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Overview

ID MAG00140
Name BYD3_bin.59
Sample SMP0003
Taxonomy
Kingdom Bacteria
Phylum Gemmatimonadota
Class Gemmatimonadetes
Order Gemmatimonadales
Family GWC2-71-9
Genus CAMLLJ01
Species CAMLLJ01 sp025928955
Assembly information
Completeness (%) 74.72
Contamination (%) 2.47
GC content (%) 70.0
N50 (bp) 18,768
Genome size (bp) 2,816,835

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes2448

Gene name Description KEGG GOs EC E-value Score Sequence
BYD3_k127_1009382_0 TIGRFAM DNA polymerase III, alpha subunit K02337,K14162 - 2.7.7.7 1.282e-297 951.0
BYD3_k127_1009382_1 tRNA synthetases class I (M) K01874 - 6.1.1.10 3.86e-198 630.0
BYD3_k127_1009382_10 nucleotidyltransferase activity - - - 0.000000000000000000005652 106.0
BYD3_k127_1009382_11 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 - - 0.0000000000000000000172 103.0
BYD3_k127_1009382_12 - - - - 0.0000002031 60.0
BYD3_k127_1009382_2 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962 - 2.1.3.15,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001264 440.0
BYD3_k127_1009382_3 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000589 417.0
BYD3_k127_1009382_4 PSP1 C-terminal conserved region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002106 334.0
BYD3_k127_1009382_5 CAAX protease self-immunity K07052 - - 0.0000000000000000000000000000000000000000000000000000148 207.0
BYD3_k127_1009382_6 LemA family K03744 - - 0.000000000000000000000000000000000000000000002968 183.0
BYD3_k127_1009382_7 PFAM peptidase - - - 0.00000000000000000000000000000000000000000001191 173.0
BYD3_k127_1009382_8 TPM domain K06872 - - 0.000000000000000000000000000000000005956 149.0
BYD3_k127_1009382_9 PFAM DSBA oxidoreductase - - - 0.00000000000000000000000000000000001337 147.0
BYD3_k127_1020413_0 Heavy-metal-associated domain K01533,K17686 - 3.6.3.4,3.6.3.54 4.727e-298 932.0
BYD3_k127_1020413_1 LVIVD repeat - - - 1.389e-282 883.0
BYD3_k127_1020413_10 Bacterial transcriptional activator domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002321 472.0
BYD3_k127_1020413_11 Xylose isomerase-like TIM barrel K01151 - 3.1.21.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002975 383.0
BYD3_k127_1020413_12 Catalyzes the sodium-dependent transport of glutamate - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001471 357.0
BYD3_k127_1020413_13 Putative RNA methylase family UPF0020 K07444 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001261 345.0
BYD3_k127_1020413_14 DNA ligase K01971 - 6.5.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002036 345.0
BYD3_k127_1020413_15 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000218 333.0
BYD3_k127_1020413_16 dna ligase K01971 - 6.5.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005848 313.0
BYD3_k127_1020413_17 Beta-lactamase class C and other penicillin binding K01286 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001401 282.0
BYD3_k127_1020413_18 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 GO:0000726,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0005488,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006303,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0033554,GO:0034641,GO:0043085,GO:0043170,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050790,GO:0050896,GO:0051340,GO:0051351,GO:0051716,GO:0065007,GO:0065009,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363 - 0.0000000000000000000000000000000000000000000000000000000000000000000002017 248.0
BYD3_k127_1020413_19 amine dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002169 254.0
BYD3_k127_1020413_2 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 - 3.3.1.1 3.022e-274 852.0
BYD3_k127_1020413_20 Alpha/beta hydrolase family K21209 - - 0.0000000000000000000000000000000000000000000000000000000000000000004733 238.0
BYD3_k127_1020413_21 YCII-related domain - - - 0.0000000000000000000000000000000000000000000000000000000003431 205.0
BYD3_k127_1020413_22 MOSC domain - - - 0.00000000000000000000000000000000000000000000000000007712 195.0
BYD3_k127_1020413_23 Domain of unknown function (DUF892) - - - 0.0000000000000000000000000000000000000000000000000001508 193.0
BYD3_k127_1020413_24 Phosphodiester glycosidase - - - 0.0000000000000000000000000000000000000000000000000006059 201.0
BYD3_k127_1020413_25 Cupredoxin-like domain - - - 0.00000000000000000000000000000000000000000002992 164.0
BYD3_k127_1020413_26 Putative heavy-metal-binding - - - 0.00000000000000000000000000000000000000000006597 162.0
BYD3_k127_1020413_27 Thioesterase K07107 - - 0.0000000000000000000000000000000000000000007695 168.0
BYD3_k127_1020413_28 Sigma-70, region 4 type 2 - - - 0.0000000000000000000000000000000000000022 157.0
BYD3_k127_1020413_29 Histidine kinase K07683 - 2.7.13.3 0.0000000000000000000000000000000000003035 150.0
BYD3_k127_1020413_3 Glutamine synthetase type III K01915 - 6.3.1.2 1.638e-265 837.0
BYD3_k127_1020413_30 Metal-sensitive transcriptional repressor K21600 - - 0.000000000000000000000000000000003408 133.0
BYD3_k127_1020413_31 Putative lumazine-binding - - - 0.00000000000000000000000000000001057 134.0
BYD3_k127_1020413_32 PFAM YCII-related - - - 0.0000000000000000000000000002815 120.0
BYD3_k127_1020413_33 Photosynthetic reaction centre cytochrome C subunit - - - 0.000000000000000000000000004632 117.0
BYD3_k127_1020413_34 Protein of unknown function (DUF983) - - - 0.00000000000000000000002816 105.0
BYD3_k127_1020413_35 response regulator receiver - - - 0.00000000000000002816 86.0
BYD3_k127_1020413_36 - - - - 0.00000000000001055 76.0
BYD3_k127_1020413_37 - - - - 0.000000003471 62.0
BYD3_k127_1020413_4 PFAM peptidase S9A prolyl oligopeptidase domain protein beta-propeller K01354 - 3.4.21.83 1.848e-206 669.0
BYD3_k127_1020413_5 M61 glycyl aminopeptidase - - - 3.535e-205 655.0
BYD3_k127_1020413_6 Belongs to the sigma-70 factor family. ECF subfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001051 563.0
BYD3_k127_1020413_7 Peptidase family M1 domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002011 581.0
BYD3_k127_1020413_8 glutamate decarboxylase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001147 549.0
BYD3_k127_1020413_9 tail specific protease K03797 - 3.4.21.102 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001108 467.0
BYD3_k127_1062509_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 2.033e-283 892.0
BYD3_k127_1062509_1 Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs K04094 - 2.1.1.74 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002273 597.0
BYD3_k127_1062509_10 Phage integrase, N-terminal SAM-like domain K03733 - - 0.000000000000000000000000000002953 125.0
BYD3_k127_1062509_11 Prokaryotic N-terminal methylation motif - - - 0.0000000000000000000000006239 109.0
BYD3_k127_1062509_12 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 - 2.7.1.71 0.00000000000000000000002165 107.0
BYD3_k127_1062509_13 Prokaryotic N-terminal methylation motif - - - 0.0000000000000000000001899 104.0
BYD3_k127_1062509_14 - - - - 0.0000000000000002139 92.0
BYD3_k127_1062509_15 Pilus assembly protein, PilO K02664 - - 0.00000000000002437 81.0
BYD3_k127_1062509_16 - - - - 0.0000000000006545 78.0
BYD3_k127_1062509_17 - K02671 - - 0.00003236 55.0
BYD3_k127_1062509_2 Bacterial regulatory protein, Fis family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001058 516.0
BYD3_k127_1062509_3 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005075 497.0
BYD3_k127_1062509_4 Type IV pilus assembly protein PilM; K02662 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002519 447.0
BYD3_k127_1062509_5 AMIN domain K02666 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003668 452.0
BYD3_k127_1062509_6 two component, sigma54 specific, transcriptional regulator, Fis family K07714 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002274 433.0
BYD3_k127_1062509_7 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000003124 206.0
BYD3_k127_1062509_8 - - - - 0.000000000000000000000000000000000000002237 164.0
BYD3_k127_1062509_9 Fimbrial assembly protein (PilN) - - - 0.000000000000000000000000000000000001548 147.0
BYD3_k127_1063176_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003126 285.0
BYD3_k127_1063176_1 Protein of unknown function (DUF2867) - - - 0.000002998 49.0
BYD3_k127_1066910_0 diguanylate cyclase - - - 0.0000000000000000000000000000002055 137.0
BYD3_k127_1066910_1 - - - - 0.00000000000000000000000000000128 132.0
BYD3_k127_1137464_0 PFAM acetyl-CoA hydrolase transferase K01067 - 3.1.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003727 607.0
BYD3_k127_1137464_1 TonB dependent receptor K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005036 509.0
BYD3_k127_1137464_2 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009962 422.0
BYD3_k127_1137464_3 Pfam Ion transport protein K10716 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000616 316.0
BYD3_k127_1137464_4 PFAM ATP-binding region, ATPase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000001787 228.0
BYD3_k127_1137464_5 Belongs to the short-chain dehydrogenases reductases (SDR) family K00059 - 1.1.1.100 0.0000000000000000000000000000000000000005272 153.0
BYD3_k127_1137464_6 COG1512 Beta-propeller domains of methanol dehydrogenase type K06872 - - 0.000000000000000000000000000000000006531 150.0
BYD3_k127_1177601_0 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002195 635.0
BYD3_k127_1177601_1 response regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004657 592.0
BYD3_k127_1177601_2 MacB-like periplasmic core domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001666 607.0
BYD3_k127_1177601_3 MacB-like periplasmic core domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005196 567.0
BYD3_k127_1177601_4 PAS domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005454 452.0
BYD3_k127_1177601_5 Barrel-sandwich domain of CusB or HlyD membrane-fusion - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007351 399.0
BYD3_k127_1177601_6 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005516 369.0
BYD3_k127_1177601_7 lipoprotein transporter activity K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005598 330.0
BYD3_k127_1177601_8 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001882 278.0
BYD3_k127_1177601_9 COG0577 ABC-type antimicrobial peptide transport system permease component - - - 0.00000004781 54.0
BYD3_k127_1198588_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1395.0
BYD3_k127_1198588_1 Dipeptidyl peptidase IV (DPP IV) N-terminal region K01278 - 3.4.14.5 1.539e-266 847.0
BYD3_k127_1198588_10 PFAM transglutaminase domain protein - - - 0.00000003322 66.0
BYD3_k127_1198588_11 - - - - 0.0002703 51.0
BYD3_k127_1198588_2 DALR_2 K01883 - 6.1.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002287 481.0
BYD3_k127_1198588_3 Domain of unknown function (DUF1611_N) Rossmann-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001868 397.0
BYD3_k127_1198588_4 PspA/IM30 family K03969 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000639 282.0
BYD3_k127_1198588_5 mechanosensitive ion channel K22044 - - 0.00000000000000000000000000000000000000000000000000000000000000003299 234.0
BYD3_k127_1198588_6 - - - - 0.00000000000000000000000000000005248 133.0
BYD3_k127_1198588_7 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.00000000000005462 83.0
BYD3_k127_1198588_8 Elongation factor K02358 - - 0.0000000000003999 71.0
BYD3_k127_1221512_0 glyoxalase bleomycin resistance protein dioxygenase K04750 - - 0.000000000000000000000000000000000000000000000000000000008486 203.0
BYD3_k127_1221512_1 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000000000001734 188.0
BYD3_k127_1221512_2 helix_turn_helix, arabinose operon control protein - - - 0.000000000000000000000002189 116.0
BYD3_k127_1221512_3 - - - - 0.000000000000000000000012 107.0
BYD3_k127_1301758_0 ABC transporter transmembrane region K11085 - - 6.975e-239 754.0
BYD3_k127_1301758_1 cAMP biosynthetic process K08282,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008274 572.0
BYD3_k127_1301758_10 protein kinase activity - - - 0.0000000000000000000000009095 108.0
BYD3_k127_1301758_11 Smr protein MutS2 - - - 0.00006128 51.0
BYD3_k127_1301758_2 PFAM sulfatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006192 531.0
BYD3_k127_1301758_3 Protein kinase domain K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002041 478.0
BYD3_k127_1301758_4 protein kinase activity K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001738 443.0
BYD3_k127_1301758_5 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003469 309.0
BYD3_k127_1301758_6 Histidine kinase K08082 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003186 283.0
BYD3_k127_1301758_7 LytTr DNA-binding domain K02477 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003877 265.0
BYD3_k127_1301758_8 Domain of unknown function (DUF4153) - - - 0.0000000000000000000000000000000000000000000000000000000000000001832 250.0
BYD3_k127_1301758_9 oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor - - - 0.000000000000000000000000000000000000000000000000000006984 205.0
BYD3_k127_1304427_0 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity K07456 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003592 496.0
BYD3_k127_1304427_1 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005564 436.0
BYD3_k127_1304427_2 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005876 314.0
BYD3_k127_1304427_3 Met-10+ like-protein K02687 - - 0.00000000000000000000000000000000000000000000005816 185.0
BYD3_k127_1304427_4 HIT domain K02503 - - 0.000000000000000000000000000000000000002311 151.0
BYD3_k127_1304427_5 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.00000000000000000009103 100.0
BYD3_k127_1304427_6 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.000000000000172 70.0
BYD3_k127_1310133_0 lysine biosynthetic process via aminoadipic acid - - - 0.00000000000000000000000000000000003043 143.0
BYD3_k127_1310133_1 NLP P60 protein K21471 - - 0.000000000000000000000008512 113.0
BYD3_k127_1312723_0 TonB dependent receptor - - - 2.415e-259 824.0
BYD3_k127_1312723_1 Sodium:solute symporter family K14392 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000334 620.0
BYD3_k127_1312723_10 alpha/beta hydrolase fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001444 311.0
BYD3_k127_1312723_11 Protein of unknown function DUF72 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001265 298.0
BYD3_k127_1312723_12 PFAM secretion protein HlyD family protein K01993,K02005 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003614 308.0
BYD3_k127_1312723_13 transcriptional regulator K09017 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001345 256.0
BYD3_k127_1312723_14 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004183 273.0
BYD3_k127_1312723_15 Serine aminopeptidase, S33 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000009003 254.0
BYD3_k127_1312723_16 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000009198 220.0
BYD3_k127_1312723_17 oxidoreductase activity K00274 - 1.4.3.4 0.000000000000000000000000000000000000000000000000000000000002276 227.0
BYD3_k127_1312723_18 - - - - 0.0000000000000000000000000000000000000000000000000000004029 201.0
BYD3_k127_1312723_19 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K04750 - - 0.00000000000000000000000000000000000000000000000000002784 195.0
BYD3_k127_1312723_2 PFAM AMP-dependent synthetase and ligase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005459 616.0
BYD3_k127_1312723_20 Esterase PHB depolymerase - - - 0.00000000000000000000000000000000000000000000000001909 205.0
BYD3_k127_1312723_21 - - - - 0.000000000000000000000000000000000000000000000001879 187.0
BYD3_k127_1312723_22 bis(5'-adenosyl)-triphosphatase activity - - - 0.000000000000000000000000000000000000000000007736 181.0
BYD3_k127_1312723_23 phosphatase - - - 0.00000000000000000000000000000000000004177 149.0
BYD3_k127_1312723_24 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 - - 0.0000000000000000000000000761 111.0
BYD3_k127_1312723_25 - - - - 0.0000000000000000000001921 103.0
BYD3_k127_1312723_26 phosphorelay signal transduction system - - - 0.00000000000000008629 85.0
BYD3_k127_1312723_27 - - - - 0.000000000000239 75.0
BYD3_k127_1312723_28 Evidence 4 Homologs of previously reported genes of - - - 0.00000000005553 64.0
BYD3_k127_1312723_29 Acetyltransferase (GNAT) domain - - - 0.000000001617 61.0
BYD3_k127_1312723_3 helix_turn _helix lactose operon repressor K02529 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001283 417.0
BYD3_k127_1312723_30 - - - - 0.000000005943 63.0
BYD3_k127_1312723_31 Adenylate cyclase K01768 - 4.6.1.1 0.0000002517 63.0
BYD3_k127_1312723_32 Domain of unknown function (DUF4397) - - - 0.00004859 54.0
BYD3_k127_1312723_4 short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002328 417.0
BYD3_k127_1312723_5 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009881 416.0
BYD3_k127_1312723_6 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003341 400.0
BYD3_k127_1312723_7 AAA domain, putative AbiEii toxin, Type IV TA system K01990,K13926 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000694 391.0
BYD3_k127_1312723_8 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007489 347.0
BYD3_k127_1312723_9 dioxygenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002177 341.0
BYD3_k127_1353872_0 Belongs to the aldehyde dehydrogenase family K00128 - 1.2.1.3 3.854e-231 739.0
BYD3_k127_1353872_1 deoxyribose-phosphate aldolase activity K01619 - 4.1.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005242 488.0
BYD3_k127_1353872_2 Oxidoreductase family, C-terminal alpha/beta domain K00118,K13020 - 1.1.1.335,1.1.99.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004061 460.0
BYD3_k127_1353872_3 PFAM O-methyltransferase K00588 - 2.1.1.104 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006443 321.0
BYD3_k127_1353872_4 Rhomboid family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003121 271.0
BYD3_k127_1353872_5 Serine hydrolase (FSH1) - - - 0.00000000000000000000000000000000000000000000000000000002144 203.0
BYD3_k127_1353872_6 - - - - 0.000000000000000000000000000000000000007525 152.0
BYD3_k127_1353872_7 - - - - 0.00000000000005165 74.0
BYD3_k127_1418340_0 homoserine transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000000001367 205.0
BYD3_k127_1418340_1 Domain of unknown function (DUF4279) - - - 0.00000000009342 69.0
BYD3_k127_1462174_0 Bacterial regulatory protein, Fis family K07714 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005499 362.0
BYD3_k127_1462174_1 Protein kinase domain - - - 0.0000000000000000000000000000000000000000002157 164.0
BYD3_k127_1462174_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K07710 - 2.7.13.3 0.00000000000000000000000000000000007182 146.0
BYD3_k127_1462174_3 Acetyltransferase (GNAT) family - - - 0.00000000000000000001106 95.0
BYD3_k127_1482482_0 NADH:flavin oxidoreductase / NADH oxidase family K09461 - 1.14.13.40 0.0 1051.0
BYD3_k127_1482482_1 AMP-binding enzyme C-terminal domain K08295 - 6.2.1.32 7.114e-236 748.0
BYD3_k127_1482482_10 Branched-chain amino acid transport system / permease component K02057 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006778 320.0
BYD3_k127_1482482_11 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain K00074 - 1.1.1.157 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003295 289.0
BYD3_k127_1482482_12 Phosphate acyltransferases K00655 - 2.3.1.51 0.000000000000000000000000000000000000000000000000000000000000000000000000000000065 274.0
BYD3_k127_1482482_13 Belongs to the peptidase S51 family K05995 - 3.4.13.21 0.000000000000000000000000000000000000000000000000000000000000000000000005998 250.0
BYD3_k127_1482482_14 KR domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002036 268.0
BYD3_k127_1482482_15 Amidohydrolase K03392,K22213 - 4.1.1.45,4.1.1.52 0.000000000000000000000000000000000000000000000000000000000000000000003968 244.0
BYD3_k127_1482482_16 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000002202 254.0
BYD3_k127_1482482_17 Lysophospholipase L1 and related esterases - - - 0.000000000000000000000000000000000000000000000000000000000000003337 235.0
BYD3_k127_1482482_18 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000000000000000000002645 218.0
BYD3_k127_1482482_19 Protein of unknown function, DUF488 - - - 0.00000000000000000000000000000000000000000000000000000000001961 211.0
BYD3_k127_1482482_2 tRNA-splicing ligase RtcB K14415 - 6.5.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008845 605.0
BYD3_k127_1482482_20 Endonuclease/Exonuclease/phosphatase family - - - 0.0000000000000000000000000000000000000000000000000000000005006 219.0
BYD3_k127_1482482_21 dioxygenase of extradiol dioxygenase family K06991 - - 0.00000000000000000000000000000000000000000000000853 179.0
BYD3_k127_1482482_22 Endoribonuclease L-PSP K09022 - 3.5.99.10 0.000000000000000000000000000000000000000008661 160.0
BYD3_k127_1482482_23 pathogenesis K07507 - - 0.0000000000000000000000000000000000000005926 154.0
BYD3_k127_1482482_24 Sulfatase-modifying factor enzyme 1 - - - 0.000000000000000000000000000000000002622 149.0
BYD3_k127_1482482_25 Domain of unknown function (DUF4112) - - - 0.0000000000000000000000000000000005625 136.0
BYD3_k127_1482482_26 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000006434 138.0
BYD3_k127_1482482_27 Fe-S protein K18979 - 1.17.99.6 0.000000000000000000000006445 104.0
BYD3_k127_1482482_28 Glyoxalase-like domain - - - 0.0000000000000000003898 98.0
BYD3_k127_1482482_3 Acyl-CoA dehydrogenase, C-terminal domain K00249 - 1.3.8.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002488 489.0
BYD3_k127_1482482_4 Belongs to the thiolase family K00626 - 2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001457 451.0
BYD3_k127_1482482_5 Threonine aldolase K01620 - 4.1.2.48 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002102 434.0
BYD3_k127_1482482_6 Enoyl-CoA hydratase/isomerase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001092 375.0
BYD3_k127_1482482_7 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity K00303 - 1.5.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002957 379.0
BYD3_k127_1482482_8 permease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001118 317.0
BYD3_k127_1482482_9 Branched-chain amino acid transport system / permease component K02057 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007426 314.0
BYD3_k127_1501433_0 Response regulator receiver domain - - - 0.0 1970.0
BYD3_k127_1501433_1 major pilin protein fima - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006205 377.0
BYD3_k127_1501433_2 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001735 299.0
BYD3_k127_1501433_3 Transcriptional regulator - - - 0.000000000000000000000000001218 121.0
BYD3_k127_1501433_4 - - - - 0.0000000000000000003047 92.0
BYD3_k127_1501433_5 - - - - 0.0000000000000007543 83.0
BYD3_k127_1501433_6 - - - - 0.00000001424 59.0
BYD3_k127_150858_0 TonB-dependent receptor K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001458 487.0
BYD3_k127_150858_1 Helix-hairpin-helix motif K14162 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002328 467.0
BYD3_k127_150858_2 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009262 405.0
BYD3_k127_150858_3 Amidohydrolase family K06015 - 3.5.1.81 0.00000000000000000000000000000000000000000000000000000000000000000000000001511 255.0
BYD3_k127_150858_4 Domain of unknown function (DUF4154) - - - 0.00000000000000000000000000000000001076 145.0
BYD3_k127_150858_5 Putative Actinobacterial Holin-X, holin superfamily III - - - 0.0000000000000000001622 98.0
BYD3_k127_1536299_0 2-oxoglutarate dehydrogenase C-terminal K00164 - 1.2.4.2 0.0 1300.0
BYD3_k127_1536299_1 Pyrrolo-quinoline quinone K00114 - 1.1.2.8 4.606e-271 847.0
BYD3_k127_1536299_10 Lactonase, 7-bladed beta-propeller - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000203 330.0
BYD3_k127_1536299_11 tRNA synthetases class I (E and Q), catalytic domain K01894 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000792 327.0
BYD3_k127_1536299_12 deoxyhypusine monooxygenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001301 339.0
BYD3_k127_1536299_13 chloride channel K03281 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002068 330.0
BYD3_k127_1536299_14 PA14 domain K05349 - 3.2.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002936 299.0
BYD3_k127_1536299_15 PFAM blue (type 1) copper domain protein K00368,K02638 - 1.7.2.1 0.0000000000000000000000000000000000000000000000000000000000006022 225.0
BYD3_k127_1536299_16 4 iron, 4 sulfur cluster binding - - - 0.000000000000000000000000000000000000000001806 161.0
BYD3_k127_1536299_17 Transcriptional regulator K07506 - - 0.00000000000000000000000000000000000000003893 163.0
BYD3_k127_1536299_18 negative regulation of transcription, DNA-templated - - - 0.0000000000000000000000000000000000001455 149.0
BYD3_k127_1536299_19 deoxyhypusine monooxygenase activity - - - 0.0000000000000000000000000000000000008358 157.0
BYD3_k127_1536299_2 Transketolase, thiamine diphosphate binding domain K00615 - 2.2.1.1 4.181e-254 801.0
BYD3_k127_1536299_20 Alpha-tubulin suppressor and related RCC1 domain-containing proteins - - - 0.0000000000000000000000000000000006115 147.0
BYD3_k127_1536299_21 endonuclease activity - - - 0.00000000000000000000000000000001244 132.0
BYD3_k127_1536299_22 MerR family transcriptional regulator K22491 - - 0.000000000000000000000000000001431 132.0
BYD3_k127_1536299_23 Alpha-tubulin suppressor and related RCC1 domain-containing proteins - - - 0.000000000000000000000000004651 127.0
BYD3_k127_1536299_24 Methyltransferase type 11 - - - 0.0000000000000000000006066 102.0
BYD3_k127_1536299_25 Leishmanolysin - - - 0.000000000000001688 91.0
BYD3_k127_1536299_26 Glucose / Sorbosone dehydrogenase - - - 0.000000000004976 78.0
BYD3_k127_1536299_27 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase K02564 - 3.5.99.6 0.000000004107 57.0
BYD3_k127_1536299_28 Copper binding proteins, plastocyanin/azurin family - - - 0.000003998 60.0
BYD3_k127_1536299_3 Belongs to the enoyl-CoA hydratase isomerase family K01782 - 1.1.1.35,4.2.1.17,5.1.2.3 2.245e-211 681.0
BYD3_k127_1536299_4 Thiolase, C-terminal domain K00632 - 2.3.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004337 544.0
BYD3_k127_1536299_5 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002177 543.0
BYD3_k127_1536299_6 C-terminal domain of alpha-glycerophosphate oxidase K00111 - 1.1.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000143 479.0
BYD3_k127_1536299_7 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family K03309 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001257 397.0
BYD3_k127_1536299_8 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K13810 - 2.2.1.2,5.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000227 376.0
BYD3_k127_1536299_9 PFAM extracellular solute-binding protein, family 3 K16254 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009626 335.0
BYD3_k127_1579655_0 Carbohydrate family 9 binding domain-like - - - 1.574e-302 954.0
BYD3_k127_1579655_1 LVIVD repeat - - - 7.509e-270 858.0
BYD3_k127_1579655_10 Methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001511 277.0
BYD3_k127_1579655_11 Phosphatidylethanolamine-binding protein K06910 - - 0.0000000000000000000000000000000000000000000000000000000000000000000003609 240.0
BYD3_k127_1579655_12 Cytochrome c K00376,K02305,K17760 - 1.1.9.1,1.7.2.4 0.000000000000000000000000000000000000000000000000000000000000002063 226.0
BYD3_k127_1579655_13 Domain of unknown function (DUF305) - - - 0.00000000000000000000000000000000000000000000000000000001026 205.0
BYD3_k127_1579655_14 Ribose 5-phosphate isomerase K01808 - 5.3.1.6 0.000000000000000000000000000000000000000000000000001235 187.0
BYD3_k127_1579655_15 - - - - 0.000000000000000000000000000000000000000000003579 177.0
BYD3_k127_1579655_16 DinB family - - - 0.0000000000000000000000000000000000005005 146.0
BYD3_k127_1579655_17 NmrA-like family K19267 - 1.6.5.2 0.000000000000000000000000000000000001304 150.0
BYD3_k127_1579655_2 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - - 1.43e-237 746.0
BYD3_k127_1579655_3 RecQ zinc-binding K03654 - 3.6.4.12 2.813e-215 681.0
BYD3_k127_1579655_4 Belongs to the Glu Leu Phe Val dehydrogenases family K00261 - 1.4.1.3 1.039e-199 636.0
BYD3_k127_1579655_5 trisaccharide binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005085 501.0
BYD3_k127_1579655_6 Aldo/keto reductase family K19265 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003764 399.0
BYD3_k127_1579655_7 PFAM multicopper oxidase type K08100 - 1.3.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007676 364.0
BYD3_k127_1579655_8 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002397 353.0
BYD3_k127_1579655_9 Leishmanolysin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001974 305.0
BYD3_k127_1641171_0 Pyridoxal-phosphate dependent enzyme K12339,K21148 - 2.5.1.113,2.5.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002059 281.0
BYD3_k127_1641171_1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000000000000000003241 125.0
BYD3_k127_1649734_0 AMP-dependent synthetase and ligase K01897 - 6.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002061 370.0
BYD3_k127_1649734_1 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 0.0000000000000000000000000000000000000001043 158.0
BYD3_k127_1649766_0 Cupredoxin-like domain K00376 - 1.7.2.4 1.953e-263 833.0
BYD3_k127_1649766_1 luxR family - - - 0.00000000000000000000000000000000000000000000000004489 189.0
BYD3_k127_1649766_2 PFAM blue (type 1) copper domain protein K00368 GO:0005575,GO:0005623,GO:0042597,GO:0044464 1.7.2.1 0.00000000000000000000000000000000000001896 149.0
BYD3_k127_1649766_4 lipoprotein involved in nitrous oxide reduction K19342 - - 0.0000000000000000000000000000001984 143.0
BYD3_k127_1663623_0 Belongs to the formate--tetrahydrofolate ligase family K01938 - 6.3.4.3 4.113e-220 700.0
BYD3_k127_1663623_1 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007453 374.0
BYD3_k127_1663623_2 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.00000000000000000000000000000000000000000000000000000000000001374 227.0
BYD3_k127_1663623_3 Hydrolase, TatD family K03424 - - 0.00000000000000000000000000000000000000000000000000000000008675 215.0
BYD3_k127_1663623_4 endoribonuclease L-PSP K09022 - 3.5.99.10 0.0000000000000000000000000000000000000008231 152.0
BYD3_k127_1667169_0 SMART von Willebrand factor, type A K07161 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000718 302.0
BYD3_k127_1667169_1 XdhC and CoxI family K07402 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007163 278.0
BYD3_k127_1667169_2 AAA domain (dynein-related subfamily) - - - 0.000000000000000000000000000000000000000000000003612 175.0
BYD3_k127_1667169_3 glyoxalase III activity - - - 0.0004646 47.0
BYD3_k127_1675751_0 nucleotide catabolic process K01081,K11751,K17224 - 3.1.3.5,3.6.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000252 457.0
BYD3_k127_1675751_1 Protein kinase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004543 289.0
BYD3_k127_1675751_2 GGDEF domain - - - 0.0000000000000000000000000000000000005866 156.0
BYD3_k127_1675751_3 HD domain - - - 0.00000000000000000000000002365 117.0
BYD3_k127_1675751_4 Putative stress-induced transcription regulator - - - 0.000000000001135 75.0
BYD3_k127_1701908_0 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY K03106 - 3.6.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009255 581.0
BYD3_k127_1701908_1 Belongs to the RNA methyltransferase TrmD family K00554 - 2.1.1.228 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005282 274.0
BYD3_k127_1701908_2 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 GO:0008150,GO:0040007 - 0.00000000000000000000000001123 117.0
BYD3_k127_1701908_3 Ribosomal protein S16 K02959 - - 0.000000000000000000000002838 104.0
BYD3_k127_1747187_0 AlkA N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006812 607.0
BYD3_k127_1747187_1 Periplasmic component of the Tol biopolymer transport system - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002013 329.0
BYD3_k127_1747187_2 Calcineurin-like phosphoesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001418 305.0
BYD3_k127_1747187_3 Predicted membrane protein (DUF2254) - - - 0.0000000000000000000000000000000000000000000000000000000002266 212.0
BYD3_k127_1747187_4 Metal binding domain of Ada K10778 - 2.1.1.63 0.000000000000000000000000000000000000000000000000218 182.0
BYD3_k127_1747187_5 HNH endonuclease - - - 0.000000000000004752 85.0
BYD3_k127_1747187_6 Catalyzes the sodium-dependent transport of glutamate K03312 - - 0.0000001694 56.0
BYD3_k127_1765741_0 Protein of unknown function (DUF445) - - - 0.0000000000000000000000000000000001507 150.0
BYD3_k127_1777244_0 An AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism K01961 - 6.3.4.14,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001152 599.0
BYD3_k127_1777244_1 Type II/IV secretion system protein K02669 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001083 507.0
BYD3_k127_1777244_2 2-phosphosulpholactate phosphatase K05979 - 3.1.3.71 0.00000000000000000000000000000000000003071 164.0
BYD3_k127_1777244_3 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.00000000000000000000000000003678 117.0
BYD3_k127_1782661_0 Methylmalonyl-CoA mutase K01848 - 5.4.99.2 7.426e-215 683.0
BYD3_k127_1782661_1 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005622 595.0
BYD3_k127_1782661_10 Competence protein K02238 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001062 308.0
BYD3_k127_1782661_11 Lumazine binding domain K00793 - 2.5.1.9 0.0000000000000000000000000000000000000000000002426 180.0
BYD3_k127_1782661_12 6,7-dimethyl-8-ribityllumazine synthase K00794 GO:0000906,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.78 0.00000000000000000000000000000000000000741 157.0
BYD3_k127_1782661_13 PTS system sorbose subfamily IIB component K19507 - - 0.000000000000000000000000000000000003179 147.0
BYD3_k127_1782661_14 PD-(D/E)XK nuclease superfamily - - - 0.0000000000000000000000000000001436 128.0
BYD3_k127_1782661_15 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.00000000000000000000001855 108.0
BYD3_k127_1782661_16 Regulatory protein, FmdB family - - - 0.000000000000000001859 93.0
BYD3_k127_1782661_17 PTS system fructose IIA component K02744 - - 0.00000000000000009543 85.0
BYD3_k127_1782661_18 - - - - 0.000000000006294 72.0
BYD3_k127_1782661_19 Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase K05808 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006417,GO:0006448,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0015935,GO:0017148,GO:0019222,GO:0022626,GO:0022627,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032991,GO:0034248,GO:0034249,GO:0043021,GO:0043022,GO:0043024,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0044877,GO:0045900,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0080090,GO:1990904,GO:2000112,GO:2000113 - 0.000004604 59.0
BYD3_k127_1782661_2 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001455 537.0
BYD3_k127_1782661_20 - - - - 0.000007015 52.0
BYD3_k127_1782661_21 - - - - 0.00000918 54.0
BYD3_k127_1782661_22 Late competence development protein ComFB - - - 0.00001137 57.0
BYD3_k127_1782661_3 Arginyl-tRNA synthetase K01887 GO:0003674,GO:0003824,GO:0004812,GO:0004814,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006420,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000514 508.0
BYD3_k127_1782661_4 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001661 436.0
BYD3_k127_1782661_5 Fructose-1-6-bisphosphatase, N-terminal domain K03841 - 3.1.3.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009397 412.0
BYD3_k127_1782661_6 Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr) K06023 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001459 382.0
BYD3_k127_1782661_7 pfkB family carbohydrate kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003411 375.0
BYD3_k127_1782661_8 AIR synthase related protein, C-terminal domain K01933 - 6.3.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003773 343.0
BYD3_k127_1782661_9 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001828 317.0
BYD3_k127_1804100_0 Glutamine synthetase, beta-Grasp domain K01915 - 6.3.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000614 580.0
BYD3_k127_1804100_1 Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11785 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000507 361.0
BYD3_k127_1804100_10 - - - - 0.00000000000000000000003563 110.0
BYD3_k127_1804100_11 His Kinase A (phosphoacceptor) domain - - - 0.00000000000002333 85.0
BYD3_k127_1804100_12 two component, sigma54 specific, transcriptional regulator, Fis family K02481,K07713 - - 0.0000003963 57.0
BYD3_k127_1804100_2 HD domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002052 327.0
BYD3_k127_1804100_3 metal-dependent phosphohydrolase, HD sub domain K03698 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001232 272.0
BYD3_k127_1804100_4 LemA family K03744 - - 0.00000000000000000000000000000000000000000000000000000002287 203.0
BYD3_k127_1804100_5 Belongs to the peptidase M48B family K03799 - - 0.000000000000000000000000000000000000000000000000000006113 202.0
BYD3_k127_1804100_6 MerR HTH family regulatory protein - - - 0.000000000000000000000000000000003191 139.0
BYD3_k127_1804100_7 Receptor family ligand binding region K01999 - - 0.000000000000000000000000000000006221 142.0
BYD3_k127_1804100_8 Cold shock protein K03704 - - 0.0000000000000000000000000002946 116.0
BYD3_k127_1804100_9 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated - - - 0.000000000000000000000005519 109.0
BYD3_k127_1902555_0 HEAT repeats - - - 0.0000000000000000000000000000000003392 149.0
BYD3_k127_1902555_1 PFAM peptidase M18 aminopeptidase I - - - 0.000000000000000000000000000000005545 130.0
BYD3_k127_1902555_2 ATPases associated with a variety of cellular activities - - - 0.0000000000000007812 83.0
BYD3_k127_1957097_0 polyketide synthase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005303 602.0
BYD3_k127_1966149_0 Cytochrome P450 K00493 - 1.14.14.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002434 336.0
BYD3_k127_1966149_1 Calcineurin-like phosphoesterase K07098 - - 0.0000000000000000000000000000000000000000000000000004198 188.0
BYD3_k127_1966149_2 adenylyl cyclase class-3 4 guanylyl cyclase - - - 0.0000000000181 74.0
BYD3_k127_1966149_3 Cytochrome P450 - - - 0.0000000552 63.0
BYD3_k127_1971257_0 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001951 518.0
BYD3_k127_1971257_1 TamB, inner membrane protein subunit of TAM complex K09800 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003362 486.0
BYD3_k127_1971257_10 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.0000000000000000001204 102.0
BYD3_k127_1971257_2 Binding-protein-dependent transport system inner membrane component K02033 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004131 436.0
BYD3_k127_1971257_3 Surface antigen K07277 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001066 413.0
BYD3_k127_1971257_4 Sigma-54 interaction domain K02481 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006405 342.0
BYD3_k127_1971257_5 PFAM Peptidase S13, D-Ala-D-Ala carboxypeptidase C K07259 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000008654 268.0
BYD3_k127_1971257_6 Haloacid dehalogenase-like hydrolase - - - 0.000000000000000000000000000000000000000000000000000006049 210.0
BYD3_k127_1971257_7 Diacylglycerol kinase catalytic domain - - - 0.0000000000000000000000000000000000000001055 163.0
BYD3_k127_1971257_8 NlpC/P60 family - - - 0.000000000000000000000000000000001557 141.0
BYD3_k127_1971257_9 Pyridine nucleotide-disulphide oxidoreductase K21567 - 1.18.1.2,1.19.1.1 0.000000000000000000005533 101.0
BYD3_k127_1975549_0 E1-E2 ATPase K01533 - 3.6.3.4 4.597e-305 951.0
BYD3_k127_1975549_1 Multicopper oxidase K00368,K22348 - 1.16.3.3,1.7.2.1 2.108e-206 655.0
BYD3_k127_1975549_2 Peptidase dimerisation domain K13049 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004064 514.0
BYD3_k127_1975549_3 ornithine cyclodeaminase activity K01750,K18258,K19244 - 1.4.1.1,1.5.1.25,4.3.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003419 312.0
BYD3_k127_1975549_4 ketosteroid isomerase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008491 307.0
BYD3_k127_1975549_5 Chromate resistance exported protein - - - 0.0000000000000000000000000000000000000258 151.0
BYD3_k127_1975549_6 - - - - 0.000000000000000000002636 108.0
BYD3_k127_2005062_0 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 - 6.5.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001367 617.0
BYD3_k127_2005062_1 Pyrimidine nucleoside phosphorylase C-terminal domain K00756 - 2.4.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003145 571.0
BYD3_k127_2005062_2 Protein kinase domain K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006973 386.0
BYD3_k127_2005062_3 Putative adhesin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002475 283.0
BYD3_k127_2005062_4 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000007705 181.0
BYD3_k127_2005062_5 4-vinyl reductase, 4VR - - - 0.0000000000000003035 86.0
BYD3_k127_2005062_6 diguanylate cyclase K02488 - 2.7.7.65 0.0000000000000009347 88.0
BYD3_k127_2005062_7 YtxH-like protein - - - 0.00002929 49.0
BYD3_k127_2012850_0 elongation factor G K02355 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005709 551.0
BYD3_k127_2012850_1 Protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001757 425.0
BYD3_k127_2012850_2 phosphorelay signal transduction system K07713 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001349 390.0
BYD3_k127_2012850_3 Regulator of chromosome condensation (RCC1) repeat - - - 0.00000000000000000000000000000000000000000000000002177 200.0
BYD3_k127_2012850_4 Protein of Unknown function (DUF2784) - - - 0.000000000000000000000000000000000000003046 153.0
BYD3_k127_2012850_6 NB-ARC domain - - - 0.0001045 55.0
BYD3_k127_2020433_0 Belongs to the MurCDEF family K01924 - 6.3.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005187 377.0
BYD3_k127_2020433_1 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006793 274.0
BYD3_k127_2020433_2 Cell division protein FtsQ K03589 - - 0.000000001351 63.0
BYD3_k127_2020433_3 Cell division protein FtsQ K03589 - - 0.000000002917 60.0
BYD3_k127_2027259_0 Peptidase family M1 domain - - - 6.754e-226 718.0
BYD3_k127_2027259_1 PFAM Alcohol dehydrogenase GroES-like domain K00344 - 1.6.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001304 397.0
BYD3_k127_2027259_2 Bacterial transcriptional activator domain K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001655 355.0
BYD3_k127_2027259_3 Multicopper oxidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002757 323.0
BYD3_k127_2027259_4 Protein kinase domain K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000007677 211.0
BYD3_k127_2027259_5 ECF sigma factor - - - 0.0000000000000000000000000000000000000000000001547 175.0
BYD3_k127_2027259_6 - - - - 0.00000000000000000000000000000000000000000005566 168.0
BYD3_k127_2027259_7 Domain of unknown function (DUF4440) - - - 0.000000000128 69.0
BYD3_k127_2027259_8 - - - - 0.0002451 48.0
BYD3_k127_2078777_0 protein kinase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003856 428.0
BYD3_k127_2078777_1 Sugar (and other) transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001942 383.0
BYD3_k127_2078777_2 Serine/threonine phosphatases, family 2C, catalytic domain K01090,K20074 - 3.1.3.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007132 349.0
BYD3_k127_2078777_3 Serine/Threonine protein kinases, catalytic domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004822 338.0
BYD3_k127_2078777_4 ABC transporter K01990,K09695 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002122 337.0
BYD3_k127_2078777_5 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005522 298.0
BYD3_k127_2078777_6 ECF sigma factor - - - 0.00000000000000000000000000000000000000000000000000000002404 222.0
BYD3_k127_2152526_0 Transglycosylase K21464 - 2.4.1.129,3.4.16.4 6.91e-234 745.0
BYD3_k127_2152526_1 Hsp70 protein K03569 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000245 475.0
BYD3_k127_2152526_2 MatE K03327 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001071 403.0
BYD3_k127_2152526_3 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 - - 0.00000000000000000000000000000000000000000000000000000000000000007406 229.0
BYD3_k127_2152526_4 Bax inhibitor 1 like - - - 0.000000000000000000000000000000000000000000000000000000002901 208.0
BYD3_k127_2152526_5 thiolester hydrolase activity K07100 GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0030312,GO:0044424,GO:0044444,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000002389 196.0
BYD3_k127_2152526_6 Cold shock protein domain K03704 - - 0.0000000000000000000000000000000000461 138.0
BYD3_k127_2152526_7 Domain of unknown function (DUF4342) - - - 0.00000000000000004049 83.0
BYD3_k127_2152526_8 Ribosomal protein S21 K02970 - - 0.00000000000007844 74.0
BYD3_k127_2165123_0 Amino acid adenylation domain - - - 1.99e-206 695.0
BYD3_k127_2165123_1 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.0000000000000000000000000000000000000000000000000000006098 196.0
BYD3_k127_2165123_2 Threonylcarbamoyl adenosine biosynthesis protein TsaE K06925,K07102 - 2.7.1.221 0.00000000000000000000000000000852 124.0
BYD3_k127_2165123_3 This enzyme acetylates the N-terminal alanine of ribosomal protein S18 K03789 - 2.3.1.128 0.000000000000000000000000001424 119.0
BYD3_k127_2165123_4 Belongs to the P-Pant transferase superfamily K06133 GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008897,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009987,GO:0016053,GO:0016740,GO:0016772,GO:0016780,GO:0019752,GO:0019878,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 - 0.00000000000000000000000177 112.0
BYD3_k127_2165123_5 PFAM Peptidase M22, glycoprotease K14742 - - 0.000000000000000006936 95.0
BYD3_k127_2165123_6 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 0.00001072 49.0
BYD3_k127_2166033_0 TRANSCRIPTIONal - - - 0.000000000000000000000000000000000000000000628 162.0
BYD3_k127_2166033_1 YCII-related domain - - - 0.000000000000000000000000000000000000005731 151.0
BYD3_k127_2166033_2 acetyltransferase - - - 0.00000000000000000009479 99.0
BYD3_k127_2166033_3 Activator of Hsp90 ATPase - - - 0.0000000000001393 70.0
BYD3_k127_2166033_4 Activator of Hsp90 ATPase - - - 0.0001018 47.0
BYD3_k127_2166033_5 23S rRNA-intervening sequence protein - - - 0.0001442 49.0
BYD3_k127_220582_0 Prolyl oligopeptidase K01322 - 3.4.21.26 0.0 1080.0
BYD3_k127_220582_1 metallopeptidase activity K03568 - - 1.42e-222 700.0
BYD3_k127_220582_10 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides K08281 - 3.5.1.19 0.0000000000000000000000000000005981 132.0
BYD3_k127_220582_11 - - - - 0.0000000000000000000000000003269 132.0
BYD3_k127_220582_12 PFAM aminotransferase class V - - - 0.00000000000000000000000000876 125.0
BYD3_k127_220582_13 PFAM peptidase T2 asparaginase 2 K01444,K13051 - 3.4.19.5,3.5.1.26 0.0000000000000000002199 92.0
BYD3_k127_220582_14 Aerotolerance regulator N-terminal - - - 0.000000000000000006385 98.0
BYD3_k127_220582_15 Putative modulator of DNA gyrase K03568 - - 0.00000000008953 62.0
BYD3_k127_220582_16 amine dehydrogenase activity - - - 0.000003304 61.0
BYD3_k127_220582_2 Putative modulator of DNA gyrase K03592 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005074 579.0
BYD3_k127_220582_3 Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP K00763 - 6.3.4.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006179 452.0
BYD3_k127_220582_4 ATPase family associated with various cellular activities (AAA) K03924 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001019 457.0
BYD3_k127_220582_5 PFAM Prenyltransferase squalene oxidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007931 365.0
BYD3_k127_220582_6 Belongs to the bacterial solute-binding protein 9 family K02077,K09815,K09818 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002278 322.0
BYD3_k127_220582_7 protein (some members contain a von Willebrand factor type A (vWA) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000006616 251.0
BYD3_k127_220582_8 dna ligase K01971 - 6.5.1.1 0.000000000000000000000000000000000000000000007123 179.0
BYD3_k127_220582_9 COG3668 Plasmid stabilization system protein - - - 0.00000000000000000000000000000000001704 137.0
BYD3_k127_2278368_0 Transcriptional regulatory protein, C terminal - - - 0.000000000000000000000000000000000000000000000000000000000000001701 247.0
BYD3_k127_2278368_1 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000005878 170.0
BYD3_k127_2287486_0 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 3.541e-217 718.0
BYD3_k127_2287486_1 Insulinase (Peptidase family M16) K07263 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003267 472.0
BYD3_k127_2287486_10 TIGRFAM outer membrane autotransporter barrel - - - 0.000000000001083 80.0
BYD3_k127_2287486_2 phosphorelay signal transduction system K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006659 462.0
BYD3_k127_2287486_3 Peptidase, M16 K07263 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003502 434.0
BYD3_k127_2287486_4 Insulinase (Peptidase family M16) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000288 360.0
BYD3_k127_2287486_5 Insulinase (Peptidase family M16) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002577 356.0
BYD3_k127_2287486_6 ATP-dependent helicase K03579 - 3.6.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001174 342.0
BYD3_k127_2287486_7 NUDIX domain K01515 - 3.6.1.13 0.00000000000000000000000000000000000000000000000000000000000000006841 231.0
BYD3_k127_2287486_8 DNA polymerase III, delta subunit K02340 - 2.7.7.7 0.00000000000000000000000000000000000000000000002041 184.0
BYD3_k127_2287486_9 Sporulation related domain - - - 0.0000000000009693 81.0
BYD3_k127_228967_0 protein kinase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008518 591.0
BYD3_k127_228967_1 Protein of unknown function (DUF1624) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001413 497.0
BYD3_k127_228967_2 regulation of response to stimulus - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002262 420.0
BYD3_k127_228967_3 Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003128 317.0
BYD3_k127_228967_4 Biotin-lipoyl like - - - 0.0000000000000000000000000000000000000000000000000000000000002182 227.0
BYD3_k127_228967_5 acetyltransferase K18816 - 2.3.1.82 0.000000000000000000000000000000000000000002311 171.0
BYD3_k127_228967_6 Carbon-nitrogen hydrolase K01950 - 6.3.5.1 0.000000000000000000000000000000000000007097 168.0
BYD3_k127_228967_7 Kelch motif K10442 - - 0.00000000000000000000000000000000002162 153.0
BYD3_k127_228967_8 WD40-like Beta Propeller Repeat K03641 - - 0.0000000000000001614 94.0
BYD3_k127_228967_9 Protein of unknown function (DUF4230) - - - 0.000002045 57.0
BYD3_k127_2300039_0 protein kinase activity K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003488 458.0
BYD3_k127_2300039_1 Protein kinase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009965 455.0
BYD3_k127_2300039_2 Nodulation protein S (NodS) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000008312 245.0
BYD3_k127_2338375_0 NmrA-like family K01784 - 5.1.3.2 0.000000000000000000000000000000000000000000000000000009816 207.0
BYD3_k127_2338375_1 acetyltransferase - - - 0.00000000000000000000000000000000000000000000001565 177.0
BYD3_k127_2338375_2 Sigma-70 region 2 K03088 - - 0.0000000000000000000000000000000003814 137.0
BYD3_k127_2338375_3 phosphatidate phosphatase activity K00901,K01096,K19302 - 2.7.1.107,3.1.3.27,3.1.3.4,3.1.3.81,3.6.1.27 0.00000000000000000000000000000004722 138.0
BYD3_k127_2338375_4 Copper binding proteins, plastocyanin/azurin family K02638 - - 0.000000000000000000000001104 109.0
BYD3_k127_2381182_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 4.627e-219 691.0
BYD3_k127_2381182_1 diguanylate cyclase K02488 - 2.7.7.65 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005173 470.0
BYD3_k127_2381182_2 Threonine dehydratase K01754 - 4.3.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000002206 258.0
BYD3_k127_2393829_0 Asparagine synthase K01953 - 6.3.5.4 8.545e-223 709.0
BYD3_k127_2393829_1 PFAM NAD-dependent epimerase dehydratase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002016 455.0
BYD3_k127_2393829_2 Belongs to the DegT DnrJ EryC1 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004016 368.0
BYD3_k127_2393829_3 FAD dependent oxidoreductase K00111 - 1.1.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000891 302.0
BYD3_k127_2393829_4 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000002699 237.0
BYD3_k127_2393829_5 COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily K00973,K02617 - 2.7.7.24 0.000000000000000000000000000000000000000000000000000000000000002088 235.0
BYD3_k127_2393829_6 polysaccharide biosynthetic process - - - 0.000000000000003003 90.0
BYD3_k127_2393829_7 Glycosyl transferases group 1 - - - 0.00000000116 69.0
BYD3_k127_2439520_0 Belongs to the citrate synthase family K01647 - 2.3.3.1 2.485e-194 629.0
BYD3_k127_2439520_1 Peptidase family M28 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000015 330.0
BYD3_k127_2439520_2 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) K09457 - 1.7.1.13 0.00000000000000000000000000000000000007935 146.0
BYD3_k127_2439520_3 Bacterial transcriptional activator domain - - - 0.000000000003283 79.0
BYD3_k127_2454080_0 FtsX-like permease family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009231 296.0
BYD3_k127_2454080_1 Transcriptional regulator PadR-like family - - - 0.00000000000000001839 83.0
BYD3_k127_2470021_0 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001668 349.0
BYD3_k127_2470021_1 protein kinase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004416 328.0
BYD3_k127_2470021_2 LytTr DNA-binding domain K02477 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001301 286.0
BYD3_k127_2470021_3 Tetratricopeptide repeat K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000005824 248.0
BYD3_k127_2470021_4 DNA-templated transcription, initiation K02405 - - 0.0000000000000000000000000000000000000000000003397 175.0
BYD3_k127_2470021_5 Antibiotic biosynthesis monooxygenase - - - 0.000000000000000000000000000000001938 131.0
BYD3_k127_2470021_6 Putative lumazine-binding - - - 0.000000000000000000000000000000002302 147.0
BYD3_k127_2470021_7 - - - - 0.000000000000000000000001146 119.0
BYD3_k127_2470021_8 SnoaL-like domain - - - 0.00000004638 62.0
BYD3_k127_2507278_0 protein kinase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004709 607.0
BYD3_k127_2507278_1 Belongs to the D-alanine--D-alanine ligase family K01921,K01955 - 6.3.2.4,6.3.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002416 290.0
BYD3_k127_2507278_2 - K02450 - - 0.00000000000000000000000000000000000000000000000000000000000000000000208 246.0
BYD3_k127_2507278_3 - - - - 0.000000000000000000000000000000000000000000000007785 178.0
BYD3_k127_2507278_4 PDZ domain - - - 0.0000000000000000005681 98.0
BYD3_k127_2507278_5 Protein of unknown function (DUF3568) - - - 0.0000000000006313 75.0
BYD3_k127_2507278_6 helix_turn_helix multiple antibiotic resistance protein - - - 0.000000006119 60.0
BYD3_k127_2533945_0 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001541 436.0
BYD3_k127_2533945_1 Bacterial protein of unknown function (DUF885) - - - 0.000000000000000000000000000000000000000000000000000000000006004 229.0
BYD3_k127_2533945_2 Mannose-6-phosphate isomerase - - - 0.000000000000000000000000000000000000000127 157.0
BYD3_k127_2533945_3 Periplasmic nitrate reductase maturation protein NapF K02573 - - 0.0000000002618 64.0
BYD3_k127_2535549_0 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001618 317.0
BYD3_k127_2535549_1 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03469 - 3.1.26.4 0.0000000000000000000000000000000000000000000000001228 188.0
BYD3_k127_2535549_2 Thiolase, C-terminal domain K07508 - 2.3.1.16 0.0000000000000002246 82.0
BYD3_k127_2535549_3 - - - - 0.000000002231 69.0
BYD3_k127_2535549_4 - - - - 0.00005475 52.0
BYD3_k127_2552255_0 IMS family HHH motif K02346 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000003793 259.0
BYD3_k127_2552255_1 protein kinase activity K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000001042 251.0
BYD3_k127_2749272_0 4Fe-4S single cluster domain K07001 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005098 270.0
BYD3_k127_2749272_1 Glycosyl transferases group 1 K13668 - 2.4.1.346 0.000000000000000000000000000000000000000000000000000227 200.0
BYD3_k127_2749272_2 Glycosyl transferase, family 2 - - - 0.000000000000000000000000000000000000003521 154.0
BYD3_k127_2749272_3 Spore maturation protein cgeB K06320 - - 0.000000000000000000000000337 117.0
BYD3_k127_2749272_4 PFAM Glycosyl transferases group 1 - - - 0.00000000000000001233 94.0
BYD3_k127_2749272_5 Glycosyl transferase, family 2 - - - 0.000000001656 63.0
BYD3_k127_2751897_0 Calcineurin-like phosphoesterase superfamily domain K03547 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000271 380.0
BYD3_k127_2751897_1 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001229 378.0
BYD3_k127_2752387_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 4.486e-225 715.0
BYD3_k127_2752387_1 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP K02837 GO:0003674,GO:0003676,GO:0003723,GO:0003747,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0016150,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001333 615.0
BYD3_k127_2752387_2 response to UV K13281 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001485 359.0
BYD3_k127_2752387_3 cellular manganese ion homeostasis - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001782 363.0
BYD3_k127_2752387_4 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000003046 143.0
BYD3_k127_2775216_0 membrane organization - - - 2.941e-206 671.0
BYD3_k127_2775216_1 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008644 569.0
BYD3_k127_2775216_10 DinB family - - - 0.00000000000000000000000000000001026 138.0
BYD3_k127_2775216_11 Amidohydrolase family - - - 0.00000000000000003053 91.0
BYD3_k127_2775216_2 Protein kinase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009616 377.0
BYD3_k127_2775216_3 Protein kinase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003349 338.0
BYD3_k127_2775216_4 protein kinase activity K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000001482 259.0
BYD3_k127_2775216_5 Cupin 2, conserved barrel domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000006632 250.0
BYD3_k127_2775216_6 hydrolase activity, acting on ester bonds K01259 - 3.4.11.5 0.00000000000000000000000000000000000000000000000000000000003393 218.0
BYD3_k127_2775216_7 Domain of unknown function (DUF4956) - - - 0.000000000000000000000000000000000000000000000000000005213 208.0
BYD3_k127_2775216_8 Glyoxalase-like domain - - - 0.0000000000000000000000000000000000000000000000001232 181.0
BYD3_k127_2775216_9 methyltransferase activity - - - 0.00000000000000000000000000000000000000000000000764 176.0
BYD3_k127_3048282_0 C-terminus of AA_permease K03294 - - 1.529e-245 766.0
BYD3_k127_3048282_1 Myo-inositol-1-phosphate synthase K01858 - 5.5.1.4 2.928e-213 683.0
BYD3_k127_3048282_10 Beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005415 314.0
BYD3_k127_3048282_11 Iron-sulphur cluster biosynthesis - - - 0.0000000000000000000000000000000000000005832 154.0
BYD3_k127_3048282_12 Gram-negative bacterial TonB protein C-terminal K03832 - - 0.00000000000000000000000000000000000001121 153.0
BYD3_k127_3048282_13 Biopolymer transport protein ExbD/TolR K03559 - - 0.00000000000000000000000000000001785 133.0
BYD3_k127_3048282_14 CDP-alcohol phosphatidyltransferase K00995 - 2.7.8.5 0.000000000000000000000000000001116 139.0
BYD3_k127_3048282_15 BadF BadG BcrA BcrD - GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005975,GO:0006040,GO:0006044,GO:0006082,GO:0006793,GO:0006796,GO:0008144,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0017076,GO:0019200,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0045127,GO:0046835,GO:0071704,GO:0097159,GO:0097172,GO:0097367,GO:1901071,GO:1901135,GO:1901265,GO:1901363 - 0.00000000000000000000002855 114.0
BYD3_k127_3048282_16 - - - - 0.000000000000000001897 95.0
BYD3_k127_3048282_17 PFAM Biopolymer transport protein ExbD TolR K03559,K03560 - - 0.00000000000000002647 87.0
BYD3_k127_3048282_18 - - - - 0.0000000000000001791 84.0
BYD3_k127_3048282_2 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001954 464.0
BYD3_k127_3048282_3 Glycosyl hydrolase family 3 C-terminal domain K01207 - 3.2.1.52 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003813 450.0
BYD3_k127_3048282_4 Sodium:solute symporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002049 421.0
BYD3_k127_3048282_5 PAS domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001881 379.0
BYD3_k127_3048282_6 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002077 348.0
BYD3_k127_3048282_7 Transcriptional regulatory protein, C terminal K02483,K07665 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000178 324.0
BYD3_k127_3048282_8 MotA/TolQ/ExbB proton channel family K03562 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003637 320.0
BYD3_k127_3048282_9 Protein of unknown function (DUF1343) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003771 326.0
BYD3_k127_3071207_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000328 406.0
BYD3_k127_3071207_1 Pyridine nucleotide-disulphide oxidoreductase K21567 - 1.18.1.2,1.19.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003744 381.0
BYD3_k127_3071207_2 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735 - 4.2.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000003035 281.0
BYD3_k127_3071207_3 Cobalamin adenosyltransferase K00798 - 2.5.1.17 0.0000000000000000000000000000000000000000000000000000000000000001045 226.0
BYD3_k127_307179_0 Carbohydrate phosphorylase K00688 - 2.4.1.1 1.283e-301 942.0
BYD3_k127_307179_1 Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate K01712 - 4.2.1.49 2.165e-291 926.0
BYD3_k127_307179_10 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00324 - 1.6.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003654 434.0
BYD3_k127_307179_11 Belongs to the glycosyl hydrolase 57 family K16149 - 2.4.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001826 431.0
BYD3_k127_307179_12 Glucose / Sorbosone dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002614 407.0
BYD3_k127_307179_13 GlcNAc-PI de-N-acetylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008278 337.0
BYD3_k127_307179_14 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002458 312.0
BYD3_k127_307179_15 beta-keto acid cleavage enzyme K18013 - 2.3.1.247 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004014 313.0
BYD3_k127_307179_16 Belongs to the glycosyl hydrolase 57 family K22451 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.4.1.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002424 290.0
BYD3_k127_307179_17 - - - - 0.0000000000000000000000000000000000000000000000000000000000003137 226.0
BYD3_k127_307179_18 Belongs to the glycosyl hydrolase 57 family K22451 - 2.4.1.25 0.00000000000000000000000000000000000000000000000000745 192.0
BYD3_k127_307179_19 Sigma-70 region 2 K03088 - - 0.0000000000000000000000000000000000000000000000001433 184.0
BYD3_k127_307179_2 ABC transporter - - - 2.666e-253 796.0
BYD3_k127_307179_20 domain protein K13735 - - 0.00000000000000000000000000000000000000000001066 186.0
BYD3_k127_307179_21 pilus organization - - - 0.0000000000000000000000000000000000000000003331 175.0
BYD3_k127_307179_22 - - - - 0.0000000000000000000000000000000000000001013 161.0
BYD3_k127_307179_23 OmpA family - - - 0.00000000000000000000000000000000000003798 153.0
BYD3_k127_307179_24 Fibronectin type 3 domain - - - 0.00000000000000000000000000000000000004544 164.0
BYD3_k127_307179_25 - - - - 0.000000000000000000000000000000000000149 154.0
BYD3_k127_307179_26 Peptidyl-prolyl cis-trans K01802,K03772 - 5.2.1.8 0.000000000000000000000000000000000004516 143.0
BYD3_k127_307179_27 fimbrial usher porin activity - - - 0.000000000000000000000000000000000717 152.0
BYD3_k127_307179_28 SWI complex, BAF60b domains - - - 0.0000000000000000000000000000001678 131.0
BYD3_k127_307179_29 4TM region of pyridine nucleotide transhydrogenase, mitoch K00324 - 1.6.1.2 0.0000000000000000000000000004789 121.0
BYD3_k127_307179_3 lysine biosynthetic process via aminoadipic acid - - - 5.265e-245 784.0
BYD3_k127_307179_30 Protein of unknown function (DUF971) K03593 - - 0.000000000000000008236 94.0
BYD3_k127_307179_31 Sugar-transfer associated ATP-grasp - - - 0.00000000000000009014 95.0
BYD3_k127_307179_32 Sugar-transfer associated ATP-grasp - - - 0.0000000000000001159 93.0
BYD3_k127_307179_33 Putative adhesin - - - 0.000000000000004556 87.0
BYD3_k127_307179_34 - - - - 0.0000000000008623 76.0
BYD3_k127_307179_35 - - - - 0.000000000001454 78.0
BYD3_k127_307179_37 Acetyltransferase (GNAT) domain K03789 - 2.3.1.128 0.00000000003981 74.0
BYD3_k127_307179_38 domain, Protein K01729,K03561,K09942,K12287,K20276 - 4.2.2.3 0.00000000004684 76.0
BYD3_k127_307179_4 Formiminotransferase domain, N-terminal subdomain K00603,K13990 - 2.1.2.5,4.3.1.4 3.836e-220 698.0
BYD3_k127_307179_41 - - - - 0.00001828 58.0
BYD3_k127_307179_42 Belongs to the 'phage' integrase family - - - 0.0008731 44.0
BYD3_k127_307179_43 Mitochondrial genome maintenance MGM101 - GO:0000002,GO:0000725,GO:0000733,GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0006139,GO:0006259,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007005,GO:0008150,GO:0008152,GO:0009295,GO:0009987,GO:0016043,GO:0031974,GO:0032392,GO:0033554,GO:0034641,GO:0036297,GO:0042645,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0050896,GO:0051276,GO:0051716,GO:0070013,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363 - 0.0008845 52.0
BYD3_k127_307179_5 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 - 2.4.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003283 604.0
BYD3_k127_307179_6 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001597 528.0
BYD3_k127_307179_7 Belongs to the metallo-dependent hydrolases superfamily. HutI family K01468 - 3.5.2.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008665 495.0
BYD3_k127_307179_8 Belongs to the agmatine deiminase family K10536 - 3.5.3.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001856 462.0
BYD3_k127_307179_9 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K12251 - 3.5.1.53 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008233 456.0
BYD3_k127_3107155_0 Peptidase family M3 K08602 - - 1.248e-207 690.0
BYD3_k127_3107155_1 Binding-protein-dependent transport system inner membrane component K02011 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008588 430.0
BYD3_k127_3107155_2 Sugar (and other) transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005553 340.0
BYD3_k127_3107155_3 Belongs to the ABC transporter superfamily K02010,K02052 - 3.6.3.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000185 296.0
BYD3_k127_3107155_4 Bacterial extracellular solute-binding protein K02012 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005344 299.0
BYD3_k127_3107155_5 PFAM GlcNAc-PI de-N-acetylase - - - 0.00000000000000000000000000000000000000000000000000000005613 201.0
BYD3_k127_3107155_6 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0043021,GO:0043022,GO:0044424,GO:0044444,GO:0044464,GO:0044877 - 0.0000000000000000000005404 107.0
BYD3_k127_3107155_7 Predicted membrane protein (DUF2339) - - - 0.00000000000000812 89.0
BYD3_k127_31262_0 - - GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008757,GO:0016278,GO:0016740,GO:0016741,GO:0032259 - 3.295e-292 969.0
BYD3_k127_31262_1 CarboxypepD_reg-like domain - - - 1.3e-255 826.0
BYD3_k127_31262_10 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 GO:0003674,GO:0003824,GO:0004311,GO:0004659,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0015980,GO:0016020,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044464,GO:0045333,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:0071944,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.141 0.0000000000000000000000000000002871 136.0
BYD3_k127_31262_11 Helix-hairpin-helix motif K02237 - - 0.000000000000001847 85.0
BYD3_k127_31262_12 competence protein ComEA helix-hairpin-helix K02237 - - 0.00000000003912 72.0
BYD3_k127_31262_2 Type II secretion system (T2SS), protein E, N-terminal domain K02652 - - 1.516e-235 751.0
BYD3_k127_31262_3 Type II/IV secretion system protein K02669 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001338 580.0
BYD3_k127_31262_4 Type II secretion system (T2SS), protein F K02653 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000703 539.0
BYD3_k127_31262_5 Predicted permease YjgP/YjgQ family K11720 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000007539 277.0
BYD3_k127_31262_6 Predicted permease YjgP/YjgQ family K07091 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001079 267.0
BYD3_k127_31262_7 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. - - - 0.0000000000000000000000000000000000000000000000000001558 194.0
BYD3_k127_31262_8 Glutamine cyclotransferase - - - 0.0000000000000000000000000000000000000000000000000001745 198.0
BYD3_k127_31262_9 COG2335 Secreted and surface protein containing fasciclin-like repeats - - - 0.000000000000000000000000000000000000004168 153.0
BYD3_k127_3161089_0 tRNA synthetases class II (D, K and N) K01893 - 6.1.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007973 575.0
BYD3_k127_3161089_1 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003877 521.0
BYD3_k127_3161089_10 Protein tyrosine kinase - - - 0.00000000000002508 87.0
BYD3_k127_3161089_12 - - - - 0.00000000005239 76.0
BYD3_k127_3161089_2 Phosphotransfer between the C1 and C5 carbon atoms of pentose K01839 - 5.4.2.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001098 485.0
BYD3_k127_3161089_3 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) K03110 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002941 316.0
BYD3_k127_3161089_4 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000209 267.0
BYD3_k127_3161089_5 Peptidase family M23 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002482 261.0
BYD3_k127_3161089_6 MazG nucleotide pyrophosphohydrolase domain K02428 - 3.6.1.66 0.00000000000000000000000000000000000000000000000000000000000000000000000318 252.0
BYD3_k127_3161089_7 bacterial-type flagellum-dependent cell motility - - - 0.0000000000000000000000000000000000000000000000000001213 207.0
BYD3_k127_3161089_8 This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis K01489 - 3.5.4.5 0.000000000000000000000000000000000005319 140.0
BYD3_k127_3161089_9 - - - - 0.0000000000000000000158 106.0
BYD3_k127_3253484_0 PLD-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002624 274.0
BYD3_k127_3253484_1 OmpA family - - - 0.000000000000000000000000000000000000000000000000000000000000000002396 240.0
BYD3_k127_3253484_2 Pfam:UPF0118 - - - 0.00000000000000000000000000000000000000000000000000000000000000009644 234.0
BYD3_k127_3253484_3 Protein kinase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000002021 183.0
BYD3_k127_3253484_4 Transmembrane secretion effector - - - 0.00000000000000000000000002465 108.0
BYD3_k127_3253484_5 PFAM Bacterial transcriptional activator domain - - - 0.00000000000000000000000002737 126.0
BYD3_k127_3253484_7 Domain of unknown function (DUF4956) - - - 0.000000000000004127 89.0
BYD3_k127_3253484_8 - - - - 0.00000000001195 70.0
BYD3_k127_3286336_0 Sodium:solute symporter family - - - 2.397e-277 865.0
BYD3_k127_3286336_1 aminopeptidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001578 344.0
BYD3_k127_3286336_10 Belongs to the ClpA ClpB family K03695,K03696 - - 0.00000000001446 74.0
BYD3_k127_3286336_2 aminoglycoside 3-N-acetyltransferase activity K00662 - 2.3.1.81 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001643 344.0
BYD3_k127_3286336_3 Nucleotidyl transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001833 255.0
BYD3_k127_3286336_4 homoserine kinase activity K02204,K13059 - 2.7.1.162,2.7.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000003971 257.0
BYD3_k127_3286336_5 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.00000000000000000000000000000000000000000000000000000000000000000000021 248.0
BYD3_k127_3286336_6 D-aminopeptidase K16203 - - 0.0000000000000000000000000000001757 141.0
BYD3_k127_3286336_7 Methyltransferase domain - - - 0.0000000000000000005222 97.0
BYD3_k127_3286336_8 Belongs to the UPF0434 family K09791 - - 0.00000000000000004489 87.0
BYD3_k127_3286336_9 - - - - 0.0000000000001318 72.0
BYD3_k127_3298347_0 Bacterial transcriptional activator domain K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001069 412.0
BYD3_k127_3298347_1 cellular response to dsDNA - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001712 264.0
BYD3_k127_3298347_10 META domain K09914 - - 0.00000000007293 70.0
BYD3_k127_3298347_2 NUDIX hydrolase K03574 - 3.6.1.55 0.00000000000000000000000000000000000000000000000000000000002421 214.0
BYD3_k127_3298347_3 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000008761 177.0
BYD3_k127_3298347_4 Acetyltransferase (GNAT) family - - - 0.000000000000000000000000000000000000006176 152.0
BYD3_k127_3298347_5 Integrin alpha (beta-propellor repeats). - - - 0.0000000000000000000000000000000000001984 156.0
BYD3_k127_3298347_6 - - - - 0.0000000000000000000000000000001864 127.0
BYD3_k127_3298347_7 Involved in the TonB-independent uptake of proteins K03641 GO:0003674,GO:0005215,GO:0006810,GO:0008150,GO:0019534,GO:0022857,GO:0051179,GO:0051234,GO:0055085,GO:1901998 - 0.0000000000000000000000000000003504 134.0
BYD3_k127_3298347_8 Protein of unknown function (DUF3037) - - - 0.00000000000000000000000000001333 135.0
BYD3_k127_3298347_9 - - - - 0.0000000000001028 74.0
BYD3_k127_3299150_0 LytB protein K03527 - 1.17.7.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001871 491.0
BYD3_k127_3299150_1 pyrroloquinoline quinone binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003632 401.0
BYD3_k127_3299150_2 NAD(P)H quinone oxidoreductase, PIG3 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007043 326.0
BYD3_k127_3299150_3 converts alpha-aldose to the beta-anomer - - - 0.0000000000000000000000000000000000000000000000003942 195.0
BYD3_k127_3299150_4 Polysaccharide pyruvyl transferase K19431 - - 0.00000000000000000000000000001839 124.0
BYD3_k127_3299150_5 - - - - 0.00000000000000000009781 105.0
BYD3_k127_3299150_6 PAS modulated sigma54 specific transcriptional regulator, Fis family - - - 0.000004342 55.0
BYD3_k127_3319894_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0 1181.0
BYD3_k127_3319894_1 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily K01465 - 3.5.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003027 620.0
BYD3_k127_3319894_10 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008042 336.0
BYD3_k127_3319894_11 FecCD transport family K02013,K02015 - 3.6.3.34 0.0000000000000000000000000000000000000000000000000000000000000000000008086 259.0
BYD3_k127_3319894_12 Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant K02825 - 2.4.2.9 0.000000000000000000000000000000000000000000000000000000000001794 222.0
BYD3_k127_3319894_13 ABC transporter K02013 - 3.6.3.34 0.00000000000000000000000000000000000000000000000000000000007131 225.0
BYD3_k127_3319894_14 Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain K17247 - - 0.0000000000000000000000000000000000000000000000000867 185.0
BYD3_k127_3319894_15 Periplasmic binding protein K02016 - - 0.0000000000000000000000000000000000000000000000002279 190.0
BYD3_k127_3319894_16 Bifunctional nuclease K08999 - - 0.000000000000000000000000000000000000000000000001409 179.0
BYD3_k127_3319894_17 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K01563,K11991 - 3.5.4.33,3.8.1.5 0.000000000000000000000000000000000000000000000005536 179.0
BYD3_k127_3319894_18 Involved in DNA repair and RecF pathway recombination K03584 - - 0.0000000000000000000000000000000000000002037 168.0
BYD3_k127_3319894_19 exo-alpha-(2->6)-sialidase activity - - - 0.000000000000000000000000000000000000006696 164.0
BYD3_k127_3319894_2 TonB dependent receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001102 599.0
BYD3_k127_3319894_20 Cytochrome c - - - 0.0000000000000000000000000000000001124 149.0
BYD3_k127_3319894_21 PTS system mannose/fructose/sorbose family IID component K02796 - - 0.00000000000000000000000000005291 128.0
BYD3_k127_3319894_22 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.000000000000000000000006246 107.0
BYD3_k127_3319894_23 Domain of unknown function (DUF4154) - - - 0.00000000000000000000001658 113.0
BYD3_k127_3319894_24 PTS HPr component phosphorylation site K11189 - - 0.0000000000000000000001684 109.0
BYD3_k127_3319894_25 - - - - 0.000000000000000000005938 102.0
BYD3_k127_3319894_26 amino acid activation for nonribosomal peptide biosynthetic process - - - 0.0000000000008097 73.0
BYD3_k127_3319894_27 Zinc finger domain - - - 0.000000003283 65.0
BYD3_k127_3319894_28 Evidence 5 No homology to any previously reported sequences - - - 0.00000003037 61.0
BYD3_k127_3319894_29 Recombinase zinc beta ribbon domain - - - 0.0000003269 53.0
BYD3_k127_3319894_3 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain K00609 - 2.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008838 512.0
BYD3_k127_3319894_30 Recombinase zinc beta ribbon domain - - - 0.00003134 48.0
BYD3_k127_3319894_31 Domain of unknown function (DUF4440) - - - 0.0001577 50.0
BYD3_k127_3319894_4 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 GO:0003674,GO:0003824,GO:0004478,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016740,GO:0016765,GO:0044424,GO:0044444,GO:0044464 2.5.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005537 482.0
BYD3_k127_3319894_5 Part of the MsrPQ system that repairs oxidized cell envelope proteins containing methionine sulfoxide residues (Met- O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated cell envelope proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide K07147 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003479 458.0
BYD3_k127_3319894_6 TonB-dependent receptor K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003929 467.0
BYD3_k127_3319894_7 cobalamin-transporting ATPase activity K02014,K16092 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009657 436.0
BYD3_k127_3319894_8 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K01007,K08483 - 2.7.3.9,2.7.9.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003749 392.0
BYD3_k127_3319894_9 elongation factor SelB, winged helix K03833 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007183 371.0
BYD3_k127_3344090_0 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002493 558.0
BYD3_k127_3344090_1 Ami_3 K01448 - 3.5.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007642 372.0
BYD3_k127_3344090_2 Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate K07106 - 4.2.1.126 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001657 339.0
BYD3_k127_3344090_3 Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling K09001 - 2.7.1.170 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001408 336.0
BYD3_k127_3344090_4 PFAM Major Facilitator Superfamily K08218 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001536 326.0
BYD3_k127_3344090_5 Serine/threonine phosphatases, family 2C, catalytic domain K20074 - 3.1.3.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001367 301.0
BYD3_k127_3344090_6 Glycosyl hydrolase family 3 N terminal domain K05349 - 3.2.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000001229 268.0
BYD3_k127_3344090_7 Protein kinase domain K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000005655 250.0
BYD3_k127_3344090_8 peptidyl-tyrosine sulfation - - - 0.000000000000000001222 101.0
BYD3_k127_3374997_0 Participates in initiation and elongation during chromosome replication K02314 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005741 548.0
BYD3_k127_3374997_1 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007391 538.0
BYD3_k127_3374997_10 - K00241 - - 0.0000000000000000000000000000000000000000000000000000000003005 215.0
BYD3_k127_3374997_11 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) K00991 - 2.7.7.60 0.0000000000000000000000000000000000000000000000000006037 194.0
BYD3_k127_3374997_12 Telomere recombination K07566 - 2.7.7.87 0.000000000000000000000000000000000000000000000000001332 199.0
BYD3_k127_3374997_13 fumarate reductase, flavoprotein subunit K00239 - 1.3.5.1,1.3.5.4 0.00000000000000000000000000000000000000000000000005233 190.0
BYD3_k127_3374997_14 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K05788 - - 0.00000000000000000000000000000000000000000000007405 171.0
BYD3_k127_3374997_15 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily K03216 - 2.1.1.207 0.000000000000000000000000000000000000000000006164 167.0
BYD3_k127_3374997_16 Low molecular weight phosphatase family K01104 - 3.1.3.48 0.0000000000000000000000000000000000000000005575 162.0
BYD3_k127_3374997_17 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 GO:0000166,GO:0003674,GO:0003824,GO:0004764,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019632,GO:0019752,GO:0032787,GO:0036094,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050661,GO:0050662,GO:0055114,GO:0071704,GO:0097159,GO:1901265,GO:1901363,GO:1901576,GO:1901615 1.1.1.25 0.000000000000000000000000000000000000895 151.0
BYD3_k127_3374997_18 MoaE protein K03635 - 2.8.1.12 0.000000000000000000000000000000000647 136.0
BYD3_k127_3374997_19 Phosphoribosyl transferase domain - - - 0.0000000000000000000000000000021 129.0
BYD3_k127_3374997_2 Phosphoglycerate kinase K00927 - 2.7.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001737 513.0
BYD3_k127_3374997_20 Preprotein translocase SecG subunit K03075 - - 0.000000000000000004227 95.0
BYD3_k127_3374997_21 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits - - - 0.0000000000000001049 82.0
BYD3_k127_3374997_22 ThiS family K03636 - - 0.00000000000687 73.0
BYD3_k127_3374997_3 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain K00134 - 1.2.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006425 495.0
BYD3_k127_3374997_4 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009561 477.0
BYD3_k127_3374997_5 Carbamoyl-phosphate synthase small chain, CPSase domain K01956 - 6.3.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001698 477.0
BYD3_k127_3374997_6 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004004 403.0
BYD3_k127_3374997_7 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001593 397.0
BYD3_k127_3374997_8 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000001271 262.0
BYD3_k127_3374997_9 Uracil DNA glycosylase superfamily K21929 - 3.2.2.27 0.00000000000000000000000000000000000000000000000000000000000000000004152 242.0
BYD3_k127_3469365_0 Glycosyl hydrolase family 1 K00067 - 1.1.1.133 4.039e-289 905.0
BYD3_k127_3469365_1 glycoside hydrolase family 2 sugar binding - - - 1.114e-225 732.0
BYD3_k127_3469365_10 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity - - - 0.00000000000000000826 92.0
BYD3_k127_3469365_11 Periplasmic protein TonB links inner and outer membranes - - - 0.0002152 54.0
BYD3_k127_3469365_2 Glycosyl transferases group 1 - - - 2.552e-219 691.0
BYD3_k127_3469365_3 Exonuclease of the beta-lactamase fold involved in RNA processing K07577 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001531 471.0
BYD3_k127_3469365_4 protoporphyrinogen oxidase activity K01854,K07011 - 5.4.99.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001084 462.0
BYD3_k127_3469365_5 DNA ligase N terminus K10747 - 6.5.1.1,6.5.1.6,6.5.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001531 441.0
BYD3_k127_3469365_6 FAD binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002845 294.0
BYD3_k127_3469365_7 - - - - 0.000000000000000000000000000000000000000000000000000000000005926 216.0
BYD3_k127_3469365_8 depolymerase K03932 - - 0.000000000000000000000000000000000000000000000004169 195.0
BYD3_k127_3469365_9 Sulfite exporter TauE/SafE K07090 - - 0.00000000000000000000000186 106.0
BYD3_k127_3535776_0 ECF sigma factor - - - 0.00000000000000000000000000000000000000000000000000000000000001589 222.0
BYD3_k127_3535776_1 Amidase K02433 - 6.3.5.6,6.3.5.7 0.00000000000000000000000000005573 119.0
BYD3_k127_3535776_2 Cupin 2, conserved barrel domain protein K16953,K19547 - 4.4.1.3,5.3.3.19 0.00000000000000000002129 100.0
BYD3_k127_3537187_0 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001712 466.0
BYD3_k127_3537187_1 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003389 370.0
BYD3_k127_3537187_2 Sigma factor PP2C-like phosphatases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001293 290.0
BYD3_k127_3565843_0 Multicopper oxidase K22348 - 1.16.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001886 452.0
BYD3_k127_3565843_1 protein kinase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002154 406.0
BYD3_k127_3565843_10 deoxyhypusine monooxygenase activity K01661 - 4.1.3.36 0.000004268 58.0
BYD3_k127_3565843_2 Beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002813 323.0
BYD3_k127_3565843_3 SprT-like family - - - 0.000000000000000000000000000000000000000000000000008466 189.0
BYD3_k127_3565843_4 protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000005197 182.0
BYD3_k127_3565843_5 Cytochrome c7 and related cytochrome c - - - 0.00000000000000000000000001564 126.0
BYD3_k127_3565843_6 - - - - 0.000000000000007738 85.0
BYD3_k127_3565843_7 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process K03385 - 1.7.2.2 0.0000000000000133 87.0
BYD3_k127_3565843_8 - - - - 0.00000000000119 78.0
BYD3_k127_3565843_9 heat shock protein binding - - - 0.0000000019 71.0
BYD3_k127_3583129_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.0 1034.0
BYD3_k127_3583129_1 PFAM Alcohol dehydrogenase - - - 2.427e-198 625.0
BYD3_k127_3583129_10 Drug exporters of the RND superfamily K06994,K07003,K20466,K20470 GO:0005575,GO:0005576,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006869,GO:0008150,GO:0009273,GO:0009987,GO:0010876,GO:0015920,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0033036,GO:0040007,GO:0042546,GO:0044085,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0071554,GO:0071702,GO:0071766,GO:0071840,GO:0071944,GO:1901264 - 0.000000000000000000000000000000000000000000000000000000000000000000003837 250.0
BYD3_k127_3583129_11 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000004908 252.0
BYD3_k127_3583129_12 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000001237 266.0
BYD3_k127_3583129_13 Protein of unknown function (DUF541) K09797 - - 0.0000000000000000000000000000000000000000000000000000000000000000001461 239.0
BYD3_k127_3583129_14 - - - - 0.00000000000000000000000000000000000000000000000000000000001364 213.0
BYD3_k127_3583129_15 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.0000000000000000000000000000000000000000000000001095 187.0
BYD3_k127_3583129_16 - - - - 0.000000000000000000000000000000000000000000000002554 182.0
BYD3_k127_3583129_17 DnaJ molecular chaperone homology domain - - - 0.000000000000000000000000000000000000000000000624 175.0
BYD3_k127_3583129_18 DinB family - - - 0.000000000000000000000000000000000000000005954 159.0
BYD3_k127_3583129_19 lactoylglutathione lyase activity K01759 - 4.4.1.5 0.000000000000000000000000000000000000000008619 164.0
BYD3_k127_3583129_2 Belongs to the D-alanine--D-alanine ligase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001199 392.0
BYD3_k127_3583129_20 - - - - 0.00000000000000000000000000000000000000003163 153.0
BYD3_k127_3583129_21 Phosphoglycerate mutase family - - - 0.000000000000000000000000000000000001041 152.0
BYD3_k127_3583129_22 endoribonuclease L-PSP K06927,K09022 - 3.5.99.10,6.3.1.14 0.0000000000000000000000000000003512 128.0
BYD3_k127_3583129_23 Glyoxalase-like domain K05606 - 5.1.99.1 0.000000000000000000000000001512 123.0
BYD3_k127_3583129_24 Putative lumazine-binding - - - 0.000000000000000000000000002337 118.0
BYD3_k127_3583129_25 Protein of unknown function (DUF983) - - - 0.0000000000000000000000001856 117.0
BYD3_k127_3583129_26 DinB family - - - 0.000000000000000000000002542 114.0
BYD3_k127_3583129_27 - - - - 0.00000000000000000000001566 105.0
BYD3_k127_3583129_28 Transcriptional regulator K07729 - - 0.000000000000000000008716 100.0
BYD3_k127_3583129_29 - - - - 0.00000000000001578 83.0
BYD3_k127_3583129_3 Beta-lactamase class C and other penicillin binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003133 377.0
BYD3_k127_3583129_30 response to hydrogen peroxide K08985 - - 0.0000000000000174 84.0
BYD3_k127_3583129_31 - - - - 0.00000000000008247 77.0
BYD3_k127_3583129_33 - - - - 0.000000000001358 70.0
BYD3_k127_3583129_34 - - - - 0.0000000001686 70.0
BYD3_k127_3583129_35 Immunity protein 8 - - - 0.000000006051 66.0
BYD3_k127_3583129_36 - - - - 0.0001036 50.0
BYD3_k127_3583129_4 Protein kinase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005311 338.0
BYD3_k127_3583129_5 Beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003703 326.0
BYD3_k127_3583129_6 Polyketide cyclase / dehydrase and lipid transport - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006215 316.0
BYD3_k127_3583129_7 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002315 295.0
BYD3_k127_3583129_8 ribonuclease BN K07058 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003549 280.0
BYD3_k127_3583129_9 Zinc carboxypeptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003186 283.0
BYD3_k127_3607870_0 Catalyzes the NADPH-dependent reduction of LysW - aminoadipate 6-phosphate to yield LysW -aminoadipate 6- semialdehyde K05829 - - 0.0000000000000000000000000000000000000000000000000000000000000001114 235.0
BYD3_k127_3607870_1 Aminotransferase class-III K00821 - 2.6.1.11,2.6.1.17 0.0000000000000142 82.0
BYD3_k127_3607870_2 Mo-molybdopterin cofactor biosynthetic process - - - 0.00000000000003972 74.0
BYD3_k127_3650733_0 Peptidase family M1 domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004922 450.0
BYD3_k127_3650733_1 4 iron, 4 sulfur cluster binding K02572,K02573 - - 0.00000000000000000002159 97.0
BYD3_k127_3652092_0 FAD dependent oxidoreductase - - - 3.213e-198 632.0
BYD3_k127_3652092_1 Reductase C-terminal K05297 - 1.18.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006095 587.0
BYD3_k127_3652092_10 ABC-type transport system involved in multi-copper enzyme maturation permease component K01992 - - 0.000000000000000000000000000002113 132.0
BYD3_k127_3652092_11 Sel1-like repeats. K07126 - - 0.000000000000000000000000000002794 133.0
BYD3_k127_3652092_12 - - - - 0.000000000000000000000151 108.0
BYD3_k127_3652092_13 Signal Transduction Histidine Kinase - - - 0.000000000000000000002479 98.0
BYD3_k127_3652092_14 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.0000000000000001782 92.0
BYD3_k127_3652092_2 cAMP biosynthetic process K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001195 395.0
BYD3_k127_3652092_3 Serine/Threonine protein kinases, catalytic domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002958 378.0
BYD3_k127_3652092_4 abc transporter K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008716 336.0
BYD3_k127_3652092_5 phosphatidate phosphatase activity K09474,K19302 - 3.1.3.2,3.6.1.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006497 341.0
BYD3_k127_3652092_6 GTP cyclohydrolase I K01495 - 3.5.4.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006388 277.0
BYD3_k127_3652092_7 PAP2 superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000007389 237.0
BYD3_k127_3652092_8 COG2076 Membrane transporters of cations and cationic drugs K11741 - - 0.00000000000000000000000000000000000000006623 160.0
BYD3_k127_3652092_9 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000000006842 137.0
BYD3_k127_3656323_0 Protein export membrane protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001163 362.0
BYD3_k127_3656323_1 Belongs to the peptidase M50B family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002069 302.0
BYD3_k127_3656323_2 Protein export membrane protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007659 276.0
BYD3_k127_3656323_3 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.0000000000000000000000000001072 123.0
BYD3_k127_3656323_5 Protein of unknown function (DUF2892) - - - 0.00000000000000000000002565 107.0
BYD3_k127_3656323_6 DNA-binding transcription factor activity - - - 0.00000000001155 76.0
BYD3_k127_3670086_0 Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg- protoporphyrin IX K03405 - 6.6.1.1 1.984e-208 657.0
BYD3_k127_3670086_1 Transmembrane secretion effector - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001217 282.0
BYD3_k127_3670086_2 endonuclease containing a URI domain K07461 - - 0.0000000000000000000005198 100.0
BYD3_k127_3670086_3 Psort location Cytoplasmic, score K00945 - 2.7.4.25 0.0000000000001243 77.0
BYD3_k127_3671387_0 UvrD-like helicase C-terminal domain K03657 - 3.6.4.12 5.042e-224 735.0
BYD3_k127_3671387_1 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006318 581.0
BYD3_k127_3671387_10 PFAM beta-lactamase domain protein - - - 0.00000000000000000000000000000003007 134.0
BYD3_k127_3671387_11 Belongs to the multicopper oxidase YfiH RL5 family K05810 GO:0003674,GO:0005488,GO:0005507,GO:0043167,GO:0043169,GO:0046872,GO:0046914 - 0.0000000000000000000000000155 123.0
BYD3_k127_3671387_12 - - - - 0.00000000000000000004644 96.0
BYD3_k127_3671387_13 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.0000001064 58.0
BYD3_k127_3671387_14 Roadblock/LC7 domain K07131 - - 0.0000002512 58.0
BYD3_k127_3671387_2 Aminotransferase class-V - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001738 516.0
BYD3_k127_3671387_3 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000255 514.0
BYD3_k127_3671387_4 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007005 499.0
BYD3_k127_3671387_5 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 GO:0003674,GO:0003824,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016879,GO:0016884,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0050567,GO:0070681,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002768 455.0
BYD3_k127_3671387_6 Zinc dependent phospholipase C - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006878 338.0
BYD3_k127_3671387_7 Nucleotidyl transferase K00971 - 2.7.7.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002165 327.0
BYD3_k127_3671387_8 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002013 278.0
BYD3_k127_3671387_9 Sugar nucleotidyl transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001781 259.0
BYD3_k127_3731142_0 GMC oxidoreductase - - - 2.067e-282 877.0
BYD3_k127_3731142_1 Glycosyl hydrolase family 20, catalytic domain K12373 - 3.2.1.52 2.114e-206 669.0
BYD3_k127_3731142_2 Xylose isomerase-like TIM barrel K01816 - 5.3.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003015 332.0
BYD3_k127_3731142_3 Gluconate 2-dehydrogenase subunit 3 - - - 0.00000000000000000000000000000000003368 147.0
BYD3_k127_3731142_4 Helix-turn-helix domain - - - 0.00000000000000000000000000002618 129.0
BYD3_k127_3731142_5 - - - - 0.0000000000000000000000000002152 122.0
BYD3_k127_3738753_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 7.934e-266 829.0
BYD3_k127_3738753_1 Ami_3 K01448 - 3.5.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000399 282.0
BYD3_k127_3738753_2 peptidyl-tyrosine sulfation - - - 0.0000002692 64.0
BYD3_k127_3765532_0 Belongs to the ABC transporter superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001645 389.0
BYD3_k127_3765532_1 Belongs to the ABC transporter superfamily K02031 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000675 371.0
BYD3_k127_3765532_10 FtsX-like permease family K02004 - - 0.000000000000000000000000000000000000000000000000000000000001089 215.0
BYD3_k127_3765532_11 Psort location CytoplasmicMembrane, score - - - 0.00000000000000000000000000000000000000000000000000000000001121 225.0
BYD3_k127_3765532_12 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell K03282 GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006884,GO:0008150,GO:0008361,GO:0008381,GO:0009987,GO:0009992,GO:0015267,GO:0016020,GO:0016021,GO:0016043,GO:0019725,GO:0022803,GO:0022836,GO:0022857,GO:0030104,GO:0031224,GO:0032535,GO:0042592,GO:0044425,GO:0048878,GO:0051179,GO:0051234,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0071840,GO:0090066 - 0.0000000000000000000000000000000000000000000000000001223 190.0
BYD3_k127_3765532_13 Endoribonuclease L-PSP - - - 0.000000000000000000000000000000000000000000000000005946 183.0
BYD3_k127_3765532_14 NAD(P)H-binding - - - 0.000000000000000000000000000000000000000000000000304 184.0
BYD3_k127_3765532_15 Calcineurin-like phosphoesterase superfamily domain K07098 - - 0.000000000000000000000000000000000000000000000001167 185.0
BYD3_k127_3765532_16 Export-related chaperone CsaA K06878 - - 0.0000000000000000000000000000000000000000013 170.0
BYD3_k127_3765532_17 Biotin/lipoate A/B protein ligase family K03800 - 6.3.1.20 0.0000000000000000000000000000000000000001705 159.0
BYD3_k127_3765532_18 Winged helix DNA-binding domain - - - 0.000000000000000000000000000000000000004884 149.0
BYD3_k127_3765532_19 TonB dependent receptor - - - 0.00000000000000000000000000005837 130.0
BYD3_k127_3765532_2 Phenazine biosynthesis-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003875 322.0
BYD3_k127_3765532_20 Peptidase family M23 - - - 0.00000000000008479 76.0
BYD3_k127_3765532_21 - - - - 0.0000000000199 73.0
BYD3_k127_3765532_23 TonB-dependent receptor - - - 0.0003543 54.0
BYD3_k127_3765532_3 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 GO:0002094,GO:0003674,GO:0003824,GO:0004659,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006066,GO:0006629,GO:0006720,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016093,GO:0016094,GO:0016740,GO:0016765,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046165,GO:0071704,GO:1901576,GO:1901615,GO:1901617 2.5.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003125 295.0
BYD3_k127_3765532_4 D-aminopeptidase K16203 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002031 282.0
BYD3_k127_3765532_5 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002194 301.0
BYD3_k127_3765532_6 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003823 265.0
BYD3_k127_3765532_7 Belongs to the short-chain dehydrogenases reductases (SDR) family K07124 - - 0.000000000000000000000000000000000000000000000000000000000000000000004591 250.0
BYD3_k127_3765532_8 Binding-protein-dependent transport system inner membrane component K02034 - - 0.00000000000000000000000000000000000000000000000000000000000000009188 243.0
BYD3_k127_3765532_9 Binding-protein-dependent transport system inner membrane component K02033 - - 0.0000000000000000000000000000000000000000000000000000000000000001829 232.0
BYD3_k127_3806459_0 RsbT co-antagonist protein rsbRD N-terminal domain K17763 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002993 316.0
BYD3_k127_3806459_1 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000103 257.0
BYD3_k127_3806459_2 transporter antisigma-factor antagonist STAS K17762 - - 0.000000000000000000000000000000000000000000000000006874 183.0
BYD3_k127_3806459_3 PFAM ATP-binding region, ATPase domain protein K17752 - 2.7.11.1 0.000000000000000000000000000000000000000000000007781 175.0
BYD3_k127_3806459_4 Histidine kinase K13598 - 2.7.13.3 0.0000000000000000000000000000000000009744 158.0
BYD3_k127_3806459_5 Sigma factor PP2C-like phosphatases - - - 0.00000000000000000000000000006326 122.0
BYD3_k127_3806459_6 Putative lumazine-binding - - - 0.00000000000000005587 91.0
BYD3_k127_3806459_7 response regulator K07715 - - 0.0000000000001612 73.0
BYD3_k127_3806459_8 ABC-type dipeptide transport system, periplasmic component K02035 - - 0.0000008101 61.0
BYD3_k127_3902878_0 efflux transmembrane transporter activity - - - 8.934e-275 869.0
BYD3_k127_3902878_1 Tetratricopeptide repeat - - - 0.0000000000000000000000001332 117.0
BYD3_k127_3902878_2 helix_turn_helix, arabinose operon control protein - - - 0.00000000000000000009194 100.0
BYD3_k127_3954721_0 Two component, sigma54 specific, transcriptional regulator, Fis family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005484 331.0
BYD3_k127_3954721_1 Diacylglycerol kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002404 265.0
BYD3_k127_3954721_2 Alpha-tubulin suppressor and related RCC1 domain-containing proteins - - - 0.0000000000000000000000000000000000000000000161 182.0
BYD3_k127_3954721_3 Haloacid dehalogenase-like hydrolase - - - 0.00000000000000000000000000000000000000000005862 169.0
BYD3_k127_3954721_4 phosphatidate phosphatase activity K19302 - 3.6.1.27 0.00000000000000000000000000005824 128.0
BYD3_k127_3954721_5 Protein of unknown function (DUF3108) - - - 0.000000000000000007846 94.0
BYD3_k127_3954721_6 ADP-heptose-lipopolysaccharide heptosyltransferase activity - - - 0.000000008337 68.0
BYD3_k127_3954721_7 glutamine synthetase K01915 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0016787,GO:0016810,GO:0016811,GO:0044464,GO:0050001,GO:0071944 6.3.1.2 0.0000002493 52.0
BYD3_k127_3978225_0 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006021 582.0
BYD3_k127_3978225_1 DNA restriction-modification system - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006376 434.0
BYD3_k127_3978225_2 SNF2 family N-terminal domain - - - 0.0000000000000000000000000000001419 144.0
BYD3_k127_4007523_0 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 1.546e-223 722.0
BYD3_k127_4007523_1 Catalyzes the attachment of glycine to tRNA(Gly) K01880 - 6.1.1.14 1.665e-213 672.0
BYD3_k127_4007523_10 Cytochrome C biogenesis protein transmembrane region K06196 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007019 280.0
BYD3_k127_4007523_11 Histone deacetylase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000007023 272.0
BYD3_k127_4007523_12 amine dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000979 248.0
BYD3_k127_4007523_13 PFAM metal-dependent phosphohydrolase, HD sub domain - - - 0.00000000000000000000000000000000000000000000000000000000000000001059 246.0
BYD3_k127_4007523_14 Inositol monophosphatase family K01092 - 3.1.3.25 0.0000000000000000000000000000000000000000000000000000000000000002377 231.0
BYD3_k127_4007523_15 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.00000000000000000000000000000000000000000000000004452 186.0
BYD3_k127_4007523_16 Binds to the 23S rRNA K02876 - - 0.00000000000000000000000000000000000000000000003903 174.0
BYD3_k127_4007523_17 Ferric uptake regulator family K03711 - - 0.000000000000000000000000000000000000002548 156.0
BYD3_k127_4007523_19 - - - - 0.0000000000000000000001715 100.0
BYD3_k127_4007523_2 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 - 6.3.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009926 558.0
BYD3_k127_4007523_20 Zincin-like metallopeptidase - - - 0.00000000000000148 85.0
BYD3_k127_4007523_21 lyase activity - - - 0.00000000002443 77.0
BYD3_k127_4007523_22 Periplasmic or secreted lipoprotein - - - 0.0000000006465 69.0
BYD3_k127_4007523_23 - - - - 0.00000002683 62.0
BYD3_k127_4007523_3 ABC transporter transmembrane region K18889 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002109 550.0
BYD3_k127_4007523_4 PFAM LOR SDH bifunctional enzyme conserved region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003353 492.0
BYD3_k127_4007523_5 tRNA synthetases class I (W and Y) K01867 - 6.1.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006234 419.0
BYD3_k127_4007523_6 Type II/IV secretion system protein K02669 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004258 377.0
BYD3_k127_4007523_7 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain K19802 - 5.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000155 390.0
BYD3_k127_4007523_8 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 GO:0002790,GO:0003674,GO:0005048,GO:0005215,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006616,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0022857,GO:0022884,GO:0031224,GO:0031226,GO:0031522,GO:0032940,GO:0032978,GO:0032991,GO:0033036,GO:0033218,GO:0033365,GO:0034613,GO:0042277,GO:0042886,GO:0042887,GO:0043952,GO:0044425,GO:0044459,GO:0044464,GO:0045047,GO:0045184,GO:0046903,GO:0046907,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0061024,GO:0065002,GO:0070727,GO:0070972,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0071944,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:1904680 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003844 376.0
BYD3_k127_4007523_9 Metallopeptidase family M24 K01265 - 3.4.11.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008853 346.0
BYD3_k127_4009706_0 Saccharopine dehydrogenase C-terminal domain K19064 - 1.4.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008051 464.0
BYD3_k127_4009706_1 Protein kinase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000005724 213.0
BYD3_k127_4009706_2 carboxymethylenebutenolidase activity K01061 - 3.1.1.45 0.00000000000000000000000000000000000000000000000000000379 201.0
BYD3_k127_4009706_3 PFAM Bacterial regulatory proteins, tetR family - - - 0.0000000000009634 76.0
BYD3_k127_4009706_4 Tricorn protease PDZ domain K03797,K08676 - 3.4.21.102 0.00002494 55.0
BYD3_k127_4022211_0 Dihydroxyacetone kinase family K07030 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002082 338.0
BYD3_k127_4022211_1 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.000000000000000000000000000000000000000000000006952 172.0
BYD3_k127_4022211_10 Involved in the tonB-independent uptake of proteins - - - 0.00000000000004329 74.0
BYD3_k127_4022211_11 - - - - 0.00005974 55.0
BYD3_k127_4022211_2 Binds to the 23S rRNA K02939 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0030312,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0071704,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000002076 154.0
BYD3_k127_4022211_3 DinB superfamily - - - 0.00000000000000000000000000000000000007623 149.0
BYD3_k127_4022211_4 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.00000000000000000000000000000001887 136.0
BYD3_k127_4022211_5 Binds together with S18 to 16S ribosomal RNA K02990 - - 0.000000000000000000000000008933 115.0
BYD3_k127_4022211_6 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 - - 0.00000000000000000000002723 100.0
BYD3_k127_4022211_8 peptidyl-tyrosine sulfation - - - 0.000000000000006688 89.0
BYD3_k127_4022211_9 - - - - 0.00000000000001585 85.0
BYD3_k127_4032093_0 Protein kinase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002253 520.0
BYD3_k127_4032093_1 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001835 463.0
BYD3_k127_4032093_10 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000003402 96.0
BYD3_k127_4032093_11 SnoaL-like domain - - - 0.000000001237 66.0
BYD3_k127_4032093_12 ABC-2 family transporter protein K01992 - - 0.000000004842 66.0
BYD3_k127_4032093_2 TIGRFAM asparagine synthase (glutamine-hydrolyzing) K01953 - 6.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003063 451.0
BYD3_k127_4032093_3 decarboxylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006708 430.0
BYD3_k127_4032093_4 PFAM ABC transporter related K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006957 268.0
BYD3_k127_4032093_5 - - - - 0.000000000000000000000000000000000000000000000001879 187.0
BYD3_k127_4032093_6 transferase activity, transferring glycosyl groups - - - 0.000000000000000000000000000000000000000000000002717 187.0
BYD3_k127_4032093_7 SnoaL-like domain - - - 0.00000000000000000000000000000000001602 139.0
BYD3_k127_4032093_8 Thioredoxin-like - - - 0.00000000000000000000000000000007589 132.0
BYD3_k127_4032093_9 Domain of unknown function (DUF4440) - - - 0.000000000000000000000001941 106.0
BYD3_k127_4133066_0 Acyl-CoA dehydrogenase, N-terminal domain - - - 1.333e-206 670.0
BYD3_k127_4133066_1 transcriptional regulator - - - 0.00000000000000000000000000000002206 134.0
BYD3_k127_414577_0 lysine biosynthetic process via aminoadipic acid - - - 9.535e-251 801.0
BYD3_k127_414577_1 Thiolase, C-terminal domain K00626,K07508 - 2.3.1.16,2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003168 453.0
BYD3_k127_414577_10 Conserved TM helix - - - 0.00000000000000000000000000000000000000000000000003794 197.0
BYD3_k127_414577_11 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03469 - 3.1.26.4 0.0000000000000000000000000000000000000000000000001219 184.0
BYD3_k127_414577_12 - - - - 0.000000000000000000000000000299 123.0
BYD3_k127_414577_13 - - - - 0.0000000000000000000000001512 120.0
BYD3_k127_414577_14 Belongs to the NiCoT transporter (TC 2.A.52) family K07241 - - 0.0000000000000000000000004407 113.0
BYD3_k127_414577_15 Involved in the TonB-independent uptake of proteins K03641 GO:0003674,GO:0005215,GO:0006810,GO:0008150,GO:0019534,GO:0022857,GO:0051179,GO:0051234,GO:0055085,GO:1901998 - 0.000000000000000000000001632 121.0
BYD3_k127_414577_17 - - - - 0.0000000000000000007434 100.0
BYD3_k127_414577_18 amine dehydrogenase activity - - - 0.000000000000000003336 98.0
BYD3_k127_414577_19 Calcium/calmodulin dependent protein kinase II association domain - - - 0.0000000000000004684 85.0
BYD3_k127_414577_2 Zinc-binding dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001179 380.0
BYD3_k127_414577_20 - - - - 0.00000000003329 65.0
BYD3_k127_414577_21 PFAM NHL repeat containing protein - - - 0.0000001679 63.0
BYD3_k127_414577_22 - - - - 0.000005756 52.0
BYD3_k127_414577_24 amine dehydrogenase activity - - - 0.0001517 53.0
BYD3_k127_414577_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007974 379.0
BYD3_k127_414577_4 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001131 308.0
BYD3_k127_414577_5 prohibitin homologues - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001753 295.0
BYD3_k127_414577_6 HEAT repeats - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001912 293.0
BYD3_k127_414577_7 Sigma-70 region 2 K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000004933 235.0
BYD3_k127_414577_8 HEAT repeats - - - 0.0000000000000000000000000000000000000000000000000000000000008073 229.0
BYD3_k127_414577_9 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000006256 210.0
BYD3_k127_4161357_0 COG0457 FOG TPR repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004299 509.0
BYD3_k127_4161357_1 COG1226 Kef-type K transport systems - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007919 444.0
BYD3_k127_4161357_2 membrane - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001828 287.0
BYD3_k127_4161357_3 Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine K01733 - 4.2.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001285 279.0
BYD3_k127_4161357_4 protein kinase activity K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000004926 282.0
BYD3_k127_4161357_5 DNA-templated transcription, initiation K02405 - - 0.00000000000000000000000000000000000000000000000000006725 193.0
BYD3_k127_4161357_6 PFAM Rhomboid family - - - 0.0000000000000000000000000000007167 132.0
BYD3_k127_4169408_0 Pyridoxal-phosphate dependent enzyme K01738 - 2.5.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002416 576.0
BYD3_k127_4169408_1 Amidase K01426 - 3.5.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006112 577.0
BYD3_k127_4169408_2 protein kinase activity K12132 - 2.7.11.1 0.0000000000000000001826 93.0
BYD3_k127_4176362_0 FAD linked oxidase domain protein - - - 3.39e-247 773.0
BYD3_k127_4176362_1 Peptidase family M28 K06016 - 3.5.1.6,3.5.1.87 0.00000000000000000000000000000000000006528 144.0
BYD3_k127_4225761_0 Peptidase family M28 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000738 528.0
BYD3_k127_4225761_1 Serine/Threonine protein kinases, catalytic domain K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008436 385.0
BYD3_k127_4225761_2 Protein kinase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002906 375.0
BYD3_k127_4225761_3 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002572 323.0
BYD3_k127_4225761_4 Transglycosylase SLT domain K08307 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002887 302.0
BYD3_k127_4225761_5 Uncharacterized protein conserved in bacteria (DUF2064) K09931 - - 0.00000000005832 71.0
BYD3_k127_4225761_6 - - - - 0.000000000155 67.0
BYD3_k127_4225761_7 COG1629 Outer membrane receptor proteins, mostly Fe transport K02014 - - 0.0001446 55.0
BYD3_k127_4278567_0 response regulator receiver - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004178 430.0
BYD3_k127_4278567_1 PFAM magnesium chelatase ChlI subunit K07391 - - 0.0000000000000000000000000000000000000000000000000000000000000000002292 237.0
BYD3_k127_43426_0 COG0433 Predicted ATPase K06915 - - 7.809e-253 796.0
BYD3_k127_43426_1 Male sterility protein K12454 - 5.1.3.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001015 383.0
BYD3_k127_43426_2 PFAM Aminotransferase class I and II K00812 - 2.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003475 286.0
BYD3_k127_43426_3 DbpA RNA binding domain K05592 - 3.6.4.13 0.00000000000000000000000000000000000006399 161.0
BYD3_k127_43426_4 COGs COG2380 conserved - - - 0.000000000000000000000000004735 125.0
BYD3_k127_43426_6 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.0000000000000000000002184 100.0
BYD3_k127_4425066_0 Transglycosylase K05366 - 2.4.1.129,3.4.16.4 6.001e-221 708.0
BYD3_k127_4425066_1 PglZ domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001251 615.0
BYD3_k127_4425066_10 Aminotransferase class-V - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002982 319.0
BYD3_k127_4425066_11 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 - 2.1.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003726 308.0
BYD3_k127_4425066_12 4Fe-4S single cluster domain K07001 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001527 307.0
BYD3_k127_4425066_13 Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S K03149 GO:0003674,GO:0003824,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.8.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002454 299.0
BYD3_k127_4425066_14 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA K03500 - 2.1.1.176 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000167 301.0
BYD3_k127_4425066_15 HNH nucleases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007637 279.0
BYD3_k127_4425066_16 Amidohydrolase family K12960,K20810 - 3.5.4.28,3.5.4.31,3.5.4.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000002453 281.0
BYD3_k127_4425066_17 Ribulose-phosphate 3 epimerase family K01783 - 5.1.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000002716 265.0
BYD3_k127_4425066_18 Cytochrome c K07243 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000531 257.0
BYD3_k127_4425066_19 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.0000000000000000000000000000000000000000000000000000000000000009313 229.0
BYD3_k127_4425066_2 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 GO:0003674,GO:0003824,GO:0004812,GO:0004831,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016875,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001937 514.0
BYD3_k127_4425066_20 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 - 3.1.22.4 0.0000000000000000000000000000000000000000000003464 175.0
BYD3_k127_4425066_21 Glycosyl transferases group 1 K13668 - 2.4.1.346 0.0000000000000000000000000000000000000000000004532 181.0
BYD3_k127_4425066_22 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.0000000000000000000000000000000000000000006467 169.0
BYD3_k127_4425066_23 Glutathione peroxidase - - - 0.00000000000000000000000000000000000000001151 160.0
BYD3_k127_4425066_24 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.00000000000000000000000000000000000000009282 165.0
BYD3_k127_4425066_25 - - - - 0.000000000000000000000000000007712 132.0
BYD3_k127_4425066_26 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 - 2.5.1.3 0.0000000000000000000000000002724 124.0
BYD3_k127_4425066_27 Iron permease FTR1 family K07243 - - 0.000000000000000000000006332 111.0
BYD3_k127_4425066_28 Thiamine biosynthesis K03154 - - 0.0000000000002496 78.0
BYD3_k127_4425066_29 PASTA K08884,K12132 GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010565,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018107,GO:0018193,GO:0018210,GO:0019216,GO:0019217,GO:0019222,GO:0019538,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0036211,GO:0042304,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0045717,GO:0045833,GO:0045922,GO:0046777,GO:0046890,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051055,GO:0062012,GO:0062014,GO:0065007,GO:0071704,GO:0071944,GO:0080090,GO:0140096,GO:1901564 2.7.11.1 0.0000000001942 73.0
BYD3_k127_4425066_3 Domain of unknown function DUF87 K06915 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002528 531.0
BYD3_k127_4425066_30 Preprotein translocase subunit (YajC) K03210 - - 0.0000000004012 70.0
BYD3_k127_4425066_31 VanZ like family - - - 0.00003751 56.0
BYD3_k127_4425066_4 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006 463.0
BYD3_k127_4425066_5 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003539 456.0
BYD3_k127_4425066_6 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003822 345.0
BYD3_k127_4425066_7 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 - 2.3.1.234 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003801 343.0
BYD3_k127_4425066_8 N-terminal TM domain of oligopeptide transport permease C K02034,K15582 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004354 322.0
BYD3_k127_4425066_9 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006051 318.0
BYD3_k127_4529269_0 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 3.667e-242 754.0
BYD3_k127_4529269_1 alanine symporter K03310 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004702 594.0
BYD3_k127_4529269_10 membrane - - - 0.0000007557 60.0
BYD3_k127_4529269_2 PFAM Amino acid permease K03294 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002149 565.0
BYD3_k127_4529269_3 neurotransmitter:sodium symporter activity K03308 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000535 546.0
BYD3_k127_4529269_4 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000248 393.0
BYD3_k127_4529269_5 Polysaccharide biosynthesis C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008323 354.0
BYD3_k127_4529269_6 DHH family K06881 - 3.1.13.3,3.1.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002292 299.0
BYD3_k127_4529269_7 S-adenosyl-l-methionine hydroxide adenosyltransferase K22205 - - 0.000000000000000000000000000000000000000000000000000000000000000001026 236.0
BYD3_k127_4529269_8 Domain of unknown function (DUF4126) - - - 0.00000000000000000000000000000000000000000000008591 175.0
BYD3_k127_4529269_9 NifU domain protein - - - 0.0000000000002669 75.0
BYD3_k127_4567559_0 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity K07456 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001705 546.0
BYD3_k127_4567559_1 DHH family K07462 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005969 512.0
BYD3_k127_4567559_10 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.00000000000000000000000000000000000000000000000000000000000000001176 234.0
BYD3_k127_4567559_11 DNA protecting protein DprA K04096 - - 0.0000000000000000000000000000000000000000000000000000000009218 214.0
BYD3_k127_4567559_12 Conserved hypothetical protein 95 K08316 - 2.1.1.171 0.00000000000000000000000000000000000000000000000000005111 201.0
BYD3_k127_4567559_13 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.0000000000000000000000000000000000000000000000000001741 200.0
BYD3_k127_4567559_14 Galactose oxidase, central domain - - - 0.0000000000000000000000000000000000000000334 170.0
BYD3_k127_4567559_15 Yqey-like protein K09117 - - 0.00000000000000000000000000000000000004293 148.0
BYD3_k127_4567559_16 HIT domain K02503 - - 0.0000000000000000000000000000000000005201 147.0
BYD3_k127_4567559_17 STAS domain K04749 - - 0.0000000000000000000000000000000000005831 143.0
BYD3_k127_4567559_18 Ribosomal protein L11 methyltransferase K02687 - - 0.00000000000000000000000000000001299 141.0
BYD3_k127_4567559_19 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.0000000000000000000000000125 118.0
BYD3_k127_4567559_2 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002482 455.0
BYD3_k127_4567559_3 Involved in the biosynthesis of porphyrin-containing compound - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001153 400.0
BYD3_k127_4567559_4 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003054 372.0
BYD3_k127_4567559_5 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003608 330.0
BYD3_k127_4567559_6 Phosphate acetyl/butaryl transferase K00625 - 2.3.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000862 317.0
BYD3_k127_4567559_7 Sigma factor PP2C-like phosphatases K07315 - 3.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000042 296.0
BYD3_k127_4567559_8 Arginine deiminase K01478 - 3.5.3.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001121 285.0
BYD3_k127_4567559_9 Modulates transcription in response to changes in cellular NADH NAD( ) redox state K01926 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002491 243.0
BYD3_k127_4584919_0 protein kinase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002182 361.0
BYD3_k127_4584919_1 protein kinase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000005757 242.0
BYD3_k127_4606473_0 Formate dehydrogenase alpha subunit K00123,K05299 - 1.17.1.10,1.17.1.9 5.286e-246 794.0
BYD3_k127_4606473_1 Beta-eliminating lyase K00639 - 2.3.1.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000023 554.0
BYD3_k127_4606473_2 Peptidase S46 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003564 535.0
BYD3_k127_4606473_3 Zinc-binding dehydrogenase K00060 - 1.1.1.103 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000104 394.0
BYD3_k127_4606473_4 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002863 292.0
BYD3_k127_4606473_5 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.0000000000000000000000000000000000000000000000000000002811 210.0
BYD3_k127_4606473_6 Methylpurine-DNA glycosylase (MPG) K03652 - 3.2.2.21 0.00000000000000000000000000000000000000000000000000889 188.0
BYD3_k127_4606473_7 Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC) - - - 0.00000000000000000000001926 112.0
BYD3_k127_4606473_8 - - - - 0.0000000000000000000006804 113.0
BYD3_k127_4606473_9 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.000000000008711 66.0
BYD3_k127_4622985_0 Surface antigen K07277 - - 1.056e-211 683.0
BYD3_k127_4622985_1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 1.225e-206 674.0
BYD3_k127_4622985_10 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 - 2.1.1.177 0.000000000000000000000000001198 117.0
BYD3_k127_4622985_11 Outer membrane protein (OmpH-like) K06142 - - 0.0000000000000002259 91.0
BYD3_k127_4622985_12 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.0000003305 63.0
BYD3_k127_4622985_13 Tetratricopeptide repeat - - - 0.0007307 51.0
BYD3_k127_4622985_2 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase K00261 - 1.4.1.3 1.706e-206 651.0
BYD3_k127_4622985_3 Clp amino terminal domain, pathogenicity island component K03696 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000118 438.0
BYD3_k127_4622985_4 Pyridoxal-phosphate dependent enzyme K01733 - 4.2.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005872 399.0
BYD3_k127_4622985_5 Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2 ), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor- dependent enzymes K06898,K09121 - 4.99.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000315 264.0
BYD3_k127_4622985_6 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K16363 - 3.5.1.108,4.2.1.59 0.0000000000000000000000000000000000000000000000000000000007039 205.0
BYD3_k127_4622985_7 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.0000000000000000000000000000000000000000000000000000008585 214.0
BYD3_k127_4622985_8 Bacillithiol biosynthesis BshC K22136 - - 0.00000000000000000000000000000000000000000000000000001458 208.0
BYD3_k127_4622985_9 methyltransferase activity - - - 0.000000000000000000000000000000000000002783 161.0
BYD3_k127_4690881_0 Isocitrate/isopropylmalate dehydrogenase K00031 - 1.1.1.42 1.178e-202 645.0
BYD3_k127_4690881_1 NeuB family K03856 - 2.5.1.54 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004207 394.0
BYD3_k127_4690881_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000204 329.0
BYD3_k127_4690881_4 lytic transglycosylase activity K08309 GO:0000270,GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005623,GO:0006022,GO:0006026,GO:0006027,GO:0006807,GO:0008150,GO:0008152,GO:0008932,GO:0008933,GO:0009056,GO:0009057,GO:0009253,GO:0009274,GO:0016740,GO:0016757,GO:0030203,GO:0030288,GO:0030312,GO:0030313,GO:0031975,GO:0042597,GO:0043170,GO:0044464,GO:0061783,GO:0071704,GO:0071944,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575 - 0.000000000000000000000000000000000000000000009014 186.0
BYD3_k127_4690881_5 S4 RNA-binding domain K04762 - - 0.00000000000000000000000000000000005734 138.0
BYD3_k127_4726351_0 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K00382 - 1.8.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002532 614.0
BYD3_k127_4726351_1 POT family K03305 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003613 494.0
BYD3_k127_4726351_10 Oxidoreductase molybdopterin binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000005161 256.0
BYD3_k127_4726351_11 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 - 2.3.1.181 0.000000000000000000000000000000000000000000000000000000000000000002142 241.0
BYD3_k127_4726351_12 domain, Protein K01179,K07260,K13735 - 3.2.1.4,3.4.17.14 0.0000000000000000000000000000000000000000000000000000000000000009127 238.0
BYD3_k127_4726351_13 ICC-like phosphoesterases - - - 0.000000000000000000000000000000000000000000000000000000000000004522 222.0
BYD3_k127_4726351_14 Glycosyl transferase family 2 K08301 - - 0.000000000000000000000000000000000000000000000000000000000517 210.0
BYD3_k127_4726351_15 Redoxin - - - 0.0000000000000000000000000000000000000000000000000000001218 211.0
BYD3_k127_4726351_16 - - - - 0.000000000000000000000000000000000000000000000000000342 194.0
BYD3_k127_4726351_17 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - 0.000000000000000000000000000000000000000003419 171.0
BYD3_k127_4726351_18 FAD dependent oxidoreductase K03153 - 1.4.3.19 0.00000000000000000000000000002108 123.0
BYD3_k127_4726351_19 FAD dependent oxidoreductase K00285,K03153 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0016491,GO:0016638,GO:0016641,GO:0017144,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0036094,GO:0042364,GO:0042723,GO:0042724,GO:0043167,GO:0043168,GO:0043436,GO:0043799,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0055114,GO:0071704,GO:0071949,GO:0072527,GO:0072528,GO:0097159,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 1.4.3.19,1.4.5.1 0.000000000000000000000000007881 117.0
BYD3_k127_4726351_2 Transketolase, pyrimidine binding domain K00162 - 1.2.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001234 477.0
BYD3_k127_4726351_20 - - - - 0.00000000000000002375 89.0
BYD3_k127_4726351_21 Protein of unknown function (DUF1684) K09164 - - 0.0000000000007531 81.0
BYD3_k127_4726351_3 PFAM peptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003121 441.0
BYD3_k127_4726351_4 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00627 - 2.3.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007822 431.0
BYD3_k127_4726351_5 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001116 396.0
BYD3_k127_4726351_6 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00161 - 1.2.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002965 386.0
BYD3_k127_4726351_7 histidine kinase A domain protein K02482 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002021 314.0
BYD3_k127_4726351_8 Cytochrome C oxidase, cbb3-type, subunit III K19713 - 1.8.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000001366 260.0
BYD3_k127_4726351_9 Putative aminopeptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000006714 258.0
BYD3_k127_4835283_0 abc transporter atp-binding protein K06147 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007508 401.0
BYD3_k127_4835283_1 Belongs to the peptidase S41A family K06399 - 3.4.21.116 0.0000000000000000000000000000000000000000000623 179.0
BYD3_k127_4895254_0 Probable RNA and SrmB- binding site of polymerase A K00974 - 2.7.7.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002279 444.0
BYD3_k127_4895254_1 asparaginase activity K01424 - 3.5.1.1 0.0000000000000000000000000000000000000000000000000000000000000004184 224.0
BYD3_k127_4895254_2 - - - - 0.0000000000000000000000000000000000000000000007983 171.0
BYD3_k127_4895254_3 MgsA AAA+ ATPase C terminal K07478 - - 0.000000000000000000000001814 105.0
BYD3_k127_4904661_0 Circadian clock protein kaic K08482 - - 0.0000000000000000000000000000000000000004288 156.0
BYD3_k127_4904661_1 GAF domain - - - 0.00000000000000000000000000000000000006721 159.0
BYD3_k127_4922732_0 Protein of unknown function, DUF255 K06888 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003344 575.0
BYD3_k127_4922732_1 lysine biosynthetic process via aminoadipic acid - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003997 525.0
BYD3_k127_4922732_10 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001082 256.0
BYD3_k127_4922732_11 Serine aminopeptidase, S33 K01259 - 3.4.11.5 0.00000000000000000000000000000000000000000000000000000000000000000000002884 254.0
BYD3_k127_4922732_12 CyaE is necessary for transport of calmodulin-sensitive adenylate cyclase-hemolysin (cyclolysin) K12340 - - 0.000000000000000000000000000000000000000000000000000000000000000006181 242.0
BYD3_k127_4922732_13 Peptidyl-prolyl cis-trans isomerase K03768 - 5.2.1.8 0.000000000000000000000000000000000000000000000000002336 198.0
BYD3_k127_4922732_14 ATPases associated with a variety of cellular activities K16786,K16787 - - 0.000000000000000000000000000000000000006587 164.0
BYD3_k127_4922732_15 ECF sigma factor K03088 - - 0.00000000000000000000000000007666 132.0
BYD3_k127_4922732_16 GAF domain-containing protein K08968 - 1.8.4.14 0.0000000000000000000003764 108.0
BYD3_k127_4922732_17 Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates K16923 - - 0.000000000000000000001758 108.0
BYD3_k127_4922732_18 Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes - - - 0.00000000000000000007727 91.0
BYD3_k127_4922732_2 DNA polymerase alpha chain like domain K02347 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004856 466.0
BYD3_k127_4922732_20 ATPases associated with a variety of cellular activities K16785,K16786,K16787 - - 0.0000000000000006804 89.0
BYD3_k127_4922732_21 Cell wall-active antibiotics response 4TMS YvqF - - - 0.00000000000002471 83.0
BYD3_k127_4922732_22 Cobalt transport protein K16785 - - 0.0000000003247 72.0
BYD3_k127_4922732_23 - - - - 0.0006424 50.0
BYD3_k127_4922732_3 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003388 432.0
BYD3_k127_4922732_4 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002813 410.0
BYD3_k127_4922732_5 membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001115 347.0
BYD3_k127_4922732_6 Peptidase family M28 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006458 331.0
BYD3_k127_4922732_7 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003736 315.0
BYD3_k127_4922732_8 PLD-like domain K06131 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008335 324.0
BYD3_k127_4922732_9 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005,K13888 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000009132 303.0
BYD3_k127_492890_0 Beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003799 305.0
BYD3_k127_492890_1 Cardiolipin synthetase K06131 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002214 308.0
BYD3_k127_492890_2 - - - - 0.0000000000000000000000000000000000000000001967 183.0
BYD3_k127_492890_3 Protein of unknown function (DUF3037) - - - 0.0000000000000000001393 89.0
BYD3_k127_4946471_0 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K01007,K08483 - 2.7.3.9,2.7.9.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001955 388.0
BYD3_k127_4946471_1 PTS HPr component phosphorylation site K11189 - - 0.000000000000000000001602 96.0
BYD3_k127_4946471_2 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 GO:0003674,GO:0003824,GO:0004478,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016740,GO:0016765,GO:0044424,GO:0044444,GO:0044464 2.5.1.6 0.00000001305 58.0
BYD3_k127_4963432_0 Glucose / Sorbosone dehydrogenase K21430 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001 373.0
BYD3_k127_4963432_1 Leucyl aminopeptidase K19701 - 3.4.11.10,3.4.11.6 0.0000000000000000002845 104.0
BYD3_k127_4963432_2 - - - - 0.0000000000002341 76.0
BYD3_k127_4963432_3 Domain of unknown function (DU1801) - - - 0.000000002524 57.0
BYD3_k127_4971113_0 PFAM asparagine synthase K01953 - 6.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008051 492.0
BYD3_k127_4971113_1 Transmembrane exosortase (Exosortase_EpsH) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009421 333.0
BYD3_k127_4971113_11 - - - - 0.0000000835 63.0
BYD3_k127_4971113_12 - - - - 0.000005072 56.0
BYD3_k127_4971113_2 Bacterial sugar transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005602 277.0
BYD3_k127_4971113_3 Protein of unknown function (DUF3485) - - - 0.0000000000000000000000000000000000000000000000000000000000000000005264 235.0
BYD3_k127_4971113_4 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000007088 184.0
BYD3_k127_4971113_5 polysaccharide export - - - 0.00000000000000000000000000006622 126.0
BYD3_k127_4971113_6 COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain - - - 0.0000000000000000000000007885 113.0
BYD3_k127_4971113_7 O-Antigen ligase - - - 0.0000000000003621 82.0
BYD3_k127_4971113_8 Domain of unknown function (DUF4114) - - - 0.00000000002027 72.0
BYD3_k127_4995346_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 3.042e-306 973.0
BYD3_k127_4995346_1 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274,K15408 - 1.9.3.1 4.322e-223 719.0
BYD3_k127_4995346_10 Helix-turn-helix domain - - - 0.000000000000000000000000000000000000000000005669 169.0
BYD3_k127_4995346_11 Cytochrome c - - - 0.000000000000000000000000000001166 132.0
BYD3_k127_4995346_12 Prephenate dehydratase K04518,K14170 - 4.2.1.51,5.4.99.5 0.000000000000000000000000004665 124.0
BYD3_k127_4995346_13 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.00000000000000000000000002619 123.0
BYD3_k127_4995346_14 PFAM Chorismate mutase of the AroH class K06208 - 5.4.99.5 0.0000000000000000000000005546 118.0
BYD3_k127_4995346_15 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.0000000000000000000000007308 107.0
BYD3_k127_4995346_16 Pfam Activator of Hsp90 ATPase - - - 0.0000000000000004881 91.0
BYD3_k127_4995346_17 Protein of unknown function (DUF1579) - - - 0.00000000000001606 81.0
BYD3_k127_4995346_18 NeuB family K03856 - 2.5.1.54 0.00000000002511 64.0
BYD3_k127_4995346_2 DbpA RNA binding domain K05592,K11927 GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006807,GO:0008026,GO:0008150,GO:0008152,GO:0008186,GO:0009987,GO:0010501,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030312,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070035,GO:0071704,GO:0071944,GO:0090304,GO:0140098,GO:1901360 3.6.4.13 1.242e-211 674.0
BYD3_k127_4995346_3 glucose-6-phosphate dehydrogenase activity K00036 - 1.1.1.363,1.1.1.49 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001542 553.0
BYD3_k127_4995346_4 Sodium:sulfate symporter transmembrane region K14445 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001781 467.0
BYD3_k127_4995346_5 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001975 462.0
BYD3_k127_4995346_6 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275,K17223 GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006119,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016020,GO:0016310,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0034641,GO:0042773,GO:0044237,GO:0044238,GO:0044281,GO:0044464,GO:0045333,GO:0046034,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:0071944,GO:0072521,GO:1901135,GO:1901360,GO:1901564 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003983 286.0
BYD3_k127_4995346_7 6-phosphogluconate dehydrogenase, C-terminal domain K00033 - 1.1.1.343,1.1.1.44 0.000000000000000000000000000000000000000000000000000000000000000000000000001336 268.0
BYD3_k127_4995346_8 carboxylic ester hydrolase activity - - - 0.000000000000000000000000000000000000000000000000000000000000005055 232.0
BYD3_k127_4995346_9 glucosamine-6-phosphate deaminase activity K01057,K02564 - 3.1.1.31,3.5.99.6 0.0000000000000000000000000000000000000000000000000001579 198.0
BYD3_k127_5029119_0 Glycosyl transferase 4-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000001417 252.0
BYD3_k127_5029119_1 Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate K04040,K20616 - 2.5.1.133,2.5.1.62 0.00000000000000000000000000000000000000000000000000000000000000000002034 250.0
BYD3_k127_5029119_2 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.000000000000000000000000000000000000000000000000000000000007419 217.0
BYD3_k127_5075342_0 Peptidase family M1 domain - - - 0.0 1302.0
BYD3_k127_5075342_1 Protein kinase domain K12132 - 2.7.11.1 4.395e-303 943.0
BYD3_k127_5075342_2 ABC transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007132 453.0
BYD3_k127_5075342_3 epimerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000008506 287.0
BYD3_k127_5090373_0 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 - - 3.803e-222 694.0
BYD3_k127_5090373_1 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005225 453.0
BYD3_k127_5090373_2 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007111 426.0
BYD3_k127_5090373_3 O-acyltransferase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001527 366.0
BYD3_k127_5090373_4 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001496 362.0
BYD3_k127_5090373_5 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005335 275.0
BYD3_k127_5090373_6 histidine kinase A domain protein K02482 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000002804 274.0
BYD3_k127_5090373_7 Necessary for normal cell division and for the maintenance of normal septation K03978 - - 0.000000000000000000000000000000000000002782 152.0
BYD3_k127_5090373_8 - - - - 0.000000000007446 78.0
BYD3_k127_5090373_9 His Kinase A (phosphoacceptor) domain - - - 0.0000000004318 65.0
BYD3_k127_511820_0 Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis K01042 GO:0003674,GO:0003824,GO:0004125,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009059,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016070,GO:0016259,GO:0016260,GO:0016740,GO:0016785,GO:0018130,GO:0019438,GO:0019752,GO:0019842,GO:0030170,GO:0032774,GO:0034641,GO:0034654,GO:0034660,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0048037,GO:0050662,GO:0070279,GO:0071704,GO:0090304,GO:0097056,GO:0097159,GO:0140098,GO:0140101,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.9.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004351 399.0
BYD3_k127_511820_1 HAD-hyrolase-like K03273 - 3.1.3.82,3.1.3.83 0.00000000000000000000000000000000000006764 163.0
BYD3_k127_511820_2 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 GO:0003674,GO:0003824,GO:0004644,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006974,GO:0008150,GO:0009987,GO:0016740,GO:0016741,GO:0016742,GO:0033554,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051716 2.1.2.2 0.000000003847 60.0
BYD3_k127_5186801_0 peptidase activity K06015 - 3.5.1.81 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002574 424.0
BYD3_k127_5186801_1 Dipeptidyl peptidase IV (DPP IV) N-terminal region - - - 0.000000000000000000000000000004714 137.0
BYD3_k127_5234262_0 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 - 1.1.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000654 392.0
BYD3_k127_5234262_1 Histidine biosynthesis protein K01814 - 5.3.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000004912 270.0
BYD3_k127_5234262_2 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000001585 269.0
BYD3_k127_5234262_3 Imidazoleglycerol-phosphate dehydratase K01693 - 4.2.1.19 0.0000000000000000000000000000000000000000000000000000000000003953 226.0
BYD3_k127_5234262_4 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.000000000000000000000000000000000000000000000000000000000000415 228.0
BYD3_k127_5234262_5 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K01663,K02500 - - 0.00000000000000000000000001628 121.0
BYD3_k127_5311797_0 Fumarylacetoacetate (FAA) hydrolase K01555 - 3.7.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001058 601.0
BYD3_k127_5311797_1 protein containing a von Willebrand factor type A (vWA) domain K07114 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000157 599.0
BYD3_k127_5311797_10 Ferredoxin - - - 0.000000000000000000000000000000000000000004015 167.0
BYD3_k127_5311797_11 DinB family - - - 0.00000000000000000000000000001333 129.0
BYD3_k127_5311797_12 His Kinase A (phosphoacceptor) domain - - - 0.0000000003702 67.0
BYD3_k127_5311797_2 Protein kinase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001744 518.0
BYD3_k127_5311797_3 Nitronate monooxygenase K00459,K02371 - 1.13.12.16,1.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005662 314.0
BYD3_k127_5311797_4 Beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002415 311.0
BYD3_k127_5311797_5 Domain of unknown function (DUF4105) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001046 273.0
BYD3_k127_5311797_6 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003263 262.0
BYD3_k127_5311797_7 histidyl-tRNA synthetase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002071 255.0
BYD3_k127_5311797_8 Cytidine monophosphokinase K00876 GO:0003674,GO:0003824,GO:0004849,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006206,GO:0006213,GO:0006220,GO:0006221,GO:0006222,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008655,GO:0009058,GO:0009112,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009173,GO:0009174,GO:0009218,GO:0009220,GO:0009224,GO:0009259,GO:0009260,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0043094,GO:0043097,GO:0043174,GO:0043771,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046035,GO:0046049,GO:0046131,GO:0046132,GO:0046134,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.7.1.48 0.0000000000000000000000000000000000000000000000000000000000000000004754 252.0
BYD3_k127_5311797_9 Helix-turn-helix domain - - - 0.0000000000000000000000000000000000000000000000000002666 196.0
BYD3_k127_5336730_0 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770 - 4.6.1.12 0.0000000000000000000000000000000000000000000000000000007586 199.0
BYD3_k127_5336730_1 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.000000000000000000000000000000000000000004646 158.0
BYD3_k127_5336730_2 Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2) K11784 - 1.21.98.1 0.0000000000000000003319 89.0
BYD3_k127_5336730_3 SNARE associated Golgi protein - - - 0.0004192 48.0
BYD3_k127_5417447_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.0 1047.0
BYD3_k127_5417447_1 Transport of potassium into the cell K03549 GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0008150,GO:0008324,GO:0009987,GO:0015075,GO:0015077,GO:0015079,GO:0015318,GO:0015672,GO:0016020,GO:0022857,GO:0022890,GO:0030001,GO:0034220,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0071804,GO:0071805,GO:0098655,GO:0098660,GO:0098662 - 3.43e-258 815.0
BYD3_k127_5417447_10 Cytochrome C assembly protein K02195 - - 0.000000000000000000000000000000000000000000000000000000000000000008683 232.0
BYD3_k127_5417447_11 Belongs to the MsrB Met sulfoxide reductase family K07305 - 1.8.4.12 0.00000000000000000000000000000000000000000000000000000004084 199.0
BYD3_k127_5417447_12 CcmB protein K02194 - - 0.000000000000000000000000000000000000000000000000002484 191.0
BYD3_k127_5417447_13 ABC transporter K02193 - 3.6.3.41 0.00000000000000000000000000000000000000000000001457 179.0
BYD3_k127_5417447_14 DSBA-like thioredoxin domain - - - 0.00000000000000000000000000000000000000000001206 170.0
BYD3_k127_5417447_15 OsmC-like protein K07397 - - 0.000000000000000000003224 105.0
BYD3_k127_5417447_16 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995,K08744 - 2.7.8.41,2.7.8.5 0.00000000000000000001838 99.0
BYD3_k127_5417447_17 Transcriptional regulatory protein, C terminal K07669,K07672 GO:0000160,GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006355,GO:0007154,GO:0007165,GO:0008150,GO:0009268,GO:0009628,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010446,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0016020,GO:0019219,GO:0019222,GO:0023052,GO:0030312,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0035556,GO:0043254,GO:0044087,GO:0044464,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0051716,GO:0060255,GO:0065007,GO:0071944,GO:0080090,GO:0090034,GO:0097159,GO:1901363,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:2000112,GO:2000113,GO:2001141 - 0.00000000000000000003763 97.0
BYD3_k127_5417447_19 - - - - 0.00000000000000003157 85.0
BYD3_k127_5417447_2 Aldehyde dehydrogenase family K00294 - 1.2.1.88 6.555e-231 726.0
BYD3_k127_5417447_20 VKc - - - 0.00000000000003012 79.0
BYD3_k127_5417447_22 STAS domain - - - 0.0000139 52.0
BYD3_k127_5417447_3 Insulinase (Peptidase family M16) K07263 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001255 637.0
BYD3_k127_5417447_4 Aldehyde dehydrogenase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002433 492.0
BYD3_k127_5417447_5 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001128 444.0
BYD3_k127_5417447_6 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003788 305.0
BYD3_k127_5417447_7 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K02010,K02052 - 3.6.3.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006224 277.0
BYD3_k127_5417447_8 AAA domain, putative AbiEii toxin, Type IV TA system K01990,K19340 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001059 264.0
BYD3_k127_5417447_9 Binding-protein-dependent transport system inner membrane component K02018 - - 0.0000000000000000000000000000000000000000000000000000000000000000007953 235.0
BYD3_k127_5461574_0 nuclear chromosome segregation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001049 526.0
BYD3_k127_5461574_1 Aerotolerance regulator N-terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009752 359.0
BYD3_k127_5461574_2 Protein of unknown function DUF58 - - - 0.0000598 46.0
BYD3_k127_5466481_0 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source K01916 - 6.3.1.5 9.37e-212 674.0
BYD3_k127_5466481_1 Multicopper oxidase K22348 - 1.16.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007029 490.0
BYD3_k127_5466481_10 Permease MlaE K02066 - - 0.00000000000000000000000000000000000000000000000000000005064 205.0
BYD3_k127_5466481_11 3-hydroxyacyl-CoA dehydrogenase - - - 0.000000000000000000000000000000000000002904 160.0
BYD3_k127_5466481_12 Thioesterase superfamily - - - 0.0000000000000000000000000000000000001268 160.0
BYD3_k127_5466481_13 NUDIX domain - - - 0.000000000000000000000000000000000007973 146.0
BYD3_k127_5466481_14 Uncharacterized conserved protein (DUF2203) - - - 0.0000000000000000000006371 104.0
BYD3_k127_5466481_15 Organic solvent ABC transporter substrate-binding protein K02067 - - 0.000000000000000000002571 104.0
BYD3_k127_5466481_16 alpha beta K06889 - - 0.0000000000000000002404 93.0
BYD3_k127_5466481_17 Patatin-like phospholipase K07001 - - 0.00000000000000002555 94.0
BYD3_k127_5466481_18 Putative phosphatase (DUF442) - - - 0.0000000000000000269 92.0
BYD3_k127_5466481_19 SnoaL-like domain - - - 0.000006614 56.0
BYD3_k127_5466481_2 protein kinase activity K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001121 422.0
BYD3_k127_5466481_20 TIGRFAM regulatory protein, FmdB - - - 0.0002554 50.0
BYD3_k127_5466481_3 PFAM multicopper oxidase type - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007506 402.0
BYD3_k127_5466481_4 transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001538 347.0
BYD3_k127_5466481_5 PFAM Cytochrome C - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004302 256.0
BYD3_k127_5466481_6 FES K03575 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000009945 264.0
BYD3_k127_5466481_7 Helix-turn-helix diphteria tox regulatory element K03709 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002666 245.0
BYD3_k127_5466481_8 ATPases associated with a variety of cellular activities K02065 - - 0.0000000000000000000000000000000000000000000000000000000000000002633 243.0
BYD3_k127_5466481_9 Protein involved in meta-pathway of phenol degradation - - - 0.000000000000000000000000000000000000000000000000000000000343 215.0
BYD3_k127_5488203_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.0 1020.0
BYD3_k127_5488203_1 isoleucine patch - - - 0.000000000000000000000000000000000000000000000000000002225 205.0
BYD3_k127_5526837_0 Flavin containing amine oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008596 391.0
BYD3_k127_5542414_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1043.0
BYD3_k127_5542414_1 Transketolase, pyrimidine binding domain K11381 - 1.2.4.4 0.0 1026.0
BYD3_k127_5542414_10 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.00000000000000000000000000000000000000000000000000000000000000000000001246 254.0
BYD3_k127_5542414_11 TIGRFAM intracellular protease, PfpI family K05520 - 3.5.1.124 0.0000000000000000000000000000000000000000000000000000000000000000000007144 241.0
BYD3_k127_5542414_12 TIGRFAM glutamine amidotransferase of anthranilate synthase K01658 - 4.1.3.27 0.0000000000000000000000000000000000000000000000000000000000000000479 242.0
BYD3_k127_5542414_13 OmpA family K03286 - - 0.0000000000000000000000000000000000000000000000000000003025 212.0
BYD3_k127_5542414_14 - - - - 0.00000000000000000000000000000000000000000000000000009198 200.0
BYD3_k127_5542414_15 Mazg nucleotide pyrophosphohydrolase K00800 - 2.5.1.19 0.000000000000000000000000000000000000000001848 168.0
BYD3_k127_5542414_16 pilus organization K07004 - - 0.0000000000000000000000000000000000000002942 166.0
BYD3_k127_5542414_17 SMART protein phosphatase 2C domain protein - - - 0.0000000000000000000000000000000007831 151.0
BYD3_k127_5542414_18 Serine aminopeptidase, S33 - - - 0.0000000000000000000006914 109.0
BYD3_k127_5542414_19 membrane - - - 0.000000000000000005592 89.0
BYD3_k127_5542414_2 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007424 606.0
BYD3_k127_5542414_20 Sugar-specific transcriptional regulator TrmB - - - 0.0000000000008094 77.0
BYD3_k127_5542414_21 - - - - 0.00000000005144 68.0
BYD3_k127_5542414_22 Rdx family K07401 - - 0.000000001596 60.0
BYD3_k127_5542414_3 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis K21071 - 2.7.1.11,2.7.1.90 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005694 452.0
BYD3_k127_5542414_4 Anthranilate synthase component I, N terminal region K01657,K01665 - 2.6.1.85,4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002817 420.0
BYD3_k127_5542414_5 Eukaryotic DNA topoisomerase I, catalytic core K03168 - 5.99.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003063 420.0
BYD3_k127_5542414_6 Proline dehydrogenase K00318 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004176 374.0
BYD3_k127_5542414_7 Serine/Threonine protein kinases, catalytic domain K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009772 382.0
BYD3_k127_5542414_8 domain, Protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004439 331.0
BYD3_k127_5542414_9 OmpA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003446 296.0
BYD3_k127_5596152_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 2.081e-255 796.0
BYD3_k127_5596152_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 4.126e-223 704.0
BYD3_k127_5596152_10 UPF0126 domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000009533 260.0
BYD3_k127_5596152_11 MlaD protein K02067 - - 0.0000000000000000000000000000000000000000000000000000000000000000177 241.0
BYD3_k127_5596152_12 NUDIX domain - - - 0.00000000000000000000000000000000000000000000004087 177.0
BYD3_k127_5596152_13 Helix-turn-helix domain - - - 0.00000000000000000000000000000007213 134.0
BYD3_k127_5596152_14 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 - - 0.00000000000000000000000000849 127.0
BYD3_k127_5596152_15 Domain of unknown function DUF302 - - - 0.0000000000000000005606 88.0
BYD3_k127_5596152_16 - - - - 0.0000001917 56.0
BYD3_k127_5596152_18 - - - - 0.0005692 43.0
BYD3_k127_5596152_2 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000096 454.0
BYD3_k127_5596152_3 PFAM Integral membrane protein TerC K05794 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000103 421.0
BYD3_k127_5596152_4 COG0624 Acetylornithine deacetylase Succinyl-diaminopimelate desuccinylase and related deacylases K01295 - 3.4.17.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001876 409.0
BYD3_k127_5596152_5 Mechanosensitive ion channel - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000053 374.0
BYD3_k127_5596152_6 Multicopper oxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007354 374.0
BYD3_k127_5596152_7 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002816 353.0
BYD3_k127_5596152_8 ABC transporter K02065 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005336 321.0
BYD3_k127_5596152_9 Permease MlaE K02066 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004324 269.0
BYD3_k127_5637737_0 ATPase family associated with various cellular activities (AAA) K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008864 483.0
BYD3_k127_5637737_1 Beta-lactamase class C and other penicillin binding proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004575 305.0
BYD3_k127_578926_0 GNAT family acetyltransferase K03802 - 6.3.2.29,6.3.2.30 0.0 1283.0
BYD3_k127_578926_1 Mur ligase family, glutamate ligase domain K03802 - 6.3.2.29,6.3.2.30 4.974e-242 791.0
BYD3_k127_578926_10 PFAM Peptidase family M48 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000018 328.0
BYD3_k127_578926_11 PFAM Rhodanese domain protein K01011 - 2.8.1.1,2.8.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002203 319.0
BYD3_k127_578926_12 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004771 323.0
BYD3_k127_578926_13 -O-antigen - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005073 337.0
BYD3_k127_578926_14 Leucyl-tRNA synthetase, Domain 2 K01869 - 6.1.1.4 0.000000000000000000000000000000000000000000000000000000000000000000001118 239.0
BYD3_k127_578926_15 Phosphate acyltransferases - - - 0.0000000000000000000000000000000000000000000000000000000000000003318 237.0
BYD3_k127_578926_16 Serine aminopeptidase, S33 - - - 0.0000000000000000000000000000000000000000000000000000001168 205.0
BYD3_k127_578926_17 Belongs to the UPF0312 family - - - 0.000000000000000000000000000000000000000007482 162.0
BYD3_k127_578926_18 bacterial OsmY and nodulation domain - - - 0.00000000000000000000000000000009185 142.0
BYD3_k127_578926_19 PFAM Fe-S metabolism associated K02426 - - 0.000000000000000000000000000002334 126.0
BYD3_k127_578926_2 Belongs to the metallo-dependent hydrolases superfamily. NagA family K01305,K01443 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0008242,GO:0008270,GO:0008798,GO:0016787,GO:0019538,GO:0042802,GO:0043167,GO:0043169,GO:0043170,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.5.1.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009054 499.0
BYD3_k127_578926_20 SMART chemotaxis sensory transducer, histidine kinase HAMP region domain protein K03406 - - 0.00000000000000000000000000001296 134.0
BYD3_k127_578926_21 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity - - - 0.0000000000000000005895 94.0
BYD3_k127_578926_23 Histidine kinase - - - 0.00002905 52.0
BYD3_k127_578926_3 Protein of unknown function (DUF1015) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002193 445.0
BYD3_k127_578926_4 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine K00831 - 2.6.1.52 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004712 438.0
BYD3_k127_578926_5 D-isomer specific 2-hydroxyacid dehydrogenase catalytic K00058 - 1.1.1.399,1.1.1.95 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001697 422.0
BYD3_k127_578926_6 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008915 388.0
BYD3_k127_578926_7 Mur ligase family, glutamate ligase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002219 396.0
BYD3_k127_578926_8 L,D-transpeptidase catalytic domain K21470 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007792 350.0
BYD3_k127_578926_9 Peptidase family S51 K13282 - 3.4.15.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001025 333.0
BYD3_k127_5809912_0 transmembrane transporter activity K18138 - - 0.0 1539.0
BYD3_k127_5809912_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001764 389.0
BYD3_k127_5809912_2 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001114 365.0
BYD3_k127_5809912_3 peptidase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000549 305.0
BYD3_k127_5809912_4 Alpha beta - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002049 281.0
BYD3_k127_5809912_5 RibD C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000002582 218.0
BYD3_k127_5809912_6 Protein of unknown function (DUF3830) - - - 0.00000000000000000000000000000000000000000000000000003246 195.0
BYD3_k127_5809912_7 Domain of unknown function (DUF1877) - - - 0.00000000000000000000000000000000000001925 151.0
BYD3_k127_5809912_8 helix_turn_helix, Arsenical Resistance Operon Repressor K03892 - - 0.000000000000000000000000000001645 123.0
BYD3_k127_5809912_9 RibD C-terminal domain - - - 0.00000000000000000000000716 115.0
BYD3_k127_5820308_0 AcrB/AcrD/AcrF family K03296 - - 2.184e-321 1035.0
BYD3_k127_5820308_1 GMC oxidoreductase - - - 5.664e-233 733.0
BYD3_k127_5820308_10 Gluconate 2-dehydrogenase subunit 3 - - - 0.00000000000000000007806 98.0
BYD3_k127_5820308_2 alginic acid biosynthetic process - - - 8.08e-216 692.0
BYD3_k127_5820308_3 AcrB/AcrD/AcrF family K03296 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009523 583.0
BYD3_k127_5820308_4 Xylose isomerase-like TIM barrel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009735 289.0
BYD3_k127_5820308_5 tRNA wobble adenosine to inosine editing - - - 0.0000000000000000000000000000000000000000000000000000000000000001938 234.0
BYD3_k127_5820308_6 Participates in the control of copper homeostasis K06201 - - 0.0000000000000000000000000000000000000000000000001229 191.0
BYD3_k127_5820308_7 Xylose isomerase-like TIM barrel K01816 - 5.3.1.22 0.000000000000000000000000000000007538 137.0
BYD3_k127_5820308_8 nuclear chromosome segregation - - - 0.00000000000000000000000009811 117.0
BYD3_k127_5820308_9 Putative inner membrane exporter, YdcZ K09936 - - 0.0000000000000000000000001391 111.0
BYD3_k127_5904416_0 Amidohydrolase family K06015 - 3.5.1.81 4.736e-229 726.0
BYD3_k127_5904416_1 FtsX-like permease family K02004 - - 2.693e-195 644.0
BYD3_k127_5904416_10 TIGRFAM argininosuccinate lyase K01755 - 4.3.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001792 312.0
BYD3_k127_5904416_11 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000008572 306.0
BYD3_k127_5904416_12 Glycosyl transferase 4-like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001245 285.0
BYD3_k127_5904416_13 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 GO:0003674,GO:0003824,GO:0003991,GO:0005488,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016597,GO:0016740,GO:0016772,GO:0016774,GO:0019752,GO:0031406,GO:0034618,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000009383 271.0
BYD3_k127_5904416_14 PFAM M42 glutamyl aminopeptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001077 276.0
BYD3_k127_5904416_15 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001522 263.0
BYD3_k127_5904416_16 Peptidase dimerisation domain K01438 - 3.5.1.16 0.000000000000000000000000000000000000000000000000000000000000000000006856 247.0
BYD3_k127_5904416_17 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006091,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0009060,GO:0009486,GO:0009987,GO:0015002,GO:0015672,GO:0015980,GO:0015988,GO:0015990,GO:0016020,GO:0016021,GO:0016491,GO:0022900,GO:0022904,GO:0031224,GO:0031226,GO:0034220,GO:0044237,GO:0044425,GO:0044459,GO:0044464,GO:0045333,GO:0051179,GO:0051234,GO:0055085,GO:0055114,GO:0071944,GO:0098655,GO:0098660,GO:0098662,GO:1902600 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000002521 220.0
BYD3_k127_5904416_18 GDSL-like Lipase/Acylhydrolase family K10804 - 3.1.1.5 0.00000000000000000000000000000000000000000000000000000000000003976 231.0
BYD3_k127_5904416_19 Cytochrome c oxidase subunit III K02276,K02299 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000001579 215.0
BYD3_k127_5904416_2 amino acid K03294 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001542 555.0
BYD3_k127_5904416_20 LexA-binding, inner membrane-associated putative hydrolase K07038 - - 0.00000000000000000000000000000000000000000000000000000000001678 218.0
BYD3_k127_5904416_21 Phospholipase Carboxylesterase K06999 - - 0.0000000000000000000000000000000000000000000000000000000000819 213.0
BYD3_k127_5904416_22 HAD-hyrolase-like K06019 - 3.6.1.1 0.0000000000000000000000000000000000000000000000000000000002798 215.0
BYD3_k127_5904416_23 Catalyzes the NADPH-dependent reduction of LysW - aminoadipate 6-phosphate to yield LysW -aminoadipate 6- semialdehyde K05829 - - 0.000000000000000000000000000000000000000000000000000000001761 224.0
BYD3_k127_5904416_24 Protein of unknown function DUF47 K07220 - - 0.00000000000000000000000000000000000000000000000000009958 202.0
BYD3_k127_5904416_25 Sigma-70 region 2 K03088 - - 0.000000000000000000000000000000000000000000000001827 180.0
BYD3_k127_5904416_26 Protein of unknown function (DUF423) - - - 0.000000000000000000000000000000000000000002512 164.0
BYD3_k127_5904416_27 Pfam:UPF0118 - - - 0.000000000000000000000000000000000000000008199 168.0
BYD3_k127_5904416_28 OsmC-like protein K04063 - - 0.000000000000000000000000000000000000002504 153.0
BYD3_k127_5904416_29 PFAM M42 glutamyl aminopeptidase - - - 0.00000000000000000000000000002282 130.0
BYD3_k127_5904416_3 Phosphate transporter family K03306 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003848 416.0
BYD3_k127_5904416_30 PFAM LmbE family protein K18455 - 3.5.1.115 0.000000000000000000000000001785 122.0
BYD3_k127_5904416_31 Regulates arginine biosynthesis genes K03402 - - 0.00000000000000000000000001179 115.0
BYD3_k127_5904416_32 Belongs to the ompA family K03286 - - 0.000000000000000000000000723 119.0
BYD3_k127_5904416_34 DNA restriction-modification system - - - 0.000000000000000000218 95.0
BYD3_k127_5904416_35 Putative adhesin - - - 0.000000000000000007126 98.0
BYD3_k127_5904416_36 PLD-like domain - - - 0.0000000000003589 83.0
BYD3_k127_5904416_37 Carbon monoxide dehydrogenase subunit G (CoxG) - - - 0.000000004088 63.0
BYD3_k127_5904416_38 PFAM Cytochrome c, class I - - - 0.0000006909 61.0
BYD3_k127_5904416_4 Enoyl-(Acyl carrier protein) reductase K00208 - 1.3.1.10,1.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003133 418.0
BYD3_k127_5904416_40 amine dehydrogenase activity - - - 0.000001713 60.0
BYD3_k127_5904416_5 Arginosuccinate synthase K01940 - 6.3.4.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001801 407.0
BYD3_k127_5904416_6 Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring K00857,K01920,K01935 GO:0003674,GO:0003824,GO:0004141,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0016882,GO:0017144,GO:0018130,GO:0019752,GO:0032787,GO:0034641,GO:0042364,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.1.21,6.3.2.3,6.3.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000105 347.0
BYD3_k127_5904416_7 PFAM Aminotransferase class-III K00821 - 2.6.1.11,2.6.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001078 329.0
BYD3_k127_5904416_8 Belongs to the ATCase OTCase family K09065 GO:0000050,GO:0003674,GO:0003824,GO:0004585,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0016743,GO:0019627,GO:0019752,GO:0034641,GO:0042450,GO:0043436,GO:0043603,GO:0043604,GO:0043857,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.3.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000582 314.0
BYD3_k127_5904416_9 ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002769 297.0
BYD3_k127_5939710_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296,K18138,K18307 - - 0.0 1038.0
BYD3_k127_5939710_1 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.99.17 5.477e-270 845.0
BYD3_k127_5939710_10 WD40-like Beta Propeller Repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006321 452.0
BYD3_k127_5939710_11 PFAM Rhodanese domain protein K01011 - 2.8.1.1,2.8.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002726 430.0
BYD3_k127_5939710_12 Zn_pept - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009822 440.0
BYD3_k127_5939710_13 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275,K17223 GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006119,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016020,GO:0016310,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0034641,GO:0042773,GO:0044237,GO:0044238,GO:0044281,GO:0044464,GO:0045333,GO:0046034,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:0071944,GO:0072521,GO:1901135,GO:1901360,GO:1901564 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007739 353.0
BYD3_k127_5939710_14 Flavodoxin-like fold K19784 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005083 297.0
BYD3_k127_5939710_15 Catalyzes the oxidation of either pyridoxine 5'- phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP) K00275 - 1.4.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001439 286.0
BYD3_k127_5939710_16 cytochrome c oxidase K02351 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002573 283.0
BYD3_k127_5939710_17 of the major facilitator superfamily K08151 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007001 280.0
BYD3_k127_5939710_18 formate transmembrane transporter activity K06212,K21990,K21993 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002355 275.0
BYD3_k127_5939710_19 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02483 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000009997 251.0
BYD3_k127_5939710_2 Pyrrolo-quinoline quinone K00114 - 1.1.2.8 1.47e-267 839.0
BYD3_k127_5939710_20 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003057 244.0
BYD3_k127_5939710_21 Histidine kinase K02482 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000003243 228.0
BYD3_k127_5939710_22 Signal peptidase, peptidase S26 K03100 - 3.4.21.89 0.000000000000000000000000000000000000000000000000000000000001796 216.0
BYD3_k127_5939710_23 Signal peptidase, peptidase S26 K03100 - 3.4.21.89 0.00000000000000000000000000000000000000000000000000000000006225 213.0
BYD3_k127_5939710_24 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.0000000000000000000000000000000000000000000000000000000003302 221.0
BYD3_k127_5939710_25 gluconolactonase activity K01053 - 3.1.1.17 0.00000000000000000000000000000000000000000000000000000006974 206.0
BYD3_k127_5939710_26 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.0000000000000000000000000000000000000000000000000000005559 211.0
BYD3_k127_5939710_27 Redoxin K03564 - 1.11.1.15 0.000000000000000000000000000000000000000000000000000004355 206.0
BYD3_k127_5939710_28 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000000000000009434 194.0
BYD3_k127_5939710_29 Putative stress-induced transcription regulator - - - 0.00000000000000000000000000000000000000000000005562 176.0
BYD3_k127_5939710_3 Cytochrome C and Quinol oxidase polypeptide I K02274 - 1.9.3.1 1.763e-246 794.0
BYD3_k127_5939710_30 cytochrome c oxidase, subunit III K02274,K02276,K15408 - 1.9.3.1 0.00000000000000000000000000000000000000000003325 175.0
BYD3_k127_5939710_31 Outer membrane efflux protein K12340 - - 0.000000000000000000000000000000000000000007212 179.0
BYD3_k127_5939710_32 Cytochrome C oxidase, cbb3-type, subunit III K00406 - - 0.00000000000000000000000000000000000000001267 162.0
BYD3_k127_5939710_33 esterase K03932 - - 0.0000000000000000000000000000000000000001197 166.0
BYD3_k127_5939710_34 - - - - 0.0000000000000000000000000000000000000005077 169.0
BYD3_k127_5939710_35 EamA-like transporter family - - - 0.00000000000000000000000000000000000002136 159.0
BYD3_k127_5939710_36 Pyridoxamine 5'-phosphate oxidase K07005 - - 0.0000000000000000000000000000000000005125 144.0
BYD3_k127_5939710_37 AIR synthase related protein, C-terminal domain - - - 0.0000000000000000000000000000000009229 144.0
BYD3_k127_5939710_38 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000000000000001099 122.0
BYD3_k127_5939710_39 CBS domain containing protein - - - 0.0000000000000000000000001894 116.0
BYD3_k127_5939710_4 lysine biosynthetic process via aminoadipic acid - - - 7.111e-240 765.0
BYD3_k127_5939710_40 - - - - 0.0000000000000000000000002635 109.0
BYD3_k127_5939710_41 - - - - 0.00000000000000000000001078 113.0
BYD3_k127_5939710_42 PFAM extracellular solute-binding protein family 1 K11069 - - 0.00000000000000000000004393 113.0
BYD3_k127_5939710_43 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.0000000000000000000001212 100.0
BYD3_k127_5939710_44 - - - - 0.00000000000000001218 88.0
BYD3_k127_5939710_45 Participates in electron transfer between P700 and the cytochrome b6-f complex in photosystem I K02638 - - 0.0000001379 58.0
BYD3_k127_5939710_46 BlaR1 peptidase M56 - - - 0.0000007224 62.0
BYD3_k127_5939710_47 transcriptional regulator - - - 0.0000008305 59.0
BYD3_k127_5939710_48 glyoxalase bleomycin resistance protein dioxygenase - - - 0.000002674 58.0
BYD3_k127_5939710_5 TonB-dependent receptor K02014 - - 4.695e-201 655.0
BYD3_k127_5939710_51 COG0589 Universal stress protein UspA and related nucleotide-binding proteins - - - 0.0008025 51.0
BYD3_k127_5939710_6 Phospholipase D Transphosphatidylase K06131 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008607 600.0
BYD3_k127_5939710_7 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008157 606.0
BYD3_k127_5939710_8 Peptidase family M28 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001644 571.0
BYD3_k127_5939710_9 Multicopper oxidase K22348 - 1.16.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001111 516.0
BYD3_k127_5987750_0 Protein kinase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001944 301.0
BYD3_k127_5987750_1 Ami_3 K01448 - 3.5.1.28 0.00000000000000000000000000000000006574 149.0
BYD3_k127_6120301_0 B12 binding domain K00548 - 2.1.1.13 0.0 1746.0
BYD3_k127_6120301_1 Methylenetetrahydrofolate reductase K00297,K00547 - 1.5.1.20,2.1.1.10 6.059e-241 758.0
BYD3_k127_6120301_2 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000455 514.0
BYD3_k127_6120301_3 Fatty acid desaturase K03921 - 1.14.19.11,1.14.19.2,1.14.19.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005673 450.0
BYD3_k127_6120301_4 M42 glutamyl aminopeptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005039 256.0
BYD3_k127_6120301_5 D-Ala-D-Ala carboxypeptidase 3 (S13) family K07259 - 3.4.16.4 0.00000000000000000000000000000000000000005629 170.0
BYD3_k127_6120301_6 - - - - 0.00000000000000000000000000000000000001113 151.0
BYD3_k127_6120301_7 YGGT family K02221 - - 0.0000000000000000000000000000002181 134.0
BYD3_k127_6120301_8 - - - - 0.0000000000000000003475 90.0
BYD3_k127_6120301_9 DUF167 K09131 - - 0.000000000000000002033 94.0
BYD3_k127_6144936_0 Protein of unknown function (DUF819) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003349 531.0
BYD3_k127_6144936_1 epimerase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005863 320.0
BYD3_k127_6144936_2 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000394 293.0
BYD3_k127_6144936_3 Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002232 254.0
BYD3_k127_6144936_4 PFAM Protein kinase domain - - - 0.00000000000000000000000000000000000000000000000000000000157 228.0
BYD3_k127_6144936_5 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000001771 192.0
BYD3_k127_6144936_6 efflux transmembrane transporter activity K02004 - - 0.0000000000000000000000000000000000000000004084 175.0
BYD3_k127_6144936_7 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.000000000000000000000006296 115.0
BYD3_k127_6144936_9 - - - - 0.00000000000000000000004033 113.0
BYD3_k127_616358_0 Peptidase family M28 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009453 495.0
BYD3_k127_616358_1 amine dehydrogenase activity K17285 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007387 446.0
BYD3_k127_616358_2 Beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000000000002047 254.0
BYD3_k127_6207439_0 with chaperone activity ATP-binding K03696 - - 9.339e-227 720.0
BYD3_k127_6207439_1 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009354 500.0
BYD3_k127_6207439_2 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007969 446.0
BYD3_k127_6207439_3 ATP:guanido phosphotransferase, C-terminal catalytic domain K19405 - 2.7.14.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008041 430.0
BYD3_k127_6207439_4 MacB-like periplasmic core domain K09808 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006818 381.0
BYD3_k127_6207439_5 Diguanylate cyclase, GGDEF domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001465 328.0
BYD3_k127_6207439_6 PFAM Sodium calcium exchanger protein K07300 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102 325.0
BYD3_k127_6207439_7 Part of the ABC transporter complex LolCDE involved in the translocation of K09810 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001321 272.0
BYD3_k127_6207439_8 - - - - 0.000000000000000000000000000000000000000000005008 175.0
BYD3_k127_6207439_9 UvrB/uvrC motif K19411 - - 0.0000000000000000000000000000000000000003418 162.0
BYD3_k127_6215870_0 COGs COG1022 Long-chain acyl-CoA synthetase (AMP-forming) K01897 - 6.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006717 558.0
BYD3_k127_6215870_1 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000044 173.0
BYD3_k127_6215870_2 Phosphoribosyl transferase domain K07101 - - 0.000000000000000000000000000000000000000000004354 168.0
BYD3_k127_6220691_0 ABC transporter K06158 - - 2.082e-199 642.0
BYD3_k127_6220691_1 DEAD-like helicases superfamily K11927 - 3.6.4.13 6.687e-198 628.0
BYD3_k127_6220691_10 Essential for recycling GMP and indirectly, cGMP K00942 - 2.7.4.8 0.000000000000000000000000000000000000000000000000000005168 198.0
BYD3_k127_6220691_11 Glycerophosphoryl diester phosphodiesterase family K01126 - 3.1.4.46 0.000000000000000000000000000000000000000000000000006483 189.0
BYD3_k127_6220691_12 ArsC family - - - 0.00000000000000000000000000000000000000000000001536 178.0
BYD3_k127_6220691_13 NfeD-like C-terminal, partner-binding K07403 - - 0.000000000000000000000000004673 119.0
BYD3_k127_6220691_14 TonB-dependent Receptor Plug Domain - - - 0.000000001563 71.0
BYD3_k127_6220691_2 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004545 554.0
BYD3_k127_6220691_3 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004662 447.0
BYD3_k127_6220691_4 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001637 439.0
BYD3_k127_6220691_5 SigmaW regulon antibacterial - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003534 423.0
BYD3_k127_6220691_6 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004192 354.0
BYD3_k127_6220691_7 MOSC N-terminal beta barrel domain K07140 - - 0.0000000000000000000000000000000000000000000000000000000000000001986 233.0
BYD3_k127_6220691_8 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions K01507 - 3.6.1.1 0.000000000000000000000000000000000000000000000000000000000000002801 225.0
BYD3_k127_6220691_9 Domain of unknown function (DUF1732) - - - 0.00000000000000000000000000000000000000000000000000000002311 208.0
BYD3_k127_6233563_0 Sodium/hydrogen exchanger family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006127 464.0
BYD3_k127_6233563_1 NhaP-type Na H and K H - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004341 373.0
BYD3_k127_6233563_2 dihydroorotate dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002271 297.0
BYD3_k127_6233563_3 carboxylic acid catabolic process K02549 GO:0006732,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009233,GO:0009234,GO:0009987,GO:0042180,GO:0042181,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0051186,GO:0051188,GO:0071704,GO:1901576,GO:1901661,GO:1901663 4.2.1.113 0.000000000000000000000000000000000000000000000000000000000000000000000000001444 280.0
BYD3_k127_6233563_4 Dihydrodipicolinate synthetase family - - - 0.0000000000000000000000000000000000000000000000000000000000231 216.0
BYD3_k127_6233563_5 amidohydrolase - - - 0.0000000000000000000000000000000000001549 146.0
BYD3_k127_6233563_6 protein histidine kinase activity - - - 0.00000000000000000000000000000001888 139.0
BYD3_k127_6236116_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002596 500.0
BYD3_k127_6236116_1 Pyridine nucleotide-disulphide oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003015 340.0
BYD3_k127_6236116_2 Histidine kinase A domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009829 333.0
BYD3_k127_6236116_3 Chromate resistance exported protein - - - 0.000000000000000000000000000000000000000000000000000000000000007832 229.0
BYD3_k127_6236116_4 Chromate resistance exported protein - - - 0.0000000000000000000000000000000000000000000000000000001035 201.0
BYD3_k127_6236116_5 Cytochrome C and Quinol oxidase polypeptide I K15862 - 1.9.3.1 0.00000000000000000000000000000000000000000001258 169.0
BYD3_k127_6236116_6 transcriptional regulator - - - 0.000000000000000000000000000002726 128.0
BYD3_k127_6257102_0 Oxidoreductase family, NAD-binding Rossmann fold - - - 2.453e-199 627.0
BYD3_k127_6257102_1 alpha-l-fucosidase K01206 - 3.2.1.51 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001195 591.0
BYD3_k127_6257102_2 phosphatase activity K07025 - - 0.00000000000000000000000000000000000000000000000006504 184.0
BYD3_k127_6257102_3 Gluconate 2-dehydrogenase subunit 3 - - - 0.00000000000000000000000000648 110.0
BYD3_k127_6259958_0 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K08483 GO:0006810,GO:0008150,GO:0008643,GO:0009401,GO:0051179,GO:0051234,GO:0071702 2.7.3.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005685 347.0
BYD3_k127_6259958_1 PTS HPr component phosphorylation site K11189 - - 0.000000000000000000001602 96.0
BYD3_k127_6326854_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 3.604e-301 953.0
BYD3_k127_6326854_1 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 1.301e-284 904.0
BYD3_k127_6326854_10 Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001437 454.0
BYD3_k127_6326854_11 cytochrome c peroxidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004219 421.0
BYD3_k127_6326854_12 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain K00074 - 1.1.1.157 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001218 398.0
BYD3_k127_6326854_13 secondary active sulfate transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006253 350.0
BYD3_k127_6326854_14 Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis K01042 - 2.9.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002506 308.0
BYD3_k127_6326854_15 conserved protein (DUF2183) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002115 307.0
BYD3_k127_6326854_16 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002345 287.0
BYD3_k127_6326854_17 Phosphoribosyl transferase domain K00760 - 2.4.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000001134 261.0
BYD3_k127_6326854_18 Pterin binding enzyme K00796,K13941 - 2.5.1.15,2.7.6.3 0.00000000000000000000000000000000000000000000000000000000000000000002446 250.0
BYD3_k127_6326854_19 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.0000000000000000000000000000000000000000000000000000000000000002265 236.0
BYD3_k127_6326854_2 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 4.361e-266 833.0
BYD3_k127_6326854_20 Ribose/Galactose Isomerase K01808 - 5.3.1.6 0.000000000000000000000000000000000000000000000000000002156 194.0
BYD3_k127_6326854_21 Phosphate acyltransferases K00655 - 2.3.1.51 0.00000000000000000000000000000000000000000000000002101 190.0
BYD3_k127_6326854_22 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.000000000000000000000000000000000000000000001926 179.0
BYD3_k127_6326854_23 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K00760,K04075 - 2.4.2.8,6.3.4.19 0.00000000000000000000000000000000000000000001483 180.0
BYD3_k127_6326854_24 Bacterial Ig-like domain - - - 0.000000000000000000000000000000000000000459 170.0
BYD3_k127_6326854_25 Two component regulator propeller - - - 0.00000000000000000000000000000000000000358 164.0
BYD3_k127_6326854_26 - - - - 0.00000000000000000000000000000000007229 147.0
BYD3_k127_6326854_27 Divergent 4Fe-4S mono-cluster - - - 0.0000000000000000000000000000000174 137.0
BYD3_k127_6326854_28 OsmC-like protein K06889,K07397 - - 0.00000000000000000000000000000001836 133.0
BYD3_k127_6326854_29 CAAX protease self-immunity K07052 - - 0.0000000000000000000000000000009076 134.0
BYD3_k127_6326854_3 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001232 593.0
BYD3_k127_6326854_30 PFAM BioY protein K03523 - - 0.0000000000000000000000000003015 127.0
BYD3_k127_6326854_31 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 GO:0003674,GO:0003824,GO:0004812,GO:0004829,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006435,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.3 0.0000000000000000000000000003506 120.0
BYD3_k127_6326854_32 - - - - 0.00000000000000000000000009038 119.0
BYD3_k127_6326854_33 Dodecin K09165 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0016020,GO:0030312,GO:0044464,GO:0071944 - 0.0000000000000000007198 88.0
BYD3_k127_6326854_34 PFAM DivIVA family protein K04074 - - 0.0000000005807 66.0
BYD3_k127_6326854_35 Septum formation initiator K05589 - - 0.0000002849 61.0
BYD3_k127_6326854_4 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008772 565.0
BYD3_k127_6326854_5 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003569 542.0
BYD3_k127_6326854_6 Threonyl and Alanyl tRNA synthetase second additional domain K01868 - 6.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003479 524.0
BYD3_k127_6326854_7 HlyD family secretion protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006449 497.0
BYD3_k127_6326854_8 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase K00263 - 1.4.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007291 471.0
BYD3_k127_6326854_9 Belongs to the thiolase family K00626 - 2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002441 467.0
BYD3_k127_6347440_0 oxidoreductase activity, acting on the CH-NH group of donors, quinone or similar compound as acceptor K00311 GO:0003674,GO:0003824,GO:0004174,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005759,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016491,GO:0016645,GO:0016649,GO:0016722,GO:0017133,GO:0019866,GO:0022900,GO:0022904,GO:0031090,GO:0031224,GO:0031300,GO:0031301,GO:0031304,GO:0031305,GO:0031966,GO:0031967,GO:0031974,GO:0031975,GO:0032592,GO:0032991,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043783,GO:0044237,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0045251,GO:0045333,GO:0048037,GO:0048038,GO:0048039,GO:0051536,GO:0051539,GO:0051540,GO:0055114,GO:0070013,GO:0098573,GO:0098798,GO:1902494,GO:1990204 1.5.5.1 2.388e-199 645.0
BYD3_k127_6347440_1 Acyl-CoA dehydrogenase, C-terminal domain K00252 - 1.3.8.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003792 605.0
BYD3_k127_6347440_10 PFAM Integral membrane protein TerC K05794 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006247 325.0
BYD3_k127_6347440_11 Belongs to the transferase hexapeptide repeat family K00674 - 2.3.1.117 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002186 333.0
BYD3_k127_6347440_12 Integral membrane protein TerC family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004165 309.0
BYD3_k127_6347440_13 PFAM peptidase K01438 - 3.5.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003211 306.0
BYD3_k127_6347440_14 Uncharacterised protein family UPF0047 - - - 0.000000000000000000000000000000000000000000000000000000000000000001727 229.0
BYD3_k127_6347440_15 Belongs to the FPG family K10563 - 3.2.2.23,4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000003711 227.0
BYD3_k127_6347440_16 diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000009712 194.0
BYD3_k127_6347440_17 Quinolinate phosphoribosyl transferase, C-terminal domain K00767 - 2.4.2.19 0.00000000000000000000000000000000000000000000008299 181.0
BYD3_k127_6347440_18 protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000001033 170.0
BYD3_k127_6347440_19 methylamine metabolic process K15977 - - 0.00000000000000000000000000000000000000005406 156.0
BYD3_k127_6347440_2 Vacuole effluxer Atg22 like K06902 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002429 584.0
BYD3_k127_6347440_20 Calcineurin-like phosphoesterase - - - 0.0000000000000000000000000000000000000000616 160.0
BYD3_k127_6347440_21 helix_turn_helix multiple antibiotic resistance protein - - - 0.0000000000000000000000000000000001185 151.0
BYD3_k127_6347440_3 membrane organization - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001931 557.0
BYD3_k127_6347440_4 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001931 412.0
BYD3_k127_6347440_5 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001099 403.0
BYD3_k127_6347440_6 Electron transfer flavoprotein domain K03522 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002949 398.0
BYD3_k127_6347440_7 Peptidase family M48 K03799 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002195 343.0
BYD3_k127_6347440_8 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K07104 - 1.13.11.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000201 336.0
BYD3_k127_6347440_9 Electron transfer flavoprotein domain K03521 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002068 324.0
BYD3_k127_6385654_0 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 2.718e-287 908.0
BYD3_k127_6385654_1 Participates in both transcription termination and antitermination K02600 - - 3.555e-201 634.0
BYD3_k127_6385654_2 Required for maturation of 30S ribosomal subunits K09748 - - 0.0000000000000000000000000001649 121.0
BYD3_k127_6385654_3 methyltransferase - - - 0.00000000000000006127 91.0
BYD3_k127_6385654_4 protein conserved in bacteria K09764 - - 0.00000000000008366 75.0
BYD3_k127_6385654_5 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family - - - 0.0000000000003581 74.0
BYD3_k127_6398120_0 Isocitrate/isopropylmalate dehydrogenase K00030 - 1.1.1.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001393 467.0
BYD3_k127_6398120_1 Putative zinc-binding metallo-peptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006914 435.0
BYD3_k127_6398120_2 Amino acid permease K03294 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004063 321.0
BYD3_k127_6398120_3 PFAM Diacylglycerol kinase, catalytic - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001408 278.0
BYD3_k127_6398120_4 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000007933 255.0
BYD3_k127_6398120_5 Calcineurin-like phosphoesterase superfamily domain - - - 0.0000000000000000000000000000000000000000000000000000000000000996 232.0
BYD3_k127_6398120_6 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000001108 215.0
BYD3_k127_6398120_7 Domain of unknown function (DUF4139) - - - 0.000000000000000000000000000000000000001234 166.0
BYD3_k127_6516451_0 Atp-dependent helicase - - - 1.092e-314 995.0
BYD3_k127_6516451_1 Rhodanese Homology Domain K01069 - 3.1.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002437 580.0
BYD3_k127_6516451_2 Sulfite exporter TauE/SafE K07090 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000008012 269.0
BYD3_k127_6516451_3 Anthranilate synthase component I, N terminal region K01657,K01665 - 2.6.1.85,4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000001021 275.0
BYD3_k127_6516451_4 COG0720 6-pyruvoyl-tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.00000000000000000000000000000000003184 140.0
BYD3_k127_6516451_5 Pterin 4 alpha carbinolamine dehydratase K01724 - 4.2.1.96 0.00000000000000000000000000005432 129.0
BYD3_k127_6516451_6 DNA-binding transcription factor activity K03892 - - 0.000000000000000000000009736 116.0
BYD3_k127_6516451_7 BetI-type transcriptional repressor, C-terminal - - - 0.000002217 58.0
BYD3_k127_6536274_0 - - - - 0.0000000000000000000000000000000000000000000000000000009693 210.0
BYD3_k127_6536274_1 alpha/beta hydrolase fold - - - 0.00000000000000000000000000000000000000000002926 172.0
BYD3_k127_6536274_2 Acetyltransferase (GNAT) domain K00619 - 2.3.1.1 0.0000000000000000000001107 104.0
BYD3_k127_6536274_3 Putative regulatory protein - - - 0.00000000001205 67.0
BYD3_k127_6536274_4 LD-carboxypeptidase K01297 - 3.4.17.13 0.00000001081 57.0
BYD3_k127_6614270_0 AcrB/AcrD/AcrF family K03296 - - 0.0 1430.0
BYD3_k127_6614270_1 Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001527 349.0
BYD3_k127_6614270_2 Biotin-lipoyl like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001226 297.0
BYD3_k127_6614270_3 Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000000000001768 133.0
BYD3_k127_6614270_4 DNA-binding transcription factor activity - - - 0.0000000000005343 73.0
BYD3_k127_6629234_0 PFAM GlcNAc-PI de-N-acetylase - - - 2.421e-236 754.0
BYD3_k127_6636798_0 4Fe-4S dicluster domain K00184 - - 9.702e-243 784.0
BYD3_k127_6636798_1 Type II/IV secretion system protein K02669 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009701 555.0
BYD3_k127_6636798_10 - - - - 0.00000003465 61.0
BYD3_k127_6636798_2 Polysulphide reductase, NrfD K00185 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007058 533.0
BYD3_k127_6636798_3 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K00020 - 1.1.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001017 294.0
BYD3_k127_6636798_4 Pfam Polysulphide reductase, NrfD - - - 0.00000000000000000000000000000000000000000000000000000003288 214.0
BYD3_k127_6636798_5 SpoU rRNA Methylase family K02533,K15396 - 2.1.1.200 0.0000000000000000000000000000000000000000000000000327 188.0
BYD3_k127_6636798_6 Cytochrome c7 and related cytochrome c - - - 0.0000000000000000000000000000000000001417 149.0
BYD3_k127_6636798_7 FR47-like protein - - - 0.000000000000000000000000000000000000513 154.0
BYD3_k127_6636798_8 Protein of unknown function (DUF3341) - - - 0.00000000000000000000000000507 128.0
BYD3_k127_6636798_9 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000000000000009807 91.0
BYD3_k127_671621_0 Bacterial regulatory protein, Fis family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006798 556.0
BYD3_k127_671621_1 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 - 2.1.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009171 475.0
BYD3_k127_671621_2 metallopeptidase activity K01993,K13408,K16922 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007375 467.0
BYD3_k127_671621_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K01993,K16922 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008243 443.0
BYD3_k127_671621_4 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002531 429.0
BYD3_k127_671621_5 protein kinase activity K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000005986 237.0
BYD3_k127_671621_6 Probable molybdopterin binding domain K03831 - 2.7.7.75 0.0000000000000000000000000000000000000000000000000005472 188.0
BYD3_k127_671621_7 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.00000000000000000000000000000000000000000000000001826 194.0
BYD3_k127_671621_8 PFAM 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.00000001552 62.0
BYD3_k127_6747839_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 4.769e-317 981.0
BYD3_k127_6747839_1 Protein kinase domain K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001802 516.0
BYD3_k127_6795248_0 Belongs to the deoxyhypusine synthase family K00809 - 2.5.1.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001952 491.0
BYD3_k127_6795248_1 Possible lysine decarboxylase K06966 - 3.2.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001145 294.0
BYD3_k127_6795248_2 Organic Anion Transporter Polypeptide (OATP) family - - - 0.000000000000000000000000000000000000000000000000000000006727 218.0
BYD3_k127_6795248_3 Domain of unknown function (DUF1330) - - - 0.0000000000000000000000000000000000213 139.0
BYD3_k127_6795248_4 - - - - 0.000000006051 59.0
BYD3_k127_6813189_0 Aminotransferase class-V - - - 2.902e-197 633.0
BYD3_k127_6813189_1 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001074 537.0
BYD3_k127_6813189_10 DinB family - - - 0.000000000000000000000000000001396 126.0
BYD3_k127_6813189_11 Transglycosylase associated protein - - - 0.000000000000000000000000002595 113.0
BYD3_k127_6813189_12 - - - - 0.0000000000000000008224 92.0
BYD3_k127_6813189_13 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain - - - 0.000000000000203 76.0
BYD3_k127_6813189_14 Chagasin family peptidase inhibitor I42 K14475 - - 0.0000000000009206 73.0
BYD3_k127_6813189_15 - - - - 0.00000008343 59.0
BYD3_k127_6813189_2 cellulose binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002965 304.0
BYD3_k127_6813189_3 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.00000000000000000000000000000000000000000000000000000000000000001603 234.0
BYD3_k127_6813189_4 DinB superfamily - - - 0.000000000000000000000000000000000000000000000000000007631 196.0
BYD3_k127_6813189_5 Glyoxalase-like domain K06996 - - 0.000000000000000000000000000000000000000000000000000009077 193.0
BYD3_k127_6813189_6 Putative member of DMT superfamily (DUF486) K09922 - - 0.0000000000000000000000000000000000000000000000001233 180.0
BYD3_k127_6813189_7 Protein of unknown function, DUF - - - 0.000000000000000000000000000000000000000000368 169.0
BYD3_k127_6813189_8 PFAM 6-O-methylguanine DNA methyltransferase, DNA binding domain K07443 - - 0.0000000000000000000000000000000002458 134.0
BYD3_k127_6813189_9 - - - - 0.0000000000000000000000000000000005465 138.0
BYD3_k127_6839617_0 Peptidase family S58 K01266 - 3.4.11.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002786 465.0
BYD3_k127_6839617_1 GMC oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003315 437.0
BYD3_k127_6839617_2 Amidohydrolase family K06015 - 3.5.1.81 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002339 415.0
BYD3_k127_6839617_3 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002022 313.0
BYD3_k127_6839617_4 Macrocin-O-methyltransferase (TylF) K05303 - - 0.0000000000000000000000000000000000000004212 170.0
BYD3_k127_6839617_5 Bacterial protein of unknown function (DUF937) - - - 0.0000000000000000000000000000000000001607 148.0
BYD3_k127_6839617_6 Protein of unknown function (DUF2911) - - - 0.00000000000000000000000000000000009564 143.0
BYD3_k127_6839617_7 Histidine kinase - - - 0.000000000000000000345 94.0
BYD3_k127_6839617_8 Acetyl-coenzyme A synthetase N-terminus - - - 0.000001045 50.0
BYD3_k127_6839617_9 Amino-transferase class IV - - - 0.000003874 59.0
BYD3_k127_6956190_0 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus K00341 - 1.6.5.3 9.707e-222 716.0
BYD3_k127_6956190_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 4.813e-204 642.0
BYD3_k127_6956190_10 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000007354 271.0
BYD3_k127_6956190_11 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000004233 258.0
BYD3_k127_6956190_12 Thioredoxin-like [2Fe-2S] ferredoxin K00334 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000003441 230.0
BYD3_k127_6956190_13 TIGRFAM proton-translocating NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 0.00000000000000000000000000000000000000000006102 169.0
BYD3_k127_6956190_14 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 - 1.6.5.3 0.000000000000000000000000000000000000003845 152.0
BYD3_k127_6956190_15 LVIVD repeat - - - 0.0000000000000000000000000000000000002094 158.0
BYD3_k127_6956190_16 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 - 1.6.5.3 0.00000000000000000000000001124 123.0
BYD3_k127_6956190_17 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 K00339 - 1.6.5.3 0.0000000000000000000000002192 115.0
BYD3_k127_6956190_2 TIGRFAM succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00239 - 1.3.5.1,1.3.5.4 3.542e-200 628.0
BYD3_k127_6956190_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 - 1.6.5.3 1.749e-198 632.0
BYD3_k127_6956190_4 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region K00336 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008009 554.0
BYD3_k127_6956190_5 4Fe-4S binding domain K00240 - 1.3.5.1,1.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004673 393.0
BYD3_k127_6956190_6 Belongs to the dCTP deaminase family K01494 - 3.5.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006932 333.0
BYD3_k127_6956190_7 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001465 335.0
BYD3_k127_6956190_8 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006209 304.0
BYD3_k127_6956190_9 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006079 294.0
BYD3_k127_6986301_0 Uncharacterized protein family (UPF0051) K09014 - - 1.112e-263 819.0
BYD3_k127_6986301_1 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005534 526.0
BYD3_k127_6986301_10 Beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002943 293.0
BYD3_k127_6986301_11 hydrolase activity, acting on ester bonds - - - 0.00000000000000000000000000000000000000000000000000000006969 212.0
BYD3_k127_6986301_12 Disulphide isomerase - - - 0.00000000000000000000000000000000000000000000000004574 182.0
BYD3_k127_6986301_13 Phospholipid methyltransferase - - - 0.00000000000000000000000000000000000000000000000007372 182.0
BYD3_k127_6986301_14 SUF system FeS assembly protein, NifU family K04488 - - 0.000000000000000000000000000000000000000000007352 171.0
BYD3_k127_6986301_15 4Fe-4S binding domain - - - 0.0000000000000000000000000000000000000000001059 162.0
BYD3_k127_6986301_16 HTH domain - - - 0.000000000000000000000000000000000000003706 156.0
BYD3_k127_6986301_17 COGs COG2409 drug exporter of the RND superfamily K06994 - - 0.000000000000000000000000000000000000003841 159.0
BYD3_k127_6986301_18 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.00000000000000000000000000000000005885 141.0
BYD3_k127_6986301_19 metal-sulfur cluster biosynthetic - - - 0.0000000000000000000000000004259 116.0
BYD3_k127_6986301_2 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002933 428.0
BYD3_k127_6986301_20 Thioesterase K07107,K12500 - - 0.000000000000000000002358 108.0
BYD3_k127_6986301_21 Protein conserved in bacteria - - - 0.00000000001181 74.0
BYD3_k127_6986301_22 4Fe-4S single cluster domain of Ferredoxin I K05337 - - 0.000000001255 63.0
BYD3_k127_6986301_3 ABC transporter K09013 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001442 396.0
BYD3_k127_6986301_4 ABC transporter K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002509 384.0
BYD3_k127_6986301_5 Esterase of the alpha-beta hydrolase superfamily K07001 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001763 393.0
BYD3_k127_6986301_6 Uncharacterized protein family (UPF0051) K09015 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009907 389.0
BYD3_k127_6986301_7 3'-5' exonuclease K03684 - 3.1.13.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001225 376.0
BYD3_k127_6986301_8 COG1668 ABC-type Na efflux pump, permease component K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001871 365.0
BYD3_k127_6986301_9 C-terminal domain of 1-Cys peroxiredoxin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002823 345.0
BYD3_k127_7023855_0 Malate synthase K01638 - 2.3.3.9 1.678e-228 721.0
BYD3_k127_7023855_1 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 1.367e-226 734.0
BYD3_k127_7023855_10 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001029 427.0
BYD3_k127_7023855_11 Phosphoglucose isomerase K01810 - 5.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001408 423.0
BYD3_k127_7023855_12 Biotin-lipoyl like K02005 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002095 411.0
BYD3_k127_7023855_13 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002465 390.0
BYD3_k127_7023855_14 ADP-ribosylation factor family K06883 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002326 371.0
BYD3_k127_7023855_15 Aminotransferase class-V K04487 - 2.8.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009694 376.0
BYD3_k127_7023855_16 Competence-damaged protein K03742 - 3.5.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002385 380.0
BYD3_k127_7023855_17 membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009928 354.0
BYD3_k127_7023855_18 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001215 363.0
BYD3_k127_7023855_19 Metallo-beta-lactamase superfamily K06167 - 3.1.4.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002517 318.0
BYD3_k127_7023855_2 Isocitrate lyase K01637 - 4.1.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007395 609.0
BYD3_k127_7023855_20 GlcNAc-PI de-N-acetylase K01463 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003659 298.0
BYD3_k127_7023855_21 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009056,GO:0009057,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019538,GO:0030163,GO:0042623,GO:0042802,GO:0043170,GO:0044238,GO:0044464,GO:0070011,GO:0071704,GO:0071944,GO:0140096,GO:1901564,GO:1901565,GO:1901575 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001613 274.0
BYD3_k127_7023855_22 tail specific protease K03797 - 3.4.21.102 0.0000000000000000000000000000000000000000000000000000000000000000000000000001277 275.0
BYD3_k127_7023855_23 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005802 250.0
BYD3_k127_7023855_24 extracellular polysaccharide biosynthetic process K13582 - - 0.00000000000000000000000000000000000000000000000000000000000001676 228.0
BYD3_k127_7023855_25 creatininase K01470,K22232 - 3.5.2.10 0.000000000000000000000000000000000000000000000000000000000001673 219.0
BYD3_k127_7023855_26 Roadblock/LC7 domain - - - 0.000000000000000000000000000000000000000000000000000001252 196.0
BYD3_k127_7023855_27 CDP-alcohol phosphatidyltransferase K00995 - 2.7.8.5 0.000000000000000000000000000000000000000000008065 172.0
BYD3_k127_7023855_28 Virulence factor BrkB K07058 - - 0.00000000000000000000000000000000000003531 159.0
BYD3_k127_7023855_29 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.0000000000000000000000000000003538 132.0
BYD3_k127_7023855_3 Fructose-bisphosphate aldolase class-II - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002855 576.0
BYD3_k127_7023855_30 PFAM membrane protein of K08972 - - 0.000000000000000000000000005399 118.0
BYD3_k127_7023855_31 - K07283 - - 0.000000000001256 81.0
BYD3_k127_7023855_32 - - - - 0.00000000001635 70.0
BYD3_k127_7023855_33 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.000000000837 64.0
BYD3_k127_7023855_34 Pyruvate kinase, barrel domain K00873 - 2.7.1.40 0.0000004734 52.0
BYD3_k127_7023855_35 Outer membrane efflux protein K12340 - - 0.00001208 58.0
BYD3_k127_7023855_4 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006379 553.0
BYD3_k127_7023855_5 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001356 501.0
BYD3_k127_7023855_6 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001228 525.0
BYD3_k127_7023855_7 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001184 493.0
BYD3_k127_7023855_8 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008429 466.0
BYD3_k127_7023855_9 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001007 431.0
BYD3_k127_7081336_0 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007402 635.0
BYD3_k127_7081336_1 ECF sigma factor - - - 0.00000000000000000000000000000000000000000000000000000000000002205 219.0
BYD3_k127_7081336_2 beta-lactamase - - - 0.000001816 53.0
BYD3_k127_7104462_0 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 9.372e-246 782.0
BYD3_k127_7104462_1 glycosyl transferase family K00697,K16055 - 2.4.1.15,2.4.1.347,3.1.3.12 6.331e-238 756.0
BYD3_k127_7104462_10 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006752 307.0
BYD3_k127_7104462_11 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000003339 265.0
BYD3_k127_7104462_12 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 - - 0.00000000000000000000000000000000000000000000000000000000000000000003291 235.0
BYD3_k127_7104462_13 Belongs to the GHMP kinase family. GalK subfamily K00849 - 2.7.1.6 0.00000000000000000000000000000000000000000000000000000000000000000119 242.0
BYD3_k127_7104462_14 Polyprenyl synthetase K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.00000000000000000000000000000000000000000000000000000000000000001979 244.0
BYD3_k127_7104462_15 EXOIII K02342 - 2.7.7.7 0.00000000000000000000000000000000000000000000001537 185.0
BYD3_k127_7104462_16 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 - - 0.00000000000000000000000000000000000007644 145.0
BYD3_k127_7104462_17 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.00000000000000001865 85.0
BYD3_k127_7104462_18 Belongs to the bacterial ribosomal protein bL35 family K02916 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000005269 81.0
BYD3_k127_7104462_19 domain protein - - - 0.0000000285 66.0
BYD3_k127_7104462_2 Endoribonuclease that initiates mRNA decay K18682 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001672 608.0
BYD3_k127_7104462_20 exodeoxyribonuclease VII activity K03602 GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0004529,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006308,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008855,GO:0009056,GO:0009057,GO:0009318,GO:0009987,GO:0016787,GO:0016788,GO:0016796,GO:0016895,GO:0019439,GO:0032991,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901361,GO:1901575,GO:1902494 3.1.11.6 0.0000003196 57.0
BYD3_k127_7104462_21 Fibronectin type 3 domain - - - 0.000004521 59.0
BYD3_k127_7104462_22 - - - - 0.0004185 47.0
BYD3_k127_7104462_3 B3/4 domain K01890 - 6.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001055 603.0
BYD3_k127_7104462_4 May be involved in recombinational repair of damaged DNA K03631 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004312 470.0
BYD3_k127_7104462_5 PFAM Glycoside hydrolase 15-related K01178 - 3.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006896 430.0
BYD3_k127_7104462_6 Belongs to the glycosyl hydrolase 13 family K01214,K02438 - 3.2.1.196,3.2.1.68 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004739 417.0
BYD3_k127_7104462_7 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003462 359.0
BYD3_k127_7104462_8 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000419 354.0
BYD3_k127_7104462_9 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 - 6.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000663 342.0
BYD3_k127_717468_0 Protein of unknown function DUF72 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002591 361.0
BYD3_k127_717468_1 Pyridine nucleotide-disulphide oxidoreductase K00384 - 1.8.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003596 287.0
BYD3_k127_717468_2 Belongs to the UPF0312 family - - - 0.000000000000000000000000000000000000001071 157.0
BYD3_k127_717468_3 ECF sigma factor K03088 - - 0.00000000000000000000000000001332 126.0
BYD3_k127_717468_4 COG1226 Kef-type K transport systems - - - 0.000000000000000006309 88.0
BYD3_k127_717468_5 COGs COG1975 Xanthine and CO dehydrogenase maturation factor XdhC CoxF family K07402 - - 0.000000001202 66.0
BYD3_k127_7178084_0 Pyruvate phosphate dikinase, PEP/pyruvate binding domain K01006 - 2.7.9.1 0.0 1067.0
BYD3_k127_7178084_1 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 8.237e-273 859.0
BYD3_k127_7178084_10 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 GO:0003674,GO:0003824,GO:0004639,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009557 385.0
BYD3_k127_7178084_11 Trypsin K04771 - 3.4.21.107 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000515 389.0
BYD3_k127_7178084_12 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008287 376.0
BYD3_k127_7178084_13 ABC1 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001339 389.0
BYD3_k127_7178084_14 Acts as a magnesium transporter K06213 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002406 379.0
BYD3_k127_7178084_15 HEAT repeats - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000614 352.0
BYD3_k127_7178084_16 3-methyl-2-oxobutanoate hydroxymethyltransferase activity K00606 - 2.1.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002999 294.0
BYD3_k127_7178084_17 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006349 284.0
BYD3_k127_7178084_18 MOFRL family K11529 - 2.7.1.165 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001301 283.0
BYD3_k127_7178084_19 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 - 3.4.21.88 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002276 271.0
BYD3_k127_7178084_2 Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp) K01876 - 6.1.1.12 8.336e-200 646.0
BYD3_k127_7178084_20 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 - 6.3.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000006467 281.0
BYD3_k127_7178084_21 ArgK protein K07588 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001467 266.0
BYD3_k127_7178084_22 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 - 5.4.99.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000005524 263.0
BYD3_k127_7178084_23 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.00000000000000000000000000000000000000000000000000000000000000001257 228.0
BYD3_k127_7178084_24 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.000000000000000000000000000000000000000000000000000000000001567 216.0
BYD3_k127_7178084_25 CDP-alcohol phosphatidyltransferase K17103 - 2.7.8.8 0.00000000000000000000000000000000000000000000000000000007585 216.0
BYD3_k127_7178084_26 Transporter associated domain - - - 0.000000000000000000000000000000000000000000000000007128 198.0
BYD3_k127_7178084_27 Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine K01579 - 4.1.1.11 0.000000000000000000000000000000000000000003917 160.0
BYD3_k127_7178084_28 CBS domain K03699 - - 0.000000000000000000000000000000000002163 154.0
BYD3_k127_7178084_29 HD superfamily hydrolase involved in NAD metabolism K00950 - 2.7.6.3 0.000000000000000000000000000000000002363 150.0
BYD3_k127_7178084_3 Sulfate permease family K03321 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003256 633.0
BYD3_k127_7178084_30 HD superfamily hydrolase involved in NAD metabolism K00950 - 2.7.6.3 0.00000000000000000000000000000005786 137.0
BYD3_k127_7178084_31 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K02806 - - 0.000000000000000000000000005161 116.0
BYD3_k127_7178084_32 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.00000000000000000000000005529 114.0
BYD3_k127_7178084_33 histidine kinase HAMP region domain protein K03406 - - 0.00000000000000000000001505 117.0
BYD3_k127_7178084_34 Transcription factor zinc-finger K09981 - - 0.0000000000000000077 94.0
BYD3_k127_7178084_35 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.0000000000000002898 91.0
BYD3_k127_7178084_36 PFAM Cell envelope-related transcriptional attenuator domain - - - 0.000004792 57.0
BYD3_k127_7178084_4 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006237 555.0
BYD3_k127_7178084_5 Adenylosuccinate lyase C-terminus K01756 - 4.3.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001531 555.0
BYD3_k127_7178084_6 7TM receptor with intracellular HD hydrolase K07037 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006321 482.0
BYD3_k127_7178084_7 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005315 451.0
BYD3_k127_7178084_8 PhoH-like protein K06217 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006106 419.0
BYD3_k127_7178084_9 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 - 2.1.1.192 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001516 394.0
BYD3_k127_719187_0 Elongation factor G C-terminus K06207 - - 4.157e-290 904.0
BYD3_k127_719187_1 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 1.046e-245 771.0
BYD3_k127_719187_10 Pyridoxal phosphate biosynthetic protein PdxA K00097 - 1.1.1.262 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002607 324.0
BYD3_k127_719187_11 SurA N-terminal domain K03771 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000009842 284.0
BYD3_k127_719187_12 Cation efflux family K16264 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001656 261.0
BYD3_k127_719187_13 aminopeptidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000005234 259.0
BYD3_k127_719187_14 Tetratricopeptide repeat K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000001391 262.0
BYD3_k127_719187_15 Peptidase family M23 - - - 0.0000000000000000000000000000000000000000000000000000000000000000003978 247.0
BYD3_k127_719187_16 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000003033 234.0
BYD3_k127_719187_17 3-demethylubiquinone-9 3-methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000009923 223.0
BYD3_k127_719187_18 ROK family K00845 - 2.7.1.2 0.000000000000000000000000000000000000000000000000000000000000007225 247.0
BYD3_k127_719187_19 DNA alkylation repair enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000001024 224.0
BYD3_k127_719187_2 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 3.864e-224 738.0
BYD3_k127_719187_20 Aerotolerance regulator N-terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000131 238.0
BYD3_k127_719187_21 PPIC-type PPIASE domain K03770 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000003448 226.0
BYD3_k127_719187_22 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.000000000000000000000000000000000000000000000000004207 186.0
BYD3_k127_719187_23 response regulator K07782 - - 0.0000000000000000000000000000000000000000000000005542 185.0
BYD3_k127_719187_24 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.00000000000000000000000000000000000000000005154 163.0
BYD3_k127_719187_25 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.0000000000000000000000000000000000000000003425 161.0
BYD3_k127_719187_26 Belongs to the universal stress protein A family - - - 0.000000000000000000000000001319 131.0
BYD3_k127_719187_27 ErfK ybiS ycfS ynhG family protein K19234 - - 0.00000000000000000000000003718 119.0
BYD3_k127_719187_28 BON domain - - - 0.0000000000000000006868 93.0
BYD3_k127_719187_29 Y_Y_Y domain - - - 0.00000000000000003033 92.0
BYD3_k127_719187_3 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003838 527.0
BYD3_k127_719187_30 Cysteine-rich CPXCG - - - 0.000000000009104 74.0
BYD3_k127_719187_4 E1-E2 ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007566 523.0
BYD3_k127_719187_5 Transmembrane secretion effector - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001189 411.0
BYD3_k127_719187_6 histidine kinase A domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000114 410.0
BYD3_k127_719187_7 TonB-dependent Receptor Plug K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004362 364.0
BYD3_k127_719187_8 CBS domain-containing protein K03699 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003182 332.0
BYD3_k127_719187_9 Protein of unknown function DUF58 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004097 315.0
BYD3_k127_7201293_0 Amidohydrolase family K01464,K01465,K01466 - 3.5.2.2,3.5.2.3,3.5.2.5 0.0000000000000000000000000000000000000000000000000001082 190.0
BYD3_k127_7201293_1 Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K01431 - 3.5.1.6 0.0000000000000000000000000000000000000000000000705 187.0
BYD3_k127_7201293_2 Putative cyclase - - - 0.00000000000000000000000000000000000000001758 161.0
BYD3_k127_7201293_3 Carboxymuconolactone decarboxylase family - - - 0.0000000000002026 73.0
BYD3_k127_7201293_4 thioesterase - - - 0.0001812 47.0
BYD3_k127_7211450_0 Methylmalonyl-CoA mutase K01848,K11942 - 5.4.99.13,5.4.99.2 9.018e-256 807.0
BYD3_k127_7211450_1 Carboxyl transferase domain - - - 5.03e-237 747.0
BYD3_k127_7211450_10 - - - - 0.00000000000000000000000000000000000000000001993 165.0
BYD3_k127_7211450_11 ArgK protein K07588 - - 0.000000000000000000000000000000000003766 142.0
BYD3_k127_7211450_12 Ribosomal L27 protein K02899 - - 0.0000000000000000000000000000000000549 138.0
BYD3_k127_7211450_13 Sigma-70, region 4 K03088 - - 0.0000000000000000000000000000000000733 140.0
BYD3_k127_7211450_14 This protein binds to 23S rRNA in the presence of protein L20 K02888 - - 0.000000000000000000000000000002363 123.0
BYD3_k127_7211450_15 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K07025 - - 0.0000000000000000000000000001381 129.0
BYD3_k127_7211450_16 - - - - 0.0007284 46.0
BYD3_k127_7211450_2 Acyclic terpene utilisation family protein AtuA - - - 2.65e-210 666.0
BYD3_k127_7211450_3 Acyl-CoA dehydrogenase, C-terminal domain K18244 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002383 600.0
BYD3_k127_7211450_4 Ribonuclease E/G family K08300,K08301 - 3.1.26.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001145 402.0
BYD3_k127_7211450_5 RecQ zinc-binding K03654 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009328 328.0
BYD3_k127_7211450_6 B12 binding domain K01849 - 5.4.99.2 0.00000000000000000000000000000000000000000000000000000000000003945 229.0
BYD3_k127_7211450_7 translation release factor activity K03265 GO:0001666,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006950,GO:0008150,GO:0009628,GO:0016020,GO:0030312,GO:0036293,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0070482,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000005678 227.0
BYD3_k127_7211450_8 Glycerophosphoryl diester phosphodiesterase family K01126 - 3.1.4.46 0.00000000000000000000000000000000000000000000003763 178.0
BYD3_k127_7211450_9 Belongs to the enoyl-CoA hydratase isomerase family K13766 - 4.2.1.18 0.000000000000000000000000000000000000000000002287 179.0
BYD3_k127_7271699_0 Glycosyl hydrolase 36 superfamily, catalytic domain K13688 - - 0.0 3499.0
BYD3_k127_7271699_1 cellulose binding - - - 3.01e-225 700.0
BYD3_k127_7271699_10 Enoyl-(Acyl carrier protein) reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001294 306.0
BYD3_k127_7271699_11 Virulence factor BrkB K07058 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002309 282.0
BYD3_k127_7271699_12 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001322 257.0
BYD3_k127_7271699_14 Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion - - - 0.000000000000000000000000000000000000000000000000000000000000000002622 252.0
BYD3_k127_7271699_15 - - - - 0.000000000000000000000000000000000000000000000000000000008708 204.0
BYD3_k127_7271699_16 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000001565 204.0
BYD3_k127_7271699_17 DNA-templated transcription, initiation K03088 - - 0.000000000000000000000000000000000000000000000000000000103 208.0
BYD3_k127_7271699_18 Glycosyl transferase, family 2 - - - 0.000000000000000000000000000000000000000000000000000001451 207.0
BYD3_k127_7271699_19 Domain of unknown function (DUF4142) K08995 - - 0.00000000000000000000000000000000000000000000000000008682 192.0
BYD3_k127_7271699_2 MatE - - - 1.4e-213 681.0
BYD3_k127_7271699_20 transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000009868 187.0
BYD3_k127_7271699_21 involved in cell wall biogenesis - - - 0.00000000000000000000000000000000000000000000003014 180.0
BYD3_k127_7271699_22 PFAM peptidase S8 and S53, subtilisin, kexin, sedolisin K14645,K17734 - - 0.00000000000000000000000000000000000000000000003708 187.0
BYD3_k127_7271699_23 Belongs to the peptidase S8 family - - - 0.00000000000000000000000000000000000000000000004303 188.0
BYD3_k127_7271699_24 Protein of unknown function (DUF1428) K01077 - 3.1.3.1 0.00000000000000000000000000000000000000000002084 164.0
BYD3_k127_7271699_25 Protein of unknown function (DUF1460) - - - 0.00000000000000000000000000000000000000000007998 179.0
BYD3_k127_7271699_27 - - - - 0.00000000000000000000000000000000000001128 159.0
BYD3_k127_7271699_28 - - - - 0.00000000000000000000000000000000000003208 148.0
BYD3_k127_7271699_29 Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin - - - 0.00000000000000000000000000000000000004856 145.0
BYD3_k127_7271699_3 Cell wall formation K00075 - 1.3.1.98 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007462 452.0
BYD3_k127_7271699_30 negative regulation of transcription, DNA-templated - - - 0.000000000000000000000000000003916 130.0
BYD3_k127_7271699_31 helix_turn_helix multiple antibiotic resistance protein - - - 0.00000000000000000000000000001002 125.0
BYD3_k127_7271699_32 - - - - 0.000000000000000000000000005814 118.0
BYD3_k127_7271699_33 Domain of unknown function (DUF4382) - - - 0.00000000000000000000000001544 123.0
BYD3_k127_7271699_34 DinB superfamily - - - 0.0000000000000000000000002916 112.0
BYD3_k127_7271699_35 - - - - 0.0000000000000000000000003169 116.0
BYD3_k127_7271699_37 Glycogen recognition site of AMP-activated protein kinase - - - 0.00000000000000000000003872 106.0
BYD3_k127_7271699_38 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000001934 95.0
BYD3_k127_7271699_39 Acetyltransferase (GNAT) family - - - 0.000000000000000001718 95.0
BYD3_k127_7271699_4 PFAM ATP dependent DNA ligase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005758 440.0
BYD3_k127_7271699_40 Type III secretion system lipoprotein chaperone (YscW) K09914 - - 0.00000000000002418 80.0
BYD3_k127_7271699_41 6-pyruvoyl tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.0000000000000853 80.0
BYD3_k127_7271699_43 Uncharacterised nucleotidyltransferase - - - 0.0000006133 61.0
BYD3_k127_7271699_5 dna ligase K01971 - 6.5.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002603 428.0
BYD3_k127_7271699_6 Bacterial protein of unknown function (DUF899) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005118 353.0
BYD3_k127_7271699_7 protein catabolic process K03420,K13525,K17681 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000104 349.0
BYD3_k127_7271699_8 efflux transmembrane transporter activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001877 350.0
BYD3_k127_7271699_9 2-epimerase K16213 - 5.1.3.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001641 314.0
BYD3_k127_7280185_0 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000891 402.0
BYD3_k127_7280185_1 Catalyzes the synthesis of gamma-glutamylcysteine (gamma-GC). This compound is used as substrate for the biosynthesis of the low-molecular thiol compound ergothioneine K01919 - 6.3.2.2 0.000000000000000000000000000000000000000000000000006012 201.0
BYD3_k127_7280185_2 unfolded protein binding K18481 - - 0.000000000000000000000000000000000000003224 162.0
BYD3_k127_7280185_3 Histidine-specific methyltransferase, SAM-dependent - - - 0.000000000000000000000000000000000001572 141.0
BYD3_k127_7306114_0 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 2.12e-201 639.0
BYD3_k127_7306114_1 Sodium/hydrogen exchanger family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002954 390.0
BYD3_k127_7306114_10 - - - - 0.000000000000009294 85.0
BYD3_k127_7306114_11 Calcineurin-like phosphoesterase - - - 0.00000000007843 74.0
BYD3_k127_7306114_2 MoeA N-terminal region (domain I and II) K03750 - 2.10.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006311 330.0
BYD3_k127_7306114_3 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.0000000000000000000000000000000000000000001108 169.0
BYD3_k127_7306114_4 Domain of unknown function (DUF4956) - - - 0.0000000000000000000000000000000000000003279 163.0
BYD3_k127_7306114_5 PFAM CoA-binding domain protein K06929 - - 0.0000000000000000000000000000121 133.0
BYD3_k127_7306114_6 SdiA-regulated - - - 0.0000000000000000000000000001518 126.0
BYD3_k127_7306114_7 Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH K02379 - - 0.000000000000000000000000000394 124.0
BYD3_k127_7306114_8 molybdopterin-guanine dinucleotide biosynthesis protein K03753 - - 0.000000000000000746 85.0
BYD3_k127_7306114_9 - - - - 0.0000000000000009742 91.0
BYD3_k127_740856_0 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006472 444.0
BYD3_k127_740856_1 L-asparaginase II - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002398 383.0
BYD3_k127_740856_2 Carboxymuconolactone decarboxylase family K01607 - 4.1.1.44 0.0000000000000000000000000000000000000000000000000000007188 199.0
BYD3_k127_740856_3 efflux transmembrane transporter activity - - - 0.00000000000000000000000000000001627 130.0
BYD3_k127_740856_4 manually curated - - - 0.0004226 45.0
BYD3_k127_740856_5 - - - - 0.0005637 52.0
BYD3_k127_7458032_0 Aldehyde dehydrogenase family K22187 - - 2.246e-266 826.0
BYD3_k127_7458032_1 Bacterial regulatory protein, Fis family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000528 581.0
BYD3_k127_7458032_2 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002265 459.0
BYD3_k127_7458032_3 Peptidase inhibitor I9 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005548 424.0
BYD3_k127_7458032_4 Asparagine synthase K06864 - - 0.00000000000000000000000000000000000000000000000000000000000258 220.0
BYD3_k127_7458032_5 Protein of unknown function (DUF520) K09767 - - 0.0000000000000000000000000000000000000000000000001266 194.0
BYD3_k127_7458032_6 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.0000000000000000000000000000004256 132.0
BYD3_k127_7458032_7 - - - - 0.00000000000000000000000000005136 121.0
BYD3_k127_7487887_0 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006911 566.0
BYD3_k127_7487887_1 Domain in cystathionine beta-synthase and other proteins. K01697 - 4.2.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001328 573.0
BYD3_k127_7487887_10 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814 - 2.4.1.129 0.00000000000000000000000000003027 124.0
BYD3_k127_7487887_11 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.00000000000000000000000000009808 116.0
BYD3_k127_7487887_12 Ribosomal protein L34 K02914 - - 0.00000000000000002599 83.0
BYD3_k127_7487887_13 SMART zinc finger CDGSH-type domain protein - - - 0.0000003184 62.0
BYD3_k127_7487887_14 Gram-negative bacterial TonB protein C-terminal K03832 - - 0.0000003603 59.0
BYD3_k127_7487887_15 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.000307 51.0
BYD3_k127_7487887_2 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001471 567.0
BYD3_k127_7487887_3 MatE - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008783 531.0
BYD3_k127_7487887_4 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002956 398.0
BYD3_k127_7487887_5 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003311 371.0
BYD3_k127_7487887_6 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000131 369.0
BYD3_k127_7487887_7 Zn-dependent protease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003429 349.0
BYD3_k127_7487887_8 Domain of Unknown Function (DUF1080) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005828 326.0
BYD3_k127_7487887_9 Rhomboid family - - - 0.000000000000000000000000000000000002071 149.0
BYD3_k127_7510627_0 Cellulose biosynthesis protein BcsQ K03496 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006631 352.0
BYD3_k127_7510627_1 ABC transporter K02056 - 3.6.3.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003053 363.0
BYD3_k127_7510627_2 ABC transporter substrate-binding protein PnrA-like K07335 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001968 285.0
BYD3_k127_7510627_3 ParB-like nuclease domain K03497 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004111 264.0
BYD3_k127_7510627_4 NIF3 (NGG1p interacting factor 3) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001284 256.0
BYD3_k127_7510627_5 Peptidase, M23 - - - 0.000000000000000000000000811 118.0
BYD3_k127_7510627_6 Polymer-forming cytoskeletal - - - 0.00000000001223 74.0
BYD3_k127_7560370_0 Homocysteine S-methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003316 414.0
BYD3_k127_7560370_1 - - - - 0.00000000000000000000007297 105.0
BYD3_k127_7560370_2 Belongs to the universal stress protein A family - - - 0.0000000000000000000004904 108.0
BYD3_k127_7560370_3 Lysin motif - - - 0.000000000000000000002283 98.0
BYD3_k127_7672238_0 solute:proton antiporter activity K03455 - - 9.203e-212 672.0
BYD3_k127_7672238_1 Glucose / Sorbosone dehydrogenase K21430 GO:0003674,GO:0003824,GO:0005488,GO:0005509,GO:0005575,GO:0005623,GO:0008150,GO:0008152,GO:0016491,GO:0016614,GO:0016901,GO:0019842,GO:0030288,GO:0030313,GO:0031406,GO:0031975,GO:0036094,GO:0042597,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0044464,GO:0046872,GO:0048037,GO:0048038,GO:0055114,GO:0070968,GO:0097159,GO:1901363 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006603 535.0
BYD3_k127_7672238_10 CoA-binding protein K06929 - - 0.0000000000000000000000000000000000006719 145.0
BYD3_k127_7672238_11 Bacterial regulatory proteins, tetR family - GO:0000976,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0043565,GO:0044212,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1903506,GO:1990837,GO:2000112,GO:2001141 - 0.00000000000000000000000000002047 127.0
BYD3_k127_7672238_12 Transcriptional regulator - - - 0.000000000000000000000008585 109.0
BYD3_k127_7672238_13 Domain of unknown function (DUF378) K09779 - - 0.00000000000000139 81.0
BYD3_k127_7672238_14 nitrous oxide K19341 - - 0.0000000000908 72.0
BYD3_k127_7672238_15 Domain of Unknown function (DUF542) K07322 - - 0.00002545 50.0
BYD3_k127_7672238_16 Belongs to the ompA family K03286 - - 0.0003582 51.0
BYD3_k127_7672238_2 amino acid - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002712 470.0
BYD3_k127_7672238_3 glyoxalase bleomycin resistance protein dioxygenase K15975 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003997 424.0
BYD3_k127_7672238_4 luciferase family oxidoreductase, group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001023 426.0
BYD3_k127_7672238_5 PFAM Glyoxalase bleomycin resistance protein dioxygenase K15975 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001513 325.0
BYD3_k127_7672238_6 YceI-like domain - - - 0.00000000000000000000000000000000000000000000000000000002745 202.0
BYD3_k127_7672238_7 helix_turn_helix, mercury resistance K22491 - - 0.000000000000000000000000000000000000000000000006254 184.0
BYD3_k127_7672238_8 helix_turn_helix multiple antibiotic resistance protein K15973 - - 0.00000000000000000000000000000000000000002642 157.0
BYD3_k127_7672238_9 COG1575 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 - 2.5.1.74 0.0000000000000000000000000000000000005355 158.0
BYD3_k127_7678573_0 efflux transmembrane transporter activity - - - 7.6e-278 879.0
BYD3_k127_7678573_1 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000000000000000000000000005652 188.0
BYD3_k127_7678573_2 negative regulation of transcription, DNA-templated - - - 0.0000000000000000000000000000000000000009621 151.0
BYD3_k127_7678573_3 SnoaL-like domain - - - 0.0000000333 59.0
BYD3_k127_7696184_0 Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2) K11784 - 1.21.98.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008388 524.0
BYD3_k127_7696184_1 Elongator protein 3, MiaB family, Radical SAM K18285 - 2.5.1.120 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001306 512.0
BYD3_k127_7696184_10 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000878 336.0
BYD3_k127_7696184_11 Acyl transferase domain K00645 - 2.3.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005893 327.0
BYD3_k127_7696184_12 FAD dependent oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001335 325.0
BYD3_k127_7696184_13 KR domain K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001434 299.0
BYD3_k127_7696184_14 Catalyzes the dehydration of chorismate into 3- (1- carboxyvinyl)oxy benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11782 - 4.2.1.151 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006174 284.0
BYD3_k127_7696184_15 Belongs to the carbamate kinase family K00926 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006525,GO:0006527,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008804,GO:0009056,GO:0009063,GO:0009064,GO:0009065,GO:0009987,GO:0016054,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0019546,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046395,GO:0071704,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 2.7.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000002191 259.0
BYD3_k127_7696184_16 NDK K00940 - 2.7.4.6 0.000000000000000000000000000000000000000000000000000155 190.0
BYD3_k127_7696184_17 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770 - 4.6.1.12 0.0000000000000000000000000000000000000000005501 172.0
BYD3_k127_7696184_18 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.00000000000000000000000000005242 120.0
BYD3_k127_7696184_19 Uncharacterised protein family (UPF0182) K09118 - - 0.00000000000000000000000000007798 135.0
BYD3_k127_7696184_2 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006956 510.0
BYD3_k127_7696184_20 SNARE associated Golgi protein - - - 0.0000000000000000000000000003609 130.0
BYD3_k127_7696184_21 Putative ABC exporter - - - 0.000000000000000000000000009858 116.0
BYD3_k127_7696184_22 Uncharacterized ACR, COG1399 K07040 - - 0.00000000000000000000000002389 113.0
BYD3_k127_7696184_23 Belongs to the bacterial ribosomal protein bL32 family K02911 GO:0000027,GO:0000302,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006950,GO:0006979,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009628,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042221,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0050896,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1901700,GO:1990904 - 0.000000000000001198 78.0
BYD3_k127_7696184_3 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002256 515.0
BYD3_k127_7696184_4 Phosphoglucomutase/phosphomannomutase, C-terminal domain K15778 - 5.4.2.2,5.4.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002949 484.0
BYD3_k127_7696184_5 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002815 450.0
BYD3_k127_7696184_6 Phage integrase, N-terminal SAM-like domain K04763 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001312 397.0
BYD3_k127_7696184_7 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003408 390.0
BYD3_k127_7696184_8 proton-translocating NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006559 349.0
BYD3_k127_7696184_9 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006983 338.0
BYD3_k127_7724557_0 involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003106 472.0
BYD3_k127_7724557_1 PFAM phenylalanine histidine ammonia-lyase K01745 - 4.3.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002032 426.0
BYD3_k127_7724557_10 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.00000000000000000000000000000000000000000000001122 174.0
BYD3_k127_7724557_11 Biopolymer transport protein ExbD/TolR K03559,K03560 - - 0.00000000000000000000000000000000000000006604 155.0
BYD3_k127_7724557_12 OmpA family K03640 - - 0.0000000000000000000000000000000000001042 149.0
BYD3_k127_7724557_13 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.000000000000000000000000000000000007841 159.0
BYD3_k127_7724557_14 TonB C terminal K03832 - - 0.000000000000000000000002593 115.0
BYD3_k127_7724557_15 Domain of unknown function (DUF4321) - - - 0.000000000000000000002428 100.0
BYD3_k127_7724557_16 cellulase activity K06882 - - 0.0000000000000000004193 99.0
BYD3_k127_7724557_17 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - GO:0005575,GO:0005623,GO:0008150,GO:0009987,GO:0016043,GO:0022607,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043933,GO:0044085,GO:0044464,GO:0051259,GO:0051260,GO:0051301,GO:0065003,GO:0071840 - 0.000000000001481 78.0
BYD3_k127_7724557_18 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.000000000003871 69.0
BYD3_k127_7724557_19 Tetratricopeptide repeat - - - 0.000001916 61.0
BYD3_k127_7724557_2 Creatinase/Prolidase N-terminal domain K01262 - 3.4.11.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002713 356.0
BYD3_k127_7724557_3 Polyprenyl synthetase K02523 - 2.5.1.90 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008081 352.0
BYD3_k127_7724557_4 SurA N-terminal domain K03770 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001579 351.0
BYD3_k127_7724557_5 3-beta hydroxysteroid dehydrogenase/isomerase family K01784 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000165 317.0
BYD3_k127_7724557_6 WD40-like Beta Propeller Repeat K03641 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004778 301.0
BYD3_k127_7724557_7 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000005274 247.0
BYD3_k127_7724557_8 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000005501 210.0
BYD3_k127_7724557_9 MotA/TolQ/ExbB proton channel family K03562 - - 0.00000000000000000000000000000000000000000000000000000004655 203.0
BYD3_k127_7752775_0 Patatin-like phospholipase K07001 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001445 428.0
BYD3_k127_7752775_1 UPF0316 protein - - - 0.000000000000000000000000000000000000000000004474 175.0
BYD3_k127_7752775_2 Dodecin K09165 - - 0.000000000000000000000001047 105.0
BYD3_k127_7752775_3 negative regulation of transcription, DNA-templated - - - 0.00000000021 63.0
BYD3_k127_780295_0 domain, Protein - - - 1.103e-268 843.0
BYD3_k127_780295_1 amine dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001676 490.0
BYD3_k127_780295_10 Polyketide cyclase / dehydrase and lipid transport - - - 0.0000000000000000000000006563 114.0
BYD3_k127_780295_11 Acetyltransferase (GNAT) family - - - 0.000000000000000000000004708 104.0
BYD3_k127_780295_12 - - - - 0.00000000000000000000002254 108.0
BYD3_k127_780295_13 - - - - 0.000000000000003373 86.0
BYD3_k127_780295_14 - - - - 0.0000000000001684 73.0
BYD3_k127_780295_16 Membrane K09807 GO:0005575,GO:0005623,GO:0042597,GO:0044464 - 0.00007896 53.0
BYD3_k127_780295_2 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.00000000000000000000000000000000000000000000000000000000000000000002596 237.0
BYD3_k127_780295_3 Protein of unknown function, DUF488 - - - 0.000000000000000000000000000000000000000000000002536 179.0
BYD3_k127_780295_4 YjbR - - - 0.00000000000000000000000000000000000000000000544 174.0
BYD3_k127_780295_5 Domain of unknown function (DU1801) - - - 0.000000000000000000000000000000000000000000009719 166.0
BYD3_k127_780295_6 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000671 163.0
BYD3_k127_780295_7 acetyltransferase K22441 - 2.3.1.57 0.0000000000000000000000000000000001758 146.0
BYD3_k127_780295_8 - - - - 0.000000000000000000000000000000266 124.0
BYD3_k127_780295_9 Predicted membrane protein (DUF2214) K08983 - - 0.00000000000000000000000001488 115.0
BYD3_k127_7809359_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 2.882e-269 840.0
BYD3_k127_7809359_1 Sigma-54 factor, Activator interacting domain (AID) K03092 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007895 493.0
BYD3_k127_7809359_2 ABC transporter K06861 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009114 401.0
BYD3_k127_7809359_3 ABC transporter K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001897 334.0
BYD3_k127_7809359_4 Putative ABC exporter - - - 0.00000000000000000000000000000000000000000000000000000000002704 220.0
BYD3_k127_7809359_5 - - - - 0.00000000000000000000000000000000006346 150.0
BYD3_k127_7809359_6 Lipopolysaccharide-assembly, LptC-related - - - 0.0000000000000000000002813 112.0
BYD3_k127_7840185_0 protein kinase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002744 421.0
BYD3_k127_7840185_1 Serine/Threonine protein kinases, catalytic domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002009 363.0
BYD3_k127_7969201_0 Polysaccharide biosynthesis/export protein - - - 3.285e-255 814.0
BYD3_k127_7969201_1 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 GO:0001130,GO:0001131,GO:0001141,GO:0001217,GO:0002161,GO:0002196,GO:0003674,GO:0003700,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006355,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006450,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009451,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016070,GO:0016597,GO:0016787,GO:0016788,GO:0016874,GO:0016875,GO:0019219,GO:0019222,GO:0019538,GO:0019752,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0042802,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045892,GO:0045934,GO:0046483,GO:0046872,GO:0046914,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0052689,GO:0060255,GO:0065007,GO:0065008,GO:0071704,GO:0080090,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:0140110,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 6.1.1.7 1.063e-226 732.0
BYD3_k127_7969201_10 PFAM Methyltransferase type 11 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001045 281.0
BYD3_k127_7969201_11 PFAM sugar transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000002821 247.0
BYD3_k127_7969201_12 PFAM glycosyl transferase group 1 K12995 - 2.4.1.348 0.000000000000000000000000000000000000000000000000000000000007242 223.0
BYD3_k127_7969201_13 Hexapeptide repeat of succinyl-transferase - - - 0.0000000000000000000000000000000000000000000000000000000002295 223.0
BYD3_k127_7969201_14 ZIP Zinc transporter K07238,K11021,K16267 - - 0.0000000000000000000000000000000000000000000000000000001243 202.0
BYD3_k127_7969201_15 Glycosyl transferase 4-like - - - 0.00000000000000000000000000000000000000000000000000004486 210.0
BYD3_k127_7969201_16 protein tyrosine phosphatase activity K01104 - 3.1.3.48 0.000000000000000000000000000000000000000000000009718 184.0
BYD3_k127_7969201_17 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000001564 156.0
BYD3_k127_7969201_18 PFAM glycosyl transferase group 1 - - - 0.000000000000000000000000000000000226 147.0
BYD3_k127_7969201_19 Late embryogenesis abundant protein - - - 0.000000000000000000000003324 112.0
BYD3_k127_7969201_2 MgsA AAA+ ATPase C terminal K07478 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006105 603.0
BYD3_k127_7969201_20 Modulates the polysaccharide chain length of enterobacterial common antigen (ECA) - - - 0.00000000000001548 85.0
BYD3_k127_7969201_21 Modulates RecA activity K03565 - - 0.00000000003106 72.0
BYD3_k127_7969201_3 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002865 455.0
BYD3_k127_7969201_4 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011 402.0
BYD3_k127_7969201_5 DegT/DnrJ/EryC1/StrS aminotransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005445 381.0
BYD3_k127_7969201_6 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007092 364.0
BYD3_k127_7969201_7 Asparagine synthase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006143 366.0
BYD3_k127_7969201_8 Probable RNA and SrmB- binding site of polymerase A K00974 - 2.7.7.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003405 312.0
BYD3_k127_7969201_9 KR domain K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001477 284.0
BYD3_k127_8107898_0 C4-dicarboxylate anaerobic carrier - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004457 484.0
BYD3_k127_8107898_1 TIGRFAM molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 - - 0.00000000000000000000000000000000000000000000000002163 192.0
BYD3_k127_8107898_2 COG0526 Thiol-disulfide isomerase and thioredoxins K03672 - 1.8.1.8 0.00000000000000000000000000000000009467 141.0
BYD3_k127_8107898_3 Yip1 domain - - - 0.00000000000000000000000000000008485 135.0
BYD3_k127_8107898_4 PFAM CutA1 divalent ion tolerance protein K03926 - - 0.0000000000000000000000000269 113.0
BYD3_k127_8107898_5 FR47-like protein K03789 - 2.3.1.128 0.0003573 49.0
BYD3_k127_8149815_0 Ion transport protein K10716 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000486 385.0
BYD3_k127_8149815_1 PFAM Integrase catalytic K07497 - - 0.000000000000000000000000000000000000000000000005849 178.0
BYD3_k127_8149815_2 PFAM transposase IS3 IS911 family protein K07483 - - 0.0000000000000000000000000000000001213 144.0
BYD3_k127_8149815_3 Phytanoyl-CoA dioxygenase (PhyH) - - - 0.0000001751 63.0
BYD3_k127_8149815_4 Putative transposase - - - 0.00001996 51.0
BYD3_k127_8182760_0 AMP-binding enzyme C-terminal domain K01907 - 6.2.1.16 4.574e-264 830.0
BYD3_k127_8182760_1 homogentisate 1,2-dioxygenase K00451 - 1.13.11.5 1.19e-233 730.0
BYD3_k127_8182760_2 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal K00457 - 1.13.11.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003269 588.0
BYD3_k127_8182760_3 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004533 340.0
BYD3_k127_8182760_4 Sigma-70 region 2 K03088 - - 0.00000000000000000000000000000000008895 142.0
BYD3_k127_8182760_5 - - - - 0.00000000252 61.0
BYD3_k127_8182760_6 TonB-dependent receptor - - - 0.000007771 58.0
BYD3_k127_8203628_0 protein kinase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000164 329.0
BYD3_k127_8203628_1 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.00000000000000000000000000000000000000000000000000001379 196.0
BYD3_k127_8203628_2 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000314 197.0
BYD3_k127_8203628_3 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000000000000003745 160.0
BYD3_k127_8203628_4 Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring K01935 GO:0003674,GO:0003824,GO:0004141,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0016882,GO:0017144,GO:0018130,GO:0019752,GO:0032787,GO:0034641,GO:0042364,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.3.3 0.00000000000000000002064 101.0
BYD3_k127_821044_0 DNA restriction-modification system - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002406 372.0
BYD3_k127_821044_1 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002235 311.0
BYD3_k127_821044_2 microcin C7 resistance K01297 - 3.4.17.13 0.000000000000000000000000000000000000000000000000000000000000000000000002353 268.0
BYD3_k127_821044_3 TonB dependent receptor K16089 - - 0.000000000000000000000000000000000000000000000000000000000000000000000003958 267.0
BYD3_k127_821044_4 Glycosyl transferase family 21 K00721 - 2.4.1.83 0.000000000000000000000000000000000000000000000000000000000000000000838 247.0
BYD3_k127_821044_5 CbiX - - - 0.00000000000000000000000000000000000000000000000002926 201.0
BYD3_k127_821044_6 alpha/beta hydrolase fold - - - 0.00000000000009066 75.0
BYD3_k127_8219575_0 malic enzyme K00027,K00029,K00625,K13788 GO:0003674,GO:0003824,GO:0004470,GO:0004473,GO:0005488,GO:0008150,GO:0008152,GO:0016491,GO:0016614,GO:0016615,GO:0016616,GO:0030145,GO:0043167,GO:0043169,GO:0046872,GO:0046914,GO:0055114 1.1.1.38,1.1.1.40,2.3.1.8 1.692e-261 828.0
BYD3_k127_8219575_1 Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA K01610 - 4.1.1.49 2.476e-214 683.0
BYD3_k127_8219575_10 diguanylate cyclase K02488 - 2.7.7.65 0.00000000000000000000000000000000000000000000000000000001752 216.0
BYD3_k127_8219575_11 ROK family K00845 - 2.7.1.2 0.0000000000000000000000000000000000000000000000000002046 188.0
BYD3_k127_8219575_12 - - - - 0.000000000000000000008426 103.0
BYD3_k127_8219575_13 SMART Peptidase, metallopeptidase - - - 0.0001171 52.0
BYD3_k127_8219575_2 Cys/Met metabolism PLP-dependent enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001244 465.0
BYD3_k127_8219575_3 Metal dependent phosphohydrolases with conserved 'HD' motif. K06885 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003329 365.0
BYD3_k127_8219575_4 Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002096 348.0
BYD3_k127_8219575_5 Histidine kinase-like ATPases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001267 356.0
BYD3_k127_8219575_6 Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin K01151 - 3.1.21.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007146 327.0
BYD3_k127_8219575_7 ABC transporter K09812 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001067 263.0
BYD3_k127_8219575_8 Part of the ABC transporter FtsEX involved in K09811 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001185 266.0
BYD3_k127_8219575_9 Peptidase family M23 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003675 260.0
BYD3_k127_823592_0 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008728 356.0
BYD3_k127_823592_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000001235 246.0
BYD3_k127_823592_2 - - - - 0.0000000000000000000000000000000000000000000004342 192.0
BYD3_k127_823592_3 hydrolase of the alpha beta-hydrolase fold K07020 - - 0.00000000000000000000000000000000000000000124 166.0
BYD3_k127_823592_4 phosphorelay signal transduction system - - - 0.000000000000000000000000002281 130.0
BYD3_k127_825267_0 Biotin carboxylase C-terminal domain K01961 - 6.3.4.14,6.4.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002723 484.0
BYD3_k127_825267_1 Ribosomal protein S2 K02967 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001591 353.0
BYD3_k127_825267_10 Ribosomal protein S9/S16 K02996 - - 0.00000000000000000000000000000000000000000000000002818 189.0
BYD3_k127_825267_11 Cytidylyltransferase family K00981 - 2.7.7.41 0.0000000000000000000000000000000000000000000001356 183.0
BYD3_k127_825267_12 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 - - 0.00000000000000000000000000000368 123.0
BYD3_k127_825267_13 Biotin-requiring enzyme - - - 0.0000000000000000000000000004355 131.0
BYD3_k127_825267_2 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002398 336.0
BYD3_k127_825267_3 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006721,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016114,GO:0016491,GO:0016614,GO:0016616,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0030145,GO:0030604,GO:0032787,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046490,GO:0046872,GO:0046914,GO:0048037,GO:0050661,GO:0050662,GO:0051483,GO:0051484,GO:0055114,GO:0070402,GO:0071704,GO:0090407,GO:0097159,GO:1901135,GO:1901265,GO:1901363,GO:1901576 1.1.1.267 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004014 334.0
BYD3_k127_825267_4 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005096 306.0
BYD3_k127_825267_5 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002206 265.0
BYD3_k127_825267_6 tRNA (Uracil-5-)-methyltransferase K03215 - 2.1.1.190 0.000000000000000000000000000000000000000000000000000000000000000000000000000368 273.0
BYD3_k127_825267_7 Peptidase family M50 K11749 - - 0.00000000000000000000000000000000000000000000000000000000000000003078 244.0
BYD3_k127_825267_8 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.00000000000000000000000000000000000000000000000000000000000002442 218.0
BYD3_k127_825267_9 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 - - 0.000000000000000000000000000000000000000000000000000000000001991 222.0
BYD3_k127_8260805_0 ATPase family associated with various cellular activities (AAA) K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005168 416.0
BYD3_k127_8260805_1 CHAT domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006322 406.0
BYD3_k127_8260805_2 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.0000000000000000000000000000000000000000000000000000000000000000002945 244.0
BYD3_k127_8260805_4 FG-GAP repeat protein - - - 0.00000000000000001179 96.0
BYD3_k127_8260805_5 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.0000004147 56.0
BYD3_k127_8260805_6 function for this protein is to guide the assembly of the membrane sector of the ATPase enzyme complex K02116 - - 0.0000009194 55.0
BYD3_k127_8260805_7 - - - - 0.000004375 59.0
BYD3_k127_8260805_8 - - - - 0.0009907 51.0
BYD3_k127_8268331_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 0.0 1203.0
BYD3_k127_8268331_1 Belongs to the CarB family K01955 - 6.3.5.5 6.082e-268 845.0
BYD3_k127_8268331_10 RadC-like JAB domain K03630 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001253 246.0
BYD3_k127_8268331_11 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 GO:0000309,GO:0003674,GO:0003824,GO:0004515,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0040007,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.7.18 0.000000000000000000000000000000000000000005623 162.0
BYD3_k127_8268331_12 Tetratricopeptide repeat - - - 0.0000000000000000000000000000004646 138.0
BYD3_k127_8268331_13 Multicopper oxidase - - - 0.0000000000000000000000000000007012 140.0
BYD3_k127_8268331_14 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K05807 - - 0.0000000004954 70.0
BYD3_k127_8268331_2 Oxidoreductase family, C-terminal alpha/beta domain K13020 - 1.1.1.335 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001286 591.0
BYD3_k127_8268331_3 UDP binding domain K13015 - 1.1.1.136 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001197 572.0
BYD3_k127_8268331_4 UDP binding domain K00012 - 1.1.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005124 520.0
BYD3_k127_8268331_5 DegT/DnrJ/EryC1/StrS aminotransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002288 492.0
BYD3_k127_8268331_6 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004025 415.0
BYD3_k127_8268331_7 phosphatidate phosphatase activity K09474,K19302 - 3.1.3.2,3.6.1.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001776 314.0
BYD3_k127_8268331_8 phosphatidate phosphatase activity K09474,K19302 - 3.1.3.2,3.6.1.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002567 304.0
BYD3_k127_8268331_9 O-acyltransferase activity K13018 - 2.3.1.201 0.000000000000000000000000000000000000000000000000000000000000000000000000000001303 274.0
BYD3_k127_8284029_0 Aldehyde dehydrogenase family K00140,K22187 - 1.2.1.18,1.2.1.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005144 556.0
BYD3_k127_8284029_1 Aminotransferase class-III - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003438 555.0
BYD3_k127_8284029_2 Peptidase family S58 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002855 469.0
BYD3_k127_8284029_3 Alpha/beta hydrolase family K01563 - 3.8.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000009128 287.0
BYD3_k127_8284029_4 transcriptional regulator - - - 0.000000000000000000000000000000003573 136.0
BYD3_k127_8284029_5 Methylase involved in ubiquinone menaquinone biosynthesis - - - 0.0000000000000000000000623 107.0
BYD3_k127_8337566_0 Carbamoyl-phosphate synthetase large chain, oligomerisation domain K01955 - 6.3.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003562 599.0
BYD3_k127_8337566_1 Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose K01711 - 4.2.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002202 499.0
BYD3_k127_8337566_10 Ribosomal protein L17 K02879 - - 0.00000000000000000000000000000000000000000838 156.0
BYD3_k127_8337566_11 Belongs to the bacterial ribosomal protein bL28 family K02902 - - 0.000000000000000000005875 96.0
BYD3_k127_8337566_12 Ribosomal protein L36 K02919 - - 0.0000000000000001559 79.0
BYD3_k127_8337566_13 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.00001606 54.0
BYD3_k127_8337566_2 electron transfer activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005238 452.0
BYD3_k127_8337566_3 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 - 2.7.7.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001337 447.0
BYD3_k127_8337566_4 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002156 295.0
BYD3_k127_8337566_5 Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily K17828 - 1.3.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000007249 267.0
BYD3_k127_8337566_6 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 - - 0.00000000000000000000000000000000000000000000000000000000004795 206.0
BYD3_k127_8337566_7 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 - - 0.0000000000000000000000000000000000000000000000000000000009645 203.0
BYD3_k127_8337566_8 RmlD substrate binding domain K15856 - 1.1.1.281 0.0000000000000000000000000000000000000000000000000000007486 204.0
BYD3_k127_8337566_9 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 - 4.1.1.23 0.0000000000000000000000000000000000000000000004005 176.0
BYD3_k127_8415751_0 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003084 580.0
BYD3_k127_8415751_1 Phage integrase, N-terminal SAM-like domain K03733 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008971 312.0
BYD3_k127_8415751_2 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 - 3.4.25.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000003762 259.0
BYD3_k127_8415751_3 protein kinase activity K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000001208 245.0
BYD3_k127_8415751_4 phosphorelay signal transduction system - - - 0.0000000000000000000000000000000000000000000000000000000000000009899 244.0
BYD3_k127_8415751_7 Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs K04094 - 2.1.1.74 0.0002964 44.0
BYD3_k127_8464364_0 TonB dependent receptor - - - 1.935e-232 749.0
BYD3_k127_8464364_1 5'-nucleotidase, C-terminal domain K01081 - 3.1.3.5 1.143e-218 720.0
BYD3_k127_8464364_10 HAMP domain K07636 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005849 344.0
BYD3_k127_8464364_11 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005345 325.0
BYD3_k127_8464364_12 Transcriptional regulatory protein, C terminal K07657 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001724 306.0
BYD3_k127_8464364_13 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005654 300.0
BYD3_k127_8464364_14 Phosphate transport system permease protein PstA K02038 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003661 295.0
BYD3_k127_8464364_15 The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate K03783 - 2.4.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006478 300.0
BYD3_k127_8464364_16 Phosphomethylpyrimidine kinase K00941 - 2.7.1.49,2.7.4.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001483 284.0
BYD3_k127_8464364_17 negative regulation of phosphate transmembrane transport K02039 GO:0000287,GO:0001558,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006873,GO:0006950,GO:0007154,GO:0008150,GO:0009266,GO:0009267,GO:0009268,GO:0009405,GO:0009408,GO:0009605,GO:0009628,GO:0009892,GO:0009987,GO:0009991,GO:0010468,GO:0010563,GO:0010605,GO:0010629,GO:0010966,GO:0016020,GO:0016036,GO:0019220,GO:0019222,GO:0019725,GO:0019897,GO:0019898,GO:0022898,GO:0030002,GO:0030145,GO:0030320,GO:0030643,GO:0031323,GO:0031324,GO:0031667,GO:0031668,GO:0031669,GO:0032409,GO:0032410,GO:0032412,GO:0032413,GO:0032879,GO:0033554,GO:0034605,GO:0034762,GO:0034763,GO:0034765,GO:0034766,GO:0040008,GO:0042221,GO:0042592,GO:0042594,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0043269,GO:0043271,GO:0044070,GO:0044092,GO:0044419,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0045936,GO:0046677,GO:0046872,GO:0046914,GO:0046983,GO:0048519,GO:0048523,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050896,GO:0051049,GO:0051051,GO:0051128,GO:0051174,GO:0051704,GO:0051716,GO:0055062,GO:0055081,GO:0055082,GO:0055083,GO:0060255,GO:0065007,GO:0065008,GO:0065009,GO:0070887,GO:0071214,GO:0071236,GO:0071467,GO:0071496,GO:0071944,GO:0072501,GO:0072502,GO:0072505,GO:0072506,GO:0098771,GO:0104004,GO:1903792,GO:1903795,GO:1903796,GO:1903959,GO:1903960,GO:2000185,GO:2000186 - 0.000000000000000000000000000000000000000000000000000000000000000000001123 245.0
BYD3_k127_8464364_18 Zn peptidase - - - 0.000000000000000000000000000000000000000000000000000000000231 226.0
BYD3_k127_8464364_19 Peptidase family M48 - - - 0.000000000000000000000000000000000000000000000000000000008934 212.0
BYD3_k127_8464364_2 domain, Protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006137 453.0
BYD3_k127_8464364_20 RNA 2'-O ribose methyltransferase substrate binding K03437 - - 0.00000000000000000000000000000000000000000000000000000006598 208.0
BYD3_k127_8464364_21 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.00000000000000000000000000000000000000000000000000001566 201.0
BYD3_k127_8464364_22 - - - - 0.0000000000000000000000000003132 126.0
BYD3_k127_8464364_23 membrane transporter protein K07090 - - 0.00000000000000000006737 103.0
BYD3_k127_8464364_24 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - 0.0000000000000000001747 101.0
BYD3_k127_8464364_25 Heat shock protein HtpX K03799 - - 0.000000000000002189 89.0
BYD3_k127_8464364_26 PFAM Phosphate-selective porin O and P - - - 0.0000000000266 75.0
BYD3_k127_8464364_27 DNA-binding transcription factor activity K03892 GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006139,GO:0006351,GO:0006355,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0031323,GO:0031326,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0042221,GO:0043170,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0046685,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1903506,GO:2000112,GO:2001141 - 0.000000001207 70.0
BYD3_k127_8464364_28 - - - - 0.000005466 51.0
BYD3_k127_8464364_3 Ppx/GppA phosphatase family K01524 - 3.6.1.11,3.6.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000165 424.0
BYD3_k127_8464364_4 Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family K03317 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005192 406.0
BYD3_k127_8464364_5 Belongs to the aldehyde dehydrogenase family K00128 - 1.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009373 376.0
BYD3_k127_8464364_6 TIGRFAM phosphate ABC transporter, phosphate-binding protein K02040 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001236 377.0
BYD3_k127_8464364_7 Adenosine/AMP deaminase K01488 - 3.5.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001537 361.0
BYD3_k127_8464364_8 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002512 350.0
BYD3_k127_8464364_9 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000698 331.0
BYD3_k127_8524833_0 Belongs to the NiFe NiFeSe hydrogenase large subunit family K06281 - 1.12.99.6 2.546e-244 769.0
BYD3_k127_8524833_1 Belongs to the carbamoyltransferase HypF family K04656 - - 7.796e-199 654.0
BYD3_k127_8524833_10 Hexapeptide repeat of succinyl-transferase K00661 - 2.3.1.79 0.0000000000000000000000000000000000000000000000000000000000000000002356 234.0
BYD3_k127_8524833_11 CobW/HypB/UreG, nucleotide-binding domain K04652 - - 0.00000000000000000000000000000000000000000000000000000000000000000458 235.0
BYD3_k127_8524833_12 COG1670 acetyltransferases, including N-acetylases of ribosomal proteins K01870 - 6.1.1.5 0.00000000000000000000000000000000000000000000000000000000000000257 224.0
BYD3_k127_8524833_13 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000000000000000000000000000000000000000000000000002234 190.0
BYD3_k127_8524833_14 respiratory electron transport chain K03620 GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006091,GO:0006113,GO:0008150,GO:0008152,GO:0009061,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0020037,GO:0031224,GO:0031226,GO:0032991,GO:0044237,GO:0044425,GO:0044459,GO:0044464,GO:0044569,GO:0045333,GO:0046906,GO:0048037,GO:0055114,GO:0071944,GO:0097159,GO:1901363,GO:1902494 - 0.000000000000000000000000000000000000000000000000001131 205.0
BYD3_k127_8524833_15 Cupin domain - - - 0.00000000000000000000000000000000000000000000000002849 184.0
BYD3_k127_8524833_16 Belongs to the NiCoT transporter (TC 2.A.52) family - - - 0.000000000000000000000000000000000000000000003576 171.0
BYD3_k127_8524833_17 Hydrogenase formation hypA family K04654 - - 0.000000000000000000000000000000000000004625 148.0
BYD3_k127_8524833_18 YjbR - - - 0.0000000000000000000000000000000000006601 144.0
BYD3_k127_8524833_19 - - - - 0.0000000000000000000000000000007746 127.0
BYD3_k127_8524833_2 COG0457 FOG TPR repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004838 486.0
BYD3_k127_8524833_20 PFAM peptidase M52 hydrogen uptake protein K03605 - - 0.000000000000000000000000000000776 128.0
BYD3_k127_8524833_21 Protein of unknown function (DUF4241) - - - 0.000000000000000000000000000007803 132.0
BYD3_k127_8524833_22 AraC-like ligand binding domain - - - 0.0000000000000000000000000001747 119.0
BYD3_k127_8524833_23 Acetyltransferase (GNAT) domain K03790 - 2.3.1.128 0.0000000000000000000000000003222 123.0
BYD3_k127_8524833_24 - - - - 0.000000000000000000000000006725 119.0
BYD3_k127_8524833_25 Acetyltransferase (isoleucine patch K00661 - 2.3.1.79 0.0000000000000000000004677 104.0
BYD3_k127_8524833_26 Protein of unknown function (DUF3574) - - - 0.000000000000000000006696 97.0
BYD3_k127_8524833_27 HupF/HypC family K04653 - - 0.00000000000000000001064 106.0
BYD3_k127_8524833_28 - - - - 0.0000000000000000004199 95.0
BYD3_k127_8524833_29 - - - - 0.0000000000000004844 79.0
BYD3_k127_8524833_3 small subunit K06282 - 1.12.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008875 434.0
BYD3_k127_8524833_30 Protein of unknown function (DUF2892) - - - 0.0000000002437 69.0
BYD3_k127_8524833_31 Maltose acetyltransferase K00633,K00661 - 2.3.1.18,2.3.1.79 0.0000009537 55.0
BYD3_k127_8524833_4 Hydrogenase formation hypA family K04654 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002278 392.0
BYD3_k127_8524833_5 amidohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007448 369.0
BYD3_k127_8524833_6 TIGRFAM hydrogenase expression formation protein HypE K04655 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005406 383.0
BYD3_k127_8524833_7 Putative esterase K07017 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002181 327.0
BYD3_k127_8524833_8 DinB superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001109 272.0
BYD3_k127_8524833_9 Pyridoxamine 5'-phosphate oxidase K00275 - 1.4.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000135 246.0
BYD3_k127_8531819_0 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase K02564 - 3.5.99.6 3.393e-247 782.0
BYD3_k127_8531819_1 Peptidase family M28 - - - 5.264e-205 650.0
BYD3_k127_8531819_2 Pyridoxal-dependent decarboxylase conserved domain K13745 - 4.1.1.86 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003114 571.0
BYD3_k127_8531819_3 COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit K00499,K16319 - 1.14.12.1,1.14.15.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000183 379.0
BYD3_k127_8531819_4 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid K17837 - 3.5.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000004179 297.0
BYD3_k127_8531819_5 membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000008777 240.0
BYD3_k127_8531819_6 - - - - 0.0000000000000003218 88.0
BYD3_k127_8566261_0 PFAM NAD dependent epimerase dehydratase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001327 484.0
BYD3_k127_8566261_1 Glucose-1-phosphate cytidylyltransferase K00978 - 2.7.7.33 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003465 435.0
BYD3_k127_8566261_2 PFAM Glycosyl transferase, group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000002412 244.0
BYD3_k127_8566261_3 PFAM Glycosyl transferase, group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000002691 244.0
BYD3_k127_8566261_4 Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose K00067,K01790 - 1.1.1.133,5.1.3.13 0.00000000000000000000000000000000000000000000000000000000001484 213.0
BYD3_k127_8566261_5 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000000000000000000000000000003323 190.0
BYD3_k127_8566261_6 glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000002758 168.0
BYD3_k127_8573038_0 Asparagine synthase K01953 - 6.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001539 539.0
BYD3_k127_8573038_1 transferase activity, transferring glycosyl groups - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001497 357.0
BYD3_k127_8573038_2 Heparinase II/III N-terminus - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001072 332.0
BYD3_k127_8573038_3 PFAM Glycosyl transferase, group 1 - - - 0.00000000000000000000000000000000000000000002811 167.0
BYD3_k127_8573038_4 Zinc-binding dehydrogenase - - - 0.00000000000000000000000000000000000000001554 157.0
BYD3_k127_8592013_0 B3/4 domain K01890 - 6.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000166 456.0
BYD3_k127_8592013_1 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 - 6.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007058 317.0
BYD3_k127_8603735_0 efflux transmembrane transporter activity - - - 2.379e-214 700.0
BYD3_k127_8603735_1 efflux transmembrane transporter activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004618 422.0
BYD3_k127_8603735_2 efflux transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004501 368.0
BYD3_k127_8603735_3 DNA ligase K01971 - 6.5.1.1 0.000000000000000000000000000000000000000000000000000000000000000000001687 243.0
BYD3_k127_8603735_4 Permease MlaE K02066 - - 0.0000000000000000000000000000000000000000000000000000006478 211.0
BYD3_k127_8603735_5 negative regulation of transcription, DNA-templated - - - 0.0000000000000000000000000000000000000000000000000001972 186.0
BYD3_k127_8603735_6 negative regulation of transcription, DNA-templated - - - 0.000000000000000000000000000000000000000000000002416 176.0
BYD3_k127_8603735_7 Transcriptional regulator PadR-like family - - - 0.00000000000000000000000000000000000000000007595 162.0
BYD3_k127_8603735_8 efflux transmembrane transporter activity K02004 - - 0.00000000000000000009332 106.0
BYD3_k127_8603735_9 Outer membrane protein beta-barrel domain - - - 0.000000000000003526 84.0
BYD3_k127_8756815_0 efflux transmembrane transporter activity - - - 5.979e-283 892.0
BYD3_k127_8756815_1 Metallopeptidase family M24 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002808 383.0
BYD3_k127_8756815_2 Multicopper oxidase K00368 - 1.7.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000001191 276.0
BYD3_k127_8756815_3 hydrolase of the alpha beta superfamily K07017 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003755 261.0
BYD3_k127_8756815_4 Regulator of chromosome condensation (RCC1) repeat - - - 0.000000000000000000000000000000000000000000000000000000002122 216.0
BYD3_k127_8756815_5 - - - - 0.000000000000000000000000000000000000000000000000003106 191.0
BYD3_k127_8756815_6 - - - - 0.000000000000000000000000000000000000009521 151.0
BYD3_k127_8756815_7 Glucose / Sorbosone dehydrogenase K21430 - - 0.0000000000000000000000000000003408 128.0
BYD3_k127_8756815_8 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.000000000000000000000000000002355 139.0
BYD3_k127_8793745_0 Catalyzes a proton abstraction reaction that results in 2,5-elimination of pyruvate from 2-succinyl-5-enolpyruvyl-6- hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC) and the formation of 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate (SHCHC) K08680 - 4.2.99.20 0.00000000000000000000000000000000000000000000000000004512 198.0
BYD3_k127_8793745_1 hydrolase activity, acting on ester bonds - - - 0.0000000000000003918 87.0
BYD3_k127_8798149_0 Domain of unknown function (DUF4388) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005825 461.0
BYD3_k127_8798149_1 Bacterial dnaA protein K02313 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001347 412.0
BYD3_k127_8798149_10 Catalyzes cross-linking of the peptidoglycan cell wall at the division septum K03587 - 3.4.16.4 0.0000000000001309 80.0
BYD3_k127_8798149_11 Roadblock/LC7 domain - - - 0.0000000001926 72.0
BYD3_k127_8798149_12 Tetratricopeptide repeat - - - 0.0000000007356 72.0
BYD3_k127_8798149_13 chemotaxis K03408 - - 0.0000004986 62.0
BYD3_k127_8798149_14 PFAM Roadblock LC7 family protein K07131 - - 0.000005221 56.0
BYD3_k127_8798149_2 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 - 2.1.1.199 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000255 304.0
BYD3_k127_8798149_3 Small GTP-binding protein K06883 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001686 280.0
BYD3_k127_8798149_4 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002118 281.0
BYD3_k127_8798149_5 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006899 276.0
BYD3_k127_8798149_6 CheR methyltransferase, all-alpha domain K00575,K13924 - 2.1.1.80,3.1.1.61 0.0000000000000000000000000000000000000000000001776 181.0
BYD3_k127_8798149_7 Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis K03411 - 3.5.1.44 0.00000000000000000000000000000001845 145.0
BYD3_k127_8798149_8 - - - - 0.00000000000000000000000000000002976 138.0
BYD3_k127_8798149_9 Two component signalling adaptor domain K03408 - - 0.0000000000000000000000000000002867 131.0
BYD3_k127_8804337_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000312 422.0
BYD3_k127_8811036_0 Tetratricopeptide repeat - - - 6.597e-196 637.0
BYD3_k127_8811036_1 Putative glutamine amidotransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005912 313.0
BYD3_k127_8811036_2 Domain of unknown function (DUF4159) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006249 301.0
BYD3_k127_8811036_3 Peptidase C14 caspase catalytic subunit p20 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000007514 263.0
BYD3_k127_8811036_4 ATPase family associated with various cellular activities (AAA) K03924 - - 0.0000000000000000000000000000000001306 135.0
BYD3_k127_8842003_0 Heparinase II/III-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003661 459.0
BYD3_k127_8842003_1 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006447 409.0
BYD3_k127_8842003_2 Amidohydrolase K07045 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002 329.0
BYD3_k127_8842003_3 Aminotransferase class-III K01845 - 5.4.3.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001399 280.0
BYD3_k127_8842003_4 PFAM binding-protein-dependent transport systems inner membrane component K02033 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003186 264.0
BYD3_k127_8842003_5 GHMP kinases C terminal K07031 - 2.7.1.168 0.00000000000000000000000000000000000005898 156.0
BYD3_k127_8842003_6 Binding-protein-dependent transport system inner membrane component K02034 - - 0.000000000000000000000000000000000003502 153.0
BYD3_k127_8842003_7 amidohydrolase - - - 0.000000000000000000007484 94.0
BYD3_k127_8842595_0 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 1.03e-238 747.0
BYD3_k127_8842595_1 Fumarase C C-terminus K01744 - 4.3.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003865 606.0
BYD3_k127_8842595_10 Nucleotidyl transferase of unknown function (DUF2204) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001278 283.0
BYD3_k127_8842595_11 KR domain K03793 - 1.5.1.33 0.000000000000000000000000000000000000000000000000000000000000000000001014 254.0
BYD3_k127_8842595_12 - - - - 0.0000000000000000000000000000000000000000000000000000000000005361 220.0
BYD3_k127_8842595_13 DNA polymerase alpha chain like domain K07053 - 3.1.3.97 0.000000000000000000000000000000000000000000000000000000000003926 220.0
BYD3_k127_8842595_14 Ami_3 K01448 - 3.5.1.28 0.0000000000000000000000000000000000000000000000000000000002089 223.0
BYD3_k127_8842595_15 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000002665 201.0
BYD3_k127_8842595_16 Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene K03664 GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0070930,GO:0071704,GO:1901564 - 0.000000000000000000000000000000000000000000000000000007603 193.0
BYD3_k127_8842595_17 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000002043 194.0
BYD3_k127_8842595_18 Short-chain dehydrogenase reductase SDR - - - 0.000000000000000000000000000006486 129.0
BYD3_k127_8842595_19 - - - - 0.00000000000000000000000487 103.0
BYD3_k127_8842595_2 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00161,K11381,K21416 - 1.2.4.1,1.2.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002329 579.0
BYD3_k127_8842595_20 Cupin 2, conserved barrel domain protein - - - 0.0000000000007392 75.0
BYD3_k127_8842595_3 Transketolase, pyrimidine binding domain K00167,K11381,K21417 - 1.2.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001059 569.0
BYD3_k127_8842595_4 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005819 516.0
BYD3_k127_8842595_5 PFAM UBA THIF-type NAD FAD binding K21147 - 2.7.7.80,2.8.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000341 476.0
BYD3_k127_8842595_6 2-oxoacid dehydrogenases acyltransferase (catalytic domain) K00658 - 2.3.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000486 460.0
BYD3_k127_8842595_7 metallophosphoesterase K07096 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008874 331.0
BYD3_k127_8842595_8 Glycosyltransferase Family 4 K14335 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001638 331.0
BYD3_k127_8842595_9 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001355 299.0
BYD3_k127_8863231_0 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K02887,K03628 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006353,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0018130,GO:0019438,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0042802,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097659,GO:1901360,GO:1901362,GO:1901363,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008374 612.0
BYD3_k127_8863231_1 C-methyltransferase C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004295 529.0
BYD3_k127_8863231_10 SdpI/YhfL protein family - GO:0008150,GO:0009636,GO:0042221,GO:0050896 - 0.0000000000000000000000000000000000000000000001627 177.0
BYD3_k127_8863231_11 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 - 2.5.1.3 0.000000000000000000000000000000000001631 148.0
BYD3_k127_8863231_12 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 - - 0.0000000000000000000000000001035 123.0
BYD3_k127_8863231_13 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate K01681 - 4.2.1.3 0.0000000000000000000002054 98.0
BYD3_k127_8863231_14 pathogenesis K02417,K02519 - - 0.000000000000003493 86.0
BYD3_k127_8863231_15 helix_turn_helix, Arsenical Resistance Operon Repressor - GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0044212,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1903506,GO:2000112,GO:2001141 - 0.00000000002385 64.0
BYD3_k127_8863231_2 S-adenosylmethionine-dependent methyltransferase K06969 - 2.1.1.191 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007168 456.0
BYD3_k127_8863231_3 HD domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000465 342.0
BYD3_k127_8863231_4 associated with various cellular activities K03924 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000256 329.0
BYD3_k127_8863231_5 RDD family K06384 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003133 322.0
BYD3_k127_8863231_6 Serine aminopeptidase, S33 K06889 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000127 280.0
BYD3_k127_8863231_7 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001245 250.0
BYD3_k127_8863231_8 protein (some members contain a von Willebrand factor type A (vWA) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000004227 258.0
BYD3_k127_8863231_9 Peptidase family M50 - - - 0.0000000000000000000000000000000000000000000000002024 191.0
BYD3_k127_8899338_0 Bacterial membrane protein, YfhO - - - 9.838e-223 715.0
BYD3_k127_8899338_1 Phenylalanine-4-hydroxylase K00500 GO:0003674,GO:0003824,GO:0004497,GO:0004505,GO:0006082,GO:0006520,GO:0006558,GO:0006559,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009072,GO:0009074,GO:0009987,GO:0016054,GO:0016491,GO:0016705,GO:0016714,GO:0017144,GO:0019439,GO:0019752,GO:0042737,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0046395,GO:0055114,GO:0071704,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606,GO:1902221,GO:1902222 1.14.16.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004112 469.0
BYD3_k127_8899338_10 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.0000000000000000000000000000000000000000000000000000000000000000000000002011 256.0
BYD3_k127_8899338_11 COG4257 Streptogramin lyase - - - 0.0000000000000000000000000000000000000000000000000000000000000005305 236.0
BYD3_k127_8899338_12 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.00000000000000000000000000000000000000000000000000009629 205.0
BYD3_k127_8899338_13 Glycosyl transferase 4-like domain - - - 0.0000000000000000000000000000000000000000000000000146 194.0
BYD3_k127_8899338_14 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.00000000000000000000000000000000000000001132 162.0
BYD3_k127_8899338_15 helix_turn_helix, mercury resistance - - - 0.0000000000000000000000000000000000000004077 152.0
BYD3_k127_8899338_16 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.0000000000000000000000000000000000000009494 161.0
BYD3_k127_8899338_17 Belongs to the acylphosphatase family K01512 - 3.6.1.7 0.0000000000000444 83.0
BYD3_k127_8899338_18 - - - - 0.00008963 47.0
BYD3_k127_8899338_2 Protein of unknown function (DUF512) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000303 454.0
BYD3_k127_8899338_3 Sigma-54 factor, Activator interacting domain (AID) K03092 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008634 437.0
BYD3_k127_8899338_4 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001258 437.0
BYD3_k127_8899338_5 Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002605 367.0
BYD3_k127_8899338_6 Glycosyltransferase like family 2 K00721 - 2.4.1.83 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002431 334.0
BYD3_k127_8899338_7 NAD-dependent glycerol-3-phosphate dehydrogenase domain protein K00057 - 1.1.1.94 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003725 340.0
BYD3_k127_8899338_8 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000467 316.0
BYD3_k127_8899338_9 PFAM SNARE associated Golgi protein K03975 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000378 272.0
BYD3_k127_8921611_0 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 2.178e-292 912.0
BYD3_k127_8921611_1 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro) K01881 - 6.1.1.15 1.512e-214 679.0
BYD3_k127_8921611_10 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001884 383.0
BYD3_k127_8921611_11 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000104 385.0
BYD3_k127_8921611_12 Mur ligase middle domain K11754 - 6.3.2.12,6.3.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000869 324.0
BYD3_k127_8921611_13 AIR carboxylase K06898 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000007576 254.0
BYD3_k127_8921611_14 Mediates influx of magnesium ions K03284 - - 0.0000000000000000000000000000000000000000000000000000000000000000003383 246.0
BYD3_k127_8921611_15 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K02806 - - 0.0000000000000000000000000000000000000000000000001254 182.0
BYD3_k127_8921611_16 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA K01520 - 3.6.1.23 0.000000000000000000000000000000000000000000000001177 189.0
BYD3_k127_8921611_17 Glycosyl transferase, family 2 - - - 0.000000000000000000000000000000000000000000001846 178.0
BYD3_k127_8921611_18 rod shape-determining protein MreC K03570 - - 0.000000000000000000000000000000000000000003139 175.0
BYD3_k127_8921611_19 PAS fold - - - 0.0000000000000000000000000000124 136.0
BYD3_k127_8921611_2 Catalyzes the synthesis of GMP from XMP K01951 GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.5.2 8.895e-204 647.0
BYD3_k127_8921611_20 rod shape-determining protein MreD K03571 - - 0.0000000000000000000000000307 117.0
BYD3_k127_8921611_21 Antibiotic biosynthesis monooxygenase - - - 0.0000000000000000000000001132 110.0
BYD3_k127_8921611_3 Hsp70 protein K03569 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004375 594.0
BYD3_k127_8921611_4 Penicillin-binding Protein dimerisation domain K05515 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002274 544.0
BYD3_k127_8921611_5 Alanine dehydrogenase/PNT, N-terminal domain K00259 - 1.4.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001576 546.0
BYD3_k127_8921611_6 Insulinase (Peptidase family M16) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003217 439.0
BYD3_k127_8921611_7 Cell cycle protein K05837 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003024 451.0
BYD3_k127_8921611_8 Histidyl-tRNA synthetase K01892 - 6.1.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000722 436.0
BYD3_k127_8921611_9 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001065 427.0
BYD3_k127_8933639_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 1.4e-265 829.0
BYD3_k127_8933639_1 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03182 - 4.1.1.98 1.634e-252 786.0
BYD3_k127_8933639_10 HD domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003161 327.0
BYD3_k127_8933639_11 UbiA prenyltransferase family K03179 - 2.5.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001295 325.0
BYD3_k127_8933639_12 Peptidase family M48 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003117 302.0
BYD3_k127_8933639_13 Signal transduction histidine kinase, subgroup 1, dimerisation phosphoacceptor domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002674 305.0
BYD3_k127_8933639_14 ECF sigma factor K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009452 271.0
BYD3_k127_8933639_15 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 - 2.5.1.129 0.000000000000000000000000000000000000000000000000000000000000000000000000003002 259.0
BYD3_k127_8933639_16 GIY-YIG type nucleases (URI domain) K03703 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003522 269.0
BYD3_k127_8933639_17 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 - 3.2.2.23,4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000000007986 258.0
BYD3_k127_8933639_18 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) K03183 - 2.1.1.163,2.1.1.201 0.00000000000000000000000000000000000000000000000000000000000000000000006356 260.0
BYD3_k127_8933639_19 Domain of unknown function (DUF4287) - - - 0.000000000000000000000000000000000000000000000000000000000000000000006175 239.0
BYD3_k127_8933639_2 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process K03385 - 1.7.2.2 2.396e-222 697.0
BYD3_k127_8933639_21 Periplasmic copper-binding protein (NosD) - - - 0.00000000000000000000000000000000000000000000000001205 199.0
BYD3_k127_8933639_22 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 - - 0.0000000000000000000000000000000000000000000000001201 182.0
BYD3_k127_8933639_23 cytochrome c nitrite reductase K15876 - - 0.00000000000000000000000000000000000000000000001607 177.0
BYD3_k127_8933639_24 Calcineurin-like phosphoesterase superfamily domain K07095 - - 0.00000000000000000000000000000000001271 144.0
BYD3_k127_8933639_25 NUDIX domain K08310 - 3.6.1.67 0.0000000000000000000000000000000001613 153.0
BYD3_k127_8933639_26 Maf-like protein K06287 - - 0.0000000000000000000000000000000007966 142.0
BYD3_k127_8933639_27 Polymer-forming cytoskeletal - - - 0.00000000000000000000003568 113.0
BYD3_k127_8933639_28 Maf-like protein K06287 - - 0.00000002555 59.0
BYD3_k127_8933639_29 - - - - 0.00001172 55.0
BYD3_k127_8933639_3 Phosphoglucomutase/phosphomannomutase, C-terminal domain K01840 - 5.4.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001027 505.0
BYD3_k127_8933639_30 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02483,K07659 - - 0.0001122 49.0
BYD3_k127_8933639_4 Cys/Met metabolism PLP-dependent enzyme K01758 - 4.4.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003398 512.0
BYD3_k127_8933639_5 Type II secretion system (T2SS), protein E, N-terminal domain K02454,K02652 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001121 482.0
BYD3_k127_8933639_6 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008247 405.0
BYD3_k127_8933639_7 Alginate export - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001432 390.0
BYD3_k127_8933639_8 Phosphoribosylglycinamide synthetase, C domain K01945 - 6.3.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004891 382.0
BYD3_k127_8933639_9 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003184 350.0
BYD3_k127_960666_0 Multicopper oxidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002338 494.0
BYD3_k127_960666_1 imidazolonepropionase activity - - - 0.00000000000000000000000000000000000000000000000000000003205 201.0
BYD3_k127_960666_2 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000003575 188.0
BYD3_k127_960666_3 Amidohydrolase family - - - 0.00000000000000000001751 92.0
BYD3_k127_976533_0 Dipeptidyl peptidase IV (DPP IV) N-terminal region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006363 509.0
BYD3_k127_976533_1 Acetyltransferase (GNAT) domain K03823 - 2.3.1.183 0.00000000000000000000000000000000000000000000000000000000005171 209.0
BYD3_k127_976533_2 Dipeptidyl peptidase IV (DPP IV) N-terminal region - - - 0.00000000000000000000000000008012 118.0
BYD3_k127_976533_3 - - - - 0.000005165 58.0