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Overview

ID MAG00141
Name BYD3_bin.6
Sample SMP0003
Taxonomy
Kingdom Bacteria
Phylum Acidobacteriota
Class Blastocatellia
Order Pyrinomonadales
Family Pyrinomonadaceae
Genus OLB17
Species
Assembly information
Completeness (%) 64.4
Contamination (%) 1.01
GC content (%) 54.0
N50 (bp) 11,105
Genome size (bp) 2,305,398

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes1911

Gene name Description KEGG GOs EC E-value Score Sequence
BYD3_k127_1063431_0 Type II/IV secretion system protein K02669 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008702 428.0
BYD3_k127_1063431_1 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001297 350.0
BYD3_k127_1063431_2 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 GO:0003674,GO:0003824,GO:0004789,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.3 0.0000000000000000000000000000000000000000009072 166.0
BYD3_k127_1063431_3 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 - 2.5.1.15 0.000000000000000000000000000000000000002228 152.0
BYD3_k127_1063431_4 DNA polymerase III delta subunit K02340 - 2.7.7.7 0.0000000000000000000000000000000001383 145.0
BYD3_k127_1063431_5 Belongs to the TPP enzyme family K01637 - 4.1.3.1 0.000000000000000000000000000005765 134.0
BYD3_k127_1063431_6 Acetyltransferase (GNAT) domain K03789 - 2.3.1.128 0.0000000000000001489 88.0
BYD3_k127_1063431_7 Lipopolysaccharide-assembly - - - 0.00000000000003524 80.0
BYD3_k127_1063431_8 zinc-ribbon domain - - - 0.0005751 51.0
BYD3_k127_1082079_0 Heat shock 70 kDa protein K04043 - - 1.945e-199 631.0
BYD3_k127_1082079_1 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 - 6.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008642 494.0
BYD3_k127_1082079_2 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001535 375.0
BYD3_k127_1082079_3 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.0000000000000000000000000000000000000000000000000000000000000000006779 235.0
BYD3_k127_1082079_4 helix_turn_helix, mercury resistance K13640 - - 0.000000000000000000000000000000000002746 142.0
BYD3_k127_1082079_5 peptidyl-tyrosine sulfation - - - 0.000000000000000000000002975 116.0
BYD3_k127_1082079_6 Tetratricopeptide repeat - - - 0.00000000000000000000003204 114.0
BYD3_k127_1082079_7 - - - - 0.000000000000000000001155 109.0
BYD3_k127_1144429_0 PFAM Cytochrome c assembly protein - - - 0.000000000000000000000000000000000000000000000002978 192.0
BYD3_k127_1144429_1 Pyridoxamine 5'-phosphate oxidase K07005 - - 0.000000000000000000000000000000000325 137.0
BYD3_k127_1144429_2 ResB family K07399 - - 0.0000000000000000000000004265 120.0
BYD3_k127_1144429_3 Pyridine nucleotide-disulphide oxidoreductase K17218 - 1.8.5.4 0.000000000000000000161 102.0
BYD3_k127_1144429_4 Tetratricopeptide repeat - - - 0.00000000000001292 83.0
BYD3_k127_1144429_5 Universal stress protein - - - 0.000000000005037 67.0
BYD3_k127_1144429_6 Cytochrome c3 - - - 0.0002961 52.0
BYD3_k127_115870_0 Galactose-1-phosphate uridyl transferase, C-terminal domain K00965 GO:0003674,GO:0003824,GO:0004335,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006012,GO:0006793,GO:0006796,GO:0008108,GO:0008150,GO:0008152,GO:0008198,GO:0008270,GO:0009056,GO:0009987,GO:0016052,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016779,GO:0019200,GO:0019318,GO:0019320,GO:0019388,GO:0033499,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046365,GO:0046835,GO:0046872,GO:0046914,GO:0070569,GO:0071704,GO:1901575 2.7.7.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003587 484.0
BYD3_k127_115870_1 ATPases associated with a variety of cellular activities - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000402 485.0
BYD3_k127_115870_2 Belongs to the GHMP kinase family. GalK subfamily K00849 - 2.7.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003202 454.0
BYD3_k127_115870_3 ABC-type sugar transport system periplasmic component K10439 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000466 397.0
BYD3_k127_115870_4 inositol monophosphate 1-phosphatase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007118 397.0
BYD3_k127_115870_5 Glycosyl hydrolases family 28 - - - 0.000000000000000000000000000000000003024 143.0
BYD3_k127_1223876_0 PFAM peptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004336 601.0
BYD3_k127_1223876_1 Aminotransferase class-V - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002897 480.0
BYD3_k127_1223876_2 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004227 417.0
BYD3_k127_1223876_3 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005373 273.0
BYD3_k127_1223876_4 extracellular solute-binding protein, family 5 K02035 - - 0.000000000000000000000000000000000000000000000000000001443 211.0
BYD3_k127_1223876_5 COG NOG14600 non supervised orthologous group - - - 0.00000000000000000000000006154 107.0
BYD3_k127_123422_0 Dyp-type peroxidase family - - - 9.505e-210 662.0
BYD3_k127_123422_1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K00383 - 1.8.1.7 6.425e-197 623.0
BYD3_k127_123422_10 Tetratricopeptide repeats K12132 - 2.7.11.1 0.0000000000000008895 83.0
BYD3_k127_123422_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003259 539.0
BYD3_k127_123422_3 methyltransferase K09846 - 2.1.1.210 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001701 477.0
BYD3_k127_123422_4 Peptidase family S58 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004942 432.0
BYD3_k127_123422_5 Beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001532 404.0
BYD3_k127_123422_6 Putative MetA-pathway of phenol degradation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001314 335.0
BYD3_k127_123422_7 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001107 282.0
BYD3_k127_123422_8 HAD-hyrolase-like K01091 - 3.1.3.18 0.00000000000000000000000000000000000000000000000000000000000000000000001627 248.0
BYD3_k127_123422_9 SnoaL-like domain - - - 0.0000000000000000000000000000000000000000000000000000002789 196.0
BYD3_k127_1239836_0 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002008 427.0
BYD3_k127_1239836_1 surface antigen variable number - - - 0.0000000000000000000000000000000000000000000000000000000000000001921 252.0
BYD3_k127_1239836_2 PFAM Nucleotidyl transferase K00963 - 2.7.7.9 0.0000000000000000000000000000000000001971 142.0
BYD3_k127_1239836_3 Protein conserved in bacteria K09800 - - 0.00000001942 69.0
BYD3_k127_1312857_0 Insulinase (Peptidase family M16) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000319 337.0
BYD3_k127_1312857_1 PFAM sugar transferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003147 293.0
BYD3_k127_1312857_2 Peptidase M16 inactive domain K07263 - - 0.00000000000000000000000000000000000000000000000000000000000000000008966 248.0
BYD3_k127_1312857_3 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 - 2.1.1.297 0.0000000000000000000000000000000000000000000000000000000000000003042 229.0
BYD3_k127_1312857_4 Scaffold protein Nfu/NifU N terminal - - - 0.00000000000000000000000000000000000000000000001607 177.0
BYD3_k127_1312857_5 iron ion homeostasis - - - 0.000000000000000000000000000000000000000000005927 185.0
BYD3_k127_1312857_6 Glycosyl transferases group 1 - - - 0.000000000000000000000000002106 124.0
BYD3_k127_1312857_7 NHL repeat - - - 0.00000000000000000000008939 112.0
BYD3_k127_1312857_8 nuclear chromosome segregation - - - 0.000000000000007318 88.0
BYD3_k127_1312857_9 Calcium/calmodulin dependent protein kinase II association domain - - - 0.0001724 51.0
BYD3_k127_1319601_0 3-hydroxyacyl-CoA dehydrogenase K07516 - 1.1.1.35 5.384e-238 756.0
BYD3_k127_1319601_1 Methyladenine glycosylase K01246 - 3.2.2.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001136 269.0
BYD3_k127_1319601_2 DinB superfamily - - - 0.00000000000000000000000000000000000000008492 157.0
BYD3_k127_1319601_4 DinB superfamily - - - 0.000000000000000000000000000005693 128.0
BYD3_k127_1322634_0 Aminotransferase, class V - - - 0.000000000000000000000000000000000000000000000000000000000000000000001188 250.0
BYD3_k127_1322634_1 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000000000000000000001635 202.0
BYD3_k127_1322634_2 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.0000000000000000000000000000000000000000004253 166.0
BYD3_k127_1322634_3 Saccharopine dehydrogenase C-terminal domain - - - 0.0000000001202 65.0
BYD3_k127_1358451_0 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002558 597.0
BYD3_k127_1358451_1 Thiolase, C-terminal domain K00632 - 2.3.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002785 554.0
BYD3_k127_1358451_2 Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg- protoporphyrin IX K03405 - 6.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000005128 234.0
BYD3_k127_1358451_3 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides K08281 - 3.5.1.19 0.00000000000000000000000000000000000000000000001476 176.0
BYD3_k127_1358451_5 23S rRNA-intervening sequence protein - - - 0.000000000000000000000000000000000003149 143.0
BYD3_k127_1358451_6 SMI1 / KNR4 family - - - 0.00000000000000000000000000000000003829 144.0
BYD3_k127_1358451_7 Protein of unknown function (DUF2834) - - - 0.00000000000000000000000769 104.0
BYD3_k127_137581_0 Belongs to the SIS family. GutQ KpsF subfamily K06041 - 5.3.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000072 430.0
BYD3_k127_137581_1 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal K03977 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001385 428.0
BYD3_k127_137581_2 PFAM alpha-2-macroglobulin domain protein K06894 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001634 347.0
BYD3_k127_137581_3 cell redox homeostasis K16089 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001555 286.0
BYD3_k127_137581_4 - - - - 0.00000000000000000000000000000001931 141.0
BYD3_k127_137581_5 - - - - 0.00000000000000000000000000002625 130.0
BYD3_k127_1376315_0 Ribosomal protein S1 K02945 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009862 576.0
BYD3_k127_1376315_1 Type II/IV secretion system protein K02669 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007749 469.0
BYD3_k127_1376315_2 Beta-lactamase K17836 - 3.5.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002353 276.0
BYD3_k127_1376315_3 pyrroloquinoline quinone binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000009036 266.0
BYD3_k127_1376315_4 - - - - 0.0000000000000000000000000000000000000000000537 168.0
BYD3_k127_1376315_5 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K05788 - - 0.0000000000000000000000000000000005465 132.0
BYD3_k127_1404729_0 Flavin-binding monooxygenase-like - - - 3.366e-220 691.0
BYD3_k127_1404729_1 AAA domain, putative AbiEii toxin, Type IV TA system K20459 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000269 379.0
BYD3_k127_1404729_2 Tricorn protease homolog - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003171 329.0
BYD3_k127_1404729_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000006325 216.0
BYD3_k127_1404729_4 - - - - 0.0000000000000000000000000009101 121.0
BYD3_k127_1450621_0 Belongs to the glycosyl hydrolase 2 family K01190 - 3.2.1.23 1.274e-223 721.0
BYD3_k127_1450621_1 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002032 603.0
BYD3_k127_1450621_2 ROK family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009231 416.0
BYD3_k127_1450621_3 Sodium:solute symporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005542 402.0
BYD3_k127_1450621_4 KR domain - - - 0.0000000000000000000000000000000000000000000000000000000000000001556 229.0
BYD3_k127_1450621_5 Periplasmic binding proteins and sugar binding domain of LacI family K10439 - - 0.0000000000000000000000000000000000000000000000000000000007115 214.0
BYD3_k127_1450621_6 COG COG0383 Alpha-mannosidase - - - 0.00000009377 59.0
BYD3_k127_145979_0 - K00262 - 1.4.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002353 413.0
BYD3_k127_145979_1 Catalyzes the oxidation of either pyridoxine 5'- phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP) K00275 - 1.4.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000008503 265.0
BYD3_k127_145979_10 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.0000000000000000000000000000001134 130.0
BYD3_k127_145979_11 Dioxygenase - - - 0.0000000000000000000000000000005667 131.0
BYD3_k127_145979_13 Wd-40 repeat - - - 0.0000000000000000000000003523 111.0
BYD3_k127_145979_14 Transcriptional coactivator pterin dehydratase K01724 - 4.2.1.96 0.000000000000000002451 89.0
BYD3_k127_145979_15 Isocitrate/isopropylmalate dehydrogenase K00031 - 1.1.1.42 0.00000000000002294 73.0
BYD3_k127_145979_16 Belongs to the UPF0109 family K06960 - - 0.0000000000001232 74.0
BYD3_k127_145979_2 Belongs to the RNA methyltransferase TrmD family K00554 GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050518,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.228 0.0000000000000000000000000000000000000000000000000000000000000000000000000003157 263.0
BYD3_k127_145979_3 Belongs to the short-chain dehydrogenases reductases (SDR) family K07124 - - 0.00000000000000000000000000000000000000000000000000000000000000000001763 247.0
BYD3_k127_145979_4 Parallel beta-helix repeats - - - 0.00000000000000000000000000000000000000000000000000000000001458 217.0
BYD3_k127_145979_5 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.0000000000000000000000000000000000000000000000000000000004861 212.0
BYD3_k127_145979_6 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000009218 214.0
BYD3_k127_145979_7 hydrolase activity, acting on ester bonds - - - 0.00000000000000000000000000000000000000000002494 172.0
BYD3_k127_145979_8 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0008150,GO:0015934,GO:0016020,GO:0022625,GO:0022626,GO:0032991,GO:0040007,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071944,GO:1990904 - 0.00000000000000000000000000000000000000000005135 163.0
BYD3_k127_145979_9 Acetyltransferase (GNAT) domain K03790 - 2.3.1.128 0.00000000000000000000000000000000029 138.0
BYD3_k127_1461119_0 Phosphoribosylformylglycinamidine cyclo-ligase K01933 - 6.3.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004133 392.0
BYD3_k127_1461119_1 Belongs to the arylamine N-acetyltransferase family K00675 - 2.3.1.118 0.000000000000000000000000000000000000000000000000000000000005911 216.0
BYD3_k127_1461119_2 Protein of unknown function (DUF445) - - - 0.0000000000000000000000000000000000002087 159.0
BYD3_k127_1461119_3 - - - - 0.0000000000000000001785 97.0
BYD3_k127_1461119_4 - - - - 0.0000000000006846 74.0
BYD3_k127_146746_0 Psort location Cytoplasmic, score K01265 - 3.4.11.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001787 286.0
BYD3_k127_146746_1 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.00000000000000000000000000000000000000000000000000000000000003759 220.0
BYD3_k127_146746_2 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 - - 0.00000000000000000000000000000000000000000000000345 175.0
BYD3_k127_146746_3 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.0000000000000000000000000000005313 122.0
BYD3_k127_146746_4 Belongs to the bacterial ribosomal protein bL36 family K02919 - - 0.000000000000002472 75.0
BYD3_k127_148731_0 Carbon starvation protein K06200 - - 9.334e-198 631.0
BYD3_k127_148731_1 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009309 587.0
BYD3_k127_148731_10 PFAM Acetyltransferase (GNAT) family - - - 0.0000000000000000000000000004672 119.0
BYD3_k127_148731_11 COG1278 Cold shock proteins K03704 - - 0.00000000000000000000000005035 108.0
BYD3_k127_148731_12 BlaR1 peptidase M56 - - - 0.0000000000000000001518 99.0
BYD3_k127_148731_13 cheY-homologous receiver domain - - - 0.000000000000000003328 88.0
BYD3_k127_148731_14 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.000000000000001471 84.0
BYD3_k127_148731_15 - - - - 0.0000000000001079 76.0
BYD3_k127_148731_16 tetratricopeptide repeat - - - 0.000000000002051 77.0
BYD3_k127_148731_17 Domain of unknown function (DUF4870) - - - 0.0006503 50.0
BYD3_k127_148731_2 Glycosyl hydrolase-like 10 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003216 454.0
BYD3_k127_148731_3 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine K00831 GO:0003674,GO:0003824,GO:0004648,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006563,GO:0006564,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.6.1.52 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008642 430.0
BYD3_k127_148731_4 Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis K01042 - 2.9.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001749 388.0
BYD3_k127_148731_5 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001307 323.0
BYD3_k127_148731_6 Involved in the biosynthesis of porphyrin-containing compound - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002301 305.0
BYD3_k127_148731_7 PFAM thioesterase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002271 240.0
BYD3_k127_148731_8 Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety K00453 GO:0003674,GO:0003824,GO:0004833,GO:0005488,GO:0006082,GO:0006520,GO:0006568,GO:0006569,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009072,GO:0009074,GO:0009308,GO:0009310,GO:0009987,GO:0016043,GO:0016054,GO:0016491,GO:0016701,GO:0016702,GO:0019439,GO:0019441,GO:0019752,GO:0020037,GO:0022607,GO:0034641,GO:0042180,GO:0042402,GO:0042430,GO:0042436,GO:0042537,GO:0043436,GO:0043933,GO:0044085,GO:0044106,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0046218,GO:0046395,GO:0046483,GO:0046700,GO:0046906,GO:0048037,GO:0051213,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0070189,GO:0071704,GO:0071840,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 1.13.11.11 0.000000000000000000000000000000000000000000000000000000000000000001595 236.0
BYD3_k127_148731_9 Belongs to the UPF0502 family K09915 - - 0.00000000000000000000000000000000000000000000000000000000001308 213.0
BYD3_k127_155794_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 8.163e-301 951.0
BYD3_k127_155794_1 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.0000000000000000000000000000000000001256 150.0
BYD3_k127_155794_2 Putative lumazine-binding - - - 0.00000000000000000000000000000000001078 141.0
BYD3_k127_155794_3 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation K06891 - - 0.0000000000000000000000004881 108.0
BYD3_k127_155794_4 - - - - 0.000000000000000000000003244 107.0
BYD3_k127_155794_5 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.000000000000000000009566 95.0
BYD3_k127_155794_6 - - - - 0.0000000000000000002608 91.0
BYD3_k127_155794_7 tetratricopeptide repeat - - - 0.000000001081 72.0
BYD3_k127_1581572_0 Transcriptional regulatory protein, C terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001007 283.0
BYD3_k127_1581572_1 Beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000000000001333 242.0
BYD3_k127_1581572_2 Hep Hag repeat protein - - - 0.0000000000007269 78.0
BYD3_k127_1618912_0 aldehyde oxidase and xanthine dehydrogenase a b hammerhead K13482 - 1.17.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002772 480.0
BYD3_k127_1618912_1 XdhC Rossmann domain K07402 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007328 297.0
BYD3_k127_1618912_2 ATP dependent DNA ligase C terminal region - - - 0.00000000000000000000000000000000000000000000000000000000000000000001588 248.0
BYD3_k127_1618912_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000006722 223.0
BYD3_k127_1618912_4 - - - - 0.00000000000000000000000000009044 123.0
BYD3_k127_1674433_0 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001081 297.0
BYD3_k127_1674433_1 PFAM Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000002734 214.0
BYD3_k127_1674433_2 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008614,GO:0008615,GO:0009058,GO:0009110,GO:0009987,GO:0016740,GO:0016769,GO:0017144,GO:0018130,GO:0019438,GO:0033856,GO:0034641,GO:0042364,GO:0042816,GO:0042819,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072524,GO:0072525,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 2.6.99.2 0.00002496 49.0
BYD3_k127_1761264_0 PFAM Copper amine oxidase, N2 domain K00276 - 1.4.3.21 1.336e-203 652.0
BYD3_k127_1761264_1 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004495 519.0
BYD3_k127_1761264_10 Antibiotic biosynthesis monooxygenase - - - 0.0000000000000000000000000000000000000209 145.0
BYD3_k127_1761264_11 Peptidase family M23 - - - 0.000000000000000000000000000000000001017 145.0
BYD3_k127_1761264_12 cAMP biosynthetic process - - - 0.000000000001275 68.0
BYD3_k127_1761264_13 Transposase IS200 like - - - 0.0000000000533 70.0
BYD3_k127_1761264_2 PFAM Semialdehyde dehydrogenase NAD - binding K00133 - 1.2.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001095 370.0
BYD3_k127_1761264_3 Belongs to the transferase hexapeptide repeat family K00674 - 2.3.1.117 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002153 345.0
BYD3_k127_1761264_4 Calcineurin-like phosphoesterase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002527 313.0
BYD3_k127_1761264_5 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004602 287.0
BYD3_k127_1761264_6 Diacylglycerol kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001138 278.0
BYD3_k127_1761264_7 Pfam:UPF0118 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003552 274.0
BYD3_k127_1761264_8 PFAM aminotransferase, class I and II K00812 - 2.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000005569 254.0
BYD3_k127_1761264_9 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 - 1.17.1.8 0.00000000000000000000000000000000000000000000000000000088 199.0
BYD3_k127_1761981_0 PFAM Peptidase M16 inactive domain K07263 - - 2.826e-257 822.0
BYD3_k127_1761981_1 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 5.114e-213 679.0
BYD3_k127_1761981_10 Anti-sigma-K factor rskA - - - 0.00000000000000000000000000000000000000001995 163.0
BYD3_k127_1761981_11 DSBA oxidoreductase - - - 0.000000000000000000000000000000001974 139.0
BYD3_k127_1761981_12 Vitamin k epoxide reductase - - - 0.0000000000003546 75.0
BYD3_k127_1761981_13 - - - - 0.000006375 54.0
BYD3_k127_1761981_14 P pilus assembly Cpx signaling pathway, periplasmic inhibitor zinc-resistance associated protein K06006 - - 0.0004732 49.0
BYD3_k127_1761981_2 DeoC/LacD family aldolase K11645 - 4.1.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005102 554.0
BYD3_k127_1761981_3 Alanine dehydrogenase/PNT, C-terminal domain K00001 - 1.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000632 463.0
BYD3_k127_1761981_4 hydrolase activity, acting on ester bonds - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004765 359.0
BYD3_k127_1761981_5 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006416 291.0
BYD3_k127_1761981_6 Eukaryotic DNA topoisomerase I, catalytic core K03168 - 5.99.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000002118 273.0
BYD3_k127_1761981_7 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000001486 196.0
BYD3_k127_1761981_8 Sigma-70, region 4 K03088 - - 0.00000000000000000000000000000000000000000000000002511 184.0
BYD3_k127_1761981_9 PFAM GCN5-related N-acetyltransferase - - - 0.00000000000000000000000000000000000000000000000003648 182.0
BYD3_k127_1797556_0 repeat protein - - - 5.415e-267 835.0
BYD3_k127_1797556_1 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 1.659e-215 696.0
BYD3_k127_1797556_10 Polysaccharide biosynthesis/export protein - - - 0.000000000000006712 86.0
BYD3_k127_1797556_11 MutS domain I K03555 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.00000000000667 66.0
BYD3_k127_1797556_13 - - - - 0.00003453 46.0
BYD3_k127_1797556_2 GDP-mannose 4,6-dehydratase activity K01711 - 4.2.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006416 460.0
BYD3_k127_1797556_3 ADP-glyceromanno-heptose 6-epimerase activity K02377,K16554 - 1.1.1.271 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004337 425.0
BYD3_k127_1797556_4 CobQ CobB MinD ParA nucleotide binding domain K08252,K13661,K16554,K16692 - 2.7.10.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004835 326.0
BYD3_k127_1797556_5 extracellular solute-binding protein, family 5 K02035 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001536 280.0
BYD3_k127_1797556_6 Glycosyl hydrolase family 3 N terminal domain K01207 - 3.2.1.52 0.000000000000000000000000000000000000000000000000000000000009406 220.0
BYD3_k127_1797556_7 oxidoreductase activity - - - 0.000000000000000000000000000000000000000000000000000000001366 229.0
BYD3_k127_1797556_8 Lamin Tail Domain K07004 - - 0.0000000000000000000000000000000000000000002121 183.0
BYD3_k127_1797556_9 PFAM Proprotein convertase P-domain - - - 0.000000000000000000004232 110.0
BYD3_k127_1802309_0 WD40-like Beta Propeller Repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002008 424.0
BYD3_k127_1802309_1 aminopeptidase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011 422.0
BYD3_k127_1802309_2 TonB dependent receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001801 271.0
BYD3_k127_1802309_3 Zn-dependent hydrolase, glyoxylase - - - 0.0000000000000000000000000000000000000000000000000003511 197.0
BYD3_k127_1802309_4 FAD binding domain - - - 0.0000000000000000000000000000000000009796 154.0
BYD3_k127_1802309_5 - - - - 0.000000000000000000000000000000000007111 148.0
BYD3_k127_1802309_6 Membrane - - - 0.00000000000000000000000003022 113.0
BYD3_k127_1975384_0 Belongs to the GSP D family K02453 - - 0.00000000000000000000000000000000000000000001599 186.0
BYD3_k127_1975384_1 Prokaryotic N-terminal methylation motif K02456 - - 0.00000000000000000002506 98.0
BYD3_k127_1975384_2 Prokaryotic N-terminal methylation motif K02456 - - 0.00000000000000000005165 96.0
BYD3_k127_1976422_0 PFAM asparagine synthase K01953 - 6.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003083 577.0
BYD3_k127_1976422_1 PFAM RNA-binding protein AU-1 Ribonuclease E G K08301 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001013 511.0
BYD3_k127_1976422_10 Glycosyl transferase, family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000008024 245.0
BYD3_k127_1976422_11 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 - 5.1.3.13 0.000000000000000000000000000000000000000000000000000000000000004723 222.0
BYD3_k127_1976422_12 maltose O-acetyltransferase activity - - - 0.000000000000000000000000000000000000000000000000000000004615 207.0
BYD3_k127_1976422_13 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000001502 207.0
BYD3_k127_1976422_14 Glycosyltransferase like family 2 - - - 0.000000000000000000000000000000000000000007588 165.0
BYD3_k127_1976422_15 23S rRNA-intervening sequence protein - - - 0.0000000000000000000000000000000000007283 143.0
BYD3_k127_1976422_16 O-Antigen ligase K02847 - - 0.000000000000000000000000000000000006317 153.0
BYD3_k127_1976422_17 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.0000000000000000000000000000000001848 149.0
BYD3_k127_1976422_18 3-demethylubiquinone-9 3-O-methyltransferase activity K18827 - 2.1.1.294,2.7.1.181 0.000000000000000000000001776 115.0
BYD3_k127_1976422_19 Involved in the tonB-independent uptake of proteins K12132 - 2.7.11.1 0.00000000000000000000003181 104.0
BYD3_k127_1976422_2 DNA polymerase K02335 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003413 448.0
BYD3_k127_1976422_20 C4-type zinc ribbon domain K07164 - - 0.00000000000000000000007418 107.0
BYD3_k127_1976422_21 peptidyl-tyrosine sulfation - - - 0.000000000002652 79.0
BYD3_k127_1976422_22 Tetratricopeptide repeat - - - 0.000000006545 70.0
BYD3_k127_1976422_3 LPS biosynthesis protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001671 405.0
BYD3_k127_1976422_4 PFAM Glycosyl transferase family 4 K02851 - 2.7.8.33,2.7.8.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000128 417.0
BYD3_k127_1976422_5 Nucleotidyl transferase K00973 - 2.7.7.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003694 392.0
BYD3_k127_1976422_6 methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001276 380.0
BYD3_k127_1976422_7 NmrA-like family K17947 - 5.1.3.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001953 375.0
BYD3_k127_1976422_8 Glycosyl transferase 4-like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002245 283.0
BYD3_k127_1976422_9 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004469 261.0
BYD3_k127_199471_0 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K13015 - 1.1.1.136 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001601 523.0
BYD3_k127_199471_1 Redoxin K03564 - 1.11.1.15 0.000000000000000000000000000000001958 131.0
BYD3_k127_199471_2 - - - - 0.00000000000000000000001654 114.0
BYD3_k127_199471_3 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03564 - 1.11.1.15 0.0000000000000005903 78.0
BYD3_k127_199471_4 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS - - - 0.00000000005586 67.0
BYD3_k127_199471_6 PFAM Rhodanese-like K01011 - 2.8.1.1,2.8.1.2 0.0003525 44.0
BYD3_k127_1996703_0 Sodium pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for Na( ) movement across the membrane K15987 - 3.6.1.1 0.0 1164.0
BYD3_k127_1996703_1 Domain of unknown function DUF87 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001909 603.0
BYD3_k127_1996703_2 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.0000000000000000000000000000000000000000000000000000000000000000181 229.0
BYD3_k127_1996703_3 PFAM Uncharacterised protein family UPF0047 - - - 0.00000000000000000000000000000000000000000008858 163.0
BYD3_k127_1996703_4 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.0000000000000000000000000000000000000000002487 162.0
BYD3_k127_1996703_5 3-demethylubiquinone-9 3-methyltransferase K04750 - - 0.000000000000000000000000000000000001129 143.0
BYD3_k127_1996703_6 Protein of unknown function (DUF3142) - - - 0.0000000002129 74.0
BYD3_k127_1996703_7 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K05807 - - 0.00008473 56.0
BYD3_k127_202196_0 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro) K01881 GO:0003674,GO:0003824,GO:0004812,GO:0004827,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006433,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017101,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.15 9.513e-258 803.0
BYD3_k127_202196_1 Belongs to the thiolase family K00626 - 2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001354 459.0
BYD3_k127_202196_2 Proline dehydrogenase K00318 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001005 436.0
BYD3_k127_202196_3 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001336 358.0
BYD3_k127_202196_4 MafB19-like deaminase K01485 - 3.5.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000005509 257.0
BYD3_k127_202196_5 pfam nudix - - - 0.0000000000000000000000000000000000000000000000004353 179.0
BYD3_k127_202196_6 COG0457 FOG TPR repeat - - - 0.0000000000000000000000000001875 130.0
BYD3_k127_202196_7 - - - - 0.000000000000000000001582 102.0
BYD3_k127_202196_8 peptidyl-tyrosine sulfation - - - 0.000000000001142 75.0
BYD3_k127_2046358_0 elongation factor SelB, winged helix K03833 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001649 497.0
BYD3_k127_2046358_1 Two component, sigma54 specific, transcriptional regulator, Fis family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008487 331.0
BYD3_k127_2046358_2 Uncharacterized conserved protein (COG2071) K09166 - - 0.000000000000000000000000000000000000000000000000000000000000000005437 231.0
BYD3_k127_2046358_3 Protein of unknown function (DUF2442) - - - 0.0000000000000000000006636 96.0
BYD3_k127_2130370_0 PFAM X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K06978 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007201 332.0
BYD3_k127_2130370_1 esterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003916 294.0
BYD3_k127_2130370_2 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 - 2.3.1.181 0.0000000000000000000000000000000000000000000000000000007549 200.0
BYD3_k127_2130370_3 dehydrogenase complex catalyzes the overall conversion of - - - 0.00000000000000000000000000000000000000000001569 174.0
BYD3_k127_2132432_0 Predicted nucleotidyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002867 292.0
BYD3_k127_2132432_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000002843 227.0
BYD3_k127_2132432_2 Disulphide isomerase - - - 0.0000000000000000000000000000000000000000008407 160.0
BYD3_k127_2132432_3 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000224 107.0
BYD3_k127_2132432_4 Transcriptional regulatory protein, C terminal - - - 0.000000000000000000000532 101.0
BYD3_k127_2181505_0 SMART Elongator protein 3 MiaB NifB - - - 1.362e-224 706.0
BYD3_k127_2181505_1 UDP-glucoronosyl and UDP-glucosyl transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001609 391.0
BYD3_k127_2181505_2 pyruvate phosphate dikinase PEP - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002079 383.0
BYD3_k127_2181505_3 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001401 280.0
BYD3_k127_2181505_4 Domain present in PSD-95, Dlg, and ZO-1/2. K08070,K08372 - 1.3.1.74 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003372 284.0
BYD3_k127_2181505_5 Inositol monophosphatase family K01082 - 3.1.3.7 0.00000000000000000000000000000000000000000000000000000000001784 216.0
BYD3_k127_2181505_6 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K02945,K03527 - 1.17.7.4 0.0000000000000000000000000000000000000000000000000001021 194.0
BYD3_k127_2181505_7 Domain of unknown function (DUF4349) - - - 0.00000000000000000000002128 113.0
BYD3_k127_2181505_8 Periplasmic or secreted lipoprotein - - - 0.0000000000002168 79.0
BYD3_k127_2230637_0 radical SAM domain protein K04070 - 1.97.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004323 378.0
BYD3_k127_2230637_1 Putative esterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001032 347.0
BYD3_k127_2230637_2 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.0000000000000000000000000000000000004285 146.0
BYD3_k127_2230637_3 - - - - 0.000000000000000000000000000000000004397 141.0
BYD3_k127_2230637_4 Protein of unknown function (DUF2721) - - - 0.0000000000000000000008431 102.0
BYD3_k127_2232807_0 Belongs to the Glu Leu Phe Val dehydrogenases family K00261 - 1.4.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004619 593.0
BYD3_k127_2232807_1 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00282 - 1.4.4.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008747 437.0
BYD3_k127_2232807_2 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001971 384.0
BYD3_k127_2232807_3 TIGRFAM TIGR00268 family protein K06864 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001909 271.0
BYD3_k127_2232807_4 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.00000000000000000000000000000000000000000001457 165.0
BYD3_k127_2232807_5 PFAM Protein kinase domain - - - 0.00000005851 65.0
BYD3_k127_2291974_0 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000005991 227.0
BYD3_k127_2291974_1 AMP-dependent synthetase and ligase K01895 - 6.2.1.1 0.00000000000000000000000000000000312 138.0
BYD3_k127_2291974_2 Belongs to the aspartokinase family K00928 - 2.7.2.4 0.00000000000000000004956 97.0
BYD3_k127_2291974_3 - - - - 0.000000000000002616 78.0
BYD3_k127_2314475_0 Aerobic-type carbon monoxide dehydrogenase large subunit CoxL CutL homologs K11177 - 1.17.1.4 1.768e-287 899.0
BYD3_k127_2314475_1 FecR protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002127 492.0
BYD3_k127_2314475_2 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001191 421.0
BYD3_k127_2314475_3 PFAM FAD binding domain in molybdopterin dehydrogenase K11178 - 1.17.1.4 0.0000000000000000000000000000000000000000000000000000000003143 203.0
BYD3_k127_2314475_4 Sigma-70 region 2 K03088 - - 0.000000000000000000000000000004756 127.0
BYD3_k127_2328810_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000222 529.0
BYD3_k127_2328810_1 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004892 376.0
BYD3_k127_2328810_10 Electron transfer flavoprotein FAD-binding domain K03522 - - 0.0000000000000000000149 95.0
BYD3_k127_2328810_11 Belongs to the bacterial ribosomal protein bL32 family K02911 - - 0.000000000002142 68.0
BYD3_k127_2328810_2 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain K00609 GO:0003674,GO:0003824,GO:0004070,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016741,GO:0016743,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002355 371.0
BYD3_k127_2328810_3 Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor K00254 - 1.3.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002659 364.0
BYD3_k127_2328810_4 TIGRFAM malonyl CoA-acyl carrier protein transacylase K00645 - 2.3.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004298 356.0
BYD3_k127_2328810_5 Electron transfer flavoprotein domain K03521 - - 0.0000000000000000000000000000000000000000000000000000000000000000000005384 247.0
BYD3_k127_2328810_6 Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant K02825 - 2.4.2.9 0.000000000000000000000000000000000000000000000000000000000000004076 223.0
BYD3_k127_2328810_7 Belongs to the glycosyl hydrolase 32 family K00692 - 2.4.1.10 0.0000000000000000000000000000000000000000000000000000000006873 220.0
BYD3_k127_2328810_8 Uncharacterized ACR, COG1399 K07040 - - 0.0000000000000000000000004721 111.0
BYD3_k127_2328810_9 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.000000000000000000000003176 103.0
BYD3_k127_2345979_0 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000091 267.0
BYD3_k127_2345979_1 Histidine kinase K07636 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000001536 243.0
BYD3_k127_2345979_10 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) K09457 - 1.7.1.13 0.000000000000000000000000000000001345 134.0
BYD3_k127_2345979_11 ASCH - - - 0.00000000000000000000000000000009427 129.0
BYD3_k127_2345979_12 Protein of unknown function (DUF952) - - - 0.0000000000000000000000002981 108.0
BYD3_k127_2345979_13 CarD-like/TRCF domain K07736 - - 0.000000000000000000000003277 108.0
BYD3_k127_2345979_2 orotate phosphoribosyltransferase activity K00762 - 2.4.2.10 0.0000000000000000000000000000000000000000000000000000000000000005772 224.0
BYD3_k127_2345979_3 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 - 5.4.99.12 0.000000000000000000000000000000000000000000000000000000000009671 217.0
BYD3_k127_2345979_4 phosphate regulon transcriptional regulatory protein PhoB K07657 - - 0.00000000000000000000000000000000000000000000000000000001686 205.0
BYD3_k127_2345979_5 PD-(D/E)XK nuclease superfamily - - - 0.000000000000000000000000000000000000000000005386 168.0
BYD3_k127_2345979_6 Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02342,K03763 - 2.7.7.7 0.000000000000000000000000000000000000000000005825 174.0
BYD3_k127_2345979_7 COG1629 Outer membrane receptor proteins, mostly Fe transport K02014 - - 0.0000000000000000000000000000000000000000005168 174.0
BYD3_k127_2345979_8 Cytidylyltransferase family K00981 - 2.7.7.41 0.00000000000000000000000000000000000002072 154.0
BYD3_k127_2345979_9 phosphohistidine phosphatase, SixA K08296 - - 0.00000000000000000000000000000000001841 141.0
BYD3_k127_238272_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 - 6.1.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001246 351.0
BYD3_k127_238272_1 PD-(D/E)XK nuclease superfamily - - - 0.0000000000000000000000000000000000000001656 153.0
BYD3_k127_238272_2 Cysteine dioxygenase type I K00456 - 1.13.11.20 0.0000000000000000000000000000000000000002181 156.0
BYD3_k127_238272_3 Cytochrome C biogenesis protein transmembrane region - - - 0.0000000000000000000000000000000000000002478 153.0
BYD3_k127_238272_4 - - - - 0.0000000000003347 82.0
BYD3_k127_238977_0 Required for chromosome condensation and partitioning K03529 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003226 402.0
BYD3_k127_238977_1 Bacterial capsule synthesis protein PGA_cap - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002071 307.0
BYD3_k127_238977_2 Belongs to the glycosyl hydrolase 32 family K00692 - 2.4.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000005488 263.0
BYD3_k127_238977_3 bacterial-type flagellum-dependent cell motility - - - 0.0000000000000000000000000000000000000000000000000000000000001123 237.0
BYD3_k127_238977_4 Glyoxalase-like domain K06996 - - 0.0000000000000000000000000000000000000000000002 170.0
BYD3_k127_238977_5 Domain of unknown function (DUF4388) K04562 - - 0.0003573 48.0
BYD3_k127_239615_0 Belongs to the glycosyl hydrolase 57 family K16149 - 2.4.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007609 587.0
BYD3_k127_239615_2 Domain of unknown function (DUF4912) K09942 - - 0.000004726 58.0
BYD3_k127_2405371_0 PFAM O-methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005559 320.0
BYD3_k127_2405371_1 acetyltransferases and hydrolases with the alpha beta hydrolase fold - - - 0.000000000000000000000000000000000000000000000000000000000000001571 244.0
BYD3_k127_2405371_2 Tetratricopeptide repeat - - - 0.000000000000000000000000000000004201 149.0
BYD3_k127_2467178_0 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 - 4.3.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006886 548.0
BYD3_k127_2467178_1 prohibitin homologues - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002817 297.0
BYD3_k127_2467178_2 Belongs to the glutathione peroxidase family K00432 - 1.11.1.9 0.0000000000000000000000000000000000000000000000000000000000001347 218.0
BYD3_k127_2467178_3 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.0000000000000000000000000000000000000000000000002771 183.0
BYD3_k127_2467178_4 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.00000000000000000000000009633 115.0
BYD3_k127_2467178_5 Domain of unknown function (DUF5122) beta-propeller - - - 0.000007195 53.0
BYD3_k127_2473574_0 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000127 454.0
BYD3_k127_2473574_1 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000008535 295.0
BYD3_k127_2473574_2 - - - - 0.00000000000001031 82.0
BYD3_k127_254047_0 PFAM Methylmalonyl-CoA mutase K01848 - 5.4.99.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004297 293.0
BYD3_k127_254047_1 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 - 2.1.1.190 0.0000000000000000000000000000000000000000000000000000000000000000003386 246.0
BYD3_k127_254047_2 outer membrane autotransporter barrel domain protein - - - 0.00000000000000000000000003473 117.0
BYD3_k127_254047_3 PFAM Peptidase family M48 - - - 0.0000001141 58.0
BYD3_k127_25622_0 4Fe-4S dicluster domain K00184 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007185 550.0
BYD3_k127_25622_1 GHMP kinases C terminal K07031 - 2.7.1.168 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002847 278.0
BYD3_k127_25622_2 Cytochrome c7 and related cytochrome c K19405,K19411 GO:0003674,GO:0005488,GO:0005507,GO:0006950,GO:0008150,GO:0008270,GO:0010035,GO:0010038,GO:0042221,GO:0043167,GO:0043169,GO:0046686,GO:0046688,GO:0046870,GO:0046872,GO:0046914,GO:0050896,GO:0050897,GO:0097501,GO:1990169,GO:1990170 2.7.14.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004584 272.0
BYD3_k127_25622_3 - - - - 0.00000000000000000000000000000000000000000004463 169.0
BYD3_k127_25622_4 transcriptional regulator sugar kinase K00845 - 2.7.1.2 0.00000000000000000000000000000000003091 146.0
BYD3_k127_25622_5 Transposase IS200 like - - - 0.000000000000000000000000000005124 125.0
BYD3_k127_25622_6 Pfam SNARE associated Golgi protein - - - 0.00000006898 63.0
BYD3_k127_2581818_0 General secretory system II protein E domain protein K02454 - - 0.000000000000000000000000000000000000000000000001538 195.0
BYD3_k127_2581818_1 Type II secretion system (T2SS), protein F K02653 - - 0.0000000000000000000000004078 120.0
BYD3_k127_2581818_2 COG4796 Type II secretory pathway, component HofQ K02507,K02666 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006139,GO:0006259,GO:0006308,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0015976,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901575 - 0.00000000000000003055 90.0
BYD3_k127_2591594_0 TIGRFAM glutamine synthetase, type I K01915 GO:0001968,GO:0003674,GO:0003824,GO:0004356,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006520,GO:0006541,GO:0006542,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009405,GO:0009605,GO:0009607,GO:0009893,GO:0009987,GO:0010468,GO:0010604,GO:0010628,GO:0010755,GO:0010756,GO:0010954,GO:0016020,GO:0016053,GO:0016211,GO:0016874,GO:0016879,GO:0016880,GO:0019222,GO:0019752,GO:0019899,GO:0020012,GO:0030162,GO:0030312,GO:0030682,GO:0031323,GO:0031325,GO:0032268,GO:0032270,GO:0035375,GO:0040007,GO:0043207,GO:0043436,GO:0044044,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044403,GO:0044413,GO:0044415,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0045862,GO:0046394,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0051701,GO:0051704,GO:0051707,GO:0051805,GO:0051807,GO:0051832,GO:0051834,GO:0052173,GO:0052200,GO:0052564,GO:0052572,GO:0060255,GO:0065007,GO:0070613,GO:0071704,GO:0071944,GO:0075136,GO:0080090,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1903317,GO:1903319 6.3.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002537 604.0
BYD3_k127_2591594_1 arginine decarboxylase activity K01585 GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006525,GO:0006527,GO:0006576,GO:0006595,GO:0006596,GO:0006807,GO:0008150,GO:0008152,GO:0008792,GO:0009056,GO:0009058,GO:0009063,GO:0009064,GO:0009065,GO:0009308,GO:0009309,GO:0009445,GO:0009446,GO:0009987,GO:0016054,GO:0016829,GO:0016830,GO:0016831,GO:0019752,GO:0034641,GO:0042401,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044271,GO:0044281,GO:0044282,GO:0046395,GO:0071704,GO:0097164,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606 4.1.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001742 559.0
BYD3_k127_2591594_10 Deoxyhypusine synthase K00809 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0008612,GO:0009058,GO:0009987,GO:0010467,GO:0016740,GO:0016765,GO:0018193,GO:0018205,GO:0019538,GO:0034038,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0051604,GO:0071704,GO:1901564 2.5.1.46 0.0000000000000000000000000000000000000000000000000000000000008031 224.0
BYD3_k127_2591594_11 tRNA 3'-trailer cleavage K00784,K01120 - 3.1.26.11,3.1.4.17 0.00000000000000000000000000000000000000000000000000003816 196.0
BYD3_k127_2591594_12 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000007626 201.0
BYD3_k127_2591594_13 PFAM peptidase S1 and S6, chymotrypsin Hap K04771 - 3.4.21.107 0.00000000000000000000000000000000000000000000001935 177.0
BYD3_k127_2591594_14 TIGRFAM molybdenum cofactor synthesis - - - 0.00000000000000000000000000000000000000001383 158.0
BYD3_k127_2591594_16 RNA recognition motif - - - 0.00000000000000000000000000001617 121.0
BYD3_k127_2591594_17 Protein of unknown function (DUF3574) - - - 0.000000000000000000000001419 109.0
BYD3_k127_2591594_18 cheY-homologous receiver domain K11443 - - 0.0000000000000000000000528 102.0
BYD3_k127_2591594_19 Fe2 transport system protein A K04758 - - 0.00000000000000001635 85.0
BYD3_k127_2591594_2 PFAM Peptidase S10, serine carboxypeptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006545 551.0
BYD3_k127_2591594_20 Polysaccharide biosynthesis/export protein - - - 0.0000000000044 77.0
BYD3_k127_2591594_21 Zinc-dependent metalloprotease - - - 0.00000007942 64.0
BYD3_k127_2591594_22 - - - - 0.000002063 53.0
BYD3_k127_2591594_23 Type IV minor pilin ComP, DNA uptake sequence receptor - - - 0.00009713 50.0
BYD3_k127_2591594_3 transporter of a GTP-driven Fe(2 ) uptake system K04759 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001197 548.0
BYD3_k127_2591594_4 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003903 509.0
BYD3_k127_2591594_5 amidohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001148 435.0
BYD3_k127_2591594_6 Enoyl-(Acyl carrier protein) reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003447 277.0
BYD3_k127_2591594_7 PFAM EamA-like transporter family K15270 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002698 265.0
BYD3_k127_2591594_8 Arginase family K01480 - 3.5.3.11 0.000000000000000000000000000000000000000000000000000000000000000000000007954 254.0
BYD3_k127_2591594_9 Orotidine 5'-phosphate decarboxylase / HUMPS family K01591 GO:0003674,GO:0003824,GO:0004590,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006206,GO:0006207,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019856,GO:0034641,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046112,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000002503 245.0
BYD3_k127_2610168_0 Sigma-54 interaction domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000143 399.0
BYD3_k127_2610168_1 PFAM Na-Ca exchanger integrin-beta4 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004185 380.0
BYD3_k127_2610168_10 Belongs to the UPF0235 family K09131 - - 0.000000000000000000009366 96.0
BYD3_k127_2610168_11 WD40-like Beta Propeller Repeat K03641 - - 0.0000000000000000002026 98.0
BYD3_k127_2610168_12 Specifically methylates the N7 position of guanine in position 527 of 16S rRNA K03501 - 2.1.1.170 0.000000000000000001324 94.0
BYD3_k127_2610168_13 Staphylococcal nuclease homologues - - - 0.0000000004064 71.0
BYD3_k127_2610168_14 integral membrane protein K02221 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000003462 56.0
BYD3_k127_2610168_15 Tricorn protease homolog - - - 0.00008374 51.0
BYD3_k127_2610168_16 peptidyl-prolyl cis-trans isomerase activity K03769,K07533 - 5.2.1.8 0.0007022 50.0
BYD3_k127_2610168_2 transcriptional regulatory protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008334 319.0
BYD3_k127_2610168_3 PAS domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002243 307.0
BYD3_k127_2610168_4 Protein of unknown function (DUF418) K07148 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006662 263.0
BYD3_k127_2610168_5 Putative esterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001055 258.0
BYD3_k127_2610168_6 Protein of unknown function (DUF1624) - - - 0.0000000000000000000000000000000000000000000000000000000000008749 221.0
BYD3_k127_2610168_7 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.00000000000000000000000000000000000000000000000000000006409 203.0
BYD3_k127_2610168_8 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000000000000000000000004251 140.0
BYD3_k127_2610168_9 WD40-like Beta Propeller Repeat K03641 - - 0.00000000000000000000000000001872 123.0
BYD3_k127_2694476_0 Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11785 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006152 353.0
BYD3_k127_2694476_1 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006118 267.0
BYD3_k127_2694476_2 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 - 2.5.1.129 0.0000000000000000000000000000000000000000000000004863 183.0
BYD3_k127_2694476_3 - - - - 0.000000000000000000000000000000000000000000004433 176.0
BYD3_k127_2694476_4 Phosphate acyltransferases K00655 - 2.3.1.51 0.00000000000000000000000000000000001546 148.0
BYD3_k127_2694476_5 Zinc carboxypeptidase - - - 0.00004089 51.0
BYD3_k127_2709451_0 alpha-L-rhamnosidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004039 610.0
BYD3_k127_2709451_1 Glycosyl Hydrolase Family 88 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001781 410.0
BYD3_k127_2709451_2 Methane oxygenase PmoA - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000028 266.0
BYD3_k127_2709451_3 Involved in the anomeric conversion of L-rhamnose K03534 GO:0003674,GO:0003824,GO:0005975,GO:0005996,GO:0008150,GO:0008152,GO:0009056,GO:0016052,GO:0016853,GO:0016854,GO:0016857,GO:0019299,GO:0019301,GO:0019318,GO:0019320,GO:0044238,GO:0044281,GO:0044282,GO:0046365,GO:0071704,GO:1901575 5.1.3.32 0.00000000000000000000000006265 108.0
BYD3_k127_2709451_4 Involved in the anomeric conversion of L-rhamnose K03534 GO:0003674,GO:0003824,GO:0005975,GO:0005996,GO:0008150,GO:0008152,GO:0009056,GO:0016052,GO:0016853,GO:0016854,GO:0016857,GO:0019299,GO:0019301,GO:0019318,GO:0019320,GO:0044238,GO:0044281,GO:0044282,GO:0046365,GO:0071704,GO:1901575 5.1.3.32 0.0000000000006381 68.0
BYD3_k127_2712632_0 UDP-N-acetylglucosamine 2-epimerase K01791 - 5.1.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005364 434.0
BYD3_k127_2712632_1 Polysaccharide biosynthesis protein K17716 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006242 419.0
BYD3_k127_2712632_10 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose - - - 0.000000000000000000000000000000000000000000001211 178.0
BYD3_k127_2712632_11 family 9 - - - 0.000000000000000000000000000000000000000000001926 179.0
BYD3_k127_2712632_12 Glycosyl transferase, family 2 - - - 0.0000000000000000000000000000000000000000000377 171.0
BYD3_k127_2712632_13 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.0000000000000000000000000000000000001204 146.0
BYD3_k127_2712632_14 3-demethylubiquinone-9 3-O-methyltransferase activity - - - 0.00000000000000000000000000000004067 134.0
BYD3_k127_2712632_15 PFAM Methyltransferase type 11 - - - 0.0000000000000000000007383 104.0
BYD3_k127_2712632_16 This enzyme acetylates the N-terminal alanine of ribosomal protein S18 K03789 - 2.3.1.128 0.000000000000000000003413 98.0
BYD3_k127_2712632_17 Glycosyl transferases group 1 - - - 0.0000000000000000002589 101.0
BYD3_k127_2712632_18 COG1214 Inactive homolog of metal-dependent proteases K01409,K14742 - 2.3.1.234 0.0000000000000004117 87.0
BYD3_k127_2712632_2 PFAM Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002774 323.0
BYD3_k127_2712632_20 COG2244 Membrane protein involved in the export of O-antigen and teichoic acid - - - 0.00000000002487 76.0
BYD3_k127_2712632_21 Protein of unknown function (DUF465) - - - 0.0000004058 55.0
BYD3_k127_2712632_22 PQQ enzyme repeat - - - 0.0000023 59.0
BYD3_k127_2712632_23 Uncharacterised nucleotidyltransferase - - - 0.0001062 53.0
BYD3_k127_2712632_24 - - - - 0.000995 51.0
BYD3_k127_2712632_3 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962 - 2.1.3.15,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001035 314.0
BYD3_k127_2712632_4 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 - 1.1.1.133 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003496 276.0
BYD3_k127_2712632_5 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001117 274.0
BYD3_k127_2712632_6 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose K03272,K21344 GO:0000271,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0006629,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008219,GO:0008610,GO:0008653,GO:0009058,GO:0009059,GO:0009103,GO:0009244,GO:0009311,GO:0009312,GO:0009987,GO:0012501,GO:0016051,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016779,GO:0019200,GO:0033692,GO:0033785,GO:0033786,GO:0034637,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0046401,GO:0046835,GO:0070566,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 2.7.1.167,2.7.7.70 0.000000000000000000000000000000000000000000000000000000000000000000000000002854 263.0
BYD3_k127_2712632_7 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate K03271 - 5.3.1.28 0.000000000000000000000000000000000000000000000000000000001638 213.0
BYD3_k127_2712632_8 PFAM Glycosyl transferase family 4 K02851,K13007 - 2.7.8.33,2.7.8.35 0.000000000000000000000000000000000000000000000000006326 194.0
BYD3_k127_2712632_9 Bacterial DNA polymerase III alpha subunit K02337 - 2.7.7.7 0.000000000000000000000000000000000000000000000292 180.0
BYD3_k127_2713074_0 PFAM UvrD REP helicase K03657 - 3.6.4.12 3.207e-209 677.0
BYD3_k127_2713074_1 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000467 428.0
BYD3_k127_2713074_10 SmpB protein K03664 GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0070930,GO:0071704,GO:1901564 - 0.00000000000000000000000000000000000000000001265 166.0
BYD3_k127_2713074_11 nudix family K01515 - 3.6.1.13 0.00000000000000000000000000000000000006505 149.0
BYD3_k127_2713074_12 PFAM thioesterase superfamily K07107 - - 0.0000000000000000000000000000000005653 137.0
BYD3_k127_2713074_13 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.00000000000000000003723 91.0
BYD3_k127_2713074_14 - - - - 0.0001528 51.0
BYD3_k127_2713074_2 Belongs to the universal ribosomal protein uS2 family K02967 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001933 327.0
BYD3_k127_2713074_3 Catalyzes the reversible phosphorylation of UMP to UDP K09903 GO:0003674,GO:0003824,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901576 2.7.4.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007648 308.0
BYD3_k127_2713074_4 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 GO:0001871,GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005623,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009986,GO:0009987,GO:0010467,GO:0019538,GO:0030246,GO:0030247,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:2001065 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000009413 266.0
BYD3_k127_2713074_5 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 - - 0.00000000000000000000000000000000000000000000000000000000000005153 218.0
BYD3_k127_2713074_6 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.00000000000000000000000000000000000000000000000000003372 190.0
BYD3_k127_2713074_7 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K01598,K13038 - 4.1.1.36,6.3.2.5 0.00000000000000000000000000000000000000000000000000017 191.0
BYD3_k127_2713074_8 Ribosomal protein S9/S16 K02996 - - 0.000000000000000000000000000000000000000000000002294 175.0
BYD3_k127_2713074_9 Isochorismatase family - - - 0.000000000000000000000000000000000000000000006775 169.0
BYD3_k127_2713739_0 FAD binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001252 355.0
BYD3_k127_2713739_1 PFAM Alcohol dehydrogenase zinc-binding domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003291 347.0
BYD3_k127_2713739_2 Male sterility protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001703 263.0
BYD3_k127_2713739_3 AcrB/AcrD/AcrF family K03296 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000443 272.0
BYD3_k127_2713739_4 DNA-templated transcription, initiation K03088 - - 0.0000000000000000000000006011 113.0
BYD3_k127_2713739_5 von Willebrand factor, type A - - - 0.0002202 53.0
BYD3_k127_2713921_0 Radical SAM - - - 2.441e-309 962.0
BYD3_k127_2713921_1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003279 460.0
BYD3_k127_2735855_0 Amidohydrolase family K06015 - 3.5.1.81 1.954e-226 714.0
BYD3_k127_2735855_1 X-Pro dipeptidyl-peptidase (S15 family) K01278 - 3.4.14.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002271 453.0
BYD3_k127_2796707_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 1.528e-295 947.0
BYD3_k127_2796707_1 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines - - - 0.00000000000000000000000000001185 123.0
BYD3_k127_2796707_2 Peptidylprolyl isomerase K03771 - 5.2.1.8 0.00000000000000000000000003413 121.0
BYD3_k127_2796707_3 RNA-binding S4 domain protein - - - 0.000000000000000002035 88.0
BYD3_k127_2796707_4 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 GO:0003674,GO:0003824,GO:0004812,GO:0004824,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006430,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.6 0.0000003925 58.0
BYD3_k127_2822665_0 Tetratricopeptide repeats K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002556 592.0
BYD3_k127_2822665_1 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 GO:0003674,GO:0003824,GO:0004719,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0010340,GO:0016740,GO:0016741,GO:0019538,GO:0032259,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0051998,GO:0071704,GO:0140096,GO:1901564 2.1.1.77 0.0000000000000000000000000000000000000000000000000000000000000007941 226.0
BYD3_k127_2822665_2 ECF sigma factor - - - 0.000000000000000000000000000000000000000000000000000001131 196.0
BYD3_k127_2822665_3 SNARE associated Golgi protein K03975 - - 0.0000000000000000000000000000000000000000000000002359 186.0
BYD3_k127_2822665_4 23S rRNA-intervening sequence protein - - - 0.00000000000000000000000308 106.0
BYD3_k127_2822665_5 acetoacetate metabolism regulatory protein AtoC K07714 K07713 - - 0.0008077 46.0
BYD3_k127_296450_0 Myo-inositol-1-phosphate synthase K01858 - 5.5.1.4 2.827e-210 661.0
BYD3_k127_296450_1 C-terminal, D2-small domain, of ClpB protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008853 436.0
BYD3_k127_296450_2 Cys/Met metabolism PLP-dependent enzyme K01760,K17217 GO:0000096,GO:0000098,GO:0003674,GO:0003824,GO:0003962,GO:0004123,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008284,GO:0009056,GO:0009063,GO:0009987,GO:0016054,GO:0016740,GO:0016765,GO:0016829,GO:0016846,GO:0019752,GO:0042127,GO:0043418,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044273,GO:0044281,GO:0044282,GO:0044424,GO:0044464,GO:0046395,GO:0048518,GO:0048522,GO:0050667,GO:0050789,GO:0050794,GO:0065007,GO:0071704,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 4.4.1.1,4.4.1.2,4.4.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001493 346.0
BYD3_k127_296450_3 Protein involved in outer membrane biogenesis - - - 0.0000000000000000000000000000000000000000000000000000000000000000000006073 266.0
BYD3_k127_296450_4 PFAM Hemolysin-type calcium-binding region - - - 0.000000000000000000000000000000000000001509 170.0
BYD3_k127_296450_5 helix_turn_helix, Arsenical Resistance Operon Repressor K03892 - - 0.00000000000000000000004119 108.0
BYD3_k127_296450_6 FtsJ-like methyltransferase K06442 - 2.1.1.226,2.1.1.227 0.000000000000000216 83.0
BYD3_k127_2970777_0 Lecithin:cholesterol acyltransferase - - - 0.00000000000000000000000000000000000000000006491 177.0
BYD3_k127_2970777_1 function for this protein is to guide the assembly of the membrane sector of the ATPase enzyme complex K02116 - - 0.0001335 49.0
BYD3_k127_2970777_2 Glycosyl transferase family 21 - - - 0.0005734 46.0
BYD3_k127_2985574_0 Carboxypeptidase regulatory-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004538 510.0
BYD3_k127_2985574_1 Histidine kinase K08082 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000008786 221.0
BYD3_k127_2985574_2 response regulator K02477 - - 0.00000000000000000000000000000000000000000000000000000000004916 214.0
BYD3_k127_2985574_3 Protein of unknown function (DUF1223) - - - 0.0000000000000000000000000000000000000000312 162.0
BYD3_k127_2985574_4 PFAM 6-pyruvoyl tetrahydropterin K01737 - 4.1.2.50,4.2.3.12 0.0000000000000000000000000000000006016 134.0
BYD3_k127_2985574_5 HELICc2 K03722 - 3.6.4.12 0.000000000000000000000002938 104.0
BYD3_k127_2985574_6 LAGLIDADG-like domain - - - 0.000002134 56.0
BYD3_k127_3070447_0 SdhA B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC D which are the membrane components and form cytochrome b556 K00239 GO:0003674,GO:0003824,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009061,GO:0009987,GO:0015980,GO:0016491,GO:0022900,GO:0044237,GO:0045333,GO:0055114 1.3.5.1,1.3.5.4 2.77e-267 837.0
BYD3_k127_3070447_1 Zinc metalloprotease (Elastase) K20274 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002359 364.0
BYD3_k127_3070447_10 N-terminal half of MaoC dehydratase K17865 - 4.2.1.55 0.0000000000000000000000000000000000305 138.0
BYD3_k127_3070447_11 Belongs to the glycosyl hydrolase 32 family K01193 - 3.2.1.26 0.00000000000000000000000000000004503 146.0
BYD3_k127_3070447_12 Belongs to the glycosyl hydrolase 32 family K01193 - 3.2.1.26 0.0000000000000000000000000000002986 143.0
BYD3_k127_3070447_13 PFAM S23 ribosomal protein - - - 0.0000000000000000000000000000004637 125.0
BYD3_k127_3070447_14 sigma factor antagonist activity K04757 - 2.7.11.1 0.0000000000343 77.0
BYD3_k127_3070447_15 antisigma factor binding - - - 0.00000002131 60.0
BYD3_k127_3070447_2 Zinc metalloprotease (Elastase) K20274 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006324 340.0
BYD3_k127_3070447_3 Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family K00240,K00245 GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016020,GO:0022900,GO:0022904,GO:0044237,GO:0044464,GO:0045333,GO:0055114,GO:0071944 1.3.5.1,1.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012 302.0
BYD3_k127_3070447_4 COGs COG5001 signal transduction protein containing a membrane domain an EAL and a GGDEF domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002958 289.0
BYD3_k127_3070447_5 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000002524 247.0
BYD3_k127_3070447_6 diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000003635 242.0
BYD3_k127_3070447_7 PFAM Metal-dependent phosphohydrolase, HD - - - 0.0000000000000000000000000000000000000000000004452 183.0
BYD3_k127_3070447_8 TIGRFAM succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family K00241 - - 0.000000000000000000000000000000000000000000000517 175.0
BYD3_k127_3070447_9 Domain of unknown function (DUF2383) - - - 0.0000000000000000000000000000000000000000001073 166.0
BYD3_k127_3106463_0 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000278 361.0
BYD3_k127_3106463_1 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 0.00000000000000000000000000000000000000000000001833 192.0
BYD3_k127_3106463_2 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 - 0.0000000000000005561 78.0
BYD3_k127_3106463_3 PFAM Single-stranded nucleic acid binding R3H K06346 - - 0.000000000000001145 83.0
BYD3_k127_3212480_0 TIGRFAM FeS assembly ATPase SufC K09013 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001005 374.0
BYD3_k127_3212480_1 isomerase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004404 327.0
BYD3_k127_3212480_2 Sigma factor PP2C-like phosphatases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000009845 257.0
BYD3_k127_3212480_3 oxidation-reduction process K09022 - 3.5.99.10 0.0000000000000000000000000000000000000003712 153.0
BYD3_k127_3212480_4 Uncharacterized protein family (UPF0051) K09014 - - 0.00000000000000000000009663 97.0
BYD3_k127_3212480_5 Nicotinamide mononucleotide transporter - - - 0.00000000000008086 74.0
BYD3_k127_3212480_6 FeS assembly protein SufD K09015 - - 0.0000001587 55.0
BYD3_k127_3212480_7 transcriptional regulator - - - 0.0000003293 58.0
BYD3_k127_3221218_0 Valyl tRNA synthetase tRNA binding arm K01873 GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007874 439.0
BYD3_k127_3221218_1 Belongs to the NadC ModD family K00767,K03813 - 2.4.2.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001083 289.0
BYD3_k127_3221218_2 PFAM Abortive infection protein K07052 - - 0.00000000000000000000000000000000003091 146.0
BYD3_k127_3221218_3 signal transduction histidine kinase - - - 0.000000000000009597 78.0
BYD3_k127_324640_0 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140101,GO:0140102,GO:1901360 2.1.1.192 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000254 289.0
BYD3_k127_324640_1 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.00000000000000000000000000000000000000000000000000000006018 205.0
BYD3_k127_324640_2 - - - - 0.0000000000000000000000000000000000000000000000000000001024 200.0
BYD3_k127_324640_3 Pfam Polyketide cyclase dehydrase and lipid transport - - - 0.0000000000000000000000000000000000000000004462 164.0
BYD3_k127_3252848_0 peptidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005967 414.0
BYD3_k127_3252848_1 amine dehydrogenase activity K20276 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002218 415.0
BYD3_k127_3252848_10 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000004334 171.0
BYD3_k127_3252848_11 PFAM alpha beta hydrolase fold - - - 0.0000000000000000000000000000000000000000007318 169.0
BYD3_k127_3252848_12 PFAM O-methyltransferase K00588 - 2.1.1.104 0.00000000000000000000000000000000000000002266 156.0
BYD3_k127_3252848_13 Belongs to the glycosyl hydrolase 32 family K00692 - 2.4.1.10 0.0000000000000000000000000000000003472 148.0
BYD3_k127_3252848_14 repeat protein - - - 0.00000000000000000000000000000007376 140.0
BYD3_k127_3252848_15 Amino-transferase class IV K02619 - 4.1.3.38 0.000000000000000000000000000006293 129.0
BYD3_k127_3252848_16 cAMP biosynthetic process - - - 0.0000000000000000000001417 113.0
BYD3_k127_3252848_17 cAMP biosynthetic process - - - 0.00000000000000001295 98.0
BYD3_k127_3252848_18 Modulates RecA activity K03565 - - 0.00000005758 61.0
BYD3_k127_3252848_2 Serine aminopeptidase, S33 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006101 397.0
BYD3_k127_3252848_3 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003919 355.0
BYD3_k127_3252848_4 Secreted and surface protein containing fasciclin-like repeats - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001055 255.0
BYD3_k127_3252848_5 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016556,GO:0016853,GO:0016866,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1990481 5.4.99.25 0.00000000000000000000000000000000000000000000000000000000000000772 226.0
BYD3_k127_3252848_6 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.0000000000000000000000000000000000000000000000000000008274 210.0
BYD3_k127_3252848_7 PFAM Methionine sulfoxide reductase B K07305 - 1.8.4.12 0.0000000000000000000000000000000000000000000000000001501 192.0
BYD3_k127_3252848_8 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.00000000000000000000000000000000000000000000000009457 194.0
BYD3_k127_3252848_9 Protein kinase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000005058 198.0
BYD3_k127_3276739_0 Belongs to the MurCDEF family K01924 - 6.3.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001151 506.0
BYD3_k127_3276739_1 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005 397.0
BYD3_k127_3276739_2 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008868 329.0
BYD3_k127_3276739_3 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008891 317.0
BYD3_k127_3276739_4 Belongs to the SEDS family K03588 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007965 285.0
BYD3_k127_3276739_5 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.00000000000000000000000000000000000000000000000000000000000000000000002894 246.0
BYD3_k127_3276739_6 Cell division protein FtsQ K03589 - - 0.0000000003033 70.0
BYD3_k127_3291009_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 1.746e-223 714.0
BYD3_k127_3291009_1 Multidrug ABC transporter ATP-binding protein K06158 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008502 458.0
BYD3_k127_3291009_10 PFAM Biopolymer transport protein ExbD TolR K03559 - - 0.0000000000000003155 85.0
BYD3_k127_3291009_11 TIGRFAM TonB K03832 - - 0.000000000000007428 84.0
BYD3_k127_3291009_12 Preprotein translocase, YajC subunit K03210 - - 0.00000000000001078 78.0
BYD3_k127_3291009_13 - - - - 0.0000000000001835 74.0
BYD3_k127_3291009_14 Tetratricopeptide repeat - - - 0.00002802 55.0
BYD3_k127_3291009_2 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001286 374.0
BYD3_k127_3291009_3 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.000000000000000000000000000000000000000000000000000000000000000000000001285 250.0
BYD3_k127_3291009_4 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.0000000000000000000000000000000000000000000000000000000000000000000107 246.0
BYD3_k127_3291009_5 MotA TolQ ExbB proton channel K03561,K03562 - - 0.00000000000000000000000000000000000000000000000000000000000000001203 232.0
BYD3_k127_3291009_6 endoribonuclease L-PSP K09022 - 3.5.99.10 0.000000000000000000000000000000000000000000001674 168.0
BYD3_k127_3291009_7 Belongs to the bacterial ribosomal protein bL28 family K02902 GO:0003674,GO:0003735,GO:0005198 - 0.00000000000000000000002084 102.0
BYD3_k127_3291009_8 PFAM Biopolymer transport protein ExbD TolR K03559,K03560 - - 0.000000000000000000003413 98.0
BYD3_k127_3291009_9 peptidylprolyl isomerase K03769 - 5.2.1.8 0.00000000000000004094 94.0
BYD3_k127_3319036_0 M61 glycyl aminopeptidase - - - 0.0001061 55.0
BYD3_k127_3338524_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 1.871e-284 895.0
BYD3_k127_3338524_1 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP K03629 - - 0.000000000000000000000000000000000000000000000000000000001177 214.0
BYD3_k127_3338524_2 oxidoreductase activity - - - 0.0000000000000000000000003113 121.0
BYD3_k127_3338524_3 Thiol-disulfide isomerase and thioredoxins - - - 0.00000000000000000006789 96.0
BYD3_k127_3338524_4 Bacterial regulatory proteins, tetR family K13770 - - 0.0000000000000000001167 92.0
BYD3_k127_3458259_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 - 2.7.7.6 0.0 1887.0
BYD3_k127_3458259_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 - 2.7.7.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003436 527.0
BYD3_k127_3458259_2 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008877 291.0
BYD3_k127_3458259_3 Participates in transcription elongation, termination and antitermination K02601 - - 0.00000000000000000000000000000000000000000000000000000000000562 212.0
BYD3_k127_3458259_4 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 - - 0.000000000000000000000000000000000000000000000000000000004094 202.0
BYD3_k127_3458259_5 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 - - 0.00000000000000000000000000000000000000000000326 172.0
BYD3_k127_3458259_6 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.00000000000000000000000000000000000001304 148.0
BYD3_k127_3458259_7 Belongs to the bacterial ribosomal protein bL33 family K02913 - - 0.00000000000000004153 81.0
BYD3_k127_3458259_8 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.00000000000000004407 80.0
BYD3_k127_3458259_9 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation K03073 - - 0.0001065 48.0
BYD3_k127_3564376_0 Acyl-coa dehydrogenase K00249 - 1.3.8.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007635 575.0
BYD3_k127_3564376_1 Type IV pilus assembly protein PilM; K02662 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004985 302.0
BYD3_k127_3564376_2 dextransucrase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003263 276.0
BYD3_k127_3564376_3 type IV pilus secretin PilQ K02507,K02666 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006139,GO:0006259,GO:0006308,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0015976,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901575 - 0.0000000000000000000000000000000000000000000000000000000007251 222.0
BYD3_k127_3564376_4 PFAM Pilus assembly protein PilO K02664 - - 0.000001817 57.0
BYD3_k127_3564376_5 LssY C-terminus - - - 0.00008364 53.0
BYD3_k127_3574380_0 O-methyltransferase K09846 - 2.1.1.210 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006761 461.0
BYD3_k127_3574380_1 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005223 333.0
BYD3_k127_3574380_2 histone H4-K16 acetylation K07020 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001004 280.0
BYD3_k127_3574380_3 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005751 263.0
BYD3_k127_3574380_4 response to abiotic stimulus K06867 - - 0.0000000000000000000000000000000000000000000000000000000000000001501 225.0
BYD3_k127_3574380_5 PFAM Response regulator receiver domain - - - 0.000000000000000000000000000000000000000000000000000000000000001429 222.0
BYD3_k127_3574380_6 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000001045 192.0
BYD3_k127_3576586_0 virulence factor MVIN family protein K03980 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006572 422.0
BYD3_k127_3576586_1 PFAM tRNA synthetase class II (G H P and S) K01892 - 6.1.1.21 0.000000000000000000000000000000000000000000000000000000000000000000003147 243.0
BYD3_k127_3576586_2 Bacterial transferase hexapeptide (six repeats) - - - 0.000000000000000000000000000000000000000000000000000000007667 204.0
BYD3_k127_3576586_3 Lipid A 3-O-deacylase (PagL) - - - 0.000000000002134 75.0
BYD3_k127_358284_0 Penicillin-binding Protein K05364 - - 0.00000000000000000000000000000000000002886 164.0
BYD3_k127_358284_1 serine threonine protein kinase K12132 - 2.7.11.1 0.000000000000000000000000000004433 136.0
BYD3_k127_358284_2 - - - - 0.000000000000000000000000003202 119.0
BYD3_k127_358284_3 Inner membrane component of T3SS, cytoplasmic domain - - - 0.0000004569 61.0
BYD3_k127_3603368_0 PFAM UDP-galactopyranose mutase, C-terminal K01854 - 5.4.99.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004007 597.0
BYD3_k127_3603368_1 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003101 433.0
BYD3_k127_3603368_10 IstB-like ATP binding protein K02315 - - 0.00000000000000000000000000000000000000000000000000000000000002727 224.0
BYD3_k127_3603368_11 Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P) K00849 - 2.7.1.6 0.000000000000000000000000000000000000000000000000000000007364 206.0
BYD3_k127_3603368_12 Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain K17247 - - 0.000000000000000000000000000000000000000000000000003542 188.0
BYD3_k127_3603368_13 photoreceptor activity - - - 0.00000000000000000000000000000000000000000000000004605 203.0
BYD3_k127_3603368_14 CRP FNR family - - - 0.000000000000000000000000000000398 133.0
BYD3_k127_3603368_15 transcriptional regulator - - - 0.00000000009771 70.0
BYD3_k127_3603368_2 Polysaccharide biosynthesis protein K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001994 426.0
BYD3_k127_3603368_3 PFAM Galactose-1-phosphate uridyl transferase K00965 - 2.7.7.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000265 417.0
BYD3_k127_3603368_4 6-phospho-beta-galactosidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006681 404.0
BYD3_k127_3603368_5 creatininase K01470 - 3.5.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009793 391.0
BYD3_k127_3603368_6 PFAM AAA ATPase central domain protein K07478 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001764 389.0
BYD3_k127_3603368_7 N-terminal domain of Peptidase_S41 in eukaryotic IRBP - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005302 338.0
BYD3_k127_3603368_8 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K13924 - 2.1.1.80,3.1.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003242 314.0
BYD3_k127_3603368_9 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000003713 225.0
BYD3_k127_361022_0 Peptidase M50 - - - 0.0000000000000000000000000000000000000000002906 173.0
BYD3_k127_361022_1 Ethanolamine utilisation protein EutA K03569 - - 0.000000000000000000001665 98.0
BYD3_k127_361022_2 PFAM von Willebrand factor type A - - - 0.0001488 53.0
BYD3_k127_3610614_0 Mn2 and Fe2 transporters of the NRAMP family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005189 460.0
BYD3_k127_3610614_1 PFAM binding-protein-dependent transport systems inner membrane component K02034 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007605 317.0
BYD3_k127_3610614_2 PFAM binding-protein-dependent transport systems inner membrane component K02033 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000009443 294.0
BYD3_k127_3610614_3 Belongs to the UPF0271 (lamB) family K07160 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000008506 287.0
BYD3_k127_3610614_4 PFAM Allophanate hydrolase subunit 2 K06350 - - 0.00000000000000000000000000000000000000000000000000000000000000000001878 243.0
BYD3_k127_3610614_5 Allophanate hydrolase subunit 1 K06351 - - 0.00000000000000000000000000000000000000000000000000005238 195.0
BYD3_k127_3610614_6 von Willebrand factor, type A - - - 0.00000000000000000000000118 115.0
BYD3_k127_3610614_7 - - - - 0.000000000000000000000001212 106.0
BYD3_k127_3610614_8 InterPro IPR007367 K01156 - 3.1.21.5 0.000000000000000000003797 95.0
BYD3_k127_3610614_9 - - - - 0.00000005064 59.0
BYD3_k127_3615005_0 PFAM AMP-dependent synthetase and ligase K01897,K22319 - 6.1.3.1,6.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004997 535.0
BYD3_k127_3615005_1 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005432 507.0
BYD3_k127_3615005_10 PFAM Penicillinase repressor - - - 0.00000000000000000000000000007044 123.0
BYD3_k127_3615005_11 PFAM Polysaccharide deacetylase - - - 0.00000000000000000000000346 119.0
BYD3_k127_3615005_12 Putative peptidoglycan binding domain - - - 0.0000000000741 73.0
BYD3_k127_3615005_13 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000007785 61.0
BYD3_k127_3615005_2 Domain of unknown function (DUF1731) K07071 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004898 314.0
BYD3_k127_3615005_3 arylformamidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001885 253.0
BYD3_k127_3615005_4 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.0000000000000000000000000000000000000000000000000000000000000000001032 243.0
BYD3_k127_3615005_5 PFAM periplasmic binding protein K02016 - - 0.000000000000000000000000000000000000000000000003046 184.0
BYD3_k127_3615005_6 PFAM Peptidase M56, BlaR1 - - - 0.0000000000000000000000000000000000000000002492 180.0
BYD3_k127_3615005_7 Activator of Hsp90 ATPase 1 family protein - - - 0.000000000000000000000000000000000000000000349 162.0
BYD3_k127_3615005_8 PFAM peptidase M15B and M15C DD-carboxypeptidase VanY endolysin - - - 0.00000000000000000000000000000000006994 145.0
BYD3_k127_3615005_9 ATPases associated with a variety of cellular activities K02013 - 3.6.3.34 0.0000000000000000000000000000000001878 137.0
BYD3_k127_36212_0 TIGRFAM proton-translocating NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004759 523.0
BYD3_k127_36212_1 NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit K00341 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005917 526.0
BYD3_k127_36212_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007656 426.0
BYD3_k127_36212_3 Chloramphenicol acetyltransferase K19271 - 2.3.1.28 0.000000000000000000000000000000000000000000000003713 179.0
BYD3_k127_3639906_0 Short repeat of unknown function (DUF308) - - - 0.0000000000000000000000000000000000000000000000004067 182.0
BYD3_k127_3639906_1 Glyoxalase-like domain - - - 0.0000000000000000000000002057 112.0
BYD3_k127_3639906_2 Ion channel K10716 - - 0.000000000000000000003634 97.0
BYD3_k127_3639906_3 Family of unknown function (DUF5335) - - - 0.000000000003309 74.0
BYD3_k127_3639906_4 - - - - 0.0000105 53.0
BYD3_k127_3640548_0 C-terminal domain of 1-Cys peroxiredoxin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000015 360.0
BYD3_k127_3640548_1 NeuB family K03856 - 2.5.1.54 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001127 350.0
BYD3_k127_3640548_2 Ion transport protein K10716 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007177 326.0
BYD3_k127_3640548_3 Transporter associated domain - - - 0.000000000000000000000000000000000000000000000000000000000008913 223.0
BYD3_k127_3640548_4 Prephenate dehydratase K04518,K14170 - 4.2.1.51,5.4.99.5 0.0000000000000000000000000000002673 131.0
BYD3_k127_3640548_5 LmbE family - - - 0.000000000000000000000000000000819 123.0
BYD3_k127_3640548_6 Biotin-requiring enzyme - - - 0.00000000000000000000001696 107.0
BYD3_k127_3640548_7 Chorismate mutase type II K14170 - 4.2.1.51,5.4.99.5 0.00000006025 58.0
BYD3_k127_36440_0 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008265 332.0
BYD3_k127_36440_1 Toxic component of a toxin-antitoxin (TA) module K07171 - - 0.000000000000000000000000000004059 122.0
BYD3_k127_36440_4 PFAM SpoVT AbrB K07172,K18842 - - 0.00000000004691 66.0
BYD3_k127_3651936_0 Belongs to the FPP GGPP synthase family K13787,K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003282 399.0
BYD3_k127_3651936_1 Serine threonine protein kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000344 274.0
BYD3_k127_3651936_2 serine-type endopeptidase activity K07261 - - 0.000000004046 67.0
BYD3_k127_3651936_3 - - - - 0.00001612 52.0
BYD3_k127_3659335_0 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2 K00162 - 1.2.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000905 419.0
BYD3_k127_3659335_1 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00161,K11381 - 1.2.4.1,1.2.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002287 365.0
BYD3_k127_3659335_2 Cytochrome c biogenesis protein transmembrane region K04084 - 1.8.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001202 345.0
BYD3_k127_3659335_3 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00627 - 2.3.1.12 0.00000008698 55.0
BYD3_k127_377236_0 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01916,K01950 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008795,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016874,GO:0016879,GO:0016880,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.1.5,6.3.5.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002329 443.0
BYD3_k127_377236_1 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 GO:0003674,GO:0003824,GO:0004311,GO:0004659,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0015980,GO:0016020,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044464,GO:0045333,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:0071944,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.141 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002729 278.0
BYD3_k127_377236_2 Domain of unknown function (DUF374) K09778 - - 0.0000000000000000000000000000000000000000000000000004185 192.0
BYD3_k127_377236_3 ribosomal RNA methyltransferase RrmJ FtsJ K06442 - 2.1.1.226,2.1.1.227 0.000000000000000000000000000000000000000000002002 168.0
BYD3_k127_377236_4 Histidine kinase-like ATPase domain - - - 0.000000000000000000000000000001222 131.0
BYD3_k127_3773855_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 1.798e-293 921.0
BYD3_k127_3773855_1 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 1.418e-223 700.0
BYD3_k127_3773855_2 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002281 527.0
BYD3_k127_3773855_3 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 - 2.4.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003425 384.0
BYD3_k127_3773855_4 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0008150,GO:0016020,GO:0030312,GO:0040007,GO:0044424,GO:0044444,GO:0044464,GO:0071944 3.4.21.92 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000779 284.0
BYD3_k127_3773855_5 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 - - 0.00000000000000000000000000000000000000000000000000000000000008242 231.0
BYD3_k127_3773855_6 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 GO:0003674,GO:0003824,GO:0004019,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0015949,GO:0016874,GO:0016879,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033554,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046033,GO:0046040,GO:0046085,GO:0046086,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0050896,GO:0051716,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.4.4 0.0000000000000000000000000000000000000000000000000000000006416 204.0
BYD3_k127_3773855_7 Necessary for normal cell division and for the maintenance of normal septation K03978 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000008879 200.0
BYD3_k127_3773855_8 epimerase K21568 - 1.23.1.1,1.23.1.2,1.23.1.3,1.23.1.4 0.000000000000000000000000000000000000000000000000000000444 205.0
BYD3_k127_3773855_9 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000002029 147.0
BYD3_k127_3807474_0 AcrB/AcrD/AcrF family K03296 - - 0.0 1205.0
BYD3_k127_3807474_1 Substrate binding domain of ABC-type glycine betaine transport system K05845,K05846 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001099 448.0
BYD3_k127_3807474_2 DEAD-box RNA helicase involved in ribosome assembly. Has RNA-dependent ATPase activity and unwinds double-stranded RNA K11927 - 3.6.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001815 380.0
BYD3_k127_3807474_3 FAD binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000001778 228.0
BYD3_k127_3807474_4 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.000000000000000000000000000000000000000000000000004854 198.0
BYD3_k127_3807474_5 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000000007091 147.0
BYD3_k127_3807474_6 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) - - - 0.000006732 54.0
BYD3_k127_3813175_0 DNA-directed DNA polymerase K02337 - 2.7.7.7 2.6e-207 665.0
BYD3_k127_3813175_1 S-adenosyl-L-homocysteine hydrolase, NAD binding domain K01251 GO:0000096,GO:0003674,GO:0003824,GO:0004013,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009069,GO:0009116,GO:0009119,GO:0009987,GO:0016787,GO:0016801,GO:0016802,GO:0017144,GO:0019752,GO:0033353,GO:0034641,GO:0042278,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046128,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564,GO:1901605,GO:1901657 3.3.1.1 5.206e-198 624.0
BYD3_k127_3813175_10 Bifunctional nuclease K08999 - - 0.000000000000000000000000000000000000000008723 159.0
BYD3_k127_3813175_11 Involved in DNA repair and RecF pathway recombination K03474,K03584 GO:0008150,GO:0009314,GO:0009628,GO:0050896 2.6.99.2 0.000000000000000000000000000000000007108 145.0
BYD3_k127_3813175_12 Transcriptional regulatory protein, C terminal - - - 0.000000000000000001413 90.0
BYD3_k127_3813175_13 - - - - 0.000000000000003439 80.0
BYD3_k127_3813175_2 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 - 2.5.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001248 543.0
BYD3_k127_3813175_3 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004627 356.0
BYD3_k127_3813175_4 Cobyrinic acid ac-diamide synthase K03496 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005071 273.0
BYD3_k127_3813175_5 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001134 258.0
BYD3_k127_3813175_6 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 - 3.4.25.2 0.00000000000000000000000000000000000000000000000000000000000000005815 226.0
BYD3_k127_3813175_7 peptidase C26 K07010 - - 0.0000000000000000000000000000000000000000000000000000247 197.0
BYD3_k127_3813175_8 chromosome segregation K03497 - - 0.000000000000000000000000000000000000000000000000001035 195.0
BYD3_k127_3813175_9 Permease, YjgP YjgQ - - - 0.000000000000000000000000000000000000000000000746 190.0
BYD3_k127_381887_0 Two component regulator propeller - - - 0.000000000000000000000000000000000000000000003566 189.0
BYD3_k127_383305_0 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006197 424.0
BYD3_k127_383305_1 two component, sigma54 specific, transcriptional regulator, Fis family K02481 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002107 382.0
BYD3_k127_383305_2 Sulfatase - - - 0.000000000000000000000000005703 127.0
BYD3_k127_383305_3 6-pyruvoyl-tetrahydropterin synthase related domain; membrane protein - - - 0.00000000000000000000006282 114.0
BYD3_k127_383305_4 response to antibiotic - - - 0.00000000007519 67.0
BYD3_k127_3905782_0 ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002585 254.0
BYD3_k127_3905782_1 PFAM cytochrome c oxidase subunit III K02276 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000002186 203.0
BYD3_k127_3905782_2 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 - 1.9.3.1 0.000000000000000000000000000000000000000000000000005991 183.0
BYD3_k127_3905782_3 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) - - - 0.000000000000001968 88.0
BYD3_k127_3905782_4 Prokaryotic Cytochrome C oxidase subunit IV K02277 - 1.9.3.1 0.0000000001237 66.0
BYD3_k127_3905782_5 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) - - - 0.0001255 52.0
BYD3_k127_3941828_0 Prolyl oligopeptidase family - - - 9.793e-202 649.0
BYD3_k127_3941828_1 aminopeptidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003058 458.0
BYD3_k127_3941828_2 aminopeptidase K01256 - 3.4.11.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004204 379.0
BYD3_k127_3941828_3 Tricorn protease homolog K08676 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004522 317.0
BYD3_k127_3941828_4 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002405 317.0
BYD3_k127_3941828_5 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006036 282.0
BYD3_k127_3941828_6 Protein of unknown function (DUF420) K08976 - - 0.00000000000000000000000000000000000004 147.0
BYD3_k127_3941828_7 PFAM cytochrome c oxidase subunit III K02276 - 1.9.3.1 0.000000000000000000000000001925 121.0
BYD3_k127_3941828_8 Peptidase family M28 - - - 0.000000000006074 68.0
BYD3_k127_3941828_9 PFAM ResB family protein K07399 - - 0.0006584 46.0
BYD3_k127_3976791_0 Carbamoyltransferase C-terminus K00612 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001815 417.0
BYD3_k127_3976791_1 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002535 305.0
BYD3_k127_3976791_2 Domain of unknown function (DUF4126) - - - 0.00000000000000000000000000000000009187 138.0
BYD3_k127_3991809_0 hydrolase activity, acting on ester bonds - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000283 310.0
BYD3_k127_3991809_1 PFAM Na-Ca exchanger integrin-beta4 peptidase-like FG-GAP K20276 - - 0.00000000000000000000000000000000000000000000000000000000000000000005438 256.0
BYD3_k127_3991809_2 dihydrofolate reductase activity K00287 - 1.5.1.3 0.000000000000000000000000000000000000000000000000000000000000000004451 231.0
BYD3_k127_3991809_3 DinB superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000006762 219.0
BYD3_k127_3991809_4 mRNA catabolic process - - - 0.0000000000000000000000000000000000000000000000000000009084 196.0
BYD3_k127_3991809_5 HYR domain - - - 0.00000000000000000000000000000000001039 156.0
BYD3_k127_3991809_6 amidohydrolase - - - 0.000000000000000002119 99.0
BYD3_k127_3991809_7 Cro/C1-type HTH DNA-binding domain - - - 0.000000002111 65.0
BYD3_k127_4014891_0 aminopeptidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007299 422.0
BYD3_k127_4014891_1 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001722 338.0
BYD3_k127_4014891_10 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000003891 173.0
BYD3_k127_4014891_11 - K07018 - - 0.0000000000000000000000000000000000000000000004116 175.0
BYD3_k127_4014891_12 AI-2E family transporter - GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008150,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944 - 0.000000000000000000000000000000000004148 152.0
BYD3_k127_4014891_13 2Fe-2S iron-sulfur cluster binding domain - - - 0.0000000000000000000000000000000005819 133.0
BYD3_k127_4014891_14 Thioesterase superfamily protein K10806 - - 0.00000000000000000000000000007505 119.0
BYD3_k127_4014891_15 peptidase - - - 0.000000000000000000000001449 106.0
BYD3_k127_4014891_16 Predicted membrane protein (DUF2085) - - - 0.00000000000000000000015 105.0
BYD3_k127_4014891_17 acetylesterase activity - - - 0.000000000000009219 80.0
BYD3_k127_4014891_19 - - - - 0.000000001674 62.0
BYD3_k127_4014891_2 Belongs to the peptidase S8 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006098 334.0
BYD3_k127_4014891_20 - - - - 0.00001107 58.0
BYD3_k127_4014891_3 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007 - 2.7.9.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002977 300.0
BYD3_k127_4014891_4 Protein of unknown function (DUF1009) K09949 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001712 302.0
BYD3_k127_4014891_5 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.000000000000000000000000000000000000000000000000000000000000000000000000000001061 272.0
BYD3_k127_4014891_6 tRNA pseudouridine synthase K06173 - 5.4.99.12 0.000000000000000000000000000000000000000000000000000000000000000000000000001428 261.0
BYD3_k127_4014891_7 Belongs to the Dps family K03594 - 1.16.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000102 239.0
BYD3_k127_4014891_8 Superoxide dismutase K00518 - 1.15.1.1 0.000000000000000000000000000000000000000000000000000000000000000005352 229.0
BYD3_k127_4014891_9 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.0000000000000000000000000000000000000000000000004273 189.0
BYD3_k127_4015518_0 von Willebrand factor (vWF) type A domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005016 446.0
BYD3_k127_4015518_1 Belongs to the N(4) N(6)-methyltransferase family K00590 - 2.1.1.113 0.0000000000000000000000000000000000000000000000000000000000000001335 231.0
BYD3_k127_4015518_2 NurA - - - 0.000000000000000000000000000000000000000000000000000000000004283 222.0
BYD3_k127_4015518_3 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.000000000000000000000000000000000000000004204 163.0
BYD3_k127_4015518_4 - - - - 0.0000000000000000000000000000000000009655 146.0
BYD3_k127_4041069_0 haloacid dehalogenase-like hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003404 250.0
BYD3_k127_4041069_1 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.0000000000000000000000000000000000000000000000000002863 191.0
BYD3_k127_4041069_2 Domain of unknown function (DUF2088) - - - 0.000000000000000000000000000000000000000000000000001187 186.0
BYD3_k127_4041069_3 Tetratricopeptide repeat - - - 0.0000000000000000000003073 107.0
BYD3_k127_4041069_4 Glyoxalase-like domain - - - 0.0000000000000000005242 89.0
BYD3_k127_404869_0 Dienelactone hydrolase family - - - 3.534e-265 840.0
BYD3_k127_404869_1 Putative diguanylate phosphodiesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002432 629.0
BYD3_k127_404869_2 Amino acid permease K03294 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004612 350.0
BYD3_k127_404869_3 PFAM peptidase M19 renal dipeptidase K01273 - 3.4.13.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000001387 272.0
BYD3_k127_404869_4 Alternative locus ID - - - 0.00000000000000000000000000000000000000000000000000000000000003813 226.0
BYD3_k127_406102_0 coproporphyrinogen oxidase activity K02495 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006782,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016491,GO:0016627,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0046501,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0051989,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 1.3.98.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000019 530.0
BYD3_k127_406102_1 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 GO:0003674,GO:0003824,GO:0004853,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006536,GO:0006725,GO:0006778,GO:0006779,GO:0006780,GO:0006782,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009064,GO:0009987,GO:0016053,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019353,GO:0019438,GO:0019752,GO:0033013,GO:0033014,GO:0033526,GO:0034641,GO:0042168,GO:0042440,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046394,GO:0046483,GO:0046501,GO:0046502,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 4.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001661 448.0
BYD3_k127_406102_2 Phosphoenolpyruvate phosphomutase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004176 335.0
BYD3_k127_406102_3 PFAM peptidase S1 and S6, chymotrypsin Hap K04771 - 3.4.21.107 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001136 334.0
BYD3_k127_406102_4 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 - 2.5.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007852 317.0
BYD3_k127_406102_5 transcriptional - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001434 303.0
BYD3_k127_406102_6 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.0000000000000000000000000000000000000000000000000000000000000000000006529 252.0
BYD3_k127_406102_7 SnoaL-like domain - - - 0.00000000000000000001342 97.0
BYD3_k127_406102_8 Uroporphyrin-III C tetrapyrrole (Corrin Porphyrin) methyltransferase K02302,K02303,K13542 - 1.3.1.76,2.1.1.107,4.2.1.75,4.99.1.4 0.000000000000512 79.0
BYD3_k127_4167259_0 2-oxoglutarate dehydrogenase, E1 K00164 - 1.2.4.2 0.0 1223.0
BYD3_k127_4167259_1 RmlD substrate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005116 435.0
BYD3_k127_4167259_2 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 GO:0000906,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.78 0.00000000000000000000000000000000000000000000000000000002104 203.0
BYD3_k127_4167259_3 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.00000000000000000000000000000000000000000000000000002244 205.0
BYD3_k127_4167259_4 RDD family - - - 0.0000000000000000000000000000000000000000003514 169.0
BYD3_k127_4167259_5 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.000000000000000000000000000000465 128.0
BYD3_k127_4174867_0 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S K00311 - 1.5.5.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001885 613.0
BYD3_k127_4174867_1 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 - 5.3.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007719 410.0
BYD3_k127_4174867_2 tigr00255 - - - 0.000000000000000000000000000000000000000000000000000000001017 211.0
BYD3_k127_4174867_3 Appr-1'-p processing enzyme - - - 0.000000000000000000000000000000000000000000000000000000003132 203.0
BYD3_k127_4174867_4 Essential for recycling GMP and indirectly, cGMP K00942 GO:0003674,GO:0003824,GO:0004385,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009126,GO:0009132,GO:0009135,GO:0009150,GO:0009161,GO:0009165,GO:0009167,GO:0009179,GO:0009185,GO:0009259,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0042278,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046037,GO:0046128,GO:0046483,GO:0046710,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.4.8 0.000000000000000000000000000000000000000000000000000002822 198.0
BYD3_k127_4174867_5 - - - - 0.0000000000000000000000000000003011 133.0
BYD3_k127_4174867_6 Belongs to the UPF0337 (CsbD) family - - - 0.000002063 53.0
BYD3_k127_4174867_7 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 - 2.7.7.6 0.0003267 46.0
BYD3_k127_4189062_0 PFAM ATP dependent DNA ligase domain protein K10747 - 6.5.1.1,6.5.1.6,6.5.1.7 1.543e-195 623.0
BYD3_k127_4189062_1 TonB dependent receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002427 500.0
BYD3_k127_4189062_2 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 0.00000000000000000000000000000000000000000000002482 190.0
BYD3_k127_4190334_0 nucleic acid phosphodiester bond hydrolysis K07577 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001928 430.0
BYD3_k127_4190334_1 SMART Elongator protein 3 MiaB NifB - - - 0.0000000000000000000000000000000000000000000000000000001414 201.0
BYD3_k127_4190334_2 von Willebrand factor, type A - - - 0.00000000000000000000000000000000000009896 158.0
BYD3_k127_4190334_3 COG COG3187 Heat shock protein - - - 0.000000000000000000195 98.0
BYD3_k127_4241822_0 Glycosyl hydrolase family 9 K01179 - 3.2.1.4 1.741e-241 772.0
BYD3_k127_4241822_1 Phosphotransferase enzyme family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001535 330.0
BYD3_k127_4241822_2 Glycosyl hydrolase family 9 K01179 - 3.2.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000002031 270.0
BYD3_k127_4241822_3 COG0526 Thiol-disulfide isomerase and thioredoxins - - - 0.0000000000000000000000004857 120.0
BYD3_k127_4241822_4 very-long-chain-acyl-CoA dehydrogenase activity - - - 0.0000000000000000002697 92.0
BYD3_k127_4241822_5 Fungalysin metallopeptidase (M36) - - - 0.000955 49.0
BYD3_k127_4295425_0 pfkB family carbohydrate kinase K18478 - 2.7.1.184 0.0000000000000000000000000000000000000000000000000000000001727 216.0
BYD3_k127_4295425_1 HD domain - - - 0.00000000000000000000000008609 120.0
BYD3_k127_4295425_2 diguanylate cyclase - - - 0.000000000000000000003965 106.0
BYD3_k127_4295425_3 von Willebrand factor, type A - - - 0.0000000000000007126 89.0
BYD3_k127_4295425_4 - K05826 - - 0.00002848 49.0
BYD3_k127_4304574_0 elongator protein 3 miab nifb - - - 2.484e-244 767.0
BYD3_k127_4304574_1 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K03438,K13292 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0008961,GO:0009249,GO:0009987,GO:0010467,GO:0016020,GO:0016021,GO:0016740,GO:0016757,GO:0018065,GO:0018193,GO:0018205,GO:0019538,GO:0031224,GO:0031226,GO:0036211,GO:0040007,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044425,GO:0044459,GO:0044464,GO:0051604,GO:0071704,GO:0071944,GO:0140096,GO:1901564 2.1.1.199 0.000000000000000000000000000000000000000000000000000000000000000002384 237.0
BYD3_k127_4304574_2 Protein of unknown function DUF58 - - - 0.0000000000000000000000000000000000000007926 156.0
BYD3_k127_4304574_3 Tetratricopeptide repeat - - - 0.0000000000000000000000000000003412 134.0
BYD3_k127_4304574_4 Domain of unknown function (DUF1287) K09974 - - 0.00000000000000000000002295 100.0
BYD3_k127_4314902_0 PFAM Cytochrome c assembly protein - - - 0.0000000000000000000000000000000000000000000000004446 195.0
BYD3_k127_4314902_1 FR47-like protein K18816 - 2.3.1.82 0.0000000000000000000000000000000000001204 146.0
BYD3_k127_4314902_2 ResB protein required for cytochrome c K07399 - - 0.00000000000002943 83.0
BYD3_k127_4332478_0 Evidence 4 Homologs of previously reported genes of - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001685 344.0
BYD3_k127_4332478_1 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K02535 - 3.5.1.108 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003633 275.0
BYD3_k127_4332478_2 - - - - 0.00000000000000000000000000000000000000000006024 166.0
BYD3_k127_4332478_3 EVE domain - - - 0.0000000000000000000000000000000000000002121 155.0
BYD3_k127_4332478_4 Metallo-peptidase family M12B Reprolysin-like - - - 0.000000000000000000000007529 113.0
BYD3_k127_4332478_5 - - - - 0.00000002555 59.0
BYD3_k127_4344161_0 Carboxypeptidase regulatory-like domain - - - 1.24e-298 953.0
BYD3_k127_4344161_1 Belongs to the glycosyl hydrolase 31 family - - - 3.356e-275 869.0
BYD3_k127_4344161_10 MFS-type transporter K08219 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0007293 49.0
BYD3_k127_4344161_2 hydrolase, family 3 K05349 - 3.2.1.21 1.938e-256 832.0
BYD3_k127_4344161_3 sulfatase - - - 3.568e-202 644.0
BYD3_k127_4344161_4 Part of the ABC transporter complex XylFGH involved in xylose import. Responsible for energy coupling to the transport system K10441,K10545 - 3.6.3.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004293 586.0
BYD3_k127_4344161_5 PFAM periplasmic binding protein LacI transcriptional regulator K02529 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003046 372.0
BYD3_k127_4344161_6 carbohydrate transport K10544 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003436 368.0
BYD3_k127_4344161_7 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K18979 - 1.17.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005644 317.0
BYD3_k127_4344161_8 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 GO:0005575,GO:0005618,GO:0005623,GO:0030312,GO:0044464,GO:0071944 4.1.99.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002147 293.0
BYD3_k127_4344161_9 Endonuclease Exonuclease Phosphatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001323 273.0
BYD3_k127_4405797_0 histidine kinase A domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002838 637.0
BYD3_k127_4405797_1 Heat shock 70 kDa protein K04043 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005606 346.0
BYD3_k127_4405797_2 NHL repeat containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000009097 241.0
BYD3_k127_4405797_3 Belongs to the glycosyl hydrolase 32 family K00692 - 2.4.1.10 0.0000000000000000000000000000000000000000000000000000000000002897 239.0
BYD3_k127_4405797_4 Metallophosphoesterase K07098 - - 0.00000000000000000000000000000000000000000000000000000577 200.0
BYD3_k127_4405797_5 Carboxypeptidase regulatory-like domain - - - 0.0000000000000000000000000000000000000000000000000001384 213.0
BYD3_k127_4405797_6 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K08744 - 2.7.8.41 0.0000000000000000000000000000000717 133.0
BYD3_k127_4473759_0 Conserved hypothetical ATP binding protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001252 364.0
BYD3_k127_4473759_1 Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S- adenosylmethionine. Has broad substrate specificity with 6- aminopurine nucleosides as preferred substrates K00772 - 2.4.2.28 0.0000000000000000000000000000000000000000000000000000000000007723 212.0
BYD3_k127_4473759_2 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000005909 217.0
BYD3_k127_4473759_3 peptidyl-prolyl isomerase K03769,K07533 - 5.2.1.8 0.000000000000007411 87.0
BYD3_k127_4473759_4 - - - - 0.0000000000001181 77.0
BYD3_k127_4505686_0 proline dipeptidase activity K01262 - 3.4.11.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002239 388.0
BYD3_k127_4505686_1 Predicted integral membrane protein (DUF2270) - - - 0.000000000000000000000000000000000000000000000000000000000000004237 228.0
BYD3_k127_4505686_2 Inositol monophosphatase family K01092 - 3.1.3.25 0.00000000000000000000000000000000000000000000000004421 185.0
BYD3_k127_4505686_3 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K11991 GO:0002097,GO:0002100,GO:0006139,GO:0006382,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016553,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 3.5.4.33 0.00000000000000000000000000000000000000000000001904 176.0
BYD3_k127_4505686_4 esterase - - - 0.0000000000000000000000000000000000000000001315 173.0
BYD3_k127_4505686_5 - - - - 0.00000000000000000000000000000000000003875 148.0
BYD3_k127_4505686_6 Transcription factor zinc-finger K09981 - - 0.0000000007506 65.0
BYD3_k127_4534806_0 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.00000000000000000000000000000000000000000000000000000000000000000007284 239.0
BYD3_k127_4534806_1 Carboxypeptidase regulatory-like domain - - - 0.00000000000000000000000000000000000000000000000000000005994 216.0
BYD3_k127_4534806_2 DNA-templated transcription, initiation K03088 - - 0.000000000000000000000002799 114.0
BYD3_k127_4534806_3 ABC transporter, transmembrane K18890 - - 0.000000000000000002048 86.0
BYD3_k127_4557281_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 5.764e-318 983.0
BYD3_k127_4557281_1 amino acid K03294 - - 8.782e-206 660.0
BYD3_k127_4557281_2 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000001464 265.0
BYD3_k127_4557281_3 Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway K08967 - 1.13.11.53,1.13.11.54 0.0000000000000000000000000000000000000000000000000000000000000000001592 234.0
BYD3_k127_4557281_4 Bifunctional enzyme that catalyzes the enolization of 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P) into the intermediate 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate (HK-MTPenyl-1-P), which is then dephosphorylated to form the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK- MTPene) K09880 - 3.1.3.77 0.00000000000000000000000000000000000000000000000000000000000001261 222.0
BYD3_k127_4557281_5 Catalyzes the dehydration of methylthioribulose-1- phosphate (MTRu-1-P) into 2,3-diketo-5-methylthiopentyl-1- phosphate (DK-MTP-1-P) K08964 - 4.2.1.109 0.000000000000000000000000000000000000000000000000000000008135 205.0
BYD3_k127_4557281_6 Uncharacterized protein family UPF0016 - - - 0.00000000000000000000004912 100.0
BYD3_k127_4566918_0 Mur ligase family, glutamate ligase domain K03802 - 6.3.2.29,6.3.2.30 7.121e-319 999.0
BYD3_k127_4566918_1 copper-translocating P-type ATPase K17686 - 3.6.3.54 1.499e-265 840.0
BYD3_k127_4566918_10 B12 binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002225 323.0
BYD3_k127_4566918_11 Belongs to the peptidase S51 family K13282 - 3.4.15.6 0.0000000000000000000000000000000000000000000000000000000000000000002955 238.0
BYD3_k127_4566918_12 Truncated hemoglobins K06886 - - 0.0000000000000000000000000000000000000000000000000000000000000001081 228.0
BYD3_k127_4566918_13 dextransucrase activity - - - 0.00000000000000000000000000000000000000000000000000000000000005381 239.0
BYD3_k127_4566918_14 Mycothiol maleylpyruvate isomerase N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000004123 209.0
BYD3_k127_4566918_15 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000000000000000000000000000000000000003599 183.0
BYD3_k127_4566918_16 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 - 2.7.1.148 0.000000000000000000000000000000000000000000000001209 185.0
BYD3_k127_4566918_17 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 - 3.1.1.29 0.000000000000000000000000000000000000000000000003333 179.0
BYD3_k127_4566918_18 binds to the 23S rRNA K02939 - - 0.0000000000000000000000000000000000000625 149.0
BYD3_k127_4566918_19 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000000000000000000000000302 145.0
BYD3_k127_4566918_2 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001088 499.0
BYD3_k127_4566918_20 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 - - 0.0000000000000000000000000000000007312 138.0
BYD3_k127_4566918_21 Binds together with S18 to 16S ribosomal RNA K02990 - - 0.000000000000000000000001101 108.0
BYD3_k127_4566918_22 Cysteine-rich secretory protein family - - - 0.00000000000000000000006807 105.0
BYD3_k127_4566918_23 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000002826 81.0
BYD3_k127_4566918_25 Blue copper protein - - - 0.0002189 54.0
BYD3_k127_4566918_3 Participates in initiation and elongation during chromosome replication K02314 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003458 430.0
BYD3_k127_4566918_4 Domain of unknown function (DUF5009) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003399 395.0
BYD3_k127_4566918_5 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001458 386.0
BYD3_k127_4566918_6 Domain of unknown function (DUF4139) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007745 391.0
BYD3_k127_4566918_7 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009878 387.0
BYD3_k127_4566918_8 asparaginase K13051 - 3.4.19.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003849 351.0
BYD3_k127_4566918_9 copper resistance - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002004 362.0
BYD3_k127_4691179_0 Penicillin-binding protein, dimerisation domain K03587 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005112 372.0
BYD3_k127_4691179_1 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 - 2.1.1.199 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002107 288.0
BYD3_k127_4691179_2 ZIP Zinc transporter K07238,K16267 - - 0.0000000000000000000000000000000000000000000000000000001149 204.0
BYD3_k127_4691179_3 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.0000000000000000000000000000000000000000000000001555 188.0
BYD3_k127_4691179_4 Belongs to the phosphatidylserine decarboxylase family. PSD-A subfamily K01613 - 4.1.1.65 0.000000000000000000000000000000000000000000000009209 179.0
BYD3_k127_4691179_5 Lipid A core-O-antigen ligase-like enyme K18814 - - 0.00000000000000000003923 98.0
BYD3_k127_4691179_6 - - - - 0.0000000000000000001616 89.0
BYD3_k127_4861230_0 PFAM NAD-dependent epimerase dehydratase K08678 - 4.1.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001595 496.0
BYD3_k127_4861230_1 PFAM NAD-dependent epimerase dehydratase K01784 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002121 378.0
BYD3_k127_4861230_2 Dipeptidyl peptidase IV (DPP IV) N-terminal region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001626 328.0
BYD3_k127_4890032_0 Insulinase (Peptidase family M16) K07263 - - 0.0 1348.0
BYD3_k127_4890032_1 Male sterility protein K01897 - 6.2.1.3 0.0 1246.0
BYD3_k127_4890032_2 Domain of unknown function (DUF2088) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002701 570.0
BYD3_k127_4890032_3 Glycosyl hydrolase family 47 K01230 - 3.2.1.113 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009138 478.0
BYD3_k127_4890032_4 ubiE/COQ5 methyltransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002382 327.0
BYD3_k127_4890032_5 Pfam:N_methyl_2 - - - 0.0004857 43.0
BYD3_k127_4945686_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002158 556.0
BYD3_k127_4945686_1 Catalyzes the attachment of glycine to tRNA(Gly) K01880 GO:0003674,GO:0003824,GO:0004812,GO:0004820,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006426,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0046983,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001464 362.0
BYD3_k127_4945686_10 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.0002636 51.0
BYD3_k127_4945686_2 tRNA nucleotidyltransferase poly(A) polymerase K00974 - 2.7.7.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002045 366.0
BYD3_k127_4945686_3 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001087 368.0
BYD3_k127_4945686_4 bacterial-type flagellum-dependent cell motility - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002177 289.0
BYD3_k127_4945686_5 response regulator - - - 0.0000000000000000000000000000000000000000000000000000000001258 210.0
BYD3_k127_4945686_6 - - - - 0.000000000000000000000000000000002815 132.0
BYD3_k127_4945686_7 - - - - 0.0000000000000000000000000001797 123.0
BYD3_k127_4945686_8 RNA polymerase II activating transcription factor binding - - - 0.00000000000008476 85.0
BYD3_k127_4945686_9 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.00000000005091 72.0
BYD3_k127_4964425_0 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 GO:0000105,GO:0003674,GO:0003824,GO:0004399,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0052803,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000177 513.0
BYD3_k127_4964425_1 belongs to the imidazoleglycerol-phosphate dehydratase family K01089,K01693 GO:0000105,GO:0003674,GO:0003824,GO:0004424,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 3.1.3.15,4.2.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008222 470.0
BYD3_k127_4964425_2 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008477 382.0
BYD3_k127_4964425_3 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 GO:0000107,GO:0003674,GO:0003824,GO:0016740,GO:0016757,GO:0016763 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003556 316.0
BYD3_k127_4964425_4 1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase K01814 GO:0000105,GO:0000162,GO:0003674,GO:0003824,GO:0003949,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006547,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000006609 254.0
BYD3_k127_4964425_5 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000573 246.0
BYD3_k127_4964425_6 ATP phosphoribosyltransferase K00765 GO:0000105,GO:0003674,GO:0003824,GO:0003879,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.17 0.000000000000000000000000000000000000000000000000000000000006505 210.0
BYD3_k127_4964425_7 Histidine biosynthesis bifunctional protein hisIE K11755 - 3.5.4.19,3.6.1.31 0.00000000000000000000000000000000000000000000000000000000002752 209.0
BYD3_k127_4978486_0 ADP binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004781 480.0
BYD3_k127_4978486_1 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710 - 4.2.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002626 422.0
BYD3_k127_4978486_10 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 - 1.1.1.133 0.0001278 45.0
BYD3_k127_4978486_2 MgtE intracellular N domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001867 367.0
BYD3_k127_4978486_3 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002666 332.0
BYD3_k127_4978486_4 Involved in the tonB-independent uptake of proteins K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000001478 271.0
BYD3_k127_4978486_5 DinB family - - - 0.000000000000000000000000000000000000000000000000002985 186.0
BYD3_k127_4978486_6 Transglycosylase SLT domain - - - 0.0000000000000000000000000000000000000006692 159.0
BYD3_k127_4978486_7 peroxiredoxin activity - - - 0.000000000000000000000000000000000007446 143.0
BYD3_k127_4978486_8 cell redox homeostasis - - - 0.000000000000000000002607 100.0
BYD3_k127_4978486_9 Bacterial PH domain - - - 0.0000001992 60.0
BYD3_k127_4981868_0 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 - 4.2.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006484 595.0
BYD3_k127_4981868_1 nitrite transmembrane transporter activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001009 391.0
BYD3_k127_4981868_2 4Fe-4S dicluster domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000002963 240.0
BYD3_k127_4981868_3 helix_turn_helix, cAMP Regulatory protein K10914 - - 0.0000000000000000000000000000000000000000000000000000257 195.0
BYD3_k127_4981868_4 oxidoreductase activity, acting on diphenols and related substances as donors - - - 0.0000000000000000000000000000001939 130.0
BYD3_k127_4981868_6 Molydopterin dinucleotide binding domain K00372 - - 0.0000000000000000004398 88.0
BYD3_k127_5000735_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001264 357.0
BYD3_k127_5000735_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016020,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0030964,GO:0032991,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0044425,GO:0044459,GO:0044464,GO:0045271,GO:0045272,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0070469,GO:0070470,GO:0071704,GO:0071944,GO:0072521,GO:0098796,GO:0098797,GO:0098803,GO:1901135,GO:1901360,GO:1901564,GO:1902494,GO:1990204 1.6.5.3 0.000000000000000000000000000000002354 131.0
BYD3_k127_5000735_2 plastoquinone oxidoreductase chain 6 K00339 - 1.6.5.3 0.0000000000000000000000000003614 121.0
BYD3_k127_5000735_3 FR47-like protein - - - 0.000000000000000000000005582 107.0
BYD3_k127_5000735_4 PPIC-type PPIASE domain K03771 - 5.2.1.8 0.0000000000000001225 93.0
BYD3_k127_500740_0 Spermine/spermidine synthase domain K00797 - 2.5.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009128 591.0
BYD3_k127_500740_1 NAD(P)-binding Rossmann-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004483 485.0
BYD3_k127_500740_10 S-adenosylmethionine decarboxylase K01611 - 4.1.1.50 0.00000000000000000000000000000009827 129.0
BYD3_k127_500740_11 Acetyltransferase (GNAT) domain K03790 - 2.3.1.128 0.0000000000000000000004104 102.0
BYD3_k127_500740_12 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 - 0.000000000000000006258 85.0
BYD3_k127_500740_13 Domain of Unknown Function (DUF350) - - - 0.00000000005386 65.0
BYD3_k127_500740_14 mttA/Hcf106 family K03116,K03117 - - 0.0000000002743 66.0
BYD3_k127_500740_2 Peptidase M56 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001005 430.0
BYD3_k127_500740_3 Domain of unknown function (DUF4178) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002275 430.0
BYD3_k127_500740_4 AIR synthase related protein, C-terminal domain K01008 - 2.7.9.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006602 338.0
BYD3_k127_500740_5 Cellulose biosynthesis protein BcsQ K03496 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001419 304.0
BYD3_k127_500740_6 Belongs to the ParB family K03497 - - 0.000000000000000000000000000000000000000000000000000000000000000000004289 244.0
BYD3_k127_500740_7 PD-(D/E)XK nuclease superfamily - - - 0.0000000000000000000000000000000000000001378 154.0
BYD3_k127_500740_8 amine dehydrogenase activity - - - 0.0000000000000000000000000000000000000002177 162.0
BYD3_k127_500740_9 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes K03118 GO:0003674,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009977,GO:0015031,GO:0015291,GO:0015399,GO:0015405,GO:0015450,GO:0015833,GO:0016020,GO:0022804,GO:0022857,GO:0022884,GO:0032991,GO:0033036,GO:0033281,GO:0034613,GO:0040007,GO:0042886,GO:0042887,GO:0043953,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0046907,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0065002,GO:0070727,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0098796,GO:0098797,GO:1904680 - 0.0000000000000000000000000000000005634 144.0
BYD3_k127_5035953_0 Beta propeller domain - - - 2.831e-202 648.0
BYD3_k127_5035953_1 PFAM peptidase M19 renal dipeptidase K01273 - 3.4.13.19 0.000000000000000000006835 94.0
BYD3_k127_509157_0 PFAM alpha-2-macroglobulin domain protein K06894 - - 0.0 1302.0
BYD3_k127_509157_1 - - - - 0.00000000000003868 82.0
BYD3_k127_509157_2 Phage shock protein A K03969 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000004802 60.0
BYD3_k127_5109713_0 peptidase K01415,K07386 - 3.4.24.71 1.615e-195 632.0
BYD3_k127_5109713_1 COG1078 HD superfamily phosphohydrolases K06885 GO:0003674,GO:0003824,GO:0006139,GO:0006163,GO:0006195,GO:0006203,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008832,GO:0009056,GO:0009058,GO:0009117,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009151,GO:0009155,GO:0009166,GO:0009200,GO:0009204,GO:0009215,GO:0009217,GO:0009262,GO:0009264,GO:0009394,GO:0009987,GO:0016787,GO:0016788,GO:0016793,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042578,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046070,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001575 307.0
BYD3_k127_5109713_2 Carboxypeptidase regulatory-like domain - - - 0.00000000000000000000000000000000000000000000000000000002939 216.0
BYD3_k127_5109713_3 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 - 2.7.7.6 0.0000000000000000000000000000000000000000000000000004191 190.0
BYD3_k127_5109713_4 Acyl-transferase K00655 - 2.3.1.51 0.00000000000000000000000000000000000000000000000004947 187.0
BYD3_k127_5109713_5 Belongs to the glycosyl hydrolase 32 family K00692 - 2.4.1.10 0.000000000000000000000000000000000000001004 164.0
BYD3_k127_5109713_6 CHRD domain - - - 0.000000000001454 80.0
BYD3_k127_5109713_7 Glycosyl transferase family 41 - - - 0.0000003555 62.0
BYD3_k127_5109713_8 Gram-negative bacterial TonB protein C-terminal K03832 - - 0.00001905 55.0
BYD3_k127_5154047_0 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 - 2.5.1.75 0.0000000000000000000000000000000000000000000000000000000000000000000000418 251.0
BYD3_k127_5154047_1 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 - 2.7.4.9 0.00000000000000000000000000000000000000000000000001158 190.0
BYD3_k127_5154047_2 TIGRFAM DNA polymerase III, delta prime subunit K02341 - 2.7.7.7 0.000000000000000000000000000000000000000000003262 177.0
BYD3_k127_5154047_3 RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs K03666 - - 0.0000000000000000118 84.0
BYD3_k127_5154047_4 Protein of unknown function (DUF2752) - - - 0.000000000000004493 79.0
BYD3_k127_5154047_5 TIGRFAM TonB K03832 - - 0.000000005303 68.0
BYD3_k127_5212433_0 PFAM ABC transporter related K15738 - - 1.024e-204 655.0
BYD3_k127_5212433_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009675 323.0
BYD3_k127_5212433_2 membrane protein (DUF2306) - - - 0.0000000000000000000000000000000000000000000000000000000000000001129 229.0
BYD3_k127_5212433_3 protein kinase activity - - - 0.0000000000000000000000000000000000000000000000000218 190.0
BYD3_k127_5212433_4 X-Pro dipeptidyl-peptidase (S15 family) - - - 0.0000000000000000000000000000000000000000000000236 172.0
BYD3_k127_5212433_5 ABC transporter, ATP-binding protein K15738 - - 0.00003666 47.0
BYD3_k127_5214958_0 Tetratricopeptide repeats K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001761 399.0
BYD3_k127_5214958_1 glutaredoxin-like protein, YruB-family - - - 0.000000004155 62.0
BYD3_k127_5218465_0 AMP-binding enzyme K01897 - 6.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006886 462.0
BYD3_k127_5218465_1 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003151 407.0
BYD3_k127_5218465_2 Amidohydrolase family K01466 - 3.5.2.5 0.00000000000000000000000000000000000000000000000000000000000000000000006334 246.0
BYD3_k127_5218465_3 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000182 97.0
BYD3_k127_5218465_4 - - - - 0.0000000000179 68.0
BYD3_k127_5218465_5 Two component, sigma54 specific, transcriptional regulator, Fis family K02481,K07712 - - 0.0002533 49.0
BYD3_k127_5234747_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006245 374.0
BYD3_k127_5234747_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002239 353.0
BYD3_k127_5234747_10 helix_turn_helix, arabinose operon control protein - - - 0.0000000000000000000000000000000000000000000000000008251 193.0
BYD3_k127_5234747_11 Protein of unknown function (DUF1761) - - - 0.0000000000000000000000000000000000000000000000001771 180.0
BYD3_k127_5234747_12 integral membrane protein - - - 0.000000000000000000000000000000000000000000000002516 177.0
BYD3_k127_5234747_13 TIGRFAM sugar-phosphate isomerase, RpiB LacA LacB family K01808 - 5.3.1.6 0.0000000000000000000000000000000000000000000003014 170.0
BYD3_k127_5234747_14 Zn-finger in ubiquitin-hydrolases and other protein - - - 0.000000000000000000000000000000000000003549 147.0
BYD3_k127_5234747_15 - - - - 0.00000000000000000000002287 109.0
BYD3_k127_5234747_16 Pfam:N_methyl_2 - - - 0.00000005169 63.0
BYD3_k127_5234747_17 Lipopolysaccharide-induced tumor necrosis factor-alpha factor homolog K19363 - - 0.0001375 50.0
BYD3_k127_5234747_2 Pfam Zn-finger in ubiquitin-hydrolases and other protein K03455,K08715 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001428 325.0
BYD3_k127_5234747_3 Transposase is116 is110 is902 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002542 306.0
BYD3_k127_5234747_4 AIR carboxylase K06898 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001108 279.0
BYD3_k127_5234747_5 Protein of unknown function (DUF2911) - - - 0.000000000000000000000000000000000000000000000000000000000000004357 226.0
BYD3_k127_5234747_6 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K04750 - - 0.0000000000000000000000000000000000000000000000000000000001165 207.0
BYD3_k127_5234747_7 Domain of unknown function (DUF4287) - - - 0.0000000000000000000000000000000000000000000000000000000006727 207.0
BYD3_k127_5234747_8 Trypsin-like peptidase domain - - - 0.0000000000000000000000000000000000000000000000000000003516 214.0
BYD3_k127_5234747_9 TIGRFAM TIGR02453 family protein - - - 0.00000000000000000000000000000000000000000000000000001309 199.0
BYD3_k127_5256223_0 PFAM D-aminoacylase, C-terminal region K06015 - 3.5.1.81 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003237 583.0
BYD3_k127_5256223_1 Ammonium Transporter K03320 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001605 560.0
BYD3_k127_5256223_10 - - - - 0.0007303 48.0
BYD3_k127_5256223_2 PFAM sigma-54 factor interaction domain-containing protein K02584 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008175 527.0
BYD3_k127_5256223_3 Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell K00982 GO:0000166,GO:0000287,GO:0000820,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006521,GO:0006541,GO:0006542,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0008882,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0010565,GO:0016053,GO:0016740,GO:0016772,GO:0016779,GO:0017076,GO:0019222,GO:0019752,GO:0030554,GO:0031323,GO:0032553,GO:0032555,GO:0032559,GO:0033238,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046872,GO:0050789,GO:0050794,GO:0051171,GO:0062012,GO:0065007,GO:0070566,GO:0071704,GO:0080090,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.7.42,2.7.7.89 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009391 327.0
BYD3_k127_5256223_4 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.00000000000000000000000000000000000000000000000000000000002576 218.0
BYD3_k127_5256223_5 endonuclease I - - - 0.00000000000000000000000000000000000000000000000000000001771 209.0
BYD3_k127_5256223_6 - - - - 0.0000000000000000000000000000000000000000000000001274 188.0
BYD3_k127_5256223_7 cheY-homologous receiver domain - - - 0.0000000000000000002261 93.0
BYD3_k127_5256223_8 von Willebrand factor, type A K07114 - - 0.00000000000000007837 93.0
BYD3_k127_5256223_9 Protein of unknown function, DUF255 - - - 0.0000000000000002806 89.0
BYD3_k127_5267777_0 Hydrolase - - - 0.0 1189.0
BYD3_k127_5267777_1 Stage II sporulation D domain protein K06381 - - 0.0000000000006473 69.0
BYD3_k127_5267777_2 Pfam Polyketide cyclase dehydrase and lipid transport - - - 0.000000000006471 72.0
BYD3_k127_5267777_4 - - - - 0.00005266 55.0
BYD3_k127_5330824_0 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009787 370.0
BYD3_k127_5330824_1 Transaldolase/Fructose-6-phosphate aldolase K00616 - 2.2.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001584 299.0
BYD3_k127_5330824_2 PFAM fumarylacetoacetate (FAA) hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001389 245.0
BYD3_k127_5330824_3 Universal stress protein family - - - 0.0000000000000000000000306 104.0
BYD3_k127_5330824_4 Iron dependent repressor, N-terminal DNA binding domain - - - 0.00000000000000002399 87.0
BYD3_k127_5330824_5 Belongs to the UPF0374 family K07586 - - 0.000000000000005219 82.0
BYD3_k127_5330824_6 - - - - 0.0000000000000166 78.0
BYD3_k127_5330824_7 cellulase activity - - - 0.00000009468 64.0
BYD3_k127_5330824_8 PFAM NLP P60 protein K11060,K21471 - - 0.0003521 45.0
BYD3_k127_5330824_9 Forkhead associated domain - - - 0.000946 51.0
BYD3_k127_5371353_0 GDSL-like Lipase/Acylhydrolase family - - - 0.000000000000000000000000000000000000000000001067 174.0
BYD3_k127_5371353_1 - - - - 0.00000000000000000000000000507 126.0
BYD3_k127_5371353_2 response regulator, receiver - - - 0.000000000004866 66.0
BYD3_k127_5373651_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009151 494.0
BYD3_k127_5373651_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006971 488.0
BYD3_k127_5373651_2 PFAM NADH ubiquinone oxidoreductase, subunit G, iron-sulphur binding K00336 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001861 427.0
BYD3_k127_5373651_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000001524 244.0
BYD3_k127_5373651_4 2 iron, 2 sulfur cluster binding K00334,K00335 - 1.6.5.3 0.0000000000000000000000000000000000000000000000766 176.0
BYD3_k127_5373651_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 GO:0003674,GO:0003824,GO:0003954,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564 1.6.5.3 0.0000000000000000000000000000000000000000006934 161.0
BYD3_k127_5373651_6 Signal peptidase, peptidase S26 K03100 - 3.4.21.89 0.00000000000000000004365 97.0
BYD3_k127_5373651_7 30S ribosomal protein Thx K19033 - - 0.00001663 48.0
BYD3_k127_5385700_0 lipopolysaccharide transport K22110 - - 0.0 1319.0
BYD3_k127_5385700_1 membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006922 340.0
BYD3_k127_5385700_2 PFAM binding-protein-dependent transport systems inner membrane component K02034 - - 0.000000000000000000000000000000000000000000000000000000000000000000387 241.0
BYD3_k127_5385700_3 Binding-protein-dependent transport system inner membrane component K02033 - - 0.00000000000000000000000001316 115.0
BYD3_k127_5385700_4 - - - - 0.0000000000000002347 88.0
BYD3_k127_5424153_0 PFAM Zinc carboxypeptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003208 479.0
BYD3_k127_5424153_1 Protein kinase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000008586 151.0
BYD3_k127_5425204_0 G-rich domain on putative tyrosine kinase K16554 - - 0.000000000000000000000000000000000000000000000000000000000000000000001408 265.0
BYD3_k127_5425204_1 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 - 1.1.1.133 0.00000000000000000000000000000000000000000000000000001182 199.0
BYD3_k127_5425204_2 Pyridine nucleotide-disulphide oxidoreductase - - - 0.0000000000000000000007469 106.0
BYD3_k127_5531746_0 TROVE domain - - - 1.202e-207 657.0
BYD3_k127_5531746_1 Prolyl oligopeptidase - - - 5.671e-206 655.0
BYD3_k127_5531746_2 family UPF0027 K14415 - 6.5.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000978 504.0
BYD3_k127_5531746_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002011 265.0
BYD3_k127_5531746_4 NADPH-dependent FMN reductase - - - 0.000000000000000000000000000000000000000000000000000000000000008129 221.0
BYD3_k127_5531746_5 DinB family - - - 0.000000000000000000000000000000000000000000000000174 181.0
BYD3_k127_5531746_6 - - - - 0.000000000000000000000000000000000000009025 151.0
BYD3_k127_5531746_7 lactoylglutathione lyase activity - - - 0.00000000000000000000000000005242 120.0
BYD3_k127_5531746_8 Dienelactone hydrolase family K01061 - 3.1.1.45 0.0000000000000000000000000008178 123.0
BYD3_k127_5531746_9 SnoaL-like domain - - - 0.000000000005413 72.0
BYD3_k127_5534045_0 Leucyl-tRNA synthetase, Domain 2 K01869 - 6.1.1.4 5.529e-231 734.0
BYD3_k127_5534045_1 Sulfatase maturase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009941 525.0
BYD3_k127_5534045_2 Histidine-specific methyltransferase, SAM-dependent - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002756 280.0
BYD3_k127_5534045_3 Catalyzes the hydroxylation of the N(6)-(4-aminobutyl)- L-lysine intermediate to form hypusine, an essential post- translational modification only found in mature eIF-5A factor K06072 GO:0003674,GO:0003824,GO:0004497,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0008612,GO:0009058,GO:0009987,GO:0010467,GO:0016491,GO:0016705,GO:0018193,GO:0018205,GO:0019135,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0051604,GO:0055114,GO:0071704,GO:1901564 1.14.99.29 0.000000000000002222 87.0
BYD3_k127_5535746_0 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate K01681 - 4.2.1.3 0.0 1254.0
BYD3_k127_5535746_1 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 - - 0.00000000000000000000000000000000000000000000000000004202 191.0
BYD3_k127_5535746_2 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K01802,K03767,K03768 - 5.2.1.8 0.000000000000000000000000000000000000000000001147 169.0
BYD3_k127_5535746_3 Peptidase family C25 - - - 0.00000000000000000000000000000000000000002915 175.0
BYD3_k127_5535746_4 spheroidene biosynthetic process K09844 GO:0003674,GO:0003824,GO:0006629,GO:0006720,GO:0006721,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016108,GO:0016109,GO:0016114,GO:0016116,GO:0016117,GO:0016122,GO:0016123,GO:0016829,GO:0016835,GO:0016836,GO:0018904,GO:0042440,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046148,GO:0071704,GO:1901178,GO:1901180,GO:1901503,GO:1901576 4.2.1.131 0.00000000000000000000000000000000001364 149.0
BYD3_k127_5535746_5 Putative heavy-metal-binding - - - 0.00000000000000000000000000000000002697 138.0
BYD3_k127_5535746_6 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K01802,K03768,K09565 - 5.2.1.8 0.00000000000000000000000000000009414 132.0
BYD3_k127_5535746_7 Sucrose-6F-phosphate phosphohydrolase - - - 0.000000005667 58.0
BYD3_k127_5535746_8 - - - - 0.0002876 48.0
BYD3_k127_5562916_0 PFAM 2Fe-2S -binding K13481 - 1.17.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001853 460.0
BYD3_k127_5562916_1 aldehyde oxidase and xanthine dehydrogenase a b hammerhead K13482 - 1.17.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006604 387.0
BYD3_k127_5562916_2 Glutamine cyclotransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000008448 260.0
BYD3_k127_5562916_3 MafB19-like deaminase K01487 - 3.5.4.3 0.0000000000000000000000000000000000000000000000000000000000007477 213.0
BYD3_k127_5562916_4 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process - - - 0.000000000000000000000000000000000000000000001162 182.0
BYD3_k127_5562916_5 Putative inner membrane exporter, YdcZ K09936 - - 0.00000000000000000000000000000000004125 138.0
BYD3_k127_5562916_6 DNA internalization-related competence protein ComEC Rec2 K02238 - - 0.0000000000000000000006737 110.0
BYD3_k127_5562916_7 TIGRFAM competence protein ComEA helix-hairpin-helix K02237 - - 0.00000000000001479 78.0
BYD3_k127_5562916_8 - - - - 0.00000000000002277 80.0
BYD3_k127_5588124_0 DEAD DEAH box helicase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003896 262.0
BYD3_k127_5588124_1 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0002790,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006457,GO:0006605,GO:0006810,GO:0006886,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0009306,GO:0009987,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032940,GO:0032991,GO:0033036,GO:0033220,GO:0034613,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042802,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0046903,GO:0046907,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0061077,GO:0065002,GO:0070727,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 0.00000000005845 66.0
BYD3_k127_5588355_0 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001463 463.0
BYD3_k127_5588355_1 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009071 394.0
BYD3_k127_5588355_10 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 - - 0.0000000000000000000000000000000000000000000000008805 176.0
BYD3_k127_5588355_11 Binds to the 23S rRNA K02876 - - 0.00000000000000000000000000000000000000000000001124 176.0
BYD3_k127_5588355_12 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 - - 0.0000000000000000000000000000000000000000001108 162.0
BYD3_k127_5588355_13 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 - - 0.00000000000000000000000000000000000001257 148.0
BYD3_k127_5588355_14 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015935,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042274,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.00000000000000000000000000000000008864 134.0
BYD3_k127_5588355_15 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 - - 0.00000000000000000000000000000764 121.0
BYD3_k127_5588355_16 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit K02895 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000002582 105.0
BYD3_k127_5588355_17 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 - - 0.00000000000000000000006685 107.0
BYD3_k127_5588355_18 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 - - 0.000000000000000000001055 100.0
BYD3_k127_5588355_19 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000004907 90.0
BYD3_k127_5588355_2 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001024 293.0
BYD3_k127_5588355_20 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.000000000000001798 76.0
BYD3_k127_5588355_21 Ribosomal protein L30 K02907 - - 0.0000000000001837 73.0
BYD3_k127_5588355_22 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.0000000001673 63.0
BYD3_k127_5588355_23 Belongs to the universal ribosomal protein uL29 family K02904 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0002209 47.0
BYD3_k127_5588355_3 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002054 276.0
BYD3_k127_5588355_4 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.000000000000000000000000000000000000000000000000000000000000000003703 233.0
BYD3_k127_5588355_5 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 - - 0.000000000000000000000000000000000000000000000000000000000000005021 219.0
BYD3_k127_5588355_6 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 - - 0.00000000000000000000000000000000000000000000000000000000002861 210.0
BYD3_k127_5588355_7 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 - - 0.00000000000000000000000000000000000000000000000000000000573 205.0
BYD3_k127_5588355_8 Forms part of the polypeptide exit tunnel K02926 - - 0.000000000000000000000000000000000000000000000000000001275 202.0
BYD3_k127_5588355_9 Involved in the binding of tRNA to the ribosomes K02946 - - 0.0000000000000000000000000000000000000000000000000005666 186.0
BYD3_k127_5651684_0 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008069 338.0
BYD3_k127_5651684_1 Inner membrane component of T3SS, cytoplasmic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004803 314.0
BYD3_k127_5651684_2 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001965 286.0
BYD3_k127_5651684_3 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000008725 268.0
BYD3_k127_5651684_4 histone H2A K63-linked ubiquitination - - - 0.0000000000000000000000000000000000000000000000000000000000003183 235.0
BYD3_k127_5651684_5 ECF sigma factor - - - 0.00000000000000000000000000000000000000000000000000000001482 205.0
BYD3_k127_5651684_6 - - - - 0.0000000000000000000000000000000000000000000000000005298 192.0
BYD3_k127_5651684_7 Biotin-lipoyl like K02005 - - 0.0000000000000000000000000000000000000000000000000626 197.0
BYD3_k127_5651684_8 PFAM Forkhead-associated protein - - - 0.000000000000000000003828 102.0
BYD3_k127_5651684_9 RDD family - - - 0.000000000005249 72.0
BYD3_k127_5846940_0 acyl-CoA dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004708 293.0
BYD3_k127_5846940_1 Belongs to the pseudouridine synthase RsuA family K06178,K06183 - 5.4.99.19,5.4.99.22 0.00000000000000000000000000000000000000000000000000000000003946 223.0
BYD3_k127_5846940_2 CoA binding domain K06929 - - 0.000000000000000000000000000000000000000000000000001359 186.0
BYD3_k127_5846940_3 Uncharacterized protein conserved in bacteria (DUF2237) K09966 - - 0.00000000000000000000000000000000000000000000000008126 182.0
BYD3_k127_5846940_4 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.000000000000000000000000000000000000000000000003762 182.0
BYD3_k127_5846940_5 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.0000000000000000000000000000000000000000000002676 174.0
BYD3_k127_5846940_6 DinB family - - - 0.00000000000000000000000003967 113.0
BYD3_k127_5846940_7 arsenate reductase (glutaredoxin) activity K00537 - 1.20.4.1 0.00000000000000000003323 93.0
BYD3_k127_5846940_8 Protein of unknown function (DUF779) K09959 - - 0.0000001811 53.0
BYD3_k127_5854860_0 B12 binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003073 516.0
BYD3_k127_5854860_1 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001141 401.0
BYD3_k127_5854860_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006355 303.0
BYD3_k127_5854860_3 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000000000005608 198.0
BYD3_k127_5854860_4 ECF sigma factor - - - 0.00000000000000000000000000000000000000000000000000001452 194.0
BYD3_k127_5854860_5 Belongs to the helicase family. UvrD subfamily K07465 - - 0.00000000000000000000000000004198 124.0
BYD3_k127_5854860_6 - - - - 0.00000001594 59.0
BYD3_k127_5880617_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001507 526.0
BYD3_k127_5880617_1 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007598 375.0
BYD3_k127_5880617_2 Pyridoxal phosphate biosynthetic protein PdxA K22024 - 1.1.1.408,1.1.1.409 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001904 282.0
BYD3_k127_5880617_3 cheY-homologous receiver domain - - - 0.00000000000000000000000000009608 130.0
BYD3_k127_5880617_4 Hfq protein - - - 0.000000000000000000008191 94.0
BYD3_k127_5887426_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 9.608e-296 928.0
BYD3_k127_5887426_1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000198 580.0
BYD3_k127_5887426_10 PFAM Nitroreductase family - - - 0.0000000000000000000000000000000000000000000000000003548 194.0
BYD3_k127_5887426_11 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814 - 2.4.1.129 0.0000000000000000000000000000000000000000000000000005938 194.0
BYD3_k127_5887426_12 Beta-lactamase - - - 0.00000000000000000000000000000000000000000000000003979 193.0
BYD3_k127_5887426_13 PFAM glycosyl transferase family 39 K07264 - 2.4.2.43 0.0000000000000000000000000000000000000000000000000479 196.0
BYD3_k127_5887426_14 helix_turn_helix gluconate operon transcriptional repressor K07978 - - 0.00000000000000000000000000000000000000000000006441 180.0
BYD3_k127_5887426_15 RNA polymerase sigma factor K03088 - - 0.0000000000000000000000000000000000000000000007743 173.0
BYD3_k127_5887426_16 membrane - - - 0.000000000000000000000000000000000000001558 157.0
BYD3_k127_5887426_17 - - - - 0.00000000000000000000000000000000000000224 151.0
BYD3_k127_5887426_18 TIGRFAM VWFA-related Acidobacterial domain - - - 0.0000000000000000000000000000000006939 146.0
BYD3_k127_5887426_19 bacterial-type flagellum-dependent cell motility - - - 0.00000000000000000000000000000005746 132.0
BYD3_k127_5887426_2 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000925 529.0
BYD3_k127_5887426_20 PFAM von Willebrand factor type A K07114 - - 0.00000000000000000000000000002534 132.0
BYD3_k127_5887426_21 Transglutaminase-like superfamily - - - 0.00000000000000000000000000003246 119.0
BYD3_k127_5887426_22 Transcriptional regulator - - - 0.000000000000000000000000001407 117.0
BYD3_k127_5887426_23 - - - - 0.0000000000000006927 87.0
BYD3_k127_5887426_24 - - - - 0.0000000000002 76.0
BYD3_k127_5887426_25 - - - - 0.000000002264 66.0
BYD3_k127_5887426_26 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.000002107 59.0
BYD3_k127_5887426_27 Putative zinc-finger - - - 0.0001244 53.0
BYD3_k127_5887426_3 Peptidase S46 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002615 430.0
BYD3_k127_5887426_4 COGs COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000884 382.0
BYD3_k127_5887426_5 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine K07566 - 2.7.7.87 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003542 355.0
BYD3_k127_5887426_6 Oxidoreductase family, NAD-binding Rossmann fold K09949 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002391 267.0
BYD3_k127_5887426_7 Lysin motif K08307 - - 0.00000000000000000000000000000000000000000000000000000000000005144 235.0
BYD3_k127_5887426_8 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.0000000000000000000000000000000000000000000000000000000000001226 217.0
BYD3_k127_5887426_9 Belongs to the UPF0312 family - - - 0.000000000000000000000000000000000000000000000000000001214 200.0
BYD3_k127_5891604_0 ligase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001176 390.0
BYD3_k127_5891604_1 SMART tyrosine protein kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002221 293.0
BYD3_k127_5891604_2 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000001151 158.0
BYD3_k127_5891604_3 von Willebrand factor, type A - - - 0.0000000000000000000000000004147 126.0
BYD3_k127_5891604_4 PFAM Protein kinase domain - - - 0.000000000000000000000000105 123.0
BYD3_k127_5891604_5 - - - - 0.00000000000000005579 93.0
BYD3_k127_5891604_6 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.00000002763 65.0
BYD3_k127_5891604_7 Putative zinc-finger - - - 0.00000006814 63.0
BYD3_k127_5900361_0 PFAM Alcohol dehydrogenase GroES-like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001778 569.0
BYD3_k127_5900361_1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004582 427.0
BYD3_k127_5900361_2 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K01834 - 5.4.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006794 381.0
BYD3_k127_5900361_3 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000163 338.0
BYD3_k127_5900361_4 membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003105 314.0
BYD3_k127_5900361_5 Mur ligase, middle domain K11754 - 6.3.2.12,6.3.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008288 291.0
BYD3_k127_5900361_6 TraB family K09973 - - 0.00000000000000000000000000000000000000000000000000000000296 210.0
BYD3_k127_5900361_7 Cyclase dehydrase - - - 0.00000000000000000000000000000000000000000000000000000001046 209.0
BYD3_k127_5900361_8 Protein of unknown function (DUF1572) - - - 0.00000000000000000000000000000000000000000000007997 173.0
BYD3_k127_5900361_9 PFAM inositol monophosphatase K01092 - 3.1.3.25 0.000000000000000000000000000000000005791 139.0
BYD3_k127_5919018_0 Class II Aldolase and Adducin N-terminal domain - - - 8.333e-318 987.0
BYD3_k127_5919018_1 isomerase K01820 - 5.3.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004884 607.0
BYD3_k127_5919018_2 Sialate O-acetylesterase K05970 - 3.1.1.53 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001785 602.0
BYD3_k127_5919018_3 Involved in the tonB-independent uptake of proteins K01730 - 4.2.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004247 495.0
BYD3_k127_5919018_4 Involved in the catabolism of L-rhamnose (6-deoxy-L- mannose). Catalyzes the transfer of the gamma-phosphate group from ATP to the 1-hydroxyl group of L-rhamnulose to yield L-rhamnulose 1-phosphate K00848 - 2.7.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002115 364.0
BYD3_k127_5955036_0 Peptidase family M28 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002657 275.0
BYD3_k127_5955036_1 OsmC-like protein K07397 - - 0.0000000000000000000000000000000004858 134.0
BYD3_k127_5955036_2 multi-organism process K03195 - - 0.00000000466 69.0
BYD3_k127_5955036_3 - - - - 0.0001741 52.0
BYD3_k127_59655_0 Type II/IV secretion system protein K02669 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001713 477.0
BYD3_k127_59655_1 phosphorelay sensor kinase activity K02668 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000006021 267.0
BYD3_k127_59655_2 response regulator - - - 0.0001416 44.0
BYD3_k127_59655_3 Pilus assembly protein PilO K02664 - - 0.0005507 51.0
BYD3_k127_6074189_0 von Willebrand factor, type A K07114 - - 3.326e-221 706.0
BYD3_k127_6074189_1 LVIVD repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000191 396.0
BYD3_k127_6074189_2 amine dehydrogenase activity - - - 0.000000000000000000000002494 103.0
BYD3_k127_6074189_3 - - - - 0.0000000000000000000003502 106.0
BYD3_k127_613935_0 MatE - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009732 491.0
BYD3_k127_613935_1 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002594 320.0
BYD3_k127_613935_2 Lanthionine synthetase C family protein - - - 0.00000001517 68.0
BYD3_k127_6147152_0 PepSY-associated TM region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001626 328.0
BYD3_k127_6147152_1 response regulator, receiver K07667 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002954 262.0
BYD3_k127_6147152_2 Histidine kinase K07646 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000008261 269.0
BYD3_k127_6147152_3 Major facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000006926 197.0
BYD3_k127_6147152_4 Acetyltransferase (GNAT) family - - - 0.000000000000000000000000000000000000000003397 164.0
BYD3_k127_6147152_5 Metal-dependent phosphohydrolase, HD region - - - 0.0000000000000000000000000000000001142 140.0
BYD3_k127_6147152_7 PkhD-type hydroxylase K07336 GO:0006873,GO:0006875,GO:0006879,GO:0006950,GO:0006974,GO:0008150,GO:0009987,GO:0019725,GO:0030003,GO:0033554,GO:0042592,GO:0046916,GO:0048878,GO:0050801,GO:0050896,GO:0051716,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0065007,GO:0065008,GO:0098771 - 0.00000000000000000000000007248 106.0
BYD3_k127_6147152_8 PFAM D12 class N6 adenine-specific DNA methyltransferase - - - 0.0000000109 66.0
BYD3_k127_6147152_9 homolog subfamily A member K09504 GO:0002119,GO:0002164,GO:0003674,GO:0005102,GO:0005113,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005829,GO:0006457,GO:0006996,GO:0007005,GO:0007154,GO:0007165,GO:0007166,GO:0007224,GO:0007275,GO:0008150,GO:0009790,GO:0009791,GO:0009792,GO:0009987,GO:0016043,GO:0023052,GO:0032501,GO:0032502,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464,GO:0048856,GO:0050789,GO:0050794,GO:0050896,GO:0051082,GO:0051716,GO:0065007,GO:0071840 - 0.000004171 59.0
BYD3_k127_6171713_0 DNA repair exonuclease K03547 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007829 289.0
BYD3_k127_6171713_2 SpoIVB peptidase S55 - - - 0.0000000000000000000000000000004652 130.0
BYD3_k127_6171713_3 ATP-dependent protease La (LON) substrate-binding domain K01338 - 3.4.21.53 0.0000000000000000000000000001714 123.0
BYD3_k127_6171713_4 cellulose binding - - - 0.000000000000002843 82.0
BYD3_k127_6171713_5 Alpha beta K06889 - - 0.0001992 53.0
BYD3_k127_6181257_0 Type II secretion system (T2SS), protein E, N-terminal domain K02454 - - 7.486e-218 691.0
BYD3_k127_6181257_1 Type II/IV secretion system protein K02669 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006212 560.0
BYD3_k127_6181257_2 Sodium/hydrogen exchanger family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000131 426.0
BYD3_k127_6181257_3 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.00000000000000000000000000000000000000000000000002112 187.0
BYD3_k127_6181257_4 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000006901 158.0
BYD3_k127_6181257_5 Type II secretion system (T2SS), protein F K02455 - - 0.00000000000000000000000000000000007114 138.0
BYD3_k127_6181257_6 PFAM TPR repeat-containing protein - - - 0.000000005719 67.0
BYD3_k127_6181257_7 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K07715 - - 0.00000008882 61.0
BYD3_k127_6185881_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 4.528e-236 740.0
BYD3_k127_6185881_1 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY K03106 - 3.6.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009889 474.0
BYD3_k127_6185881_10 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045260,GO:0045263,GO:0045264,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098797,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.0000005358 58.0
BYD3_k127_6185881_11 BON domain K04065 - - 0.000002715 56.0
BYD3_k127_6185881_12 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0). The b'-subunit is a diverged and duplicated form of b found in plants and photosynthetic bacteria K02109 GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0016020,GO:0016469,GO:0032991,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0045259,GO:0045260,GO:0071944,GO:0098796,GO:0098797 - 0.000006202 54.0
BYD3_k127_6185881_2 virion core protein, lumpy skin disease virus - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008325 410.0
BYD3_k127_6185881_3 Belongs to the N(4) N(6)-methyltransferase family K07319 - 2.1.1.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002187 376.0
BYD3_k127_6185881_4 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000287 280.0
BYD3_k127_6185881_5 Glycosyltransferase family 9 (heptosyltransferase) K02849 - - 0.000000000000000000000000000000000000000004905 168.0
BYD3_k127_6185881_6 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.00000000000000000000000000001618 124.0
BYD3_k127_6185881_7 VanZ like family - - - 0.0000000000000000000008442 101.0
BYD3_k127_6185881_8 Belongs to the bacterial ribosomal protein bS16 family K02959 GO:0000028,GO:0000217,GO:0000400,GO:0003674,GO:0003676,GO:0003677,GO:0003735,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006259,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0016787,GO:0016788,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0090305,GO:0097159,GO:0140097,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000004326 93.0
BYD3_k127_6185881_9 Trm112p-like protein K09791 - - 0.00000000000000003471 82.0
BYD3_k127_6198446_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009034 430.0
BYD3_k127_6198446_1 SAICAR synthetase K01923,K13713 - 6.3.2.6,6.3.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002779 351.0
BYD3_k127_6198446_2 Multicopper oxidase K22350 - 1.16.3.3 0.000000000000000000000000000000001817 142.0
BYD3_k127_6198446_3 MOSC domain protein beta barrel domain protein K07140 - - 0.00000000000000000001667 92.0
BYD3_k127_6204718_0 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005959 317.0
BYD3_k127_6204718_1 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03218 - 2.1.1.185 0.000000000000000000000000000000000000000000000000000000000000000008514 235.0
BYD3_k127_6204718_10 polysaccharide biosynthetic process - - - 0.0002329 50.0
BYD3_k127_6204718_2 COGs COG1432 conserved - - - 0.000000000000000000000000000000000000000000000000000000000005984 214.0
BYD3_k127_6204718_3 protein kinase activity - - - 0.00000000000000000000000000000000000000000000000000005311 211.0
BYD3_k127_6204718_4 Fibronectin-binding protein A N-terminus (FbpA) - - - 0.000000000000000000000000000000000000000000000002907 190.0
BYD3_k127_6204718_5 PFAM S23 ribosomal protein - - - 0.000000000000000000000000000000003685 130.0
BYD3_k127_6204718_6 Mo-molybdopterin cofactor metabolic process K03148,K03636,K21029,K21147 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006534,GO:0006535,GO:0006563,GO:0006732,GO:0006777,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008146,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009108,GO:0009605,GO:0009607,GO:0009987,GO:0016053,GO:0016740,GO:0016772,GO:0016779,GO:0016782,GO:0018130,GO:0019344,GO:0019538,GO:0019637,GO:0019720,GO:0019752,GO:0020012,GO:0030312,GO:0030682,GO:0042783,GO:0043170,GO:0043207,GO:0043436,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0044403,GO:0044413,GO:0044415,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0050896,GO:0051186,GO:0051188,GO:0051189,GO:0051701,GO:0051704,GO:0051707,GO:0051805,GO:0051807,GO:0051810,GO:0051832,GO:0051834,GO:0052173,GO:0052200,GO:0052564,GO:0052572,GO:0061605,GO:0070566,GO:0071704,GO:0071944,GO:0075136,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.7.73,2.7.7.80,2.8.1.11 0.00000000000000000000000000000005074 127.0
BYD3_k127_6204718_7 Uncharacterized conserved protein (DUF2203) - - - 0.0000000000000000000000001425 109.0
BYD3_k127_6204718_8 COG0526 Thiol-disulfide isomerase and thioredoxins - - - 0.00000000000000000000001206 110.0
BYD3_k127_6204718_9 pfam rdd - - - 0.00001833 57.0
BYD3_k127_6215280_0 PhoH-like protein K06217 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004204 359.0
BYD3_k127_6215280_1 PFAM short chain dehydrogenase - - - 0.00000000000000000000000000000000000000000000004941 173.0
BYD3_k127_6215280_2 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.0000000000000000000006581 100.0
BYD3_k127_6215280_3 COG3668 Plasmid stabilization system protein - - - 0.0000000000000000001914 89.0
BYD3_k127_6217294_0 PFAM fumarylacetoacetate (FAA) hydrolase K01555 - 3.7.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004933 369.0
BYD3_k127_6217294_1 Catalyzes the reversible cleavage of pseudouridine 5'- phosphate (PsiMP) to ribose 5-phosphate and uracil. Functions biologically in the cleavage direction, as part of a pseudouridine degradation pathway K16329 - 4.2.1.70 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001766 306.0
BYD3_k127_6217294_2 histidyl-tRNA synthetase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007096 270.0
BYD3_k127_6217294_3 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 - 3.1.22.4 0.000000000000000000000000000000000000000000000000007121 185.0
BYD3_k127_6217294_4 Transposase IS200 like - - - 0.0000000000000000000000000000000000000000000000001114 181.0
BYD3_k127_6217294_5 PFAM penicillin-binding protein transpeptidase - - - 0.0000000000000000000000000000000000000000000000002201 196.0
BYD3_k127_6217294_6 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 GO:0000287,GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016072,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019899,GO:0022613,GO:0032296,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043167,GO:0043169,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363 3.1.26.3 0.000000000000000000000000000000000000000000002668 173.0
BYD3_k127_6217294_7 Signal peptidase I K03100 - 3.4.21.89 0.00000000000000000000000000000000000000012 162.0
BYD3_k127_6217294_8 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.000000000000000000207 98.0
BYD3_k127_6227631_0 Cys/Met metabolism PLP-dependent enzyme K01760,K17217 - 4.4.1.1,4.4.1.2,4.4.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001814 496.0
BYD3_k127_6227631_1 glutamate-cysteine ligase activity K06048 GO:0003674,GO:0003824,GO:0016874,GO:0016879 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001003 459.0
BYD3_k127_6227631_10 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 0.0000718 50.0
BYD3_k127_6227631_12 Pfam:N_methyl_2 - - - 0.0003878 50.0
BYD3_k127_6227631_13 Prokaryotic N-terminal methylation motif K02671 - - 0.0005026 49.0
BYD3_k127_6227631_2 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000219 448.0
BYD3_k127_6227631_3 Subtilase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003718 366.0
BYD3_k127_6227631_4 GGDEF domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000119 276.0
BYD3_k127_6227631_5 Belongs to the glycosyl hydrolase 32 family K00692 - 2.4.1.10 0.000000000000000000000000000000000000000000000000000000004439 219.0
BYD3_k127_6227631_6 protein phosphatase 2C domain protein K01090,K20074 - 3.1.3.16 0.000000000000000000000000000000000000000000002484 176.0
BYD3_k127_6227631_7 NfeD-like C-terminal, partner-binding - - - 0.000000000000000001959 91.0
BYD3_k127_6227631_8 Hemolysin-type calcium-binding repeat (2 copies) - - - 0.000000000000000213 93.0
BYD3_k127_6227631_9 Domain of unknown function (DUF4081) K06976 - - 0.0000000000004587 79.0
BYD3_k127_6260811_0 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007 - 2.7.9.2 4.043e-246 775.0
BYD3_k127_6260811_1 Bacterial fructose-1,6-bisphosphatase, glpX-encoded K02446 - 3.1.3.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005729 415.0
BYD3_k127_6260811_2 oxidoreductase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008273 423.0
BYD3_k127_6260811_3 oxidoreductase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003026 400.0
BYD3_k127_6260811_4 Putative methyltransferase K03439 GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008176,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0034708,GO:0036265,GO:0043170,GO:0043412,GO:0043414,GO:0043527,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0106004,GO:0140098,GO:0140101,GO:1901360,GO:1902494,GO:1990234 2.1.1.33 0.00000000000000000000000000000000000000000000000000000000000002787 222.0
BYD3_k127_6260811_5 Transposase - - - 0.0000000000000000000000000000000000000000000000000000001301 203.0
BYD3_k127_6260811_6 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 GO:0003674,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016810,GO:0016811,GO:0018193,GO:0018206,GO:0019538,GO:0031365,GO:0036211,GO:0042586,GO:0043170,GO:0043412,GO:0043686,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:1901564 3.5.1.88 0.00000000000000000000000000000000000000003944 156.0
BYD3_k127_6260811_7 Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions K05524 - - 0.0000000000000000000000000002147 116.0
BYD3_k127_6276879_0 PFAM phenylalanine histidine ammonia-lyase K01745 - 4.3.1.3 5.997e-211 668.0
BYD3_k127_6276879_1 PFAM amidohydrolase K01468 - 3.5.2.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003369 454.0
BYD3_k127_6276879_2 Predicted membrane protein (DUF2339) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004013 341.0
BYD3_k127_6276879_3 Low affinity iron permease - - - 0.000000000000000000000000000000000000000004667 161.0
BYD3_k127_6276879_4 YCII-related domain - - - 0.0000000000000000000000000000000000001988 146.0
BYD3_k127_6310026_0 Type II secretion system K02653 - - 0.0000000000000000000000000000000000000000000000000000000000000000000008442 244.0
BYD3_k127_6310026_1 Tetratricopeptide repeat - - - 0.000000002182 70.0
BYD3_k127_6316260_0 glycosyl transferase group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000255 366.0
BYD3_k127_6316260_1 PHP domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003654 267.0
BYD3_k127_6316260_2 lipoprotein localization to outer membrane K02004 - - 0.00000000000000000000000000000000000000000000005605 183.0
BYD3_k127_6316260_3 Protein of unknown function (DUF3419) K13622 - - 0.000000000000000000000000000000000000003897 149.0
BYD3_k127_6316260_4 - - - - 0.0000000000000000000000000000005947 131.0
BYD3_k127_6316260_5 Glycosyltransferase Family 4 - - - 0.00000000000000000000006022 113.0
BYD3_k127_6344281_0 CHASE3 domain - - - 5.511e-216 687.0
BYD3_k127_6344281_1 Domain in cystathionine beta-synthase and other proteins. - - - 3.763e-201 645.0
BYD3_k127_6344281_2 Domains REC, sigma54 interaction, HTH8 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003124 434.0
BYD3_k127_6344281_3 Pyridine nucleotide-disulphide oxidoreductase K17218 - 1.8.5.4 0.00000000000000000000000000001152 130.0
BYD3_k127_6344281_5 Universal stress protein family - - - 0.000000000001641 78.0
BYD3_k127_6344281_6 Universal stress protein - - - 0.000000001822 68.0
BYD3_k127_6344281_7 Universal stress protein family - - - 0.00006695 54.0
BYD3_k127_6396563_0 Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively K01556 - 3.7.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006489 586.0
BYD3_k127_6396563_1 Amidohydrolase K03392 - 4.1.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008802 494.0
BYD3_k127_6396563_10 Acetyltransferase (GNAT) family - - - 0.0000000000000000000000000000000000000000000000000000033 196.0
BYD3_k127_6396563_11 - K09957 - - 0.000000000000000000000000000000000000000006324 160.0
BYD3_k127_6396563_12 Protein of unknown function (DUF1697) - - - 0.00000000000000000000000000000003929 131.0
BYD3_k127_6396563_13 Protein of unknown function (DUF3224) - - - 0.0000000000000002101 83.0
BYD3_k127_6396563_14 protein kinase activity K10645,K21440 - 2.3.2.27 0.00008419 48.0
BYD3_k127_6396563_2 Catalyzes the hydroxylation of L-kynurenine (L-Kyn) to form 3-hydroxy-L-kynurenine (L-3OHKyn). Required for synthesis of quinolinic acid K00486 - 1.14.13.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002623 454.0
BYD3_k127_6396563_3 alcohol dehydrogenase K13979 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003587 439.0
BYD3_k127_6396563_4 Phytanoyl-CoA dioxygenase (PhyH) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001065 309.0
BYD3_k127_6396563_5 Catalyzes the oxidative ring opening of 3- hydroxyanthranilate to 2-amino-3-carboxymuconate semialdehyde, which spontaneously cyclizes to quinolinate K00452 - 1.13.11.6 0.000000000000000000000000000000000000000000000000000000000000000000000000008045 255.0
BYD3_k127_6396563_6 Cleaves the N-terminal amino acid of tripeptides K01258 GO:0003674,GO:0003824,GO:0004177,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0009987,GO:0016787,GO:0019538,GO:0034641,GO:0034701,GO:0043170,GO:0043603,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0045148,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.11.4 0.000000000000000000000000000000000000000000000000000000000000000000000003597 252.0
BYD3_k127_6396563_7 Peptide methionine sulfoxide reductase K07304 - 1.8.4.11 0.000000000000000000000000000000000000000000000000000000000000000000006871 241.0
BYD3_k127_6396563_8 Translation initiation inhibitor, yjgF family K15067 - 3.5.99.5 0.00000000000000000000000000000000000000000000000000000000000000002229 231.0
BYD3_k127_6396563_9 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses - - - 0.000000000000000000000000000000000000000000000000000000000001059 222.0
BYD3_k127_6412750_0 PFAM Type II secretion system protein E K02652 - - 8.419e-207 657.0
BYD3_k127_6412750_1 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 6.548e-204 644.0
BYD3_k127_6412750_10 BMC - - - 0.0000000000000000000000000000944 119.0
BYD3_k127_6412750_11 von Willebrand factor, type A - - - 0.0000000000000005178 87.0
BYD3_k127_6412750_12 Helix-turn-helix domain K15539 - - 0.000000000001798 78.0
BYD3_k127_6412750_2 Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH K00033 - 1.1.1.343,1.1.1.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000137 475.0
BYD3_k127_6412750_3 PFAM Aldehyde dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009192 452.0
BYD3_k127_6412750_4 PFAM Pyridoxal-5'-phosphate-dependent protein beta subunit K01754 - 4.3.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001225 348.0
BYD3_k127_6412750_5 von Willebrand factor (vWF) type A domain K07114 - - 0.000000000000000000000000000000000000000000000000000000000000000000000003484 255.0
BYD3_k127_6412750_6 type II secretion system K02653 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001003 255.0
BYD3_k127_6412750_7 BMC - - - 0.00000000000000000000000000000000000001568 148.0
BYD3_k127_6412750_8 von Willebrand factor (vWF) type A domain K07114 - - 0.00000000000000000000000000000000000002157 157.0
BYD3_k127_6412750_9 PFAM aminoglycoside hydroxyurea antibiotic resistance kinase K04343 - 2.7.1.72 0.000000000000000000000000000000002117 141.0
BYD3_k127_6467769_0 Belongs to the ClpA ClpB family K03696 - - 2.943e-305 954.0
BYD3_k127_6467769_1 Belongs to the beta-ketoacyl-ACP synthases family K14660 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001657 482.0
BYD3_k127_6467769_10 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 - 4.2.1.59 0.00000000000000000000000000000000000000000000003767 173.0
BYD3_k127_6467769_11 Protein of unknown function (DUF1232) - - - 0.00000000000000000000002668 106.0
BYD3_k127_6467769_12 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.00000000000002671 77.0
BYD3_k127_6467769_13 unfolded protein binding K06142 GO:0001530,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006457,GO:0006807,GO:0008104,GO:0008150,GO:0008152,GO:0008289,GO:0009279,GO:0009987,GO:0010467,GO:0016020,GO:0016043,GO:0019538,GO:0019867,GO:0022417,GO:0022607,GO:0030288,GO:0030312,GO:0030313,GO:0031647,GO:0031975,GO:0032978,GO:0033036,GO:0034613,GO:0042597,GO:0042802,GO:0043163,GO:0043165,GO:0043170,GO:0044085,GO:0044091,GO:0044238,GO:0044462,GO:0044464,GO:0045184,GO:0045229,GO:0050821,GO:0051082,GO:0051179,GO:0051205,GO:0051234,GO:0051604,GO:0051641,GO:0061024,GO:0061077,GO:0065007,GO:0065008,GO:0070727,GO:0071704,GO:0071709,GO:0071840,GO:0071944,GO:0072657,GO:0090150,GO:0097367,GO:1901564 - 0.00005327 53.0
BYD3_k127_6467769_2 TIGRFAM outer membrane protein assembly complex, YaeT protein K07277 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001244 434.0
BYD3_k127_6467769_3 PFAM Phosphate acetyl butaryl transferase K00625 - 2.3.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009665 354.0
BYD3_k127_6467769_4 PFAM Fatty acid desaturase K00507 - 1.14.19.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008795 342.0
BYD3_k127_6467769_5 Putative cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009328 336.0
BYD3_k127_6467769_6 response regulator, receiver - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001027 293.0
BYD3_k127_6467769_7 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009142 276.0
BYD3_k127_6467769_8 involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008374,GO:0008610,GO:0008654,GO:0008780,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016740,GO:0016746,GO:0016747,GO:0019637,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.3.1.129 0.00000000000000000000000000000000000000000000000000000000000000000000000000003953 266.0
BYD3_k127_6467769_9 lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.00000000000000000000000000000000000000000000000000000000000000000000001917 252.0
BYD3_k127_6506406_0 Belongs to the DNA polymerase type-C family. DnaE2 subfamily K14162 - 2.7.7.7 5.648e-294 939.0
BYD3_k127_6506406_1 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004531 437.0
BYD3_k127_6506406_2 Nucleotidyltransferase DNA polymerase involved in DNA repair K03502 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001152 314.0
BYD3_k127_6506406_3 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000149 280.0
BYD3_k127_6506406_4 Protein of unknown function (DUF3419) K13622 - - 0.0000000000000000000000000000000000000000000000000000000000000141 220.0
BYD3_k127_6506406_5 Methylase involved in ubiquinone menaquinone biosynthesis K13623 - - 0.0000000000000000000000000000000000000000000000000000000000001073 219.0
BYD3_k127_6506406_6 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K14161 - - 0.000000000000000000000000000000000002217 154.0
BYD3_k127_6506406_7 recA bacterial DNA recombination protein - - - 0.00000000000000000000000000483 119.0
BYD3_k127_6506406_8 - - - - 0.000000000000000000005655 100.0
BYD3_k127_6512572_0 PFAM amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001614 483.0
BYD3_k127_6512572_1 e3 binding domain K00658 - 2.3.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004978 289.0
BYD3_k127_6512572_2 chlorophyll binding - - - 0.00000000000000000000000000000000000000000004789 173.0
BYD3_k127_6512572_3 von Willebrand factor, type A K07114 - - 0.00000000000000000004806 102.0
BYD3_k127_6515580_0 Heat shock 70 kDa protein K04043 - - 1.16e-234 740.0
BYD3_k127_6515580_1 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 GO:0006457,GO:0008150,GO:0009987 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006946 409.0
BYD3_k127_6515580_2 Sporulation protein SPS19 K13237 GO:0000003,GO:0003006,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005777,GO:0005782,GO:0006082,GO:0006629,GO:0006631,GO:0007049,GO:0008150,GO:0008152,GO:0008670,GO:0009056,GO:0009062,GO:0009653,GO:0009987,GO:0016042,GO:0016054,GO:0016491,GO:0016627,GO:0016628,GO:0019752,GO:0019953,GO:0022402,GO:0022413,GO:0022414,GO:0030154,GO:0030435,GO:0030437,GO:0031907,GO:0031974,GO:0032502,GO:0032505,GO:0032787,GO:0034293,GO:0042579,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0043934,GO:0043935,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0044422,GO:0044424,GO:0044438,GO:0044439,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0046395,GO:0048468,GO:0048646,GO:0048856,GO:0048869,GO:0051321,GO:0051704,GO:0055114,GO:0070013,GO:0071704,GO:0072329,GO:1901575,GO:1903046 1.3.1.34 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006665 273.0
BYD3_k127_6515580_3 Lipoprotein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001177 277.0
BYD3_k127_6515580_4 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.000000000000000000000000000000000000000000000000000000000000000000003235 249.0
BYD3_k127_6515580_5 Belongs to the glycosyl hydrolase 43 family - - - 0.000000000000000000000000000000000000000000000000000000003604 228.0
BYD3_k127_6515580_6 nucleotide metabolic process - - - 0.0000000000000000000000000000000000000000000000000002051 194.0
BYD3_k127_6515580_7 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 GO:0000166,GO:0000774,GO:0001871,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0008150,GO:0009986,GO:0017076,GO:0030234,GO:0030246,GO:0030247,GO:0030554,GO:0036094,GO:0044464,GO:0050790,GO:0051082,GO:0060589,GO:0060590,GO:0065007,GO:0065009,GO:0097159,GO:0098772,GO:1901265,GO:1901363,GO:2001065 - 0.00000000000000000000001434 111.0
BYD3_k127_6531466_0 Methylmalonyl-CoA mutase K01848 - 5.4.99.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000311 581.0
BYD3_k127_6531466_1 Patatin-like phospholipase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000146 486.0
BYD3_k127_6531466_10 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00627 - 2.3.1.12 0.00000000000000000000000000000000000000000000000000000000000000004242 227.0
BYD3_k127_6531466_11 PFAM Organic solvent tolerance protein K04744 - - 0.0000000000000000000000000000000000000000000000000000000000007957 237.0
BYD3_k127_6531466_12 chitinase - - - 0.0000000000000000000000000000000000000000000000000009786 190.0
BYD3_k127_6531466_13 EamA-like transporter family - - - 0.00000000000000000000000000000002154 138.0
BYD3_k127_6531466_14 Glycosyltransferase Family 4 - - - 0.0000000000000000000000000000004613 135.0
BYD3_k127_6531466_16 - - - - 0.000004417 56.0
BYD3_k127_6531466_17 bacterial-type flagellum-dependent cell motility K03641 - - 0.00001159 59.0
BYD3_k127_6531466_18 - - - - 0.0005669 51.0
BYD3_k127_6531466_2 Two component, sigma54 specific, transcriptional regulator, Fis family K02667,K07713,K07714,K19641 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003976 446.0
BYD3_k127_6531466_3 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006606 406.0
BYD3_k127_6531466_4 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001492 394.0
BYD3_k127_6531466_5 aminopeptidase activity K19689 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003009 332.0
BYD3_k127_6531466_6 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 GO:0003674,GO:0005488,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008289,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0019637,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.4.1.182 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000103 300.0
BYD3_k127_6531466_7 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD K02536 - 2.3.1.191 0.000000000000000000000000000000000000000000000000000000000000000000000000000182 268.0
BYD3_k127_6531466_8 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001534 269.0
BYD3_k127_6531466_9 Chitinase class I - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001238 254.0
BYD3_k127_6547502_0 Prolyl oligopeptidase family - - - 3.392e-248 786.0
BYD3_k127_6547502_1 Aminopeptidase P, N-terminal domain K01262 - 3.4.11.9 0.00000000000000000000000000000000000000000000000000000000000000000000003287 260.0
BYD3_k127_6547502_2 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.0000000000000000000000001088 108.0
BYD3_k127_6547502_3 Belongs to the bacterial ribosomal protein bL34 family K02914 - - 0.00000000000006237 72.0
BYD3_k127_6547502_4 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.000000000001988 74.0
BYD3_k127_6547502_5 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000000000006858 78.0
BYD3_k127_6561533_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0 1092.0
BYD3_k127_6561533_1 ERAP1-like C-terminal domain K01256 - 3.4.11.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004497 458.0
BYD3_k127_6561533_10 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 GO:0000166,GO:0000774,GO:0001871,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0008150,GO:0009986,GO:0017076,GO:0030234,GO:0030246,GO:0030247,GO:0030554,GO:0036094,GO:0044464,GO:0050790,GO:0051082,GO:0060589,GO:0060590,GO:0065007,GO:0065009,GO:0097159,GO:0098772,GO:1901265,GO:1901363,GO:2001065 - 0.0000000000000000008581 94.0
BYD3_k127_6561533_11 TIGRFAM TonB K03832 - - 0.0000000117 68.0
BYD3_k127_6561533_12 - - - - 0.00000006963 55.0
BYD3_k127_6561533_13 gluconolactonase activity - - - 0.0000004913 63.0
BYD3_k127_6561533_14 - - - - 0.0003881 44.0
BYD3_k127_6561533_2 Amidohydrolase family K12960 - 3.5.4.28,3.5.4.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003251 416.0
BYD3_k127_6561533_3 C-terminal domain of CHU protein family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001509 352.0
BYD3_k127_6561533_4 The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate K00772,K03783 - 2.4.2.1,2.4.2.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006117 322.0
BYD3_k127_6561533_5 PFAM Branched-chain amino acid transport system permease component K02057 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003598 301.0
BYD3_k127_6561533_6 PFAM Branched-chain amino acid transport system permease component K02057 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004047 289.0
BYD3_k127_6561533_7 uridine kinase K00876 - 2.7.1.48 0.000000000000000000000000000000000000000000000000000000000000005695 223.0
BYD3_k127_6561533_8 Cytidine and deoxycytidylate deaminase zinc-binding region K01489 - 3.5.4.5 0.00000000000000000000000000000000000000000000002015 173.0
BYD3_k127_6561533_9 CS domain K13993 - - 0.00000000000000000000000000000000000001049 150.0
BYD3_k127_6575814_0 Major facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001892 579.0
BYD3_k127_6575814_1 TIGRFAM haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED K01091,K01838 - 3.1.3.18,5.4.2.6 0.000000000000000000000000000000000002249 146.0
BYD3_k127_6575814_2 phytanoyl-CoA dioxygenase - - - 0.000000000000000000000000000000000004843 145.0
BYD3_k127_6575814_3 PFAM FAD linked oxidase domain protein K00102 - 1.1.2.4 0.00000000000000000000000000000000006673 136.0
BYD3_k127_6575814_4 Pyridoxal-dependent decarboxylase, pyridoxal binding domain K01586 - 4.1.1.20 0.000000000000000000008899 95.0
BYD3_k127_6575814_5 Tetratricopeptide repeat K20543 - - 0.0000002493 63.0
BYD3_k127_6653700_0 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002444 505.0
BYD3_k127_6653700_1 TIGRFAM diguanylate cyclase (GGDEF) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004808 402.0
BYD3_k127_6653700_10 Nucleoredoxin K17609 GO:0000003,GO:0000902,GO:0000904,GO:0001558,GO:0003006,GO:0003674,GO:0003824,GO:0004791,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006935,GO:0008150,GO:0008152,GO:0009605,GO:0009636,GO:0009653,GO:0009826,GO:0009856,GO:0009860,GO:0009932,GO:0009987,GO:0010035,GO:0010038,GO:0010183,GO:0010769,GO:0015036,GO:0016043,GO:0016049,GO:0016209,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0022414,GO:0022603,GO:0022604,GO:0030154,GO:0032501,GO:0032502,GO:0032989,GO:0040007,GO:0040008,GO:0040011,GO:0042221,GO:0042330,GO:0043900,GO:0044424,GO:0044444,GO:0044464,GO:0044706,GO:0045595,GO:0046686,GO:0048468,GO:0048588,GO:0048589,GO:0048638,GO:0048856,GO:0048868,GO:0048869,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0050918,GO:0051128,GO:0051239,GO:0051510,GO:0051704,GO:0051716,GO:0055114,GO:0060284,GO:0060560,GO:0065007,GO:0070887,GO:0071840,GO:0080092,GO:0097237,GO:0098754,GO:0098869,GO:1990748,GO:2000241 1.8.1.8 0.0004327 49.0
BYD3_k127_6653700_2 Cystathionine beta-lyase K01760 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0003962,GO:0004121,GO:0004123,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006534,GO:0006555,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009069,GO:0009070,GO:0009086,GO:0009092,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0016829,GO:0016846,GO:0017144,GO:0019279,GO:0019343,GO:0019344,GO:0019346,GO:0019752,GO:0019842,GO:0030170,GO:0036094,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046394,GO:0048037,GO:0050662,GO:0050667,GO:0070279,GO:0071265,GO:0071266,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.4.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009152 352.0
BYD3_k127_6653700_3 Subtilase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000798 339.0
BYD3_k127_6653700_4 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001797 314.0
BYD3_k127_6653700_5 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 - 6.3.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003688 299.0
BYD3_k127_6653700_6 Maf-like protein K06287 - - 0.0000000000000000000000000000000000000000000000015 183.0
BYD3_k127_6653700_7 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 - 2.7.6.3 0.0000000000000000000000000000000003263 138.0
BYD3_k127_6653700_8 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.000000000000000444 82.0
BYD3_k127_6653700_9 Belongs to the UPF0232 family - - - 0.00000000565 63.0
BYD3_k127_6673097_0 ADP-glyceromanno-heptose 6-epimerase activity K03274 - 5.1.3.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008054 389.0
BYD3_k127_6673097_1 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.000000000000000000000000000000000000000000000000000000000000000000499 239.0
BYD3_k127_6673097_2 PFAM ABC-1 domain protein - - - 0.000000000000000000000000000000000003008 149.0
BYD3_k127_6673097_3 Glyoxalase - - - 0.0000000000000006406 80.0
BYD3_k127_6673097_4 glyoxalase - - - 0.00000000005002 63.0
BYD3_k127_6770706_0 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 - 2.1.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005208 308.0
BYD3_k127_6770706_1 Aldehyde dehydrogenase K00294 - 1.2.1.88 0.000000000000000000000005847 101.0
BYD3_k127_6770706_2 Belongs to the UPF0176 family K07146 - - 0.000000000356 65.0
BYD3_k127_6782269_0 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002659 476.0
BYD3_k127_6782269_1 Belongs to the phosphoglycerate kinase family K00927 - 2.7.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000396 434.0
BYD3_k127_6782269_10 Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase K05808 - - 0.0000000000000000000000000000000582 131.0
BYD3_k127_6782269_11 von Willebrand factor (vWF) type A domain K07114 - - 0.000000000000000000000000000004891 130.0
BYD3_k127_6782269_12 Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion K06023 - - 0.00000000000000000001508 98.0
BYD3_k127_6782269_13 Phosphotransferase System K11189 - - 0.000000000000000015 85.0
BYD3_k127_6782269_2 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001325 377.0
BYD3_k127_6782269_3 RNA polymerase sigma-54 factor K03092 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005944 339.0
BYD3_k127_6782269_4 Arginase family K01476 - 3.5.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004355 289.0
BYD3_k127_6782269_5 Displays ATPase and GTPase activities K06958 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003384 268.0
BYD3_k127_6782269_6 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000002117 221.0
BYD3_k127_6782269_7 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.00000000000000000000000000000000000000000000000001267 184.0
BYD3_k127_6782269_8 AcrB/AcrD/AcrF family K03296 - - 0.0000000000000000000000000000000000000000000000002762 197.0
BYD3_k127_6782269_9 PTS system fructose IIA component K02793,K02794,K02821 - 2.7.1.191,2.7.1.194 0.000000000000000000000000000000004478 132.0
BYD3_k127_679023_0 oxidoreductase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008205 472.0
BYD3_k127_679023_1 transglycosylase K08309 - - 0.0002643 53.0
BYD3_k127_6839333_0 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006505 560.0
BYD3_k127_6839333_1 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001885 447.0
BYD3_k127_6839333_2 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002012 428.0
BYD3_k127_6839333_3 NnrU protein K21310 - 2.1.1.334 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000913 301.0
BYD3_k127_6887682_0 Sulfatase K01133 - 3.1.6.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000209 372.0
BYD3_k127_6887682_1 FR47-like protein - - - 0.00000000000000000000000000000000000000000000001399 175.0
BYD3_k127_6887682_2 - - - - 0.00000000000000000000004305 101.0
BYD3_k127_6887682_3 TIGRFAM dihydroorotase, multifunctional complex type K01464 - 3.5.2.2 0.0000000000000000003495 87.0
BYD3_k127_6887682_4 Cupin 2, conserved barrel domain protein - - - 0.0000000000001283 79.0
BYD3_k127_6893583_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009599 392.0
BYD3_k127_6893583_1 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.0000000000000000000000000000000000000000000000000000000000000000002151 238.0
BYD3_k127_6895352_0 PFAM ABC transporter K02056 - 3.6.3.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006784 565.0
BYD3_k127_6895352_1 Citrate synthase, C-terminal domain K01647 - 2.3.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005767 445.0
BYD3_k127_6895352_2 PFAM Basic membrane lipoprotein K07335 - - 0.0000000000000000000000000000000000000000000001888 172.0
BYD3_k127_6895352_3 S23 ribosomal protein - - - 0.0000000000000000000000000000000000000000007642 161.0
BYD3_k127_6895352_4 PFAM S23 ribosomal protein - - - 0.000000000000000000000000000000008341 130.0
BYD3_k127_6899055_0 Transmembrane secretion effector - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001564 391.0
BYD3_k127_6899055_1 integral membrane protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002956 290.0
BYD3_k127_6899055_2 Sulfatase-modifying factor enzyme 1 - - - 0.0000000000000000000000000000000000000000000000002286 183.0
BYD3_k127_6899055_3 Putative DNA-binding domain - - - 0.0000000000000000000000001857 121.0
BYD3_k127_6899055_4 - - - - 0.0000000000000000001215 101.0
BYD3_k127_6906763_0 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 7.604e-209 659.0
BYD3_k127_6906763_1 Transcriptional regulatory protein, C terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000009918 299.0
BYD3_k127_691705_0 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008578 494.0
BYD3_k127_691705_1 Large family of predicted nucleotide-binding domains - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007375 392.0
BYD3_k127_691705_2 The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis K00756,K00758 - 2.4.2.2,2.4.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004871 279.0
BYD3_k127_691705_3 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity K00554,K00991,K01770,K12506 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0008150,GO:0008152,GO:0008270,GO:0008685,GO:0009058,GO:0009108,GO:0009987,GO:0016829,GO:0016849,GO:0030145,GO:0042180,GO:0042181,GO:0042802,GO:0043167,GO:0043169,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:1901576,GO:1901661,GO:1901663 2.1.1.228,2.7.7.60,4.6.1.12 0.000000000000000000000000000000000000000000001289 170.0
BYD3_k127_691705_4 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) K00991 GO:0003674,GO:0003824,GO:0016740,GO:0016772,GO:0016779,GO:0050518,GO:0070567 2.7.7.60 0.0000000000000000000000000000000000000000002681 166.0
BYD3_k127_6955482_0 PFAM ABC transporter related K06020 - 3.6.3.25 3.191e-289 897.0
BYD3_k127_6955482_1 - - - - 0.00000000000000009246 89.0
BYD3_k127_6959066_0 Protein of unknown function (DUF1800) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001132 600.0
BYD3_k127_6959066_1 ABC transporter K09691 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002628 452.0
BYD3_k127_6959066_2 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008656 373.0
BYD3_k127_6959066_3 Domain of unknown function (DUF2088) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001449 280.0
BYD3_k127_6959066_4 ABC-2 type transporter K09690 - - 0.0000000000000000000000000000000000000000000000000000000000000000001398 240.0
BYD3_k127_6959066_5 PFAM Glycosyl transferase, group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000001204 231.0
BYD3_k127_6959066_6 PFAM Rhomboid family - - - 0.0000000000000000000000000000000000000000000000000000000000001092 220.0
BYD3_k127_6959066_7 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000006378 211.0
BYD3_k127_6959066_8 Glycosyltransferase like family 2 K12988 - - 0.0000000000000000000000000000007588 134.0
BYD3_k127_6959066_9 Cation efflux family K16264 - - 0.000000000000000003623 87.0
BYD3_k127_6964254_0 von Willebrand factor (vWF) type A domain K02448 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003927 308.0
BYD3_k127_6964254_1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.000000000000000000000000000000000000000001468 165.0
BYD3_k127_6987813_0 Type II/IV secretion system protein K02669 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001524 465.0
BYD3_k127_6987813_1 Peptidase, M16 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002431 244.0
BYD3_k127_6987813_2 Methylmalonyl-CoA mutase K01848 - 5.4.99.2 0.00000000000000000000000000000000000000000000000000000000001592 211.0
BYD3_k127_698806_0 UDP binding domain K00012 - 1.1.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004383 567.0
BYD3_k127_698806_1 NAD(P)H-binding K01784,K02473 - 5.1.3.2,5.1.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003725 347.0
BYD3_k127_698806_2 Carboxypeptidase regulatory-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001171 278.0
BYD3_k127_7010156_0 DNA/RNA non-specific endonuclease K01173 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000149 324.0
BYD3_k127_7010156_1 phosphatase K01083,K07004 - 3.1.3.8 0.000000000000000000000000000000000000000000000000000000000000000000003093 258.0
BYD3_k127_7010156_2 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 0.000000000000000000000000000000000000000000000003123 182.0
BYD3_k127_7010156_3 Belongs to the multicopper oxidase YfiH RL5 family K05810 - - 0.000000000000000000000000000000000000000000000004864 188.0
BYD3_k127_7010156_4 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.0000000000000000000000000009205 117.0
BYD3_k127_7010156_5 PFAM Endonuclease Exonuclease phosphatase K07004 - - 0.000000000000000001863 100.0
BYD3_k127_7010156_6 - - - - 0.0000000009593 66.0
BYD3_k127_7010156_7 general stress protein - - - 0.0000006321 57.0
BYD3_k127_7092786_0 Phosphomethylpyrimidine kinase K03272 GO:0000271,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0006629,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0008713,GO:0008920,GO:0009058,GO:0009059,GO:0009103,GO:0009244,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016301,GO:0016310,GO:0016740,GO:0016757,GO:0016772,GO:0019200,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0046401,GO:0046835,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 2.7.1.167,2.7.7.70 0.0000000000000000000000000000000000000000000000000000000000000004122 232.0
BYD3_k127_7092786_1 Belongs to the glycosyl hydrolase 32 family K00692 - 2.4.1.10 0.000000000000000000000000000000000000000000000000000000000000002353 229.0
BYD3_k127_7092786_2 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose - - - 0.0000000000000000000000000000000000000000000002513 172.0
BYD3_k127_7092786_3 Subtilase family - - - 0.00000000000000000000000000000944 127.0
BYD3_k127_7167768_0 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 - 4.1.99.17 2.013e-222 702.0
BYD3_k127_7167768_1 Glucose / Sorbosone dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008852 568.0
BYD3_k127_7167768_2 glycosyl transferase group 1 K00754 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002993 403.0
BYD3_k127_7167768_3 chaperone-mediated protein folding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009026 396.0
BYD3_k127_7167768_4 TIGRFAM polyphosphate nucleotide phosphotransferase, PPK2 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001054 362.0
BYD3_k127_7167768_5 Glucose / Sorbosone dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000372 350.0
BYD3_k127_7167768_6 Domain of unknown function (DUF4142) K08995 - - 0.00000000000000000000000000000000000000001151 160.0
BYD3_k127_7167768_7 Abhydrolase domain containing 18 - - - 0.0000002412 59.0
BYD3_k127_7187683_0 Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine cysteine desulfurase (IscS) system K14058 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001989 341.0
BYD3_k127_7187683_1 Alpha beta hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006333 291.0
BYD3_k127_7187683_2 RibD C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000378 190.0
BYD3_k127_7187683_3 Sigma-70, region 4 K03088 - - 0.00000000000000000536 91.0
BYD3_k127_7187683_4 Carboxylesterase K06999 - - 0.00000000264 66.0
BYD3_k127_7187683_5 O-antigen ligase like membrane protein - - - 0.00000003625 66.0
BYD3_k127_7187683_6 YbbR-like protein - - - 0.00000008098 59.0
BYD3_k127_7190887_0 - K17285 - - 0.0 1240.0
BYD3_k127_7190887_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001642 504.0
BYD3_k127_7190887_2 DNA Topoisomerase IV K02469 - 5.99.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002783 368.0
BYD3_k127_7190887_3 Haem-degrading - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008337 364.0
BYD3_k127_7190887_4 Protein of unknown function (DUF1800) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000266 343.0
BYD3_k127_7190887_5 SMART tyrosine protein kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005088 301.0
BYD3_k127_7190887_6 Protein of unknown function (DUF1501) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001557 296.0
BYD3_k127_7190887_7 3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase K03660 - 4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000006636 226.0
BYD3_k127_7190887_8 CDP-alcohol phosphatidyltransferase K00995 - 2.7.8.5 0.000000000000000000000000000000000000007526 153.0
BYD3_k127_7192786_0 COG0405 Gamma-glutamyltransferase K00681 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0006082,GO:0006508,GO:0006520,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0008242,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016787,GO:0019538,GO:0019752,GO:0030288,GO:0030313,GO:0031975,GO:0034722,GO:0036374,GO:0042597,GO:0043094,GO:0043102,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044464,GO:0046394,GO:0070011,GO:0071704,GO:0097264,GO:0140096,GO:1901564,GO:1901566,GO:1901576 2.3.2.2,3.4.19.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006218 506.0
BYD3_k127_7192786_1 Natural resistance-associated macrophage protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001524 415.0
BYD3_k127_7192786_2 Mechanosensitive ion channel - - - 0.000000000000000000000000000000000000000000000000000008409 208.0
BYD3_k127_7192786_3 Belongs to the Fur family K03711 - - 0.00000000000000000000000000000000000000000008945 164.0
BYD3_k127_7192786_4 metal-binding protein - - - 0.0000005011 59.0
BYD3_k127_7239234_0 D-galactarate dehydratase Altronate K01685,K01708 - 4.2.1.42,4.2.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003023 401.0
BYD3_k127_7239234_1 KR domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003995 366.0
BYD3_k127_7239234_2 glucosamine-6-phosphate deaminase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007485 354.0
BYD3_k127_7239234_3 Metallopeptidase family M24 - - - 0.0002003 45.0
BYD3_k127_7256418_0 Xylose isomerase-like TIM barrel K06606 - 5.3.99.11 0.00000000000000000000000000000000000000000000000000000000000000004345 233.0
BYD3_k127_7256418_1 lytic transglycosylase activity K08309 - - 0.0000000000000000000000001045 122.0
BYD3_k127_7287704_0 PFAM aminotransferase, class I K00812 - 2.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008414 321.0
BYD3_k127_7287704_1 lysine biosynthetic process via aminoadipic acid - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006032 291.0
BYD3_k127_7287704_2 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000000000000000000000000000000000003062 177.0
BYD3_k127_7287704_3 - - - - 0.00000000000000000000000000000614 137.0
BYD3_k127_7287704_4 Psort location CytoplasmicMembrane, score - - - 0.0000000000000000000000001565 108.0
BYD3_k127_7287704_5 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000000000001108 82.0
BYD3_k127_7287704_6 multi-organism process K03195 - - 0.0008382 51.0
BYD3_k127_7293294_0 Scavenger mRNA decapping enzyme C-term binding K02503 - - 0.0000000000000000000000000000000000000007271 150.0
BYD3_k127_7293294_1 cheY-homologous receiver domain - - - 0.00000000000000000000005259 103.0
BYD3_k127_7293294_2 Tetratricopeptide repeat - - - 0.0000000003012 71.0
BYD3_k127_7293294_3 Diguanylate cyclase phosphodiesterase with GAF sensor - GO:0003674,GO:0006464,GO:0006807,GO:0007154,GO:0007165,GO:0007602,GO:0008150,GO:0008152,GO:0009314,GO:0009416,GO:0009581,GO:0009582,GO:0009583,GO:0009585,GO:0009605,GO:0009628,GO:0009639,GO:0009881,GO:0009883,GO:0009987,GO:0010017,GO:0018298,GO:0019538,GO:0023052,GO:0036211,GO:0038023,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0050789,GO:0050794,GO:0050896,GO:0051606,GO:0051716,GO:0060089,GO:0065007,GO:0071214,GO:0071478,GO:0071482,GO:0071489,GO:0071704,GO:0104004,GO:1901564 - 0.000004764 58.0
BYD3_k127_7295324_0 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 6.151e-203 662.0
BYD3_k127_7295324_1 Sodium Bile acid symporter family K03325 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000745 530.0
BYD3_k127_7295324_10 Mediates influx of magnesium ions K03284 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000009017 229.0
BYD3_k127_7295324_11 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.00000000000000000000000000000000000000000000000000000000000001508 228.0
BYD3_k127_7295324_12 - - - - 0.000000000000000000000000000000000000000000000000000000007723 207.0
BYD3_k127_7295324_13 Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids K19221 - 2.5.1.17 0.0000000000000000000000000000000000000000000000008009 180.0
BYD3_k127_7295324_14 Low molecular weight phosphatase family K03741 - 1.20.4.1 0.00000000000000000000000000000000000000000001827 165.0
BYD3_k127_7295324_15 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000000000000000000000000009153 151.0
BYD3_k127_7295324_16 helix_turn_helix, Arsenical Resistance Operon Repressor K03892 - - 0.000000000000000000000000000000001092 133.0
BYD3_k127_7295324_18 Required for maturation of 30S ribosomal subunits K09748 - - 0.0000000000000000000000000000000216 133.0
BYD3_k127_7295324_19 Phosphatidylglycerophosphatase A K01095 - 3.1.3.27 0.000000000000000000000000005466 117.0
BYD3_k127_7295324_2 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000404 376.0
BYD3_k127_7295324_20 Hemerythrin HHE cation binding domain - - - 0.000000000000000000002365 106.0
BYD3_k127_7295324_21 Transglycosylase associated protein - - - 0.000000000000000002238 87.0
BYD3_k127_7295324_22 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.000000000000001189 81.0
BYD3_k127_7295324_23 PFAM Adenylate cyclase K05873 - 4.6.1.1 0.00000000000004164 79.0
BYD3_k127_7295324_24 - - - - 0.000000002736 63.0
BYD3_k127_7295324_25 Periplasmic or secreted lipoprotein - - - 0.000000008526 68.0
BYD3_k127_7295324_26 HAF family - - - 0.0000004265 61.0
BYD3_k127_7295324_3 Participates in both transcription termination and antitermination K02600 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008041 362.0
BYD3_k127_7295324_4 Bacterial regulatory protein, Fis family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009266 358.0
BYD3_k127_7295324_5 Substrate-binding protein K10543 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001184 311.0
BYD3_k127_7295324_6 pfam abc K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002675 299.0
BYD3_k127_7295324_7 DHH family K06881 - 3.1.13.3,3.1.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000002445 250.0
BYD3_k127_7295324_8 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000003571 251.0
BYD3_k127_7295324_9 ROK family K00845 - 2.7.1.2 0.0000000000000000000000000000000000000000000000000000000000000005505 230.0
BYD3_k127_7419402_0 POT family K03305 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004233 295.0
BYD3_k127_7419402_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000161 280.0
BYD3_k127_7419402_2 protein kinase activity - - - 0.000000000000000002562 94.0
BYD3_k127_7429807_0 Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs K04094 - 2.1.1.74 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000512 486.0
BYD3_k127_7429807_1 Phage integrase, N-terminal SAM-like domain K03733,K04763 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003729 286.0
BYD3_k127_7429807_2 Sulfite exporter TauE/SafE K07090 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005351 257.0
BYD3_k127_7429807_3 von Willebrand factor, type A K07114 - - 0.00000000000000000000000000004516 131.0
BYD3_k127_7429807_4 PFAM von Willebrand factor type A K07114 - - 0.000000000000000000000000196 119.0
BYD3_k127_7429807_5 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01950 - 6.3.5.1 0.00000000000000000000653 94.0
BYD3_k127_7429807_6 - - - - 0.00000000000000000002308 99.0
BYD3_k127_7429807_7 Protein of unknown function (DUF541) K09807 - - 0.0000000000000000001504 97.0
BYD3_k127_7466667_0 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) K03110 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002167 347.0
BYD3_k127_7466667_1 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006407 306.0
BYD3_k127_7489556_0 Doubled CXXCH motif (Paired_CXXCH_1) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001034 292.0
BYD3_k127_7489556_1 cyclic nucleotide-binding K01420,K10914 - - 0.000000000000000000000000000000000000000000000000000004963 199.0
BYD3_k127_7489556_2 - - - - 0.00000000000000000000000000000000000000000000000000001202 213.0
BYD3_k127_7489556_3 AMP binding - - - 0.0005061 44.0
BYD3_k127_7516089_0 Asparaginase K13051 - 3.4.19.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002891 402.0
BYD3_k127_7516089_1 Belongs to the CinA family K03742 - 3.5.1.42 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001639 377.0
BYD3_k127_7516089_2 COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases K20616 - - 0.0000000000000000000000000000000000000000000000000000004459 203.0
BYD3_k127_7516089_3 Polyprenyl synthetase K01823 GO:0003674,GO:0003824,GO:0004452,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006629,GO:0006644,GO:0006720,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016853,GO:0016860,GO:0016863,GO:0019637,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044464,GO:0046490,GO:0071704,GO:0090407,GO:1901576 5.3.3.2 0.000000000000000000000000000000000000000000002208 181.0
BYD3_k127_7516089_4 Carotene biosynthesis associated membrane protein K08977 - 4.2.1.161 0.000000000000000000000000000001062 136.0
BYD3_k127_7516089_5 FAD dependent oxidoreductase K10027 - 1.3.99.26,1.3.99.28,1.3.99.29,1.3.99.31 0.000000000000000000000000000005384 120.0
BYD3_k127_7537658_0 PFAM NAD dependent epimerase dehydratase family K12454 - 5.1.3.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005055 526.0
BYD3_k127_7537658_1 Wzt C-terminal domain K09691 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001741 418.0
BYD3_k127_7537658_10 TIGRFAM methyltransferase FkbM family - - - 0.0000000000000000000000000000000001074 143.0
BYD3_k127_7537658_11 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000003734 143.0
BYD3_k127_7537658_12 NAD synthase - - - 0.000000000000000000000000000000004058 131.0
BYD3_k127_7537658_13 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000003044 128.0
BYD3_k127_7537658_2 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006433 329.0
BYD3_k127_7537658_3 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.00000000000000000000000000000000000000000000000000000000000000000001151 238.0
BYD3_k127_7537658_4 Glycosyltransferase like family 2 - - - 0.0000000000000000000000000000000000000000000000000000000006228 211.0
BYD3_k127_7537658_5 Methionine biosynthesis protein MetW - - - 0.00000000000000000000000000000000000000000000000000000009496 203.0
BYD3_k127_7537658_6 Protein of unknown function (DUF563) - - - 0.0000000000000000000000000000000000000000000000002671 190.0
BYD3_k127_7537658_7 rRNA processing K21402 - - 0.00000000000000000000000000000000000000000000006277 178.0
BYD3_k127_7537658_8 Methyltransferase FkbM domain - - - 0.00000000000000000000000000000000000000001662 162.0
BYD3_k127_7537658_9 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000000000000002054 157.0
BYD3_k127_7560873_0 Belongs to the MlaE permease family K02066 - - 0.00000000000000000000000000000000000000000000000000000000000000000001909 240.0
BYD3_k127_7560873_1 ABC transporter K02065 - - 0.0000000000000000000000000000000000000000000000000000000000000000004014 239.0
BYD3_k127_7560873_2 PFAM Mammalian cell entry related domain protein K02067 - - 0.0000000000000000000000000000000000000000000000001227 192.0
BYD3_k127_7560873_3 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000006357 130.0
BYD3_k127_7560873_4 Belongs to the SOS response-associated peptidase family - - - 0.000000000000000000000000006663 118.0
BYD3_k127_7560873_5 - - - - 0.0000004944 52.0
BYD3_k127_7560873_6 PFAM Uncharacterised protein domain Spy-rel - - - 0.000007043 55.0
BYD3_k127_760088_0 Two component, sigma54 specific, transcriptional regulator, Fis family K07713,K07714,K19641 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002024 445.0
BYD3_k127_760088_1 Transglycosylase K05365 - 2.4.1.129,3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002781 456.0
BYD3_k127_760088_2 phosphorelay sensor kinase activity K02668 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003059 289.0
BYD3_k127_760088_3 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K13924 - 2.1.1.80,3.1.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003711 283.0
BYD3_k127_760088_4 Glycosyltransferase family 9 (heptosyltransferase) K02843 - - 0.000000000000000000000000000000000000000000000000000000008281 211.0
BYD3_k127_760088_5 Polynucleotide kinase 3 phosphatase - - - 0.00000000000000000000000000000000000000001139 159.0
BYD3_k127_760088_6 Belongs to the mannose-6-phosphate isomerase type 2 family K16011 - 2.7.7.13,5.3.1.8 0.0000000000000000000000000000000000002364 144.0
BYD3_k127_760088_7 COG0451 Nucleoside-diphosphate-sugar epimerases K01784 - 5.1.3.2 0.000000000000000000000001042 115.0
BYD3_k127_760088_8 Belongs to the K01496,K11755 - 3.5.4.19,3.6.1.31 0.0000000000000000000608 91.0
BYD3_k127_760088_9 general secretion pathway protein K02456,K02650 - - 0.00000008488 60.0
BYD3_k127_7616762_0 TonB-dependent receptor - - - 1.577e-218 716.0
BYD3_k127_7616762_1 HI0933-like protein K07007 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003307 445.0
BYD3_k127_7616762_10 Tetratricopeptide repeat - - - 0.0000001297 64.0
BYD3_k127_7616762_11 - - - - 0.00004802 47.0
BYD3_k127_7616762_12 PFAM Peptidase S24 S26A S26B, conserved region - - - 0.0001322 50.0
BYD3_k127_7616762_2 D-ala-D-ala dipeptidase K08641 - 3.4.13.22 0.000000000000000000000000000000000000000000000000000000000000000000000000001084 259.0
BYD3_k127_7616762_3 GlcNAc-PI de-N-acetylase K01463 - - 0.00000000000000000000000000000000000000000000000000000006423 204.0
BYD3_k127_7616762_4 Mycothiol maleylpyruvate isomerase N-terminal domain - - - 0.0000000000000000000000000000000000000000000000539 177.0
BYD3_k127_7616762_5 Belongs to the UPF0312 family - - - 0.0000000000000000000000000000000000003793 148.0
BYD3_k127_7616762_6 Beta-lactamase superfamily domain - - - 0.0000000000000000000000000000002292 133.0
BYD3_k127_7616762_7 glycosyl transferase group 1 - - - 0.0000000000000000000000000001807 125.0
BYD3_k127_7616762_8 DnaJ molecular chaperone homology domain - - - 0.000000000000000000000000001791 122.0
BYD3_k127_7616762_9 - - - - 0.000000000000000001097 98.0
BYD3_k127_7725865_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1102.0
BYD3_k127_7725865_1 Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide K08641 GO:0003674,GO:0003824,GO:0004180,GO:0004181,GO:0006508,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0008233,GO:0008235,GO:0008237,GO:0008238,GO:0009046,GO:0009605,GO:0009991,GO:0016787,GO:0019538,GO:0031667,GO:0042594,GO:0043170,GO:0044238,GO:0050896,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.13.22 0.00000000000000000000000000000000000000000000000000003549 198.0
BYD3_k127_7725865_2 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.00000000000000000000000000000000000000000000002872 174.0
BYD3_k127_7725865_3 metallopeptidase activity - - - 0.000000000000000000000000000003189 130.0
BYD3_k127_7725865_4 3-demethylubiquinone-9 3-O-methyltransferase activity K00568 - 2.1.1.222,2.1.1.64 0.000000000000000000000000005559 117.0
BYD3_k127_7725865_5 Protein of unknown function (DUF2695) - - - 0.0000000000106 68.0
BYD3_k127_7730672_0 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001483 427.0
BYD3_k127_7730672_1 PFAM Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001432 317.0
BYD3_k127_7730672_2 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K01735,K13829 - 2.7.1.71,4.2.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000005108 262.0
BYD3_k127_7730672_3 lytic transglycosylase activity K03194 - - 0.0000000000000003084 91.0
BYD3_k127_7730672_4 triphosphatase activity - - - 0.0000000000001536 76.0
BYD3_k127_7733354_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 1.65e-281 889.0
BYD3_k127_7733354_1 Peptidase family M28 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002252 534.0
BYD3_k127_7733354_10 PFAM S23 ribosomal protein - - - 0.000000000000000000000000000000000000001511 150.0
BYD3_k127_7733354_11 Methyltransferase domain - - - 0.0000000000000000000000008586 111.0
BYD3_k127_7733354_2 PFAM amino acid permease-associated region K03294 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002864 509.0
BYD3_k127_7733354_3 DNA protecting protein DprA K04096 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009805 308.0
BYD3_k127_7733354_4 COG0624 Acetylornithine deacetylase Succinyl-diaminopimelate desuccinylase and related K01295 - 3.4.17.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006702 295.0
BYD3_k127_7733354_5 Beta-ketoacyl synthase, C-terminal domain K09458 - 2.3.1.179 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004105 280.0
BYD3_k127_7733354_6 S1/P1 Nuclease - - - 0.000000000000000000000000000000000000000000000000000000000000000006949 237.0
BYD3_k127_7733354_7 DoxX - - - 0.000000000000000000000000000000000000000000000000000002688 195.0
BYD3_k127_7733354_9 LexA-binding, inner membrane-associated putative hydrolase K07038 - - 0.000000000000000000000000000000000000000004939 160.0
BYD3_k127_7762528_0 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004735 567.0
BYD3_k127_7762528_1 protease with the C-terminal PDZ domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001625 514.0
BYD3_k127_7762528_10 Carboxypeptidase N catalytic chain K01292,K07752,K13022 GO:0002673,GO:0002682,GO:0002697,GO:0002920,GO:0003674,GO:0003824,GO:0004180,GO:0004181,GO:0004185,GO:0005575,GO:0005576,GO:0005615,GO:0005622,GO:0005623,GO:0005737,GO:0005794,GO:0005886,GO:0006508,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008235,GO:0008236,GO:0008237,GO:0008238,GO:0009056,GO:0009719,GO:0009725,GO:0009987,GO:0010033,GO:0010467,GO:0010468,GO:0010815,GO:0010817,GO:0012505,GO:0014070,GO:0016020,GO:0016485,GO:0016486,GO:0016787,GO:0017144,GO:0017171,GO:0019222,GO:0019538,GO:0030070,GO:0030141,GO:0030162,GO:0030449,GO:0031347,GO:0031410,GO:0031960,GO:0031982,GO:0032101,GO:0033993,GO:0034641,GO:0036477,GO:0042221,GO:0042445,GO:0042737,GO:0043025,GO:0043170,GO:0043171,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044297,GO:0044421,GO:0044424,GO:0044425,GO:0044444,GO:0044456,GO:0044459,GO:0044464,GO:0045202,GO:0048545,GO:0048583,GO:0050727,GO:0050776,GO:0050789,GO:0050896,GO:0051171,GO:0051246,GO:0051384,GO:0051604,GO:0060255,GO:0065007,GO:0065008,GO:0070008,GO:0070011,GO:0070613,GO:0071704,GO:0071944,GO:0080090,GO:0080134,GO:0097060,GO:0097458,GO:0097708,GO:0098590,GO:0099503,GO:0140096,GO:1901142,GO:1901564,GO:1901565,GO:1901575,GO:1903317,GO:2000257 3.4.17.22,3.4.17.3 0.00000597 59.0
BYD3_k127_7762528_2 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000305 465.0
BYD3_k127_7762528_3 CHAT domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003362 299.0
BYD3_k127_7762528_4 Belongs to the glycosyl hydrolase 32 family K00692 - 2.4.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000002504 286.0
BYD3_k127_7762528_5 Sugar (and other) transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003563 273.0
BYD3_k127_7762528_6 Subtilase family - - - 0.0000000000000000000000000000000000000000000001008 187.0
BYD3_k127_7762528_7 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000004055 153.0
BYD3_k127_7762528_8 Protein of unknown function (DUF4199) - - - 0.00000000000000000000000000000002296 133.0
BYD3_k127_7762528_9 DinB superfamily - - - 0.000000000000001112 84.0
BYD3_k127_7798312_0 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003863 518.0
BYD3_k127_7798312_1 Sodium:solute symporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001755 419.0
BYD3_k127_7798312_2 Two component regulator propeller - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004041 342.0
BYD3_k127_7798312_3 Involved in bacillithiol (BSH) biosynthesis. May catalyze the last step of the pathway, the addition of cysteine to glucosamine malate (GlcN-Mal) to generate BSH K22136 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001289 301.0
BYD3_k127_7852362_0 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.0 2667.0
BYD3_k127_7852362_1 transport - - - 8.687e-273 871.0
BYD3_k127_7852362_2 serine dehydratase beta chain K01752 - 4.3.1.17 2.223e-248 778.0
BYD3_k127_7852362_3 Protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002802 455.0
BYD3_k127_7852362_4 PAS domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005042 440.0
BYD3_k127_7852362_5 ROK family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001403 370.0
BYD3_k127_7852362_6 Protein of unknown function (DUF1800) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007219 330.0
BYD3_k127_7852362_7 Protein of unknown function (DUF1501) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000147 316.0
BYD3_k127_7852362_8 Belongs to the glycosyl hydrolase 32 family K00692 - 2.4.1.10 0.00000000000000000000000000000000000000000003116 174.0
BYD3_k127_7852362_9 - - - - 0.00006846 54.0
BYD3_k127_793372_0 Vault protein inter-alpha-trypsin domain K07114 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001186 621.0
BYD3_k127_793372_1 3D domain protein - - - 0.0000000000000000003247 93.0
BYD3_k127_8079516_0 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00823,K15372 - 2.6.1.19,2.6.1.55 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001253 490.0
BYD3_k127_8079516_1 Bacterial protein of unknown function (DUF885) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002353 464.0
BYD3_k127_8079516_2 PFAM glycosyl transferase family 39 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001695 370.0
BYD3_k127_8079516_3 4-amino-4-deoxy-L-arabinose transferase activity K16648 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009762 354.0
BYD3_k127_8079516_4 peptidase activity K01266 - 3.4.11.19 0.00000000000000000000000000000000000000000000000000000000000000000002217 240.0
BYD3_k127_8134159_0 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101 460.0
BYD3_k127_8134159_1 Carboxypeptidase regulatory-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001491 482.0
BYD3_k127_8134159_10 ABC transporter K02013 - 3.6.3.34 0.00000000000000000000000000000005439 129.0
BYD3_k127_8134159_11 cheY-homologous receiver domain K02657 - - 0.000000000000000000000000000000166 143.0
BYD3_k127_8134159_12 Phosphoglycerate mutase family - - - 0.000000000000000000000000000005646 127.0
BYD3_k127_8134159_13 Binds the 23S rRNA K02909 GO:0003674,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046872,GO:0046914,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000001238 117.0
BYD3_k127_8134159_14 Tetratricopeptide repeat - - - 0.000000000001405 79.0
BYD3_k127_8134159_15 - - - - 0.0000194 56.0
BYD3_k127_8134159_2 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001019 443.0
BYD3_k127_8134159_3 cobalamin-transporting ATPase activity K02014,K16092 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009218 387.0
BYD3_k127_8134159_4 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008092 336.0
BYD3_k127_8134159_5 Protein of unknown function (DUF1385) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002132 255.0
BYD3_k127_8134159_6 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000006427 244.0
BYD3_k127_8134159_7 Signal transducing histidine kinase, homodimeric K02487,K03407,K06596 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000322 261.0
BYD3_k127_8134159_8 Pyridine nucleotide-disulphide oxidoreductase K00384 - 1.8.1.9 0.000000000000000000000000000000000000000000000000000000006241 210.0
BYD3_k127_8134159_9 Protein of unknown function (DUF421) - - - 0.000000000000000000000000000000000000000000000003189 178.0
BYD3_k127_8150944_0 PFAM aminotransferase, class I K10907 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001621 492.0
BYD3_k127_8150944_1 AMP-binding enzyme K01897 - 6.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007573 496.0
BYD3_k127_8150944_2 PFAM Polysaccharide biosynthesis protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001475 461.0
BYD3_k127_8150944_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009785 368.0
BYD3_k127_8150944_4 Bacterial regulatory proteins, tetR family K13770 - - 0.000000000000000000000000000000000000000000000004152 179.0
BYD3_k127_8150944_5 Belongs to the peptidase S1C family K04771 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005575,GO:0005623,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0016787,GO:0017171,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043170,GO:0044238,GO:0044464,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.21.107 0.000000000000000000002202 107.0
BYD3_k127_8150944_6 Polysaccharide biosynthesis/export protein K01991 - - 0.00000000000004429 83.0
BYD3_k127_8172346_0 oxidoreductase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002802 557.0
BYD3_k127_8172346_1 Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB) K02549 - 4.2.1.113 0.000000000000000000000000000000000000000000000000000000000000000007272 229.0
BYD3_k127_8172346_2 oxidoreductase activity - - - 0.0000000000000000000000006594 110.0
BYD3_k127_8225561_0 amino acid - - - 1.839e-247 781.0
BYD3_k127_8225561_1 amino acid - - - 1.916e-246 777.0
BYD3_k127_8225561_2 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 GO:0000166,GO:0003674,GO:0003824,GO:0004107,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009423,GO:0009987,GO:0010181,GO:0016053,GO:0016829,GO:0016835,GO:0016838,GO:0019438,GO:0019752,GO:0032553,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050662,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 4.2.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001511 420.0
BYD3_k127_8225561_3 Belongs to the GARS family K01945 - 6.3.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002203 372.0
BYD3_k127_8225561_4 Probable zinc-ribbon domain - - - 0.000000000000000000000002026 106.0
BYD3_k127_8225561_5 EamA-like transporter family - - - 0.000000000000001482 84.0
BYD3_k127_8235090_0 Sulfatase-modifying factor enzyme 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001124 338.0
BYD3_k127_8235090_1 - - - - 0.000000000000000000000000000000000000000003847 160.0
BYD3_k127_8235090_3 - - - - 0.000000000000000000000000000001994 130.0
BYD3_k127_8235090_4 Phosphate-starvation-inducible E - - - 0.00000000000000000000001339 106.0
BYD3_k127_8235090_5 Belongs to the ompA family - - - 0.000000000000000353 89.0
BYD3_k127_8235090_6 Protein of unknown function (DUF2490) - - - 0.000000000000004752 85.0
BYD3_k127_8235090_7 Protein of unknown function (DUF2490) - - - 0.0000000000005848 78.0
BYD3_k127_8235090_8 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.00000002728 65.0
BYD3_k127_830279_0 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal K00457 - 1.13.11.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002043 505.0
BYD3_k127_830279_1 Biopterin-dependent aromatic amino acid hydroxylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003702 249.0
BYD3_k127_830279_2 CRP FNR family - - - 0.0000000000000000000000000000000000000000000000004119 187.0
BYD3_k127_830279_3 PFAM Acetyltransferase (GNAT) family K03395 - 2.3.1.60 0.000000000000000000000000000000000000000000000001902 180.0
BYD3_k127_830279_4 helix_turn_helix ASNC type K03719 - - 0.000000000000000000000000000000000000000001726 160.0
BYD3_k127_830279_5 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000001029 134.0
BYD3_k127_830279_6 heme binding - - - 0.000000000000000000000000000005918 123.0
BYD3_k127_830279_7 transcriptional regulator K07665 - - 0.0000000000000001156 85.0
BYD3_k127_8325915_0 Bacterial regulatory protein, Fis family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008828 405.0
BYD3_k127_8325915_1 Belongs to the peptidase S8 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009274 297.0
BYD3_k127_8325915_10 PFAM Peptidoglycan-binding domain 1 protein - - - 0.0000000000000000000000000000000000000002922 171.0
BYD3_k127_8325915_11 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase K02395 - - 0.000000000000000000000006663 119.0
BYD3_k127_8325915_12 lysozyme - - - 0.00000000000000000001009 108.0
BYD3_k127_8325915_13 - - - - 0.00000000000000000001074 108.0
BYD3_k127_8325915_14 - - - - 0.00000000000000000001506 103.0
BYD3_k127_8325915_15 n-acetylmuramoyl-L-alanine amidase K01448 GO:0005575,GO:0005623,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0044464 3.5.1.28 0.00000000000000000004813 106.0
BYD3_k127_8325915_17 Ami_3 K01448 - 3.5.1.28 0.0000000000000003071 92.0
BYD3_k127_8325915_18 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family - - - 0.0000000003499 73.0
BYD3_k127_8325915_19 PFAM cell wall hydrolase autolysin K01448 - 3.5.1.28 0.0000000592 66.0
BYD3_k127_8325915_2 PFAM Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase K01448 - 3.5.1.28 0.00000000000000000000000000000000000000000000000000000000000000000000001829 269.0
BYD3_k127_8325915_20 - - - - 0.00005517 54.0
BYD3_k127_8325915_3 - - - - 0.000000000000000000000000000000000000000000000000000000000593 216.0
BYD3_k127_8325915_4 - - - - 0.000000000000000000000000000000000000000000000000000000003454 213.0
BYD3_k127_8325915_5 - - - - 0.00000000000000000000000000000000000000000000000000001861 204.0
BYD3_k127_8325915_6 - - - - 0.0000000000000000000000000000000000000000000000000000688 209.0
BYD3_k127_8325915_7 Murein-degrading enzyme that degrades murein glycan strands and insoluble, high-molecular weight murein sacculi, with the concomitant formation of a 1,6-anhydromuramoyl product. Lytic transglycosylases (LTs) play an integral role in the metabolism of the peptidoglycan (PG) sacculus. Their lytic action creates space within the PG sacculus to allow for its expansion as well as for the insertion of various structures such as secretion systems and flagella K18691 - - 0.0000000000000000000000000000000000000000000000000004814 187.0
BYD3_k127_8325915_8 - - - - 0.000000000000000000000000000000000000000000000007839 190.0
BYD3_k127_8325915_9 - - - - 0.0000000000000000000000000000000000000001508 166.0
BYD3_k127_8373004_0 Glycosyl hydrolases family 15 - - - 5.35e-206 659.0
BYD3_k127_8373004_1 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009315 387.0
BYD3_k127_8373004_2 Transporter-associated region K03699 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004014 373.0
BYD3_k127_8373004_3 membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001324 274.0
BYD3_k127_8373004_4 NADPH-dependent FMN reductase - - - 0.000000000000000000000000000000000000000000000000000000000006692 212.0
BYD3_k127_8373004_5 A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters K13819 - - 0.00000000000000000000000000000102 128.0
BYD3_k127_8373004_6 NUDIX domain - - - 0.000000000000000000000000001651 117.0
BYD3_k127_8373004_7 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.0000000000000000000008544 102.0
BYD3_k127_8373004_8 repeat protein - - - 0.00000000000000000004018 91.0
BYD3_k127_8450362_0 Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine K12960,K20810 GO:0003674,GO:0003824,GO:0016787,GO:0016810,GO:0016814,GO:0019239,GO:0050270 3.5.4.28,3.5.4.31,3.5.4.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001035 304.0
BYD3_k127_8450362_1 PFAM D-Ala-D-Ala carboxypeptidase 3 (S13) family K07259 - 3.4.16.4 0.0000000000000000000000000000000000000000000000008716 192.0
BYD3_k127_8450362_2 Responsible for removing an oxidatively damaged form of guanine (7,8-dihydro-8-oxoguanine 7-oxoG) from DNA. Also nicks DNA at apurinic apyrimidinic sites (AP sites) K03653 - 4.2.99.18 0.00000000000000000000000000000000000008073 150.0
BYD3_k127_8450362_3 transglycosylase K08309 - - 0.00000000000000000005769 97.0
BYD3_k127_8450362_4 PIN domain - - - 0.000000000000000496 83.0
BYD3_k127_8450362_5 gag-polyprotein putative aspartyl protease - - - 0.0000000001765 74.0
BYD3_k127_8450362_6 COGs COG3547 Transposase and inactivated derivatives - - - 0.00000397 49.0
BYD3_k127_8456306_0 Malic enzyme, NAD binding domain K00027 - 1.1.1.38 3.781e-196 624.0
BYD3_k127_8456306_1 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004504 466.0
BYD3_k127_8456306_2 Protein of unknown function DUF72 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004896 308.0
BYD3_k127_8456306_3 metal-dependent phosphohydrolase 7TM intracellular region K07037 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007015 319.0
BYD3_k127_8456306_4 Transcriptional regulatory protein, C terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002064 284.0
BYD3_k127_8456306_5 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003465 278.0
BYD3_k127_8456306_6 - - - - 0.00000000000000000000000000000000000000007028 154.0
BYD3_k127_8456306_7 TIGRFAM polymorphic outer membrane protein K21449 - - 0.000000000000000000000000000003751 137.0
BYD3_k127_8456306_8 PD-(D/E)XK nuclease superfamily - - - 0.000000000000000000000000003587 115.0
BYD3_k127_8456306_9 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 - 3.4.21.88 0.00000000000000000000007807 106.0
BYD3_k127_8530946_0 cAMP biosynthetic process K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003993 466.0
BYD3_k127_8530946_1 cAMP biosynthetic process K00870,K12132 - 2.7.1.37,2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004781 339.0
BYD3_k127_8597357_0 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003443 341.0
BYD3_k127_8597357_1 PFAM Binding-protein-dependent transport system inner membrane component K02033,K15581,K15585 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002518 338.0
BYD3_k127_8597357_10 Lytic transglycosylase catalytic K08309 - - 0.00000000000000000000000001953 127.0
BYD3_k127_8597357_2 Bacterial extracellular solute-binding proteins, family 5 Middle K15580 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000473 349.0
BYD3_k127_8597357_3 'ABC-type dipeptide oligopeptide nickel transport K02034,K15582 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006012 300.0
BYD3_k127_8597357_4 Multicopper oxidase K22350 - 1.16.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000002607 249.0
BYD3_k127_8597357_5 Belongs to the ABC transporter superfamily K02031,K15583 - - 0.000000000000000000000000000000000000000000000000000000000000002235 220.0
BYD3_k127_8597357_6 Copper binding periplasmic protein CusF K07152 - - 0.0000000000000000000000000000000000000000000000000000000000416 216.0
BYD3_k127_8597357_7 ABC-type oligopeptide transport system, periplasmic component K15580 - - 0.00000000000000000000000000000000000000000000000002933 200.0
BYD3_k127_8597357_8 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 GO:0003674,GO:0003824,GO:0004140,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.1.24 0.000000000000000000000000000000000000000000000009975 181.0
BYD3_k127_8597357_9 PFAM MazG nucleotide pyrophosphohydrolase - - - 0.000000000000000000000000004353 114.0
BYD3_k127_8670918_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000006872 243.0
BYD3_k127_8670918_1 Cellulase N-terminal ig-like domain K01179 - 3.2.1.4 0.0000000000000000000000000000000000000004509 158.0
BYD3_k127_8670918_2 Transcriptional regulatory protein, C terminal - - - 0.000000000000000000000000000000000000003038 168.0
BYD3_k127_8727453_0 PFAM Peptidase family M20 M25 M40 K01436 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001435 579.0
BYD3_k127_8727453_1 Beta-lactamase class C and other penicillin binding K01286 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002111 286.0
BYD3_k127_8727453_2 Belongs to the Dps family K04047 - - 0.000000000000000000000000000000000000000000000000000007379 198.0
BYD3_k127_8727453_3 - - - - 0.000000000000006211 79.0
BYD3_k127_8730468_0 Domain of unknown function DUF87 K06915 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003223 545.0
BYD3_k127_8730468_1 aminopeptidase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001432 490.0
BYD3_k127_8730468_10 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000000000000000000000000000000002558 148.0
BYD3_k127_8730468_11 Domain of unknown function (DUF1906) - - - 0.000000000000000000005139 109.0
BYD3_k127_8730468_12 BlaR1 peptidase M56 - - - 0.00000008702 66.0
BYD3_k127_8730468_2 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005333 373.0
BYD3_k127_8730468_3 TIGRFAM 40-residue YVTN family beta-propeller repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003036 295.0
BYD3_k127_8730468_4 LytTr DNA-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003213 283.0
BYD3_k127_8730468_5 Histidine kinase K08082 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000003631 275.0
BYD3_k127_8730468_6 dextransucrase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000271 272.0
BYD3_k127_8730468_7 Transposase IS200 like K07491 - - 0.0000000000000000000000000000000000000000000000000000001203 198.0
BYD3_k127_8730468_8 chaperone-mediated protein folding - - - 0.000000000000000000000000000000000000000000000001725 197.0
BYD3_k127_8730468_9 Beta-lactamase - - - 0.0000000000000000000000000000000000000000003639 174.0
BYD3_k127_8789177_0 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines K01479,K12255 - 3.5.3.7,3.5.3.8 0.00000000000000000000000000000000000000000000000000000000000000000000003872 251.0
BYD3_k127_8789177_1 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000004994 247.0
BYD3_k127_8789177_2 - - - - 0.00000000000000000000000000000000000000000002161 168.0
BYD3_k127_8789177_4 SpoIIAA-like - - - 0.00000000000000000000000000003309 125.0
BYD3_k127_8789177_5 Citrate transporter K14445 - - 0.00000000000000000000000007076 113.0
BYD3_k127_8791658_0 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K17713 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0008104,GO:0008150,GO:0008152,GO:0009279,GO:0009987,GO:0016020,GO:0016043,GO:0016491,GO:0019867,GO:0022607,GO:0030312,GO:0030313,GO:0031224,GO:0031230,GO:0031241,GO:0031246,GO:0031975,GO:0032991,GO:0033036,GO:0034613,GO:0042802,GO:0043163,GO:0043165,GO:0044085,GO:0044091,GO:0044425,GO:0044462,GO:0044464,GO:0045184,GO:0045229,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0055114,GO:0061024,GO:0070727,GO:0071709,GO:0071840,GO:0071944,GO:0072657,GO:0090150,GO:0098552,GO:0098796,GO:1990063 - 0.00001045 58.0
BYD3_k127_8799859_0 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K00058 - 1.1.1.399,1.1.1.95 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001071 556.0
BYD3_k127_8799859_1 coenzyme binding K07071 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003173 437.0
BYD3_k127_8799859_2 cellulose binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000187 304.0
BYD3_k127_8799859_3 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00658 GO:0003674,GO:0003824,GO:0004148,GO:0005488,GO:0005504,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0008150,GO:0008152,GO:0008289,GO:0009405,GO:0009987,GO:0015036,GO:0016020,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0019725,GO:0030312,GO:0031405,GO:0031406,GO:0032991,GO:0033293,GO:0036094,GO:0040007,GO:0042592,GO:0043167,GO:0043168,GO:0043177,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0045254,GO:0045454,GO:0048037,GO:0050662,GO:0050789,GO:0050794,GO:0051704,GO:0055114,GO:0065007,GO:0065008,GO:0071944,GO:0097159,GO:1901363,GO:1901681,GO:1902494,GO:1990204 2.3.1.61 0.00000000000000000000000000000000000000000000000000000000000000008734 228.0
BYD3_k127_8799859_4 Redoxin - - - 0.0000000000000000000000000000000000000000000000000000004788 208.0
BYD3_k127_8799859_5 Protein of unknown function (DUF4242) - - - 0.00000000000000000000000000000000002056 138.0
BYD3_k127_8799859_6 YjbR - - - 0.0000000000000000000000000001754 120.0
BYD3_k127_8799859_7 - - - - 0.000000000000006484 77.0
BYD3_k127_8799859_8 pyridine nucleotide-disulphide oxidoreductase dimerisation K00382 - 1.8.1.4 0.0000002 52.0
BYD3_k127_8817463_0 PLD-like domain - - - 9.537e-263 818.0
BYD3_k127_8817463_1 Beta-lactamase superfamily domain - - - 0.00000000000000000000000000000000000000000000001842 183.0
BYD3_k127_8817463_2 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000001695 177.0
BYD3_k127_8817463_3 Cupin domain - - - 0.00000000000000000000000000001438 120.0
BYD3_k127_8817463_4 - - - - 0.000000000000000004231 92.0
BYD3_k127_8817463_5 - - - - 0.00001021 56.0
BYD3_k127_8996103_0 pfkB family carbohydrate kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005027 372.0
BYD3_k127_8996103_1 Enoyl-(Acyl carrier protein) reductase K00208 - 1.3.1.10,1.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000237 302.0
BYD3_k127_8996103_2 Possible lysine decarboxylase K06966 - 3.2.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001084 283.0
BYD3_k127_8996103_3 Zn-dependent protease with chaperone function - - - 0.00000000000000000000000000000000000000000000001586 179.0
BYD3_k127_8996103_4 glyoxalase bleomycin resistance protein dioxygenase - - - 0.00000000000000000000000004137 109.0
BYD3_k127_8996103_5 CutA1 divalent ion tolerance protein K03926 GO:0003674,GO:0005488,GO:0005507,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009507,GO:0009536,GO:0009987,GO:0016043,GO:0022607,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043933,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0051259,GO:0051260,GO:0065003,GO:0070206,GO:0070207,GO:0071840 - 0.000000000000000000000006759 104.0
BYD3_k127_9005287_0 Catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia K01426 - 3.5.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008363 564.0
BYD3_k127_9005287_1 SMART Tetratricopeptide - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000468 407.0
BYD3_k127_9005287_2 Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000291 357.0
BYD3_k127_9005287_3 Beta-lactamase superfamily domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001149 325.0
BYD3_k127_9005287_4 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.00000000000000000000000000000000000000000005063 169.0
BYD3_k127_9005287_5 DEAD DEAH box helicase - - - 0.000000000000000000000000000008882 124.0
BYD3_k127_9068841_0 Beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002519 432.0
BYD3_k127_9068841_1 acetyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009803 303.0
BYD3_k127_9068841_2 GTP cyclohydrolase II - - - 0.0000000000000000000000000000000000000000000000000003434 189.0
BYD3_k127_9068841_3 Amino acid permease K03294 - - 0.000000000000002742 78.0
BYD3_k127_934261_0 of the alpha beta superfamily K06889 - - 0.0000000000000000000000000000000000000000000000000000000000000003357 224.0
BYD3_k127_934261_1 Catalyzes the dehydration of chorismate into 3- (1- carboxyvinyl)oxy benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11782 - 4.2.1.151 0.000000000000000000000000000000000000000001443 169.0
BYD3_k127_934261_2 Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2) K11784 - 1.21.98.1 0.00000000000000000000000000000001198 129.0
BYD3_k127_934261_3 Domain of unknown function (DUF1905) - - - 0.0000000000000000000000000006521 121.0
BYD3_k127_964137_0 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004967 553.0
BYD3_k127_964137_1 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 GO:0003674,GO:0003824,GO:0004619,GO:0005488,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016866,GO:0016868,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0030145,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043167,GO:0043169,GO:0043436,GO:0043937,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046537,GO:0046700,GO:0046872,GO:0046914,GO:0046939,GO:0050789,GO:0050793,GO:0051186,GO:0051188,GO:0055086,GO:0065007,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576 5.4.2.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002733 441.0
BYD3_k127_964137_2 Thymidine kinase K00857 - 2.7.1.21 0.00000000000000000000000000000000000000000000000000000000000000002897 228.0
BYD3_k127_964137_3 PFAM S23 ribosomal protein - - - 0.00000000000000000000000000000000000000000000002201 174.0
BYD3_k127_964137_4 - - - - 0.00003896 54.0
BYD3_k127_985674_0 Integral membrane protein TerC family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001503 328.0
BYD3_k127_985674_1 WD40 domain protein beta Propeller K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006727 331.0
BYD3_k127_985674_2 ECF sigma factor - - - 0.00000000000000000000000000000000000000000000001419 177.0
BYD3_k127_985674_3 META domain - - - 0.0000001068 60.0
BYD3_k127_990355_0 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008301 383.0
BYD3_k127_990355_1 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 0.000000000000000000000000000000000000000001181 165.0
BYD3_k127_990355_3 DNA segregation ATPase FtsK SpoIIIE K03466 - - 0.00000002866 59.0