000000000000000000000000266 121.0
BYD3_k127_3735855_0 Belongs to the CarA family K01956 - 6.3.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006689 547.0
BYD3_k127_3735855_1 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 GO:0006457,GO:0008150,GO:0009987 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001067 435.0
BYD3_k127_3735855_2 Carbamoyl-phosphate synthetase ammonia chain K01955 GO:0000050,GO:0000166,GO:0003674,GO:0003824,GO:0004087,GO:0004088,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005951,GO:0006082,GO:0006139,GO:0006206,GO:0006220,GO:0006221,GO:0006520,GO:0006525,GO:0006526,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016053,GO:0016597,GO:0016874,GO:0016879,GO:0016884,GO:0017076,GO:0018130,GO:0019438,GO:0019627,GO:0019637,GO:0019693,GO:0019752,GO:0019856,GO:0030554,GO:0031406,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046112,GO:0046390,GO:0046394,GO:0046483,GO:0046872,GO:0055086,GO:0071704,GO:0071941,GO:0072527,GO:0072528,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494 6.3.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003076 287.0
BYD3_k127_3735855_3 Dihydrodipicolinate reductase, C-terminus K00215 - 1.17.1.8 0.000000000000000000000000000000000000000000000000000000000000000000001193 244.0
BYD3_k127_374367_0 Glycosyl hydrolase 36 superfamily, catalytic domain K13688 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005666 284.0
BYD3_k127_374367_1 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000002552 139.0
BYD3_k127_374367_2 Anti-sigma-K factor rskA - - - 0.000000000000000000000000000000006119 138.0
BYD3_k127_374689_0 hydrolase activity, acting on ester bonds - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000244 525.0
BYD3_k127_374689_1 Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor K00697 - 2.4.1.15,2.4.1.347 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001449 478.0
BYD3_k127_374689_2 Glutathione-dependent formaldehyde-activating - - - 0.00000000000000000000000000000000000000000000000000000000000004545 216.0
BYD3_k127_374689_3 Serine aminopeptidase, S33 K06889 - - 0.000000000000000000000000000000000000000000000000000000001243 211.0
BYD3_k127_374689_4 ABC transporter K01990 - - 0.00000000000000000000000000000000000000000000000000001485 191.0
BYD3_k127_374689_5 - K01992 - - 0.00000000000000000000000000000000000000000000000000656 195.0
BYD3_k127_374689_6 PFAM Helix-turn-helix K07726 - - 0.0000000000000000000000000000000000000000001078 161.0
BYD3_k127_374689_7 Cytotoxic translational repressor of toxin-antitoxin stability system - - - 0.000000000000000000000000000000000000000000238 162.0
BYD3_k127_374689_8 Protein involved in outer membrane biogenesis - - - 0.00000000000000000001139 103.0
BYD3_k127_3748984_0 histidine kinase A domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001053 263.0
BYD3_k127_3748984_1 TonB dependent receptor - - - 0.00001248 47.0
BYD3_k127_3750008_0 Cupin domain - - - 0.0000000000000000000000000000000000000000000000000000000006627 206.0
BYD3_k127_3750008_1 Belongs to the enoyl-CoA hydratase isomerase family K00022,K07514 - 1.1.1.35,4.2.1.17,5.3.3.8 0.0000000000001855 72.0
BYD3_k127_3750008_2 Adenylate cyclase - - - 0.000003223 60.0
BYD3_k127_376414_0 X-Pro dipeptidyl-peptidase K06978 - - 1.201e-201 643.0
BYD3_k127_376414_1 Positively regulates the transcription of the maltose regulon whose gene products are responsible for uptake and catabolism of malto-oligosaccharides. Binds and recognizes a DNA motif (called the malT box) 5'-GGA TG GA-3' K03556 GO:0003674,GO:0003700,GO:0005488,GO:0005515,GO:0005975,GO:0006355,GO:0008150,GO:0008152,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0030246,GO:0031323,GO:0031326,GO:0042802,GO:0044238,GO:0048031,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0070492,GO:0071704,GO:0080090,GO:0140110,GO:1903506,GO:2000112,GO:2001141 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003418 607.0
BYD3_k127_3773372_0 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source K01916 GO:0003674,GO:0003824,GO:0003952,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008795,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016874,GO:0016879,GO:0016880,GO:0016884,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019365,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0033554,GO:0034355,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0043094,GO:0043173,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046496,GO:0050896,GO:0051186,GO:0051188,GO:0051716,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 6.3.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005257 314.0
BYD3_k127_3773372_1 TIGRFAM asparagine synthase (glutamine-hydrolyzing) K01953 - 6.3.5.4 0.0000000000000000000000000000000000000000157 158.0
BYD3_k127_3773372_2 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K05606 - 5.1.99.1 0.000000000000000000000000000003651 124.0
BYD3_k127_3773372_3 Bacterial transferase hexapeptide (six repeats) K00638,K00661,K18234 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008374,GO:0016740,GO:0016746,GO:0016747,GO:0044424,GO:0044444,GO:0044464 2.3.1.28,2.3.1.79 0.0000000000000000000000000003573 121.0
BYD3_k127_3802899_0 NmrA-like family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003963 319.0
BYD3_k127_3802899_1 DNA-binding transcription factor activity K15973 - - 0.00000000000000000000000000000000000000000000003001 174.0
BYD3_k127_3812554_0 X-Pro dipeptidyl-peptidase (S15 family) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005842 475.0
BYD3_k127_3812554_1 Phosphoinositide phospholipase C, Ca2+-dependent - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002383 418.0
BYD3_k127_3812554_2 TonB dependent receptor - - - 0.000000000000000000000000000000005761 130.0
BYD3_k127_3821345_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001894 567.0
BYD3_k127_3821345_1 Anthranilate synthase component I K01657,K01665 - 2.6.1.85,4.1.3.27 0.000000000000000000000000000000000000000000000873 173.0
BYD3_k127_3821345_2 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.00000000000000000001635 91.0
BYD3_k127_382883_0 Glycosyltransferase family 20 K00697,K03692 - 2.4.1.15,2.4.1.213,2.4.1.347 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003468 491.0
BYD3_k127_382883_1 ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity K06048 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001917 413.0
BYD3_k127_382883_10 periplasmic or secreted lipoprotein - - - 0.00000000000000000000007866 103.0
BYD3_k127_382883_12 SPW repeat - - - 0.000000000000000000606 90.0
BYD3_k127_382883_13 - - - - 0.00000000000000005561 83.0
BYD3_k127_382883_14 - - - - 0.0000000000001195 79.0
BYD3_k127_382883_15 - - - - 0.000000001562 63.0
BYD3_k127_382883_16 - - - - 0.00000001147 64.0
BYD3_k127_382883_17 Virulence factor BrkB K07058 - - 0.00003359 47.0
BYD3_k127_382883_2 mechanosensitive ion channel K22044 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002107 334.0
BYD3_k127_382883_3 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006595 290.0
BYD3_k127_382883_4 Belongs to the peptidase M50B family - - - 0.00000000000000000000000000000000000000000000000000000000000004941 229.0
BYD3_k127_382883_5 Removes the phosphate from trehalose 6-phosphate to produce free trehalose K01087 - 3.1.3.12 0.0000000000000000000000000000000000000000000000000000004148 207.0
BYD3_k127_382883_6 Las17-binding protein actin regulator - - - 0.0000000000000000000000000000000000000000000000000000006456 201.0
BYD3_k127_382883_7 MarR family - - - 0.000000000000000000000000000000000000000003005 163.0
BYD3_k127_382883_8 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.0000000000000000000000000000000000000008122 164.0
BYD3_k127_382883_9 - - - - 0.0000000000000000000000000009688 113.0
BYD3_k127_3840161_0 PEGA domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005996 516.0
BYD3_k127_3853137_0 phosphoglycerate mutase activity K01834 GO:0003674,GO:0003824,GO:0004619,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006109,GO:0006139,GO:0006140,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009894,GO:0009987,GO:0010675,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016866,GO:0016868,GO:0017144,GO:0018130,GO:0019219,GO:0019220,GO:0019222,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0031323,GO:0031329,GO:0032787,GO:0034248,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0043455,GO:0043456,GO:0043470,GO:0043471,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046538,GO:0046700,GO:0046939,GO:0050789,GO:0050794,GO:0051171,GO:0051174,GO:0051186,GO:0051188,GO:0051193,GO:0051196,GO:0055086,GO:0060255,GO:0062012,GO:0065007,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0080090,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1902031 5.4.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008202 370.0
BYD3_k127_3853137_1 HxlR family transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004955 307.0
BYD3_k127_3853137_2 COG3209 Rhs family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001726 280.0
BYD3_k127_3853137_3 Choline/ethanolamine kinase - - - 0.0000000000000000001883 96.0
BYD3_k127_3858206_0 Belongs to the peptidase S8 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001283 610.0
BYD3_k127_3858206_1 Specifically methylates the adenine in position 2030 of 23S rRNA K07115 - 2.1.1.266 0.000000000000000000000000000000000000000000000000000000000000000000000000000001534 271.0
BYD3_k127_3858206_2 PA domain K14647 GO:0005575,GO:0005576 - 0.00000000000000000000000000000000000000000000000000000000003944 209.0
BYD3_k127_3858206_3 - - - - 0.00000000000002205 83.0
BYD3_k127_3858206_4 - - - - 0.000000001158 67.0
BYD3_k127_3864127_0 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 - 2.2.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002283 345.0
BYD3_k127_3864127_1 Universal stress protein - - - 0.000000000000000000000000000000000001066 143.0
BYD3_k127_3864127_2 Acyl-CoA synthetase (NDP forming) K09181 - - 0.00000000000000000000000000000001726 135.0
BYD3_k127_3864127_3 universal stress protein K14055 - - 0.0000000000000000000000000000002697 136.0
BYD3_k127_3864127_4 COG2010 Cytochrome c, mono- and diheme variants - - - 0.00000000000000000000004642 102.0
BYD3_k127_3864127_5 COG2010 Cytochrome c, mono- and diheme variants - - - 0.00000000000000000000549 98.0
BYD3_k127_3869334_0 - - - - 4.973e-203 659.0
BYD3_k127_3869334_1 Belongs to the DEAD box helicase family K11927 - 3.6.4.13 0.0000000000000000000000000000000000000000000024 167.0
BYD3_k127_3869334_2 Sensory box histidine kinase response regulator - - - 0.00000000000000002147 85.0
BYD3_k127_3874092_0 cytochrome C peroxidase K00428 - 1.11.1.5 0.0000000000000000000000000000000000000000000000006544 178.0
BYD3_k127_3874092_1 PFAM blue (type 1) copper domain protein - - - 0.0000000000000000000001534 107.0
BYD3_k127_3874092_2 chemotaxis - - - 0.0000000000000000002639 100.0
BYD3_k127_3874092_3 Cytochrome c - - - 0.00000000001063 74.0
BYD3_k127_3890053_0 Penicillin amidase K07116 GO:0005575,GO:0005576 3.5.1.97 0.0 1088.0
BYD3_k127_3890053_1 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01533,K17686 - 3.6.3.4,3.6.3.54 1.141e-263 831.0
BYD3_k127_3890053_2 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 0.000000000000000000000000000000000000000000000000001477 188.0
BYD3_k127_3890053_3 helix_turn_helix, mercury resistance K19591 - - 0.0000000000000000000000000000000000000000000003467 176.0
BYD3_k127_3890053_4 Belongs to the ompA family - - - 0.0000000000000000000000000000000000000001162 162.0
BYD3_k127_3890053_5 Domain of unknown function (DUF4398) - - - 0.00007543 51.0
BYD3_k127_3897996_0 Hydrolase of alkaline phosphatase superfamily K07014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007419 336.0
BYD3_k127_3897996_1 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000001341 220.0
BYD3_k127_3897996_2 PFAM transferase hexapeptide repeat containing protein K00661 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008374,GO:0008925,GO:0009987,GO:0016043,GO:0016407,GO:0016413,GO:0016740,GO:0016746,GO:0016747,GO:0022607,GO:0042802,GO:0043933,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0051259,GO:0051260,GO:0065003,GO:0070206,GO:0070207,GO:0071840 2.3.1.79 0.00000002541 65.0
BYD3_k127_390204_1 phosphorelay signal transduction system K03556 - - 0.000000000000000000000000000000000000000000000000000000000000000000000003616 250.0
BYD3_k127_3903921_0 alpha beta - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002812 498.0
BYD3_k127_3903921_1 Lactonase, 7-bladed beta-propeller - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001249 286.0
BYD3_k127_3903921_2 PFAM amine oxidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006888 279.0
BYD3_k127_3903921_3 Protein of unknown function (DUF1062) - - - 0.00000000000000000000000000001213 126.0
BYD3_k127_3905950_0 FAD dependent oxidoreductase K09471 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001266 304.0
BYD3_k127_3905950_1 COG0659 Sulfate permease and related transporters (MFS superfamily) K03321 GO:0003333,GO:0003674,GO:0005215,GO:0005310,GO:0005326,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0006835,GO:0006836,GO:0006855,GO:0006865,GO:0008150,GO:0008272,GO:0008509,GO:0008514,GO:0015075,GO:0015103,GO:0015116,GO:0015138,GO:0015141,GO:0015171,GO:0015172,GO:0015179,GO:0015183,GO:0015238,GO:0015318,GO:0015556,GO:0015698,GO:0015711,GO:0015740,GO:0015741,GO:0015744,GO:0015800,GO:0015807,GO:0015810,GO:0015849,GO:0015893,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0042221,GO:0042493,GO:0044425,GO:0044459,GO:0044464,GO:0046942,GO:0046943,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0070778,GO:0071422,GO:0071702,GO:0071705,GO:0071944,GO:0072348,GO:0098656,GO:0098660,GO:0098661,GO:1901682,GO:1902358,GO:1902475,GO:1903825,GO:1905039 - 0.00000000000000000000000000000000000000001847 157.0
BYD3_k127_3905950_2 Universal stress protein - - - 0.0000000000000000000000000000000003042 136.0
BYD3_k127_3905950_3 Domain in cystathionine beta-synthase and other proteins. - - - 0.000000000000000000000000000000001144 134.0
BYD3_k127_3905950_4 STAS domain K03321 - - 0.0000000000000009171 85.0
BYD3_k127_3905950_5 - - - - 0.0000000000004978 69.0
BYD3_k127_3907384_0 ATP-grasp domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002015 437.0
BYD3_k127_3907384_1 COG0438 Glycosyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001629 388.0
BYD3_k127_3907384_2 Polysaccharide biosynthesis protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004765 353.0
BYD3_k127_3907384_3 -O-antigen K02847,K13009 - - 0.00000000000000000000000000000000000000000000000000000000000001628 239.0
BYD3_k127_3907384_4 Asparagine synthase, glutamine-hydrolyzing K01953 - 6.3.5.4 0.000000000000000000000000000000001464 142.0
BYD3_k127_3907384_5 TPR repeat - - - 0.00000000002312 73.0
BYD3_k127_3911324_0 Glutathione S-transferase, C-terminal domain K00799 - 2.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000006212 237.0
BYD3_k127_3911324_1 Pyridoxamine 5'-phosphate oxidase like - - - 0.0000000000000000000000000000000000000000000000000000000000002598 222.0
BYD3_k127_3911324_2 - - - - 0.000000000000000000000000000003225 123.0
BYD3_k127_3911324_3 SMART Transport-associated and nodulation region K04065 - - 0.000000000000000001285 93.0
BYD3_k127_3911324_4 Plasmid stabilization - - - 0.000000000000000002378 85.0
BYD3_k127_3916734_0 COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit K00499,K16319 - 1.14.12.1,1.14.15.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003132 602.0
BYD3_k127_3916734_1 Aldo/keto reductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008134 589.0
BYD3_k127_3916734_2 Cupin 2, conserved barrel domain protein - - - 0.000000000000000000000000000000000000000000000000000000003915 205.0
BYD3_k127_3916734_3 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000003169 171.0
BYD3_k127_3916734_4 Glutathione S-transferase, C-terminal domain K00799 - 2.5.1.18 0.0000000000000000000000000000000000003779 141.0
BYD3_k127_3916734_5 ATP-independent chaperone mediated protein folding - - - 0.000000000000000000000000000000000004626 144.0
BYD3_k127_3916734_6 Gamma-glutamyl cyclotransferase, AIG2-like - - - 0.0000000000000000000000000000000002714 139.0
BYD3_k127_3917050_0 Belongs to the TPP enzyme family K03336 - 3.7.1.22 4.525e-252 790.0
BYD3_k127_3917050_1 Uncharacterized protein conserved in bacteria (DUF2090) K03338 - 2.7.1.92 1.191e-201 650.0
BYD3_k127_3917050_2 Xylose isomerase K03335 - 4.2.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000017 377.0
BYD3_k127_3917050_3 KduI/IolB family K03337 - 5.3.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002528 323.0
BYD3_k127_392944_0 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002847 447.0
BYD3_k127_392944_1 PAS domain K07646 - 2.7.13.3 0.000000000000000002803 91.0
BYD3_k127_3930421_0 receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004236 308.0
BYD3_k127_3930421_1 esterase lipase - - - 0.000000000000000000000000000000000000000000000003723 186.0
BYD3_k127_3930421_2 Domain of unknown function (DUF3413) K07014 - - 0.000222 48.0
BYD3_k127_3933222_0 TonB-dependent receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009268 571.0
BYD3_k127_3933222_1 Cobalamin-independent synthase, Catalytic domain K00549,K22363 - 2.1.1.14,4.4.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001039 550.0
BYD3_k127_3933222_2 CoA-transferase family III - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002479 488.0
BYD3_k127_3933222_3 citrate synthase K01647 - 2.3.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000425 339.0
BYD3_k127_3933222_4 helix_turn_helix isocitrate lyase regulation K02624 - - 0.00000000000000000000000000000000000000000000000000000002493 206.0
BYD3_k127_3933222_5 Penicillinase repressor - - - 0.000000000000000000000000000000000001972 141.0
BYD3_k127_3936277_0 Oxidoreductase family, C-terminal alpha/beta domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005987 316.0
BYD3_k127_3936277_1 Major facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003573 254.0
BYD3_k127_3936277_2 Zinc-binding dehydrogenase - - - 0.0000000000000000000000000000000000000000000001118 171.0
BYD3_k127_3937202_0 Sugar (and other) transporter K03761 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001027 531.0
BYD3_k127_3937202_1 beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000000000003923 237.0
BYD3_k127_3937202_2 - - - - 0.00000715 56.0
BYD3_k127_3937202_3 - - - - 0.00006222 50.0
BYD3_k127_3937219_0 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol K06131 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007878 567.0
BYD3_k127_3946817_0 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003874 299.0
BYD3_k127_3946817_1 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003778 267.0
BYD3_k127_3946817_2 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 - 5.4.99.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000005084 265.0
BYD3_k127_3946817_3 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 - - 0.0000000000000000000000000000000001542 134.0
BYD3_k127_3946817_4 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.000000000000000000000000002316 115.0
BYD3_k127_3947090_0 serine threonine protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007049 471.0
BYD3_k127_3947090_1 Von willebrand factor, type a K07114 - - 0.00000000000000000000000000000000007899 141.0
BYD3_k127_3948514_0 aminopeptidase K01256 - 3.4.11.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001957 597.0
BYD3_k127_3948514_1 Protein of unknown function (DUF418) K07148 - - 0.000000000000000000000000000000000000000000000000000000000005828 223.0
BYD3_k127_3952346_0 oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002574 479.0
BYD3_k127_3952346_1 Mo-co oxidoreductase dimerisation domain K17225 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000103 432.0
BYD3_k127_3952346_2 LysR substrate binding domain K16135 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009907 389.0
BYD3_k127_3952346_3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K08738 - - 0.00000000000000000000000000000000000000000000000000001222 194.0
BYD3_k127_3952346_4 TRAP-type C4-dicarboxylate transport system periplasmic component - - - 0.000000000000000000000000000000000000007504 151.0
BYD3_k127_3954824_0 PFAM glycoside hydrolase 15-related - - - 3.264e-199 633.0
BYD3_k127_3954824_1 KR domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000008823 235.0
BYD3_k127_3954824_2 - - - - 0.000000000000000000000000000000000000000000000000000000000001436 217.0
BYD3_k127_3956435_0 Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) K01626 - 2.5.1.54 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002979 555.0
BYD3_k127_3956435_1 Mycothiol maleylpyruvate isomerase N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001208 309.0
BYD3_k127_3956435_2 Belongs to the enoyl-CoA hydratase isomerase family K00626,K08299 - 2.3.1.9,4.2.1.149 0.0000000000000000000000000000000000000000000000000000000000000000000000001967 258.0
BYD3_k127_3956435_3 Belongs to the TPP enzyme family K01652 - 2.2.1.6 0.0003912 43.0
BYD3_k127_3962553_0 AI-2E family transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003691 331.0
BYD3_k127_3962553_1 VIT family - - - 0.00000000000000000000000000000000000000005069 161.0
BYD3_k127_3962553_2 AraC-binding-like domain - - - 0.0000000000000001772 88.0
BYD3_k127_3962553_3 - - - - 0.00000000004043 68.0
BYD3_k127_3963186_0 COG4149 ABC-type molybdate transport system, permease component K02018 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002502 305.0
BYD3_k127_3963186_1 Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system K02017 - 3.6.3.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002506 302.0
BYD3_k127_3963186_2 helix_turn_helix ASNC type - - - 0.00000000000000002698 82.0
BYD3_k127_3967566_0 acyl-CoA dehydrogenase K00249 - 1.3.8.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005576 417.0
BYD3_k127_3967566_1 MOSC domain protein beta barrel domain protein K07140 - - 0.0000000000000000000000000000000000000000000000000000000000000000000004773 246.0
BYD3_k127_3967566_2 Acyl-CoA dehydrogenase, middle domain - - - 0.000000000000000000000000000000000000000000000000000000000008938 211.0
BYD3_k127_3968556_0 PFAM binding-protein-dependent transport systems inner membrane component K17322 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000024 458.0
BYD3_k127_3968556_1 ABC-type sugar transport system, permease component K17323 - - 0.0000000000000000000000000000000000000000000000000945 196.0
BYD3_k127_3968556_2 TOBE domain K17325 - - 0.00000000000000000000000000006222 121.0
BYD3_k127_3968598_0 Peptidase family M3 K01414 - 3.4.24.70 9.382e-225 715.0
BYD3_k127_3968598_1 Histidine kinase - - - 0.0000000000000000000000000000000000000000000002128 181.0
BYD3_k127_3969361_0 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005239 322.0
BYD3_k127_3969361_1 hydrolase of the alpha beta-hydrolase fold K07020 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004458 277.0
BYD3_k127_3969361_2 DNA ligase K01971 - 6.5.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000001365 248.0
BYD3_k127_3969361_3 - - - - 0.0005045 47.0
BYD3_k127_397595_0 Subtilase family K14645 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002425 425.0
BYD3_k127_397595_1 Enoyl-CoA hydratase/isomerase K15866 - 5.3.3.18 0.00000000000000000000000000000000000000000000000000000000000000002968 235.0
BYD3_k127_3990483_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K11177 - 1.17.1.4 0.0 1144.0
BYD3_k127_3990483_1 acyl-CoA dehydrogenase K00249 - 1.3.8.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001901 464.0
BYD3_k127_3990483_2 CO dehydrogenase flavoprotein C-terminal domain K11178 - 1.17.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002107 377.0
BYD3_k127_3990483_3 [2Fe-2S] binding domain K03518,K13483 - 1.2.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000005631 258.0
BYD3_k127_3990483_4 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000008843 157.0
BYD3_k127_3990483_5 Putative diguanylate phosphodiesterase - - - 0.00000000000000000000000000001574 121.0
BYD3_k127_3998315_0 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001153 408.0
BYD3_k127_3998315_1 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007603 372.0
BYD3_k127_3998315_2 Transcriptional regulator K02529 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008173 370.0
BYD3_k127_3998315_3 COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006008 366.0
BYD3_k127_3998315_4 Na melibiose symporter and related transporters K03292 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004162 319.0
BYD3_k127_3998315_5 - - - - 0.00000000000000000000000000000000000000000000000252 180.0
BYD3_k127_3998315_6 - - - - 0.000000000000000000000000000000000000002513 166.0
BYD3_k127_4000683_0 Secretin and TonB N terminus short domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001109 432.0
BYD3_k127_4000683_1 Domain of unknown function (DUF4974) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000679 265.0
BYD3_k127_4000683_2 ECF sigma factor - - - 0.00000000000000000000000000000000000000000000000000000003033 201.0
BYD3_k127_4000683_3 WD40-like Beta Propeller Repeat - - - 0.0000000000000000000000000000000000000000000000001673 201.0
BYD3_k127_4000683_4 Prolyl oligopeptidase family - - - 0.0000000000000000000000000000000000000000000000005729 195.0
BYD3_k127_4008946_0 Putative adhesin - - - 0.000000000000000000000000000000000001304 149.0
BYD3_k127_4008946_1 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000006615 83.0
BYD3_k127_4008946_2 - - - - 0.00001468 55.0
BYD3_k127_4014211_0 Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg- protoporphyrin IX - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002516 278.0
BYD3_k127_40176_0 Polyketide cyclase / dehydrase and lipid transport - - - 0.000000000000000000000000000000000000000004571 168.0
BYD3_k127_4022365_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001491 290.0
BYD3_k127_4022365_1 ClpX C4-type zinc finger - - - 0.000000000000000000001659 97.0
BYD3_k127_4022365_2 FG-GAP repeat protein - - - 0.0007833 48.0
BYD3_k127_4025136_0 Bacterial low temperature requirement A protein (LtrA) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001792 459.0
BYD3_k127_4025136_1 Arginase family - - - 0.000000000000000000000000005474 111.0
BYD3_k127_4027667_0 antibiotic catabolic process K18235 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006636 364.0
BYD3_k127_4027667_1 Major facilitator superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009074 284.0
BYD3_k127_4027667_2 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000006865 188.0
BYD3_k127_4027667_3 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000000000000000000000000000002715 160.0
BYD3_k127_4027667_4 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000001845 126.0
BYD3_k127_4027667_5 helix_turn_helix, arabinose operon control protein - - - 0.0000000000000000002298 88.0
BYD3_k127_4027667_6 Domain of unknown function (DUF892) - - - 0.00000000000001412 85.0
BYD3_k127_4030022_0 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006402 484.0
BYD3_k127_4030022_1 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004762 440.0
BYD3_k127_4030022_2 membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000007579 225.0
BYD3_k127_4032324_0 PFAM N-acetylmuramoyl-L-alanine amidase family 2 K03806 - 3.5.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000001249 262.0
BYD3_k127_4032324_1 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016436,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070042,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.193 0.0000000000000000000000000000000000000000000000000000000000000000005297 237.0
BYD3_k127_4032324_2 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K11928 - - 0.00000000000000000000000000000000000000000000000000000000000001019 234.0
BYD3_k127_4032324_3 Periplasmic binding protein K02016,K06858 - - 0.0000000000000000000000000000000000000000000000000000000000001328 224.0
BYD3_k127_4032324_4 Signal transducing histidine kinase, homodimeric domain K02487,K06596 - - 0.00000000000000000000000003479 109.0
BYD3_k127_4032324_5 6-O-methylguanine DNA methyltransferase, DNA binding domain K07443 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0005488,GO:0005515,GO:0019899,GO:0097159,GO:1901363 - 0.0000000000000000000000006105 121.0
BYD3_k127_4032324_6 CheW-like domain K06598 - - 0.000000000000000000001436 100.0
BYD3_k127_4040991_0 photoreceptor activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003477 260.0
BYD3_k127_4040991_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.000000000000000000000000000000000004329 144.0
BYD3_k127_4040991_2 Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000008117 114.0
BYD3_k127_4050554_0 ABC transporter substrate-binding protein K02035,K13889 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002749 470.0
BYD3_k127_4050554_1 Transposase proposed to express due to -1 translational frameshift at the sequence 5'-AAAAAC-3' - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004767 419.0
BYD3_k127_4063266_0 NMT1-like family K02051 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002566 505.0
BYD3_k127_4063266_1 Binding-protein-dependent transport system inner membrane component K02050,K15552,K15554 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003351 387.0
BYD3_k127_4063266_2 copper ion homeostasis K07152,K12818 - 3.6.4.13 0.00000000000000000000000000000000000000000000000000000000000001077 224.0
BYD3_k127_4063266_3 PFAM blue (type 1) copper domain protein - - - 0.00000000000000000000000000000000000000000001615 176.0
BYD3_k127_4063266_4 Major facilitator superfamily K16211 - - 0.000000000000000000000000000004891 120.0
BYD3_k127_4074960_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006195 317.0
BYD3_k127_4074960_1 Inner membrane protein involved in colicin E2 resistance K06143 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005821 316.0
BYD3_k127_4074960_2 Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide K07147 - - 0.00000000000000000000000000000000009187 138.0
BYD3_k127_4074960_3 thiolester hydrolase activity K06889 - - 0.000000000000000000000000000000007904 142.0
BYD3_k127_4081811_0 PhoQ Sensor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004213 466.0
BYD3_k127_4081811_1 Sugar (and other) transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002165 452.0
BYD3_k127_4081811_2 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005685 398.0
BYD3_k127_4099882_0 TIGRFAM malonyl CoA-acyl carrier protein transacylase K00645 - 2.3.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004766 355.0
BYD3_k127_4099882_1 PFAM Short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000001212 170.0
BYD3_k127_4099882_2 Rhomboid family - - - 0.0000000000000000000000000000008314 129.0
BYD3_k127_4099882_3 general secretion pathway protein G K02456 - - 0.000000000000000000000001106 106.0
BYD3_k127_4108947_0 von Willebrand factor, type A - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004589 398.0
BYD3_k127_4108947_1 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001013 390.0
BYD3_k127_4108947_2 Peptidase C14 caspase catalytic subunit p20 - - - 0.000000000000000000000000000000000000000000000000000000004085 214.0
BYD3_k127_4112990_0 sorbosone dehydrogenase - - - 2.618e-203 641.0
BYD3_k127_4112990_1 Threonine synthase K01733 - 4.2.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001432 376.0
BYD3_k127_4112990_2 TIGRFAM Thioredoxin K03672 - 1.8.1.8 0.0000000000000000000000000000000000000000000000009803 185.0
BYD3_k127_4112990_3 HxlR-like helix-turn-helix - - - 0.000000000000000000000000000000000001292 143.0
BYD3_k127_4112990_4 Hemerythrin HHE cation binding domain - - - 0.000000000000000000000003687 109.0
BYD3_k127_4120255_0 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP K02837 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005117 499.0
BYD3_k127_4120255_1 NAD-dependent epimerase dehydratase K00091 - 1.1.1.219 0.000000000000000000000000000000000000000000000000000006046 205.0
BYD3_k127_4120255_2 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 0.000000000000000000000000000000000000000000006752 181.0
BYD3_k127_4120255_3 Psort location Cytoplasmic, score - - - 0.00000000000000000000000000000285 136.0
BYD3_k127_4120255_4 methyltransferase K03183 - 2.1.1.163,2.1.1.201 0.0000000000000000000000000000179 126.0
BYD3_k127_4130606_0 Cystathionine beta-synthase K01697 - 4.2.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001524 530.0
BYD3_k127_4130606_1 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 GO:0003674,GO:0003676,GO:0003723,GO:0003747,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0016149,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000472 275.0
BYD3_k127_4130606_2 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814 - 2.4.1.129 0.00000000000000000000000000000000000000000000000000000000000000000000007063 248.0
BYD3_k127_4130606_3 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03767,K03768 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000009735 211.0
BYD3_k127_4130606_4 COG0179 2-keto-4-pentenoate hydratase 2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) K16171 - 3.7.1.2 0.00000000000000000000000000000000000006601 143.0
BYD3_k127_4130606_5 OmpA-like transmembrane domain - - - 0.00000000000000001102 92.0
BYD3_k127_4130707_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 5.086e-240 750.0
BYD3_k127_4130707_1 RmuC family K09760 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001608 421.0
BYD3_k127_4130707_2 Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine K12960 - 3.5.4.28,3.5.4.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005235 392.0
BYD3_k127_4130707_3 O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway K00568 - 2.1.1.222,2.1.1.64 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001512 295.0
BYD3_k127_4130707_4 Squalene phytoene synthase K02291 - 2.5.1.32,2.5.1.99 0.0000000000000000000000000000000004004 141.0
BYD3_k127_4193058_0 Cytochrome c - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000978 309.0
BYD3_k127_4193058_1 TonB dependent receptor K16090 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001188 287.0
BYD3_k127_4232286_0 Tyrosine phosphatase family K01104 - 3.1.3.48 0.00000000000000000000000000000000000003368 154.0
BYD3_k127_4232286_1 - - - - 0.000000005677 69.0
BYD3_k127_4232286_2 Bacterial protein of unknown function (DUF885) - - - 0.00000006821 57.0
BYD3_k127_4234219_0 TonB dependent biopolymer transporter integral cytoplasmic membrane subunit, working with ExbB K03559 - - 0.000000000000000000000000000000003996 132.0
BYD3_k127_4234219_1 COG1680 Beta-lactamase class C and other penicillin binding proteins - - - 0.0000000000008401 73.0
BYD3_k127_4234219_2 COG1680 Beta-lactamase class C and other penicillin binding - - - 0.00000000002181 68.0
BYD3_k127_4234895_0 Methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001811 282.0
BYD3_k127_4234895_1 Protein of unknown function (DUF3014) - - - 0.000000000000000000000000000000000000000000000000000000000002703 217.0
BYD3_k127_4237843_0 LytTr DNA-binding domain K02477 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001054 267.0
BYD3_k127_4237843_1 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000002781 230.0
BYD3_k127_4239417_0 Polysaccharide biosynthesis C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002994 518.0
BYD3_k127_4239417_1 Catalyzes the formation of malonyl-CoA from malonate and CoA K18661 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002796 421.0
BYD3_k127_4239417_2 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002431 385.0
BYD3_k127_4240961_0 PFAM ATPase family associated with various cellular activities (AAA) K03924 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005446 390.0
BYD3_k127_4240961_1 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002438 391.0
BYD3_k127_4240961_2 conserved protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.0000000000000000000000000000000000000000000000000000000000000000004084 240.0
BYD3_k127_4240961_3 Domain of unknown function (DUF3488) K22452 - 2.3.2.13 0.0000000000000000006516 93.0
BYD3_k127_42480_0 Type II secretion system K02653 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005224 464.0
BYD3_k127_42480_1 Protein of unknown function DUF72 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003339 392.0
BYD3_k127_42480_2 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001019 368.0
BYD3_k127_42480_3 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 - 2.7.1.24 0.000000000000000000000000000000000000000000000003544 189.0
BYD3_k127_42480_4 - - - - 0.000000000000000000000000000000000001087 156.0
BYD3_k127_42480_5 TIGRFAM HAD-superfamily hydrolase, subfamily IA, variant 3 - - - 0.00000000000004256 73.0
BYD3_k127_4253565_0 D-xylulose 5-phosphate D-fructose 6-phosphate phosphoketolase K01621 - 4.1.2.22,4.1.2.9 7.201e-248 773.0
BYD3_k127_4253565_1 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005736 435.0
BYD3_k127_4253565_2 Threonine dehydratase K01754 - 4.3.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005742 361.0
BYD3_k127_4253565_3 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000005498 175.0
BYD3_k127_4253565_4 PilZ domain - - - 0.0000000000000855 74.0
BYD3_k127_4255292_0 CHAT domain - - - 0.0000000000000000000000000000000000000004354 169.0
BYD3_k127_4255292_1 Adenylate cyclase - - - 0.000000000000000005625 96.0
BYD3_k127_4260107_0 Pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001154 286.0
BYD3_k127_4260107_1 Belongs to the UPF0234 family K09767 - - 0.000000000000000000000000000000000000000000000000000000006245 208.0
BYD3_k127_4260107_2 DNA photolyase K01669 - 4.1.99.3 0.0000000000000000000000000000000000000000000000004141 179.0
BYD3_k127_4263805_0 gluconolactonase activity K01053 - 3.1.1.17 0.000000000000000000000000000000000000000000000000000000000000000000007296 250.0
BYD3_k127_4263805_1 Mannose-6-phosphate isomerase K00971,K16011 - 2.7.7.13,5.3.1.8 0.0000000000000000000000000000000000000007929 162.0
BYD3_k127_4263805_2 Cupin 2, conserved barrel domain protein K11477 - - 0.0000000000000000000000000000000000003019 149.0
BYD3_k127_4263805_3 Predicted integral membrane protein (DUF2282) - - - 0.000000000000002679 81.0
BYD3_k127_4265947_0 alpha beta K06889 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000199 295.0
BYD3_k127_4265947_1 SnoaL-like domain - - - 0.0000000000000000000000000000000000000000000000000000000003529 207.0
BYD3_k127_4265947_2 - - - - 0.0000000000000000000000000000000000000000000000001196 193.0
BYD3_k127_4265947_3 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000000000000000000000000000000000006479 176.0
BYD3_k127_4265947_4 TonB dependent receptor - - - 0.00000000000000004403 81.0
BYD3_k127_4267181_0 and related enzymes K11159 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009616 513.0
BYD3_k127_4267181_1 AMP-binding enzyme K02182 - 6.2.1.48 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000635 452.0
BYD3_k127_4267181_2 Enoyl-CoA hydratase/isomerase - - - 0.00000000000000000000000000000000000000000000004266 179.0
BYD3_k127_4267181_3 SnoaL-like domain - - - 0.000000000000000000000000000001986 124.0
BYD3_k127_4267181_4 AMP-binding enzyme C-terminal domain - - - 0.00000000005293 64.0
BYD3_k127_4273950_0 AAA domain - - - 0.0000000000000000000000000000000000000000000000004407 187.0
BYD3_k127_4273950_1 Polysaccharide chain length determinant protein - - - 0.000000000001017 81.0
BYD3_k127_4273950_2 Protein conserved in bacteria - - - 0.0000006287 61.0
BYD3_k127_4273950_3 lysyltransferase activity - - - 0.0004335 47.0
BYD3_k127_4281112_0 Hydrophobe Amphiphile Efflux-1 (HAE1) Family K18138 - - 1.368e-309 969.0
BYD3_k127_4281112_1 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 - 6.1.1.20 5.953e-245 783.0
BYD3_k127_4281112_2 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 - 6.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001166 467.0
BYD3_k127_4281112_3 PFAM regulatory protein, MerR - - - 0.0000000000000000000000000000000000000000000000000000000002997 203.0
BYD3_k127_4281112_4 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K04764 GO:0000976,GO:0001067,GO:0001130,GO:0001216,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006355,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0032774,GO:0032991,GO:0032993,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0043565,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0046483,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1990837,GO:2000112,GO:2000113,GO:2001141 - 0.00000000000000000000000000000000000000000004645 161.0
BYD3_k127_4281112_5 transcriptional regulator - - - 0.0000000000000000000009046 103.0
BYD3_k127_4282157_0 PAS fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001709 336.0
BYD3_k127_4282157_1 helix_turn_helix, arabinose operon control protein - - - 0.0000000000000000000003605 98.0
BYD3_k127_4282439_0 Lactonase, 7-bladed beta-propeller - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001518 522.0
BYD3_k127_4282439_1 ATP-binding region ATPase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004834 304.0
BYD3_k127_4282439_2 Glutathione-dependent formaldehyde-activating enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001847 268.0
BYD3_k127_4282439_3 protein conserved in bacteria K09984 - - 0.0000000000000000000000000000000000004231 143.0
BYD3_k127_4286022_0 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K07277 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004407 412.0
BYD3_k127_4286022_1 zinc metalloprotease K11749 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001463 397.0
BYD3_k127_4294498_0 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation K00626 - 2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005891 517.0
BYD3_k127_4294498_1 Catalyzes the ferrous insertion into protoporphyrin IX K01772 GO:0003674,GO:0003824,GO:0004325,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.99.1.1,4.99.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001426 387.0
BYD3_k127_42963_0 small GTP-binding protein K02355 - - 4.984e-285 889.0
BYD3_k127_42963_1 Saccharopine dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001026 397.0
BYD3_k127_42963_2 cheY-homologous receiver domain - - - 0.000000000000000000000000000000000000000000002257 181.0
BYD3_k127_42963_3 alpha/beta hydrolase fold K07019 - - 0.00000000000000000000000000000000004645 148.0
BYD3_k127_4299595_0 Nitrate nitrite transporter K02575 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006825 466.0
BYD3_k127_4299595_1 response regulator, receiver K07684 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002667 310.0
BYD3_k127_4299595_2 histidine kinase, dimerisation and phosphoacceptor region K07673 - 2.7.13.3 0.0000000000000000000000000000000000000000002858 161.0
BYD3_k127_4300149_0 Tryptophanyl-tRNA synthetase K01867 - 6.1.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001085 584.0
BYD3_k127_4300149_1 Telomere recombination - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001008 285.0
BYD3_k127_4300149_2 probably involved in intracellular septation K06190 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000002734 182.0
BYD3_k127_4300149_3 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.000000000000000186 93.0
BYD3_k127_4309698_0 TIGRFAM Flagellar hook-associated protein 3 K02397 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001599 334.0
BYD3_k127_4309698_1 Belongs to the flagella basal body rod proteins family K02396 - - 0.0000000000000000000000000000000000007956 143.0
BYD3_k127_4309698_2 Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella K02406 - - 0.000000000000000000000000006809 110.0
BYD3_k127_4316362_0 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 1.01e-230 724.0
BYD3_k127_4316362_1 Glutamate-1-semialdehyde aminotransferase K01845 - 5.4.3.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001459 612.0
BYD3_k127_4316362_2 Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes K03651 - 3.1.4.53 0.00000000000000000000000000000000000000000000000000000002044 206.0
BYD3_k127_4316362_3 TraB family K09973 - - 0.0000000000000000000000000000000000000000000000000000001283 205.0
BYD3_k127_4316362_4 PFAM Rubredoxin-type Fe(Cys)4 protein - - - 0.000000000000000000000006286 102.0
BYD3_k127_4316362_5 - - - - 0.000000000000000000008748 98.0
BYD3_k127_432036_0 oxidase, subunit K00425 - 1.10.3.14 2.314e-202 639.0
BYD3_k127_432036_1 Spermidine putrescine ABC transporter substrate-binding protein K02055 GO:0005575,GO:0005623,GO:0006810,GO:0008150,GO:0008152,GO:0009058,GO:0009290,GO:0009292,GO:0009294,GO:0009987,GO:0015931,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0042618,GO:0042619,GO:0044464,GO:0044764,GO:0050657,GO:0051027,GO:0051179,GO:0051234,GO:0051704,GO:0071702,GO:0071704,GO:0071705,GO:0098657,GO:1901440,GO:1901441,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003381 606.0
BYD3_k127_432036_2 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K02052,K11072 - 3.6.3.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003496 418.0
BYD3_k127_432036_3 Spermidine putrescine ABC transporter permease K02054 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000004619 57.0
BYD3_k127_432036_4 oxidase, subunit II K00426 - 1.10.3.14 0.0000003069 60.0
BYD3_k127_4322939_0 COG1505 Serine proteases of the peptidase family S9A K01322 - 3.4.21.26 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003008 586.0
BYD3_k127_4322939_1 Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity K18778 GO:0000003,GO:0000910,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0007049,GO:0008150,GO:0009987,GO:0019954,GO:0022402,GO:0022414,GO:0032153,GO:0032505,GO:0042802,GO:0043093,GO:0044424,GO:0044444,GO:0044464,GO:0051301 - 0.0000000000000000000000000000000000009994 144.0
BYD3_k127_4322939_2 Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase K09862 GO:0003674,GO:0004857,GO:0005488,GO:0008150,GO:0008270,GO:0008657,GO:0010911,GO:0030234,GO:0032780,GO:0042030,GO:0043086,GO:0043167,GO:0043169,GO:0043462,GO:0044092,GO:0046872,GO:0046914,GO:0050790,GO:0051336,GO:0051346,GO:0060589,GO:0060590,GO:0065007,GO:0065009,GO:0072586,GO:0098772,GO:2000371,GO:2000372 - 0.00000000000001455 82.0
BYD3_k127_4324169_0 Sulfatase K01130 - 3.1.6.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002186 474.0
BYD3_k127_4324169_1 Beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006646 463.0
BYD3_k127_4324169_2 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001186 400.0
BYD3_k127_4324169_3 DNA-templated transcription, initiation K02405 - - 0.000000000000000000000000000000000000000000747 172.0
BYD3_k127_4324169_4 dipeptidyl-peptidase K01281 - 3.4.14.11 0.000000000000000000000000000000000000000002313 160.0
BYD3_k127_4324169_5 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses - - - 0.00000000000000000001051 108.0
BYD3_k127_4324169_6 NHL repeat - - - 0.000000000007896 76.0
BYD3_k127_4324169_7 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.0000006152 63.0
BYD3_k127_4324169_8 - - - - 0.0000007406 56.0
BYD3_k127_4324169_9 Belongs to the HpcH HpaI aldolase family K01644 - 4.1.3.34 0.0001414 46.0
BYD3_k127_4324462_0 membrane - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002298 572.0
BYD3_k127_4325028_0 TonB-dependent receptor plug K02014 - - 1.761e-212 674.0
BYD3_k127_4325028_1 Amino acid permease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009385 309.0
BYD3_k127_4326290_0 membrane-bound metal-dependent K01993,K07038 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002436 271.0
BYD3_k127_4326290_1 - - - - 0.0000000000000000000000000000000000000000000003077 171.0
BYD3_k127_4326290_2 D-alanyl-D-alanine carboxypeptidase K07260 - 3.4.17.14 0.00000000000000000000000000000000000006426 156.0
BYD3_k127_4326290_3 Cytochrome C' - - - 0.00000000000000000000000642 108.0
BYD3_k127_4326290_4 Domain of unknown function (DUF4342) - - - 0.00000000000000000001928 94.0
BYD3_k127_4326290_5 Domain of unknown function (DUF4136) - - - 0.000003041 56.0
BYD3_k127_4330400_0 protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004113 609.0
BYD3_k127_4330400_1 Outer membrane receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001501 559.0
BYD3_k127_4330400_2 ABC transporter substrate-binding protein K02027 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003868 426.0
BYD3_k127_4334072_0 Protein involved in meta-pathway of phenol degradation - - - 0.000000000000000000000000000000000000000000000000001328 192.0
BYD3_k127_4334072_1 Domain of unknown function (DUF4440) - - - 0.00000000000000000001236 102.0
BYD3_k127_4334602_0 Tetratricopeptide repeat - - - 2.541e-291 918.0
BYD3_k127_4357570_0 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008074 444.0
BYD3_k127_4357570_1 Sortase and related acyltransferases K03823 - 2.3.1.183 0.000000000000000000000000000000000000000000000000000000000000000000000000000001406 265.0
BYD3_k127_4357570_2 Protein tyrosine kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000959 227.0
BYD3_k127_4357570_3 ECF sigma factor - - - 0.00000000000000000000000000000000000000003317 167.0
BYD3_k127_4359737_0 thiamine-containing compound biosynthetic process K02051 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002579 600.0
BYD3_k127_4359737_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000134 225.0
BYD3_k127_4359737_2 ATPase family associated with various cellular activities (AAA) - - - 0.000000000000000000002547 94.0
BYD3_k127_4363920_0 Trehalose utilisation - - - 1.328e-219 698.0
BYD3_k127_4363920_1 Beta-lactamase - - - 2.702e-212 668.0
BYD3_k127_4363920_2 Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003734 413.0
BYD3_k127_4363920_3 Rhs family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001071 412.0
BYD3_k127_4363920_4 PFAM TonB-dependent Receptor K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001886 379.0
BYD3_k127_4363920_5 alpha/beta hydrolase fold - - - 0.000000000000000000000000000000000000000000000002862 183.0
BYD3_k127_4363920_6 Cupin - - - 0.000000000000000000000000000000000000000008892 159.0
BYD3_k127_4363920_7 bacterial-type flagellum-dependent cell motility - - - 0.00000000000000000000000000000003259 133.0
BYD3_k127_4363920_8 - - - - 0.000000000000000000000004032 116.0
BYD3_k127_4363920_9 NPCBM/NEW2 domain - - - 0.00000000002502 71.0
BYD3_k127_4391478_0 Beta-lactamase class C - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001524 306.0
BYD3_k127_4391478_1 Glyoxalase-like domain K08234 - - 0.000000000000000000000000000000000000000000000000000002353 195.0
BYD3_k127_4391478_2 Cytochrome P460 - - - 0.000000000000000000000000000009927 130.0
BYD3_k127_4403927_0 Protein of unknown function, DUF255 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005333 389.0
BYD3_k127_4403927_1 Domain of unknown function (DUF4252) - - - 0.000000000000000000000000000008137 125.0
BYD3_k127_4411494_0 Pathogenicity protein K09800 - - 1.15e-211 692.0
BYD3_k127_4411494_1 Acetylornithine deacetylase Succinyl-diaminopimelate - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001503 553.0
BYD3_k127_4411494_2 Ser Thr phosphatase family protein K07098 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001117 499.0
BYD3_k127_4411494_3 Aminoglycoside phosphotransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001374 317.0
BYD3_k127_4411494_4 helix_turn_helix, arabinose operon control protein K07506 - - 0.000000000000000000000000000000000000000000000000000002296 201.0
BYD3_k127_4411494_5 EF-hand, calcium binding motif - - - 0.000000000000000000005533 101.0
BYD3_k127_442434_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002832 441.0
BYD3_k127_4426695_0 Glycosyltransferase Family 4 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004339 368.0
BYD3_k127_4426695_1 Asparagine synthase, glutamine-hydrolyzing K01953 - 6.3.5.4 0.0000000000000000000000000000000000000000000000000000000000001481 216.0
BYD3_k127_4451342_0 FAD binding domain - - - 6.863e-237 743.0
BYD3_k127_4451342_1 PFAM Band 7 protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000114 400.0
BYD3_k127_4451342_2 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0016465,GO:0032991,GO:0044183,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051082,GO:0061077,GO:0101031,GO:1990220 - 0.000000000000000000000000000000000006106 138.0
BYD3_k127_4451342_3 containing von Willebrand factor type A (VWA) domain K07161 - - 0.00000000000000000000000000000001192 128.0
BYD3_k127_4451342_4 cellular response to DNA damage stimulus K07340 - - 0.0000000000004067 81.0
BYD3_k127_4456649_0 transcriptional regulator, araC family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001424 462.0
BYD3_k127_4456649_1 Peptidase, M28 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002154 372.0
BYD3_k127_4456649_2 methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001774 346.0
BYD3_k127_4456649_3 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K07303 - 1.3.99.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000059 267.0
BYD3_k127_4456649_4 helix_turn_helix ASNC type - - - 0.00000000000000000000000000004452 127.0
BYD3_k127_4465406_0 PFAM Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008433 601.0
BYD3_k127_4465406_1 Fatty acid desaturase K00507 - 1.14.19.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002925 392.0
BYD3_k127_4465406_2 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 - 3.2.2.23,4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005405 323.0
BYD3_k127_4465406_3 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 GO:0003674,GO:0003824,GO:0004595,GO:0005488,GO:0005515,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.7.3 0.0000000000000000000000000000000000000000000000000000007586 205.0
BYD3_k127_4465406_4 Specifically methylates the guanine in position 966 of 16S rRNA in the assembled 30S particle K08316 - 2.1.1.171 0.0000000000000000000000000000000000000000000000000007864 190.0
BYD3_k127_4476619_0 Belongs to the glycosyl hydrolase 3 family K05349 - 3.2.1.21 7.231e-295 917.0
BYD3_k127_4476619_1 Belongs to the glycosyl hydrolase 3 family K05349 - 3.2.1.21 0.000000000000000000000007006 103.0
BYD3_k127_4497758_0 spore germination K08978 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008329 501.0
BYD3_k127_4497758_1 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000769 437.0
BYD3_k127_4497758_2 Two component transcriptional regulator, winged helix family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004389 319.0
BYD3_k127_4497758_3 Outer membrane protein beta-barrel family - - - 0.0000000000000000000000000000000000000000001059 168.0
BYD3_k127_4497758_4 Peptidase propeptide and YPEB domain - - - 0.000000000000000000000003576 106.0
BYD3_k127_4499354_0 GTP-binding protein TypA K06207 - - 2.646e-290 901.0
BYD3_k127_4499354_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001241 263.0
BYD3_k127_4499354_2 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000004135 231.0
BYD3_k127_4499354_3 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.000000000000000000000000000001071 141.0
BYD3_k127_4512733_0 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 GO:0003674,GO:0003824,GO:0003896,GO:0003899,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006269,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0071704,GO:0090304,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005168 402.0
BYD3_k127_4512733_1 Yqey-like protein K09117 - - 0.0000000000000000000000000000000000000000000000004936 179.0
BYD3_k127_4512733_2 structural constituent of ribosome K02970 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:1990904 - 0.00000000003861 64.0
BYD3_k127_451407_0 siderophore transport K02014 - - 6.732e-227 728.0
BYD3_k127_451407_1 Cobalamin-independent synthase, Catalytic domain K00549 - 2.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000228 239.0
BYD3_k127_451407_2 Major facilitator superfamily K05819 - - 0.000000000000000000000000000000000000000000000000000000000009369 214.0
BYD3_k127_451530_0 KaiC K08482 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001146 284.0
BYD3_k127_451530_1 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.00000000000000000000000000000000000000000000000000000000000000000000006055 241.0
BYD3_k127_451530_2 Serine aminopeptidase, S33 K01055 - 3.1.1.24 0.000000000000000000000000000000000000000000000000000000000000001456 227.0
BYD3_k127_451530_3 Chromosomal replication initiator, DnaA K07491 - - 0.00000000000000000000000000000000000000000000000000000000008206 214.0
BYD3_k127_4527452_0 TIGRFAM ATP-dependent helicase HrpA K03578 - 3.6.4.13 7.247e-206 671.0
BYD3_k127_4529548_0 binds to the 23S rRNA K02939 - - 0.000000000000000000000000000000000000000000000000000001972 194.0
BYD3_k127_4529548_1 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 - - 0.0000000000000000000000000000008755 121.0
BYD3_k127_4529548_2 membrane - - - 0.000000000000000218 90.0
BYD3_k127_4549409_0 Specifically methylates the 50S ribosomal protein L3 on a specific glutamine residue K07320 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006304,GO:0006305,GO:0006306,GO:0006464,GO:0006479,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008757,GO:0009007,GO:0009008,GO:0009987,GO:0016740,GO:0016741,GO:0018364,GO:0019538,GO:0032259,GO:0032775,GO:0034641,GO:0036009,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0044728,GO:0046483,GO:0071704,GO:0090304,GO:0140096,GO:0140097,GO:1901360,GO:1901564 2.1.1.298 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005249 327.0
BYD3_k127_4549409_1 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000001273 261.0
BYD3_k127_4549409_2 PFAM electron transport protein SCO1 SenC K07152 - - 0.0000000000000000000000000000000000000000004393 168.0
BYD3_k127_4549409_3 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 GO:0003674,GO:0003824,GO:0004609,GO:0006629,GO:0006644,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0019637,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0071704,GO:0090407,GO:1901576 4.1.1.65 0.000000000000000000000000003764 115.0
BYD3_k127_4559486_0 PFAM Integrase catalytic region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009221 601.0
BYD3_k127_4559486_1 HTH-like domain K07497 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001455 268.0
BYD3_k127_4559486_2 Transposase - - - 0.00000000000000000000000000000000000000009053 153.0
BYD3_k127_4559486_3 Evidence 2b Function of strongly homologous gene - - - 0.00002161 46.0
BYD3_k127_4561183_0 Chemotaxis protein histidine kinase and related kinases K02487,K06596 - - 0.00000000000000000000000000000000000000000000000000000000000000004031 254.0
BYD3_k127_4563639_0 Protein tyrosine kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003372 542.0
BYD3_k127_4563639_1 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 - 4.3.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007282 496.0
BYD3_k127_4563639_2 Phospholipase D Active site motif K06131 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001187 279.0
BYD3_k127_4563639_3 Alpha beta hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002789 267.0
BYD3_k127_4564932_0 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 2.247e-222 713.0
BYD3_k127_4564932_1 Arginyl-tRNA synthetase K01887 GO:0003674,GO:0003824,GO:0004812,GO:0004814,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006420,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.19 0.0000000000000000000008118 97.0
BYD3_k127_4574868_0 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004781 384.0
BYD3_k127_4574868_1 PFAM AMP-dependent synthetase and ligase - - - 0.0000000000000000000000000000000000000000000000000000000000000001533 223.0
BYD3_k127_4574868_2 Domain of unknown function (DUF5009) - - - 0.000000000000000000000000000003046 121.0
BYD3_k127_4583534_0 TIGRFAM 4-hydroxybenzoate 3-monooxygenase K00481 GO:0000166,GO:0003674,GO:0003824,GO:0004497,GO:0005488,GO:0008150,GO:0008152,GO:0016491,GO:0016705,GO:0016709,GO:0018659,GO:0036094,GO:0043167,GO:0043168,GO:0048037,GO:0050660,GO:0050662,GO:0055114,GO:0071949,GO:0097159,GO:1901265,GO:1901363 1.14.13.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001234 523.0
BYD3_k127_4583534_1 alpha/beta hydrolase fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004332 466.0
BYD3_k127_4583534_2 Isoprenylcysteine carboxyl methyltransferase (ICMT) family K21310 - 2.1.1.334 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007328 297.0
BYD3_k127_4583534_3 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000000000000000000000000000004308 242.0
BYD3_k127_4583534_4 helix_turn_helix, arabinose operon control protein K18954 - - 0.0000000000000000000000000000000000000000000000000000000000003593 228.0
BYD3_k127_4583534_5 Glyoxalase-like domain K01759 - 4.4.1.5 0.000000000000000000000000000000000000000000000000002041 185.0
BYD3_k127_4583534_6 - - - - 0.000000000000000000000000000000000000000000000000002053 200.0
BYD3_k127_4583534_7 - - - - 0.0000000000000000000000000000000000000000000008858 171.0
BYD3_k127_4584704_0 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002862 527.0
BYD3_k127_4584704_1 HflC and HflK could encode or regulate a protease K04088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002299 346.0
BYD3_k127_4584704_2 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 - 6.3.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002555 269.0
BYD3_k127_4584704_3 HflC and HflK could regulate a protease K04087 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000006836 267.0
BYD3_k127_4584704_4 RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs K03666 - - 0.00000000000000000000000000000000001071 136.0
BYD3_k127_4584704_5 Uncharacterized protein conserved in bacteria (DUF2065) K09937 - - 0.000000000004695 67.0
BYD3_k127_4588634_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 5.048e-237 746.0
BYD3_k127_4588634_1 Belongs to the Nudix hydrolase family K03574 - 3.6.1.55 0.000000000000000000000000000000000004055 140.0
BYD3_k127_4588634_2 CAAX protease self-immunity K07052 - - 0.00000000000000000000000000002218 136.0
BYD3_k127_4588634_3 beta-lactamase activity K04771,K07126 - 3.4.21.107 0.000000000000000000000177 108.0
BYD3_k127_4606038_0 Cysteine-rich domain - - - 1.128e-200 636.0
BYD3_k127_4606038_1 Protein of unknown function (DUF3501) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002151 270.0
BYD3_k127_4606038_2 PFAM Rubrerythrin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003254 263.0
BYD3_k127_4606038_3 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0004529,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006308,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008855,GO:0009056,GO:0009057,GO:0009318,GO:0009987,GO:0016787,GO:0016788,GO:0016796,GO:0016895,GO:0019439,GO:0032991,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901361,GO:1901575,GO:1902494 3.1.11.6 0.000000000000000001656 90.0
BYD3_k127_4607214_0 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000116 349.0
BYD3_k127_4607214_1 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002515 327.0
BYD3_k127_4607214_2 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001228 258.0
BYD3_k127_4607214_3 Belongs to the universal ribosomal protein uS2 family K02967 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0004311 48.0
BYD3_k127_4612844_0 Protein kinase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003214 321.0
BYD3_k127_4612844_1 Probable zinc-ribbon domain - - - 0.00000000000000000000000000000000001292 143.0
BYD3_k127_4624593_0 FeS assembly SUF system protein SufT - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002606 257.0
BYD3_k127_4624593_1 Rieske-like [2Fe-2S] domain K05710,K18087 - - 0.0000000000000000000000000000002338 125.0
BYD3_k127_4624593_2 phosphohistidine phosphatase, SixA K08296 - - 0.00000000000000000000000000001997 122.0
BYD3_k127_4624593_3 SUF system FeS assembly protein K04488 - - 0.0000000000000000000000008672 105.0
BYD3_k127_4627750_0 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004698 403.0
BYD3_k127_4627750_1 Belongs to the peptidase S11 family K07258 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000446 396.0
BYD3_k127_4627750_2 PFAM Aminotransferase, class IV K00824 - 2.6.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002977 291.0
BYD3_k127_4627750_3 Lytic murein transglycosylase K08305 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000558 304.0
BYD3_k127_4627750_4 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.00000000000000000000000000000000000000000000000000000000000000000088 236.0
BYD3_k127_4627750_5 Catalyzes cross-linking of the peptidoglycan cell wall K05515 GO:0000270,GO:0003674,GO:0003824,GO:0004180,GO:0004185,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006022,GO:0006023,GO:0006024,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0008238,GO:0008360,GO:0008658,GO:0009002,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016020,GO:0016021,GO:0016043,GO:0016787,GO:0017171,GO:0019538,GO:0022603,GO:0022604,GO:0030203,GO:0031224,GO:0031226,GO:0031406,GO:0033218,GO:0033293,GO:0034645,GO:0036094,GO:0042221,GO:0042493,GO:0042546,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044425,GO:0044459,GO:0044464,GO:0045229,GO:0046677,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051128,GO:0065007,GO:0065008,GO:0070008,GO:0070011,GO:0070589,GO:0071554,GO:0071555,GO:0071704,GO:0071840,GO:0071944,GO:0071972,GO:0097159,GO:0140096,GO:1901135,GO:1901137,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901681 3.4.16.4 0.0000000000000000000000001425 109.0
BYD3_k127_4627750_6 Belongs to the UPF0250 family K09158 - - 0.0000000000000000000002352 100.0
BYD3_k127_4627750_7 COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductases K00344 - 1.6.5.5 0.000000002091 60.0
BYD3_k127_463694_0 Polysaccharide chain length determinant protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001037 379.0
BYD3_k127_463694_1 polysaccharide deacetylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009727 355.0
BYD3_k127_463694_2 COG0457 FOG TPR repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000005201 259.0
BYD3_k127_463694_3 Polysaccharide biosynthesis/export protein K01991 - - 0.000000000000000000000000000000000000000000000000000000002734 209.0
BYD3_k127_463694_4 AAA domain - - - 0.0000000000000000000000000000000000000000000000000009858 196.0
BYD3_k127_463694_5 - - - - 0.0000000000000000000000002563 121.0
BYD3_k127_463694_6 Transmembrane exosortase (Exosortase_EpsH) - - - 0.000003388 55.0
BYD3_k127_4642126_0 Transcriptional regulator K05372 - - 0.00000000000000000000000000000000002956 139.0
BYD3_k127_4642126_1 TRANSCRIPTIONal - - - 0.00000000000000000000000000007318 118.0
BYD3_k127_4642126_2 - - - - 0.0000000000000000000000000002316 120.0
BYD3_k127_4642126_3 peptidase activity - - - 0.00002069 51.0
BYD3_k127_4643296_0 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000356 229.0
BYD3_k127_4643296_1 PFAM DoxX family protein K15977 - - 0.000000000000000000000000000000000000000000002288 168.0
BYD3_k127_4643296_2 Belongs to the low molecular weight phosphotyrosine protein phosphatase family K01104,K03325,K03741,K03892,K18701 - 1.20.4.1,2.8.4.2,3.1.3.48 0.0000000000000000000000002719 110.0
BYD3_k127_4649646_0 Beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005337 543.0
BYD3_k127_4649646_1 Flavodoxin-like fold K19784 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006805,GO:0008150,GO:0008152,GO:0009410,GO:0009987,GO:0010181,GO:0016491,GO:0016645,GO:0016646,GO:0032553,GO:0036094,GO:0042221,GO:0043167,GO:0043168,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0048037,GO:0050662,GO:0050896,GO:0051716,GO:0052873,GO:0055114,GO:0070887,GO:0071466,GO:0097159,GO:0097367,GO:1901265,GO:1901363 - 0.000000000000000000000000000000000000000000000000000000000000001573 224.0
BYD3_k127_4649646_2 Transcriptional regulator GntR family - - - 0.000000000000000000000000000000000000005839 154.0
BYD3_k127_4650628_0 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002386 583.0
BYD3_k127_4650628_1 FeS assembly protein SufD K09015 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001885 326.0
BYD3_k127_4650628_2 NifU-like N terminal domain K04488 - - 0.000000000000000000000000000000000194 136.0
BYD3_k127_4650628_3 FeS assembly ATPase SufC K09013 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006790,GO:0008150,GO:0008152,GO:0009314,GO:0009628,GO:0009987,GO:0016043,GO:0016226,GO:0022607,GO:0031163,GO:0044085,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051186,GO:0071840 - 0.00000003061 54.0
BYD3_k127_4656693_0 Bacterial extracellular solute-binding protein K02055 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002029 400.0
BYD3_k127_4656693_1 Binding-protein-dependent transport system inner membrane component K02054 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002146 392.0
BYD3_k127_4656693_2 Belongs to the ABC transporter superfamily K02052 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001407 381.0
BYD3_k127_4656693_3 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs K05825 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000233 268.0
BYD3_k127_4656693_4 Binding-protein-dependent transport system inner membrane component K02053 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000119 267.0
BYD3_k127_4656693_5 esterase - - - 0.0000000000000000000000000000000000000000000000000000000001119 215.0
BYD3_k127_4656693_6 - - - - 0.0000000000000000000000000000000000000000000000000000002161 203.0
BYD3_k127_4657668_0 Sulfatase-modifying factor enzyme 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005298 442.0
BYD3_k127_4657668_1 Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway K00852 - 2.7.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006106 391.0
BYD3_k127_4657668_2 COG1629 Outer membrane receptor proteins, mostly Fe transport K02014 - - 0.000000006705 57.0
BYD3_k127_4665957_0 COG0790 FOG TPR repeat, SEL1 subfamily K07126 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002335 392.0
BYD3_k127_4665957_1 Autotransporter beta-domain - - - 0.000000003032 63.0
BYD3_k127_4674786_0 TIGRFAM cytochrome c oxidase accessory protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002941 565.0
BYD3_k127_4674786_1 C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex K00406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001957 331.0
BYD3_k127_4674786_2 COG2993 Cbb3-type cytochrome oxidase, cytochrome c subunit K00405 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006436 300.0
BYD3_k127_4674786_3 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01533 - 3.6.3.4 0.000000000009747 68.0
BYD3_k127_4674786_4 Cytochrome C and Quinol oxidase polypeptide I K00404 - 1.9.3.1 0.00000288 49.0
BYD3_k127_4674786_5 - - - - 0.00004407 50.0
BYD3_k127_4674786_6 Cbb3-type cytochrome oxidase component FixQ K00407 - - 0.0000868 53.0
BYD3_k127_4685983_0 Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02401 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006781 346.0
BYD3_k127_4685983_1 Role in flagellar biosynthesis K02421 - - 0.00000000000000000000000000000000000000000000000000001463 194.0
BYD3_k127_4686410_0 WD40-like Beta Propeller Repeat - - - 7.272e-291 915.0
BYD3_k127_4686410_1 amino acid K03294,K03759 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000009808 258.0
BYD3_k127_4711582_0 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001106 609.0
BYD3_k127_4711582_1 Putative 2OG-Fe(II) oxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000009888 236.0
BYD3_k127_4711582_2 Glutathione S-transferase, N-terminal domain - - - 0.000000000000000000000002101 104.0
BYD3_k127_4711582_3 Transposase IS200 like K07491 - - 0.000008413 53.0
BYD3_k127_4715671_0 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009475 574.0
BYD3_k127_4715671_1 TonB dependent receptor - - - 0.00002397 49.0
BYD3_k127_4720618_0 DNA-binding domain of Proline dehydrogenase K13821 - 1.2.1.88,1.5.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002106 311.0
BYD3_k127_4720618_1 PFAM Thioredoxin K05838 - - 0.00000000000000000000000000000000000000000000002775 176.0
BYD3_k127_4723981_0 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000000000000000000001102 231.0
BYD3_k127_4723981_1 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction K00925 - 2.7.2.1 0.000000000000000000000000000000000000000000000000000000000005327 213.0
BYD3_k127_4723981_2 Histidine kinase K02482 - 2.7.13.3 0.00000000000000000000000000000000003532 151.0
BYD3_k127_4723981_3 Domain in cystathionine beta-synthase and other proteins. - - - 0.000000000000000000000000000001198 127.0
BYD3_k127_4723981_4 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000000000000002894 112.0
BYD3_k127_4723981_5 Prokaryotic dksA/traR C4-type zinc finger - - - 0.0000000000001837 75.0
BYD3_k127_4723981_6 Protein of unknown function (DUF2934) - - - 0.000007195 53.0
BYD3_k127_4753455_0 protein conserved in bacteria - - - 4.533e-236 744.0
BYD3_k127_4753455_1 Belongs to the DapA family K21062 - 3.5.4.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008118 464.0
BYD3_k127_4753455_2 belongs to the aldehyde dehydrogenase family K00128,K22187 - 1.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007441 374.0
BYD3_k127_4753455_3 Amidohydrolase family - - - 0.0000000857 53.0
BYD3_k127_4753649_0 PFAM Pyrrolo-quinoline quinone K00114 - 1.1.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003222 480.0
BYD3_k127_4753649_1 SMART extracellular solute-binding protein, family 3 - - - 0.000000000000000000000000000000000000000000000000009834 184.0
BYD3_k127_4753649_2 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000000000000000000000000000000000000002874 166.0
BYD3_k127_4762960_0 long-chain fatty acid transport protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007574 586.0
BYD3_k127_4770959_0 Glycosyl transferase family 21 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001738 616.0
BYD3_k127_4770959_1 Outer membrane protein beta-barrel domain - - - 0.00000001393 68.0
BYD3_k127_4771393_0 Peptidase M56, BlaR1 - - - 0.000000000000000000000000000000194 141.0
BYD3_k127_4771393_1 Penicillinase repressor - - - 0.00001542 50.0
BYD3_k127_4816512_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008518 398.0
BYD3_k127_4816512_1 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 - 2.5.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003476 336.0
BYD3_k127_4816512_2 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 0.0000000000000000000000000000000000000000000000000000000000000003014 228.0
BYD3_k127_4837123_0 Salmonella virulence plasmid 65kDa B protein - - - 0.000000000000000000000000000000000000000000000000000000000000000195 254.0
BYD3_k127_4837123_1 serine-type endopeptidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000007427 243.0
BYD3_k127_4837123_2 Belongs to the ompA family K20276 - - 0.000001235 63.0
BYD3_k127_4837123_3 Regulator of ribonuclease activity B - - - 0.0009893 51.0
BYD3_k127_486797_0 Male sterility protein - - - 1.417e-194 620.0
BYD3_k127_486797_1 AMP-binding enzyme C-terminal domain K01895 - 6.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000003784 247.0
BYD3_k127_4872555_0 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005804 349.0
BYD3_k127_4872555_1 Protein tyrosine kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004326 292.0
BYD3_k127_4872555_2 Acyl-CoA thioesterase K10805 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006163,GO:0006629,GO:0006631,GO:0006637,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009062,GO:0009117,GO:0009150,GO:0009259,GO:0009987,GO:0016042,GO:0016054,GO:0016289,GO:0016787,GO:0016788,GO:0016790,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0033865,GO:0033875,GO:0034032,GO:0034641,GO:0035383,GO:0042802,GO:0043436,GO:0043603,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046395,GO:0046483,GO:0047617,GO:0051186,GO:0055086,GO:0071704,GO:0072329,GO:0072521,GO:1901135,GO:1901360,GO:1901564,GO:1901575 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001528 272.0
BYD3_k127_4872555_3 Belongs to the pseudouridine synthase RsuA family K06178,K06181 - 5.4.99.20,5.4.99.22 0.000000000000000000000000000000000000000004003 161.0
BYD3_k127_4872555_4 response regulator K02479,K07684 - - 0.00000000000000000000000000000000000000001513 163.0
BYD3_k127_4872555_5 Tetratricopeptide repeat - - - 0.00000000000006935 84.0
BYD3_k127_4874016_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003189 533.0
BYD3_k127_4874016_1 PFAM AAA domain (dynein-related subfamily) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007381 378.0
BYD3_k127_4874016_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000263 265.0
BYD3_k127_4875195_0 oxidoreductase - - - 6.393e-216 692.0
BYD3_k127_4875195_1 Transcriptional regulator K13633 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007815 377.0
BYD3_k127_4875195_2 Belongs to the aspartate glutamate racemases family K01779 - 5.1.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001927 364.0
BYD3_k127_4875195_3 Dehydrogenase - - - 0.0000000000000000000000000000000004359 130.0
BYD3_k127_4875195_4 Histidine phosphatase superfamily (branch 1) - - - 0.0000000000001395 80.0
BYD3_k127_4879765_0 response regulator K07712 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007474 482.0
BYD3_k127_4879765_1 signal transduction histidine kinase K07708 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009013 335.0
BYD3_k127_4883792_0 TonB-dependent siderophore receptor K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001295 501.0
BYD3_k127_4883792_1 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000002201 221.0
BYD3_k127_4884832_0 PFAM L-carnitine dehydratase bile acid-inducible protein F K07749 - 2.8.3.16 0.000000000000000000000000000000000000000000000000000000000000000000000000001215 258.0
BYD3_k127_4884832_1 Isochorismatase family K13995 - 3.5.1.107 0.00000000000000000000000000000000000000000000000000000000003957 220.0
BYD3_k127_4884832_2 TonB-dependent receptor K02014 - - 0.000000000000000000000000000000000000000000000008603 181.0
BYD3_k127_4890955_0 Transmembrane exosortase (Exosortase_EpsH) - - - 0.000000000000000000000000000000000000002279 164.0
BYD3_k127_4890955_1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K02481 - - 0.000000000000000001759 87.0
BYD3_k127_4896784_0 protein conserved in bacteria - - - 5.231e-221 694.0
BYD3_k127_4896784_1 cation diffusion facilitator family transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001744 428.0
BYD3_k127_4896784_2 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003601 300.0
BYD3_k127_4896784_3 Bacterial protein of unknown function (DUF937) - - - 0.000000000000000000000000001247 117.0
BYD3_k127_4899795_0 FtsX-like permease family K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004155 559.0
BYD3_k127_4899795_1 ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component K02003 - - 0.0000000000000000000000000000000000000000000000007736 177.0
BYD3_k127_4900265_0 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002185 361.0
BYD3_k127_4909519_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K18303 - - 5.226e-301 939.0
BYD3_k127_4909519_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000000000000000000000000000000000000000000000000293 205.0
BYD3_k127_4910206_0 Transport of potassium into the cell K03549 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001778 617.0
BYD3_k127_4910206_1 Sigma-70 region 2 K03088 - - 0.000000000000000000000000004251 118.0
BYD3_k127_4910206_2 Glucokinase K00845 - 2.7.1.2 0.0000000000000000000006961 96.0
BYD3_k127_4910206_4 ABC-type multidrug transport system ATPase component - - - 0.00005403 47.0
BYD3_k127_4910206_5 Putative zinc-finger - - - 0.0008503 49.0
BYD3_k127_4910657_0 Beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000144 298.0
BYD3_k127_4910657_1 Amidohydrolase K07045 - - 0.000000000000000000000000000001387 132.0
BYD3_k127_4920305_0 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000498 346.0
BYD3_k127_4920305_1 Belongs to the arylamine N-acetyltransferase family K00675 - 2.3.1.118 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002873 319.0
BYD3_k127_4924450_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005488 361.0
BYD3_k127_4924450_1 PFAM Cupin 2 conserved barrel domain protein - - - 0.0000000000000000000000000000000000000000000000004757 179.0
BYD3_k127_4924450_2 helix_turn_helix, arabinose operon control protein - - - 0.0000000000000000000000000000000000001044 148.0
BYD3_k127_4926716_0 Alanine-glyoxylate amino-transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001608 512.0
BYD3_k127_4926716_1 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.00000000000000000000000000000000000000000000007762 174.0
BYD3_k127_4926716_2 PFAM Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000009665 160.0
BYD3_k127_4926716_3 lysyltransferase activity - - - 0.0000000000000000000000000002892 127.0
BYD3_k127_4926716_4 polysaccharide deacetylase - - - 0.0000000000002324 78.0
BYD3_k127_4929430_0 PFAM metallophosphoesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002124 302.0
BYD3_k127_4929430_1 COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002527 262.0
BYD3_k127_4929430_2 Hemerythrin HHE cation binding domain - - - 0.00000000000000000000000000000000000000000000000000797 196.0
BYD3_k127_4929430_3 Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase - - - 0.0000000000000000000000000009582 115.0
BYD3_k127_4929430_4 Domain of unknown function (DUF3597) - - - 0.00000000001179 71.0
BYD3_k127_4929430_5 Protein of unknown function (DUF2934) - - - 0.000002324 57.0
BYD3_k127_4934190_0 Cation transporter/ATPase, N-terminus K01537 - 3.6.3.8 1.067e-226 728.0
BYD3_k127_4934190_1 2-oxoacid dehydrogenases acyltransferase (catalytic domain) K00627 - 2.3.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009362 344.0
BYD3_k127_4934190_2 Pyruvate dehydrogenase K00162 - 1.2.4.1 0.000000000000000000000000000000000000002511 148.0
BYD3_k127_4934190_3 redox protein, regulator of disulfide bond formation - - - 0.0000000000000000000000000000000005617 138.0
BYD3_k127_4934190_4 universal stress protein K14055 - - 0.00000000000002516 80.0
BYD3_k127_4934190_5 Phosphopantetheine attachment site - - - 0.0000000000006524 72.0
BYD3_k127_4934457_0 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000009396 261.0
BYD3_k127_4934457_1 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000004893 244.0
BYD3_k127_4934457_2 integral membrane protein K02221 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000002914 121.0
BYD3_k127_4934457_3 PFAM Type II secretion system protein E K02669 - - 0.000000000000000000000000002303 111.0
BYD3_k127_4939597_0 Crp-like helix-turn-helix domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001128 351.0
BYD3_k127_4939597_1 FAD-dependent pyridine nucleotide-disulphide oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004508 281.0
BYD3_k127_4939597_2 Sortase family K07284 - 3.4.22.70 0.00000000000000000000000000000000003706 142.0
BYD3_k127_4939597_3 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol K06131 - - 0.000000000000000000000000000001427 132.0
BYD3_k127_4939597_4 Domain of unknown function (DUF892) - - - 0.00000000000000000000000007843 114.0
BYD3_k127_4939597_6 Domain of unknown function (DUF4398) - - - 0.00000000000000005273 89.0
BYD3_k127_4939597_7 - - - - 0.0000008087 61.0
BYD3_k127_4952665_0 Glycosyl hydrolase 36 superfamily, catalytic domain K13688 - - 0.0 1010.0
BYD3_k127_4964479_0 COG2346, Truncated hemoglobins K06886 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001611 281.0
BYD3_k127_4964479_1 Sulfatase-modifying factor enzyme 1 - - - 0.0000000715 55.0
BYD3_k127_4971263_0 Outer membrane receptor K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001704 554.0
BYD3_k127_4971263_1 HxlR-like helix-turn-helix - - - 0.000000000000000000000000000009792 123.0
BYD3_k127_497476_0 Carboxylesterase family K03929 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004748 453.0
BYD3_k127_497476_1 PKD domain containing protein K01179,K07004,K13277,K20276,K21449 GO:0005575,GO:0005618,GO:0005623,GO:0030312,GO:0044464,GO:0071944 3.2.1.4 0.000000000006319 74.0
BYD3_k127_4976990_0 Predicted metal-dependent hydrolase K07044 - - 0.000000000000000000000000000000000000000000000000000000000000000001499 233.0
BYD3_k127_4976990_1 TonB-dependent Receptor Plug Domain K02014 - - 0.000000000000000000000000000000000000000000000000000000000004296 214.0
BYD3_k127_4976990_2 TIGRFAM TonB family protein K03832 - - 0.000000000000000000001859 103.0
BYD3_k127_4989001_0 Ankyrin repeats (3 copies) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001768 310.0
BYD3_k127_4989001_1 domain, Protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005497 251.0
BYD3_k127_4989001_2 Transcriptional regulator, Crp Fnr family - - - 0.0000000000000000000000000000000000000000000000000000000000000000004043 238.0
BYD3_k127_4989001_3 Phosphoglycerate mutase - - - 0.0000000000000000000000000000000000005484 147.0
BYD3_k127_4989001_4 PFAM response regulator receiver - - - 0.00000000000000000000001013 105.0
BYD3_k127_4997158_0 PQQ-like domain K05889 - 1.1.2.6 6.846e-196 631.0
BYD3_k127_4997158_1 Peptidase dimerisation domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000024 560.0
BYD3_k127_4997158_2 NADP oxidoreductase coenzyme F420-dependent K06988 - 1.5.1.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000009647 269.0
BYD3_k127_4997158_3 LysE type translocator - - - 0.000000000000000000000000000000000000000000000000000000001961 207.0
BYD3_k127_4997158_4 Glycine zipper - - - 0.000000000000000000000000000000000000000000000000000002097 199.0
BYD3_k127_4997158_5 Phosphorylase superfamily K01243 - 3.2.2.9 0.0000000000000000000000000000000000000000000000000001591 192.0
BYD3_k127_4997158_6 cationic amino acid transporter K13866,K13871 - - 0.0000000000000000000000000000000000000002817 151.0
BYD3_k127_4997158_7 competence protein - - - 0.00000001736 66.0
BYD3_k127_4997158_8 Outer membrane receptor K02014 - - 0.00000002815 55.0
BYD3_k127_4998110_0 4-hydroxyphenylacetate 3-hydroxylase C terminal K00483 - 1.14.14.9 6.32e-221 699.0
BYD3_k127_4998110_1 PFAM TonB-dependent Receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000221 619.0
BYD3_k127_4998110_2 Amidase K02433 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003079 481.0
BYD3_k127_4998110_3 Protein of unknown function (DUF2848) - - - 0.000000000000000000000000000000000000000000000000000000000000000000001373 248.0
BYD3_k127_4998110_4 Flavin reductase like domain - - - 0.0000000000000000000000000000000000000000000000001003 183.0
BYD3_k127_4998110_5 Cupin 2, conserved barrel domain protein - - - 0.00000000000000000000000000000000009142 138.0
BYD3_k127_4998110_6 MarR family - - - 0.00000000000000000000000000000002969 130.0
BYD3_k127_4998110_7 Cupin - - - 0.0000000000000000000006226 105.0
BYD3_k127_5008167_0 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems, periplasmic components K15576,K22067 - - 6.594e-204 641.0
BYD3_k127_5008167_1 TIGRFAM nitrate ABC transporter, ATPase subunits C and D K02049,K15578 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001408 400.0
BYD3_k127_5008167_2 Nitrate ABC transporter inner membrane subunit K15577 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001513 395.0
BYD3_k127_5008167_3 transcriptional regulator K02529 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006413 390.0
BYD3_k127_5008167_4 ABC-type nitrate sulfonate bicarbonate transport K15576,K22067 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002187 375.0
BYD3_k127_5008167_5 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008539 344.0
BYD3_k127_5008167_6 response regulator K07183 - - 0.000000000000000000000000000000000000000000000000000000000000002047 221.0
BYD3_k127_5008167_7 Tryptophan halogenase - - - 0.000000000000000000000000000000000000000000000000000002184 192.0
BYD3_k127_5011350_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 5e-324 1002.0
BYD3_k127_5011350_1 belongs to the aldehyde dehydrogenase family K00130 - 1.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004631 504.0
BYD3_k127_5011350_10 D-aminoacylase domain protein K01465,K06015 - 3.5.1.81,3.5.2.3 0.000000000000000000000000000000000000000000000000000000000000004329 227.0
BYD3_k127_5011350_11 PFAM Beta-lactamase - - - 0.000000000000000000000000000000000000000000000000001617 198.0
BYD3_k127_5011350_12 PFAM Beta-lactamase - - - 0.000000000000000000000000000000000000000000000000002076 197.0
BYD3_k127_5011350_13 membrane transporter protein K07090 - - 0.00000000000000000000000000000000000000000000000004874 193.0
BYD3_k127_5011350_14 HpcH/HpaI aldolase/citrate lyase family - - - 0.00000000000000000000000000000000000471 156.0
BYD3_k127_5011350_15 Putative phosphatase (DUF442) - - - 0.000000000000000000000000000000000008104 148.0
BYD3_k127_5011350_16 Selenocysteine synthase (Seryl-tRNASer selenium transferase) K01042 - 2.9.1.1 0.0000000000000000000000000000000000136 151.0
BYD3_k127_5011350_17 transcriptional regulator - - - 0.0000000000000000000005019 104.0
BYD3_k127_5011350_18 Endoribonuclease L-PSP - - - 0.0000000000000000002404 93.0
BYD3_k127_5011350_19 calcium ion binding - GO:0000137,GO:0002790,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005783,GO:0005789,GO:0005794,GO:0005795,GO:0005829,GO:0006807,GO:0006810,GO:0008104,GO:0008150,GO:0008152,GO:0009306,GO:0009889,GO:0009987,GO:0010556,GO:0010559,GO:0012505,GO:0015031,GO:0015833,GO:0016020,GO:0019222,GO:0019538,GO:0031323,GO:0031326,GO:0031974,GO:0031981,GO:0031984,GO:0031985,GO:0032940,GO:0033036,GO:0042175,GO:0042886,GO:0042984,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044238,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044431,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0046903,GO:0050789,GO:0050794,GO:0051171,GO:0051179,GO:0051234,GO:0051246,GO:0060255,GO:0065007,GO:0070013,GO:0071702,GO:0071704,GO:0071705,GO:0080090,GO:0098791,GO:0098827,GO:1901564,GO:1903018,GO:2000112 - 0.000009392 54.0
BYD3_k127_5011350_2 COG1629 Outer membrane receptor proteins, mostly Fe transport - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002909 460.0
BYD3_k127_5011350_3 amino acid K03294 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002395 408.0
BYD3_k127_5011350_4 ferric reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001049 381.0
BYD3_k127_5011350_5 peptidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003487 377.0
BYD3_k127_5011350_6 Peptidase family M28 K06016 - 3.5.1.6,3.5.1.87 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001203 374.0
BYD3_k127_5011350_7 Carboxylesterase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002497 297.0
BYD3_k127_5011350_8 Domain of unknown function (DUF1989) K09967 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001659 249.0
BYD3_k127_5011350_9 phosphatidylethanolamine-binding protein K06910 - - 0.00000000000000000000000000000000000000000000000000000000000000000002402 236.0
BYD3_k127_5017190_0 Ferredoxin--NADP reductase K00384 - 1.8.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002514 419.0
BYD3_k127_5017190_1 COG0155 Sulfite reductase, beta subunit (hemoprotein) K00381 - 1.8.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002486 303.0
BYD3_k127_5017190_2 Haemolysin secretion/activation protein ShlB/FhaC/HecB - - - 0.00000000000000000000003265 114.0
BYD3_k127_5031232_0 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 - 2.5.1.6 2.665e-203 638.0
BYD3_k127_5031232_1 PFAM pfkB family carbohydrate kinase K00856 - 2.7.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000646 454.0
BYD3_k127_5031232_2 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 - 3.3.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000004016 263.0
BYD3_k127_5031232_3 AMP-binding enzyme C-terminal domain K18661 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000803 250.0
BYD3_k127_5031232_4 Histidine kinase K07315 - 3.1.3.3 0.000000000000000000000000000000000000000000000945 179.0
BYD3_k127_5039178_0 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003974 347.0
BYD3_k127_5039178_1 Belongs to the UPF0312 family - - - 0.00000000000000000000000000005948 123.0
BYD3_k127_5039178_2 Amidohydrolase K07045 - - 0.0000000004224 61.0
BYD3_k127_5039178_3 ArsC family K00537 - 1.20.4.1 0.000000001106 61.0
BYD3_k127_5045017_0 NADH-quinone oxidoreductase K00336 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003284 376.0
BYD3_k127_5045017_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000003022 235.0
BYD3_k127_5046987_0 COG1137 ABC-type (unclassified) transport system, ATPase component K06861 GO:0003674,GO:0003824,GO:0005215,GO:0005319,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006869,GO:0008150,GO:0010876,GO:0015221,GO:0015399,GO:0015405,GO:0015437,GO:0015920,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0031224,GO:0032991,GO:0033036,GO:0034040,GO:0042623,GO:0042626,GO:0043190,GO:0043492,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944,GO:0098533,GO:0098796,GO:0098797,GO:1901264,GO:1901505,GO:1902494,GO:1902495,GO:1904949,GO:1990351 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001269 349.0
BYD3_k127_5046987_1 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03092 GO:0000976,GO:0001067,GO:0001130,GO:0001216,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005515,GO:0005575,GO:0006355,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0019219,GO:0019222,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032991,GO:0032993,GO:0042802,GO:0043565,GO:0044212,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902680,GO:1903506,GO:1903508,GO:1990837,GO:2000112,GO:2001141 - 0.000000000000000000000000000000000000000000000000009488 191.0
BYD3_k127_5046987_2 Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate K03270 GO:0000271,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0006629,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0008781,GO:0009058,GO:0009059,GO:0009103,GO:0009987,GO:0016051,GO:0016311,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0016791,GO:0019143,GO:0033692,GO:0034637,GO:0034645,GO:0042578,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0070567,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 3.1.3.45 0.0000000000000000000000000000000005312 134.0
BYD3_k127_5046987_3 Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane K09774 - - 0.000002505 57.0
BYD3_k127_5055344_0 Transmembrane secretion effector K08225 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000463 426.0
BYD3_k127_5055344_1 PFAM transposase, mutator K07493 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004528 320.0
BYD3_k127_5055344_2 Histone methylation protein DOT1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002462 250.0
BYD3_k127_5055344_3 lytic transglycosylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000005383 257.0
BYD3_k127_5055344_4 Histidine kinase K02480 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000008473 226.0
BYD3_k127_5055344_5 - - - - 0.000000000000000000000000000000000000000000000000000000008236 205.0
BYD3_k127_5055344_6 DnaJ-class molecular chaperone K05516 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0097159,GO:1901363 - 0.000000000000000000000000000000000000000000005326 164.0
BYD3_k127_5055344_7 Thioesterase domain - - - 0.00000000000000000000000000000002206 134.0
BYD3_k127_5055344_8 - - - - 0.000000000000001269 83.0
BYD3_k127_5056927_0 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001297 521.0
BYD3_k127_5056927_1 Belongs to the peptidase S33 family K01259 - 3.4.11.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001208 484.0
BYD3_k127_5056927_2 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002204 346.0
BYD3_k127_5056927_3 - - - - 0.00000000000000000000000000000000000000000000000000000004325 204.0
BYD3_k127_5056927_4 phosphorelay signal transduction system - - - 0.0000000000000000000000000000000000002367 147.0
BYD3_k127_5056927_5 EamA-like transporter family - - - 0.000000000000000000000000001858 126.0
BYD3_k127_5056927_6 COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain - - - 0.00007521 51.0
BYD3_k127_509587_0 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0006725,GO:0006732,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009030,GO:0009058,GO:0009108,GO:0009110,GO:0009228,GO:0009229,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0017076,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0035639,GO:0036094,GO:0042357,GO:0042364,GO:0042723,GO:0042724,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046483,GO:0046872,GO:0051186,GO:0051188,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.7.4.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001217 289.0
BYD3_k127_509587_1 Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG) K01095 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006629,GO:0006644,GO:0006650,GO:0006655,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0008962,GO:0009058,GO:0009987,GO:0010035,GO:0010038,GO:0016020,GO:0016021,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019637,GO:0030258,GO:0031224,GO:0031226,GO:0032026,GO:0042221,GO:0042577,GO:0042578,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044425,GO:0044459,GO:0044464,GO:0045017,GO:0046471,GO:0046474,GO:0046486,GO:0046839,GO:0050896,GO:0071704,GO:0071944,GO:0090407,GO:1901576 3.1.3.27 0.0000000000000000000000000000000000000000000000000005356 189.0
BYD3_k127_509587_2 Protein tyrosine kinase - - - 0.000000000000000004119 87.0
BYD3_k127_5096072_0 TIGRFAM conserved repeat domain - - - 0.0000000000000000000000000000000000000000000000000000000004866 214.0
BYD3_k127_5096072_1 SdrD B-like domain - - - 0.000000000000000000000000000000000000000000000000001335 200.0
BYD3_k127_5104684_0 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle K01595 GO:0003674,GO:0003824,GO:0004611,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008964,GO:0016829,GO:0016830,GO:0016831,GO:0044424,GO:0044444,GO:0044464 4.1.1.31 1.425e-218 705.0
BYD3_k127_5104684_1 helix_turn_helix ASNC type - - - 0.00000000000000000000000000000000000000000007359 164.0
BYD3_k127_5104847_0 molybdopterin cofactor binding K08352 - 1.8.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001807 549.0
BYD3_k127_5104847_1 thiosulfate sulfurtransferase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005437 415.0
BYD3_k127_5104847_2 4 iron, 4 sulfur cluster binding K04014,K08353,K08358,K16293 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0008150,GO:0008152,GO:0016491,GO:0016661,GO:0016662,GO:0030288,GO:0030313,GO:0031975,GO:0042279,GO:0042597,GO:0044464,GO:0055114,GO:0098809 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005457 295.0
BYD3_k127_5104847_3 Polysulphide reductase, NrfD - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005328 298.0
BYD3_k127_5104847_4 Bacterial regulatory protein, arsR family K03892 - - 0.000000000000000000000002649 107.0
BYD3_k127_5104847_5 PFAM cytochrome c, class I K08738 - - 0.00000000002898 73.0
BYD3_k127_5116852_0 Aldolase K01623 - 4.1.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001015 380.0
BYD3_k127_5116852_1 Carboxyl transferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001255 254.0
BYD3_k127_5157536_0 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family - - - 4.303e-213 670.0
BYD3_k127_5157536_1 glyoxalase bleomycin resistance protein dioxygenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004018 302.0
BYD3_k127_5157536_2 Ferritin-like domain K04047 - - 0.0000000000000000000000000000000000000000000000000000000000000000004134 239.0
BYD3_k127_5157536_3 Cytochrome P460 - - - 0.000000000000000000000000000000000000000000001085 171.0
BYD3_k127_5157536_4 - - - - 0.000002344 59.0
BYD3_k127_5160091_0 Tripartite tricarboxylate transporter TctA family K07793 - - 2.2e-228 716.0
BYD3_k127_5160091_1 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001983 483.0
BYD3_k127_5160091_2 peptidylprolyl isomerase K03769 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000226 263.0
BYD3_k127_5160091_3 probably involved in intracellular septation K06190 - - 0.000000000000000000000000000000000000000000000000006281 184.0
BYD3_k127_5160091_4 Tripartite tricarboxylate transporter TctB family - - - 0.000000000000000000000000000009181 126.0
BYD3_k127_5160091_5 Belongs to the BolA IbaG family K05527 - - 0.000000000000000000000977 104.0
BYD3_k127_5200622_0 Sugar phosphate permease K02445 - - 5.763e-212 669.0
BYD3_k127_5204578_0 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 2.728e-194 624.0
BYD3_k127_5204578_1 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K18979 GO:0003674,GO:0003824,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0016491,GO:0018130,GO:0019438,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0052693,GO:0055086,GO:0055114,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 1.17.99.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002899 508.0
BYD3_k127_5204578_2 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008562 468.0
BYD3_k127_5204578_3 N-acetylmuramoyl-L-alanine amidase K01448 GO:0000003,GO:0000910,GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0007049,GO:0008150,GO:0008745,GO:0009987,GO:0016787,GO:0016810,GO:0016811,GO:0019954,GO:0022402,GO:0022414,GO:0030288,GO:0030313,GO:0031975,GO:0032505,GO:0042597,GO:0043093,GO:0044464,GO:0051301,GO:0061783 3.5.1.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001585 370.0
BYD3_k127_5204578_4 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005035 333.0
BYD3_k127_5204578_5 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.5.1.75 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002368 318.0
BYD3_k127_5204578_6 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 - 6.3.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001256 320.0
BYD3_k127_5204578_7 ATPase or kinase K06925 GO:0000166,GO:0002949,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043531,GO:0044237,GO:0044238,GO:0046483,GO:0070525,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901363 - 0.0000000000000000000000000000000008969 138.0
BYD3_k127_5204578_8 RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs K03666 GO:0003674,GO:0003676,GO:0003677,GO:0003681,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006378,GO:0006396,GO:0006397,GO:0006417,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0010629,GO:0016043,GO:0016070,GO:0016071,GO:0016246,GO:0016441,GO:0016458,GO:0017148,GO:0019222,GO:0022607,GO:0022613,GO:0022618,GO:0030423,GO:0031047,GO:0031123,GO:0031124,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0032268,GO:0032269,GO:0032270,GO:0034248,GO:0034249,GO:0034250,GO:0034622,GO:0034641,GO:0035194,GO:0040029,GO:0040033,GO:0043170,GO:0043631,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0045727,GO:0045974,GO:0045975,GO:0046483,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051173,GO:0051246,GO:0051247,GO:0051248,GO:0060255,GO:0065003,GO:0065007,GO:0071704,GO:0071826,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:2000112,GO:2000113 - 0.000000000000001529 76.0
BYD3_k127_5206931_0 Belongs to the UPF0229 family K09786 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003349 385.0
BYD3_k127_5206931_1 SpoVR like protein K06415 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007297 340.0
BYD3_k127_5206931_2 PrkA AAA domain K07180 - - 0.0000000000174 64.0
BYD3_k127_5207710_0 Belongs to the enoyl-CoA hydratase isomerase family K01782 - 1.1.1.35,4.2.1.17,5.1.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002117 554.0
BYD3_k127_5207710_1 PFAM amidohydrolase 2 K07045 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001955 467.0
BYD3_k127_5208247_0 Domain of unknown function (DUF1611_N) Rossmann-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003714 470.0
BYD3_k127_5208247_1 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain K19802 - 5.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003806 363.0
BYD3_k127_5208247_2 Beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000001553 207.0
BYD3_k127_5208879_0 COG0729 Outer membrane protein K07278 - - 0.00000000000000000000000000000000000000000000000000000000000003884 228.0
BYD3_k127_5208879_1 TamB, inner membrane protein subunit of TAM complex K09800 - - 0.0000000000000000000000000000000000000000000000000609 203.0
BYD3_k127_5209367_0 Cys/Met metabolism PLP-dependent enzyme K01739 - 2.5.1.48 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001257 332.0
BYD3_k127_5209367_1 Belongs to the AB hydrolase superfamily. MetX family K00641 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004414,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008374,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009069,GO:0009086,GO:0009092,GO:0009987,GO:0016053,GO:0016407,GO:0016413,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.3.1.31 0.000000000000000000000000000000000000000000000000000000000000000000007644 248.0
BYD3_k127_5210328_0 alpha-glucosidase K01187 - 3.2.1.20 2.998e-250 780.0
BYD3_k127_5212398_0 PFAM metal-dependent phosphohydrolase, HD sub domain - - - 0.0000000000000000000000000000000000000000000000000000000000000002496 232.0
BYD3_k127_5212398_1 HEAT repeats - - - 0.0000000008932 69.0
BYD3_k127_5213874_0 Sugar (and other) transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000426 302.0
BYD3_k127_5213874_1 methyltransferase - - - 0.0000000000000000000000000000000000000000000000000001883 194.0
BYD3_k127_5219828_0 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001537 333.0
BYD3_k127_5219828_1 Domain of unknown function (DUF1963) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002809 297.0
BYD3_k127_5219828_2 helix_turn_helix, arabinose operon control protein - - - 0.00000000001919 75.0
BYD3_k127_5219828_3 - - - - 0.0000002655 59.0
BYD3_k127_5219828_5 FK506 binding protein 4 K06269,K09571,K12487 GO:0000003,GO:0000041,GO:0000166,GO:0000413,GO:0001655,GO:0001882,GO:0001883,GO:0003006,GO:0003008,GO:0003674,GO:0003755,GO:0003824,GO:0005102,GO:0005488,GO:0005515,GO:0005524,GO:0005525,GO:0005527,GO:0005528,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0005886,GO:0006457,GO:0006463,GO:0006464,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006825,GO:0007154,GO:0007165,GO:0007275,GO:0007399,GO:0007422,GO:0007548,GO:0007565,GO:0007566,GO:0007600,GO:0007601,GO:0008092,GO:0008134,GO:0008144,GO:0008150,GO:0008152,GO:0009314,GO:0009416,GO:0009581,GO:0009582,GO:0009583,GO:0009584,GO:0009605,GO:0009628,GO:0009719,GO:0009725,GO:0009755,GO:0009987,GO:0010033,GO:0010639,GO:0010721,GO:0010959,GO:0010975,GO:0010977,GO:0014070,GO:0016020,GO:0016027,GO:0016028,GO:0016043,GO:0016853,GO:0016859,GO:0017076,GO:0018193,GO:0018208,GO:0019001,GO:0019538,GO:0019897,GO:0019898,GO:0022008,GO:0022414,GO:0022607,GO:0023052,GO:0030001,GO:0030154,GO:0030424,GO:0030426,GO:0030427,GO:0030518,GO:0030521,GO:0030522,GO:0030554,GO:0030674,GO:0030850,GO:0031072,GO:0031110,GO:0031111,GO:0031113,GO:0031115,GO:0031333,GO:0031344,GO:0031345,GO:0031503,GO:0031974,GO:0031981,GO:0032271,GO:0032272,GO:0032501,GO:0032502,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032559,GO:0032561,GO:0032767,GO:0032870,GO:0032879,GO:0032886,GO:0032991,GO:0033043,GO:0033267,GO:0033993,GO:0034622,GO:0035257,GO:0035258,GO:0035259,GO:0035639,GO:0036094,GO:0036211,GO:0036477,GO:0042221,GO:0042995,GO:0043005,GO:0043025,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043254,GO:0043269,GO:0043401,GO:0043412,GO:0043933,GO:0044085,GO:0044087,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044295,GO:0044297,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044444,GO:0044446,GO:0044459,GO:0044463,GO:0044464,GO:0044703,GO:0044706,GO:0045595,GO:0045596,GO:0045664,GO:0045665,GO:0046661,GO:0048156,GO:0048471,GO:0048513,GO:0048519,GO:0048523,GO:0048545,GO:0048583,GO:0048608,GO:0048699,GO:0048731,GO:0048732,GO:0048856,GO:0048869,GO:0050767,GO:0050768,GO:0050789,GO:0050793,GO:0050794,GO:0050877,GO:0050896,GO:0050906,GO:0050908,GO:0050953,GO:0050962,GO:0051049,GO:0051093,GO:0051128,GO:0051129,GO:0051179,GO:0051219,GO:0051234,GO:0051239,GO:0051241,GO:0051427,GO:0051493,GO:0051494,GO:0051606,GO:0051704,GO:0051716,GO:0051879,GO:0051924,GO:0051960,GO:0051961,GO:0060090,GO:0060284,GO:0061077,GO:0061458,GO:0065003,GO:0065007,GO:0070013,GO:0070507,GO:0070887,GO:0071310,GO:0071383,GO:0071396,GO:0071407,GO:0071495,GO:0071704,GO:0071840,GO:0071944,GO:0080134,GO:0080135,GO:0097159,GO:0097367,GO:0097458,GO:0098796,GO:0098797,GO:0120025,GO:0120035,GO:0120038,GO:0140096,GO:0150034,GO:1900034,GO:1901265,GO:1901363,GO:1901564,GO:1902903,GO:1902904,GO:2000026 3.1.3.16,5.2.1.8 0.0003508 50.0
BYD3_k127_5224221_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006836 547.0
BYD3_k127_5224221_1 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006 306.0
BYD3_k127_5224221_2 PFAM Integral membrane protein TerC K05794 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001271 297.0
BYD3_k127_5224221_3 TIGRFAM preprotein translocase, YajC subunit K03210 - - 0.00000001835 55.0
BYD3_k127_5230960_0 TIGRFAM acetyl-CoA carboxylase, biotin carboxylase K01961 - 6.3.4.14,6.4.1.2 6.425e-230 718.0
BYD3_k127_5230960_1 Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps K04084 - 1.8.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001297 613.0
BYD3_k127_5230960_2 Ribosomal protein L11 methyltransferase K02687 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003796 287.0
BYD3_k127_5230960_3 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05540 GO:0002943,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009314,GO:0009451,GO:0009628,GO:0009987,GO:0010467,GO:0016070,GO:0016491,GO:0016627,GO:0017150,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0050896,GO:0055114,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 - 0.00000000000000000000000000000000000000000000000000000000000000000000000001773 252.0
BYD3_k127_5230960_4 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.0000000000000000000000000000000000000000000000000000000000886 207.0
BYD3_k127_5230960_5 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 GO:0003674,GO:0003824,GO:0003989,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009305,GO:0009987,GO:0016049,GO:0016053,GO:0016421,GO:0016874,GO:0016885,GO:0019538,GO:0019752,GO:0032787,GO:0036211,GO:0040007,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:0072330,GO:1901564,GO:1901576 - 0.000000000000000000000000000000000000000000000191 179.0
BYD3_k127_5230960_6 protein involved in tolerance to divalent cations K03926 - - 0.0000000000000000000000000000000003531 134.0
BYD3_k127_5230960_7 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 - - 0.000000000000000000000000000000109 124.0
BYD3_k127_5230960_8 Thioredoxin-like - - - 0.0000000000000000000000000000002098 131.0
BYD3_k127_5230960_9 Protein of unknown function (DUF3426) - - - 0.00000000000000002776 93.0
BYD3_k127_5233536_0 RmlD substrate binding domain K21271,K22320 - 1.1.1.394,1.1.1.412 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002454 344.0
BYD3_k127_5233536_1 Major facilitator superfamily K08151 - - 0.00000000000000000000000000000000000001913 150.0
BYD3_k127_5233536_2 Rieske (2fe-2S) K00499 - 1.14.15.7 0.00000000000000000000000000008768 118.0
BYD3_k127_5252020_0 EVE domain - - - 0.0000000000000000000000000000000000000000000000000000001047 205.0
BYD3_k127_5252020_1 Belongs to the 5-formyltetrahydrofolate cyclo-ligase family K01934 - 6.3.3.2 0.0000000000000000000000000000000000003043 148.0
BYD3_k127_5252020_2 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.00000000000000000000004192 104.0
BYD3_k127_5254766_0 Serine dehydratase K01752 - 4.3.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003072 495.0
BYD3_k127_5254766_1 ThiF family K03148,K21029,K21147 - 2.7.7.73,2.7.7.80,2.8.1.11 0.00000000000000000000000000000000000000001031 159.0
BYD3_k127_5254766_2 membrane - - - 0.00000000000000000000000000000006337 128.0
BYD3_k127_5273405_0 Beta-propeller repeat - - - 0.000000000000000000000000000000000000002437 155.0
BYD3_k127_5273405_1 zinc-ribbon domain - - - 0.0001352 52.0
BYD3_k127_5282477_0 dioxygenase K11159 - - 7.13e-246 766.0
BYD3_k127_5282477_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005104 308.0
BYD3_k127_5282477_2 - - - - 0.00000000000000000000000000000000000000000000003216 177.0
BYD3_k127_5282477_3 - - - - 0.000000000000000000000000000000002672 132.0
BYD3_k127_5282477_4 Limonene-1,2-epoxide hydrolase catalytic domain K10533 - 3.3.2.8 0.000000000000000000000000000003099 123.0
BYD3_k127_5296851_0 Tellurite resistance protein TerB - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009505 349.0
BYD3_k127_5296851_1 Belongs to the SOS response-associated peptidase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005381 304.0
BYD3_k127_5296851_2 LytTr DNA-binding domain - - - 0.0000000000000000000000000000000000000000000000000003298 192.0
BYD3_k127_5296851_3 enterobactin catabolic process - - - 0.000000000000000000000000000000001773 129.0
BYD3_k127_5301040_0 DJ-1/PfpI family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005538 316.0
BYD3_k127_5301040_1 Protein of unknown function (DUF3750) - - - 0.000000000000000000000000000000000000000000000000000000000000000001983 231.0
BYD3_k127_5301040_2 NIPSNAP - - - 0.0000000000000000000000000000000000000000000000000000000000009389 218.0
BYD3_k127_5313968_0 Putative diguanylate phosphodiesterase - - - 0.000000000000000000000000000000000000000000000000000000000000007403 224.0
BYD3_k127_5313968_1 Histidine kinase - - - 0.0000000000000000000000000000000000000000005408 167.0
BYD3_k127_5318631_0 Acyl-coenzyme A synthetases AMP-(fatty) acid ligases K08295 - 6.2.1.32 4.657e-203 645.0
BYD3_k127_5318631_1 Catalyzes the retro-aldol cleavage of 4-hydroxy-2- oxopentanoate to pyruvate and acetaldehyde. Is involved in the meta-cleavage pathway for the degradation of aromatic compounds K01666 - 4.1.3.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006081 415.0
BYD3_k127_5318631_2 Catalyzes the conversion of acetaldehyde to acetyl-CoA, using NAD( ) and coenzyme A. Is the final enzyme in the meta- cleavage pathway for the degradation of aromatic compounds K04073 GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0008774,GO:0016491,GO:0016620,GO:0016903,GO:0055114 1.2.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001593 397.0
BYD3_k127_5318631_3 Monogalactosyldiacylglycerol (MGDG) synthase K03429 - 2.4.1.315 0.0000000000000000000000000000000000000000000000000004399 203.0
BYD3_k127_5318631_4 Polysaccharide deacetylase - - - 0.000000000000000000000000000000000000000000000001225 192.0
BYD3_k127_5318631_5 Catalyzes the retro-aldol cleavage of 4-hydroxy-2- oxopentanoate to pyruvate and acetaldehyde. Is involved in the meta-cleavage pathway for the degradation of aromatic compounds K01666,K18365 - 4.1.3.39,4.1.3.43 0.000000000000000000000000000000000000000000155 160.0
BYD3_k127_5318631_6 Histone methylation protein DOT1 - - - 0.00000000000000000000001047 110.0
BYD3_k127_5318631_7 polysaccharide deacetylase - - - 0.000000000000000001366 93.0
BYD3_k127_5336870_0 Biotin-lipoyl like K02005 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008594 332.0
BYD3_k127_5336870_1 Outer membrane efflux protein - - - 0.000000000000000000000000009627 112.0
BYD3_k127_5343523_0 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001211 407.0
BYD3_k127_5343523_1 Protein of unknown function, DUF255 - - - 0.0000000000000000000000000000000000000000000000000000000004922 209.0
BYD3_k127_5343523_2 Acyl-CoA dehydrogenase, middle domain - - - 0.0000000000000000000000000000000000000000000000008805 176.0
BYD3_k127_5343523_3 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000000000000000000000000000000003766 170.0
BYD3_k127_5343523_4 - - - - 0.00000000000001189 77.0
BYD3_k127_5351956_0 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001806 486.0
BYD3_k127_5351956_1 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009249,GO:0009987,GO:0010467,GO:0018065,GO:0018193,GO:0018205,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0051604,GO:0071704,GO:1901564 2.3.1.181 0.00000000000000000000000000000000000000000000000000000000000000000000000000000011 272.0
BYD3_k127_5351956_2 MotA TolQ ExbB proton channel K03561 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005798 254.0
BYD3_k127_5351956_3 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.000000000000000000000000000000000000000000000000000000000000000007892 241.0
BYD3_k127_5351956_4 Biopolymer transport protein ExbD/TolR - - - 0.00000000000000000000000000000000000000000000000001238 183.0
BYD3_k127_5351956_5 PFAM Biopolymer transport protein ExbD TolR K03559 - - 0.000000000000000000000000000000000000000005342 158.0
BYD3_k127_5359950_0 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 6.515e-209 657.0
BYD3_k127_5359950_1 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) K03183 GO:0003674,GO:0003824,GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0008150,GO:0008152,GO:0008168,GO:0008169,GO:0008425,GO:0008757,GO:0009058,GO:0009108,GO:0009233,GO:0009234,GO:0009987,GO:0016740,GO:0016741,GO:0030580,GO:0032259,GO:0042180,GO:0042181,GO:0043333,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0051186,GO:0051188,GO:0071704,GO:1901576,GO:1901661,GO:1901663 2.1.1.163,2.1.1.201 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000773 360.0
BYD3_k127_5359950_2 Protein of unknown function (DUF971) - - - 0.00000000000000000000000000000000000000006626 170.0
BYD3_k127_5359950_3 Sterol-binding domain protein K03690 - - 0.0000000000000000000000000104 122.0
BYD3_k127_5359950_4 Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis K03688 - - 0.0000001288 54.0
BYD3_k127_5375835_0 PFAM lipolytic protein G-D-S-L family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001343 331.0
BYD3_k127_5375835_1 ECF sigma factor - - - 0.0000000000000000000000000000000000000000000000000004338 192.0
BYD3_k127_5375835_2 Amidohydrolase family - - - 0.0000000000000000000000000000000001935 142.0
BYD3_k127_5375835_3 amine dehydrogenase activity - - - 0.000000000000000000000000000000168 139.0
BYD3_k127_5386641_0 DNA polymerase III alpha subunit K02337 - 2.7.7.7 1.964e-302 945.0
BYD3_k127_5386641_1 COG2814 Arabinose efflux permease K18567 - - 0.0008684 44.0
BYD3_k127_538756_0 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005909 502.0
BYD3_k127_538756_1 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) K00991 - 2.7.7.60 0.00000000000000000000000000000000000000000000000000000000000000004282 231.0
BYD3_k127_538756_2 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770 - 4.6.1.12 0.0000000000000000000000000000000000000000000000000000000000006103 219.0
BYD3_k127_538756_3 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic K05589 - - 0.00000000000000000000003646 106.0
BYD3_k127_538756_4 Responsible for synthesis of pseudouridine from uracil- 13 in transfer RNAs K06176 - 5.4.99.27 0.00000000000000000005522 96.0
BYD3_k127_5395677_0 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 GO:0002097,GO:0002099,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008270,GO:0008479,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0034404,GO:0034470,GO:0034641,GO:0034654,GO:0034660,GO:0042455,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046116,GO:0046483,GO:0046872,GO:0046914,GO:0055086,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.2.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005073 441.0
BYD3_k127_5395677_1 Domain of unknown function DUF21 K03699 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001472 389.0
BYD3_k127_5395677_2 AI-2E family transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002996 363.0
BYD3_k127_5395677_3 Preprotein translocase, YajC subunit K03210 - - 0.00000000000000000000000000001829 125.0
BYD3_k127_5402544_0 Pyridine nucleotide-disulphide oxidoreductase, dimerisation K00322 - 1.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006093 527.0
BYD3_k127_5402544_1 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008217 359.0
BYD3_k127_5402544_2 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.00000000000000000000000000000000000000000000000000000000000000000005846 243.0
BYD3_k127_5402544_3 Oxidoreductase molybdopterin binding - - - 0.0000000000000000000000000000000000000000000000000001015 195.0
BYD3_k127_5402544_4 CAAX protease self-immunity K07052 - - 0.0000000000000000000000000000000000000000000000004481 190.0
BYD3_k127_5402544_5 helix_turn_helix, arabinose operon control protein K07506 - - 0.0000000000000000000000000000000004814 143.0
BYD3_k127_5402544_6 receptor - - - 0.0000000000000000001602 90.0
BYD3_k127_5414290_0 TIGRFAM conserved repeat domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002296 369.0
BYD3_k127_5422680_0 Belongs to the short-chain dehydrogenases reductases (SDR) family K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002394 330.0
BYD3_k127_5422680_1 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001344 293.0
BYD3_k127_5422680_2 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S K00311 GO:0003674,GO:0003824,GO:0004174,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005759,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016491,GO:0016645,GO:0016649,GO:0016722,GO:0017133,GO:0019866,GO:0022900,GO:0022904,GO:0031090,GO:0031224,GO:0031300,GO:0031301,GO:0031304,GO:0031305,GO:0031966,GO:0031967,GO:0031974,GO:0031975,GO:0032592,GO:0032991,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043783,GO:0044237,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0045251,GO:0045333,GO:0048037,GO:0048038,GO:0048039,GO:0051536,GO:0051539,GO:0051540,GO:0055114,GO:0070013,GO:0098573,GO:0098798,GO:1902494,GO:1990204 1.5.5.1 0.000000000000000000000000000000000000000000000000000000000000007593 222.0
BYD3_k127_5422680_3 enoyl-CoA hydratase K13766 - 4.2.1.18 0.000000000000000000000000000000000000000000000000004382 185.0
BYD3_k127_5424095_0 PFAM Histone deacetylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009518 446.0
BYD3_k127_5424095_1 Domain of unknown function (DUF1611_N) Rossmann-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001783 392.0
BYD3_k127_5424095_2 A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit contributes ATPase, 3'-5' helicase, exonuclease activity and loads RecA onto ssDNA K03582 - 3.1.11.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000883 321.0
BYD3_k127_5424095_3 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004686 273.0
BYD3_k127_5424095_4 helix_turn_helix ASNC type - - - 0.0000000000000000000000000000000000000000000006336 171.0
BYD3_k127_5424095_5 - - - - 0.0000000000000000000000000000137 125.0
BYD3_k127_5424095_6 Tricorn protease homolog - - - 0.00000000000001531 74.0
BYD3_k127_5425836_0 MatE - - - 4.428e-244 762.0
BYD3_k127_5425836_1 SnoaL-like polyketide cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004154 256.0
BYD3_k127_5425836_2 PFAM NADH flavin oxidoreductase NADH oxidase K10680 - - 0.000000000000000000001002 96.0
BYD3_k127_5441943_0 Oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009006 488.0
BYD3_k127_5441943_1 AP endonuclease family 2 C terminus - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001476 458.0
BYD3_k127_5441943_2 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000007048 228.0
BYD3_k127_545112_0 peptidyl-tyrosine sulfation - - - 7.68e-211 662.0
BYD3_k127_545112_1 Antibiotic biosynthesis monooxygenase K06996 - - 0.000000000000000000000000000000003651 147.0
BYD3_k127_5480744_0 COG1228 Imidazolonepropionase and related amidohydrolases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003124 578.0
BYD3_k127_5480744_1 GGDEF domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008104 466.0
BYD3_k127_5480744_11 - - - - 0.00000002173 59.0
BYD3_k127_5480744_12 Acetyltransferase (GNAT) domain - - - 0.0000001474 61.0
BYD3_k127_5480744_2 alpha/beta hydrolase fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000303 427.0
BYD3_k127_5480744_3 Tetrapyrrole (Corrin/Porphyrin) Methylases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008725 393.0
BYD3_k127_5480744_4 Belongs to the UPF0276 family K09930 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002096 390.0
BYD3_k127_5480744_5 Aminoglycoside phosphotransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005107 312.0
BYD3_k127_5480744_6 maleylacetoacetate isomerase K01801 - 5.2.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000294 258.0
BYD3_k127_5480744_7 Domain of unknown function (DUF4382) - - - 0.000000000000000000000000000000000000000000000000000000000000007073 227.0
BYD3_k127_5480744_8 Putative DNA-binding domain - - - 0.0000000000000000000000000000000000000000000000002633 192.0
BYD3_k127_5480744_9 SMART Transport-associated and nodulation region K04065 - - 0.0000000000000000000004465 97.0
BYD3_k127_5495774_0 Bacterial protein of unknown function (DUF839) K07093 - - 7.885e-303 937.0
BYD3_k127_5495774_1 Copper chaperone PCu(A)C K07245,K09796,K14166 - - 0.0000000000000000000347 100.0
BYD3_k127_550342_0 Uroporphyrinogen-III synthase HemD - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006355 331.0
BYD3_k127_550342_1 TonB dependent receptor K02014 - - 0.000000000000000000000000000000000000000000000000000008338 193.0
BYD3_k127_550342_2 alginic acid biosynthetic process K10297 - - 0.00004249 47.0
BYD3_k127_5519412_0 DsrE/DsrF-like family - - - 0.00000000000000000000000000000000000000000000001579 180.0
BYD3_k127_5519412_1 alginic acid biosynthetic process - - - 0.00000000000000000000000000000008635 146.0
BYD3_k127_5519412_2 DsrE/DsrF-like family - - - 0.000000000000000000000000000002803 123.0
BYD3_k127_5519412_3 Histidine kinase K13924 - 2.1.1.80,3.1.1.61 0.000000000000000000002359 95.0
BYD3_k127_5519412_4 PFAM ATP-binding region, ATPase domain protein - - - 0.000000000000002707 79.0
BYD3_k127_5519412_5 DsrE/DsrF-like family - - - 0.0000000000005985 74.0
BYD3_k127_5519412_6 Regulator of chromosome condensation (RCC1) repeat - - - 0.0000002148 65.0
BYD3_k127_5520942_0 Bacterial periplasmic substrate-binding proteins K01713 - 4.2.1.51,4.2.1.91 0.00000000000000000000000000000000000000008248 162.0
BYD3_k127_5521377_0 metallophosphoesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003948 519.0
BYD3_k127_5521377_1 PFAM GCN5-related N-acetyltransferase - - - 0.00000000000000000000000000000000000000009107 156.0
BYD3_k127_5521377_2 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.00000000000000000000000000000000000003844 159.0
BYD3_k127_5521377_3 - - - - 0.00005038 53.0
BYD3_k127_5527090_0 COG1228 Imidazolonepropionase and related amidohydrolases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002956 499.0
BYD3_k127_5527090_1 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000173 299.0
BYD3_k127_5527090_2 Alpha/beta hydrolase family - - - 0.0000000000000000000001238 111.0
BYD3_k127_5534644_0 Putative esterase K07017 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006047 344.0
BYD3_k127_5534644_1 NAD dependent epimerase/dehydratase family K05281 - 1.3.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002057 342.0
BYD3_k127_5534644_2 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003161 317.0
BYD3_k127_5534644_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005125 288.0
BYD3_k127_5534644_4 FR47-like protein - - - 0.00000000000000000000000000000000000586 141.0
BYD3_k127_5534644_5 Histidine kinase - - - 0.0002511 49.0
BYD3_k127_5536080_0 Belongs to the ALAD family K01698 - 4.2.1.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000448 510.0
BYD3_k127_5536080_1 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 - 1.1.1.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001054 292.0
BYD3_k127_5536080_2 Methyladenine glycosylase K01246 - 3.2.2.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000002189 265.0
BYD3_k127_5536080_3 COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily - GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008270,GO:0009987,GO:0016043,GO:0022607,GO:0042802,GO:0043167,GO:0043169,GO:0043933,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0051259,GO:0051260,GO:0065003,GO:0070206,GO:0070207,GO:0071840 - 0.0000000000000000000000000000000000000000000000000000000000000000015 238.0
BYD3_k127_5536080_4 Histidine kinase - - - 0.00000000000000000000000000000000000000000002462 166.0
BYD3_k127_5545413_0 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003936 269.0
BYD3_k127_5545413_1 OsmC-like protein K06889,K07397 - - 0.000000000000000000000000000000000000302 145.0
BYD3_k127_5545413_2 Transcription factor zinc-finger - - - 0.0000000000000000000007086 98.0
BYD3_k127_5549502_0 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003296 409.0
BYD3_k127_5549502_1 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000004352 195.0
BYD3_k127_5549502_2 - - - - 0.000000000000000000000000000000000000000000000002622 180.0
BYD3_k127_5551449_0 Domain present in phytochromes and cGMP-specific phosphodiesterases. K07636 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001535 289.0
BYD3_k127_5554213_0 Bacterial lipid A biosynthesis acyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001678 339.0
BYD3_k127_5554213_1 membrane - - - 0.0000000000000000000000000000000000000000000000000000000004343 208.0
BYD3_k127_5554213_2 Fatty acyl CoA synthetase - - - 0.000000000000000000000000000000004478 137.0
BYD3_k127_5554213_3 membrane - - - 0.0000000000000000000000002265 113.0
BYD3_k127_5554213_4 3-hydroxymyristoyl 3-hydroxydecanoyl-(acyl carrier protein) - - - 0.0000000000007194 79.0
BYD3_k127_5558692_0 receptor K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003884 387.0
BYD3_k127_5558692_1 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000001626 226.0
BYD3_k127_5558692_2 Tricorn protease C1 domain K03797 - 3.4.21.102 0.0000000000000001907 83.0
BYD3_k127_5562774_0 Bacterial dnaA protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002864 368.0
BYD3_k127_5562774_1 Integrase core domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001369 350.0
BYD3_k127_5566897_0 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001122 330.0
BYD3_k127_5566897_1 component I K01657 - 4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000008896 253.0
BYD3_k127_5566897_2 4-amino-4-deoxychorismate lyase K02619 GO:0003674,GO:0003824,GO:0005488,GO:0006082,GO:0006575,GO:0006725,GO:0006732,GO:0006760,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008696,GO:0009987,GO:0016829,GO:0016830,GO:0016833,GO:0019752,GO:0019842,GO:0030170,GO:0034641,GO:0036094,GO:0042558,GO:0043167,GO:0043168,GO:0043436,GO:0043603,GO:0044237,GO:0044281,GO:0046483,GO:0048037,GO:0050662,GO:0051186,GO:0070279,GO:0071704,GO:0097159,GO:1901360,GO:1901363,GO:1901564 4.1.3.38 0.0000000000000000000000000000000000000000000000000000000000000000006735 237.0
BYD3_k127_5566897_3 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 GO:0003674,GO:0003824,GO:0004798,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009165,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.4.9 0.00000000000000000000000000000000000000000000000000000000000000004939 235.0
BYD3_k127_5566897_4 dna polymerase iii K02341 GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009360,GO:0009987,GO:0032991,GO:0034641,GO:0034645,GO:0042575,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0061695,GO:0071704,GO:0090304,GO:1901360,GO:1901576,GO:1902494,GO:1990234 2.7.7.7 0.0000000000000000000000000000000000000003516 158.0
BYD3_k127_5569646_0 Amino acid permease K03294 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002764 431.0
BYD3_k127_5569646_1 Ribosomal protein L11 methyltransferase (PrmA) - - - 0.00000000000000000000000000000000000000000000000000006349 199.0
BYD3_k127_5569646_2 Histone methylation protein DOT1 - - - 0.00000000000000000000000000000000000000000000009133 175.0
BYD3_k127_5569646_3 PFAM NADH flavin oxidoreductase NADH oxidase K10680 - - 0.0000000000000000003475 90.0
BYD3_k127_5569646_4 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.0000000006169 71.0
BYD3_k127_5572754_0 Sulfotransferase family - - - 5.067e-225 710.0
BYD3_k127_5572754_1 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005519 549.0
BYD3_k127_5572754_10 Putative 2OG-Fe(II) oxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000002435 238.0
BYD3_k127_5572754_11 PFAM phospholipase Carboxylesterase - - - 0.0000000000000000000000000000000000000000000002494 176.0
BYD3_k127_5572754_12 Cupin 2, conserved barrel domain protein - - - 0.000000000000000000000000000000000000001991 159.0
BYD3_k127_5572754_13 Uncharacterized ACR, COG1430 K09005 - - 0.000000000000000000000000000441 127.0
BYD3_k127_5572754_14 SMART Water stress and hypersensitive response - - - 0.00000000000000007842 86.0
BYD3_k127_5572754_15 - - - - 0.000000000002061 78.0
BYD3_k127_5572754_17 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 - 2.4.1.21 0.000001522 51.0
BYD3_k127_5572754_2 Sulfotransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002179 455.0
BYD3_k127_5572754_3 beta-hydroxylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004735 435.0
BYD3_k127_5572754_4 Sulfotransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005172 369.0
BYD3_k127_5572754_5 Cupin superfamily protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005834 362.0
BYD3_k127_5572754_6 Aspartyl/Asparaginyl beta-hydroxylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007761 339.0
BYD3_k127_5572754_7 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000007191 270.0
BYD3_k127_5572754_8 Prolyl 4-hydroxylase alpha subunit homologues. K00472 - 1.14.11.2 0.000000000000000000000000000000000000000000000000000000000000000000000009502 261.0
BYD3_k127_5572754_9 PKHD-type hydroxylase K07336 - - 0.00000000000000000000000000000000000000000000000000000000000000000000007205 246.0
BYD3_k127_5577607_0 COG1629 Outer membrane receptor proteins, mostly Fe transport - - - 0.0 1112.0
BYD3_k127_5577607_1 Putative 2OG-Fe(II) oxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002497 496.0
BYD3_k127_5577607_2 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 GO:0003674,GO:0003824,GO:0004360,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006002,GO:0006040,GO:0006047,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0016740,GO:0016769,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.6.1.16 0.000000000000000000000000000000000000000000000000000000000000002765 218.0
BYD3_k127_5577607_3 Peptidyl-prolyl cis-trans K03775 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000003706 215.0
BYD3_k127_5577607_4 Domain in cystathionine beta-synthase and other proteins. - - - 0.00000000000000000000000000000000000000000000004536 172.0
BYD3_k127_5582214_0 Histidine kinase K08082 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000008374 295.0
BYD3_k127_5582214_1 Response regulator of the LytR AlgR family K08083 - - 0.00000000000000000000000000000000000000000000000000000000000000000002127 240.0
BYD3_k127_5582214_2 6-phosphogluconate dehydrogenase, NAD-binding K00020,K00042 - 1.1.1.31,1.1.1.60 0.00000000000000000000000000000008357 127.0
BYD3_k127_5582214_3 YqjK-like protein - - - 0.0002477 48.0
BYD3_k127_5587506_0 Isocitrate dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008164 400.0
BYD3_k127_5587506_1 XRE family transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000189 272.0
BYD3_k127_5587506_2 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000001997 238.0
BYD3_k127_5587506_3 PFAM phosphoesterase PA-phosphatase related K19302 - 3.6.1.27 0.0000000000000000000000000000000000000000000001061 174.0
BYD3_k127_5597199_0 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 6.222e-246 767.0
BYD3_k127_5597199_1 NADP transhydrogenase K00324 - 1.6.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002502 607.0
BYD3_k127_5597199_2 COG0793 Periplasmic protease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001956 299.0
BYD3_k127_5597199_3 4TM region of pyridine nucleotide transhydrogenase, mitoch K00324 - 1.6.1.2 0.000000000000000000000000000000000000000000002205 166.0
BYD3_k127_5611725_0 Pilus assembly protein K12279 - - 0.00000000000000000000000000000000001444 150.0
BYD3_k127_5611725_1 type II and III secretion system protein K12282 - - 0.0000000000000000000000000000002211 134.0
BYD3_k127_5611725_2 Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins K12280 - - 0.00000000000000000000001525 115.0
BYD3_k127_5611725_3 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.000000000000003184 84.0
BYD3_k127_5611725_4 PFAM Fimbrial assembly family protein - - - 0.000000000000008914 82.0
BYD3_k127_5611725_5 - K12281 - - 0.00007977 49.0
BYD3_k127_5613132_0 NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding K00124 - - 8.109e-239 748.0
BYD3_k127_5613132_1 Formate dehydrogenase, alpha subunit K00123 - 1.17.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004699 343.0
BYD3_k127_5613132_2 Glutathione-dependent formaldehyde-activating enzyme K03396 - 4.4.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001649 301.0
BYD3_k127_5613132_3 Thioredoxin-like [2Fe-2S] ferredoxin K00127 - - 0.00000000000000000000000000000000000000000000000000000000003011 208.0
BYD3_k127_5613132_4 Cytochrome B561 K12262 - - 0.00000000000000000000000000000000000000000000000000004952 203.0
BYD3_k127_5613132_5 Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily K00121 GO:0003674,GO:0003824,GO:0004022,GO:0004024,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006081,GO:0008150,GO:0008152,GO:0008270,GO:0009056,GO:0009636,GO:0009987,GO:0010033,GO:0016491,GO:0016614,GO:0016616,GO:0016999,GO:0017001,GO:0017144,GO:0042221,GO:0042802,GO:0043167,GO:0043169,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046185,GO:0046292,GO:0046294,GO:0046872,GO:0046914,GO:0050896,GO:0051716,GO:0051903,GO:0055114,GO:0070887,GO:0071704,GO:0097237,GO:0098754,GO:0110095,GO:0110096,GO:1901575,GO:1901700,GO:1901701,GO:1990748 1.1.1.1,1.1.1.284 0.00000000000000000001201 91.0
BYD3_k127_5614129_0 Peptidase, M28 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001586 397.0
BYD3_k127_5614129_1 N-acetylphosphatidylethanolamine-hydrolysing phospholipas activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001447 355.0
BYD3_k127_5614129_2 LysR substrate binding domain K03566 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005532 285.0
BYD3_k127_5614129_3 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000001603 234.0
BYD3_k127_5614129_4 - - - - 0.000002057 49.0
BYD3_k127_5620580_0 COG1629 Outer membrane receptor proteins, mostly Fe transport - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002135 368.0
BYD3_k127_5620580_1 Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000000000000000000000000000000000000000000009572 225.0
BYD3_k127_5630338_0 Bifunctional purine biosynthesis protein PurH K00602 GO:0003674,GO:0003824,GO:0004643,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016741,GO:0016742,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.2.3,3.5.4.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005013 542.0
BYD3_k127_5630338_1 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05540 GO:0002943,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009314,GO:0009451,GO:0009628,GO:0009987,GO:0010467,GO:0016070,GO:0016491,GO:0016627,GO:0017150,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0050896,GO:0055114,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003409 423.0
BYD3_k127_5630338_2 Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters K03557 - - 0.00000000000000000007853 93.0
BYD3_k127_5630338_3 Mj0042 family finger-like - - - 0.000000000003539 71.0
BYD3_k127_5632621_0 Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH K00033 - 1.1.1.343,1.1.1.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002646 346.0
BYD3_k127_5632621_1 - - - - 0.000000000000000000000000000000000000000000000000000004792 198.0
BYD3_k127_5632621_2 Sigma-70, region 4 - - - 0.000000000000000000000000000000000000000000000002068 187.0
BYD3_k127_5632621_3 - - - - 0.00000000001794 66.0
BYD3_k127_5654057_0 Domain of unknown function (DUF1705) K03760 - 2.7.8.43 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001755 433.0
BYD3_k127_5654235_0 Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation K02232 - 6.3.5.10 9.109e-194 617.0
BYD3_k127_5654235_1 Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group K02227 - 6.3.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001814 366.0
BYD3_k127_5654235_2 ABC transporter K02013 - 3.6.3.34 0.0000000000000000000000000000004446 125.0
BYD3_k127_5654235_3 adenosyltransferase K00798 - 2.5.1.17 0.000000000000000004218 84.0
BYD3_k127_5661202_0 nitrite transmembrane transporter activity - - - 2.026e-266 847.0
BYD3_k127_5661202_1 Respiratory nitrate reductase beta C-terminal K00371 - 1.7.5.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002217 563.0
BYD3_k127_5661202_2 nitrate reductase, gamma subunit K00374 - 1.7.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001848 419.0
BYD3_k127_5661202_3 TIGRFAM nitrate reductase molybdenum cofactor assembly chaperone K00373 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003998 322.0
BYD3_k127_5661202_4 PFAM PpiC-type peptidyl-prolyl cis-trans isomerase K03769 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005431 332.0
BYD3_k127_5661202_5 BON domain - - - 0.0007427 42.0
BYD3_k127_5671013_0 - - - - 0.000000000000000000000000000000000000000000000542 174.0
BYD3_k127_5675684_0 Trehalase K01194 - 3.2.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005644 606.0
BYD3_k127_5675684_1 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K03307 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001755 601.0
BYD3_k127_5675684_2 Ferritin-like K20087 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001431 272.0
BYD3_k127_5675684_3 Polyketide cyclase / dehydrase and lipid transport - - - 0.0000000000000000000000000000000000000000002616 163.0
BYD3_k127_5675684_4 Domain of unknown function (DUF4166) - - - 0.000000000000000000000000000000000000001089 156.0
BYD3_k127_5675684_5 HWE histidine kinase - - - 0.000000000000000000000000000000000005059 140.0
BYD3_k127_5677312_0 Electron transporter SenC - - - 0.0000000000000000000000000000000000000006824 158.0
BYD3_k127_5677312_1 Transcriptional regulator - - - 0.00008977 49.0
BYD3_k127_5677663_0 TIGRFAM glutamate synthase, NADH NADPH, small subunit K00266 - 1.4.1.13,1.4.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006654 477.0
BYD3_k127_5677663_1 COG1131 ABC-type multidrug transport system, ATPase component K01990 GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0009314,GO:0009628,GO:0010165,GO:0010212,GO:0016020,GO:0044464,GO:0050896,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006336 409.0
BYD3_k127_5677663_2 Transport permease protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001438 344.0
BYD3_k127_5677663_3 Type II secretory pathway component ExeA K02450 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000569 259.0
BYD3_k127_5677663_4 Putative prokaryotic signal transducing protein - - - 0.000000000000001327 79.0
BYD3_k127_5688171_0 UvrD/REP helicase N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001456 556.0
BYD3_k127_5689237_0 COG1629 Outer membrane receptor proteins, mostly Fe transport - - - 0.0 1097.0
BYD3_k127_5689237_1 Nitronate monooxygenase K00459 - 1.13.12.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000352 374.0
BYD3_k127_5689237_2 Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001862 369.0
BYD3_k127_5689237_3 PFAM Short-chain dehydrogenase reductase SDR - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002395 282.0
BYD3_k127_5689237_4 Glutathione S-transferase K00799 - 2.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000055 233.0
BYD3_k127_5689237_5 Acyl-CoA dehydrogenase, C-terminal domain K00249 - 1.3.8.7 0.00000000000000000000000000000000000000000000000004468 192.0
BYD3_k127_5689237_6 PFAM AMP-dependent synthetase and ligase - - - 0.000000000003115 70.0
BYD3_k127_5692178_0 Putative esterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007259 357.0
BYD3_k127_5692178_1 Nitronate monooxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005415 325.0
BYD3_k127_5696394_0 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004412 471.0
BYD3_k127_5696394_1 phosphorelay sensor kinase activity K13598,K13924 - 2.1.1.80,2.7.13.3,3.1.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000395 402.0
BYD3_k127_5696394_2 amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002375 339.0
BYD3_k127_5696394_3 Domain of unknown function (DUF4154) - - - 0.0000008475 53.0
BYD3_k127_5702504_0 - - - - 0.0000000000000000000000002057 112.0
BYD3_k127_5702504_1 Outer membrane usher protein K07347 - - 0.000000000000000000000006173 115.0
BYD3_k127_5702504_2 Acetyltransferase (GNAT) domain K02348 - - 0.0000000000000000000001779 98.0
BYD3_k127_5702504_3 - - - - 0.000000000000000000003285 98.0
BYD3_k127_5702504_4 - - - - 0.000000006901 66.0
BYD3_k127_5709082_0 Belongs to the ABC transporter superfamily K02031 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002439 491.0
BYD3_k127_5709082_1 Oligopeptide/dipeptide transporter, C-terminal region K02032 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005956 297.0
BYD3_k127_5717081_0 Malic enzyme, NAD binding domain K00027 - 1.1.1.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001081 517.0
BYD3_k127_5717081_1 chromosome segregation K03497 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003319 314.0
BYD3_k127_5717081_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005616 269.0
BYD3_k127_5737364_0 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001683 310.0
BYD3_k127_5737364_1 PFAM protein-L-isoaspartate(D-aspartate) O-methyltransferase K00573 - 2.1.1.77 0.000000000000000000000000000000000000000000000000000000001712 207.0
BYD3_k127_5737364_2 type I secretion outer membrane protein, TolC K12340 - - 0.000000000000000000000000000000000000000000000001548 190.0
BYD3_k127_5737364_3 Rhodanese Homology Domain - - - 0.0000000000000000000000293 103.0
BYD3_k127_5756904_0 Tryptophan halogenase - - - 8.121e-244 763.0
BYD3_k127_5756904_1 TonB-dependent receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002629 508.0
BYD3_k127_5756904_2 SapC - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004596 313.0
BYD3_k127_5756904_3 A domain family that is part of the cupin metalloenzyme superfamily. - - - 0.000000000000000000000000000000000000000000000000000002156 194.0
BYD3_k127_5766809_0 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000229 538.0
BYD3_k127_5766809_1 Tetratricopeptide repeat - - - 0.00000000000000000000000000000008822 132.0
BYD3_k127_5827593_0 Protein of unknown function (DUF3604) - - - 2.989e-217 704.0
BYD3_k127_5827593_1 Dienelactone hydrolase K01061 - 3.1.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005297 293.0
BYD3_k127_5827593_2 PPIC-type PPIASE domain - - - 0.00000000000000000000000000000000000000000000000000377 194.0
BYD3_k127_5827593_3 Peptidase family M49 - - - 0.00000000000000000000000000000000000000000007008 166.0
BYD3_k127_5827593_4 HupE / UreJ protein - - - 0.00000000000000000000000000002745 130.0
BYD3_k127_5851043_0 PFAM blue (type 1) copper domain protein - - - 0.000000000000000000000000000000000000000004997 164.0
BYD3_k127_5851043_1 GGDEF domain containing protein - - - 0.000000000000000001376 98.0
BYD3_k127_5851043_2 - - - - 0.00000000000007287 81.0
BYD3_k127_5868660_0 Alpha beta hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002016 276.0
BYD3_k127_5868660_1 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000001327 238.0
BYD3_k127_5868660_2 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length K04760 - - 0.0000000000000000000000000000000000000000000000000007236 187.0
BYD3_k127_5868660_3 Peptidase family M13 K07386 - - 0.000000000000000000000000002442 119.0
BYD3_k127_5869180_0 Glycine cleavage system P-protein K00282 - 1.4.4.2 2.613e-197 625.0
BYD3_k127_5869180_1 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00283 - 1.4.4.2 0.00000000000000000000000000003229 123.0
BYD3_k127_5875001_0 TIGRFAM galactose-1-phosphate uridylyltransferase K00965 - 2.7.7.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001468 402.0
BYD3_k127_5875001_1 Galactokinase galactose-binding signature K00849 - 2.7.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009689 314.0
BYD3_k127_5884864_0 Protein tyrosine kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002817 494.0
BYD3_k127_5884864_1 DNA-templated transcription, initiation K02405 - - 0.000000000000000000000000000000000000000000000000000008775 196.0
BYD3_k127_5884864_2 SnoaL-like domain - - - 0.000000000000000000000000000000000000000000000000003984 184.0
BYD3_k127_5893812_0 Patatin-like phospholipase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003772 493.0
BYD3_k127_5893812_1 Protein tyrosine kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001918 473.0
BYD3_k127_5893812_2 ECF sigma factor - - - 0.00000000000000000000000000000000000000000000000000002468 195.0
BYD3_k127_5893812_3 Tetratricopeptide repeat - - - 0.000000000000000000000000000002458 123.0
BYD3_k127_5900381_0 pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for K15987 - 3.6.1.1 1.341e-255 793.0
BYD3_k127_5900381_1 helix_turn_helix, arabinose operon control protein K07506 - - 0.00000000000000000000000002788 120.0
BYD3_k127_5900894_0 MotA/TolQ/ExbB proton channel family K02556 - - 0.0000000000000000000000000000000005077 138.0
BYD3_k127_5900894_1 Bacterial type II and III secretion system protein - - - 0.000000000000000000000000000000001182 140.0
BYD3_k127_5900894_2 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000003599 101.0
BYD3_k127_5909767_0 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K14393 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003461 442.0
BYD3_k127_5909767_1 radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.0000000000000000000000000000000000000000000000000000000000001223 221.0
BYD3_k127_5909767_2 Pfam:N_methyl_2 K10927 - - 0.000000000000000000002507 98.0
BYD3_k127_5909767_3 Prokaryotic N-terminal methylation motif K12285 - - 0.000000000000000254 90.0
BYD3_k127_5909767_4 Pilus assembly protein PilX K12286 - - 0.000000437 59.0
BYD3_k127_5909767_5 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.0002741 50.0
BYD3_k127_5910723_0 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001494 305.0
BYD3_k127_5910723_1 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.000000000000000000000000000000000000000000003122 169.0
BYD3_k127_5910723_2 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.0000000000000000000000000000000000000001798 156.0
BYD3_k127_5910723_3 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 - - 0.00000000000000000000000000000000113 132.0
BYD3_k127_5912848_0 Lipoprotein - - - 0.000000000000000000000000000000000000000000000000000005217 196.0
BYD3_k127_5912848_1 MgtC SapB transporter K07507 - - 0.0000000000000000000000000000000000000005218 155.0
BYD3_k127_5912848_2 Lytic murein transglycosylase K08309 - - 0.00000000002657 69.0
BYD3_k127_5916730_0 Zinc-binding dehydrogenase K00001,K13953 - 1.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000221 346.0
BYD3_k127_5916730_1 Phytanoyl-CoA dioxygenase (PhyH) K00477 - 1.14.11.18 0.0000000000000000000000000000000000000000000000000000000000003008 223.0
BYD3_k127_5916730_2 AMP-binding enzyme - - - 0.00000000000000000000000000000000000000000000000000000001967 206.0
BYD3_k127_5916730_3 Receptor - - - 0.000000000000000000000000000000000000000001969 171.0
BYD3_k127_5916730_4 Glyoxalase-like domain - - - 0.000000000000000000000000000002839 132.0
BYD3_k127_5918456_0 STAS domain K03321 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003617 269.0
BYD3_k127_5918456_1 Protein of unknown function (DUF3667) - - - 0.000000000000000002002 89.0
BYD3_k127_5930980_0 Protein of unknown function (DUF1549) - - - 1.553e-286 892.0
BYD3_k127_5942431_0 PFAM histone deacetylase superfamily K04768 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005781 430.0
BYD3_k127_5942431_1 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006454 359.0
BYD3_k127_5959265_0 PFAM type II secretion system protein E K02283 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002338 516.0
BYD3_k127_5959265_1 Cellulose biosynthesis protein BcsQ K02282 - - 0.0000000002485 67.0
BYD3_k127_5964424_0 The M ring may be actively involved in energy transduction K02409 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004136 413.0
BYD3_k127_5964424_1 Two component, sigma54 specific, transcriptional regulator, Fis family K10943 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004933 369.0
BYD3_k127_5964424_2 Flagellar hook-basal body complex protein FliE K02408 - - 0.000000000000000000000006392 104.0
BYD3_k127_5964424_3 Fis family transcriptional regulator K10941 - - 0.0000004722 51.0
BYD3_k127_5968128_0 Protein of unknown function (DUF1800) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002428 405.0
BYD3_k127_5968128_1 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001567 259.0
BYD3_k127_5968128_2 Protein of unknown function (DUF1501) - - - 0.000000000000000000000000000000000000000000000000001245 192.0
BYD3_k127_5968128_3 Lanthionine synthetase C family protein - - - 0.000000000000000000002016 103.0
BYD3_k127_5969056_0 phosphatase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001307 327.0
BYD3_k127_5969056_1 Glycosyltransferase Family 4 - - - 0.00000000000000000000000000000000000000000000000000000001208 199.0
BYD3_k127_5969056_2 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000002032 153.0
BYD3_k127_5969900_0 enterobactin catabolic process - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001758 469.0
BYD3_k127_5969900_1 Acetylornithine deacetylase Succinyl-diaminopimelate - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002547 290.0
BYD3_k127_5970605_0 AMP-dependent synthetase - - - 8.074e-283 904.0
BYD3_k127_5970605_1 PFAM Bacterial capsule synthesis protein PGA_cap K07282 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001779 441.0
BYD3_k127_5970605_10 Nitroreductase family - - - 0.0000000000000000000000000000000000000000001675 166.0
BYD3_k127_5970605_11 Domain of unknown function DUF302 - - - 0.000000000000000000000000000000000000000001081 169.0
BYD3_k127_5970605_12 - - - - 0.00000000000000000000000000000000000000004039 157.0
BYD3_k127_5970605_13 Thermostable hemolysin - - - 0.00000000000000000000000000000000001411 142.0
BYD3_k127_5970605_14 GYD domain - - - 0.00000000000000000000000000000001949 128.0
BYD3_k127_5970605_15 periplasmic protein - - - 0.000000000000000000000000003823 119.0
BYD3_k127_5970605_16 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000000000000000000002177 108.0
BYD3_k127_5970605_17 Domain in cystathionine beta-synthase and other proteins. - - - 0.000000000000000000002768 101.0
BYD3_k127_5970605_18 Bacterial protein of unknown function (DUF883) - - - 0.0000000000000000006593 92.0
BYD3_k127_5970605_19 Protein of unknown function (DUF2892) - - - 0.000000000000000002415 86.0
BYD3_k127_5970605_2 Amp-dependent synthetase and ligase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002549 392.0
BYD3_k127_5970605_21 Protein of unknown function (DUF2934) - - - 0.0000005674 56.0
BYD3_k127_5970605_3 Iron-containing redox enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000468 255.0
BYD3_k127_5970605_4 Dienelactone hydrolase family K07100 - - 0.000000000000000000000000000000000000000000000000000000000000000000001132 243.0
BYD3_k127_5970605_5 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000000000003702 241.0
BYD3_k127_5970605_6 COG0457 FOG TPR repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000602 234.0
BYD3_k127_5970605_7 Isochorismatase family K08281 - 3.5.1.19 0.000000000000000000000000000000000000000000000000000000000000004818 229.0
BYD3_k127_5970605_8 bacterial OsmY and nodulation domain K04065 - - 0.00000000000000000000000000000000000000000000000000000001796 204.0
BYD3_k127_5970605_9 signal transduction protein containing a membrane domain, an EAL and a GGDEF domain - - - 0.00000000000000000000000000000000000000000000000009738 192.0
BYD3_k127_5976442_0 Sh3 type 3 domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000005004 252.0
BYD3_k127_5976442_1 helix_turn_helix, arabinose operon control protein K07506 - - 0.0000000000000000000000002822 117.0
BYD3_k127_5976442_2 flavoprotein involved in K transport - - - 0.0000001912 53.0
BYD3_k127_5983567_0 PFAM Chemotaxis methyl-accepting receptor, signalling K03406,K05874 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000009898 280.0
BYD3_k127_5983567_1 chemotaxis K03406 - - 0.000000000000000000000000000000000000000000205 171.0
BYD3_k127_5993877_0 amino acid K03294 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005333 533.0
BYD3_k127_5993877_1 Inositol monophosphatase K01092 - 3.1.3.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008535 318.0
BYD3_k127_5993877_2 Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA K15396 - 2.1.1.200 0.00000000000000000000000000000000000000000000000000000000000000000000067 244.0
BYD3_k127_5993877_3 Integral membrane protein TerC family - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000977 210.0
BYD3_k127_5993877_4 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 GO:0001522,GO:0003674,GO:0003824,GO:0004123,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006790,GO:0006807,GO:0008033,GO:0008144,GO:0008150,GO:0008152,GO:0008483,GO:0009000,GO:0009058,GO:0009451,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016226,GO:0016740,GO:0016769,GO:0016782,GO:0016783,GO:0016829,GO:0016846,GO:0018130,GO:0018131,GO:0019842,GO:0022607,GO:0030170,GO:0031071,GO:0031119,GO:0031163,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046484,GO:0048037,GO:0050662,GO:0051186,GO:0070279,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0097163,GO:0140104,GO:1901360,GO:1901363 2.8.1.7 0.00000987 48.0
BYD3_k127_6005870_0 DNA polymerase LigD, polymerase domain protein K01971 - 6.5.1.1 1.022e-203 644.0
BYD3_k127_6007718_0 PFAM Peptidoglycan-binding lysin domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001501 280.0
BYD3_k127_6007718_1 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.00000000000000000000000000000000000000000000000000000000000000000000001781 245.0
BYD3_k127_6007718_2 TIGRFAM DNA protecting protein DprA K04096 - - 0.00000000000000000000000000002018 123.0
BYD3_k127_6023520_0 TIGRFAM type I secretion membrane fusion protein, HlyD family K02022,K12537 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000241 277.0
BYD3_k127_6023520_1 PFAM ABC transporter K12541 - - 0.0001527 46.0
BYD3_k127_6027254_0 Small-conductance mechanosensitive channel K05802 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000168 288.0
BYD3_k127_6027254_1 phospholipase - - - 0.0000000000000000000000000000000000000000000000000000000000001445 224.0
BYD3_k127_6027254_2 RF-1 domain K15034 GO:0003674,GO:0003676,GO:0003723,GO:0003747,GO:0003824,GO:0004045,GO:0005488,GO:0006412,GO:0006414,GO:0006415,GO:0006417,GO:0006518,GO:0006807,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010608,GO:0016043,GO:0016150,GO:0016787,GO:0016788,GO:0019222,GO:0019538,GO:0022411,GO:0031323,GO:0031326,GO:0032268,GO:0032984,GO:0034248,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044877,GO:0050789,GO:0050794,GO:0051171,GO:0051246,GO:0052689,GO:0060255,GO:0065007,GO:0071704,GO:0071840,GO:0072344,GO:0080090,GO:0097159,GO:0140098,GO:0140101,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:2000112 - 0.000000000000000000000000000000000002091 143.0
BYD3_k127_6036242_0 PFAM AMP-dependent synthetase and ligase - - - 1.334e-204 652.0
BYD3_k127_6036242_1 lipolytic protein G-D-S-L family - - - 0.0000000000000000000000000000000005089 143.0
BYD3_k127_6036242_2 PFAM Orn DAP Arg decarboxylase 2 K01586 - 4.1.1.20 0.0000000000000000000000000000001434 132.0
BYD3_k127_6070528_0 TonB-dependent receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002236 422.0
BYD3_k127_6070528_1 pfkB family carbohydrate kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003902 328.0
BYD3_k127_6074566_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003804 309.0
BYD3_k127_6074566_1 Putative diguanylate phosphodiesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001259 262.0
BYD3_k127_6075721_0 TonB dependent receptor K02014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001139 557.0
BYD3_k127_6083780_0 NMT1-like family K07080 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002469 394.0
BYD3_k127_6092846_0 COG0365 Acyl-coenzyme A synthetases AMP-(fatty) acid ligases K08295 - 6.2.1.32 8.265e-211 669.0
BYD3_k127_6092846_1 Aminotransferase class-V - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007107 535.0
BYD3_k127_6092846_2 helix_turn_helix multiple antibiotic resistance protein - - - 0.00000000000000006444 85.0
BYD3_k127_6092846_3 helix_turn_helix ASNC type - - - 0.000000002291 59.0
BYD3_k127_6102491_0 YceI-like domain - - - 0.000000000000000000000000000000000000000000000000000001003 195.0
BYD3_k127_6102491_1 Major Facilitator Superfamily K19577 - - 0.00000000000000000000000000000000000000000000003653 183.0
BYD3_k127_6126226_0 Bacterial protein of unknown function (DUF885) - - - 3.901e-214 677.0
BYD3_k127_6126226_1 COG0733 Na -dependent transporters of the SNF family K03308 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001332 404.0
BYD3_k127_6126226_2 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000001429 225.0
BYD3_k127_6128398_0 PFAM Outer membrane efflux protein K18300 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007525 441.0
BYD3_k127_6128398_1 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K18299 - - 0.000000000000000000000000000000000000000004212 156.0
BYD3_k127_6143034_0 domain, Protein K15125 - - 0.000000000000000000000000000000000000000000000000000000000000007473 242.0
BYD3_k127_6143034_1 Pfam SNARE associated Golgi protein - - - 0.0000000000000000000000000000000000000000000000000000000453 201.0
BYD3_k127_6143034_2 Isochorismatase family - - - 0.00000000000000000000000000000000000000000006534 167.0
BYD3_k127_6143034_3 FAD dependent oxidoreductase K09471 - - 0.00000000000000003644 83.0
BYD3_k127_6143034_4 Phospholipid methyltransferase - - - 0.000000000000002285 83.0
BYD3_k127_6151638_0 AhpC/TSA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003214 321.0
BYD3_k127_6151638_1 acyl-CoA dehydrogenase activity - - - 0.000000000003208 78.0
BYD3_k127_6160653_0 Glycosyltransferase Family 4 K13668 - 2.4.1.346 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004853 365.0
BYD3_k127_6160653_1 NmrA-like family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003548 289.0
BYD3_k127_6160653_2 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000002289 249.0
BYD3_k127_6160653_3 PFAM FAD dependent oxidoreductase K00111 - 1.1.5.3 0.000000000000000000000000000000000000000000000005626 181.0
BYD3_k127_6160653_4 Protein tyrosine kinase - - - 0.0000000000000000000000000000000000000000000002638 188.0
BYD3_k127_6162075_0 Zinc-binding dehydrogenase K00008 - 1.1.1.14 1.068e-196 622.0
BYD3_k127_6162075_1 WYL domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009245 272.0
BYD3_k127_6162075_2 cyclase dehydrase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000008109 273.0
BYD3_k127_6162075_3 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K06996 - - 0.00000000000000000000000000000000000002414 153.0
BYD3_k127_6162075_4 Protein conserved in bacteria - - - 0.0000000000000000000000000000000000001597 149.0
BYD3_k127_6162075_5 glyoxalase bleomycin resistance protein dioxygenase K06996 - - 0.000000000000000000000000000728 124.0
BYD3_k127_6162075_6 Glucose dehydrogenase K00117 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 1.1.5.2 0.00000000000000000000001881 104.0
BYD3_k127_6181547_0 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP K02837 GO:0003674,GO:0003676,GO:0003723,GO:0003747,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0016150,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001278 348.0
BYD3_k127_6181547_1 Ribosomal-protein-alanine acetyltransferase K03789 - 2.3.1.128 0.00000000000000000000000000000000000000004573 159.0
BYD3_k127_6181547_2 Phage SPO1 DNA polymerase-related protein K21929 - 3.2.2.27 0.00000000000000000000000000006571 117.0
BYD3_k127_6181547_3 periplasmic or secreted lipoprotein - - - 0.000000000000000000000000012 121.0
BYD3_k127_6183817_0 AMP-binding enzyme K00666 - - 2.774e-228 717.0
BYD3_k127_6183817_1 receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000427 527.0
BYD3_k127_6183817_2 helix_turn_helix, arabinose operon control protein K07506 - - 0.0000000000000000000000000000000000000000000000000000000000000000001249 240.0
BYD3_k127_6191654_0 Vitamin B12 dependent methionine synthase, activation K00548 - 2.1.1.13 0.0 1092.0
BYD3_k127_6194660_0 it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins K02314 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001217 553.0
BYD3_k127_6194660_1 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002804 338.0
BYD3_k127_6194660_2 Inner membrane component of T3SS, cytoplasmic domain - - - 0.000000000000000000000000000000000000000000002929 171.0
BYD3_k127_6194660_3 binds to the 23S rRNA K02939 - - 0.000000006023 57.0
BYD3_k127_6195970_0 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002785 389.0
BYD3_k127_6195970_1 Glutathione S-transferase, C-terminal domain K00799 - 2.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001451 348.0
BYD3_k127_6195970_2 Peptidase m28 - - - 0.0000000000000000116 84.0
BYD3_k127_6197936_0 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate K00147 GO:0003674,GO:0003824,GO:0004350,GO:0008150,GO:0008152,GO:0016491,GO:0016620,GO:0016903,GO:0055114 1.2.1.41 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005559 402.0
BYD3_k127_6197936_1 Major facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004316 370.0
BYD3_k127_6198763_0 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000007294 256.0
BYD3_k127_6198763_1 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000001317 229.0
BYD3_k127_6205276_0 Transcriptional regulator - - - 0.00000000000000000000000000000000000000008395 168.0
BYD3_k127_6205276_1 electron transfer activity - - - 0.0000000000000000000000000000000007925 143.0
BYD3_k127_6212681_0 Belongs to the metallo-dependent hydrolases superfamily. NagA family K01443 - 3.5.1.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009129 486.0
BYD3_k127_6212681_1 PFAM sugar isomerase (SIS) K00820 - 2.6.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002441 400.0
BYD3_k127_6212681_2 helix-turn-helix- domain containing protein, AraC type K13653 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006023 380.0
BYD3_k127_6212681_3 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family K00383 - 1.8.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003871 312.0
BYD3_k127_6212681_4 UTRA - - - 0.0000000000000009529 77.0
BYD3_k127_6214455_0 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.00000000000000000000000000000000000000000000000000000002602 200.0
BYD3_k127_6214455_1 PFAM ApaG domain protein K06195 - - 0.000000000000000000000000000000000000000000000000009031 184.0
BYD3_k127_6214455_2 Universal stress protein K06149 - - 0.00000000000000000000000000001964 122.0
BYD3_k127_6214455_3 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 GO:0000154,GO:0000179,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.182 0.000000000000888 70.0
BYD3_k127_6220185_0 Protein of unknown function (DUF2785) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007329 273.0
BYD3_k127_6220185_1 Protein of unknown function (DUF1624) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000284 253.0
BYD3_k127_6220185_2 Domain of unknown function (DUF4440) - - - 0.00000000000000000000000000000000000000000002713 165.0
BYD3_k127_6220185_3 Protein of unknown function (DUF1624) - - - 0.0000000000000000000000006601 104.0
BYD3_k127_6220185_4 7TM diverse intracellular signalling - - - 0.000000004131 69.0
BYD3_k127_6224652_0 enoyl-CoA hydratase K15866 - 5.3.3.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006548 351.0
BYD3_k127_6224652_1 Flavodoxin reductases (Ferredoxin-NADPH reductases) family 1 K02613 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004902 343.0
BYD3_k127_6224652_2 Phenylacetate-CoA oxygenase, PaaI subunit K02611 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006725,GO:0006805,GO:0008150,GO:0008152,GO:0009056,GO:0009404,GO:0009407,GO:0009410,GO:0009636,GO:0009850,GO:0009852,GO:0009987,GO:0010124,GO:0010817,GO:0016054,GO:0019439,GO:0019748,GO:0019752,GO:0032787,GO:0042178,GO:0042221,GO:0042445,GO:0042447,GO:0042537,GO:0043436,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046395,GO:0050896,GO:0051716,GO:0065007,GO:0065008,GO:0070887,GO:0071466,GO:0071704,GO:0072329,GO:0098754,GO:1901360,GO:1901361,GO:1901575 1.14.13.149 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002358 282.0
BYD3_k127_6224652_3 phenylacetic acid degradation protein K02614 - - 0.0000000000000000000000000000000000000000000000000000002583 196.0
BYD3_k127_6224652_4 Pfam:DUF59 K02612 - - 0.0000000000000000000000000000000000000000000000000000008798 198.0
BYD3_k127_6224652_5 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 0.00005644 45.0
BYD3_k127_6237840_0 homoserine dehydrogenase K12524 - 1.1.1.3,2.7.2.4 0.000000000000000000000000000000000000000000000000000000000000000000002372 244.0
BYD3_k127_6237840_1 COG3267 Type II secretory pathway, component ExeA - - - 0.00000000000000000000000000000002232 141.0
BYD3_k127_6237840_2 PFAM Forkhead-associated protein - - - 0.000000002579 69.0
BYD3_k127_6246877_0 Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate K00108 - 1.1.99.1 8.768e-210 665.0
BYD3_k127_6246877_1 COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II K01897 GO:0001676,GO:0003674,GO:0003824,GO:0004467,GO:0005488,GO:0005504,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006139,GO:0006163,GO:0006629,GO:0006631,GO:0006635,GO:0006637,GO:0006644,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008289,GO:0008610,GO:0008654,GO:0009056,GO:0009058,GO:0009062,GO:0009117,GO:0009150,GO:0009259,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009898,GO:0009987,GO:0015645,GO:0016020,GO:0016042,GO:0016054,GO:0016405,GO:0016874,GO:0016877,GO:0016878,GO:0019395,GO:0019637,GO:0019693,GO:0019752,GO:0030258,GO:0031406,GO:0032787,GO:0033293,GO:0033865,GO:0033875,GO:0034032,GO:0034440,GO:0034641,GO:0035383,GO:0036041,GO:0036094,GO:0043167,GO:0043168,GO:0043177,GO:0043436,GO:0043603,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044249,GO:0044255,GO:0044281,GO:0044282,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0046395,GO:0046483,GO:0050896,GO:0051186,GO:0055086,GO:0055114,GO:0070538,GO:0071704,GO:0071944,GO:0072329,GO:0072521,GO:0090407,GO:0098552,GO:0098562,GO:1901135,GO:1901360,GO:1901564,GO:1901575,GO:1901576 6.2.1.3 1.721e-206 657.0
BYD3_k127_6246877_2 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis K00850 - 2.7.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001158 388.0
BYD3_k127_6246877_3 Long-chain fatty acid transport protein K06076 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001887 372.0
BYD3_k127_6246877_4 Patatin-like phospholipase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001656 352.0
BYD3_k127_6246877_5 Protein of unknown function (DUF1298) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008958 284.0
BYD3_k127_6246877_6 - - - - 0.000000000000000000000000000000000007973 146.0
BYD3_k127_6246877_7 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000000000000000000000001562 128.0
BYD3_k127_6246877_8 Poly(hydroxyalcanoate) granule associated protein - - - 0.0000000000000000003729 94.0
BYD3_k127_6262235_0 COG1012 NAD-dependent aldehyde dehydrogenases K13922,K15515 - 1.2.1.81,1.2.1.87 3.964e-210 662.0
BYD3_k127_6262235_1 Major facilitator superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007404 607.0
BYD3_k127_6262235_2 Belongs to the type-B carboxylesterase lipase family K03929 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002585 548.0
BYD3_k127_6262235_3 thiamine pyrophosphate protein TPP binding domain protein K01652 - 2.2.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009586 437.0
BYD3_k127_6262235_4 Shikimate dehydrogenase substrate binding domain K00014 - 1.1.1.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006548 316.0
BYD3_k127_6262235_5 Carboxylesterase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004915 304.0
BYD3_k127_6262235_6 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.000000000000000000000000000000000000000000000000000000000000000000001776 237.0
BYD3_k127_6267359_0 Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization K03610 - - 0.0000000000000000000000000000000000000000000000000000000003132 229.0
BYD3_k127_6267359_1 CHASE - - - 0.00000000000000000000000000000000000000000000000000001736 208.0
BYD3_k127_6269218_0 Serine aminopeptidase, S33 K01259 - 3.4.11.5 0.00000000000000000000000000000000000000000000000000000000000000000389 239.0
BYD3_k127_6269218_1 ABC transporter - - - 0.000000000000000000000000000000000000000000000000001886 192.0
BYD3_k127_6270990_0 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0000413,GO:0003674,GO:0003755,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0006464,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009266,GO:0009408,GO:0009628,GO:0009987,GO:0016853,GO:0016859,GO:0018193,GO:0018208,GO:0019538,GO:0036211,GO:0042802,GO:0043021,GO:0043022,GO:0043170,GO:0043335,GO:0043412,GO:0044183,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0050896,GO:0051083,GO:0061077,GO:0071704,GO:0140096,GO:1901564 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007445 392.0
BYD3_k127_6270990_1 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems, periplasmic components K02051 - - 0.0000000000000000000000000000000000000000000009186 189.0
BYD3_k127_6270990_2 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.000000000000000000000000000000002764 129.0
BYD3_k127_62750_0 Belongs to the beta-ketoacyl-ACP synthases family K09458 - 2.3.1.179 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009816 607.0
BYD3_k127_62750_1 Acyl-coenzyme A synthetases AMP-(fatty) acid ligases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004417 287.0
BYD3_k127_6278910_0 nuclease activity K02335 GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0003887,GO:0004518,GO:0004527,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008408,GO:0008409,GO:0009058,GO:0009059,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0018130,GO:0019438,GO:0033554,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:0090305,GO:0097159,GO:0140097,GO:1901360,GO:1901362,GO:1901363,GO:1901576 2.7.7.7 0.00000000000000000000000000000000000000000000000000003831 190.0
BYD3_k127_6278910_1 Reprolysin (M12B) family zinc metalloprotease - - - 0.0000000000000000000000000000000000000000006323 182.0
BYD3_k127_6278910_2 dehydratase - - - 0.00000000000003905 77.0
BYD3_k127_6287314_0 Thioredoxin K03671 - - 0.000000000000000000000000000000000002188 147.0
BYD3_k127_6287314_1 Domain of unknown function (DUF4112) - - - 0.000000000000000000000000000000000003856 141.0
BYD3_k127_6287314_2 - - - - 0.000000000000685 74.0
BYD3_k127_6287314_3 HEPN domain - - - 0.0000000001129 65.0
BYD3_k127_6290481_0 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 1.192e-211 668.0
BYD3_k127_6290481_1 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009532 395.0
BYD3_k127_6290481_2 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003452 274.0
BYD3_k127_6290481_3 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 0.000000000000000000000000000004316 121.0
BYD3_k127_6292412_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005509 474.0
BYD3_k127_6292412_1 COG0791 Cell wall-associated hydrolases (invasion-associated proteins) K01183,K13695,K19303 GO:0000270,GO:0003674,GO:0003824,GO:0004175,GO:0006022,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0009254,GO:0016787,GO:0019538,GO:0030203,GO:0043170,GO:0044238,GO:0070011,GO:0071704,GO:0140096,GO:1901135,GO:1901564 3.2.1.14 0.000000000000000000000000000101 121.0
BYD3_k127_6294078_0 Lysin motif K08307 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0008150,GO:0008932,GO:0008933,GO:0009893,GO:0016020,GO:0016740,GO:0016757,GO:0019222,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043085,GO:0044093,GO:0044464,GO:0048518,GO:0050789,GO:0050790,GO:0051341,GO:0051353,GO:0061783,GO:0065007,GO:0065009 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001447 436.0
BYD3_k127_6294078_1 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid K01069 - 3.1.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001808 276.0
BYD3_k127_6294078_2 Methyltransferase domain - - - 0.00000001143 61.0
BYD3_k127_6294268_0 TonB dependent receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002421 439.0
BYD3_k127_6294268_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002524 293.0
BYD3_k127_6294448_0 Aldo/keto reductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000224 397.0
BYD3_k127_6294448_1 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001381 367.0
BYD3_k127_6294448_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002885 262.0
BYD3_k127_6294448_3 Transcriptional regulator K07506 - - 0.00000000000000000000000000000000000000000000000000000000000007589 223.0
BYD3_k127_6294448_4 PFAM Amino acid-binding ACT K03567 - - 0.00000000000000000000000000000000000000001062 160.0
BYD3_k127_6296447_0 FAD dependent oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005476 321.0
BYD3_k127_6296447_1 Asparaginase, N-terminal K01424 - 3.5.1.1 0.000000000000000000000000000000000000000000000000000001423 198.0
BYD3_k127_6312674_0 Enoyl-(Acyl carrier protein) reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000004023 240.0
BYD3_k127_6312674_1 AMP-binding enzyme - - - 0.00000000000000000000000000000000000000000000000000000000001828 214.0
BYD3_k127_6314925_0 glutamate synthase K00284 - 1.4.7.1 0.0000000000000000000000000000000000000000000000000000000000000002043 223.0
BYD3_k127_6314925_1 PFAM Peptidoglycan-binding domain 1 protein - - - 0.00000000000000000000000000000000003856 146.0
BYD3_k127_6314925_2 - - - - 0.000004376 55.0
BYD3_k127_6318453_0 COG1593 TRAP-type C4-dicarboxylate transport system large permease component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001145 598.0
BYD3_k127_6318453_1 Adenylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001424 407.0
BYD3_k127_6318453_2 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.0000000000000000000000000000000000000000000000000000000000002116 214.0
BYD3_k127_6318453_3 Tripartite ATP-independent periplasmic transporter, DctQ K21394 - - 0.00000000000000000000000000000000004041 141.0
BYD3_k127_6318799_0 CPA1 family monovalent cation H antiporter K03316 - - 8.63e-212 672.0
BYD3_k127_6318799_1 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.0000000000000000000000000000000000000000000000000000000001129 211.0
BYD3_k127_6318799_2 Bacterial protein of unknown function (DUF924) - - - 0.00000000000000000002579 91.0
BYD3_k127_6327365_0 Major Facilitator - - - 6.277e-234 736.0
BYD3_k127_6327365_1 COG0488 ATPase components of ABC transporters with duplicated ATPase domains K06158 GO:0000166,GO:0003674,GO:0005488,GO:0005524,GO:0008144,GO:0017076,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0097159,GO:0097367,GO:1901265,GO:1901363 - 2.919e-225 715.0
BYD3_k127_6327365_2 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000000000000000000000002591 191.0
BYD3_k127_6328042_0 Domain of unknown function (DUF4070) - - - 7.579e-202 637.0
BYD3_k127_6328042_1 PFAM transport-associated K04065 - - 0.000000000000000000000000000000000000000000413 159.0
BYD3_k127_6328042_2 Protein of unknown function (DUF3309) - - - 0.0000000000000000004848 88.0
BYD3_k127_6328042_3 Belongs to the UPF0337 (CsbD) family - - - 0.000000000000000006533 87.0
BYD3_k127_6331976_0 cAMP biosynthetic process K03641 - - 0.000000000000000000000000000000000000000000000000113 191.0
BYD3_k127_6331976_1 determination of stomach left/right asymmetry - - - 0.0000000000002243 74.0
BYD3_k127_6333277_0 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002745 344.0
BYD3_k127_6333277_1 Glutamine amidotransferase class-I - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002717 306.0
BYD3_k127_6333277_2 Acyl-ACP thioesterase K07107 - - 0.000000000000000000000000000000000000003836 153.0
BYD3_k127_6344397_0 Spermine/spermidine synthase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006107 335.0
BYD3_k127_6344397_1 Spermidine synthase - - - 0.000000000000000000000000000000004387 133.0
BYD3_k127_6344397_2 Asparagine synthase, glutamine-hydrolyzing K01953 - 6.3.5.4 0.000695 46.0
BYD3_k127_635410_0 Asparagine synthase, glutamine-hydrolyzing K01953 - 6.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001229 376.0
BYD3_k127_635410_1 Glycosyl transferase 4-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008725 372.0
BYD3_k127_635410_2 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000048 222.0
BYD3_k127_6361238_0 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000000000000000000000000000005162 235.0
BYD3_k127_6361238_1 Histidine kinase K13924 - 2.1.1.80,3.1.1.61 0.00000000000000000000000000000000000000000000000000000000000000125 246.0
BYD3_k127_6361238_2 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000001394 165.0
BYD3_k127_6361387_0 Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second K01958 - 6.4.1.1 0.0 1059.0
BYD3_k127_6388919_0 helix_turn_helix gluconate operon transcriptional repressor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003439 407.0
BYD3_k127_6388919_1 Aminotransferase class I and II - - - 0.000000000000000000000000000000000000000000000000000000000000000000001561 241.0
BYD3_k127_6388919_2 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000001934 189.0
BYD3_k127_6389309_0 GHMP kinases N terminal domain K07031 - 2.7.1.168 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001414 271.0
BYD3_k127_6389309_1 Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction K02377 - 1.1.1.271 0.000000000000000000000000000000000000000000000000000000008789 201.0
BYD3_k127_6389309_2 NUDIX domain - - - 0.0000000000000000000000000000000003818 138.0
BYD3_k127_6392209_0 Alkaline phosphatase K01113 - 3.1.3.1 1.531e-270 848.0
BYD3_k127_6392209_1 Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH K00033 - 1.1.1.343,1.1.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001821 341.0
BYD3_k127_6392209_2 Methionine biosynthesis protein MetW - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002056 312.0
BYD3_k127_6392209_3 Bacterial protein of unknown function (DUF885) - - - 0.0000000000000000000000000000000000000000000000000000000006547 222.0
BYD3_k127_6392209_4 Putative adhesin - - - 0.0000000000000000000000000000000000000000731 166.0
BYD3_k127_6397154_0 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 5.024e-217 701.0
BYD3_k127_6397154_1 glycyl-tRNA synthetase alpha subunit K01878 - 6.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001124 501.0
BYD3_k127_6397154_2 TIGRFAM glutamine synthetase, type I K01915 - 6.3.1.2 0.0000000000000000000000000000000000000000000000000000000000004175 216.0
BYD3_k127_6397154_3 PFAM Phospholipid glycerol acyltransferase K00655 - 2.3.1.51 0.000000000000000000000000000000000000000000000000003439 188.0
BYD3_k127_6404942_0 CHASE3 domain K05962 - 2.7.13.1 0.000000000000000000000000000000000000000000000000000000000000000000000000002718 273.0
BYD3_k127_6404942_2 BON domain - - - 0.0003683 45.0
BYD3_k127_6416452_0 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001233 393.0
BYD3_k127_6416452_1 FtsX-like permease family K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003147 368.0
BYD3_k127_6446897_0 Belongs to the peptidase S1C family K04771,K04772 - 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002478 424.0
BYD3_k127_6446897_1 Putative aminopeptidase - - - 0.000000000000000000000000000000000000000000000681 172.0
BYD3_k127_6454882_0 COG0643 Chemotaxis protein histidine kinase and related kinases K02487,K06596 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003136 288.0
BYD3_k127_6454882_1 chemotaxis K02660 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007376 267.0
BYD3_k127_6481616_0 COG1902 NADH flavin oxidoreductases, Old Yellow Enzyme family K00219 - 1.3.1.34 1.91e-210 665.0
BYD3_k127_6481616_1 PFAM acyl-CoA dehydrogenase domain protein K00249 - 1.3.8.7 0.00000000000000000000000000000000000000000000000000000000000000000004293 234.0
BYD3_k127_6481616_2 Aminotransferase class-V - - - 0.00000000000000000000000000000000000006613 152.0
BYD3_k127_648537_0 COG1629 Outer membrane receptor proteins, mostly Fe transport K02014 - - 1.465e-234 752.0
BYD3_k127_648537_1 Peptidase dimerisation domain K01436 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002257 550.0
BYD3_k127_648537_2 Hydantoinase/oxoprolinase N-terminal region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002694 554.0
BYD3_k127_648537_3 Protein of unknown function (DUF917) K09703 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006513 411.0
BYD3_k127_648537_4 helix_turn_helix, Lux Regulon K03556 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008444 432.0
BYD3_k127_648537_5 Transcriptional regulator K05372 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000516 306.0
BYD3_k127_648537_6 Bacterial protein of unknown function (DUF899) - - - 0.000000000000000000000000000000000000000000004623 169.0
BYD3_k127_648537_7 Bacterial protein of unknown function (DUF899) - - - 0.0000000000000000000005079 96.0
BYD3_k127_649200_0 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001327 357.0
BYD3_k127_649200_1 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001069 305.0
BYD3_k127_649200_2 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 GO:0003674,GO:0003824,GO:0005488,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008194,GO:0008289,GO:0008610,GO:0008654,GO:0008915,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016020,GO:0016051,GO:0016740,GO:0016757,GO:0016758,GO:0019637,GO:0019897,GO:0019898,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0046467,GO:0046493,GO:0071704,GO:0071944,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.4.1.182 0.0000000000000000000000000000000000000000000000000000000000000000000002202 243.0
BYD3_k127_649200_3 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 - 4.2.1.59 0.0000000000000000000000000000000000000000000000000001894 192.0
BYD3_k127_649200_4 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K07277 - - 0.0000000000000000000000000000000000000000000001789 177.0
BYD3_k127_649200_5 Belongs to the skp family K06142 - - 0.0000000000000000000000000000001524 131.0
BYD3_k127_6498676_0 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 3.402e-256 816.0
BYD3_k127_6498676_1 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K01139 - 2.7.6.5,3.1.7.2 4.495e-241 758.0
BYD3_k127_6498676_2 Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate K03179 - 2.5.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003722 351.0
BYD3_k127_6498676_3 Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism K01012 GO:0003674,GO:0003824,GO:0004076,GO:0005488,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009987,GO:0016053,GO:0016740,GO:0016782,GO:0016783,GO:0017144,GO:0018130,GO:0019752,GO:0032787,GO:0034641,GO:0042364,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051537,GO:0051539,GO:0051540,GO:0070283,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.8.1.6 0.00000000000000000000000000000000000000000000000000000000000002785 218.0
BYD3_k127_6498676_4 competence protein - - - 0.0000000000000000000000000000000000000000000000000000000061 207.0
BYD3_k127_6498676_5 PFAM Endoribonuclease L-PSP K09022 - 3.5.99.10 0.000000000000000000000000000000000000000000000005497 177.0
BYD3_k127_6498676_6 Domain of unknown function (DUF4410) - - - 0.000000000000000000000000000004735 128.0
BYD3_k127_6500276_0 Aldehyde dehydrogenase family - - - 1.344e-204 645.0
BYD3_k127_6500276_1 alcohol dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008098 505.0
BYD3_k127_6500276_2 Glutamine synthetase, catalytic domain K01915 - 6.3.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006268 452.0
BYD3_k127_6500276_3 Multidrug efflux pump K03327 GO:0003674,GO:0005215,GO:0006810,GO:0006855,GO:0008150,GO:0015238,GO:0015893,GO:0022857,GO:0042221,GO:0042493,GO:0042891,GO:0042895,GO:0046677,GO:0050896,GO:0051179,GO:0051234,GO:0055085 - 0.0000000000000000001343 90.0
BYD3_k127_650151_0 Transferrin receptor-like dimerisation domain K01301 - 3.4.17.21 5.235e-241 756.0
BYD3_k127_650151_1 dioxygenase of extradiol dioxygenase family K06991 - - 0.000000000000000000000000000000000000000000000000000000000000004883 218.0
BYD3_k127_650151_2 PFAM Cupin 2, conserved barrel domain protein - - - 0.00000000002351 68.0
BYD3_k127_6502127_0 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001919 277.0
BYD3_k127_6503392_0 Amidohydrolase family K06015 - 3.5.1.81 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001115 404.0
BYD3_k127_6503392_1 Protein of unknown function (DUF2891) - - - 0.00000000000000000000000000000006092 127.0
BYD3_k127_6505185_0 Zn-dependent hydrolases of the beta-lactamase fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000244 471.0
BYD3_k127_6505185_1 Methyl-accepting chemotaxis protein (MCP) signalling domain K03406,K05875 - - 0.000000000000000000000000000000000000000000000000000000000000000001148 239.0
BYD3_k127_6505185_2 thiol-disulphide oxidoreductase DCC - - - 0.000000000000000000000000000000000000000004889 158.0
BYD3_k127_6505185_3 fatty acid desaturase - - - 0.000000000002293 77.0
BYD3_k127_6505365_0 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006214 510.0
BYD3_k127_6505365_1 Inorganic pyrophosphatase K01507 - 3.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002301 287.0
BYD3_k127_6505365_2 Transcriptional regulator K13572 - - 0.0000000000000000000000000000000000000000000000000000000000000009543 233.0
BYD3_k127_6505365_3 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis K00759 - 2.4.2.7 0.0000000000000000000000000000000000000000000002726 173.0
BYD3_k127_6505365_4 ABC transporter K02003 - - 0.000000000000008896 83.0
BYD3_k127_6517395_0 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 6.53e-302 939.0
BYD3_k127_6517395_1 two-component system sensor protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004346 531.0
BYD3_k127_6517395_2 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000001708 87.0
BYD3_k127_6517623_0 PFAM Acyl-CoA thioester hydrolase BAAT N-terminal region, BAAT Acyl-CoA thioester hydrolase C terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007905 287.0
BYD3_k127_6517623_2 CHAT domain - - - 0.0002814 53.0
BYD3_k127_6521071_0 transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001777 257.0
BYD3_k127_6521071_1 SpoVR like protein K06415 - - 0.0000000000000000000000000000000000000000000000000000000000000004029 224.0
BYD3_k127_6521071_2 NmrA family - - - 0.00000000000000000000000000000000000001749 156.0
BYD3_k127_6523046_0 Zn-dependent dipeptidase, microsomal dipeptidase K01273 - 3.4.13.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001758 366.0
BYD3_k127_6523046_1 PFAM Amidohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001111 359.0
BYD3_k127_6523046_2 - - - - 0.00000000000000000000000000000000000000000000000000006723 200.0
BYD3_k127_6523046_3 aminopeptidase N - - - 0.00002689 56.0
BYD3_k127_652309_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296,K18138 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007704 608.0
BYD3_k127_652309_1 Belongs to the cysteine synthase cystathionine beta- synthase family K01738 - 2.5.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101 479.0
BYD3_k127_652309_2 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 GO:0003674,GO:0003824,GO:0016740,GO:0016757 2.4.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007428 479.0
BYD3_k127_652309_3 Barrel-sandwich domain of CusB or HlyD membrane-fusion K03585 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001019 291.0
BYD3_k127_652309_4 synthesis repressor, PhaR - - - 0.0000000000000000000000000002057 120.0
BYD3_k127_6525907_0 Dehydrogenase E1 component K00164 GO:0003674,GO:0003824,GO:0004591,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016491,GO:0016624,GO:0016903,GO:0016999,GO:0017144,GO:0019752,GO:0032991,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045239,GO:0045240,GO:0045252,GO:0045333,GO:0055114,GO:0071704,GO:0072350,GO:1902494,GO:1990204,GO:1990234 1.2.4.2 0.0 1095.0
BYD3_k127_6525907_1 dTDP biosynthetic process K00560,K00943 - 2.1.1.45,2.7.4.9 0.0000000000000000000000000000000000000000000000000000001058 216.0
BYD3_k127_6525907_2 Bacterial transferase hexapeptide (six repeats) K00640 - 2.3.1.30 0.00000000000000008497 94.0
BYD3_k127_6525907_3 COG2148 Sugar transferases involved in lipopolysaccharide synthesis K03606 - - 0.00000000000001957 73.0
BYD3_k127_6525972_0 alpha amylase catalytic K05343 - 3.2.1.1,5.4.99.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005352 454.0
BYD3_k127_6525972_1 Radical SAM superfamily K04069 - 1.97.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000009987 280.0
BYD3_k127_6525972_2 Belongs to the MEMO1 family K06990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001417 262.0
BYD3_k127_6525972_3 pfam ammecr1 K09141 - - 0.00000000000000000000000000000000000000002355 162.0
BYD3_k127_6532749_0 Belongs to the heme-copper respiratory oxidase family K00404 - 1.9.3.1 2.369e-258 801.0
BYD3_k127_6532749_1 Protein of unknown function (DUF3570) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007537 391.0
BYD3_k127_6532749_2 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001762 320.0
BYD3_k127_6532749_3 Sulfatase-modifying factor enzyme 1 - - - 0.000000000000000000000000000000000000000000000000001629 186.0
BYD3_k127_6532749_4 SCO1/SenC K07152 - - 0.00000000000000000000000000000000000000479 158.0
BYD3_k127_6532749_5 Redoxin - - - 0.000000000000000000000000000000000006902 143.0
BYD3_k127_6533208_0 PTS system, glucose subfamily, IIA K11189 - - 4.799e-205 657.0
BYD3_k127_6533208_1 phosphotransferase system, EIIB K02803,K02804 - 2.7.1.193 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004545 419.0
BYD3_k127_653356_0 transport system involved in gliding motility, auxiliary component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001109 540.0
BYD3_k127_653356_1 COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005642 360.0
BYD3_k127_653356_2 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008753 315.0
BYD3_k127_653356_3 lipolytic protein G-D-S-L family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007369 308.0
BYD3_k127_653356_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002432 258.0
BYD3_k127_653356_5 Domain of unknown function (DUF4340) - - - 0.00000000000000000000000000000000000000000856 168.0
BYD3_k127_653356_6 Permease YjgP YjgQ K11720 - - 0.0000000000000000000000000000000000002712 149.0
BYD3_k127_653356_7 pfam rdd - - - 0.000000000000000000000000000001044 134.0
BYD3_k127_6535867_0 asparagine synthase K01953 - 6.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002657 354.0
BYD3_k127_6535867_1 Heparinase II/III N-terminus - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004964 271.0
BYD3_k127_6537324_0 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002674 284.0
BYD3_k127_6537324_1 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 - - 0.00000000000000000000000000000000000000000000000000000000000000114 222.0
BYD3_k127_6537324_2 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation K03117 - - 0.00000000001233 70.0
BYD3_k127_6537324_3 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 GO:0002790,GO:0006810,GO:0008104,GO:0008150,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0032940,GO:0033036,GO:0042886,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0071702,GO:0071705 - 0.00000000004738 68.0
BYD3_k127_6542843_0 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001395 350.0
BYD3_k127_6542843_1 COG0303 Molybdopterin biosynthesis enzyme K03750,K07219 - 2.10.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004945 320.0
BYD3_k127_655038_0 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 - 4.2.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003287 477.0
BYD3_k127_655038_1 TIGRFAM diguanylate cyclase (GGDEF) domain K21023 - 2.7.7.65 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009915 423.0
BYD3_k127_655038_2 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003566 321.0
BYD3_k127_655038_3 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.0000000000000000000000000000000000000000000000000000000002165 214.0
BYD3_k127_655038_4 - - - - 0.00000000000001725 80.0
BYD3_k127_6559415_0 protease with the C-terminal PDZ domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006756 382.0
BYD3_k127_6559415_1 Oxidoreductase family, NAD-binding Rossmann fold K09949 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003144 354.0
BYD3_k127_6563127_0 PFAM type I phosphodiesterase nucleotide pyrophosphatase - - - 6.486e-229 740.0
BYD3_k127_6563127_1 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001262 522.0
BYD3_k127_6563127_2 epimerase - - - 0.00000000000000000000000000000000000000000000000000006634 190.0
BYD3_k127_6563127_3 Protein conserved in bacteria K07011 - - 0.00000000000000000000000000000000000004268 166.0
BYD3_k127_6563127_4 - - - - 0.00000000000000000000000001588 119.0
BYD3_k127_6563127_5 - - - - 0.0000000000000006346 79.0
BYD3_k127_6563127_6 Sulfatase - - - 0.000000000000001029 86.0
BYD3_k127_65664_0 DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase K14162 - 2.7.7.7 0.0 1107.0
BYD3_k127_65664_1 Nucleotidyltransferase DNA polymerase involved in DNA repair K14161 - - 0.0000000000000000000000000000000000000000000000000000000000000000000005951 248.0
BYD3_k127_65664_2 - - - - 0.000001612 50.0
BYD3_k127_6570025_0 TonB-dependent Receptor Plug Domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008683 425.0
BYD3_k127_6570025_1 Protein involved in meta-pathway of phenol degradation - - - 0.000000000000000000000000000000000000000000000000000000001 210.0
BYD3_k127_6570025_2 Domain of unknown function (DUF4440) - - - 0.0000000000000000000000989 103.0
BYD3_k127_6570364_0 Flagellar hook protein FlgE K02390 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000025 497.0
BYD3_k127_6570364_1 TIGRFAM flagellar basal-body rod protein FlgF K02391 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006118 273.0
BYD3_k127_6570364_2 Belongs to the flagella basal body rod proteins family K02388 - - 0.000000000000000000000000000000000000000000001159 168.0
BYD3_k127_6570364_3 Required for flagellar hook formation. May act as a scaffolding protein K02389 - - 0.000000000000000000000000000000000000000000001635 172.0
BYD3_k127_6576352_0 TonB-dependent Receptor Plug K16092 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000209 328.0
BYD3_k127_6576352_1 Aminotransferase class I and II K02225 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000008059 258.0
BYD3_k127_6584576_0 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008038 402.0
BYD3_k127_6584576_1 cation diffusion facilitator family transporter K16264 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001352 317.0
BYD3_k127_6584576_2 Glycosyl transferase family 2 K00721 - 2.4.1.83 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005382 282.0
BYD3_k127_6584576_3 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K03527 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016491,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0032787,GO:0042380,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046490,GO:0048037,GO:0051536,GO:0051538,GO:0051540,GO:0055114,GO:0071704,GO:0090407,GO:1901135,GO:1901576 1.17.7.4 0.0000000000000000000000000000000000000000000000000000000005585 204.0
BYD3_k127_6584576_4 Domain of unknown function (DUF374) - - - 0.00000000000000000000000000000000000000000001742 171.0
BYD3_k127_6584576_5 belongs to the Fur family K09826 - - 0.000000000000000000000000000001057 125.0
BYD3_k127_6584576_6 Type II transport protein GspH K08084 - - 0.0000000000000000000000001559 113.0
BYD3_k127_6584576_7 Prokaryotic N-terminal methylation motif K02671 - - 0.00007694 53.0
BYD3_k127_6590474_0 TrkA-C domain - - - 2.315e-239 752.0
BYD3_k127_6590474_1 Cupin domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007631 336.0
BYD3_k127_6590474_2 Copper/zinc superoxide dismutase (SODC) - - - 0.0000000000000000000000000000000000000000000001221 176.0
BYD3_k127_6592579_0 CHASE3 domain - - - 3.68e-317 1010.0
BYD3_k127_6592579_1 PFAM Activator of Hsp90 ATPase - - - 0.0000000000000000000000000000000000000000000009636 169.0
BYD3_k127_6595634_0 Melibiase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004815 518.0
BYD3_k127_6595634_1 Major facilitator Superfamily - - - 0.0000000000000000000000000002602 119.0
BYD3_k127_6601705_0 phosphorelay signal transduction system K03556 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005396 509.0
BYD3_k127_6601705_1 glyoxalase bleomycin resistance protein dioxygenase - - - 0.00000000000000000000000000000000000000000001887 162.0
BYD3_k127_661169_0 Lytic murein transglycosylase K08309 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009201 588.0
BYD3_k127_661457_0 Peptidase dimerisation domain - - - 1.271e-237 749.0
BYD3_k127_661457_1 N-acetylphosphatidylethanolamine-hydrolysing phospholipas activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005007 389.0
BYD3_k127_661457_2 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006608 362.0
BYD3_k127_661457_3 Peptidoglycan-binding domain 1 protein - - - 0.0000000000000000000001068 107.0
BYD3_k127_6617883_0 COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases K20940 - 1.14.13.218 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004816 514.0
BYD3_k127_6617883_1 Protein of unknown function (DUF5131) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002064 275.0
BYD3_k127_6617883_2 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K07303 - 1.3.99.16 0.0000000000000000000000008518 105.0
BYD3_k127_6617883_3 Protein of unknown function (DUF5131) - - - 0.0000000000000000000006731 102.0
BYD3_k127_6617883_4 DUF167 K09131 - - 0.00000000000000000001508 93.0
BYD3_k127_662619_0 Major Facilitator Superfamily K19577 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001853 282.0
BYD3_k127_662619_1 N-terminal domain of Peptidase_S41 in eukaryotic IRBP - - - 0.00000000000000000000000000000000000000000000000000007322 204.0
BYD3_k127_662619_2 Methyltransferase, chemotaxis proteins K00575,K13924 - 2.1.1.80,3.1.1.61 0.0000000000000000000000000000000000000003417 157.0
BYD3_k127_662619_3 acetyltransferase K22441 - 2.3.1.57 0.0000000000000000000000000000000000002204 145.0
BYD3_k127_6641191_0 Bacterial protein of unknown function (DUF885) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001752 552.0
BYD3_k127_6641191_1 Glucose dehydrogenase K00117,K05358 - 1.1.5.2,1.1.5.8 0.0000000000000000000000000000000000000000000000000000000000001138 220.0
BYD3_k127_6650430_0 AMP-binding enzyme C-terminal domain K01895 - 6.2.1.1 4.807e-203 643.0
BYD3_k127_6650430_1 Bacterial transcriptional activator domain - - - 0.000000000000000000000000001203 115.0
BYD3_k127_665270_0 Beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000559 350.0
BYD3_k127_665270_1 - K01286 - 3.4.16.4 0.000000000000000000000000000000002577 141.0
BYD3_k127_6653696_0 Domain of unknown function (DUF4331) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002336 331.0
BYD3_k127_6653696_1 Insecticide toxin TcdB middle/N-terminal region - - - 0.0000000000000004263 88.0
BYD3_k127_6653696_2 Tetratricopeptide repeat - - - 0.00002086 53.0
BYD3_k127_665884_0 DNA polymerase III, delta subunit K02340 GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009360,GO:0009987,GO:0032991,GO:0034641,GO:0034645,GO:0042575,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0061695,GO:0071704,GO:0090304,GO:1901360,GO:1901576,GO:1902494,GO:1990234 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006595 290.0
BYD3_k127_665884_1 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 GO:0003674,GO:0003824,GO:0004719,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0010340,GO:0016740,GO:0016741,GO:0019538,GO:0032259,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0051998,GO:0071704,GO:0140096,GO:1901564 2.1.1.77 0.00000000000000000008186 93.0
BYD3_k127_665884_2 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.000000000000002502 78.0
BYD3_k127_6696142_0 4-hydroxyphenylpyruvate dioxygenase K00457 - 1.13.11.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000194 619.0
BYD3_k127_6696142_1 COG0028 Thiamine pyrophosphate-requiring enzymes acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase K01652 - 2.2.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007141 515.0
BYD3_k127_6696142_2 HMGL-like K01640 - 4.1.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003111 439.0
BYD3_k127_6696142_3 Xylose isomerase-like TIM barrel - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006105 295.0
BYD3_k127_6696142_4 transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000739 241.0
BYD3_k127_671956_0 Belongs to the aldehyde dehydrogenase family K00128,K09472 - 1.2.1.3,1.2.1.99 0.0000000000000000000000000000000000000000000000000000000000000000000000001699 255.0
BYD3_k127_671956_1 TonB dependent receptor - - - 0.000000000000000000000003937 113.0
BYD3_k127_6742354_0 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 GO:0000027,GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005515,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006996,GO:0008150,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0022607,GO:0022613,GO:0022618,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0032794,GO:0034622,GO:0035639,GO:0036094,GO:0042254,GO:0042255,GO:0042273,GO:0043021,GO:0043022,GO:0043023,GO:0043167,GO:0043168,GO:0043933,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:0097159,GO:0097216,GO:0097367,GO:1901265,GO:1901363 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001318 572.0
BYD3_k127_6742354_1 Transfers a succinyl group from succinyl-CoA to L- serine, forming succinyl-L-serine K00641 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004414,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008374,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009069,GO:0009086,GO:0009092,GO:0009987,GO:0016053,GO:0016407,GO:0016413,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.3.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001258 435.0
BYD3_k127_6742354_2 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K17713 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0008104,GO:0008150,GO:0008152,GO:0009279,GO:0009987,GO:0016020,GO:0016043,GO:0016491,GO:0019867,GO:0022607,GO:0030312,GO:0030313,GO:0031224,GO:0031230,GO:0031241,GO:0031246,GO:0031975,GO:0032991,GO:0033036,GO:0034613,GO:0042802,GO:0043163,GO:0043165,GO:0044085,GO:0044091,GO:0044425,GO:0044462,GO:0044464,GO:0045184,GO:0045229,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0055114,GO:0061024,GO:0070727,GO:0071709,GO:0071840,GO:0071944,GO:0072657,GO:0090150,GO:0098552,GO:0098796,GO:1990063 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002676 295.0
BYD3_k127_6742354_3 COG0739 Membrane proteins related to metalloendopeptidases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002158 264.0
BYD3_k127_6742354_4 protein conserved in bacteria - - - 0.000000000000000000000000000005237 128.0
BYD3_k127_6742354_5 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0004529,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006259,GO:0006308,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008855,GO:0009056,GO:0009057,GO:0009318,GO:0009987,GO:0016787,GO:0016788,GO:0016796,GO:0016895,GO:0019439,GO:0032991,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901361,GO:1901575,GO:1902494 3.1.11.6 0.000001395 51.0
BYD3_k127_6758180_0 Phosphotransferase enzyme family - - - 0.0000000000000000000000000000000000000000000000000000000000004674 216.0
BYD3_k127_6758180_1 conserved protein UCP033924 - - - 0.000000000000000000000000000000000000000000000001172 178.0
BYD3_k127_6758180_2 XdhC and CoxI family - - - 0.000000000000000000000004708 104.0
BYD3_k127_6758180_3 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.00000000007907 70.0
BYD3_k127_6759357_0 Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon K03524 GO:0000166,GO:0000976,GO:0000984,GO:0001017,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003824,GO:0004077,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0006082,GO:0006464,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009305,GO:0009374,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0017053,GO:0017076,GO:0017144,GO:0018130,GO:0018271,GO:0019538,GO:0019752,GO:0019842,GO:0030554,GO:0031406,GO:0032553,GO:0032555,GO:0032559,GO:0032787,GO:0032991,GO:0033218,GO:0033293,GO:0034641,GO:0035639,GO:0036094,GO:0036211,GO:0042364,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043565,GO:0043603,GO:0043604,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0046983,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901681,GO:1990837 6.3.4.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003736 278.0
BYD3_k127_6759357_1 Amidinotransferase - - - 0.0000000000000000000000000000000000000000000000000002887 189.0
BYD3_k127_6759357_2 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.0000000000000000000000000000000000000000000000005837 186.0
BYD3_k127_6759357_3 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.000000000000000000000000000000000000000004275 164.0
BYD3_k127_6759357_4 - - - - 0.0000000000000000000000000001507 131.0
BYD3_k127_6759357_5 - - - - 0.0000000000000000000001197 107.0
BYD3_k127_6788389_0 LysE type translocator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003112 281.0
BYD3_k127_6788389_1 ASCH - - - 0.000000000000000000000000000002481 133.0
BYD3_k127_6788389_2 carboxylic ester hydrolase activity - - - 0.000000000000000006309 88.0
BYD3_k127_6788389_3 Protein conserved in bacteria - - - 0.00000000000000001128 94.0
BYD3_k127_6817283_0 Serine aminopeptidase, S33 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002251 397.0
BYD3_k127_6817283_1 endoribonuclease L-PSP - - - 0.000000000000000000000000000000000000000000000002261 178.0
BYD3_k127_6819591_0 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K07497 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003104 589.0
BYD3_k127_6819591_1 Domain of unknown function (DUF4252) - - - 0.000000000000000000000000001394 118.0
BYD3_k127_6819591_2 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000003779 76.0
BYD3_k127_6819883_0 Peptidase dimerisation domain K13049 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008401 427.0
BYD3_k127_6819883_1 Alpha beta hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000861 275.0
BYD3_k127_6819883_2 MerR, DNA binding K13639 - - 0.0000000000000000000000000000000000000000000000000000000000000000009363 229.0
BYD3_k127_6819883_3 gag-polyprotein putative aspartyl protease - - - 0.00001155 52.0
BYD3_k127_6822008_0 FAD linked K00102 GO:0000166,GO:0003674,GO:0003824,GO:0004457,GO:0004458,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006082,GO:0006089,GO:0006091,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0015980,GO:0016053,GO:0016491,GO:0016614,GO:0016898,GO:0019249,GO:0019516,GO:0019752,GO:0022900,GO:0022904,GO:0030447,GO:0032787,GO:0036094,GO:0040007,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045333,GO:0046394,GO:0048037,GO:0050660,GO:0050662,GO:0051990,GO:0055114,GO:0071704,GO:0071949,GO:0072330,GO:0097159,GO:0099615,GO:1901265,GO:1901363,GO:1901576,GO:1901615,GO:1901617 1.1.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000704 508.0
BYD3_k127_6822008_1 Bacterial protein of unknown function (DUF839) K07093 - - 0.00000000000000000000000000005513 118.0
BYD3_k127_6822008_2 Belongs to the peptidase M48B family K03799 - - 0.00000000000000000000003456 99.0
BYD3_k127_6826082_0 Amino acid permease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003394 388.0
BYD3_k127_6826082_1 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0006107,GO:0006108,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009060,GO:0009117,GO:0009987,GO:0015980,GO:0016491,GO:0016614,GO:0016615,GO:0016616,GO:0016999,GO:0017144,GO:0019362,GO:0019637,GO:0019674,GO:0019752,GO:0030060,GO:0034641,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044464,GO:0045333,GO:0046483,GO:0046496,GO:0051186,GO:0055086,GO:0055114,GO:0071704,GO:0072350,GO:0072524,GO:1901360,GO:1901564 1.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003847 374.0
BYD3_k127_6829016_0 Peptidase family M48 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001311 387.0
BYD3_k127_6831404_0 5TMR of 5TMR-LYT - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003002 262.0
BYD3_k127_6831404_1 BAAT / Acyl-CoA thioester hydrolase C terminal K01061 - 3.1.1.45 0.0000000000000000000000000000000000000000000000000000000001215 206.0
BYD3_k127_6831859_0 Belongs to the ATCase OTCase family K09065,K13043 GO:0000050,GO:0003674,GO:0003824,GO:0004585,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0016743,GO:0019627,GO:0019752,GO:0034641,GO:0042450,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.3.11,2.1.3.9 0.000000000000000000000000000000000000000000000000000000000000000000008399 252.0
BYD3_k127_6831859_1 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 GO:0003674,GO:0003824,GO:0003991,GO:0005488,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016597,GO:0016740,GO:0016772,GO:0016774,GO:0019752,GO:0031406,GO:0034618,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.8 0.000000000000000000000000000000000000000000000003315 180.0
BYD3_k127_6831859_2 PFAM Aminotransferase class-III K00821 - 2.6.1.11,2.6.1.17 0.0000000000000000000000000000000000000000008664 162.0
BYD3_k127_683292_0 Prolyl oligopeptidase family - - - 2.311e-273 858.0
BYD3_k127_683292_1 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001851 426.0
BYD3_k127_683292_2 pyrroloquinoline quinone binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001054 328.0
BYD3_k127_683292_3 Glutathione S-transferase, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000005722 233.0
BYD3_k127_683292_4 Cytochrome c - - - 0.000000000000000000000000000000000000000000000000000000000001176 220.0
BYD3_k127_683292_5 Transcriptional regulatory protein, C terminal - - - 0.00000000000000000000000000000000000000000000000000003269 196.0
BYD3_k127_683292_6 ECF sigma factor - - - 0.0000000000000000000000000000000000000000000000004736 181.0
BYD3_k127_683292_7 Transcriptional regulatory protein, C terminal - - - 0.000000000000000000000000000000009105 138.0
BYD3_k127_683292_8 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000001619 61.0
BYD3_k127_6835559_0 PFAM Short-chain dehydrogenase reductase SDR - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003575 383.0
BYD3_k127_6835559_1 Peptidyl-prolyl cis-trans isomerase K01802,K03772,K03773 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000008947 239.0
BYD3_k127_6835559_2 Thiol disulfide interchange protein K03673 - - 0.0000000000000000000000000000000000000000000000001719 183.0
BYD3_k127_6835909_0 Alpha/beta hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001984 285.0
BYD3_k127_6835909_1 TamB, inner membrane protein subunit of TAM complex K09800 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003824 271.0
BYD3_k127_6835909_2 Hydrolase of X-linked nucleoside diphosphate N terminal - - - 0.000000000000000000000000000000000006912 138.0
BYD3_k127_683595_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001309 284.0
BYD3_k127_683595_1 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases K10914 - - 0.00000000000000000000000000000000000000000000000000000000009569 212.0
BYD3_k127_683595_2 Beta-lactamase - - - 0.0000000000000000000000000000000000000000000001961 182.0
BYD3_k127_683595_3 - - - - 0.00000000000000003224 92.0
BYD3_k127_6837625_0 General secretion pathway protein J K02459 GO:0002790,GO:0006810,GO:0008104,GO:0008150,GO:0009306,GO:0009987,GO:0015031,GO:0015628,GO:0015833,GO:0032940,GO:0033036,GO:0042886,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0098776 - 0.00000000000000000000000000000000005697 147.0
BYD3_k127_6837625_1 Type II secretion system (T2SS), protein I - - - 0.00000000000000000002187 100.0
BYD3_k127_6837625_2 general secretion pathway protein h K02457 - - 0.0000000005223 67.0
BYD3_k127_6841877_0 peptidase K01354 - 3.4.21.83 3.85e-259 815.0
BYD3_k127_6841877_1 Methyl-accepting chemotaxis protein K03406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003021 340.0
BYD3_k127_6841877_2 4-alpha-glucanotransferase K00705,K06044 - 2.4.1.25,5.4.99.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002839 313.0
BYD3_k127_6841877_3 Prokaryotic cytochrome b561 - - - 0.00000000000000000000000000000000000000000000000000000000000000000787 232.0
BYD3_k127_6841877_4 translation initiation factor activity - - - 0.0000000000000000000000000000000000000001008 154.0
BYD3_k127_6841877_5 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins - - - 0.00000000000000875 88.0
BYD3_k127_6850224_0 Protein tyrosine kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002354 392.0
BYD3_k127_6850224_1 Domain of unknown function (DUF5122) beta-propeller K14274,K21449 - - 0.000000000000000000000000000000000000000000000000000000000001219 239.0
BYD3_k127_6850224_2 electron transfer activity - - - 0.0000000000000000000000000000000000000000000001228 175.0
BYD3_k127_6857433_0 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity K00316 - 1.5.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000239 350.0
BYD3_k127_6857433_1 Subtilase family - - - 0.000000000000000000000000000000000000000000000000002346 192.0
BYD3_k127_6863493_0 Reductase C-terminal K00529,K21738 - 1.18.1.1,1.18.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007975 437.0
BYD3_k127_6863493_1 PFAM Rieske 2Fe-2S domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007105 286.0
BYD3_k127_6863493_2 ferredoxin K04755 - - 0.000000000000000000000002258 109.0
BYD3_k127_6872180_0 Nucleotidyl transferase K00963 - 2.7.7.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003851 365.0
BYD3_k127_6872180_1 TIGRFAM Competence protein ComEA, helix-hairpin-helix K02237 - - 0.0000000000000002768 83.0
BYD3_k127_6872180_2 Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane K19804 - - 0.00000000006828 67.0
BYD3_k127_6874518_0 FtsX-like permease family K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006232 346.0
BYD3_k127_6882886_0 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008424 327.0
BYD3_k127_6886020_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K07303 - 1.3.99.16 3.937e-231 737.0
BYD3_k127_6886020_1 XdhC and CoxI family - - - 0.00000000000000000000000000000000000000000000000000000000000000002028 236.0
BYD3_k127_6886020_2 [2Fe-2S] binding domain - - - 0.000005069 48.0
BYD3_k127_6887615_0 Mechanosensitive ion channel - - - 0.000000000000000000000000000000000000000000000000000000000000008998 235.0
BYD3_k127_6887615_1 Inner membrane component of T3SS, cytoplasmic domain K01990,K21397 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006810,GO:0008150,GO:0015399,GO:0015405,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0030312,GO:0031224,GO:0042623,GO:0042626,GO:0043492,GO:0044424,GO:0044425,GO:0044444,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944 - 0.0000000000001723 82.0
BYD3_k127_6895706_0 COG0154 Asp-tRNAAsn Glu-tRNAGln amidotransferase A subunit and related amidases K01426 - 3.5.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001282 336.0
BYD3_k127_6895706_1 peptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000002907 244.0
BYD3_k127_6910132_0 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 GO:0000107,GO:0003674,GO:0003824,GO:0016740,GO:0016757,GO:0016763 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001932 366.0
BYD3_k127_6910132_1 Histidine biosynthesis bifunctional protein HisB K01089 GO:0000105,GO:0003674,GO:0003824,GO:0004424,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 3.1.3.15,4.2.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007495 318.0
BYD3_k127_6910132_2 Histidine biosynthesis bifunctional protein HisIE K11755 - 3.5.4.19,3.6.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000003357 244.0
BYD3_k127_6910132_3 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.000000000000000000000000000000000000000000000000000000000000000000003863 243.0
BYD3_k127_6910132_4 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.000000000000000000000000000000000000000000000000000000000000000007781 233.0
BYD3_k127_6910132_5 1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase K01814 - 5.3.1.16 0.000000000000000000000000000000000000000000000000000000000000002907 228.0
BYD3_k127_6910132_6 SMP-30/Gluconolaconase/LRE-like region K01053 - 3.1.1.17 0.000000000000000000000000000000000000000000009289 164.0
BYD3_k127_6920643_0 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006755 418.0
BYD3_k127_6920643_1 3-oxoacyl-[acyl-carrier-protein] synthase activity K09458 - 2.3.1.179 0.000000000000000000000000000000000000000000000001231 177.0
BYD3_k127_6928199_0 Pyridoxal-dependent decarboxylase conserved domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002228 556.0
BYD3_k127_6928199_1 - - - - 0.000000000000000000000000000000000000000000000000000007592 201.0
BYD3_k127_6928199_2 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog K03088 - - 0.00000000000000000000000000000006686 133.0
BYD3_k127_6928199_3 COG0457 FOG TPR repeat - - - 0.0000000000000000000000000002983 130.0
BYD3_k127_6928199_4 Putative zinc-finger - - - 0.0002928 51.0
BYD3_k127_6928355_0 ABC transporter transmembrane region K06147,K11085 - - 2.74e-217 689.0
BYD3_k127_6928355_1 transcriptional regulator K13634 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0009314,GO:0009628,GO:0010165,GO:0010212,GO:0042802,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0097159,GO:1901363 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001129 364.0
BYD3_k127_6929062_0 FAD linked oxidase domain protein - - - 0.0 1541.0
BYD3_k127_6929062_1 Belongs to the UPF0502 family K09915 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000122 248.0
BYD3_k127_6929062_2 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.000000000000000000000000000000000000000000000000000000000004869 214.0
BYD3_k127_6937121_0 membrane K07148 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002387 379.0
BYD3_k127_6937121_1 PQQ enzyme repeat K05889,K12132 - 1.1.2.6,2.7.11.1 0.000000000007357 77.0
BYD3_k127_694869_0 FAD binding domain K09828 - 1.3.1.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007864 491.0
BYD3_k127_694869_1 COG0793 Periplasmic protease - - - 0.000000000002177 70.0
BYD3_k127_6948788_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.0 1114.0
BYD3_k127_6948788_1 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.0000000000000000000000000000000000000000000000000000000000000000001198 240.0
BYD3_k127_6948788_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.00000000000000000000000000000000573 134.0
BYD3_k127_696508_0 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007446 333.0
BYD3_k127_696508_1 self proteolysis K03466,K06196,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001546 299.0
BYD3_k127_696508_2 Haemolysin-type calcium-binding repeat (2 copies) K11005 - - 0.00000000002236 75.0
BYD3_k127_6965353_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001086 281.0
BYD3_k127_6965353_1 cytochrome C peroxidase K00428 - 1.11.1.5 0.000000000000000000000000000000000000000000000000000000000001714 221.0
BYD3_k127_6965594_0 TIGRFAM transporter, hydrophobe amphiphile efflux-1 (HAE1) family K18902 - - 2.883e-228 715.0
BYD3_k127_6965594_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K18298 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002146 424.0
BYD3_k127_6965594_2 transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001217 261.0
BYD3_k127_6973071_0 COG0616 Periplasmic serine proteases (ClpP class) K04773 GO:0003674,GO:0003824,GO:0004175,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006465,GO:0006508,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0009987,GO:0010467,GO:0016020,GO:0016021,GO:0016485,GO:0016787,GO:0019538,GO:0031224,GO:0031226,GO:0034641,GO:0043170,GO:0043603,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044425,GO:0044459,GO:0044464,GO:0051604,GO:0070011,GO:0071704,GO:0071944,GO:0140096,GO:1901564 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002469 445.0
BYD3_k127_6987459_0 CoA-transferase family III - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007006 608.0
BYD3_k127_6987459_1 type II secretion system protein E K02283 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001393 524.0
BYD3_k127_6987459_10 - - - - 0.000000000007703 76.0
BYD3_k127_6987459_11 - - - - 0.0000000006485 70.0
BYD3_k127_6987459_2 Belongs to the GSP D family K02280 - - 0.0000000000000000000000000000000000000000000000000000000000000000003528 244.0
BYD3_k127_6987459_3 Caspase domain - - - 0.000000000000000000000000000000000000000000000000000000000000002915 237.0
BYD3_k127_6987459_4 protein conserved in bacteria K09955 - - 0.00000000000000000000000000000000000000000000000000000000001649 211.0
BYD3_k127_6987459_5 PFAM TadE family protein - - - 0.000000000000000000000000000000000000000000000000003947 202.0
BYD3_k127_6987459_6 Flp pilus assembly protein RcpC/CpaB K02279 - - 0.000000000000000000000000000000006486 138.0
BYD3_k127_6987459_7 Protein tyrosine kinase K12132 - 2.7.11.1 0.000000000000000000000000001424 119.0
BYD3_k127_6987459_8 Serine threonine protein kinase - - - 0.0000000000000000000000000883 123.0
BYD3_k127_6987459_9 - - - - 0.000000000000000003855 87.0
BYD3_k127_6992920_0 Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding K07303 - 1.3.99.16 1.351e-204 661.0
BYD3_k127_6992920_1 PFAM Carbon starvation protein CstA K06200 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002662 348.0
BYD3_k127_6992920_2 [2Fe-2S] binding domain K03518 - 1.2.5.3 0.00000000000000000000000000000000000000000000000000000000000000000001318 255.0
BYD3_k127_6992920_3 Domain of unknown function (DUF1993) K09983 - - 0.0000000000000000000000000000000000000000000000000000000000000002251 224.0
BYD3_k127_6992920_4 Phosphoglycerate mutase family - - - 0.00000000000000000000000000000000000000000000000001938 193.0
BYD3_k127_6992920_5 Integral membrane protein CcmA involved in cell shape determination - - - 0.0000000000000000000000000000000000000000000007799 171.0
BYD3_k127_6992920_6 - - - - 0.00000000000000000000000000000000005075 139.0
BYD3_k127_6992920_7 Selenoprotein, putative - - - 0.000000000003277 71.0
BYD3_k127_7038124_0 PFAM AMP-dependent synthetase and ligase - - - 9.927e-210 662.0
BYD3_k127_7038124_1 Major facilitator Superfamily - - - 0.00000000000000000009155 94.0
BYD3_k127_7080622_0 Peptidase family M28 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001639 480.0
BYD3_k127_7095295_0 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004205 578.0
BYD3_k127_7095295_1 ATPase (AAA K07478 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002499 583.0
BYD3_k127_7095295_2 DNA segregation ATPase FtsK SpoIIIE K03466 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009519 543.0
BYD3_k127_7095295_3 Belongs to the BI1 family K19416 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000009352 274.0
BYD3_k127_7095295_4 Outer membrane lipoprotein carrier protein LolA K03634 - - 0.0000000000000000000000000000000000000000000000000000465 196.0
BYD3_k127_7095295_5 Histidine kinase - - - 0.000000000000000000000000000000000000000000000001933 183.0
BYD3_k127_7095295_6 Cytochrome P460 - - - 0.00000000000000000001524 99.0
BYD3_k127_7095295_7 VanZ like family - - - 0.00000002298 62.0
BYD3_k127_7095295_8 Resolvase, N terminal domain - - - 0.00000003969 56.0
BYD3_k127_710111_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K07303 - 1.3.99.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009866 360.0
BYD3_k127_710111_1 Alkylmercury lyase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002507 285.0
BYD3_k127_710111_2 hydrolases or acyltransferases (alpha beta hydrolase superfamily) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000004896 258.0
BYD3_k127_710111_3 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.000000001734 58.0
BYD3_k127_713840_0 Involved in the TonB-independent uptake of proteins K03641 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000429 451.0
BYD3_k127_713840_1 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.0000000000000000000000000000000000000000000000000000522 196.0
BYD3_k127_713840_2 Belongs to the ompA family K03640 - - 0.000000000000000000000000000000000004627 142.0
BYD3_k127_713840_3 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 - 4.3.99.3 0.00000000000000000000000000000001192 128.0
BYD3_k127_713840_4 TonB C terminal K03646 - - 0.0000000000000000398 91.0
BYD3_k127_7138731_0 Catalyzes the reversible hydration of fumarate to (S)- malate K01676 - 4.2.1.2 1.063e-230 719.0
BYD3_k127_7138731_1 Part of a membrane complex involved in electron transport K03614 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003225 389.0
BYD3_k127_7138731_2 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007844 331.0
BYD3_k127_7138731_3 Part of a membrane complex involved in electron transport K03612 - - 0.00000000000000000000000000000000000000000000000000000000007775 211.0
BYD3_k127_7138731_4 Domain of unknown function (DUF1841) - - - 0.00000000000000000000000000000000000000000000001173 174.0
BYD3_k127_7138731_5 Part of a membrane complex involved in electron transport K03613 - - 0.00000000000000000000000000002281 128.0
BYD3_k127_7145319_0 Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN NodQ subfamily K00955 - 2.7.1.25,2.7.7.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002165 586.0
BYD3_k127_7145319_1 TIGRFAM 3'(2'),5'-bisphosphate nucleotidase K01082 - 3.1.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004341 298.0
BYD3_k127_7152716_0 Inositol monophosphatase K01092 - 3.1.3.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001043 322.0
BYD3_k127_7152716_1 Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6- dimethylbenzimidazole (DMB) K00768 - 2.4.2.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008641 316.0
BYD3_k127_7152716_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004511 265.0
BYD3_k127_7152716_3 COG1120 ABC-type cobalamin Fe3 -siderophores transport systems, ATPase components K02013 - 3.6.3.34 0.00000000000000000000000000000000000000000000000000000000000000000009305 239.0
BYD3_k127_7152716_4 Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate K02231 - 2.7.1.156,2.7.7.62 0.00000000000000000000000000000000000000001396 159.0
BYD3_k127_7152716_5 Belongs to the UPF0102 family K07460 - - 0.00000000000000000000000000001192 121.0
BYD3_k127_7152716_6 PFAM LppC K07121 - - 0.00000000000000000000000006825 111.0
BYD3_k127_7152716_7 Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate K02233 - 2.7.8.26 0.00000000002306 65.0
BYD3_k127_7152716_8 Cysteine-rich CPXCG - - - 0.00000000003235 68.0
BYD3_k127_7162085_0 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 GO:0003674,GO:0003824,GO:0004479,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006413,GO:0006418,GO:0006431,GO:0006464,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0016742,GO:0019538,GO:0019752,GO:0019988,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036211,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071951,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.1.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007773 387.0
BYD3_k127_7162085_1 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA K03500 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008169,GO:0008173,GO:0008649,GO:0008757,GO:0009383,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.176 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008057 387.0
BYD3_k127_7162085_2 signal transduction histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000191 241.0
BYD3_k127_7162085_3 Domain of unknown function (DUF4390) - - - 0.0000000003991 68.0
BYD3_k127_7162645_0 Belongs to the GPAT DAPAT family K00631 - 2.3.1.15 5.237e-217 696.0
BYD3_k127_7166150_0 domain protein - - - 3.15e-208 661.0
BYD3_k127_7166150_1 OmpA family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007705 537.0
BYD3_k127_7176518_0 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000481 379.0
BYD3_k127_7176518_1 Responsible for synthesis of pseudouridine from uracil K06179 - 5.4.99.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001499 332.0
BYD3_k127_7176518_2 Maf-like protein K06287 - - 0.0000000000000000000000000000000000000000000000000001113 196.0
BYD3_k127_7176518_3 Belongs to the bacterial ribosomal protein bL32 family K02911 - - 0.000000000000000000001026 95.0
BYD3_k127_7176518_4 Uncharacterized ACR, COG1399 K07040 - - 0.00000000000000009558 87.0
BYD3_k127_7176518_5 Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs K08300 - 3.1.26.12 0.0000000000008059 70.0
BYD3_k127_7179927_0 TonB-dependent heme hemoglobin receptor family protein K16087 - - 1.101e-274 867.0
BYD3_k127_7179927_1 His Kinase A (phosphoacceptor) domain - - - 1.183e-218 694.0
BYD3_k127_7179927_2 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000292 265.0
BYD3_k127_7179927_3 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003111 248.0
BYD3_k127_7179927_4 Pfam Response regulator receiver K02488 - 2.7.7.65 0.0000000000000000000000000000000000000000000000000000000000002707 238.0
BYD3_k127_7179927_5 Domain of unknown function (DUF1989) - - - 0.0000000000000000000000000000000000000000000000155 180.0
BYD3_k127_7179927_6 sirohydrochlorin cobaltochelatase activity K03795 - 4.99.1.3 0.00000000000000000000000000000001304 138.0
BYD3_k127_7179927_7 Methyltransferase K00567 - 2.1.1.63 0.0000000000000000000251 90.0
BYD3_k127_7179927_8 Endoribonuclease L-PSP - - - 0.0000000005198 60.0
BYD3_k127_7184775_0 LVIVD repeat - - - 0.0 1281.0
BYD3_k127_7193197_0 Sulfatase - - - 2.312e-212 679.0
BYD3_k127_7195639_0 Asparagine synthase K01953 - 6.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004326 474.0
BYD3_k127_7195639_1 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001793 332.0
BYD3_k127_7195639_2 Phosphopantetheine attachment site - - - 0.00000000000000000002101 93.0
BYD3_k127_719813_0 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine K00831 - 2.6.1.52 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003713 490.0
BYD3_k127_719813_1 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005467 421.0
BYD3_k127_719813_2 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002181 366.0
BYD3_k127_7198168_0 peptidase K01278 - 3.4.14.5 9.08e-234 745.0
BYD3_k127_7200467_0 RDD family - - - 0.0000000000000000000000000000000000000000000000000000000000000000003101 242.0
BYD3_k127_7200467_1 HDOD domain K03088 - - 0.0000000000000000000000000000000000000000000000000000000613 199.0
BYD3_k127_7213737_0 Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor K00697,K03692 - 2.4.1.15,2.4.1.213,2.4.1.347 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000182 468.0
BYD3_k127_7213737_1 Removes the phosphate from trehalose 6-phosphate to produce free trehalose K01087 - 3.1.3.12 0.000000000000000000000000000000000000000000000000004137 193.0
BYD3_k127_7213737_2 - - - - 0.000000004152 61.0
BYD3_k127_7213737_3 ParE toxin of type II toxin-antitoxin system, parDE K19092 - - 0.0004367 49.0
BYD3_k127_7215770_0 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000453 334.0
BYD3_k127_7215770_1 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000001987 163.0
BYD3_k127_7215770_2 cheY-homologous receiver domain - - - 0.00000000000000000000146 104.0
BYD3_k127_7215888_0 Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties K00688 - 2.4.1.1 9.428e-224 710.0
BYD3_k127_7222777_0 Transcriptional regulator K04033 - - 0.000000000000000000000000000000000000009071 158.0
BYD3_k127_7223174_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004904 602.0
BYD3_k127_7223174_1 peptidylprolyl isomerase K03770 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001097 334.0
BYD3_k127_7223174_2 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.00000000000000000000000000002591 124.0
BYD3_k127_7223174_3 Catalyzes a key regulatory step in fatty acid biosynthesis K00208 - 1.3.1.10,1.3.1.9 0.0000000000000000542 81.0
BYD3_k127_722440_0 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001432 443.0
BYD3_k127_722440_1 (GGDEF) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002797 392.0
BYD3_k127_722440_2 Glycosyl transferase family 2 K00721 - 2.4.1.83 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002389 288.0
BYD3_k127_722440_3 ubiE/COQ5 methyltransferase family K15942 - 2.1.1.288 0.00000000000000000000000000000000032 135.0
BYD3_k127_7226464_0 Bacterial NAD-glutamate dehydrogenase K15371 - 1.4.1.2 0.0 1042.0
BYD3_k127_722948_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 1.595e-218 689.0
BYD3_k127_722948_1 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.0003547 46.0
BYD3_k127_7231885_0 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005762 478.0
BYD3_k127_7231885_1 PFAM Amylo-alpha-16-glucosidase - - - 0.000000000000000000000000000000000000000000000000003016 187.0
BYD3_k127_7231885_2 DJ-1/PfpI family - - - 0.000000000000000000007743 94.0
BYD3_k127_7232917_0 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003782 444.0
BYD3_k127_7232917_1 enterobactin catabolic process - - - 0.00000000000000000000000000000000000000000000000000000000000000000001332 254.0
BYD3_k127_7232917_2 PFAM Endoribonuclease L-PSP K09022 - 3.5.99.10 0.0000000000000000000000000000000000000000062 166.0
BYD3_k127_7233533_0 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02483 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002006 293.0
BYD3_k127_7233533_1 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005611 259.0
BYD3_k127_7233533_2 Domain of unknown function (DUF3526) K01992 - - 0.00000000000000000000000000000000000000000000000000000000001749 228.0
BYD3_k127_7233533_3 Domain of unknown function (DUF3526) K01992 - - 0.00000000000000000000000000000000000001782 158.0
BYD3_k127_723645_0 ABC-type sugar transport systems, permease components K02025 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003372 407.0
BYD3_k127_723645_1 Binding-protein-dependent transport system inner membrane component K05815 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005603 358.0
BYD3_k127_723645_2 PFAM Glycoside hydrolase 15-related - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002717 263.0
BYD3_k127_7238240_0 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000004614 196.0
BYD3_k127_7238240_1 RND efflux system, outer membrane K18139 - - 0.000000000000001298 80.0
BYD3_k127_7241224_0 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001992 510.0
BYD3_k127_7241224_1 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00412 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000216 507.0
BYD3_k127_7241224_2 Trypsin K04691 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001034 331.0
BYD3_k127_7241224_3 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00411 - 1.10.2.2 0.00000000000000000000000000000000000000000000000000000000000000000006681 236.0
BYD3_k127_7244724_0 Belongs to the enoyl-CoA hydratase isomerase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001119 318.0
BYD3_k127_7244724_1 Acyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004359 248.0
BYD3_k127_7244724_2 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.0000000000000000000006602 108.0
BYD3_k127_7246523_0 PFAM Amidohydrolase 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001437 430.0
BYD3_k127_7246523_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002944 280.0
BYD3_k127_7246523_2 Nitroreductase family - - - 0.0000000000000000000000000000000000000000009157 167.0
BYD3_k127_7246523_3 Acyl dehydratase - - - 0.000000000000000000000000000021 123.0
BYD3_k127_7246523_5 TIGRFAM molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 - - 0.000000000000000000004666 94.0
BYD3_k127_7246523_6 PFAM response regulator receiver - - - 0.00000000002195 70.0
BYD3_k127_7251123_0 MaoC like domain - - - 0.00000000000000000000000000000000000000000000000000008565 198.0
BYD3_k127_7251123_1 Cytochrome C biogenesis K02200 - - 0.0000000000000000000000000000000002272 146.0
BYD3_k127_7259639_0 Cellulase (glycosyl hydrolase family 5) - - - 2.149e-235 755.0
BYD3_k127_7259639_1 TonB dependent receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001665 394.0
BYD3_k127_7259639_2 Phytanoyl-CoA dioxygenase (PhyH) - - - 0.000000000000000000000000000000000000000000000000000000000000000006284 234.0
BYD3_k127_7259639_3 FCD K15735 GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:1903506,GO:2000112,GO:2001141 - 0.0000000000000000000000000000000002555 141.0
BYD3_k127_7259723_0 ATPase family associated with various cellular activities (AAA) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005933 375.0
BYD3_k127_7259723_1 PspA/IM30 family K03969 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000626 347.0
BYD3_k127_7262443_0 DNA restriction-modification system - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001189 313.0
BYD3_k127_7262443_2 - - - - 0.00004876 49.0
BYD3_k127_7262531_0 PFAM Pyruvate carboxyltransferase K01640,K18314 - 4.1.3.4,4.1.3.46 0.00000000000000000000000000000000000000000000000000000007557 201.0
BYD3_k127_7262531_1 FCD - - - 0.000000000000000000000000000000000000000000000001632 181.0
BYD3_k127_7262531_2 Flavin containing amine oxidoreductase K09845 - 1.3.99.27 0.000000000000000000000000000000000000000000006476 163.0
BYD3_k127_7263610_0 TonB dependent receptor - - - 3.636e-227 728.0
BYD3_k127_7263610_1 TonB-dependent receptor plug - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003805 596.0
BYD3_k127_7263610_2 Zn-dependent dipeptidase, microsomal dipeptidase K01273 - 3.4.13.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006518 295.0
BYD3_k127_7265228_0 Beta-lactamase - - - 2.867e-266 835.0
BYD3_k127_7265228_1 PFAM Alcohol dehydrogenase GroES domain protein - - - 1.299e-203 640.0
BYD3_k127_7265228_10 KTSC domain - - - 0.00000000000003623 74.0
BYD3_k127_7265228_12 Pfam:DUF1049 K08992 - - 0.0000004377 55.0
BYD3_k127_7265228_2 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K07277 - - 3.736e-200 650.0
BYD3_k127_7265228_3 PFAM Mannitol dehydrogenase K00040,K00045 - 1.1.1.57,1.1.1.67 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001918 458.0
BYD3_k127_7265228_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001958 289.0
BYD3_k127_7265228_5 Domain of unknown function (DUF4397) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001459 293.0
BYD3_k127_7265228_6 - - - - 0.000000000000000000000000000000000000000000000000000000000000002937 228.0
BYD3_k127_7265228_7 Polyketide cyclase / dehydrase and lipid transport - - - 0.0000000000000000000000000000000000000000000000000000000000001172 221.0
BYD3_k127_7265228_8 Belongs to the UPF0061 (SELO) family K08997 - - 0.00000000000000000000000000000000000005338 145.0
BYD3_k127_7265228_9 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000000000006956 145.0
BYD3_k127_7272799_0 COG1629 Outer membrane receptor proteins, mostly Fe transport - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001029 428.0
BYD3_k127_7272799_1 Prolyl oligopeptidase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001786 311.0
BYD3_k127_7272799_2 FecR protein K07165 - - 0.0000000000000000000000000000000000000000000000000000000000000000007307 241.0
BYD3_k127_7272799_3 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000000000000000000003756 221.0
BYD3_k127_7272799_4 Belongs to the peptidase S8 family - - - 0.000000000000000000000000000000000000000000000000000000000003832 238.0
BYD3_k127_7272799_5 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000007754 171.0
BYD3_k127_7272799_6 peptidase - - - 0.00006046 46.0
BYD3_k127_7273827_0 L,D-transpeptidase catalytic domain K21470 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009547 322.0
BYD3_k127_7273827_1 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions - - - 0.000000000000000000000000000000000000000000000000000000000000000000001397 243.0
BYD3_k127_7273827_2 Predicted membrane protein (DUF2238) K08984 - - 0.000000000000000000000000000000000000000000000000000000000000000000001994 243.0
BYD3_k127_7273827_3 Flavodoxin-like fold - - - 0.000000000000000000000000000000000000000000000000000000000000000004645 231.0
BYD3_k127_7273827_4 Outer membrane protein W K07275 - - 0.000000000000000000000000000000000000000000002929 171.0
BYD3_k127_7273827_5 PFAM Cytochrome C - - - 0.00000000000000000000000000000005238 138.0
BYD3_k127_7273827_6 Phosphoribosyl transferase domain K07100 - - 0.00000000000000000000000000001643 124.0
BYD3_k127_7275276_0 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001232 392.0
BYD3_k127_7275276_1 Catalyzes, although with low efficiency, the sulfur transfer reaction from thiosulfate to cyanide - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008047 322.0
BYD3_k127_7275276_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000005266 228.0
BYD3_k127_7275276_3 CorA-like Mg2+ transporter protein - - - 0.00000000000000000000806 95.0
BYD3_k127_72761_0 UPF0365 protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002006 449.0
BYD3_k127_72761_1 NfeD-like C-terminal, partner-binding K07403 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001362 441.0
BYD3_k127_7277331_0 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006746 378.0
BYD3_k127_7277331_1 HEAT repeats - - - 0.0000000000000000000000000000000000000000000000000000000000000007479 237.0
BYD3_k127_7283650_0 Belongs to the type-B carboxylesterase lipase family K03929 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002695 321.0
BYD3_k127_7283650_1 Belongs to the type-B carboxylesterase lipase family K03929 - - 0.0000000000000000000000000000000000000000000000000000000000000000001587 236.0
BYD3_k127_7283650_2 carboxylic ester hydrolase activity K03929 - - 0.000000000000000000000000000000000000000000000000000000000003011 215.0
BYD3_k127_7288789_0 Secreted protein, containing von Willebrand factor (VWF) type - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001138 357.0
BYD3_k127_7288789_1 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001578 293.0
BYD3_k127_7288789_2 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406,K05874 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001413 274.0
BYD3_k127_7288789_3 von Willebrand factor (VWF) type A domain - - - 0.000000000000000000000000000000153 125.0
BYD3_k127_7288789_4 - - - - 0.00000000000000000000000000002453 133.0
BYD3_k127_7288789_5 - - - - 0.0000000000000008426 88.0
BYD3_k127_7296470_0 L-sorbosone dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002013 370.0
BYD3_k127_7296470_1 Belongs to the RNA methyltransferase TrmD family K00554 - 2.1.1.228 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001927 317.0
BYD3_k127_7296470_2 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 - - 0.000000000000000000000000000000000000000000000000001948 183.0
BYD3_k127_7296470_3 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.000000001053 61.0
BYD3_k127_7297218_0 C4-dicarboxylate - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000123 324.0
BYD3_k127_7297218_1 2-keto-4-pentenoate hydratase K02554 - 4.2.1.80 0.0000000000000000000000000000000000000000000000000000000000000000000000009787 255.0
BYD3_k127_729778_0 Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00163 - 1.2.4.1 2.957e-317 988.0
BYD3_k127_729778_1 Major facilitator Superfamily K08195 - - 0.000000000000000000000000000000000005575 145.0
BYD3_k127_729833_0 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004956 347.0
BYD3_k127_729833_1 polysaccharide export protein K01991 - - 0.0000000000000000000000004827 108.0
BYD3_k127_729833_2 Glycosyltransferase like family 2 - - - 0.000000000000001621 81.0
BYD3_k127_7322320_0 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000008347 298.0
BYD3_k127_7322320_1 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008331 273.0
BYD3_k127_7322320_2 heat shock protein DnaJ K05516 - - 0.000000000000000000000000000000001848 131.0
BYD3_k127_7322320_3 helix_turn_helix, Lux Regulon - - - 0.0000000000000001479 88.0
BYD3_k127_7322589_0 COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II K12508 - 6.2.1.34 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006571 461.0
BYD3_k127_7322589_1 KR domain - - - 0.0000000000000000000000000000004612 124.0
BYD3_k127_7327781_0 Peptidogalycan biosysnthesis/recognition - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001155 384.0
BYD3_k127_7327781_1 Asparagine synthase K01953 - 6.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006874 337.0
BYD3_k127_7341087_0 Endonuclease/Exonuclease/phosphatase family - - - 0.0000000000000000000000000000000008649 142.0
BYD3_k127_7341087_1 - - - - 0.0000000000000001311 87.0
BYD3_k127_7341087_2 NYN domain - - - 0.0000001623 53.0
BYD3_k127_734805_0 N-terminal domain of (some) glycogen debranching enzymes - - - 1.286e-201 640.0
BYD3_k127_734805_1 Glutathione S-transferase K00799 - 2.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000005231 244.0
BYD3_k127_734805_2 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000000000000000000000000000000000000006087 227.0
BYD3_k127_7355195_0 peptidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002146 464.0
BYD3_k127_7355195_1 Outer membrane receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006858 323.0
BYD3_k127_7361335_0 COG1629 Outer membrane receptor proteins, mostly Fe transport - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003623 432.0
BYD3_k127_7361335_1 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 0.0000000000000000000000000000001784 127.0
BYD3_k127_7375091_0 COGs COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000612 267.0
BYD3_k127_7375091_1 Lipoprotein - - - 0.00000000000000000000000000000000000000000000000000000005054 200.0
BYD3_k127_7375091_2 Protein of unknown function, DUF488 - - - 0.000000000000000000000000000000000000000000000000000007948 192.0
BYD3_k127_7375091_3 Phosphoenolpyruvate phosphomutase - - - 0.00000000000000000000000000000000000000000000000000195 186.0
BYD3_k127_7375091_4 EF-hand, calcium binding motif - - - 0.0000000000000004449 88.0
BYD3_k127_7394586_0 Peptidase family M3 K01284 - 3.4.15.5 2.629e-281 878.0
BYD3_k127_7394586_1 PFAM Haloacid dehalogenase-like hydrolase - - - 2.25e-201 642.0
BYD3_k127_7394586_2 PFAM alpha beta hydrolase fold K01561 - 3.8.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005275 351.0
BYD3_k127_7394586_3 Protein of unknown function (DUF3089) - - - 0.000000000000000000000000000000000000000000000000000000000001285 213.0
BYD3_k127_7394586_4 - - - - 0.00000000000000000003109 95.0
BYD3_k127_739712_0 TIGRFAM Type VI secretion system, FHA K11913 - - 0.000000000000000000000000000000000000000000000000002872 201.0
BYD3_k127_739712_1 SMART protein phosphatase 2C domain protein K01090 - 3.1.3.16 0.00000000000000000000000000000000000000000000000009697 186.0
BYD3_k127_739712_2 glyoxalase III activity - - - 0.00000000000001601 81.0
BYD3_k127_7412470_0 ABC-2 family transporter protein - - - 1.366e-225 732.0
BYD3_k127_7412470_1 ABC transporter - - - 0.0000000000000000000000000000000000000000001907 162.0
BYD3_k127_7415186_0 LytTr DNA-binding domain K02477 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003334 271.0
BYD3_k127_7415186_1 Carboxymuconolactone decarboxylase family - - - 0.000000000000000000000000000000000000000000000000000000000000001348 220.0
BYD3_k127_7415186_2 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000001573 225.0
BYD3_k127_7421130_0 - - - - 8.952e-216 681.0
BYD3_k127_7421130_1 COG1629 Outer membrane receptor proteins, mostly Fe transport K02014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002573 381.0
BYD3_k127_7421130_2 amidinotransferase K01482 - 3.5.3.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001828 366.0
BYD3_k127_7421130_3 HAF family - - - 0.0001758 53.0
BYD3_k127_7441716_0 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001843 531.0
BYD3_k127_7441716_1 Acetyltransferase (GNAT) domain - - - 0.00000000000000007373 88.0
BYD3_k127_7441716_2 Oxygenase, catalysing oxidative methylation of damaged DNA K09990 - - 0.00000000000008193 71.0
BYD3_k127_7442189_0 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001183 554.0
BYD3_k127_7442189_1 Branched-chain amino acid transport system / permease component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001995 450.0
BYD3_k127_7442189_2 Branched-chain amino acid transport system / permease component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001625 372.0
BYD3_k127_7442189_3 ATPases associated with a variety of cellular activities - - - 0.00000000000000000000000000000000000003099 147.0
BYD3_k127_7464055_0 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 - 2.7.1.148 0.000000000000000000000000000000000000000000000000000000000000000000000000000001053 270.0
BYD3_k127_7464055_1 COG0457 FOG TPR repeat - - - 0.00000000000000000000000000000000000000000002556 175.0
BYD3_k127_7464055_2 Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein K02494 GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0006807,GO:0008104,GO:0008150,GO:0008152,GO:0008289,GO:0009279,GO:0010876,GO:0016020,GO:0019538,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0033036,GO:0033218,GO:0034613,GO:0042157,GO:0042277,GO:0043170,GO:0044238,GO:0044462,GO:0044464,GO:0044872,GO:0044873,GO:0044874,GO:0051179,GO:0051641,GO:0051668,GO:0070727,GO:0071704,GO:0071723,GO:0071944,GO:0072657,GO:1901564 - 0.0000000000000000000000001148 113.0
BYD3_k127_7474568_0 Uncharacterized alpha/beta hydrolase domain (DUF2235) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003099 319.0
BYD3_k127_7474568_1 Belongs to the WrbA family K03809 GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0016491,GO:0055114 1.6.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000436 258.0
BYD3_k127_7474568_2 Belongs to the pirin family K06911 - - 0.0000000000000000000000000000004273 123.0
BYD3_k127_7475774_0 Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA K12297 - 2.1.1.173,2.1.1.264 9.138e-242 766.0
BYD3_k127_7475774_1 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00822 - 2.6.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004395 470.0
BYD3_k127_7475774_2 Carbon-nitrogen hydrolase K12251 - 3.5.1.53 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006427 435.0
BYD3_k127_7475774_3 Cupin domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001626 246.0
BYD3_k127_7475774_4 FAD dependent oxidoreductase K09471 - - 0.00000000000000000000000000000000000000000000000000000000006976 206.0
BYD3_k127_7475774_5 synthase K01737 - 4.1.2.50,4.2.3.12 0.000000000000000000000000000000000000000000000000000000002086 205.0
BYD3_k127_7484921_0 Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009872 482.0
BYD3_k127_7484921_1 related to Ser Thr protein kinases K07102 GO:0000166,GO:0000270,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005975,GO:0006022,GO:0006040,GO:0006082,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009254,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0017076,GO:0019200,GO:0019752,GO:0030203,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0046835,GO:0071704,GO:0097159,GO:0097172,GO:0097367,GO:1901135,GO:1901265,GO:1901363,GO:1901564 2.7.1.221 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004754 365.0
BYD3_k127_7484921_2 PFAM Nucleotidyl transferase K00992 - 2.7.7.99 0.0000000000000000000000000000000000000000000000000000000000000000000000002389 253.0
BYD3_k127_7484921_3 Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation K03771 - 5.2.1.8 0.000000000000000008817 89.0
BYD3_k127_7486249_0 NAD dependent epimerase/dehydratase family K05281 - 1.3.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006285 323.0
BYD3_k127_7486249_1 peptidase S9 - - - 0.00000000000000000000006392 99.0
BYD3_k127_7486566_0 transcription factor binding K15836 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006324 406.0
BYD3_k127_7486566_1 - - - - 0.000000000000000000000000008901 111.0
BYD3_k127_7486566_2 YHS domain protein - - - 0.0000000000000000003202 88.0
BYD3_k127_7486566_4 - - - - 0.000000000000000373 80.0
BYD3_k127_7486827_0 Xylose isomerase-like TIM barrel - - - 0.0000000000000000000000000000000000000000000000000000000000000007258 231.0
BYD3_k127_7486827_1 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000000000000000004627 165.0
BYD3_k127_7486827_2 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 - - 0.0000000000000000000000000000000000000002843 153.0
BYD3_k127_7486885_0 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008653 457.0
BYD3_k127_7486885_1 Cytidylyltransferase family - - - 0.0000000000000000000000000000000000000000000000000000001194 202.0
BYD3_k127_7488698_0 RES - - - 0.000000000000000000000000000000000000000000000000000000000000003395 225.0
BYD3_k127_7488698_1 Protein of unknown function (DUF2384) - - - 0.00000000000000000000000000000000000000000006281 167.0
BYD3_k127_7488698_2 Protein of unknown function (DUF559) - - - 0.0004623 46.0
BYD3_k127_7495681_0 Belongs to the sigma-70 factor family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002034 364.0
BYD3_k127_7495681_1 COG0656 Aldo keto reductases, related to diketogulonate reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000007205 244.0
BYD3_k127_7495681_2 YCII-related domain - - - 0.000000000000000000000000000000000000000000000000000000004072 201.0
BYD3_k127_7495681_3 Thioesterase - - - 0.000000000000000000000000000000000000000000002094 167.0
BYD3_k127_7500960_0 Protein of unknown function (DUF3300) - - - 0.0000000000000000000000000000000000000000000000000000000000000000008026 239.0
BYD3_k127_7500960_1 Belongs to the ompA family - - - 0.00000000000000000000000000000000000001028 152.0
BYD3_k127_750738_0 Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle K01596 - 4.1.1.32 1.406e-264 821.0
BYD3_k127_7513628_0 PFAM Peptidase M48 K06013 - 3.4.24.84 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003832 428.0
BYD3_k127_7513628_1 EXOIII K13288 GO:0000175,GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0004529,GO:0004532,GO:0004536,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006401,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008296,GO:0008297,GO:0008310,GO:0008408,GO:0008946,GO:0009056,GO:0009057,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016796,GO:0016895,GO:0016896,GO:0019439,GO:0034611,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090503,GO:0140097,GO:0140098,GO:1901360,GO:1901361,GO:1901575 - 0.0000000000000000000000000000000000000000000000000000000000000000001215 234.0
BYD3_k127_7524144_0 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004263 554.0
BYD3_k127_7524144_1 COG3209 Rhs family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000218 259.0
BYD3_k127_7524144_2 CAAX protease self-immunity K07052 - - 0.0000000000000000000000000000000000000000000001063 173.0
BYD3_k127_7524144_3 Transcriptional regulatory protein, C terminal - - - 0.00000000000000000000000000002967 125.0
BYD3_k127_7524144_4 helix_turn_helix ASNC type - GO:0001101,GO:0003674,GO:0003676,GO:0003677,GO:0003700,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006355,GO:0006520,GO:0006522,GO:0006524,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009078,GO:0009080,GO:0009889,GO:0009987,GO:0010033,GO:0010243,GO:0010468,GO:0010556,GO:0016054,GO:0019219,GO:0019222,GO:0019752,GO:0031323,GO:0031326,GO:0042221,GO:0043200,GO:0043201,GO:0043436,GO:0043565,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046395,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606,GO:1901698,GO:1901700,GO:1903506,GO:2000112,GO:2001141 - 0.0000000000000000000000000009255 120.0
BYD3_k127_7524144_5 cAMP biosynthetic process - - - 0.000000000002233 76.0
BYD3_k127_7526314_0 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005263 321.0
BYD3_k127_7526314_1 Protein of unknown function, DUF484 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000271 254.0
BYD3_k127_7526314_2 Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage K08311 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009892,GO:0009987,GO:0010468,GO:0010605,GO:0010629,GO:0016070,GO:0016071,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0019222,GO:0019439,GO:0034353,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0060255,GO:0065007,GO:0071704,GO:0090304,GO:1901360,GO:1901361,GO:1901575 - 0.0000000000000000000000000000000000000000000000000000000002933 207.0
BYD3_k127_7526314_3 Iron--sulfur cluster insertion protein erpA K15724 - - 0.000000000000000000000000000000000000000000000000000749 186.0
BYD3_k127_7526314_4 PFAM Uncharacterised protein family (UPF0093) K08973 - - 0.00000000000000000000000000000000000000000004564 165.0
BYD3_k127_7526314_5 cell shape determination - - - 0.00000000000000000000000000000000005898 139.0
BYD3_k127_7526314_6 - - - - 0.0000000000000000000002395 108.0
BYD3_k127_7533269_0 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002688 450.0
BYD3_k127_7533269_1 chemotaxis protein K03406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000144 328.0
BYD3_k127_7533269_2 Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP K00575 - 2.1.1.80 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005031 283.0
BYD3_k127_7533269_3 Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis K03411 - 3.5.1.44 0.00000000000000000000000000000000000000000000000000000000000000000006261 237.0
BYD3_k127_7533269_4 GAF domain - - - 0.000000000000000000000000000000000000000000000000000000000000000008324 246.0
BYD3_k127_7533269_5 HDOD domain - - - 0.0000000000000000000000000000000000000000000000000000001559 205.0
BYD3_k127_7533269_6 PFAM CheW-like K03408 - - 0.000000000000000000000000000000000000000000007454 169.0
BYD3_k127_7533269_7 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 0.00000000000000000307 85.0
BYD3_k127_7539682_0 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003159 362.0
BYD3_k127_7539682_1 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.0000000000000000000000000000000000000000000000000000000000005214 220.0
BYD3_k127_7539682_2 Serine aminopeptidase, S33 - - - 0.0000000000000000000000000000000000000007849 158.0
BYD3_k127_7539682_3 Serine aminopeptidase, S33 - - - 0.0000000000002871 70.0
BYD3_k127_7542537_0 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004592 409.0
BYD3_k127_7542537_1 Belongs to the peptidase S33 family K01259 - 3.4.11.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001906 380.0
BYD3_k127_7542537_2 lipolytic protein G-D-S-L family - - - 0.0000000000000000000000000000000000000000009072 166.0
BYD3_k127_7545052_0 Protein tyrosine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004742 507.0
BYD3_k127_7545052_1 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.000000000000000000000000000000000000002204 153.0
BYD3_k127_7548852_0 domain, Protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002111 421.0
BYD3_k127_7550579_0 COG4618 ABC-type protease lipase transport system, ATPase and permease components K16299 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001479 511.0
BYD3_k127_7550579_1 Hemolysin-type calcium-binding repeat (2 copies) K01406 - 3.4.24.40 0.0000000000000000000000000000000000000000000000000000000000000000000001315 269.0
BYD3_k127_7550579_2 Haemolysin-type calcium-binding repeat (2 copies) K11005,K11029 GO:0001906,GO:0003674,GO:0003824,GO:0004016,GO:0005575,GO:0005576,GO:0006873,GO:0006874,GO:0006875,GO:0007204,GO:0008150,GO:0009975,GO:0009987,GO:0016829,GO:0016849,GO:0019725,GO:0019835,GO:0030003,GO:0031640,GO:0035821,GO:0042592,GO:0044179,GO:0044364,GO:0044419,GO:0044764,GO:0048878,GO:0050801,GO:0051480,GO:0051704,GO:0051715,GO:0055065,GO:0055074,GO:0055080,GO:0055082,GO:0065007,GO:0065008,GO:0072503,GO:0072507,GO:0098771 4.6.1.1 0.00000000000000000000000000001938 123.0
BYD3_k127_7550579_3 Haemolysin-type calcium-binding repeat (2 copies) - - - 0.000000000000000002307 101.0
BYD3_k127_7552612_0 Iron-storage protein, whose ferroxidase center binds Fe(2 ) ions, oxidizes them by dioxygen to Fe(3 ), and participates in the subsequent Fe(3 ) oxide mineral core formation within the central cavity of the protein complex K03594 - 1.16.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000001859 244.0
BYD3_k127_7552612_1 COG2148 Sugar transferases involved in lipopolysaccharide synthesis - - - 0.0000000000000000000000000000000000000000000000000000000000000008729 230.0
BYD3_k127_7552612_2 Protein involved in outer membrane biogenesis - - - 0.0000000000000000000000006791 113.0
BYD3_k127_7552612_3 BFD-like [2Fe-2S] binding domain K02192 - - 0.000000002777 67.0
BYD3_k127_7557710_0 DNA helicase K03654 - 3.6.4.12 9.098e-260 814.0
BYD3_k127_7557710_1 PFAM phosphoesterase, PA-phosphatase related K19302 - 3.6.1.27 0.0000000000000000000000000000000000000000000000000005599 193.0
BYD3_k127_7557710_2 Protein of unknown function (DUF4199) - - - 0.0000000000000000000000000000000000000000000000002069 181.0
BYD3_k127_7557710_3 glyoxalase bleomycin resistance protein dioxygenase - - - 0.00000000000000000000000000000000000000000000001218 175.0
BYD3_k127_7557710_4 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000188 157.0
BYD3_k127_7557710_5 - - - - 0.00000000000000000000000000000000001072 140.0
BYD3_k127_7557710_6 Protein of unknown function (DUF998) - - - 0.0000000000000000006484 95.0
BYD3_k127_7558360_0 Cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007205 539.0
BYD3_k127_7558360_1 involved in outer membrane biogenesis K07289 GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0032386,GO:0032879,GO:0032880,GO:0033157,GO:0044464,GO:0050789,GO:0051049,GO:0051223,GO:0060341,GO:0065007,GO:0070201,GO:0071944,GO:0090087,GO:0090313,GO:1903533,GO:1903827,GO:1905475 - 0.0000000000000000000000000000000000002648 146.0
BYD3_k127_7558360_2 Polyketide cyclase / dehydrase and lipid transport - - - 0.000000000000000001552 93.0
BYD3_k127_756081_0 Putative diguanylate phosphodiesterase K21023 - 2.7.7.65 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002165 351.0
BYD3_k127_756081_1 Homotrimeric ring hydroxylase - - - 0.0003352 48.0
BYD3_k127_7572969_0 COG1629 Outer membrane receptor proteins, mostly Fe transport K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006084 277.0
BYD3_k127_7572969_1 FecR protein - - - 0.0000000000000000000000000000000000000001201 164.0
BYD3_k127_7572969_2 Sigma-70 region 2 - - - 0.0000000000000000000000000000000000000002573 156.0
BYD3_k127_7573567_0 Pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002845 401.0
BYD3_k127_7573567_1 beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000001442 227.0
BYD3_k127_7573567_2 Protein of unknown function (DUF2845) - - - 0.000004131 53.0
BYD3_k127_7580739_0 POT family K03305 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004933 361.0
BYD3_k127_7580739_1 Beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000157 364.0
BYD3_k127_7586936_0 cytoplasmic domain of flagellar protein K04061 - - 0.00000000000000000000000728 104.0
BYD3_k127_7586936_1 COG0784 FOG CheY-like receiver K03413 - - 0.00000000000003905 77.0
BYD3_k127_7586936_2 factor (Antagonist - - - 0.00000001116 63.0
BYD3_k127_7586936_3 Flagellar hook-length control protein FliK - - - 0.00000002011 66.0
BYD3_k127_7610061_0 Protein of unknown function (DUF808) K09781 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000914 346.0
BYD3_k127_7610061_1 Major facilitator superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007639 330.0
BYD3_k127_7610061_2 Bacterial protein of unknown function (DUF924) - - - 0.000000000000000000000000000000000000000000002869 169.0
BYD3_k127_7610952_0 PFAM transposase IS66 - - - 9.375e-239 747.0
BYD3_k127_7610952_1 PFAM IS66 Orf2 family protein - - - 0.000000000000000000000000000000000000000000000000000001692 192.0
BYD3_k127_7610952_2 PFAM transposase IS3 IS911 family protein K07483 - - 0.0000000000000000000000000005205 117.0
BYD3_k127_7611289_0 COG3540 Phosphodiesterase alkaline phosphatase D K01113 - 3.1.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000013 610.0
BYD3_k127_7611289_1 Peptidase family S58 K01266 - 3.4.11.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002325 432.0
BYD3_k127_7611289_2 Chitin-binding domain type 3 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003758 388.0
BYD3_k127_7611289_3 Putative transposase, YhgA-like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006052 376.0
BYD3_k127_7611289_4 MerR family regulatory protein - - - 0.000000000000000000000000000000000000000000000000000000000000001423 230.0
BYD3_k127_7611289_5 Glutathione S-transferase - - - 0.00000000000000000000000000000000000000000000000000007169 194.0
BYD3_k127_7611289_6 Acyltransferase family - - - 0.000000000000000000000000000000000000000002145 169.0
BYD3_k127_7611289_7 - - - - 0.00000000000000000001695 100.0
BYD3_k127_7618224_0 Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate K01465 - 3.5.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001994 471.0
BYD3_k127_7618224_1 Alpha/beta hydrolase family K06889 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003628 419.0
BYD3_k127_7618224_2 Belongs to the peptidase M17 family K01255,K01259 - 3.4.11.1,3.4.11.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001298 315.0
BYD3_k127_7618224_3 quinolinate catabolic process K00767 - 2.4.2.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002006 303.0
BYD3_k127_7618224_4 Trims short 3' overhangs of a variety of RNA species, leaving a one or two nucleotide 3' overhang. Responsible for the end-turnover of tRNA specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A). Also appears to be involved in tRNA biosynthesis K03683 GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008408,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0031123,GO:0034470,GO:0034641,GO:0034660,GO:0042780,GO:0043170,GO:0043628,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:1901360 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002057 261.0
BYD3_k127_7618224_5 Urate oxidase N-terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000025 231.0
BYD3_k127_7618224_6 Belongs to the glutaredoxin family. Monothiol subfamily K07390 - - 0.000000000000000000000000000000000000000006165 155.0
BYD3_k127_7618224_7 Protein of unknown function (DUF1289) K06938 - - 0.0000000002181 63.0
BYD3_k127_7625743_1 - - - - 0.000000000000000000000000000002201 125.0
BYD3_k127_7625743_2 Flagellar motor protein K02557 - - 0.000000000000000000000003263 104.0
BYD3_k127_7632972_0 UPF0313 protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002001 422.0
BYD3_k127_7632972_1 Belongs to the DNA glycosylase MPG family K03652 GO:0003674,GO:0003824,GO:0003905,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 3.2.2.21 0.00000000000000000000000000000000000000000000000000000000001682 213.0
BYD3_k127_7632972_2 Peptidase family M28 - - - 0.00000000000000000000000000000000000000000000000000001003 198.0
BYD3_k127_7632972_3 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - 0.000000000000000000000000000000000000000000000004091 188.0
BYD3_k127_7632972_4 ABC-type phosphate transport system, periplasmic component - - - 0.000000000000000000000000000000000005924 143.0
BYD3_k127_7638090_0 lipoprotein releasing system, transmembrane protein, LolC E family K09808 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002486 451.0
BYD3_k127_7638090_1 lipoprotein releasing system, transmembrane protein, LolC E family K09808 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002364 378.0
BYD3_k127_7638090_2 Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner K09810 - - 0.000000000000000000000000000000000000000000000000000000000000000000009769 247.0
BYD3_k127_7638090_3 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.0000000000000000000000000000000000000000000000003595 182.0
BYD3_k127_7638090_4 - - - - 0.00000000002823 68.0
BYD3_k127_7640331_0 Responsible for the transport of dicarboxylates such as succinate, fumarate, and malate K11103 - - 0.000000000000000000000000000000000000000001445 158.0
BYD3_k127_7640331_1 Protein of unknown function (DUF2721) - - - 0.00000000000000006178 85.0
BYD3_k127_7640331_2 Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis K03411 - 3.5.1.44 0.0006156 49.0
BYD3_k127_7641590_0 Heparinase II - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004524 541.0
BYD3_k127_7641590_1 PFAM Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001388 282.0
BYD3_k127_7641590_2 PFAM glycosyl transferase group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001705 284.0
BYD3_k127_7641590_3 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002573 284.0
BYD3_k127_7661534_0 Belongs to the iron ascorbate-dependent oxidoreductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007018 372.0
BYD3_k127_7661534_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001307 292.0
BYD3_k127_7661534_2 A domain in the BMP inhibitor chordin and in microbial proteins. - - - 0.000000000000000000000000000000000000000003105 161.0
BYD3_k127_7661534_3 Nudix hydrolase - - - 0.00000003978 54.0
BYD3_k127_7664537_0 Response regulator receiver K03413 - - 0.000000000000000000000000000000000000000000000001389 176.0
BYD3_k127_7664537_1 Phosphoglycerate mutase family - - - 0.000000000000000000000000000000000000000000002128 173.0
BYD3_k127_7664537_2 AMP-binding enzyme C-terminal domain K00666,K20034 - 6.2.1.44 0.000000000000000000000000000000000000000000287 159.0
BYD3_k127_7664537_3 - - - - 0.0000000000000003593 87.0
BYD3_k127_7664537_4 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.000000004335 58.0
BYD3_k127_766650_0 Protein of unknown function (DUF1800) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000123 423.0
BYD3_k127_766650_1 COG0697 Permeases of the drug metabolite transporter (DMT) superfamily K15270 - - 0.0000000000000000000000000000000000000000004575 164.0
BYD3_k127_766650_2 DNA-templated transcription, initiation K03088 - - 0.000000000000000000000000000000000004141 143.0
BYD3_k127_766650_3 Protein of unknown function (DUF1501) - - - 0.000005548 51.0
BYD3_k127_766650_4 - - - - 0.00004571 52.0
BYD3_k127_7678662_0 Porphyromonas-type peptidyl-arginine deiminase K10536 - 3.5.3.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005086 529.0
BYD3_k127_7678662_1 Polyphosphate kinase 2 (PPK2) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008094 443.0
BYD3_k127_7678662_2 Protein of unknown function (DUF3570) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002115 390.0
BYD3_k127_7678662_3 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007775 295.0
BYD3_k127_7678662_4 Peptidase family M23 - - - 0.00000000000000000000000000000000000000000000000000000000002968 222.0
BYD3_k127_7678662_5 Protein of unknown function (DUF3187) - - - 0.000000000000000000000000000000000000000000003069 182.0
BYD3_k127_7678662_6 Domain of unknown function (DUF4266) - - - 0.000001495 49.0
BYD3_k127_7678970_0 Berberine and berberine like - - - 6.208e-207 653.0
BYD3_k127_7678970_1 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001068 321.0
BYD3_k127_7678970_2 Cysteine synthase K01738 - 2.5.1.47 0.000000000000000000000000000000000000000000003706 166.0
BYD3_k127_7678970_3 - - - - 0.0000000000000000000000000000000000004942 150.0
BYD3_k127_7678970_4 - - - - 0.000001407 58.0
BYD3_k127_7714225_0 Acyl-CoA dehydrogenase, C-terminal domain K00249 - 1.3.8.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005146 415.0
BYD3_k127_7714225_1 Phosphotransferase enzyme family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007743 336.0
BYD3_k127_7714225_2 - - - - 0.0000000000000000000000000000000000000404 147.0
BYD3_k127_7719326_0 modulator of DNA gyrase K03592 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002472 523.0
BYD3_k127_7719326_1 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.000000000000000000000000000000000000000000000000000000000000000000003059 241.0
BYD3_k127_7719326_2 Belongs to the UPF0307 family K09889 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000000114 126.0
BYD3_k127_7719326_3 Virulence factor BrkB K07058 - - 0.0000000000000000000000003362 112.0
BYD3_k127_7719326_4 Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR) K01589 - 6.3.4.18 0.000000000000000000002595 95.0
BYD3_k127_7727821_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 3.028e-237 741.0
BYD3_k127_7727821_1 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001739 261.0
BYD3_k127_7727821_2 2Fe-2S iron-sulfur cluster binding domain K00240 - 1.3.5.1,1.3.5.4 0.00000000000000000000000000000000000000000000000000004205 187.0
BYD3_k127_7727821_3 negative regulator of sigma E activity K03598 - - 0.0000000000000000000000000000000000000000000000000008921 196.0
BYD3_k127_7727821_4 PFAM glutaredoxin 2 - - - 0.0000000002467 64.0
BYD3_k127_7727821_5 Flavinator of succinate dehydrogenase K09159 - - 0.000000000686 66.0
BYD3_k127_7727821_6 Negative regulator of sigma E activity - - - 0.000000001473 67.0
BYD3_k127_773246_0 Transcriptional regulator K05372 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001374 258.0
BYD3_k127_773246_1 Putative stress-induced transcription regulator - - - 0.00000000000000000000000000000007685 133.0
BYD3_k127_773246_2 Serine aminopeptidase, S33 - - - 0.0000000000000000000001528 99.0
BYD3_k127_7733474_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000002117 221.0
BYD3_k127_7733474_1 PFAM Formylglycine-generating sulfatase enzyme - - - 0.00000000000000000000000000000000000000000000000005346 184.0
BYD3_k127_7733474_2 - - - - 0.00000000006714 64.0
BYD3_k127_7791316_0 Acyl-CoA dehydrogenase, middle domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000203 569.0
BYD3_k127_7791316_1 cytochrome C peroxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000108 422.0
BYD3_k127_7791316_2 Belongs to the GST superfamily K00799 - 2.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000004856 263.0
BYD3_k127_7798987_0 MASE1 - - - 0.00000000000000000000000000000000000000000000000001472 202.0
BYD3_k127_7798987_1 uridine kinase K00876 - 2.7.1.48 0.0000000000000000000000000000000000000000000000000228 186.0
BYD3_k127_7798987_2 Two component transcriptional regulator, LuxR family K13041 - - 0.0000000000000000000000000000000000000000000000003952 182.0
BYD3_k127_7798987_3 Removes the phosphate from trehalose 6-phosphate to produce free trehalose K01087 GO:0000287,GO:0003674,GO:0003824,GO:0004805,GO:0005488,GO:0005975,GO:0005984,GO:0005991,GO:0005992,GO:0006793,GO:0006796,GO:0006950,GO:0006970,GO:0008150,GO:0008152,GO:0009058,GO:0009266,GO:0009311,GO:0009312,GO:0009409,GO:0009628,GO:0009987,GO:0016051,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019203,GO:0033554,GO:0034637,GO:0042578,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044262,GO:0046351,GO:0046872,GO:0050896,GO:0051716,GO:0070413,GO:0070415,GO:0070417,GO:0071704,GO:1901576 3.1.3.12 0.000000000000000000000000000000000000002217 158.0
BYD3_k127_7798987_4 Domain of unknown function (DUF5122) beta-propeller - - - 0.00000000000000002899 87.0
BYD3_k127_7798987_5 Transcriptional regulator - - - 0.00000000000001496 74.0
BYD3_k127_7799108_0 alkaline phosphatase K01113 - 3.1.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001354 420.0
BYD3_k127_7799108_1 PFAM peptidase M19 renal dipeptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002404 262.0
BYD3_k127_7799108_2 FR47-like protein - - - 0.000000000000000000000000000000000000000000000000000000000002864 213.0
BYD3_k127_7799154_0 Protein kinase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002005 450.0
BYD3_k127_7799154_1 COG3209 Rhs family protein - - - 0.00000000000000000000000000000000000000000000000000000000219 213.0
BYD3_k127_7799154_2 ECF sigma factor - - - 0.000000000000000000000000000000000000000000005275 170.0
BYD3_k127_7799154_3 - - - - 0.00000000000000000214 87.0
BYD3_k127_7799154_4 - - - - 0.0000139 54.0
BYD3_k127_7801340_0 HupE / UreJ protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008353 325.0
BYD3_k127_7801340_1 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001554 285.0
BYD3_k127_7801340_2 membrane-bound metal-dependent K01993,K07038 - - 0.00000000000000000000000000000000000000000007947 167.0
BYD3_k127_7801340_3 - - - - 0.0000000000000000006716 94.0
BYD3_k127_7803666_0 Dienelactone hydrolase family - - - 6.074e-281 876.0
BYD3_k127_7803666_1 Belongs to the arginase family K01476,K01480,K12255,K18459 - 3.5.3.1,3.5.3.11,3.5.3.17,3.5.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005163 511.0
BYD3_k127_7803666_2 RNA polymerase sigma factor, sigma-70 family K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003685 470.0
BYD3_k127_7803666_3 PFAM Ornithine cyclodeaminase mu-crystallin K01750 - 4.3.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001239 441.0
BYD3_k127_7803666_4 Aldo Keto reductase K05275 - 1.1.1.65 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001292 343.0
BYD3_k127_7803666_5 YCII-related domain - - - 0.0000000000000000000000000000000000000001579 153.0
BYD3_k127_7803666_6 YCII-related domain - - - 0.0000000000000000000000000004886 120.0
BYD3_k127_7803701_0 acyl-CoA dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005608 472.0
BYD3_k127_7803701_1 enoyl-CoA hydratase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001044 335.0
BYD3_k127_7803701_2 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000006261 250.0
BYD3_k127_7803701_3 Histidine kinase - - - 0.0000000001145 72.0
BYD3_k127_7826059_0 due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm K01869 - 6.1.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002399 409.0
BYD3_k127_7826059_1 TIGRFAM HAD-superfamily hydrolase, subfamily IA, variant 3 K20866 - 3.1.3.10 0.000000000000000000000000000000000000000000006598 175.0
BYD3_k127_7826059_2 COG1943 Transposase and inactivated derivatives - - - 0.0000000000000000000000000000000004626 133.0
BYD3_k127_7827634_0 Cytochrome c-type biogenesis protein CcmF C-terminal - - - 3.178e-234 742.0
BYD3_k127_7827634_1 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02195 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001713 292.0
BYD3_k127_7827634_2 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02194 - - 0.00000000000000000000000000000000000000000000000000000000000000192 227.0
BYD3_k127_7827634_3 Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH K02197 - - 0.00000000000000000000000000000000000000000000000003977 184.0
BYD3_k127_7827634_4 once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system K02193 - 3.6.3.41 0.00000000000000000000000000000000000000000001655 169.0
BYD3_k127_7830533_0 FimV C-terminal K08086 - - 0.000000000000000000000000000000000000000000000000000000000002057 235.0
BYD3_k127_7830533_1 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004073,GO:0006082,GO:0006520,GO:0006549,GO:0006553,GO:0006555,GO:0006566,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009081,GO:0009082,GO:0009085,GO:0009086,GO:0009088,GO:0009089,GO:0009097,GO:0009987,GO:0016053,GO:0016491,GO:0016620,GO:0016903,GO:0019752,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046451,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.2.1.11 0.000000000006265 65.0
BYD3_k127_7848679_0 alpha/beta hydrolase fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001826 432.0
BYD3_k127_7848679_1 acetyltransferase K00661 - 2.3.1.79 0.0000000000000000000000000000000000000000000000000000000000000000764 226.0
BYD3_k127_7848679_2 salt-induced outer membrane protein K07283 - - 0.0000000000000000000000000000000000000000000006373 175.0
BYD3_k127_7848679_3 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000005064 128.0
BYD3_k127_7848679_4 Protein of unknown function (DUF1109) - - - 0.0002636 51.0
BYD3_k127_7857675_0 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004034 567.0
BYD3_k127_7857675_1 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000000000000000004057 210.0
BYD3_k127_7872980_0 TonB dependent receptor K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000005355 257.0
BYD3_k127_7872980_1 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000008331 123.0
BYD3_k127_7873898_0 Prephenate dehydrogenase chorismate mutase K00210 - 1.3.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002658 388.0
BYD3_k127_7873898_1 Cytochrome C1 family K00413 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002344 266.0
BYD3_k127_7873898_2 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00412 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000007045 258.0
BYD3_k127_7873898_3 Stringent starvation protein A K03599 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001877 255.0
BYD3_k127_7873898_4 Catalyzes the oxidation of either pyridoxine 5'- phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP) K00275 - 1.4.3.5 0.00000000000000000000000000000000000000000000000000000000002546 213.0
BYD3_k127_7873898_5 Stringent starvation protein B K03600 - - 0.00000000000000000000000000000000001085 139.0
BYD3_k127_7885575_0 Pyridine nucleotide-disulphide oxidoreductase K17218 - 1.8.5.4 9.877e-209 656.0
BYD3_k127_7885575_1 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 1.072e-194 615.0
BYD3_k127_7885575_2 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001649 388.0
BYD3_k127_7885575_3 Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003157 340.0
BYD3_k127_7885575_4 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005429 329.0
BYD3_k127_7885575_5 transcriptional - - - 0.00000000000000000000000000002343 121.0
BYD3_k127_7885575_6 Protein of unknown function (DUF2892) - - - 0.00000000000000000000000003479 109.0
BYD3_k127_7887775_0 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004713 372.0
BYD3_k127_7887775_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001074 322.0
BYD3_k127_7887775_2 Zinc carboxypeptidase - - - 0.0000000000000000000003073 106.0
BYD3_k127_7887775_3 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.00000000000000000001361 96.0
BYD3_k127_7887775_4 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K07684 GO:0000976,GO:0001067,GO:0001130,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032991,GO:0032993,GO:0043565,GO:0044212,GO:0044424,GO:0044444,GO:0044464,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0062012,GO:0065007,GO:0080090,GO:0090352,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903314,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2001141 - 0.0000000001654 67.0
BYD3_k127_7899911_0 AAA domain (dynein-related subfamily) - - - 0.0000000000000000000000000000000000000000000000000000000000000001711 224.0
BYD3_k127_7899911_1 - - - - 0.0000000000000000000000000000000000000000000000002923 192.0
BYD3_k127_790492_0 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001327 508.0
BYD3_k127_790492_1 PFAM Aminotransferase class I and II K00842,K14155 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 4.4.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000336 303.0
BYD3_k127_790492_2 Binding-protein-dependent transport system inner membrane component K02053 - - 0.000000009679 57.0
BYD3_k127_7909513_0 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001646 303.0
BYD3_k127_7909513_1 WD40-like Beta Propeller Repeat - - - 0.000000000000000000000000000000000000000000000000000000000001896 220.0
BYD3_k127_7909513_2 Cytochrome P460 - - - 0.0000000000000000000000000000000000000000000000000000000002361 209.0
BYD3_k127_7909513_3 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.0000000000000000000000000000000000000000000000005075 177.0
BYD3_k127_7909513_4 - - - - 0.0000000000000000000000000000000011 136.0
BYD3_k127_7910295_0 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001081 443.0
BYD3_k127_7910295_1 alginic acid biosynthetic process K01729 - 4.2.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001151 440.0
BYD3_k127_7910295_2 Belongs to the UDP-N-acetylglucosamine 2-epimerase family K01791 - 5.1.3.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002953 274.0
BYD3_k127_7911143_0 receptor - - - 2.472e-210 679.0
BYD3_k127_7911143_1 Bacterial regulatory protein, Fis family K21405 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005777 426.0
BYD3_k127_7911143_2 Membrane - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003553 310.0
BYD3_k127_7911143_3 Pentapeptide repeats (9 copies) - - - 0.0000000000000000000000000000000000000009286 162.0
BYD3_k127_7911143_4 Coenzyme PQQ synthesis protein D (PqqD) - - - 0.0000000000001835 74.0
BYD3_k127_7921298_0 Protein of unknown function (DUF3417) K00688 - 2.4.1.1 7.142e-267 831.0
BYD3_k127_7921298_1 COG0474 Cation transport ATPase K01531 - 3.6.3.2 8.964e-267 852.0
BYD3_k127_7921298_2 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 2.496e-237 749.0
BYD3_k127_7921298_3 Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP K00763 GO:0001666,GO:0003674,GO:0003824,GO:0004516,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009605,GO:0009607,GO:0009628,GO:0009987,GO:0016020,GO:0016740,GO:0016757,GO:0016763,GO:0016874,GO:0016879,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019365,GO:0019438,GO:0019637,GO:0019674,GO:0034355,GO:0034641,GO:0034654,GO:0036293,GO:0043094,GO:0043173,GO:0043207,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044403,GO:0044419,GO:0044464,GO:0046483,GO:0046496,GO:0047280,GO:0050896,GO:0051186,GO:0051188,GO:0051701,GO:0051704,GO:0051707,GO:0055086,GO:0070482,GO:0071704,GO:0071944,GO:0072524,GO:0072525,GO:0075136,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001104 494.0
BYD3_k127_7921298_4 Possible lysine decarboxylase K06966 - 3.2.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001873 385.0
BYD3_k127_7921298_5 BON domain K04065 - - 0.000000000000000000000000000000000000000000000000000000000008761 214.0
BYD3_k127_7921298_6 SNARE associated Golgi protein - - - 0.000000000000000000000000000000000000000000003385 172.0
BYD3_k127_7921298_7 Phosphoribosyl transferase domain K07100 - - 0.000000000000000000000000000001562 126.0
BYD3_k127_7925228_0 Phytanoyl-CoA dioxygenase (PhyH) - - - 0.000000000000000000000000000000000000000000000000000000000000001212 229.0
BYD3_k127_7925228_1 Phytanoyl-CoA dioxygenase (PhyH) - - - 0.000000000000000000000000000004498 135.0
BYD3_k127_7925228_2 dioxygenase activity - - - 0.000000000000000000000001525 111.0
BYD3_k127_7925600_0 Binding-protein-dependent transport system inner membrane component K02038 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008644 387.0
BYD3_k127_7925600_1 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005019 327.0
BYD3_k127_8022685_0 histidine kinase A domain protein - - - 2.055e-291 904.0
BYD3_k127_8022685_1 COG0659 Sulfate permease and related transporters (MFS superfamily) K03321 - - 0.0000000000000000000000000000000000000000000000000000000000001374 221.0
BYD3_k127_8022685_2 Ca2 -binding protein (EF-Hand superfamily - - - 0.0000001167 60.0
BYD3_k127_8023417_0 Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively K01556 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006568,GO:0006569,GO:0006576,GO:0006586,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009072,GO:0009074,GO:0009308,GO:0009310,GO:0009987,GO:0016054,GO:0016787,GO:0016822,GO:0016823,GO:0019439,GO:0019441,GO:0019752,GO:0030429,GO:0032787,GO:0034641,GO:0042180,GO:0042402,GO:0042430,GO:0042436,GO:0042537,GO:0043420,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0044424,GO:0044464,GO:0046218,GO:0046395,GO:0046483,GO:0046700,GO:0070189,GO:0071704,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 3.7.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001154 495.0
BYD3_k127_8023417_1 Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP K01525 - 3.6.1.41 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002154 313.0
BYD3_k127_8023417_2 3-hydroxyanthranilic acid dioxygenase K00452 - 1.13.11.6 0.000000000000000000000000000000000000000000000000000000000000001 225.0
BYD3_k127_8023417_3 arylformamidase activity - - - 0.00000000000000000000000000000000000000000000000001294 194.0
BYD3_k127_8023417_4 COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases K00486 GO:0003674,GO:0003824,GO:0004497,GO:0008150,GO:0008152,GO:0009058,GO:0016491,GO:0019748,GO:0044550,GO:0055114 1.14.13.9 0.000000000000000000000000000000000000004517 153.0
BYD3_k127_8038113_0 TIGRFAM asparagine synthase (glutamine-hydrolyzing) K01953 - 6.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002034 481.0
BYD3_k127_8038113_1 Glycosyltransferase Family 4 K13668 - 2.4.1.346 0.000000000000001108 79.0
BYD3_k127_8038113_2 lysyltransferase activity - - - 0.000000000002963 76.0
BYD3_k127_8042051_0 PFAM AMP-dependent synthetase and ligase - - - 3.562e-197 628.0
BYD3_k127_8042051_1 Belongs to the type-B carboxylesterase lipase family K03929 - - 0.00000000000000000000000000000000000000004112 153.0
BYD3_k127_8061963_0 Na( ) H( ) antiporter that extrudes sodium in exchange for external protons K03314 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005764 541.0
BYD3_k127_8061963_1 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease K02342 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000003889 243.0
BYD3_k127_8121158_0 thiolester hydrolase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004943 262.0
BYD3_k127_8121158_1 Uncharacterized conserved protein (DUF2277) - - - 0.0000000000000000000000000000000009662 131.0
BYD3_k127_8121158_2 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.0000000000000000972 81.0
BYD3_k127_8121158_3 Domain of unknown function (DUF4142) K08995 - - 0.0000000000001197 79.0
BYD3_k127_8121158_4 COG3678 P pilus assembly Cpx signaling pathway, periplasmic inhibitor zinc-resistance associated protein - - - 0.000005297 53.0
BYD3_k127_8138749_0 oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002678 384.0
BYD3_k127_8138749_1 Membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000006662 252.0
BYD3_k127_8138749_2 membrane protein domain - - - 0.0000000000000000000000000000000000000000000000001406 187.0
BYD3_k127_8138749_3 oxidoreductases (related to K19265 - - 0.0000000000004392 73.0
BYD3_k127_8156696_0 Glucose dehydrogenase K00117 - 1.1.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000313 398.0
BYD3_k127_8156696_1 Cell shape determining protein MreB Mrl - - - 0.00000000000000222 77.0
BYD3_k127_8157104_0 peptidase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001419 269.0
BYD3_k127_8157104_1 TonB dependent receptor - - - 0.000000000000000000000000000000000000000000001702 180.0
BYD3_k127_8157587_0 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007462 355.0
BYD3_k127_8157587_1 Protein of unknown function (DUF692) K09930 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005415 317.0
BYD3_k127_8157587_2 Histidine-specific methyltransferase, SAM-dependent K18911 - 2.1.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001918 314.0
BYD3_k127_8157587_3 DinB superfamily - - - 0.000000000000000000000000000000000000000000000000000001107 193.0
BYD3_k127_8157587_4 DoxX - - - 0.000000000000000000000000000000000001686 148.0
BYD3_k127_8157587_5 Putative DNA-binding domain - - - 0.00000000000000000000000000000000001415 146.0
BYD3_k127_8157587_6 Predicted integral membrane protein (DUF2282) - - - 0.0000000000000000003478 89.0
BYD3_k127_81585_0 Alcohol dehydrogenase GroES-like domain K00001 - 1.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004552 392.0
BYD3_k127_81585_1 Molecular chaperone. Has ATPase activity K04079 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006950,GO:0006974,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0033554,GO:0042623,GO:0042802,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051716 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004589 374.0
BYD3_k127_81585_2 Transcriptional Regulator, MerR family - - - 0.00000000000000000000007819 102.0
BYD3_k127_8160912_0 Belongs to the GARS family K01945,K13713 GO:0000166,GO:0003674,GO:0003824,GO:0004637,GO:0005488,GO:0005524,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016874,GO:0016879,GO:0016887,GO:0017076,GO:0017111,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0033554,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0050896,GO:0051716,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.3.2.6,6.3.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002797 496.0
BYD3_k127_8160912_1 Serine threonine protein kinase - - - 0.00000000000000000000000000000000000000000000000000000002605 221.0
BYD3_k127_8160912_2 Responsible for the transport of dicarboxylates such as succinate, fumarate, and malate from the periplasm across the membrane K11103 - - 0.0000000000000000000000000000000000000000000000000000002846 195.0
BYD3_k127_8160912_3 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000009344 156.0
BYD3_k127_8160912_4 - - - - 0.00006771 53.0
BYD3_k127_8183447_0 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K03307 - - 3.624e-238 745.0
BYD3_k127_8183447_1 TAP-like protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004095 412.0
BYD3_k127_8183447_2 Belongs to the proline racemase family K01777 - 5.1.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001689 404.0
BYD3_k127_8183447_3 Acyl carrier protein phosphodiesterase - - - 0.00000000000000000000000000000000000000000000000000000001312 205.0
BYD3_k127_8183447_4 COGs COG2423 ornithine cyclodeaminase mu-crystallin homolog K01750,K21721 - 1.5.1.51,4.3.1.12 0.0000000000000000000000000000000000000000008119 162.0
BYD3_k127_8183447_5 KDPG and KHG aldolase K01631 - 4.1.2.21 0.0000000000000002711 79.0
BYD3_k127_8201057_0 COG1629 Outer membrane receptor proteins, mostly Fe transport - - - 0.0 1029.0
BYD3_k127_8201057_1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 1.854e-319 993.0
BYD3_k127_8201057_2 epimerase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004272 329.0
BYD3_k127_8201057_3 OmpA-like transmembrane domain K03286 - - 0.0000000000000002815 87.0
BYD3_k127_8221733_0 Transcriptional regulatory protein, C terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000004836 235.0
BYD3_k127_8221733_1 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.0000000000000000000000000000000000000000000000000009501 202.0
BYD3_k127_8221733_2 TonB-dependent receptor - - - 0.000000000000000000000000000000001131 134.0
BYD3_k127_8230912_0 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003299 528.0
BYD3_k127_8230912_1 Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second K01958 - 6.4.1.1 0.0000000000000000000002274 97.0
BYD3_k127_8244518_0 Clp protease K01358 - 3.4.21.92 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002584 316.0
BYD3_k127_8244518_1 metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain K07050 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001188 248.0
BYD3_k127_8244518_2 MAPEG family - - - 0.000000000000000000000000000000000000000000000000000002813 193.0
BYD3_k127_8244518_3 transferase activity, transferring acyl groups - - - 0.00000000000000000001824 93.0
BYD3_k127_8252925_0 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005269 426.0
BYD3_k127_8252925_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002529 372.0
BYD3_k127_8252925_2 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000142 365.0
BYD3_k127_8252925_3 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.000000000000000000000000000000000000005782 147.0
BYD3_k127_8252925_4 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.00000000000000844 76.0
BYD3_k127_8252925_5 belongs to the thioredoxin family K03619,K05838 - - 0.000442 53.0
BYD3_k127_8256407_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K07303 - 1.3.99.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001106 351.0
BYD3_k127_8256407_1 Transglycosylase SLT domain - - - 0.000000000000000000000000000000000000000000628 162.0
BYD3_k127_8279385_0 Protein tyrosine kinase K08884 - 2.7.11.1 0.000000007053 68.0
BYD3_k127_8288656_0 Histidine kinase - - - 8.297e-216 685.0
BYD3_k127_8288656_1 TonB-dependent receptor K02014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003676 527.0
BYD3_k127_8288656_2 Domain of unknown function (DUF4154) - - - 0.0000000000000000000000000000000000001802 163.0
BYD3_k127_8288656_3 helix_turn_helix, arabinose operon control protein - - - 0.000002974 56.0
BYD3_k127_8296184_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003467 370.0
BYD3_k127_8296184_1 PFAM Serine dehydratase alpha chain K01752 - 4.3.1.17 0.0000000000000000000000000000000000000000001566 159.0
BYD3_k127_8296184_2 Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P-ring assembly K02386 - - 0.00000000001309 66.0
BYD3_k127_8296184_3 Flagellar biosynthesis type III secretory pathway chaperone K02399 - - 0.000000124 59.0
BYD3_k127_8296184_4 COG2747 Negative regulator of flagellin synthesis (anti-sigma28 factor) K02398 - - 0.00002225 51.0
BYD3_k127_8297126_0 DEAD DEAH box helicase K03724 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004912 547.0
BYD3_k127_8297126_1 Putative auto-transporter adhesin, head GIN domain - - - 0.000000000000000000000000002761 122.0
BYD3_k127_8299241_0 TonB dependent receptor K02014 - - 0.000000000000000000000000000000000000000000000000000000006771 209.0
BYD3_k127_8306386_0 Carboxypeptidase - - - 1.491e-228 722.0
BYD3_k127_8306386_1 PFAM HNH endonuclease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005296 294.0
BYD3_k127_8306386_2 Exodeoxyribonuclease IX - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000158 275.0
BYD3_k127_8306386_3 PFAM NUDIX hydrolase K03426 - 3.6.1.22 0.000000000000000000000000000000000000000000000000000000000000268 217.0
BYD3_k127_8306386_4 Tetratricopeptide repeat - - - 0.0000000001874 69.0
BYD3_k127_8308551_0 Belongs to the anaerobic coproporphyrinogen-III oxidase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000189 363.0
BYD3_k127_8308551_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007573 364.0
BYD3_k127_8308551_2 GNAT family acetyltransferase - - - 0.0000000000000000000001072 102.0
BYD3_k127_8328644_0 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003991 519.0
BYD3_k127_8328644_1 COG1228 Imidazolonepropionase and related amidohydrolases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002107 447.0
BYD3_k127_8328644_2 Aminotransferase class-V - - - 0.00000000000000000000000000000000000000000000000000000000000000001972 229.0
BYD3_k127_8344590_0 Helicase associated domain (HA2) Add an annotation K03578 - 3.6.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002996 504.0
BYD3_k127_8344590_1 Histidine kinase K07637 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004024 298.0
BYD3_k127_8363496_0 peptidase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004956 420.0
BYD3_k127_8363496_1 Aminotransferase class I and II - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002467 339.0
BYD3_k127_8363496_2 Sigma-70, region 4 - - - 0.00000000000000000000000000000000000000000000001857 175.0
BYD3_k127_8363496_5 Amidohydrolase family - - - 0.0005136 48.0
BYD3_k127_8374886_0 acetyl-coa hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001995 458.0
BYD3_k127_8374886_1 PFAM Fructosamine - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002399 289.0
BYD3_k127_8374886_2 - - - - 0.000000000000000000000001984 113.0
BYD3_k127_8403533_0 3-hydroxyacyl-coa dehydrogenase K01782 - 1.1.1.35,4.2.1.17,5.1.2.3 5.706e-211 675.0
BYD3_k127_8403533_1 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases - - - 0.00000000000000000000000000000000000000000000000000000000007436 214.0
BYD3_k127_8411969_0 TIGRFAM A G-specific adenine glycosylase K03575 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008774 401.0
BYD3_k127_8411969_1 helix_turn_helix, arabinose operon control protein - - - 0.000000000006395 70.0
BYD3_k127_8411969_2 Predicted membrane protein (DUF2306) - - - 0.000005539 52.0
BYD3_k127_8417862_0 Belongs to the enoyl-CoA hydratase isomerase family K00022,K07514 - 1.1.1.35,4.2.1.17,5.3.3.8 2.101e-296 916.0
BYD3_k127_8432544_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1229.0
BYD3_k127_8432544_1 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.000000000000000000000000000000000000000000000000000000004877 203.0
BYD3_k127_8448937_0 Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily K00121 - 1.1.1.1,1.1.1.284 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005241 443.0
BYD3_k127_8448937_1 serine protease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005383 343.0
BYD3_k127_8448937_2 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000000000000000008451 211.0
BYD3_k127_8448937_3 Bacterial protein of unknown function (Gcw_chp) - - - 0.00000000000000000000000000000000000001506 152.0
BYD3_k127_8448937_4 pfam nudix - - - 0.00000000000000000000000000000000000001938 162.0
BYD3_k127_8448937_5 Putative zinc-finger - - - 0.00000000000001684 83.0
BYD3_k127_8456606_0 KR domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005707 283.0
BYD3_k127_8456606_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001355 269.0
BYD3_k127_8456606_2 - - - - 0.0000000000000000000000000000000000000000000000000000000006467 205.0
BYD3_k127_8456606_3 - - - - 0.00000000000000000000000000000000000000000000000000006899 192.0
BYD3_k127_8456606_4 - - - - 0.000000000000000000000000000000000008089 142.0
BYD3_k127_8456606_5 SnoaL-like domain - - - 0.000000000000305 77.0
BYD3_k127_8459001_0 COG0791 Cell wall-associated hydrolases (invasion-associated proteins) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005097 502.0
BYD3_k127_8459001_1 Protein of unknown function (DUF819) - - - 0.000000000000000000000000000000000000001351 161.0
BYD3_k127_8465077_0 Large extracellular alpha-helical protein K06894 - - 0.0 1262.0
BYD3_k127_8465077_1 Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties K00688 - 2.4.1.1 0.00000000000000000000000000000000000000005621 162.0
BYD3_k127_8465077_2 FOG Ankyrin repeat K06867 - - 0.000001181 59.0
BYD3_k127_8467647_0 1,4-alpha-glucan branching enzyme activity K01236 - 3.2.1.141 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000206 551.0
BYD3_k127_8467647_1 Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs) K03669 GO:0005575,GO:0016020 - 0.000000000000000000000000000000009808 134.0
BYD3_k127_8467925_0 Specifically methylates the N7 position of guanine in position 527 of 16S rRNA K03501 - 2.1.1.170 0.00000000000000000000000000000000000000000000000000009809 194.0
BYD3_k127_8467925_1 Specifically methylates the N7 position of guanine in position 527 of 16S rRNA K03501 - 2.1.1.170 0.0000000000000000000000000000000000000102 151.0
BYD3_k127_8467925_2 PFAM Alcohol dehydrogenase K00344 - 1.6.5.5 0.0000000000000000000000001303 107.0
BYD3_k127_8467925_3 Cobyrinic acid ac-diamide synthase K03496 - - 0.00000000000000000000001353 100.0
BYD3_k127_8469095_0 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003685 390.0
BYD3_k127_8469095_1 Protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000186 364.0
BYD3_k127_8469095_2 Transcriptional regulatory protein, C terminal K02483,K07663 GO:0000976,GO:0000984,GO:0000986,GO:0000987,GO:0001017,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0005488,GO:0005515,GO:0006355,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0019219,GO:0019222,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0042802,GO:0043565,GO:0044212,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1902680,GO:1903506,GO:1903508,GO:1990837,GO:2000112,GO:2001141 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008898 336.0
BYD3_k127_8469095_3 Protein of unknown function (DUF1318) - - - 0.00000000000000000000000000000000000000000000000000000000003089 211.0
BYD3_k127_8469095_4 Methyltransferase - - - 0.000000000000000000000000000000000008359 146.0
BYD3_k127_8469095_5 - - - - 0.00000000000000000000000000000006231 136.0
BYD3_k127_8471055_0 Bilirubin oxidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003783 293.0
BYD3_k127_8471055_1 ABC transporter - - - 0.00000000000000000000000000000000000000000000000000000000619 205.0
BYD3_k127_8471055_2 Transcriptional regulator - - - 0.00000000000000000000000000000000003842 142.0
BYD3_k127_8471055_3 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K02199 - - 0.000000000000000000000000000000363 129.0
BYD3_k127_8471055_4 - - - - 0.00000000000000000001323 103.0
BYD3_k127_8471307_0 Cytochrome P450 K00493 - 1.14.14.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005586 382.0
BYD3_k127_8471307_1 Acetylornithine deacetylase Succinyl-diaminopimelate - - - 0.0000000000000000000000000000000000000000000000000000007641 208.0
BYD3_k127_8473445_0 Protein tyrosine kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002029 524.0
BYD3_k127_8473445_1 transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001225 338.0
BYD3_k127_8473445_2 TonB dependent receptor K02014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001438 315.0
BYD3_k127_8473445_3 ECF sigma factor - - - 0.00000000000000000000000000000000000000000000001053 177.0
BYD3_k127_8473445_4 Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA K03439 - 2.1.1.33 0.0000000000000000004212 98.0
BYD3_k127_8473445_5 - - - - 0.0001023 50.0
BYD3_k127_848477_0 Protein of unknown function (DUF1624) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002743 435.0
BYD3_k127_848477_1 Uncharacterized protein conserved in bacteria (DUF2058) K09912 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000000000000007623 149.0
BYD3_k127_848477_2 - - - - 0.000008758 59.0
BYD3_k127_8498540_0 COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases K05712 - 1.14.13.127 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002176 445.0
BYD3_k127_8498540_1 WYL domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004631 315.0
BYD3_k127_8498540_2 Fic/DOC family - - - 0.00000000000000000000000000000000000000000005425 175.0
BYD3_k127_8498540_3 Domain of unknown function (DUF3806) - - - 0.0000000000000000000518 94.0
BYD3_k127_8498540_4 ParE toxin of type II toxin-antitoxin system, parDE K19092 - - 0.00002251 52.0
BYD3_k127_8500504_0 AAA domain K07028 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009448 388.0
BYD3_k127_8500504_1 - - - - 0.00000000000000000000000000000000000000000000000000827 192.0
BYD3_k127_8500504_2 HlyD family secretion protein K02005 - - 0.00000000000000000000000000000000004828 136.0
BYD3_k127_8503051_0 SMART Elongator protein 3 MiaB NifB - - - 1.893e-230 725.0
BYD3_k127_8503051_1 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03696 - - 6.317e-204 676.0
BYD3_k127_8503051_10 Winged helix DNA-binding domain - - - 0.000000000000000000000000000000006041 131.0
BYD3_k127_8503051_11 ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component - - - 0.00000000000000001065 90.0
BYD3_k127_8503051_2 phosphate-selective porin O and P - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001872 449.0
BYD3_k127_8503051_3 COG0457 FOG TPR repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003578 420.0
BYD3_k127_8503051_4 Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K01501,K01502 GO:0000257,GO:0003674,GO:0003824,GO:0008150,GO:0009987,GO:0016043,GO:0016787,GO:0016810,GO:0016815,GO:0018762,GO:0022607,GO:0043933,GO:0044085,GO:0051259,GO:0051260,GO:0065003,GO:0071840 3.5.5.1,3.5.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006545 383.0
BYD3_k127_8503051_5 Periplasmic solute binding protein K02077 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002502 341.0
BYD3_k127_8503051_6 ABC-3 protein K02075 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002035 282.0
BYD3_k127_8503051_7 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806,K12503 GO:0002094,GO:0003674,GO:0003824,GO:0004659,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006066,GO:0006629,GO:0006720,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016093,GO:0016094,GO:0016740,GO:0016765,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046165,GO:0071704,GO:1901576,GO:1901615,GO:1901617 2.5.1.31,2.5.1.68 0.00000000000000000000000000000000000000000000000000000000000000009304 230.0
BYD3_k127_8503051_8 - - - - 0.0000000000000000000000000000000000000000000000000000000000005882 222.0
BYD3_k127_8503051_9 undecaprenyl-phosphate glucose phosphotransferase activity - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000002984 191.0
BYD3_k127_8516195_0 Beta-lactamase K17836 - 3.5.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003951 381.0
BYD3_k127_8516195_1 Zn-dependent protease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002529 351.0
BYD3_k127_8516195_2 - - - - 0.00000000000000000000000000000000000000000000000000308 188.0
BYD3_k127_8516195_3 ASPIC and UnbV - - - 0.000000000000000000000000000000000000000000001808 188.0
BYD3_k127_8516195_4 Penicillinase repressor - - - 0.00000000000000000000000000000000000000006517 156.0
BYD3_k127_8516195_5 BlaR1 peptidase M56 - - - 0.00000000000000000000000000000000000000009645 165.0
BYD3_k127_8516195_6 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.0000000000000000000000002577 109.0
BYD3_k127_8516195_7 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.000000000004898 78.0
BYD3_k127_8527203_0 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002869 374.0
BYD3_k127_8527203_1 Pfam Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007548 338.0
BYD3_k127_8527203_2 COG0467 RecA-superfamily ATPases implicated in signal K08482 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007234 271.0
BYD3_k127_8527203_3 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001227 246.0
BYD3_k127_8527203_4 L-gulonolactone oxidase-like K00103,K00225 - 1.1.3.8,1.3.2.3 0.000000000000000000000000000000000000000000000000000009487 193.0
BYD3_k127_8532006_0 alpha-glucosidase K01187 - 3.2.1.20 1.905e-249 775.0
BYD3_k127_8532006_1 Periplasmic binding protein domain K02529 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000048 479.0
BYD3_k127_8532006_2 Extradiol ring-cleavage dioxygenase K15777 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003204 406.0
BYD3_k127_8532006_3 PFAM Glyoxalase bleomycin resistance protein dioxygenase - - - 0.000000000000000000000000000000000000000000000000005247 184.0
BYD3_k127_8532006_4 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.0000000006494 66.0
BYD3_k127_8533020_0 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008166 416.0
BYD3_k127_8533020_1 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 - 5.4.99.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003867 319.0
BYD3_k127_8533020_2 FimV C-terminal K08086 - - 0.00000004283 54.0
BYD3_k127_8538730_0 Fatty acid desaturase K10255 - 1.14.19.23,1.14.19.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005857 445.0
BYD3_k127_8538730_1 - - - - 0.000000000000000000000000000000000000000000000000006738 197.0
BYD3_k127_8544514_0 glutamate synthase K00284 - 1.4.7.1 0.0 1079.0
BYD3_k127_8547076_0 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000001342 195.0
BYD3_k127_8547076_1 Tetratricopeptide repeat - - - 0.0000000000000000000002237 105.0
BYD3_k127_8562817_0 Dehydrogenase K00117 - 1.1.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006986 464.0
BYD3_k127_8562817_1 Response regulator of the LytR AlgR family - - - 0.000000000000000000001557 94.0
BYD3_k127_8562817_2 Response regulator of the LytR AlgR family - - - 0.000004629 49.0
BYD3_k127_8572415_0 Asparagine synthase, glutamine-hydrolyzing K01953 - 6.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001146 423.0
BYD3_k127_8572415_1 Sulfatase - - - 0.00000000143 71.0
BYD3_k127_8576183_0 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02621 - - 1.556e-262 822.0
BYD3_k127_8576183_1 PFAM EAL domain K21025 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001265 344.0
BYD3_k127_8583612_0 COG1960 Acyl-CoA dehydrogenases K00253 - 1.3.8.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005416 605.0
BYD3_k127_8583612_1 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) K01969 - 6.4.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001015 497.0
BYD3_k127_8583612_2 Transcriptional regulator K05799 - - 0.000000000003674 70.0
BYD3_k127_8593131_0 NAD(FAD)-dependent dehydrogenases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006589 309.0
BYD3_k127_8593131_1 protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000007817 273.0
BYD3_k127_8611081_0 SnoaL-like domain - - - 0.0000000000000000000000000000000000000000001033 164.0
BYD3_k127_8611081_1 PFAM Beta-lactamase - - - 0.000000000000000000000000000000000001832 147.0
BYD3_k127_8613873_0 Domain of unknown function (DUF3520) K07114 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001862 256.0
BYD3_k127_8613873_1 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000000003757 166.0
BYD3_k127_861432_0 alpha beta K06889 - - 0.0000000000000000000000000000000000000000000000000000000000002376 229.0
BYD3_k127_861432_1 Phosphatase K07093 - - 0.0000000000000000000000000000000000000000004881 166.0
BYD3_k127_8620262_0 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein K12136 - - 1.035e-195 621.0
BYD3_k127_8620262_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000701 261.0
BYD3_k127_8620262_2 - - - - 0.00000000002526 64.0
BYD3_k127_8631607_0 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction K00925 - 2.7.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001105 331.0
BYD3_k127_8631607_1 Aminoglycoside 3-N-acetyltransferase K00662 - 2.3.1.81 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003498 306.0
BYD3_k127_8631607_2 aldehyde-lyase activity K01621 - 4.1.2.22,4.1.2.9 0.00000000000000000000000000000000000000004663 152.0
BYD3_k127_8636332_0 Catalyzes the NAD( )-dependent oxidation of L-threonine to 2-amino-3-ketobutyrate K00060 GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006563,GO:0006564,GO:0006566,GO:0006567,GO:0006807,GO:0008150,GO:0008152,GO:0008198,GO:0008270,GO:0008652,GO:0008743,GO:0009056,GO:0009058,GO:0009063,GO:0009066,GO:0009068,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016054,GO:0016491,GO:0016614,GO:0016616,GO:0019752,GO:0030145,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046395,GO:0046870,GO:0046872,GO:0046914,GO:0055114,GO:0071704,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606,GO:1901607 1.1.1.103 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004979 530.0
BYD3_k127_8636332_1 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00639,K00652 - 2.3.1.29,2.3.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002825 336.0
BYD3_k127_8637045_0 Converts GTP to 7,8-dihydroneopterin triphosphate K09007 - 3.5.4.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000002828 261.0
BYD3_k127_8637045_1 Cyclic nucleotide-monophosphate binding domain - - - 0.00000000000000000000000000000000000000000000000000004142 195.0
BYD3_k127_8637045_2 NmrA-like family - - - 0.000000000000000000000007012 114.0
BYD3_k127_8637045_3 helix_turn_helix, arabinose operon control protein - - - 0.00000000000000001506 97.0
BYD3_k127_8637045_4 belongs to the thioredoxin family - - - 0.00000001885 66.0
BYD3_k127_8643182_0 Encapsulating protein for peroxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002872 323.0
BYD3_k127_8643182_1 Evidence 4 Homologs of previously reported genes of K09700 - - 0.0000000000000000000000000000000000000002977 152.0
BYD3_k127_8643182_2 - - - - 0.00000000002232 71.0
BYD3_k127_8643182_3 Putative glutamine amidotransferase - - - 0.0000004838 58.0
BYD3_k127_8643182_4 Histidine kinase K13924 - 2.1.1.80,3.1.1.61 0.00000635 55.0
BYD3_k127_8666423_0 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000251 260.0
BYD3_k127_8666423_1 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.00000000000000000000000000000000000000000000000000000004401 206.0
BYD3_k127_8666423_2 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464,GO:0097159,GO:1901363 - 0.00000000000000000000000000000000000001195 149.0
BYD3_k127_8690784_0 Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000000000000000008536 153.0
BYD3_k127_8690784_1 HlyD family secretion protein K01993 - - 0.000000000000000000000000000000000001469 155.0
BYD3_k127_8716287_0 Alcohol dehydrogenase GroES-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008982 354.0
BYD3_k127_8716287_1 signal peptide protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004213 274.0
BYD3_k127_8716287_2 - - - - 0.000000000000000000000000000000003086 142.0
BYD3_k127_8716287_3 - - - - 0.0000000000000003546 79.0
BYD3_k127_8716287_4 PFAM transport-associated K04065 - - 0.00000000001025 65.0
BYD3_k127_8717456_0 transmembrane transporter activity K18138 - - 2.645e-236 737.0
BYD3_k127_8717456_1 SnoaL-like domain K07023 - - 0.000000000000000000000000000000000235 142.0
BYD3_k127_8735939_0 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009999 319.0
BYD3_k127_8735939_1 Histidine kinase - - - 0.00000000000000001284 86.0
BYD3_k127_8735939_2 Conserved TM helix - - - 0.00001094 48.0
BYD3_k127_8772824_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K18138 - - 0.0 1168.0
BYD3_k127_8772824_1 PFAM extracellular solute-binding protein family 1 K05813 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001285 452.0
BYD3_k127_8775696_0 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000538 558.0
BYD3_k127_8775696_1 Permease MlaE K02066 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001776 293.0
BYD3_k127_8775696_2 ABC transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001263 279.0
BYD3_k127_8775696_3 Mechanosensitive ion channel - - - 0.000000000000000000000005939 112.0
BYD3_k127_877675_0 Glutathione-dependent formaldehyde-activating enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000008797 247.0
BYD3_k127_877675_1 Uncharacterised protein family UPF0066 - - - 0.000000000000000000000000000000000000000000000000002133 186.0
BYD3_k127_877675_2 Carboxymuconolactone decarboxylase family - - - 0.000000000000000000000000000000000000000001062 172.0
BYD3_k127_877675_3 Carboxymuconolactone decarboxylase family - - - 0.000000000000000000000000000000000000002115 162.0
BYD3_k127_877675_4 TIGRFAM phage conjugal plasmid C-4 type zinc finger protein, TraR family - - - 0.000000000000000000000000000000000000004576 147.0
BYD3_k127_877675_5 ATPase domain of DNA mismatch repair MUTS family - - - 0.0000000000000000000000000005696 125.0
BYD3_k127_8777652_0 transcriptional Regulator, LysR family - - - 0.0000000000000000000000000000000000000000000009621 180.0
BYD3_k127_8777652_1 - - - - 0.0000000000002431 74.0
BYD3_k127_8782580_0 Tfp pilus assembly protein tip-associated adhesin K02674 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002397 585.0
BYD3_k127_8782580_1 COG4968 Tfp pilus assembly protein PilE K02655 - - 0.00000000000000002158 87.0
BYD3_k127_8782580_2 Type IV Pilus-assembly protein W K02672 - - 0.0000000000008202 79.0
BYD3_k127_8782580_3 Type IV pilus assembly protein PilX C-term K02673 - - 0.00003168 53.0
BYD3_k127_8782856_0 PLD-like domain - - - 0.0000000000000000000000000001504 118.0
BYD3_k127_8782856_1 ABC-type transport auxiliary lipoprotein component K18480 - - 0.000000000000001269 85.0
BYD3_k127_8782856_2 ABC-type transport system involved in resistance to organic solvents periplasmic component K02067 - - 0.00000009226 61.0
BYD3_k127_8794781_0 ATPase domain of DNA mismatch repair MUTS family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001739 430.0
BYD3_k127_8794781_1 Efflux transporter, RND family, MFP subunit K02005 - - 0.0000000000000000000000000000000000000000000000000000000001459 213.0
BYD3_k127_8794781_2 FR47-like protein - - - 0.000000000000000000000000000000001284 136.0
BYD3_k127_8795533_0 Serves to protect cells from the toxic effects of hydrogen peroxide K03781 - 1.11.1.6 2.036e-302 934.0
BYD3_k127_8795908_0 ABC transporter - - - 2.584e-211 664.0
BYD3_k127_8795908_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002445 291.0
BYD3_k127_8795908_2 Membrane dipeptidase (Peptidase family M19) K01273 - 3.4.13.19 0.00000000000000000000000000000000000000000000000000000008866 205.0
BYD3_k127_8798154_0 Serine threonine protein kinase K08282,K11916,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000219 362.0
BYD3_k127_8798154_1 lysozyme - - - 0.00000000000000000000000000000000000000000000000000000001293 211.0
BYD3_k127_8798154_2 Helix-turn-helix XRE-family like proteins K07729 - - 0.00000000000000000000000005819 115.0
BYD3_k127_8798154_3 - - - - 0.000000000000000000001445 99.0
BYD3_k127_8800672_0 COG0457 FOG TPR repeat - - - 2.199e-265 844.0
BYD3_k127_8800672_1 receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001121 567.0
BYD3_k127_8800672_2 amidohydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007231 355.0
BYD3_k127_8800672_3 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated K00567 - 2.1.1.63 0.000000000000000000000000000000000000000000000000000002035 197.0
BYD3_k127_8805356_0 Prokaryotic glutathione synthetase, ATP-grasp domain K03802 - 6.3.2.29,6.3.2.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002889 514.0
BYD3_k127_8805356_1 Mur ligase middle domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001471 496.0
BYD3_k127_8809128_0 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007536 421.0
BYD3_k127_8809128_1 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004513 383.0
BYD3_k127_8809128_2 COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductases K00344 - 1.6.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002008 384.0
BYD3_k127_8809128_3 Belongs to the P(II) protein family K04751,K04752 - - 0.00000000000000000000000000000000000000000000000001472 184.0
BYD3_k127_8809128_4 HlyD family secretion protein K01993 - - 0.0000000000000000000000005058 106.0
BYD3_k127_8809128_5 Glutathione S-transferase, C-terminal domain K00799 - 2.5.1.18 0.000000000001872 67.0
BYD3_k127_8810252_0 Fungalysin metallopeptidase (M36) K01417 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001411 336.0
BYD3_k127_8812669_0 of the RND superfamily K07003 - - 6.418e-200 643.0
BYD3_k127_8812669_1 WD40-like Beta Propeller Repeat - - - 0.000000000000000000000000000000000000000000000000000006188 217.0
BYD3_k127_8812669_2 MMPL family K07003 - - 0.00000000000000000000000000000000000000000000000002478 192.0
BYD3_k127_8812669_3 Sh3 type 3 domain protein - - - 0.0000000000000000000000000000000000000000000000003767 192.0
BYD3_k127_8814165_0 COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008163 306.0
BYD3_k127_8814165_1 beta-hydroxylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006451 313.0
BYD3_k127_8814165_2 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002576 312.0
BYD3_k127_8814165_3 Belongs to the type-B carboxylesterase lipase family - - - 0.00000000000000001839 83.0
BYD3_k127_8815353_0 AMP-binding enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001576 491.0
BYD3_k127_8815353_1 TonB dependent receptor - - - 0.00000000000000000000000000000000000008001 145.0
BYD3_k127_8815353_2 Limonene-1,2-epoxide hydrolase catalytic domain K10533 - 3.3.2.8 0.0000000000000000001673 97.0
BYD3_k127_8825798_0 X-Pro dipeptidyl-peptidase (S15 family) K07018 - - 0.0000000000000000000000000000000000000000000000000000000000001542 220.0
BYD3_k127_8825798_1 phospholipid-binding protein K06910 - - 0.0000000000000000000000000000000000000000000000000006612 187.0
BYD3_k127_8825798_2 Belongs to the bacterial histone-like protein family - - - 0.00000000000000000000000000001574 121.0
BYD3_k127_8825798_3 Tellurite resistance protein TerB - - - 0.0000000000000000000000002526 110.0
BYD3_k127_8836544_0 helix_turn_helix, arabinose operon control protein K04033 - - 0.000000000000000000000000000001349 134.0
BYD3_k127_8836544_1 - - - - 0.00000000001947 73.0
BYD3_k127_8838414_0 DNA polymerase type-B family K02336 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002262 461.0
BYD3_k127_8838414_1 SnoaL-like domain K06893 - - 0.000000000000000739 78.0
BYD3_k127_8853274_0 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000000000000000000000000006325 230.0
BYD3_k127_8853274_1 HxlR-like helix-turn-helix - - - 0.0000000000000000000000000000000000000000000007632 168.0
BYD3_k127_8853274_2 Nitronate monooxygenase K00459 - 1.13.12.16 0.000000000000000000000000000000000000002712 149.0
BYD3_k127_8857379_0 histidine kinase A domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007134 348.0
BYD3_k127_8857379_1 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000000000000000000000000000001798 241.0
BYD3_k127_8857379_2 Zn-dependent protease with chaperone - - - 0.00000000000000000000000000000000000000000000000000000000000000000016 248.0
BYD3_k127_8857379_3 Cupin domain - - - 0.0000000000000000000000000000000000000129 149.0
BYD3_k127_8857379_4 DNA-templated transcription, initiation K03088 - - 0.000000000000000005598 92.0
BYD3_k127_8857379_5 Bacterial SH3 domain homologues - - - 0.0000000009958 67.0
BYD3_k127_8861040_0 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001399 285.0
BYD3_k127_8861040_1 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 - 3.1.1.29 0.0000000000000000000000000000000000000000000000000000000000000001863 227.0
BYD3_k127_8861040_2 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000001161 84.0
BYD3_k127_8865321_0 PQQ enzyme repeat K00117 - 1.1.5.2 2.562e-209 669.0
BYD3_k127_8865321_1 Patatin-like phospholipase K07001 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007522 338.0
BYD3_k127_8865321_2 TonB dependent receptor K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000005795 245.0
BYD3_k127_8870466_0 Transposase IS200 like - - - 0.0000000000000000000000000000000000000000000008733 179.0
BYD3_k127_8870466_1 NUDIX hydrolase - - - 0.00000001619 61.0
BYD3_k127_8873113_0 Thioesterase superfamily - - - 0.000000000000000000000000000000000000000005954 159.0
BYD3_k127_8873113_1 Pyridine nucleotide-disulphide oxidoreductase K00384 - 1.8.1.9 0.000000000000000000000000000000006326 128.0
BYD3_k127_8873113_2 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.000000000000000000000009406 113.0
BYD3_k127_8873548_0 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003152 617.0
BYD3_k127_8873548_1 TonB-dependent receptor plug - - - 0.0002798 45.0
BYD3_k127_8898926_0 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000009262 273.0
BYD3_k127_8898926_1 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003159 257.0
BYD3_k127_8898926_2 - - - - 0.000000000000000008673 97.0
BYD3_k127_8898926_3 Beta-lactamase - - - 0.000000000004063 74.0
BYD3_k127_8898926_4 TonB dependent receptor K02014 - - 0.000000004959 64.0
BYD3_k127_8907018_0 Glutathione S-transferase, N-terminal domain K00799 - 2.5.1.18 0.0000000000000000000000000000000000008003 142.0
BYD3_k127_8907018_1 SnoaL-like domain - - - 0.0000000005357 67.0
BYD3_k127_8907018_2 Domain of unknown function (DUF892) - - - 0.00004807 54.0
BYD3_k127_8919889_0 ATP dependent DNA ligase C terminal region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004223 522.0
BYD3_k127_8919889_1 Caspase domain - - - 0.00000000000000000000000000000000000000000000000000000002894 207.0
BYD3_k127_8919889_2 Transcriptional regulatory protein, C terminal - - - 0.0000000000000000000000000000000000000000000001029 187.0
BYD3_k127_8919889_3 - - - - 0.0000000000000000000000000000000000000005537 158.0
BYD3_k127_8919889_4 Shikimate kinase K00851 - 2.7.1.12 0.00000000000000000000000000000000006453 144.0
BYD3_k127_8919889_5 dna ligase - - - 0.0000000000000000000001292 98.0
BYD3_k127_8919889_6 Glutathione-dependent formaldehyde-activating enzyme - - - 0.000000000000000000002913 102.0
BYD3_k127_8926747_0 Nitronate monooxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001127 445.0
BYD3_k127_8926747_1 Thiolase, C-terminal domain K00632 - 2.3.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001545 280.0
BYD3_k127_8926747_2 Belongs to the thiolase family K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000004612 219.0
BYD3_k127_8938645_0 PFAM Major facilitator superfamily K03301 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002571 357.0
BYD3_k127_8938645_1 Peptidase M16 - - - 0.000000000000000000000556 100.0
BYD3_k127_8938645_2 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.0000000000000007892 90.0
BYD3_k127_8939076_0 Single-stranded-DNA-specific exonuclease K07462 GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0004529,GO:0004536,GO:0006139,GO:0006259,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008297,GO:0008409,GO:0009314,GO:0009628,GO:0009987,GO:0010165,GO:0010212,GO:0016787,GO:0016788,GO:0016796,GO:0016895,GO:0033554,GO:0034641,GO:0035312,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0045145,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007198 426.0
BYD3_k127_8939076_1 Protein of unknown function (DUF498/DUF598) - - - 0.0000000000000000000000008669 119.0
BYD3_k127_8939076_2 protein conserved in bacteria - - - 0.00000000000000000005985 103.0
BYD3_k127_8950896_0 Integrin alpha (beta-propellor repeats). - - - 0.0000000000000000000000000000000000000000000002691 185.0
BYD3_k127_8950896_1 Domain of unknown function (DUF1330) - - - 0.00000000000000000000000000000000000000004888 153.0
BYD3_k127_8950896_2 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases K10914 - - 0.000006472 55.0
BYD3_k127_8956289_0 Protein of unknown function (DUF3738) - - - 0.000000000000000000000000000000000000000000000000000000001052 217.0
BYD3_k127_8956289_1 negative regulation of transcription, DNA-templated - - - 0.0000000000000000000000000000000000000000000002476 177.0
BYD3_k127_8956289_2 MotA/TolQ/ExbB proton channel family K03561 - - 0.000000000004832 71.0
BYD3_k127_8960018_0 Peptidase S46 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002321 499.0
BYD3_k127_8964645_0 COG1077 Actin-like ATPase involved in cell morphogenesis K03569 GO:0000003,GO:0000910,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005856,GO:0005886,GO:0007049,GO:0008150,GO:0008360,GO:0009987,GO:0016020,GO:0019954,GO:0022402,GO:0022414,GO:0022603,GO:0022604,GO:0031224,GO:0031226,GO:0032505,GO:0042802,GO:0043093,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0048519,GO:0048523,GO:0050789,GO:0050793,GO:0050794,GO:0051128,GO:0051301,GO:0051302,GO:0051782,GO:0051983,GO:0065007,GO:0065008,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004305 352.0
BYD3_k127_8964645_1 Involved in formation and maintenance of cell shape K03570 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0007163,GO:0008150,GO:0008360,GO:0009987,GO:0016020,GO:0016021,GO:0022603,GO:0022604,GO:0031224,GO:0031226,GO:0043621,GO:0044425,GO:0044459,GO:0044464,GO:0050789,GO:0050793,GO:0050794,GO:0051128,GO:0065007,GO:0065008,GO:0071944,GO:0071963 - 0.00000000000000000000000000000000000000000000000000000000000001339 226.0
BYD3_k127_8964645_2 Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins K03571 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0008150,GO:0008360,GO:0016020,GO:0016021,GO:0022603,GO:0022604,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0050789,GO:0050793,GO:0050794,GO:0051128,GO:0065007,GO:0065008,GO:0071944 - 0.00073 44.0
BYD3_k127_8974397_0 CoA binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000001044 222.0
BYD3_k127_8974397_1 Winged helix-turn helix - - - 0.00000000000000000000000000000000000000000006691 165.0
BYD3_k127_8980117_0 hydrolase family 20, catalytic K12373 - 3.2.1.52 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000239 529.0
BYD3_k127_8980117_1 PTS system, glucose subfamily, IIA K11189 - - 0.00000000000000000000000000000000000000000000000000000000000000000002079 239.0
BYD3_k127_8995574_0 signal transduction histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000008439 210.0
BYD3_k127_8995574_1 Bacterial protein of unknown function (DUF924) - - - 0.000000000000000000000000000000000000000000000003574 181.0
BYD3_k127_8995574_2 Beta-L-arabinofuranosidase, GH127 - - - 0.0000001573 61.0
BYD3_k127_8995574_3 Beta-lactamase - - - 0.000619 50.0
BYD3_k127_9010860_0 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005085 437.0
BYD3_k127_9010860_1 Lipocalin-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001071 399.0
BYD3_k127_9010860_2 Pyridoxamine 5'-phosphate oxidase K07006 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005645 266.0
BYD3_k127_9010860_3 Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions K02553 - - 0.000000000000000000000000000000000000000000000000000000000101 208.0
BYD3_k127_9010860_4 Specific class of high-redox-potential 4Fe-4S ferredoxins. Functions in anaerobic electron transport in most purple and in some other photosynthetic bacteria and in at least one genus (Paracoccus) of halophilic, denitrifying bacteria - - - 0.000000000000000000001235 99.0
BYD3_k127_9012092_0 PFAM Polysaccharide deacetylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006161 322.0
BYD3_k127_9012092_1 negative regulation of protein lipidation K19294 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001192 259.0
BYD3_k127_9012092_2 glycosyl transferase group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000006613 246.0
BYD3_k127_9012768_0 COG1071 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit K11381 - 1.2.4.4 0.0 1006.0
BYD3_k127_9012768_1 PFAM SMP-30 Gluconolaconase LRE domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003955 320.0
BYD3_k127_9012768_10 Sodium/calcium exchanger protein K07301 - - 0.000000000000000000000000000000000000000000000000000000000001162 212.0
BYD3_k127_9012768_11 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000001219 222.0
BYD3_k127_9012768_2 Organic Anion Transporter Polypeptide (OATP) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001514 323.0
BYD3_k127_9012768_3 Oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003882 293.0
BYD3_k127_9012768_4 Transglycosylase SLT domain K08305 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001686 287.0
BYD3_k127_9012768_5 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001876 286.0
BYD3_k127_9012768_6 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006828 266.0
BYD3_k127_9012768_7 GntR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000456 248.0
BYD3_k127_9012768_8 Shikimate dehydrogenase substrate binding domain K00014 - 1.1.1.25 0.00000000000000000000000000000000000000000000000000000000000004237 223.0
BYD3_k127_9012768_9 Beta-galactosidase K12308 - 3.2.1.23 0.0000000000000000000000000000000000000000000000000000000000004161 215.0
BYD3_k127_9029690_0 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000001255 214.0
BYD3_k127_9029690_1 Protein kinase domain K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000003099 149.0
BYD3_k127_9029690_2 - - - - 0.000004765 50.0
BYD3_k127_9032114_0 Belongs to the thiolase family K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003697 271.0
BYD3_k127_9032114_1 Phosphopantetheine attachment site - - - 0.000000000000000000000000000000000000000000000009549 181.0
BYD3_k127_9032114_2 TIGRFAM Tyrosine recombinase XerD K04763 - - 0.0000000000000000000000000000000001761 137.0
BYD3_k127_9035977_0 tRNA-splicing ligase RtcB K14415 - 6.5.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008529 523.0
BYD3_k127_9035977_1 belongs to the aldehyde dehydrogenase family K00154 - 1.2.1.68 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005567 516.0
BYD3_k127_9035977_10 MFS/sugar transport protein K03292 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000008181 267.0
BYD3_k127_9035977_11 PFAM Cold-shock protein, DNA-binding - - - 0.00000000000000000000000000000000000000000000000001723 186.0
BYD3_k127_9035977_12 - - - - 0.00000000000000000000000000000000009846 140.0
BYD3_k127_9035977_13 COG0575 CDP-diglyceride synthetase - - - 0.0000000000000000000000000002226 120.0
BYD3_k127_9035977_14 DNA polymerase K02347 - - 0.000000005438 59.0
BYD3_k127_9035977_15 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.0000005975 53.0
BYD3_k127_9035977_2 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K06978 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004039 478.0
BYD3_k127_9035977_3 Receptor K02014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002465 432.0
BYD3_k127_9035977_4 Alpha beta hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003098 336.0
BYD3_k127_9035977_5 KR domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001531 308.0
BYD3_k127_9035977_6 Phytanoyl-CoA dioxygenase (PhyH) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001745 294.0
BYD3_k127_9035977_7 PFAM SMP-30 Gluconolaconase LRE domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004096 286.0
BYD3_k127_9035977_8 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00627 - 2.3.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004346 271.0
BYD3_k127_9035977_9 PFAM short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000001601 261.0
BYD3_k127_904081_0 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005858 508.0
BYD3_k127_904081_1 Glutaryl-7-ACA acylase K06978 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004773 331.0
BYD3_k127_9041645_0 Papain family cysteine protease - - - 7.982e-204 657.0
BYD3_k127_9041645_1 succinyl-diaminopimelate desuccinylase activity K01295 - 3.4.17.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002251 486.0
BYD3_k127_9041645_2 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002211 271.0
BYD3_k127_9041645_3 Protein of unknown function (DUF1501) - - - 0.0000000000000000000000000000000003457 133.0
BYD3_k127_9050733_0 Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain - - - 0.0000000000000000000000000000000000000000000002909 175.0
BYD3_k127_9050733_1 DJ-1/PfpI family - - - 0.000000000000000000000000000000000000000006778 162.0
BYD3_k127_9063028_0 FAD dependent oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002779 435.0
BYD3_k127_9063028_1 Proline racemase K12658 - 5.1.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005505 405.0
BYD3_k127_9063028_10 Belongs to the sigma-70 factor family. ECF subfamily - - - 0.00000000000002784 81.0
BYD3_k127_9063028_11 Belongs to the sigma-70 factor family. ECF subfamily - - - 0.0000000000001394 79.0
BYD3_k127_9063028_12 AAA ATPase domain - - - 0.00007341 54.0
BYD3_k127_9063028_2 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714,K21062 - 3.5.4.22,4.3.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001207 380.0
BYD3_k127_9063028_3 Sulfite exporter TauE/SafE - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000991 322.0
BYD3_k127_9063028_4 FecR protein K07165 - - 0.00000000000000000000000000000000000001587 158.0
BYD3_k127_9063028_5 FecR protein K07165 - - 0.0000000000000000000000000000000000008487 153.0
BYD3_k127_9063028_6 Transcriptional regulator - - - 0.00000000000000000000000000000001677 138.0
BYD3_k127_9063028_7 FecR protein K07165 - - 0.00000000000000000000000000002266 131.0
BYD3_k127_9063028_8 NADPH quinone - - - 0.00000000000000000000000001936 110.0
BYD3_k127_9063028_9 Bacterial regulatory proteins, gntR family - - - 0.0000000000000007994 87.0
BYD3_k127_9074909_0 Transmembrane secretion effector - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002277 573.0
BYD3_k127_9074909_1 membrane - - - 0.000000000000000000000000000000000000000000000000000004311 197.0
BYD3_k127_9074909_2 Belongs to the AlaDH PNT family K00259 - 1.4.1.1 0.0003641 43.0
BYD3_k127_923616_0 GGDEF domain - - - 0.00000000000000000000000000000000001144 150.0
BYD3_k127_923616_1 ATP-binding region ATPase domain protein - - - 0.000000000000000000001257 108.0
BYD3_k127_923616_2 Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane K03643 GO:0001530,GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0006810,GO:0006869,GO:0008150,GO:0008289,GO:0009279,GO:0009987,GO:0010876,GO:0015920,GO:0016020,GO:0016043,GO:0019867,GO:0022607,GO:0030312,GO:0030313,GO:0031975,GO:0033036,GO:0043163,GO:0043165,GO:0044085,GO:0044091,GO:0044462,GO:0044464,GO:0045229,GO:0051179,GO:0051234,GO:0061024,GO:0071702,GO:0071709,GO:0071840,GO:0071944,GO:0097367,GO:1901264 - 0.000000000000003635 83.0
BYD3_k127_935651_0 Type II secretion system (T2SS), protein F K02455,K12278 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006395 371.0
BYD3_k127_935651_1 Type II secretory pathway, pseudopilin PulG K10924 - - 0.000000000000000001357 95.0
BYD3_k127_935651_2 Prokaryotic N-terminal methylation motif K10926 - - 0.00000000000000006056 88.0
BYD3_k127_936257_0 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 - 4.2.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003667 613.0
BYD3_k127_936257_1 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004132 586.0
BYD3_k127_936257_2 NTP pyrophosphohydrolases including oxidative damage repair enzymes - - - 0.00000000000000000000000000000000000000000000003328 178.0
BYD3_k127_936257_3 Belongs to the Nudix hydrolase family. NudJ subfamily - - - 0.00000000000000000000000000000000000000000000009272 177.0
BYD3_k127_936257_4 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 GO:0002097,GO:0002098,GO:0002143,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0034227,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 2.8.1.13 0.000000000000000003056 86.0
BYD3_k127_938178_0 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02483 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003868 278.0
BYD3_k127_938178_1 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002928 273.0
BYD3_k127_94718_0 PFAM Amidohydrolase 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009638 436.0
BYD3_k127_94718_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000558 277.0
BYD3_k127_94718_2 Cytochrome c - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001474 266.0
BYD3_k127_94718_3 ABC transporter, periplasmic molybdate-binding protein K02020 GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005575,GO:0005623,GO:0006810,GO:0006811,GO:0006820,GO:0008150,GO:0008509,GO:0015075,GO:0015098,GO:0015103,GO:0015318,GO:0015399,GO:0015405,GO:0015412,GO:0015689,GO:0015698,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0030151,GO:0030288,GO:0030313,GO:0030973,GO:0031975,GO:0034220,GO:0042597,GO:0042623,GO:0042626,GO:0043167,GO:0043168,GO:0043169,GO:0043225,GO:0043492,GO:0044464,GO:0046872,GO:0046914,GO:0051179,GO:0051234,GO:0055085,GO:0098656,GO:0099133,GO:1901359 - 0.000000000000000000000000000000000000000000000000000000000000000000004443 250.0
BYD3_k127_94718_4 - - - - 0.0000000000000000000000000001589 121.0
BYD3_k127_94718_5 Bacterial regulatory helix-turn-helix protein, lysR family K02019 - - 0.0000000000000000000000001356 115.0
BYD3_k127_964679_0 ATPases associated with a variety of cellular activities K17324 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001394 389.0
BYD3_k127_964679_1 TOBE domain K17325 - - 0.0000000000000000000000000000000000000000000000000000000613 199.0
BYD3_k127_964679_2 Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family K00111 - 1.1.5.3 0.0001561 44.0
BYD3_k127_97327_0 sulfurtransferase K01011 - 2.8.1.1,2.8.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002333 314.0
BYD3_k127_97327_1 Pyridoxal-dependent decarboxylase, pyridoxal binding domain K01585 - 4.1.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002789 274.0
BYD3_k127_97327_2 Homospermidine synthase K00808 - 2.5.1.44 0.0000000000000000000000000000000000000000000000000008836 185.0
BYD3_k127_97327_3 Glutathione S-transferase, N-terminal domain K00799 - 2.5.1.18 0.00000000000000000000000000000000000000000000000001882 199.0
BYD3_k127_983843_0 Glutathione S-transferase, N-terminal domain K00799 - 2.5.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001802 279.0
BYD3_k127_983843_1 Integrin alpha (beta-propellor repeats). - - - 0.000000000000000000000000000000000000000000000000000000000000000000004306 257.0
BYD3_k127_983843_2 Pyridoxal-phosphate dependent enzyme K01738 - 2.5.1.47 0.00000000000000000000000000000000000000000000000000000008774 198.0
BYD3_k127_985381_0 Belongs to the multicopper oxidase YfiH RL5 family K05810 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007774 282.0
BYD3_k127_985381_1 ZIP Zinc transporter K16267 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005691 286.0
BYD3_k127_986929_0 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001233 409.0
BYD3_k127_986929_1 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000000000000000000000000000002633 200.0
BYD3_k127_986929_2 Predicted metal-dependent hydrolase K07044 - - 0.00000000000000000000000000005513 118.0
BYD3_k127_992902_0 nitronate monooxygenase activity K00459,K02371 - 1.13.12.16,1.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002259 341.0
BYD3_k127_992902_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002415 321.0
BYD3_k127_998467_0 Beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001443 411.0
BYD3_k127_998467_1 Catalyzes the formation of 2-oxobutanoate from L-threonine or the formation of pyruvate from serine K01754 - 4.3.1.19 0.0000000000000000000000000000000000000000000000000000000000000000001493 232.0
BYD3_k127_998467_2 glyoxalase III activity K02005 - - 0.000000000000000000000000000000000000000000000000000000002314 207.0
BYD3_k127_998467_3 Belongs to the aspartate glutamate racemases family - - - 0.00000000000000000000000000000000000000000000000000261 191.0
BYD3_k127_998467_4 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.000000000000000000000000000000000000001575 151.0
BYD3_k127_999236_0 acetolactate synthase K01652 GO:0000287,GO:0003674,GO:0003824,GO:0003984,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006549,GO:0006573,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009097,GO:0009099,GO:0009987,GO:0016053,GO:0016740,GO:0016744,GO:0019752,GO:0019842,GO:0030976,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046872,GO:0048037,GO:0050662,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1901681 2.2.1.6 7.95e-285 888.0
BYD3_k127_999236_1 Thioesterase superfamily - - - 0.00000000000000000000000000000000000000000000000006266 181.0
BYD3_k127_999236_2 COG1629 Outer membrane receptor proteins, mostly Fe transport - - - 0.000000000000000000000000000000000005617 141.0
BYD3_k127_999236_3 ACT domain K01653 GO:0003674,GO:0003824,GO:0003984,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005948,GO:0006082,GO:0006520,GO:0006549,GO:0006573,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009097,GO:0009099,GO:0009987,GO:0016053,GO:0016740,GO:0016744,GO:0019752,GO:0032991,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494,GO:1990234 2.2.1.6 0.00000000000000000000000000000000009584 138.0