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Overview

ID MAG00144
Name BYD3_bin.7
Sample SMP0003
Taxonomy
Kingdom Bacteria
Phylum Gemmatimonadota
Class Gemmatimonadetes
Order JACCXV01
Family JACCXV01
Genus DATBJZ01
Species
Assembly information
Completeness (%) 82.27
Contamination (%) 0.38
GC content (%) 74.0
N50 (bp) 15,273
Genome size (bp) 2,555,391

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes2080

Gene name Description KEGG GOs EC E-value Score Sequence
BYD3_k127_1015892_0 Pyrimidine nucleoside phosphorylase C-terminal domain K00756 GO:0003674,GO:0003824,GO:0004645,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0009032,GO:0016740,GO:0016757,GO:0016758,GO:0016763,GO:0044424,GO:0044444,GO:0044464 2.4.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009413 412.0
BYD3_k127_1015892_1 NmrA-like family - - - 0.0000000000000000000000000000000000000000000000000000000000000000003744 251.0
BYD3_k127_1015892_2 Methionine biosynthesis protein MetW - - - 0.0000000000000000000000000000000000000000009298 179.0
BYD3_k127_1015892_3 Tetratricopeptide repeat - - - 0.0000000000000000000000000000003743 136.0
BYD3_k127_1015892_4 Methylase involved in ubiquinone menaquinone biosynthesis - - - 0.000000000001683 76.0
BYD3_k127_104456_0 Enoyl-(Acyl carrier protein) reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006014 310.0
BYD3_k127_104456_1 3-demethylubiquinone-9 3-O-methyltransferase activity - - - 0.0000000000000000005106 98.0
BYD3_k127_104456_2 - - - - 0.0000003021 61.0
BYD3_k127_104456_3 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) - - - 0.0000004783 61.0
BYD3_k127_1113357_0 Elongation factor G, domain IV K02355 - - 1.107e-236 752.0
BYD3_k127_1113357_1 PFAM OPT oligopeptide transporter protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006361 561.0
BYD3_k127_1113357_10 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000434 278.0
BYD3_k127_1113357_11 Belongs to the RNA methyltransferase TrmD family K00554 GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050518,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.228 0.00000000000000000000000000000000000000000000000000000000000000000002597 249.0
BYD3_k127_1113357_12 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA K03500 - 2.1.1.176 0.00000000000000000000000000000000000000000000000000000000009821 230.0
BYD3_k127_1113357_13 - - - - 0.000000000000000000000000000000000000000000000000000374 199.0
BYD3_k127_1113357_14 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.0000000000000000000000000000000000000000000133 176.0
BYD3_k127_1113357_15 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.000000000000000000000000000000000000003666 154.0
BYD3_k127_1113357_16 3-demethylubiquinone-9 3-methyltransferase - - - 0.0000000000000000000000000000000000001377 144.0
BYD3_k127_1113357_17 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 GO:0000725,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008821,GO:0009058,GO:0009059,GO:0009987,GO:0016787,GO:0016788,GO:0016889,GO:0016894,GO:0031297,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0045005,GO:0046483,GO:0048476,GO:0050896,GO:0051716,GO:0071704,GO:0071932,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901576 3.1.22.4 0.0000000000000000000000000000000000002622 148.0
BYD3_k127_1113357_18 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 - 2.5.1.3 0.00000000000000000000000000000000003182 146.0
BYD3_k127_1113357_19 ubiE/COQ5 methyltransferase family - - - 0.000000000000000000000000000006659 130.0
BYD3_k127_1113357_2 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY K03106 - 3.6.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005185 477.0
BYD3_k127_1113357_20 Belongs to the bacterial ribosomal protein bS16 family K02959 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000003644 117.0
BYD3_k127_1113357_21 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 GO:0008150,GO:0040007 - 0.0000000000000000000000003732 112.0
BYD3_k127_1113357_22 TIGRFAM preprotein translocase, YajC subunit K03210 - - 0.0000000000000000000002758 101.0
BYD3_k127_1113357_23 3-demethylubiquinone-9 3-methyltransferase - - - 0.000000000000000000003568 98.0
BYD3_k127_1113357_24 - - - - 0.00000000000000000006381 91.0
BYD3_k127_1113357_25 serine threonine protein kinase K08884,K12132 GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010565,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018107,GO:0018193,GO:0018210,GO:0019216,GO:0019217,GO:0019222,GO:0019538,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0036211,GO:0042304,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0045717,GO:0045833,GO:0045922,GO:0046777,GO:0046890,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051055,GO:0062012,GO:0062014,GO:0065007,GO:0071704,GO:0071944,GO:0080090,GO:0140096,GO:1901564 2.7.11.1 0.00000000000002267 83.0
BYD3_k127_1113357_26 Protein of unknown function (DUF2905) - - - 0.000000005254 61.0
BYD3_k127_1113357_27 Thiamine biosynthesis protein ThiS K03154 - - 0.00001278 57.0
BYD3_k127_1113357_28 SnoaL-like polyketide cyclase - - - 0.00003364 46.0
BYD3_k127_1113357_3 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003031 421.0
BYD3_k127_1113357_4 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003092 410.0
BYD3_k127_1113357_5 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007657 397.0
BYD3_k127_1113357_6 short-chain dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005363 382.0
BYD3_k127_1113357_7 transcriptional regulatory protein - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001405 303.0
BYD3_k127_1113357_8 Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S K03149 GO:0003674,GO:0003824,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.8.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001114 305.0
BYD3_k127_1113357_9 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 - 2.1.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003748 288.0
BYD3_k127_1124435_0 ATP-dependent helicase nuclease subunit A K16898 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007556 491.0
BYD3_k127_1124435_1 exonuclease activity K16899 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000009417 278.0
BYD3_k127_1124435_2 Protein of unknown function (DUF1565) - - - 0.00000000000466 79.0
BYD3_k127_114521_0 Multicopper oxidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000079 426.0
BYD3_k127_114521_1 PFAM multicopper oxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001432 290.0
BYD3_k127_114521_3 SCO1/SenC K07152 - - 0.00000000000000000000000000000001838 140.0
BYD3_k127_1171036_0 Type II/IV secretion system protein K02669 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003336 384.0
BYD3_k127_1171036_1 Eukaryotic DNA topoisomerase I, catalytic core K03168 - 5.99.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001239 383.0
BYD3_k127_1171036_2 DNA polymerase Ligase (LigD) K01971 - 6.5.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000001271 259.0
BYD3_k127_1171036_3 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.0000000000000000000000000000000000000000000000000001548 199.0
BYD3_k127_1171036_4 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis K00759 GO:0003674,GO:0003824,GO:0003999,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006144,GO:0006168,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009113,GO:0009987,GO:0016020,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0034641,GO:0034654,GO:0042440,GO:0043094,GO:0043096,GO:0043101,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044464,GO:0046083,GO:0046084,GO:0046112,GO:0046148,GO:0046483,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.4.2.7 0.000000000000000000000000000000000000000000000003087 186.0
BYD3_k127_1171036_5 Pyridine nucleotide-disulphide oxidoreductase K00384 - 1.8.1.9 0.00000000000000000000000000000000001224 156.0
BYD3_k127_1171036_6 Phage tail tape measure protein, TP901 family - - - 0.000000000000000000000000000009824 125.0
BYD3_k127_1171036_7 UPF0056 membrane protein K05595 - - 0.00000000000000000000000000002682 125.0
BYD3_k127_1171036_8 Tetratricopeptide repeat - - - 0.000000000000000003752 99.0
BYD3_k127_1171036_9 Belongs to the acylphosphatase family K01512 - 3.6.1.7 0.00000000000000001233 87.0
BYD3_k127_1206141_0 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 4.107e-274 896.0
BYD3_k127_1206141_1 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 3.064e-266 831.0
BYD3_k127_1206141_10 two component, sigma54 specific, transcriptional regulator, Fis family K02481,K07713 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003417 419.0
BYD3_k127_1206141_11 Belongs to the D-alanine--D-alanine ligase family K01921,K01955 - 6.3.2.4,6.3.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003116 372.0
BYD3_k127_1206141_12 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001235 344.0
BYD3_k127_1206141_13 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006076 315.0
BYD3_k127_1206141_14 Ribulose-phosphate 3 epimerase family K01783 - 5.1.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004456 311.0
BYD3_k127_1206141_15 Belongs to the peptidase S8 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002537 312.0
BYD3_k127_1206141_16 ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity K06048 - - 0.00000000000000000000000000000000000000000000000000000000000000000002834 247.0
BYD3_k127_1206141_17 Esterase PHB depolymerase K03932 - - 0.000000000000000000000000000000000000000000000000000000000002762 229.0
BYD3_k127_1206141_18 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000004509 209.0
BYD3_k127_1206141_19 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000013 201.0
BYD3_k127_1206141_2 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008814 587.0
BYD3_k127_1206141_20 Belongs to the glycerate kinase type-1 family K00865 - 2.7.1.165 0.000000000000000000000000000000000000000000000122 192.0
BYD3_k127_1206141_21 PFAM ATP-binding region ATPase domain protein K07709 - 2.7.13.3 0.000000000000000000000000000000000000000000003889 188.0
BYD3_k127_1206141_22 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04565 GO:0000302,GO:0000303,GO:0000305,GO:0003674,GO:0003824,GO:0004784,GO:0005488,GO:0005507,GO:0005575,GO:0005576,GO:0005615,GO:0005623,GO:0006801,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0008270,GO:0009636,GO:0009987,GO:0010035,GO:0016209,GO:0016491,GO:0016721,GO:0019430,GO:0030288,GO:0030313,GO:0031975,GO:0033554,GO:0034599,GO:0034614,GO:0042221,GO:0042597,GO:0043167,GO:0043169,GO:0044237,GO:0044421,GO:0044464,GO:0046872,GO:0046914,GO:0050896,GO:0051716,GO:0055114,GO:0070887,GO:0071450,GO:0071451,GO:0072593,GO:0097237,GO:0098754,GO:0098869,GO:1901700,GO:1901701,GO:1990748 1.15.1.1 0.00000000000000000000000000000000000000000001493 179.0
BYD3_k127_1206141_23 TIGRFAM lipopolysaccharide heptosyltransferase II K02843 - - 0.00000000000000000000000000000000000000000007367 175.0
BYD3_k127_1206141_24 Cupin 2, conserved barrel domain protein - - - 0.000000000000000000000000000000000000000001312 162.0
BYD3_k127_1206141_25 Laminin G domain - - - 0.0000000000000000000000000000000000007987 159.0
BYD3_k127_1206141_26 FtsX-like permease family - - - 0.00000000000000000000000000000001474 145.0
BYD3_k127_1206141_27 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 - 2.1.2.9 0.00000000000000000000000000000394 133.0
BYD3_k127_1206141_28 Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway - - - 0.0000000000000000000000000008388 131.0
BYD3_k127_1206141_29 PFAM Ribonuclease BN-like family K07058 - - 0.000000000000000000000000001643 126.0
BYD3_k127_1206141_3 PFAM UDP-glucose GDP-mannose dehydrogenase K13015 - 1.1.1.136 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002371 561.0
BYD3_k127_1206141_30 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.000000000000000000000000004147 121.0
BYD3_k127_1206141_31 cheY-homologous receiver domain - - - 0.000000000000000000000007712 106.0
BYD3_k127_1206141_32 GAF domain - - - 0.0000000000000000000001728 114.0
BYD3_k127_1206141_33 Cytochrome c - - - 0.00000000000002433 81.0
BYD3_k127_1206141_34 oxidoreductase activity - - - 0.0000000004463 73.0
BYD3_k127_1206141_35 - - - - 0.000000003523 69.0
BYD3_k127_1206141_36 COG2931 RTX toxins and related Ca2 -binding proteins - - - 0.00000001022 69.0
BYD3_k127_1206141_37 peptidase activity, acting on L-amino acid peptides K14647,K20276,K21449 - - 0.00000002965 65.0
BYD3_k127_1206141_38 response regulator - - - 0.00006635 55.0
BYD3_k127_1206141_4 Glucose / Sorbosone dehydrogenase K21430 GO:0003674,GO:0003824,GO:0005488,GO:0005509,GO:0005575,GO:0005623,GO:0008150,GO:0008152,GO:0016491,GO:0016614,GO:0016901,GO:0019842,GO:0030288,GO:0030313,GO:0031406,GO:0031975,GO:0036094,GO:0042597,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0044464,GO:0046872,GO:0048037,GO:0048038,GO:0055114,GO:0070968,GO:0097159,GO:1901363 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003473 533.0
BYD3_k127_1206141_5 CarboxypepD_reg-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009351 548.0
BYD3_k127_1206141_6 alpha-L-arabinofuranosidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003506 465.0
BYD3_k127_1206141_7 uridine kinase K00855 - 2.7.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005143 428.0
BYD3_k127_1206141_8 Protein of unknown function (DUF1326) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002234 394.0
BYD3_k127_1206141_9 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004778 396.0
BYD3_k127_1219667_0 response to heat K03694,K03695 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0030312,GO:0040007,GO:0044464,GO:0071944 - 0.0 1109.0
BYD3_k127_1219667_1 ABC transporter K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000019 403.0
BYD3_k127_1219667_2 - K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005 327.0
BYD3_k127_1219667_3 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source K01916 - 6.3.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000003161 261.0
BYD3_k127_1219667_4 - - - - 0.00000000000000000000000000000000000000000000000008551 184.0
BYD3_k127_1219667_5 helix_turn_helix gluconate operon transcriptional repressor K07979 - - 0.00000000000000000000000000000000000000000000004966 172.0
BYD3_k127_1219667_6 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase - - - 0.00000000000000000000000000000000000000000000008033 181.0
BYD3_k127_1219667_7 Thioredoxin K03671 - - 0.0000000000000000000000000000000001775 134.0
BYD3_k127_1219667_8 B12 binding domain K01849 - 5.4.99.2 0.000000000000000000000000000000001739 136.0
BYD3_k127_1219667_9 - - - - 0.000000000000000002205 98.0
BYD3_k127_1281313_0 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 - 1.9.3.1 1.136e-252 795.0
BYD3_k127_1281313_1 Diguanylate cyclase phosphodiesterase with PAS PAC - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007574 537.0
BYD3_k127_1281313_10 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000008527 97.0
BYD3_k127_1281313_11 Prokaryotic Cytochrome C oxidase subunit IV K02277 - 1.9.3.1 0.0000000000001532 76.0
BYD3_k127_1281313_12 COG1309 Transcriptional regulator - - - 0.00000000002507 72.0
BYD3_k127_1281313_13 - - - - 0.00003895 53.0
BYD3_k127_1281313_14 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K01485,K11991 GO:0002097,GO:0002100,GO:0006139,GO:0006382,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016553,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 3.5.4.1,3.5.4.33 0.00006729 48.0
BYD3_k127_1281313_2 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.00000000000000000000000000000000000000000000000000000000000000000000000000001584 287.0
BYD3_k127_1281313_3 Cytochrome c oxidase subunit III K02276,K02299 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000339 254.0
BYD3_k127_1281313_4 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000006811 246.0
BYD3_k127_1281313_5 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000005998 248.0
BYD3_k127_1281313_6 Pfam Polysulphide reductase, NrfD - - - 0.0000000000000000000000000000000000000000000000000001608 203.0
BYD3_k127_1281313_7 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.000000000000000000000000000003451 138.0
BYD3_k127_1281313_8 Belongs to the sigma-70 factor family. ECF subfamily K03088 GO:0000988,GO:0000990,GO:0003674,GO:0005575,GO:0005618,GO:0005623,GO:0006355,GO:0006950,GO:0006979,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010468,GO:0010556,GO:0016987,GO:0019219,GO:0019222,GO:0030312,GO:0031323,GO:0031326,GO:0033554,GO:0034605,GO:0043254,GO:0044087,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051171,GO:0051252,GO:0051409,GO:0051716,GO:0060255,GO:0065007,GO:0071944,GO:0080090,GO:0140110,GO:1903506,GO:2000112,GO:2000142,GO:2001141 - 0.000000000000000000000002317 110.0
BYD3_k127_1281313_9 cytochrome c oxidase subunit II K02275 - 1.9.3.1 0.0000000000000000002704 104.0
BYD3_k127_1392945_0 Heat shock 70 kDa protein K04043 - - 7.285e-298 927.0
BYD3_k127_1392945_1 Belongs to the aldehyde dehydrogenase family K00128 - 1.2.1.3 9.535e-234 752.0
BYD3_k127_1392945_2 Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate K01619 - 4.1.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001517 358.0
BYD3_k127_1392945_3 Trypsin K04771 - 3.4.21.107 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002169 353.0
BYD3_k127_1392945_4 Aldehyde dehydrogenase family K00128 - 1.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001355 295.0
BYD3_k127_1392945_5 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007058 282.0
BYD3_k127_1392945_6 Phosphomethylpyrimidine kinase K00941 - 2.7.1.49,2.7.4.7 0.0000000000000000000000000000000000000000000000000000000000000000000000007968 254.0
BYD3_k127_1392945_7 PFAM peptidase M48 Ste24p - - - 0.00000000000000000000000000000000000000000000000000000000000001778 225.0
BYD3_k127_1416246_0 Involved in the tonB-independent uptake of proteins - - - 1.041e-203 676.0
BYD3_k127_1416246_1 Vacuole effluxer Atg22 like K06902 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001366 437.0
BYD3_k127_1416246_10 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000002381 171.0
BYD3_k127_1416246_11 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 GO:0003674,GO:0003824,GO:0004045,GO:0016787,GO:0016788,GO:0052689,GO:0140098,GO:0140101 3.1.1.29 0.000000000000000000000000000000000000000000275 174.0
BYD3_k127_1416246_12 PFAM conserved K07027 - - 0.000000000000000000000000000000000000000001451 170.0
BYD3_k127_1416246_13 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237,GO:0050515 2.7.1.148 0.0000000000000000000000000000000000000005194 169.0
BYD3_k127_1416246_14 Protein of unknown function DUF45 K07043 - - 0.000000000000000000000000000000000001014 160.0
BYD3_k127_1416246_15 Cytochrome c - - - 0.0000000000000000000000000000003251 134.0
BYD3_k127_1416246_16 COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily - - - 0.00000000000000000000000000000038 140.0
BYD3_k127_1416246_17 Binds to the 23S rRNA K02939 - - 0.000000000000000000000000000001652 139.0
BYD3_k127_1416246_18 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.00000000000000000000000000002418 122.0
BYD3_k127_1416246_19 SURF1 family K14998 - - 0.00000000000000000000006776 113.0
BYD3_k127_1416246_2 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001989 393.0
BYD3_k127_1416246_20 rRNA binding K02963 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0019843,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0048027,GO:0070181,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000003039 93.0
BYD3_k127_1416246_21 redox protein regulator of disulfide bond formation K07397 - - 0.0000000000000000002211 94.0
BYD3_k127_1416246_22 Binds together with S18 to 16S ribosomal RNA K02990 - - 0.00000000000000008766 85.0
BYD3_k127_1416246_23 membrane protein (DUF2232) - - - 0.00008852 54.0
BYD3_k127_1416246_24 G-rich domain on putative tyrosine kinase K16554,K16692 GO:0000271,GO:0003674,GO:0003824,GO:0004672,GO:0004713,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0005975,GO:0005976,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009242,GO:0009987,GO:0016020,GO:0016021,GO:0016051,GO:0016301,GO:0016310,GO:0016462,GO:0016740,GO:0016772,GO:0016773,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0018108,GO:0018193,GO:0018212,GO:0019538,GO:0031224,GO:0031226,GO:0033692,GO:0034637,GO:0034645,GO:0036211,GO:0038083,GO:0042802,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044267,GO:0044425,GO:0044459,GO:0044464,GO:0046377,GO:0046777,GO:0071704,GO:0071944,GO:0140096,GO:1901135,GO:1901137,GO:1901564,GO:1901576 - 0.0006617 51.0
BYD3_k127_1416246_25 Domain of unknown function (DUF2520) - - - 0.0009972 48.0
BYD3_k127_1416246_3 DinB superfamily K18912 - 1.14.99.50 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005935 421.0
BYD3_k127_1416246_4 PFAM peptidase T2 asparaginase 2 K01444,K13051 - 3.4.19.5,3.5.1.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003958 372.0
BYD3_k127_1416246_5 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K03307 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006182 338.0
BYD3_k127_1416246_6 Histidine-specific methyltransferase, SAM-dependent K18911 - 2.1.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000007457 278.0
BYD3_k127_1416246_7 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008614,GO:0008615,GO:0009058,GO:0009110,GO:0009987,GO:0016740,GO:0016769,GO:0017144,GO:0018130,GO:0019438,GO:0033856,GO:0034641,GO:0042364,GO:0042816,GO:0042819,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072524,GO:0072525,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 2.6.99.2 0.000000000000000000000000000000000000000000000000000000000000000003702 241.0
BYD3_k127_1416246_8 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000007212 252.0
BYD3_k127_1416246_9 PFAM Metal-dependent phosphohydrolase, HD K09163 - - 0.0000000000000000000000000000000000000000000000000000000000000000594 233.0
BYD3_k127_1484917_0 Clp amino terminal domain, pathogenicity island component K03696 - - 0.0 1139.0
BYD3_k127_1484917_1 type II secretion system protein E K02283 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001101 539.0
BYD3_k127_1484917_10 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 GO:0003674,GO:0003824,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016740,GO:0016746,GO:0016747,GO:0019637,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.3.1.191 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005289 286.0
BYD3_k127_1484917_11 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.000000000000000000000000000000000000000000000000000000000000000000000000001025 281.0
BYD3_k127_1484917_12 Part of the ABC transporter complex LolCDE involved in the translocation of K09810 - - 0.00000000000000000000000000000000000000000000000000000000000000000000002889 248.0
BYD3_k127_1484917_13 Belongs to the pseudouridine synthase RsuA family K06178,K06183 - 5.4.99.19,5.4.99.22 0.000000000000000000000000000000000000000000000000000000000000004779 231.0
BYD3_k127_1484917_14 Type II secretion system K12511 - - 0.0000000000000000000000000000000000000000000000000000002555 216.0
BYD3_k127_1484917_15 Type II secretion system (T2SS), protein F K12510 - - 0.000000000000000000000000000000000000000000000000000001013 205.0
BYD3_k127_1484917_16 - - - - 0.000000000000000000000000000000000000000000001415 183.0
BYD3_k127_1484917_17 PFAM peptidase M50 - - - 0.000000000000000000000000000000000000000000005377 172.0
BYD3_k127_1484917_18 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.000000000000000000000000000000000000000000009157 182.0
BYD3_k127_1484917_19 Flp pilus assembly protein, ATPase CpaE K02282 - - 0.0000000000000000000000000000000000000001335 173.0
BYD3_k127_1484917_2 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006626 518.0
BYD3_k127_1484917_20 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 GO:0003674,GO:0005488,GO:0005515,GO:0042802 - 0.0000000000000000000000000000000000004094 159.0
BYD3_k127_1484917_21 UvrB/uvrC motif K19411 - - 0.00000000000000000000000000001059 134.0
BYD3_k127_1484917_22 Putative Flp pilus-assembly TadE/G-like - - - 0.000000000000000000000001151 118.0
BYD3_k127_1484917_23 Uncharacterized ACR, COG1430 K09005 - - 0.00000000000000005215 89.0
BYD3_k127_1484917_24 - - - - 0.0000000000000007725 91.0
BYD3_k127_1484917_25 unfolded protein binding K06142 - - 0.00000000000005383 87.0
BYD3_k127_1484917_26 Binds directly to 16S ribosomal RNA K02968 - - 0.00000000001515 68.0
BYD3_k127_1484917_3 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K16363 - 3.5.1.108,4.2.1.59 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001829 447.0
BYD3_k127_1484917_4 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 GO:0003674,GO:0003676,GO:0003723,GO:0003747,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0016149,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001074 415.0
BYD3_k127_1484917_5 ATPase with chaperone activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003678 414.0
BYD3_k127_1484917_6 Surface antigen K07277 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001609 407.0
BYD3_k127_1484917_7 Tryptophanyl-tRNA synthetase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008739 360.0
BYD3_k127_1484917_8 ATP:guanido phosphotransferase, C-terminal catalytic domain K19405 - 2.7.14.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000014 336.0
BYD3_k127_1484917_9 MacB-like periplasmic core domain K09808 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003557 337.0
BYD3_k127_1501843_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 2.321e-222 741.0
BYD3_k127_1501843_1 Sodium:sulfate symporter transmembrane region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004882 471.0
BYD3_k127_1501843_2 PFAM outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000001044 199.0
BYD3_k127_1501843_3 Catalyzes the dehydration of chorismate into 3- (1- carboxyvinyl)oxy benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11782 - 4.2.1.151 0.0000000000000000000000000000000000000000009209 177.0
BYD3_k127_1501843_4 Methyltransferase domain protein - - - 0.00000000000000000000000000000000000000006037 175.0
BYD3_k127_1501843_5 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.0000000000000000000000000000000000000002134 170.0
BYD3_k127_1501843_6 Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000000000009443 133.0
BYD3_k127_1501843_7 chromate transporter K07240 - - 0.000000000000000000000001386 106.0
BYD3_k127_1501843_8 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.0000000000000000000001609 104.0
BYD3_k127_1501843_9 Putative auto-transporter adhesin, head GIN domain - - - 0.00000000000000004077 92.0
BYD3_k127_1533046_0 efflux transmembrane transporter activity K02004 - - 6.675e-196 639.0
BYD3_k127_1533046_1 efflux transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002635 591.0
BYD3_k127_1533046_2 efflux transmembrane transporter activity K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006991 576.0
BYD3_k127_1533046_3 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004262 569.0
BYD3_k127_1533046_4 Serine threonine protein kinase - - - 0.000000000000000000000000000000000000000000000000000000004119 225.0
BYD3_k127_1533046_5 DNA-templated transcription, initiation K03088 - - 0.00000000000000000000000000000000000000000000000000000001207 209.0
BYD3_k127_1533046_6 Putative lumazine-binding - - - 0.0000000000000000000000000000000000000009216 153.0
BYD3_k127_1533046_8 efflux transmembrane transporter activity - - - 0.00000000001892 65.0
BYD3_k127_1549141_0 PFAM regulator of chromosome condensation, RCC1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002397 293.0
BYD3_k127_1549141_1 Responsible for synthesis of pseudouridine from uracil K06177,K06180 GO:0000027,GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022607,GO:0022613,GO:0022618,GO:0031118,GO:0034470,GO:0034622,GO:0034641,GO:0034660,GO:0042254,GO:0042255,GO:0042273,GO:0043170,GO:0043412,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:1901360 5.4.99.23,5.4.99.28,5.4.99.29 0.000000000000000000000000000000000000000000000000000000000000000000003905 247.0
BYD3_k127_1549141_2 Domain of unknown function (DUF4388) - - - 0.000000000000000000000000000000000000000000000000000000000000003679 244.0
BYD3_k127_1549141_3 Tetratricopeptide repeat - - - 0.000000000000000000000000000001293 139.0
BYD3_k127_1549141_4 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 - - 0.000000000000000000000000005291 126.0
BYD3_k127_1549141_5 - - - - 0.00000000000000000000000065 121.0
BYD3_k127_1549141_6 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.00000000000005627 72.0
BYD3_k127_1562935_0 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle K01595 - 4.1.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002601 376.0
BYD3_k127_1562935_1 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 - 2.3.1.234 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002776 335.0
BYD3_k127_1562935_10 5'-nucleotidase, C-terminal domain - - - 0.00004521 54.0
BYD3_k127_1562935_2 Pyruvoyl-dependent arginine decarboxylase (PvlArgDC) K02626 - 4.1.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000006161 259.0
BYD3_k127_1562935_3 Long-chain fatty acid--CoA ligase K01897 - 6.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000002705 270.0
BYD3_k127_1562935_4 Arginase family K01480 - 3.5.3.11 0.000000000000000000000000000000000000000000000000000000000000000000000005443 254.0
BYD3_k127_1562935_5 Glyoxalase bleomycin resistance protein dioxygenase K06991 - - 0.00000000000000000000000000000000000000000000000005713 188.0
BYD3_k127_1562935_6 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K02199 - - 0.0000000000000000000000000006183 122.0
BYD3_k127_1562935_7 synthase K08097 - 4.4.1.19 0.000000000000000003097 91.0
BYD3_k127_1562935_8 5'-nucleotidase, C-terminal domain K11751 - 3.1.3.5,3.6.1.45 0.00000000000000003152 96.0
BYD3_k127_1562935_9 YbbR-like protein - - - 0.000000001236 70.0
BYD3_k127_1618159_0 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008953 620.0
BYD3_k127_1618159_1 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 GO:0001676,GO:0003674,GO:0003676,GO:0003677,GO:0003723,GO:0003729,GO:0003824,GO:0003989,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006417,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008270,GO:0008610,GO:0009058,GO:0009317,GO:0009329,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0016053,GO:0016421,GO:0016874,GO:0016885,GO:0017148,GO:0019222,GO:0019752,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032787,GO:0032991,GO:0034248,GO:0034249,GO:0042759,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046872,GO:0046914,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0071704,GO:0072330,GO:0080090,GO:0097159,GO:1901363,GO:1901576,GO:1902494,GO:1990234,GO:2000112,GO:2000113 2.1.3.15,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004437 339.0
BYD3_k127_1618159_2 Histidyl-tRNA synthetase K01892 - 6.1.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002708 306.0
BYD3_k127_1618159_3 Mur ligase middle domain K11754 - 6.3.2.12,6.3.2.17 0.000000000000000000000000000000000000000000000000000000003856 226.0
BYD3_k127_1618159_4 HNH endonuclease - - - 0.00000000000000000000000000000000000001131 155.0
BYD3_k127_1618159_5 Ribosomal-protein-alanine acetyltransferase K03789 - 2.3.1.128 0.0000000000000000000000000006379 122.0
BYD3_k127_1618159_6 Evidence 5 No homology to any previously reported sequences K03643 GO:0001530,GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0006810,GO:0006869,GO:0008150,GO:0008289,GO:0009279,GO:0009987,GO:0010876,GO:0015920,GO:0016020,GO:0016043,GO:0019867,GO:0022607,GO:0030312,GO:0030313,GO:0031975,GO:0033036,GO:0043163,GO:0043165,GO:0044085,GO:0044091,GO:0044462,GO:0044464,GO:0045229,GO:0051179,GO:0051234,GO:0061024,GO:0071702,GO:0071709,GO:0071840,GO:0071944,GO:0097367,GO:1901264 - 0.000000000001405 79.0
BYD3_k127_1632981_0 Belongs to the HAD-like hydrolase superfamily K02566 - - 0.00000000000000000000000000000000000000000000000009057 190.0
BYD3_k127_1632981_1 protein kinase activity K12132 - 2.7.11.1 0.00000000000000000000000000000000000000002772 176.0
BYD3_k127_1632981_2 Carboxylesterase family - - - 0.0000000000000000000000000000000000000006838 162.0
BYD3_k127_1632981_3 alpha/beta hydrolase fold - - - 0.0000000000000000000000000000000000004206 161.0
BYD3_k127_1632981_4 protein kinase activity K12132 - 2.7.11.1 0.000000000000000000000000000117 129.0
BYD3_k127_1632981_5 Protease prsW family - - - 0.0000000000000001303 94.0
BYD3_k127_1658853_0 Citrate transporter - - - 4.782e-208 662.0
BYD3_k127_1658853_1 PFAM peptidase S9 prolyl oligopeptidase active site domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001784 510.0
BYD3_k127_1658853_2 ABC1 family K03688 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000179 295.0
BYD3_k127_1658853_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000087 235.0
BYD3_k127_1666563_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 1.172e-281 909.0
BYD3_k127_1666563_1 single-stranded-DNA-specific exonuclease RecJ K07462 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001172 466.0
BYD3_k127_1666563_2 Aminotransferase class I and II K00812,K10907 - 2.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000249 350.0
BYD3_k127_1666563_3 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 GO:0003674,GO:0003824,GO:0004595,GO:0005488,GO:0005515,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.7.3 0.000000000000000000000000000000000000000000000003609 188.0
BYD3_k127_1666563_4 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.000000000000000000000000000000000000000001415 178.0
BYD3_k127_1666563_5 Ribonuclease H K03469 - 3.1.26.4 0.0000000000000000000000001654 119.0
BYD3_k127_1666563_6 Conserved hypothetical protein 95 - - - 0.000000000000000000000000521 122.0
BYD3_k127_1666563_7 C4-type zinc ribbon domain K07164 - - 0.0000000000001128 81.0
BYD3_k127_1672342_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 4.256e-282 895.0
BYD3_k127_1672342_1 PDZ domain (Also known as DHR or GLGF) K08372 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003355 400.0
BYD3_k127_1672342_10 Zn-finger in ubiquitin-hydrolases and other protein - - - 0.000000000000000000000000000000004637 145.0
BYD3_k127_1672342_11 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0043021,GO:0043022,GO:0044424,GO:0044444,GO:0044464,GO:0044877 - 0.000000000000000000000000000001178 123.0
BYD3_k127_1672342_12 cellular response to DNA damage stimulus K07340 - - 0.0000000000000000000000007215 110.0
BYD3_k127_1672342_13 transferase activity, transferring glycosyl groups K20444 - - 0.0000000000000000000001838 113.0
BYD3_k127_1672342_14 transferase activity, transferring glycosyl groups K20444 - - 0.0000000000000000000008535 112.0
BYD3_k127_1672342_15 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000000000002181 95.0
BYD3_k127_1672342_16 - - GO:0007610,GO:0007635,GO:0008150,GO:0042048,GO:0042221,GO:0050896 - 0.000000000000004266 77.0
BYD3_k127_1672342_17 Acetyltransferase (GNAT) domain - - - 0.000000003807 64.0
BYD3_k127_1672342_18 Belongs to the peptidase S8 family K08651,K14743 - 3.4.21.66 0.0000001543 62.0
BYD3_k127_1672342_2 prohibitin homologues - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004058 374.0
BYD3_k127_1672342_3 FRG - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003303 339.0
BYD3_k127_1672342_4 Oxidoreductase molybdopterin binding domain K07147 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003289 307.0
BYD3_k127_1672342_5 COG0616 Periplasmic serine proteases (ClpP class) K04773 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005974 302.0
BYD3_k127_1672342_6 Peptidase S8 and S53 subtilisin kexin sedolisin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000646 281.0
BYD3_k127_1672342_7 Nitroreductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000007303 262.0
BYD3_k127_1672342_8 glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) activity K00134,K00150,K03340 - 1.2.1.12,1.2.1.59,1.4.1.16 0.000000000000000000000000000000000000000000000000000000000000001462 244.0
BYD3_k127_1672342_9 OsmC-like protein K04063 - - 0.000000000000000000000000000000000000000000008541 173.0
BYD3_k127_1693064_0 Phospholipase D Active site motif K01115 - 3.1.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009655 379.0
BYD3_k127_1693064_1 COG1131 ABC-type multidrug transport system, ATPase component K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000009281 299.0
BYD3_k127_1693064_2 Transport permease protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000003773 221.0
BYD3_k127_1693064_3 Peptidase family M48 - - - 0.0000000000000000000000000000000000000000233 173.0
BYD3_k127_1693064_4 M61 glycyl aminopeptidase - - - 0.00000000000001079 89.0
BYD3_k127_1693064_5 PhoQ Sensor - - - 0.00000000000004318 84.0
BYD3_k127_1693064_6 Dodecin K09165 - - 0.000002203 59.0
BYD3_k127_1693064_7 dephospho-CoA kinase activity - - - 0.000002886 57.0
BYD3_k127_1693064_8 protein phosphatase 2C domain protein - - - 0.0001466 53.0
BYD3_k127_1802216_0 Participates in both transcription termination and antitermination K02600 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008934 392.0
BYD3_k127_1802216_1 Mechanosensitive ion channel K16052 - - 0.0000000000000000000000000000000000000000000000000000000001273 218.0
BYD3_k127_1802216_2 Required for maturation of 30S ribosomal subunits K09748 - - 0.00000000000000000006669 98.0
BYD3_k127_1802216_3 Belongs to the multicopper oxidase YfiH RL5 family K05810 GO:0003674,GO:0005488,GO:0005507,GO:0043167,GO:0043169,GO:0046872,GO:0046914 - 0.0000000000000000003924 102.0
BYD3_k127_1802216_4 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 0.00004338 53.0
BYD3_k127_1802216_5 ribosomal protein - - - 0.0002412 49.0
BYD3_k127_1966837_0 glycogen phosphorylase activity K00688,K00691 - 2.4.1.1,2.4.1.8 2.326e-227 726.0
BYD3_k127_1966837_1 Response regulator receiver - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001377 610.0
BYD3_k127_1966837_2 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004805 508.0
BYD3_k127_1966837_3 Bacterial protein of unknown function (DUF899) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001073 420.0
BYD3_k127_1966837_4 membrane - - - 0.0000000000000000000000000000000000000000000005313 183.0
BYD3_k127_1966837_5 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 0.00000000000000000000000000000000000000000007391 163.0
BYD3_k127_1966837_6 Outer membrane efflux protein K12340 - - 0.0000000001753 74.0
BYD3_k127_1966837_7 Belongs to the Glu Leu Phe Val dehydrogenases family K00261 - 1.4.1.3 0.00000002679 66.0
BYD3_k127_2015660_0 signal sequence binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004388 421.0
BYD3_k127_2015660_1 ABC-type polysaccharide polyol phosphate transport system ATPase component K09691 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007494 389.0
BYD3_k127_2015660_10 Protein of unknown function (DUF3568) - - - 0.00000000000000001078 89.0
BYD3_k127_2015660_11 transferase activity, transferring glycosyl groups K07011,K13659 - 2.4.1.264 0.0000000000000003029 92.0
BYD3_k127_2015660_12 Glycosyl transferases group 1 - - - 0.0000000000000008458 90.0
BYD3_k127_2015660_13 cell redox homeostasis - - - 0.0000000000102 70.0
BYD3_k127_2015660_14 Glycosyltransferase like family 2 - - - 0.0000000002006 75.0
BYD3_k127_2015660_15 PFAM glycosyl transferase family 2 - - - 0.00000001362 67.0
BYD3_k127_2015660_16 Polysaccharide deacetylase K22278 - 3.5.1.104 0.0000644 57.0
BYD3_k127_2015660_2 ABC-2 type transporter K09690 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001472 343.0
BYD3_k127_2015660_3 PFAM Dynamin family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005607 351.0
BYD3_k127_2015660_4 transferase activity, transferring glycosyl groups K16703 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001427 355.0
BYD3_k127_2015660_6 protein kinase activity K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000404 198.0
BYD3_k127_2015660_7 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000007599 151.0
BYD3_k127_2015660_8 transferase activity, transferring acyl groups K03824,K15520 - 2.3.1.189 0.000000000000000000000001095 115.0
BYD3_k127_2015660_9 Stf0 sulphotransferase K21014 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0005975,GO:0005984,GO:0005991,GO:0006082,GO:0006139,GO:0006163,GO:0006629,GO:0006725,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008146,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009117,GO:0009150,GO:0009259,GO:0009311,GO:0009987,GO:0016020,GO:0016740,GO:0016782,GO:0017076,GO:0019637,GO:0019693,GO:0030312,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0033865,GO:0033875,GO:0034032,GO:0034035,GO:0034641,GO:0036094,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044262,GO:0044272,GO:0044281,GO:0044464,GO:0046483,GO:0046505,GO:0046506,GO:0046983,GO:0050427,GO:0050656,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0097159,GO:0097367,GO:1901135,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901576,GO:1901681 2.8.2.37 0.0000000000000000000002216 108.0
BYD3_k127_2054036_0 Belongs to the CarB family K01955 - 6.3.5.5 0.0 1333.0
BYD3_k127_2054036_1 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000528 482.0
BYD3_k127_2054036_10 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814 - 2.4.1.129 0.0000000000000000000000000000000000000000000001384 177.0
BYD3_k127_2054036_11 NifU-like N terminal domain K04488 - - 0.00000000000000000000000000000000001303 151.0
BYD3_k127_2054036_12 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530,K05788 - - 0.000000000000000000000000000773 119.0
BYD3_k127_2054036_13 COG2193 Bacterioferritin (cytochrome b1) K03594 - 1.16.3.1 0.00000000000000000008146 97.0
BYD3_k127_2054036_14 Cold shock K03704 - - 0.0000000000000000004145 97.0
BYD3_k127_2054036_15 PFAM Rieske 2Fe-2S K05710 - - 0.000000000000000006522 98.0
BYD3_k127_2054036_16 TonB dependent receptor K02014 - - 0.0000007235 63.0
BYD3_k127_2054036_17 Vitamin K-dependent gamma-carboxylase - - - 0.000004542 59.0
BYD3_k127_2054036_2 pyrroloquinoline quinone binding K21430 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001235 407.0
BYD3_k127_2054036_3 Belongs to the CarA family K01956 - 6.3.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000049 390.0
BYD3_k127_2054036_4 TIGRFAM asparagine synthase (glutamine-hydrolyzing) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001688 373.0
BYD3_k127_2054036_5 Uncharacterized protein family (UPF0051) K09015 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007055 335.0
BYD3_k127_2054036_6 TIGRFAM FeS assembly protein SufB K07033,K09014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001465 307.0
BYD3_k127_2054036_7 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000159 258.0
BYD3_k127_2054036_8 Dimerisation domain of Zinc Transporter K13283 - - 0.0000000000000000000000000000000000000000000000000000000001797 219.0
BYD3_k127_2054036_9 Iron permease FTR1 family K07243 - - 0.0000000000000000000000000000000000000000000000002635 187.0
BYD3_k127_2057629_0 repeat protein - - - 8.781e-222 705.0
BYD3_k127_2057629_1 cellulose binding - - - 9.857e-218 681.0
BYD3_k127_2057629_10 amine dehydrogenase activity K17285 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002248 367.0
BYD3_k127_2057629_11 Protein of unknown function (DUF418) K07148 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005891 344.0
BYD3_k127_2057629_12 glycosyl transferase group 1 K08256,K16150 - 2.4.1.11,2.4.1.345 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002746 319.0
BYD3_k127_2057629_13 Cysteine-rich domain K11473 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004025 324.0
BYD3_k127_2057629_14 3-demethylubiquinone-9 3-methyltransferase K00568 - 2.1.1.222,2.1.1.64 0.000000000000000000000000000000000000000000000000000000000000000000000000000004702 270.0
BYD3_k127_2057629_15 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002613 259.0
BYD3_k127_2057629_16 Glycosyltransferase like family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004757 276.0
BYD3_k127_2057629_17 Glucose / Sorbosone dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004851 250.0
BYD3_k127_2057629_18 acetyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000002091 216.0
BYD3_k127_2057629_19 Protein of unknown function (DUF1428) - - - 0.0000000000000000000000000000000000000000000000000000001032 197.0
BYD3_k127_2057629_2 Belongs to the aldehyde dehydrogenase family K00294 - 1.2.1.88 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008056 608.0
BYD3_k127_2057629_20 Domain of unknown function (DUF305) - - - 0.0000000000000000000000000000000000000000000000000000004291 205.0
BYD3_k127_2057629_21 Deoxynucleoside kinase - - - 0.000000000000000000000000000000000000000000000000000003302 219.0
BYD3_k127_2057629_22 Uncharacterised protein family UPF0066 - - - 0.000000000000000000000000000000000000000000000000000006573 194.0
BYD3_k127_2057629_23 geranylgeranyl reductase activity K21401 - 1.3.99.38 0.00000000000000000000000000000000000000000000000000002512 211.0
BYD3_k127_2057629_24 Glycosyl transferase, family 2 - - - 0.00000000000000000000000000000000000000000000000004019 194.0
BYD3_k127_2057629_25 RNA signal recognition particle 4.5S RNA - - - 0.000000000000000000000000000000000000000000000003225 174.0
BYD3_k127_2057629_26 Deoxynucleoside kinase - - - 0.00000000000000000000000000000000000000000000004684 183.0
BYD3_k127_2057629_27 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000000000000000000000000000000003437 176.0
BYD3_k127_2057629_28 - - - - 0.0000000000000000000000000000000000000000000225 168.0
BYD3_k127_2057629_29 Protein of unknown function, DUF488 - - - 0.00000000000000000000000000000000000000000002753 175.0
BYD3_k127_2057629_3 TrkA-C domain K11105 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002384 600.0
BYD3_k127_2057629_30 Cupin domain - - - 0.0000000000000000000000000000000000000000003207 164.0
BYD3_k127_2057629_31 Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate K02548 - 2.5.1.74 0.000000000000000000000000000000000000000003784 175.0
BYD3_k127_2057629_32 PFAM Cupin domain - - - 0.0000000000000000000000000000000000000002461 166.0
BYD3_k127_2057629_33 PFAM Glucose Sorbosone dehydrogenase K21430 - - 0.00000000000000000000000000000000000001682 162.0
BYD3_k127_2057629_34 - - - - 0.000000000000000000000000000000000008085 152.0
BYD3_k127_2057629_35 Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin - - - 0.0000000000000000000000000000000003243 149.0
BYD3_k127_2057629_36 Methyltransferase domain - - - 0.0000000000000000000000000000000008991 139.0
BYD3_k127_2057629_37 Uncharacterized conserved protein (DUF2277) - - - 0.0000000000000000000000000000000521 129.0
BYD3_k127_2057629_38 - - - - 0.000000000000000000000000000004513 131.0
BYD3_k127_2057629_39 - - - - 0.000000000000000000000000000008748 121.0
BYD3_k127_2057629_4 Major facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004744 518.0
BYD3_k127_2057629_40 Domain of unknown function (DUF4440) - - - 0.000000000000000000000000162 112.0
BYD3_k127_2057629_42 Tetratricopeptide repeat - - - 0.0000000000000000000006492 108.0
BYD3_k127_2057629_43 copper-translocating P-type ATPase K01533 - 3.6.3.4 0.00000000000000009465 89.0
BYD3_k127_2057629_44 Belongs to the 'phage' integrase family - - - 0.0000000000000001057 85.0
BYD3_k127_2057629_45 Protein of unknown function (DUF1579) - - - 0.0000000000005361 81.0
BYD3_k127_2057629_46 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 0.00000003278 62.0
BYD3_k127_2057629_47 Glutathione-dependent formaldehyde-activating enzyme - - - 0.0000006383 63.0
BYD3_k127_2057629_49 SNARE associated Golgi protein - - - 0.000176 44.0
BYD3_k127_2057629_5 ATP-dependent DNA helicase RecQ K03654 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002042 524.0
BYD3_k127_2057629_50 Phage integrase, N-terminal SAM-like domain - - - 0.000601 43.0
BYD3_k127_2057629_6 FAD linked oxidases, C-terminal domain K00104 - 1.1.3.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004477 484.0
BYD3_k127_2057629_7 Beta-lactamase class C - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009681 464.0
BYD3_k127_2057629_8 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007327 477.0
BYD3_k127_2057629_9 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000696 371.0
BYD3_k127_2079754_0 Amidohydrolase family K06015 - 3.5.1.81 4.403e-218 698.0
BYD3_k127_2079754_1 Transketolase, pyrimidine binding domain K00162,K00167 - 1.2.4.1,1.2.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002032 467.0
BYD3_k127_2079754_10 Oxidoreductase family, NAD-binding Rossmann fold K09949 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001821 278.0
BYD3_k127_2079754_11 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.00000000000000000000000000000000000000000000000000000000000000003342 229.0
BYD3_k127_2079754_12 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.0000000000000000000000000000000000000000000000000000000004835 233.0
BYD3_k127_2079754_13 - - - - 0.0000000000000000000000000000000000000000002541 164.0
BYD3_k127_2079754_14 Roadblock/LC7 domain - - - 0.0000000000000000000000000000000000000001034 166.0
BYD3_k127_2079754_15 Cation transport regulator - - - 0.000000000000000000000000000000000002186 147.0
BYD3_k127_2079754_16 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.0000000000000000000000000018 131.0
BYD3_k127_2079754_17 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995,K08744 - 2.7.8.41,2.7.8.5 0.00000000000000000000008382 111.0
BYD3_k127_2079754_18 Phosphatidylglycerophosphatase A K01095 - 3.1.3.27 0.000000000000000000001155 100.0
BYD3_k127_2079754_19 Matrixin - - - 0.000000000000000000201 99.0
BYD3_k127_2079754_2 ATPase with chaperone activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007523 419.0
BYD3_k127_2079754_20 Cupin 2, conserved barrel domain protein - - - 0.000000000000000002017 101.0
BYD3_k127_2079754_21 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008104,GO:0008150,GO:0009966,GO:0010646,GO:0010738,GO:0023051,GO:0033036,GO:0034237,GO:0044424,GO:0044444,GO:0044464,GO:0048583,GO:0050789,GO:0050794,GO:0051018,GO:0051179,GO:0065007,GO:1902531 3.1.4.58 0.0000000000000004048 93.0
BYD3_k127_2079754_22 Rdx family K07401 - - 0.00000000001106 66.0
BYD3_k127_2079754_23 CAAX protease self-immunity K07052 - - 0.0000001119 64.0
BYD3_k127_2079754_24 - - - - 0.0000002539 60.0
BYD3_k127_2079754_25 energy transducer activity K03832 - - 0.000001623 60.0
BYD3_k127_2079754_26 Cation transport regulator K06197 - - 0.000002199 53.0
BYD3_k127_2079754_3 Dehydrogenase E1 component K00161,K00166 - 1.2.4.1,1.2.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000291 381.0
BYD3_k127_2079754_4 Dehydrogenase E1 component K00161,K00166 - 1.2.4.1,1.2.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009733 362.0
BYD3_k127_2079754_5 DegT/DnrJ/EryC1/StrS aminotransferase family K13017 - 2.6.1.98 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000324 369.0
BYD3_k127_2079754_6 acetyltransferase component of pyruvate dehydrogenase complex K00627 - 2.3.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001595 355.0
BYD3_k127_2079754_7 Competence-damaged protein K03742 - 3.5.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001771 326.0
BYD3_k127_2079754_8 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005823 326.0
BYD3_k127_2079754_9 ADP-ribosylation factor family K06883 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000303 307.0
BYD3_k127_2085887_0 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen K00982,K00990 - 2.7.7.42,2.7.7.59,2.7.7.89 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001918 578.0
BYD3_k127_2085887_1 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001141 585.0
BYD3_k127_2085887_10 protein deglycation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003368 272.0
BYD3_k127_2085887_11 Rubrerythrin K03594 - 1.16.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000009589 252.0
BYD3_k127_2085887_12 Domain of Unknown Function (DUF1206) - - - 0.0000000000000000000000000000000000000000000000000000000000000183 225.0
BYD3_k127_2085887_13 - - - - 0.0000000000000000000000000000000000000000000000000000000000308 229.0
BYD3_k127_2085887_14 von Willebrand factor, type A - - - 0.00000000000000000000000000000000000000000000000000000001126 221.0
BYD3_k127_2085887_15 - - - - 0.000000000000000000000000000000000000000000000009623 185.0
BYD3_k127_2085887_16 nitrogen regulatory protein P-II K04751 - - 0.00000000000000000000000000000000000000000001214 165.0
BYD3_k127_2085887_17 protein kinase activity K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000002939 185.0
BYD3_k127_2085887_18 Glycosyl transferase, family 2 - - - 0.00000000000000000000000000000000000000000006177 175.0
BYD3_k127_2085887_19 PFAM Adenylate and Guanylate cyclase catalytic domain - - - 0.000000000000000000000000000000000000000002633 179.0
BYD3_k127_2085887_2 TIGRFAM Ammonium transporter K03320 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008342 536.0
BYD3_k127_2085887_20 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000000000000000000000000001962 155.0
BYD3_k127_2085887_21 Prephenate dehydrogenase K00210 - 1.3.1.12 0.0000000000000000000000000000000003943 144.0
BYD3_k127_2085887_22 bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding K07114 - - 0.00000000000000000000000000002788 125.0
BYD3_k127_2085887_23 - - - - 0.0000000000000000000000002057 120.0
BYD3_k127_2085887_24 - - - - 0.00000000001134 72.0
BYD3_k127_2085887_25 Domain of unknown function (DUF4142) K08995 - - 0.00000001566 67.0
BYD3_k127_2085887_3 Major facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000035 481.0
BYD3_k127_2085887_4 Radical SAM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002278 463.0
BYD3_k127_2085887_5 Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions K21071 - 2.7.1.11,2.7.1.90 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007559 439.0
BYD3_k127_2085887_6 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006433 408.0
BYD3_k127_2085887_7 Peptidase family S58 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003959 411.0
BYD3_k127_2085887_8 Zinc-binding dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007972 388.0
BYD3_k127_2085887_9 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002728 309.0
BYD3_k127_2086003_0 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 1.582e-205 663.0
BYD3_k127_2086003_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006828 569.0
BYD3_k127_2086003_10 Transmembrane secretion effector - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001289 278.0
BYD3_k127_2086003_11 CDP-alcohol phosphatidyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003199 264.0
BYD3_k127_2086003_12 Rhomboid family - - - 0.000000000000000000000000000000000000000000000000000000000006147 218.0
BYD3_k127_2086003_13 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000008578 229.0
BYD3_k127_2086003_14 Methyltransferase - - - 0.0000000000000000000000000000000000000000000000000007211 200.0
BYD3_k127_2086003_15 ubiE/COQ5 methyltransferase family - - - 0.00000000000000000000000000000000000000000000593 171.0
BYD3_k127_2086003_16 methylamine metabolic process K15977 - - 0.00000000000000000000000000000000001076 145.0
BYD3_k127_2086003_17 Phosphohistidine phosphatase, SixA K08296 - - 0.000000000000000000008128 100.0
BYD3_k127_2086003_18 - - - - 0.00000000000000000001283 106.0
BYD3_k127_2086003_19 Coenzyme PQQ synthesis protein D (PqqD) K06138 - - 0.000000000000007721 82.0
BYD3_k127_2086003_2 polyphosphate kinase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000149 551.0
BYD3_k127_2086003_20 biosynthesis protein E K06139 - - 0.00000000000006507 74.0
BYD3_k127_2086003_3 COGs COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains K02481,K07714 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000859 559.0
BYD3_k127_2086003_4 Alcohol dehydrogenase GroES-like domain K13953 - 1.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004527 509.0
BYD3_k127_2086003_5 Histidine kinase K01768,K02482,K02660,K03406,K05874,K07315,K10819,K11525,K11617 - 2.7.13.3,3.1.3.3,4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001891 483.0
BYD3_k127_2086003_6 LVIVD repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001198 430.0
BYD3_k127_2086003_7 Ring cyclization and eight-electron oxidation of 3a-(2- amino-2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline- 7,9-dicarboxylic-acid to PQQ K06137 - 1.3.3.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005081 316.0
BYD3_k127_2086003_8 May be involved in the transport of PQQ or its precursor to the periplasm K06136 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005544 275.0
BYD3_k127_2086003_9 Glutathione synthase Ribosomal protein S6 modification enzyme (Glutaminyl transferase) K01955 - 6.3.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000001747 282.0
BYD3_k127_2128508_0 Catalyzes the attachment of glycine to tRNA(Gly) K01880 GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0004812,GO:0004820,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006426,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009345,GO:0009987,GO:0010467,GO:0016070,GO:0016594,GO:0016597,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0031406,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0042165,GO:0042802,GO:0042803,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043177,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046983,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.14 9.869e-201 635.0
BYD3_k127_2128508_1 Lytic transglycosylase, SLT, LysM and LysM domain-containing K08307 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002512 320.0
BYD3_k127_2128508_2 Sodium:solute symporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002351 290.0
BYD3_k127_2128508_3 Ami_3 K01448 - 3.5.1.28 0.00000000000000000000000000000000000000000000000000000000000000000000002254 273.0
BYD3_k127_2128508_4 PFAM NADP oxidoreductase coenzyme F420-dependent K00020 - 1.1.1.31 0.00000000000000000000000000000000000000000000000000000000000000000002472 259.0
BYD3_k127_2128508_5 PFAM Haloacid dehalogenase domain protein hydrolase K01560,K07025 - 3.8.1.2 0.00000000000000000000000000000000000000000000000000000000000002751 223.0
BYD3_k127_2128508_7 - K03641 - - 0.00000000000000000000000000009739 135.0
BYD3_k127_2128508_8 HD domain - - - 0.000000000000000000001079 109.0
BYD3_k127_2128508_9 - - - - 0.000000000000001461 82.0
BYD3_k127_2178858_0 Belongs to the deoxyhypusine synthase family K00809 - 2.5.1.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000766 483.0
BYD3_k127_2178858_1 pyrroloquinoline quinone binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001135 407.0
BYD3_k127_2178858_10 TIGRFAM single-stranded-DNA-specific exonuclease RecJ K07462 - - 0.000000109 61.0
BYD3_k127_2178858_2 DNA polymerase LigD polymerase domain K01971 - 6.5.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001066 316.0
BYD3_k127_2178858_3 Peptidase dimerisation domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003007 325.0
BYD3_k127_2178858_4 Glycosyltransferase like family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002834 266.0
BYD3_k127_2178858_5 Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate K01807 - 5.3.1.6 0.000000000000000000000000000000000000000000000000000000000000001597 242.0
BYD3_k127_2178858_6 DHH family K06881 - 3.1.13.3,3.1.3.7 0.00000000000000000000000000000000000000000000000000000000002619 219.0
BYD3_k127_2178858_7 peptidyl-prolyl cis-trans isomerase K01802,K03772 - 5.2.1.8 0.00000000000000000000000000000000000000000000000025 184.0
BYD3_k127_2178858_8 Glycosyl transferase, family 2 - - - 0.0000000000000000000000000000000000002827 160.0
BYD3_k127_2178858_9 NmrA-like family - - - 0.0000000000000000000000000000000001826 154.0
BYD3_k127_2192333_0 efflux transmembrane transporter activity - - - 2.385e-263 842.0
BYD3_k127_2192333_1 receptor K16091 - - 1.245e-215 697.0
BYD3_k127_2192333_10 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03564 - 1.11.1.15 0.0000000000000000000000000000000000000001729 158.0
BYD3_k127_2192333_11 negative regulation of transcription, DNA-templated - - - 0.0000000000000000000000000000000001517 138.0
BYD3_k127_2192333_12 signal transduction protein containing a membrane domain an EAL and a GGDEF domain K21023 - 2.7.7.65 0.00000000000000000000001992 115.0
BYD3_k127_2192333_13 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000001145 78.0
BYD3_k127_2192333_14 ABC-type transport system, involved in lipoprotein release, permease component K02004 - - 0.0004836 51.0
BYD3_k127_2192333_2 PFAM Alcohol dehydrogenase GroES domain protein K00008 - 1.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001073 610.0
BYD3_k127_2192333_3 Pyridoxal-dependent decarboxylase conserved domain K01593 - 4.1.1.105,4.1.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009476 558.0
BYD3_k127_2192333_4 Beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001206 464.0
BYD3_k127_2192333_5 AAA domain K07028 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002893 482.0
BYD3_k127_2192333_6 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002576 412.0
BYD3_k127_2192333_7 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.000000000000000000000000000000000000000000000000000000000000000000000000003505 267.0
BYD3_k127_2192333_8 Polyketide cyclase / dehydrase and lipid transport - - - 0.0000000000000000000000000000000000000000000000000000000000000009172 231.0
BYD3_k127_2192333_9 ABC-type antimicrobial peptide transport system, ATPase component K02003 - - 0.0000000000000000000000000000000000000000000000000000000000002154 222.0
BYD3_k127_2195131_0 DEAD DEAH box helicase K03724 - - 0.0 1540.0
BYD3_k127_2195131_1 COG0380 Trehalose-6-phosphate synthase K00697 - 2.4.1.15,2.4.1.347 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001005 441.0
BYD3_k127_2195131_10 - - - - 0.0000000000000000007128 94.0
BYD3_k127_2195131_11 helix_turn_helix, Arsenical Resistance Operon Repressor K03823,K03892,K05793 - 2.3.1.183 0.000000000000000002895 91.0
BYD3_k127_2195131_12 Glycosyltransferase like family 2 - - - 0.00000000000127 79.0
BYD3_k127_2195131_13 - - - - 0.00000003997 59.0
BYD3_k127_2195131_14 MobA-like NTP transferase domain K07141,K19190 - 1.1.1.328,2.7.7.76 0.00003161 49.0
BYD3_k127_2195131_2 Phospholipase D Transphosphatidylase K06131 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003546 291.0
BYD3_k127_2195131_3 XdhC and CoxI family K07402 - - 0.00000000000000000000000000000000000000000000000000000000000000002758 241.0
BYD3_k127_2195131_4 methyltransferase K07755 - 2.1.1.137 0.0000000000000000000000000000000000000000000000000000007177 213.0
BYD3_k127_2195131_5 Domain in cystathionine beta-synthase and other proteins. - - - 0.000000000000000000000000000000000000000000000000351 201.0
BYD3_k127_2195131_6 protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000008218 171.0
BYD3_k127_2195131_7 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000008903 147.0
BYD3_k127_2195131_8 cheY-homologous receiver domain - - - 0.00000000000000000000000009073 121.0
BYD3_k127_2195131_9 Domain of unknown function (DUF4383) - - - 0.0000000000000000000000932 117.0
BYD3_k127_2229905_0 ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity K06048 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004534 479.0
BYD3_k127_2229905_1 Evidence 4 Homologs of previously reported genes of - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004436 407.0
BYD3_k127_2229905_2 aminopeptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001858 380.0
BYD3_k127_2229905_3 ligase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002515 362.0
BYD3_k127_2229905_4 esterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000008861 237.0
BYD3_k127_2246805_0 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 4.821e-245 769.0
BYD3_k127_2246805_1 Peptidase family M28 - - - 1.753e-200 649.0
BYD3_k127_2246805_2 ribonuclease activity - - - 0.0000000000000000000000000000000000000000000000000000000000002454 213.0
BYD3_k127_2246805_3 cellulase activity - - - 0.00000000000000000000000000000000000002477 158.0
BYD3_k127_2246805_5 toxin-antitoxin pair type II binding - - - 0.000000000000000000005824 94.0
BYD3_k127_2246805_6 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.000000000004022 68.0
BYD3_k127_2246805_7 exo-alpha-(2->6)-sialidase activity - - - 0.00006048 55.0
BYD3_k127_2348261_0 MoeA domain protein domain I and II K03750,K07219 - 2.10.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005798 479.0
BYD3_k127_2348261_1 Domain of unknown function (DUF4139) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001942 427.0
BYD3_k127_2348261_10 Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides K07232 - - 0.000000001973 65.0
BYD3_k127_2348261_2 major pilin protein fima - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005955 394.0
BYD3_k127_2348261_3 Molybdenum Cofactor Synthesis K03750 - 2.10.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003941 298.0
BYD3_k127_2348261_4 deaminated base DNA N-glycosylase activity K21929 GO:0003674,GO:0003824,GO:0004844,GO:0005488,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0033554,GO:0033958,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0048037,GO:0050896,GO:0051536,GO:0051539,GO:0051540,GO:0051716,GO:0071704,GO:0090304,GO:0097506,GO:0140097,GO:1901360 3.2.2.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000305 263.0
BYD3_k127_2348261_5 Necessary for formate dehydrogenase activity K02380 - - 0.000000000000000000000000000000000006425 148.0
BYD3_k127_2348261_6 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000009886 141.0
BYD3_k127_2348261_7 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000009084 132.0
BYD3_k127_2348261_8 Protein of unknown function (DUF971) K03593 - - 0.000000000000000000002918 98.0
BYD3_k127_2348261_9 Domain of unknown function (DUF4412) - - - 0.0000000005097 70.0
BYD3_k127_2374667_0 UvrD-like helicase C-terminal domain K03657 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001184 638.0
BYD3_k127_2374667_1 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase K00261 - 1.4.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006089 607.0
BYD3_k127_2374667_2 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001254 470.0
BYD3_k127_2374667_3 Amino acid permease K03294 - - 0.0000000000000000000000000000000000000000000000000000000000000000003003 251.0
BYD3_k127_2374667_4 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.00000000000000000000000000000002536 138.0
BYD3_k127_2374667_5 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 - 2.1.1.177 0.000000000000000000000000000007538 124.0
BYD3_k127_2383489_0 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007929 426.0
BYD3_k127_2383489_1 6-phosphogluconate dehydrogenase, C-terminal domain K00033 - 1.1.1.343,1.1.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003553 281.0
BYD3_k127_2383489_2 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K11991 - 3.5.4.33 0.0000000000000000000000000000000000000000000002285 175.0
BYD3_k127_2383489_3 PFAM glucosamine galactosamine-6-phosphate isomerase K01057 - 3.1.1.31 0.00000000000000000000000000000000000000000002175 185.0
BYD3_k127_2383489_4 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000000000000000000001089 126.0
BYD3_k127_2383489_5 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 0.0000000000000000000003636 108.0
BYD3_k127_2383489_6 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000001565 72.0
BYD3_k127_238942_0 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 4.755e-229 748.0
BYD3_k127_238942_1 Belongs to the cysteine synthase cystathionine beta- synthase family K01697,K01738,K18926 - 2.5.1.47,4.2.1.22 0.0000000000000000000005942 98.0
BYD3_k127_238942_2 Cell division protein - - - 0.00003685 57.0
BYD3_k127_238942_3 lytic transglycosylase activity K08309 - - 0.00006415 56.0
BYD3_k127_238942_4 TIGRFAM DNA polymerase III, delta subunit K02340 - 2.7.7.7 0.00008968 50.0
BYD3_k127_2433248_0 COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases K09461 - 1.14.13.40 3.309e-293 909.0
BYD3_k127_2433248_1 Peptidase family M48 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001189 460.0
BYD3_k127_2433248_10 Na( ) H( ) antiporter that extrudes sodium in exchange for external protons - - - 0.000000000000000000002527 103.0
BYD3_k127_2433248_2 COG0457 FOG TPR repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007289 450.0
BYD3_k127_2433248_3 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009493 430.0
BYD3_k127_2433248_4 Histidine kinase K07636 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003463 380.0
BYD3_k127_2433248_5 tryptophan 2,3-dioxygenase activity K00453 GO:0003674,GO:0003824,GO:0004833,GO:0005488,GO:0006082,GO:0006520,GO:0006568,GO:0006569,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009072,GO:0009074,GO:0009308,GO:0009310,GO:0009987,GO:0016043,GO:0016054,GO:0016491,GO:0016701,GO:0016702,GO:0019439,GO:0019441,GO:0019752,GO:0020037,GO:0022607,GO:0034641,GO:0042180,GO:0042402,GO:0042430,GO:0042436,GO:0042537,GO:0043436,GO:0043933,GO:0044085,GO:0044106,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0046218,GO:0046395,GO:0046483,GO:0046700,GO:0046906,GO:0048037,GO:0051213,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0070189,GO:0071704,GO:0071840,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 1.13.11.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001033 362.0
BYD3_k127_2433248_6 Predicted membrane protein (DUF2231) - - - 0.000000000000000000000000000000000000000000000000000000000000000004182 236.0
BYD3_k127_2433248_7 Uracil DNA glycosylase superfamily K21929 - 3.2.2.27 0.000000000000000000000000000000000000000000000000000000000001386 224.0
BYD3_k127_2433248_8 PFAM OsmC family protein - - - 0.000000000000000000000000000000000000000000203 165.0
BYD3_k127_2433248_9 Protein of unknown function (DUF498/DUF598) - - - 0.00000000000000000000000000000000000000002089 160.0
BYD3_k127_2541187_0 Cellobiose phosphorylase K00702,K13688,K18675 - 2.4.1.20,2.4.1.280 0.0 2288.0
BYD3_k127_2541187_1 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296,K07788,K07789,K18138 - - 0.0 1108.0
BYD3_k127_2541187_2 Hydantoinase/oxoprolinase K01469,K01473 - 3.5.2.14,3.5.2.9 0.0 1093.0
BYD3_k127_2541187_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07799 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005766 290.0
BYD3_k127_2541187_4 Rhodanese Homology Domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000007258 263.0
BYD3_k127_2541187_5 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) - - - 0.000000000000000000000000000000000000000000000000000000000000002844 224.0
BYD3_k127_2541187_6 COG0589 Universal stress protein UspA and related nucleotide-binding proteins - - - 0.00000000000003674 84.0
BYD3_k127_2541187_7 - - - - 0.000000000003986 70.0
BYD3_k127_2622702_0 Belongs to the formate--tetrahydrofolate ligase family K01938 - 6.3.4.3 1.072e-221 711.0
BYD3_k127_2622702_1 TatD related DNase K03424 - - 0.0000000000000000000000000000000000000003638 153.0
BYD3_k127_2622702_2 endoribonuclease L-PSP K01482 - 3.5.3.18 0.0000000000000000000000000000000000003207 162.0
BYD3_k127_2622702_3 Cytochrome c - - - 0.0000000000000000000000000000000004909 143.0
BYD3_k127_2622702_4 COG0084 Mg-dependent DNase K03424 - - 0.0000000179 59.0
BYD3_k127_2638255_0 Carboxypeptidase regulatory-like domain - - - 1.187e-231 772.0
BYD3_k127_2638255_1 5'-nucleotidase, C-terminal domain K01081 - 3.1.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001506 597.0
BYD3_k127_2638255_2 adenosine deaminase K01488 - 3.5.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001428 404.0
BYD3_k127_2638255_3 PFAM response regulator receiver K07657 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001298 252.0
BYD3_k127_2638255_4 Mannosyltransferase (PIG-V) - - - 0.00000000000000000000003624 114.0
BYD3_k127_2679159_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00283 - 1.4.4.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002458 571.0
BYD3_k127_2679159_1 Belongs to the ABC transporter superfamily K02031 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004256 415.0
BYD3_k127_2679159_2 PFAM binding-protein-dependent transport systems inner membrane component K02033 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005578 360.0
BYD3_k127_2679159_3 Peptide nickel ABC transporter, substrate-binding protein K02035 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007043 345.0
BYD3_k127_2679159_4 Extracellular solute-binding protein, family 5 K02035 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005083 339.0
BYD3_k127_2679159_5 PFAM Binding-protein-dependent transport system inner membrane component K02034 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000771 317.0
BYD3_k127_2679159_6 PFAM Biotin lipoate A B protein ligase K03800 - 6.3.1.20 0.0000000000000000000000000001715 134.0
BYD3_k127_2679159_7 COG0457 FOG TPR repeat - - - 0.00000000000000000000000002958 110.0
BYD3_k127_2743975_0 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001221 474.0
BYD3_k127_2743975_1 Glucose sorbosone K21430 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002919 329.0
BYD3_k127_2743975_2 phosphoprotein phosphatase activity - - - 0.000000000000000000000000000000000000000000000000000000001722 205.0
BYD3_k127_2743975_3 Formyl transferase K11175 - 2.1.2.2 0.00000000000000000000000000000000000000000001326 186.0
BYD3_k127_2743975_4 Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity K06188 - - 0.0000000000000000000000000000000000000005735 162.0
BYD3_k127_2743975_5 Calcineurin-like phosphoesterase superfamily domain - - - 0.00000000000000000001199 97.0
BYD3_k127_2768283_0 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 - 3.3.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004185 542.0
BYD3_k127_2768283_1 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 GO:0003674,GO:0003824,GO:0004478,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016740,GO:0016765,GO:0044424,GO:0044444,GO:0044464 2.5.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005894 534.0
BYD3_k127_2768283_2 Bifunctional phosphoglucose phosphomannose isomerase K15916 - 5.3.1.8,5.3.1.9 0.00000000000000000000000000000000000000000000000000000000000003144 226.0
BYD3_k127_2768283_3 Periplasmic binding protein K02016 - - 0.000000000000000000000000000000000000000000001096 188.0
BYD3_k127_2768283_4 Bifunctional nuclease K08999 - - 0.0000000000000000000000000000000000000004259 155.0
BYD3_k127_2768283_5 ABC transporter K02013 - 3.6.3.34 0.00000000000000000000000000000000000002075 165.0
BYD3_k127_2768283_6 TonB-dependent receptor K16092 - - 0.0000000000000000000000000001365 135.0
BYD3_k127_2768283_7 TIGRFAM 40-residue YVTN family beta-propeller repeat protein - - - 0.0000003669 62.0
BYD3_k127_2830847_0 Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP K00763 - 6.3.4.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009 506.0
BYD3_k127_2830847_1 Domain of unkown function (DUF1775) - - - 0.0000000000000000000000004046 122.0
BYD3_k127_2830847_2 Cold shock K03704 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006355,GO:0006950,GO:0008150,GO:0009266,GO:0009409,GO:0009628,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0044424,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1903506,GO:2000112,GO:2001141 - 0.0000000000000000000000004881 108.0
BYD3_k127_2830847_3 CopC domain K14166 - - 0.00000000000000000000002113 114.0
BYD3_k127_2902_0 PQQ-like domain K00114 - 1.1.2.8 6.912e-231 732.0
BYD3_k127_2902_1 TIGRFAM 40-residue YVTN family beta-propeller repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001166 330.0
BYD3_k127_2902_2 Bacterial extracellular solute-binding proteins, family 3 K16254 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008658 282.0
BYD3_k127_2902_3 Pentapeptide repeats (9 copies) - - - 0.00000000000000000000000000001273 136.0
BYD3_k127_2902_4 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000000000009316 85.0
BYD3_k127_2902_5 Catalyzes the formation of 4-(hydroxymethyl)-2- furancarboxaldehyde phosphate (4-HFC-P) from two molecules of glyceraldehyde-3-P (GA-3-P) K09733 - 4.2.3.153 0.0004444 50.0
BYD3_k127_291651_0 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008163 434.0
BYD3_k127_291651_1 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005695 434.0
BYD3_k127_291651_2 domain, Protein K01179,K07260,K13735 - 3.2.1.4,3.4.17.14 0.000000000000000000000000000000000000000000000000000000000000000000003749 264.0
BYD3_k127_291651_3 PFAM Peptidase M23 - - - 0.0000000000000000000000000000000000000000000000000000000000000006907 241.0
BYD3_k127_291651_4 Cell division protein FtsQ K03589 - - 0.0000002623 62.0
BYD3_k127_2956247_0 Aminotransferase class-III K01845 - 5.4.3.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009814 505.0
BYD3_k127_2956247_1 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 GO:0003674,GO:0003824,GO:0004853,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002296 362.0
BYD3_k127_2956247_2 AsnC-type helix-turn-helix domain K05710 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002203 360.0
BYD3_k127_2956247_3 Delta-aminolevulinic acid dehydratase K01698 - 4.2.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005487 360.0
BYD3_k127_2956247_4 Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX K00231 - 1.3.3.15,1.3.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006342 354.0
BYD3_k127_2956247_5 Catalyzes the ferrous insertion into protoporphyrin IX K01772 - 4.99.1.1,4.99.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001568 324.0
BYD3_k127_2956247_6 Tetrapyrrole (Corrin/Porphyrin) Methylases K01719,K01749,K02303,K13542,K13543 GO:0003674,GO:0003824,GO:0004851,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008169,GO:0008757,GO:0009058,GO:0009987,GO:0016740,GO:0016741,GO:0018130,GO:0019354,GO:0019438,GO:0032259,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0046148,GO:0046156,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.1.107,2.5.1.61,4.2.1.75 0.0000000000000000000000000000000000000000000000009422 187.0
BYD3_k127_2956247_7 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.0000000000000000000000000000000000000000000005504 192.0
BYD3_k127_2956247_8 Porphobilinogen deaminase, dipyromethane cofactor binding domain K01749 GO:0003674,GO:0003824,GO:0004418,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016020,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0040007,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0071944,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.61 0.0000000000000000383 85.0
BYD3_k127_2970711_0 Type IV pilus assembly protein PilM; K02662 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001017 313.0
BYD3_k127_2970711_1 Glycosyltransferase like family 2 K20534 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001257 334.0
BYD3_k127_2970711_10 protein transport across the cell outer membrane K08084 - - 0.0002503 54.0
BYD3_k127_2970711_2 4-amino-4-deoxy-L-arabinose transferase activity K14340 - - 0.000000000000000000000000000000000000000000000000000000000009828 233.0
BYD3_k127_2970711_3 methyltransferase K05928 - 2.1.1.95 0.00000000000000000000000000000000000000007012 162.0
BYD3_k127_2970711_4 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000000000000000000000000000000104 145.0
BYD3_k127_2970711_5 Fimbrial assembly protein (PilN) - - - 0.000000000000000005318 96.0
BYD3_k127_2970711_6 type IV pilus modification protein PilV K02458,K02671 - - 0.00000001551 66.0
BYD3_k127_2970711_7 Pilus assembly protein PilO K02664 - - 0.0000000309 65.0
BYD3_k127_2970711_8 pilus assembly protein PilW - - - 0.000005803 58.0
BYD3_k127_2970711_9 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00003278 52.0
BYD3_k127_2979033_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 3.705e-283 901.0
BYD3_k127_2979033_1 The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate K03783 - 2.4.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006538 285.0
BYD3_k127_2979033_10 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.000003606 58.0
BYD3_k127_2979033_2 long-chain fatty acid transport protein - - - 0.00000000000000000000000000000000000000000000002237 184.0
BYD3_k127_2979033_3 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.000000000000000000000000000000000000006741 160.0
BYD3_k127_2979033_4 Prokaryotic dksA/traR C4-type zinc finger - - - 0.0000000000000000000000000000000004124 153.0
BYD3_k127_2979033_5 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000000000001113 151.0
BYD3_k127_2979033_6 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.00000000000000000000001309 111.0
BYD3_k127_2979033_7 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 - 2.5.1.3 0.0000000000000000000004338 109.0
BYD3_k127_2979033_8 - - - - 0.0000000000000000001266 104.0
BYD3_k127_2979033_9 PFAM DivIVA protein K04074 - - 0.00000000000000001385 94.0
BYD3_k127_299305_0 WD40-like Beta Propeller Repeat K03641,K07277 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007838 595.0
BYD3_k127_299305_1 Polysaccharide biosynthesis protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002491 296.0
BYD3_k127_299305_2 L-asparaginase II - - - 0.000000000000000000000000000000000000000000000000000000000000000000000354 262.0
BYD3_k127_299305_3 COG0697 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.000000000000000000000000000000000000000000000005697 192.0
BYD3_k127_299305_4 Thioesterase-like superfamily K07107 - - 0.000000000000000000000000001477 119.0
BYD3_k127_299305_5 Carboxymuconolactone decarboxylase family K01607 - 4.1.1.44 0.000000000000000000001159 107.0
BYD3_k127_299305_6 asparaginyl-tRNA synthetase K01893 - 6.1.1.22 0.00000000000000004743 95.0
BYD3_k127_299305_7 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K17713 - - 0.000000000007357 77.0
BYD3_k127_299305_8 COG0477 Permeases of the major facilitator superfamily - - - 0.0000000115 65.0
BYD3_k127_3039684_0 PFAM NAD-dependent epimerase dehydratase K01784 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006948 316.0
BYD3_k127_3039684_1 TolB amino-terminal domain K03641 GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006810,GO:0008104,GO:0008150,GO:0009719,GO:0009987,GO:0010033,GO:0010243,GO:0015031,GO:0015833,GO:0015893,GO:0017038,GO:0019534,GO:0019904,GO:0022857,GO:0030288,GO:0030313,GO:0031975,GO:0032153,GO:0032991,GO:0033036,GO:0042221,GO:0042493,GO:0042597,GO:0042886,GO:0042891,GO:0043213,GO:0044464,GO:0044877,GO:0045184,GO:0046677,GO:0046678,GO:0050896,GO:0051179,GO:0051234,GO:0051716,GO:0055085,GO:0070887,GO:0071236,GO:0071237,GO:0071310,GO:0071417,GO:0071495,GO:0071702,GO:0071705,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1901998 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001282 276.0
BYD3_k127_3039684_10 MacB-like periplasmic core domain K02004 - - 0.0000000000001105 72.0
BYD3_k127_3039684_11 TonB C terminal K03832 - - 0.0000000001218 70.0
BYD3_k127_3039684_2 Protein of unknown function DUF72 - - - 0.00000000000000000000000000000000000000000000000000000000000003758 228.0
BYD3_k127_3039684_3 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes K03118 - - 0.00000000000000000000000000000000000000000000000000006769 204.0
BYD3_k127_3039684_4 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.0000000000000000000000000000000000000000000000001865 183.0
BYD3_k127_3039684_5 PFAM MotA TolQ ExbB proton channel K03562 - - 0.00000000000000000000000000000000000004778 158.0
BYD3_k127_3039684_6 Belongs to the ompA family K03640 - - 0.00000000000000000000000000000000019 140.0
BYD3_k127_3039684_7 PFAM Biopolymer transport protein ExbD TolR K03560 - - 0.000000000000000000000000001944 126.0
BYD3_k127_3039684_8 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - GO:0005575,GO:0005623,GO:0008150,GO:0009987,GO:0016043,GO:0022607,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043933,GO:0044085,GO:0044464,GO:0051259,GO:0051260,GO:0051301,GO:0065003,GO:0071840 - 0.00000000000000005778 94.0
BYD3_k127_3039684_9 Belongs to the bacterial ribosomal protein bL28 family K02902 GO:0003674,GO:0003735,GO:0005198 - 0.000000000000002394 81.0
BYD3_k127_3048494_0 PglZ domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001561 528.0
BYD3_k127_3048494_1 ABC transporter K02021,K06147,K06148,K11085 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007607 458.0
BYD3_k127_3048494_10 Glycosyl transferases group 1 - - - 0.0000000007239 71.0
BYD3_k127_3048494_2 PFAM Glycosyl transferase, group 1 - - - 0.000000000000000000000000000000000000000000006818 181.0
BYD3_k127_3048494_3 Glycosyl transferases group 1 K13668 - 2.4.1.346 0.0000000000000000000000000000000000000000005388 178.0
BYD3_k127_3048494_4 PFAM glycosyl transferase family 9 K02843 - - 0.00000000000000000000000000000000000003179 158.0
BYD3_k127_3048494_5 PFAM glycosyl transferase family 9 K02843,K02849 - - 0.000000000000000000000000000000000002031 154.0
BYD3_k127_3048494_6 PFAM Glycosyl transferase, group 1 K13668 - 2.4.1.346 0.000000000000000000000000000000000003944 154.0
BYD3_k127_3048494_8 transferase activity, transferring glycosyl groups - - - 0.00000000000000000000001121 116.0
BYD3_k127_3048494_9 PFAM Polysaccharide biosynthesis protein - - - 0.00000000000000001997 97.0
BYD3_k127_307052_0 DSBA-like thioredoxin domain - - - 2.787e-254 799.0
BYD3_k127_307052_1 ABC1 family K03688 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001237 402.0
BYD3_k127_307052_2 metallopeptidase activity K06212,K06402 GO:0003674,GO:0003824,GO:0003938,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0005887,GO:0006139,GO:0006163,GO:0006164,GO:0006183,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009163,GO:0009165,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016020,GO:0016021,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0030312,GO:0031224,GO:0031226,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0046039,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004847 341.0
BYD3_k127_307052_3 Phospholipase/Carboxylesterase K06999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001008 271.0
BYD3_k127_307052_4 PFAM histone deacetylase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001142 268.0
BYD3_k127_307052_5 NUDIX domain K03575 - - 0.000000000000002676 85.0
BYD3_k127_307052_6 Calcineurin-like phosphoesterase K14379 - 3.1.3.2 0.00000118 62.0
BYD3_k127_307052_7 K COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit - - - 0.0001441 53.0
BYD3_k127_3265726_0 Highly conserved protein containing a thioredoxin domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003713 424.0
BYD3_k127_3265726_1 glycosyl transferase group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001972 360.0
BYD3_k127_3265726_10 - - - - 0.00000007454 66.0
BYD3_k127_3265726_11 Transcriptional regulator - - - 0.00000009682 56.0
BYD3_k127_3265726_2 transferase activity, transferring glycosyl groups - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006104 369.0
BYD3_k127_3265726_3 Domain of unknown function (DUF4185) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003265 292.0
BYD3_k127_3265726_4 Glycosyl transferase, group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001071 296.0
BYD3_k127_3265726_5 Domain of unknown function (DUF4185) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002681 279.0
BYD3_k127_3265726_6 undecaprenyl-phosphate glucose phosphotransferase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000001784 257.0
BYD3_k127_3265726_7 Domain of unknown function (DUF4142) K08995 - - 0.00000000000000000000000000000000000000001582 160.0
BYD3_k127_3265726_8 Protein conserved in bacteria K20444 - - 0.00000000000000000009339 104.0
BYD3_k127_3265726_9 PFAM blue (type 1) copper domain protein - - - 0.000000000000002713 82.0
BYD3_k127_3317660_0 type I phosphodiesterase nucleotide pyrophosphatase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001841 458.0
BYD3_k127_3317660_1 Glycosyltransferase like family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001899 277.0
BYD3_k127_3317660_2 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.00000000000000000000000000000000001881 156.0
BYD3_k127_3317660_3 heme oxygenase (decyclizing) activity - - - 0.000000000000000000000000000001251 125.0
BYD3_k127_3317660_4 transferase activity, transferring glycosyl groups - - - 0.000000000003343 79.0
BYD3_k127_3352673_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 GO:0003674,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.7 2.171e-267 849.0
BYD3_k127_3352673_1 recA bacterial DNA recombination protein K03553 GO:0000150,GO:0000166,GO:0000287,GO:0000725,GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008094,GO:0008144,GO:0008150,GO:0008152,GO:0009314,GO:0009411,GO:0009416,GO:0009432,GO:0009605,GO:0009628,GO:0009650,GO:0009987,GO:0009991,GO:0016462,GO:0016787,GO:0016788,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0030145,GO:0030554,GO:0031668,GO:0032553,GO:0032555,GO:0032559,GO:0033554,GO:0034641,GO:0035639,GO:0036094,GO:0042148,GO:0042221,GO:0042623,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046677,GO:0046872,GO:0046914,GO:0050896,GO:0051716,GO:0071496,GO:0071704,GO:0090304,GO:0090305,GO:0097159,GO:0097367,GO:0140097,GO:1901265,GO:1901360,GO:1901363 - 2.077e-223 721.0
BYD3_k127_3352673_10 COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 - 2.3.1.51 0.0000000000000000000000000000000000000007214 164.0
BYD3_k127_3352673_11 EamA-like transporter family - - - 0.000000000000000000000000000002055 134.0
BYD3_k127_3352673_12 Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione K01759 GO:0003674,GO:0003824,GO:0004462,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006081,GO:0006082,GO:0006089,GO:0008150,GO:0008152,GO:0009056,GO:0009438,GO:0009987,GO:0016151,GO:0016829,GO:0016846,GO:0019243,GO:0019752,GO:0032787,GO:0042180,GO:0042182,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046185,GO:0046872,GO:0046914,GO:0051596,GO:0061727,GO:0071704,GO:1901575,GO:1901615 4.4.1.5 0.000000000000000000000000006894 117.0
BYD3_k127_3352673_13 RecX family K03565 - - 0.00000000000000000005659 98.0
BYD3_k127_3352673_14 Sigma-70, region 4 K03088 - - 0.00000000000000006876 92.0
BYD3_k127_3352673_15 Domain of unknown function (DUF4388) - - - 0.000000000005639 78.0
BYD3_k127_3352673_16 Type IV Pilus-assembly protein W - - - 0.00006268 55.0
BYD3_k127_3352673_19 Type II transport protein GspH K08084 - - 0.0004248 49.0
BYD3_k127_3352673_2 Pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004351 509.0
BYD3_k127_3352673_3 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004421 487.0
BYD3_k127_3352673_4 M61 glycyl aminopeptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002545 378.0
BYD3_k127_3352673_5 FAD linked oxidases, C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001892 292.0
BYD3_k127_3352673_6 protein kinase activity K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000001961 279.0
BYD3_k127_3352673_7 TIGRFAM GTP cyclohydrolase I K01495 - 3.5.4.16 0.0000000000000000000000000000000000000000000000000000000000000000000003999 256.0
BYD3_k127_3352673_8 Metal binding domain of Ada K00567 - 2.1.1.63 0.000000000000000000000000000000000000000002192 167.0
BYD3_k127_3352673_9 GAF domain K08968 - 1.8.4.14 0.00000000000000000000000000000000000000008805 171.0
BYD3_k127_3373580_0 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 0.0 1041.0
BYD3_k127_3373580_1 Belongs to the glycosyl hydrolase 13 family K01214 - 3.2.1.68 5.781e-272 894.0
BYD3_k127_3373580_2 1,4-alpha-glucan branching enzyme activity K01236 GO:0000272,GO:0003674,GO:0003824,GO:0004553,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0005984,GO:0005991,GO:0005992,GO:0006073,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009251,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016052,GO:0016787,GO:0016798,GO:0030978,GO:0030980,GO:0033942,GO:0034637,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044247,GO:0044248,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044275,GO:0044424,GO:0044444,GO:0044464,GO:0046351,GO:0071704,GO:1901575,GO:1901576 3.2.1.141 2.795e-202 667.0
BYD3_k127_3373580_3 4-alpha-glucanotransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001522 407.0
BYD3_k127_3373580_4 Alpha-amylase domain K05343 - 3.2.1.1,5.4.99.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003557 353.0
BYD3_k127_3427256_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 2.335e-253 807.0
BYD3_k127_3427256_1 Mo-molybdopterin cofactor metabolic process K03148,K03636,K21029,K21147 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006534,GO:0006535,GO:0006563,GO:0006732,GO:0006777,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008146,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009108,GO:0009605,GO:0009607,GO:0009987,GO:0016053,GO:0016740,GO:0016772,GO:0016779,GO:0016782,GO:0018130,GO:0019344,GO:0019538,GO:0019637,GO:0019720,GO:0019752,GO:0020012,GO:0030312,GO:0030682,GO:0042783,GO:0043170,GO:0043207,GO:0043436,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0044403,GO:0044413,GO:0044415,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0050896,GO:0051186,GO:0051188,GO:0051189,GO:0051701,GO:0051704,GO:0051707,GO:0051805,GO:0051807,GO:0051810,GO:0051832,GO:0051834,GO:0052173,GO:0052200,GO:0052564,GO:0052572,GO:0061605,GO:0070566,GO:0071704,GO:0071944,GO:0075136,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.7.73,2.7.7.80,2.8.1.11 7.694e-194 627.0
BYD3_k127_3427256_10 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 - - 0.00000000000000000000000000000000003417 151.0
BYD3_k127_3427256_11 proteolysis - - - 0.000000000000000000000000000005443 135.0
BYD3_k127_3427256_12 - - - - 0.00000257 60.0
BYD3_k127_3427256_2 Domain of unknown function (DUF4153) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007124 596.0
BYD3_k127_3427256_3 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005121 537.0
BYD3_k127_3427256_4 Pyridoxal-phosphate dependent enzyme K12339 - 2.5.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004519 345.0
BYD3_k127_3427256_5 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008654 299.0
BYD3_k127_3427256_6 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000517 231.0
BYD3_k127_3427256_7 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000001774 188.0
BYD3_k127_3427256_8 Reversible hydration of carbon dioxide K01673 GO:0003674,GO:0003824,GO:0004089,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0008270,GO:0016020,GO:0016829,GO:0016835,GO:0016836,GO:0040007,GO:0043167,GO:0043169,GO:0044464,GO:0046872,GO:0046914,GO:0071944 4.2.1.1 0.000000000000000000000000000000000000000000000000001932 190.0
BYD3_k127_3427256_9 Necessary for normal cell division and for the maintenance of normal septation K03978 - - 0.000000000000000000000000000000000000000000000009135 198.0
BYD3_k127_3473131_0 Belongs to the GSP D family K02280 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001213 301.0
BYD3_k127_3473131_1 NUBPL iron-transfer P-loop NTPase K02282 - - 0.00000000000000000000000000000000000000000001599 179.0
BYD3_k127_3473131_2 PFAM SAF domain K02279 - - 0.00000000000000000000000000000000000000000007674 175.0
BYD3_k127_3473131_3 Putative Flp pilus-assembly TadE/G-like - - - 0.00000000000000000000000000000000000000001481 172.0
BYD3_k127_3473131_4 Type IV leader peptidase family K02278 - 3.4.23.43 0.00000000001263 73.0
BYD3_k127_3473131_5 TadE-like protein - - - 0.0000000001667 72.0
BYD3_k127_3510278_0 Belongs to the arginase family K01476 GO:0003674,GO:0003824,GO:0004053,GO:0006082,GO:0006520,GO:0006525,GO:0006807,GO:0008150,GO:0008152,GO:0009064,GO:0009987,GO:0016787,GO:0016810,GO:0016813,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0071704,GO:1901564,GO:1901605 3.5.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001896 353.0
BYD3_k127_3510278_1 Sodium/hydrogen exchanger family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006047 345.0
BYD3_k127_3510278_2 tRNA (Uracil-5-)-methyltransferase K03215 - 2.1.1.190 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003291 314.0
BYD3_k127_3510278_3 PFAM Carboxylyase-related protein K03182 - 4.1.1.98 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000287 275.0
BYD3_k127_3510278_4 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) K03183 - 2.1.1.163,2.1.1.201 0.0000000000000000000000000000000000000000000000000177 191.0
BYD3_k127_3510278_5 ECF sigma factor K03088 - - 0.0000000000000000000000000000000000000002395 158.0
BYD3_k127_3510278_6 NlpC P60 family - - - 0.00000000000000000000000000003937 134.0
BYD3_k127_3510278_7 Polymer-forming cytoskeletal - - - 0.00000000000000004743 96.0
BYD3_k127_3510278_8 Alpha beta hydrolase K01066 - - 0.00000000000008236 85.0
BYD3_k127_3510278_9 Tfp pilus assembly protein FimV - - - 0.00001029 57.0
BYD3_k127_351310_0 Protein of unknown function, DUF255 K06888 - - 0.0 1215.0
BYD3_k127_351310_1 Beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006453 315.0
BYD3_k127_351310_2 nucleotidyltransferase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001387 256.0
BYD3_k127_351310_3 LemA family K03744 - - 0.000000000000000000000000000000000000000000000000000000002411 219.0
BYD3_k127_351310_4 TPM domain K06872 - - 0.00000000000000000000000000000000000000000001528 178.0
BYD3_k127_351310_5 Belongs to the peptidase S8 family - - - 0.00000000000000000000000000000009777 144.0
BYD3_k127_351310_6 Peptidase family M9 N-terminal K01387 - 3.4.24.3 0.0000000000002379 84.0
BYD3_k127_351310_7 metallopeptidase activity K01113,K20274 - 3.1.3.1 0.0000000001053 75.0
BYD3_k127_351310_8 Belongs to the peptidase S1C family K04771 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005575,GO:0005623,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0016787,GO:0017171,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043170,GO:0044238,GO:0044464,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.21.107 0.00003424 53.0
BYD3_k127_3543789_0 TonB-dependent receptor K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002474 472.0
BYD3_k127_3543789_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001125 383.0
BYD3_k127_3543789_10 COG3039 Transposase and inactivated derivatives IS5 family K07481 - - 0.00000000000001269 85.0
BYD3_k127_3543789_12 Glycosyl transferase family 2 - - - 0.0000007696 61.0
BYD3_k127_3543789_2 TonB dependent receptor K02014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002719 359.0
BYD3_k127_3543789_3 DegT/DnrJ/EryC1/StrS aminotransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002626 284.0
BYD3_k127_3543789_4 PFAM Adenylate and Guanylate cyclase catalytic domain - - - 0.0000000000000000000000000000000000000000000000000004279 205.0
BYD3_k127_3543789_5 Methylase of polypeptide chain release - - - 0.0000000000000000000000000000000000008739 153.0
BYD3_k127_3543789_6 Oxidoreductase family, C-terminal alpha/beta domain - - - 0.0000000000000000000000000000001729 138.0
BYD3_k127_3543789_7 NAD-dependent epimerase dehydratase K18981 - 1.1.1.203 0.000000000000000000000000000001462 130.0
BYD3_k127_3543789_8 Glycosyl transferase, family 2 - - - 0.0000000000000000000000004549 117.0
BYD3_k127_3543789_9 - - - - 0.0000000000000001779 88.0
BYD3_k127_3650154_0 Malic enzyme, NAD binding domain K00029 - 1.1.1.40 4.797e-291 912.0
BYD3_k127_3650154_1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 2.559e-234 748.0
BYD3_k127_3650154_10 - - - - 0.0000000000000000000000001002 108.0
BYD3_k127_3650154_11 Belongs to the NiCoT transporter (TC 2.A.52) family - - - 0.00000000000000000000008099 109.0
BYD3_k127_3650154_12 Pathogenicity protein K09800 - - 0.00000000000000000000511 111.0
BYD3_k127_3650154_13 Transglycosylase associated protein - - - 0.0000000000000000007326 90.0
BYD3_k127_3650154_14 von Willebrand factor, type A - - - 0.00000000001537 78.0
BYD3_k127_3650154_15 PhoQ Sensor - - - 0.00008895 56.0
BYD3_k127_3650154_2 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002327 459.0
BYD3_k127_3650154_3 phosphorelay signal transduction system K02481 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002504 418.0
BYD3_k127_3650154_4 Belongs to the peptidase M48B family K03799 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006696 334.0
BYD3_k127_3650154_5 Hexapeptide repeat of succinyl-transferase - - - 0.0000000000000000000000000000000000000000000000000000000000002411 222.0
BYD3_k127_3650154_6 Surface antigen K07277 - - 0.0000000000000000000000000000000000000000000000000000000002071 232.0
BYD3_k127_3650154_7 AI-2E family transporter - - - 0.000000000000000000000000000000000000000006915 178.0
BYD3_k127_3650154_8 PQQ enzyme repeat K05889,K12132 - 1.1.2.6,2.7.11.1 0.000000000000000000000000000000000000008078 167.0
BYD3_k127_3650154_9 Virulence factor BrkB K07058 - - 0.000000000000000000000000000002809 139.0
BYD3_k127_3683802_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 GO:0003674,GO:0003824,GO:0004812,GO:0004829,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006435,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.3 8.604e-240 758.0
BYD3_k127_3683802_1 phenylalanyl-tRNA synthetase (beta subunit) K01890 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 6.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003065 512.0
BYD3_k127_3683802_2 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 - 6.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002624 378.0
BYD3_k127_3683802_3 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 - - 0.00000000000000000000000000000000000000000000000000000000002502 213.0
BYD3_k127_3683802_4 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 - - 0.00000000000000000000000000000000000003892 146.0
BYD3_k127_3683802_5 Belongs to the bacterial ribosomal protein bL35 family K02916 - - 0.000000000001483 71.0
BYD3_k127_3683802_6 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.00000001594 59.0
BYD3_k127_3702796_0 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.99.17 1.97e-251 790.0
BYD3_k127_3702796_1 Flavin containing amine oxidoreductase - - - 4.619e-218 691.0
BYD3_k127_3702796_2 amino acid K03294,K13868 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002708 394.0
BYD3_k127_3702796_3 Belongs to the GcvT family K00605 - 2.1.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000373 355.0
BYD3_k127_3782730_0 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009338 538.0
BYD3_k127_3782730_1 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity K07456 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000113 446.0
BYD3_k127_3782730_10 Uncharacterized protein family UPF0029 - - - 0.00000000000000000805 98.0
BYD3_k127_3782730_11 holo-[acyl-carrier-protein] synthase activity K00997,K18014 - 2.7.8.7,4.3.1.14 0.000000000000001222 90.0
BYD3_k127_3782730_2 Belongs to the Glu Leu Phe Val dehydrogenases family K00263 - 1.4.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001482 411.0
BYD3_k127_3782730_3 PFAM 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K00074 - 1.1.1.157 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001936 321.0
BYD3_k127_3782730_4 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007994 313.0
BYD3_k127_3782730_5 Hit family K02503 - - 0.00000000000000000000000000000000000884 149.0
BYD3_k127_3782730_6 Catalyzes the dephosphorylation of D,L-glyceraldehyde 3- phosphate in vitro K07025 - - 0.00000000000000000000000000003663 128.0
BYD3_k127_3782730_7 Yqey-like protein K09117 - - 0.000000000000000000000000001568 124.0
BYD3_k127_3782730_8 - - - - 0.0000000000000000000000000301 108.0
BYD3_k127_3782730_9 - - - - 0.00000000000000000000000006446 116.0
BYD3_k127_3785233_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 1.14e-250 812.0
BYD3_k127_3785233_1 sigma factor activity K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000579 587.0
BYD3_k127_3785233_10 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003188 290.0
BYD3_k127_3785233_11 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 - - 0.0000000000000000000000000000000000000000000000000000000000000000001815 251.0
BYD3_k127_3785233_12 YCII-related domain - - - 0.000000000000000000000000000000000000000000000000000000000000000003677 231.0
BYD3_k127_3785233_13 Catalyzes the synthesis of activated sulfate K00390,K00860,K00958,K13811 GO:0000096,GO:0000103,GO:0003674,GO:0003824,GO:0004020,GO:0004779,GO:0004781,GO:0006082,GO:0006520,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010134,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016779,GO:0019379,GO:0019419,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0055114,GO:0070566,GO:0071704,GO:1901564 1.8.4.10,1.8.4.8,2.7.1.25,2.7.7.4 0.0000000000000000000000000000000000000000000000000000000006831 214.0
BYD3_k127_3785233_14 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 - - 0.00000000000000000000000000000000000000000000000000001554 197.0
BYD3_k127_3785233_15 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0019538,GO:0022625,GO:0022626,GO:0030312,GO:0032991,GO:0034641,GO:0034645,GO:0040007,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000001531 180.0
BYD3_k127_3785233_16 PFAM Glyoxalase bleomycin resistance protein dioxygenase K04750 - - 0.000000000000000000000000000000000000000000000003133 177.0
BYD3_k127_3785233_17 membrane - - - 0.000000000000000000000000000000000000000000006848 183.0
BYD3_k127_3785233_18 Regulator of peptidoglycan synthesis that is essential for the function of penicillin-binding protein 1B (PBP1b) K07337,K21008 GO:0000270,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008047,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009279,GO:0009987,GO:0016020,GO:0019867,GO:0019899,GO:0030203,GO:0030234,GO:0030312,GO:0030313,GO:0031241,GO:0031975,GO:0034645,GO:0042546,GO:0043085,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044093,GO:0044237,GO:0044249,GO:0044260,GO:0044425,GO:0044462,GO:0044464,GO:0050790,GO:0065007,GO:0065009,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:0071944,GO:0098552,GO:0098772,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000004899 171.0
BYD3_k127_3785233_19 Glyoxalase-like domain - - - 0.000000000000000000000000000000000001001 154.0
BYD3_k127_3785233_2 Belongs to the sulfate adenylyltransferase family K00958 - 2.7.7.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005334 439.0
BYD3_k127_3785233_20 Maf-like protein K06287 - - 0.000000000000000000000000000000000002504 151.0
BYD3_k127_3785233_21 protein conserved in bacteria - - - 0.0000000000000000000000000000000001866 139.0
BYD3_k127_3785233_22 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.000000000000000000000000000000000397 138.0
BYD3_k127_3785233_23 Cytidylyltransferase family K00981 - 2.7.7.41 0.00000000000000000000000000000002143 144.0
BYD3_k127_3785233_24 Transcription elongation factor, N-terminal K03624 - - 0.000000000000000000000000000152 127.0
BYD3_k127_3785233_25 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 GO:0002161,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006399,GO:0006450,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0034641,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0051499,GO:0051500,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:1901360 - 0.000000000000000000000000001063 120.0
BYD3_k127_3785233_26 YCII-related domain - - - 0.00000000000000000000000008614 115.0
BYD3_k127_3785233_27 Peptidase family M50 K11749 - - 0.0000000000000000000000224 111.0
BYD3_k127_3785233_28 Short-chain dehydrogenase reductase sdr K00065 - 1.1.1.127 0.00000000000000000000005907 106.0
BYD3_k127_3785233_29 Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006979,GO:0008150,GO:0009987,GO:0033554,GO:0034599,GO:0042221,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051716,GO:0070887 - 0.0000000000000006607 81.0
BYD3_k127_3785233_3 Phosphoglucomutase/phosphomannomutase, C-terminal domain K01840 - 5.4.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000836 377.0
BYD3_k127_3785233_30 protein conserved in bacteria K09859 - - 0.000000002695 70.0
BYD3_k127_3785233_31 PFAM metal-dependent phosphohydrolase, HD sub domain - - - 0.00000001251 64.0
BYD3_k127_3785233_32 - - - - 0.000001289 51.0
BYD3_k127_3785233_4 Transporter associated domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008854 353.0
BYD3_k127_3785233_5 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001055 342.0
BYD3_k127_3785233_6 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002004 307.0
BYD3_k127_3785233_7 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS K03151 - 2.8.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004005 319.0
BYD3_k127_3785233_8 Belongs to the universal ribosomal protein uS2 family K02967 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006543 284.0
BYD3_k127_3785233_9 Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine K04487 - 2.8.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007169 292.0
BYD3_k127_3820893_0 Myo-inositol-1-phosphate synthase K01858 - 5.5.1.4 6.509e-198 639.0
BYD3_k127_3820893_1 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001712 377.0
BYD3_k127_3820893_2 GMC oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000005715 237.0
BYD3_k127_3820893_3 ZIP Zinc transporter K07238,K11021,K16267 - - 0.0000000000000000000000000000000000000000000000000000000007022 213.0
BYD3_k127_3820893_4 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 - 2.7.4.9 0.000000000000000000000000000000000000000000000000000005519 199.0
BYD3_k127_3820893_5 Serine aminopeptidase, S33 - - - 0.000000000000000000000000000000000000000000000000005964 209.0
BYD3_k127_3820893_6 CDP-alcohol phosphatidyltransferase K00995 - 2.7.8.5 0.0000000000000000000000000000000000002733 149.0
BYD3_k127_3820893_7 protein kinase activity K12132 - 2.7.11.1 0.000000000000000000000000000000002091 151.0
BYD3_k127_3851312_0 Aconitase C-terminal domain K01681 - 4.2.1.3 2.49e-233 738.0
BYD3_k127_3851312_1 AAA-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004534 567.0
BYD3_k127_3851312_10 RibD C-terminal domain - - - 0.0000000000000000000000000000000000000000000000001872 181.0
BYD3_k127_3851312_11 RibD C-terminal domain - - - 0.00000000000000000000000000000000000000000000009482 187.0
BYD3_k127_3851312_12 SnoaL-like polyketide cyclase - - - 0.000000000000000000000000000000000002402 145.0
BYD3_k127_3851312_13 epimerase dehydratase - - - 0.00000000000000000000000000000000009981 154.0
BYD3_k127_3851312_14 Predicted integral membrane protein (DUF2269) - - - 0.000000000000000000000003949 109.0
BYD3_k127_3851312_15 - - - - 0.000000000000000000000005938 115.0
BYD3_k127_3851312_16 Prephenate dehydratase K04518 - 4.2.1.51 0.000000000000000000001438 110.0
BYD3_k127_3851312_17 PFAM Acetyltransferase (GNAT) family - - - 0.00000000000000000003682 104.0
BYD3_k127_3851312_18 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.00005036 55.0
BYD3_k127_3851312_2 Acyl-CoA dehydrogenase, C-terminal domain K00248 - 1.3.8.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002656 517.0
BYD3_k127_3851312_3 PFAM DAHP synthetase I KDSA K03856 - 2.5.1.54 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000145 406.0
BYD3_k127_3851312_4 amine dehydrogenase activity K17285 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009009 288.0
BYD3_k127_3851312_5 SMART PDZ DHR GLGF domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000014 291.0
BYD3_k127_3851312_6 Putative cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000007342 293.0
BYD3_k127_3851312_7 5'-3' exonuclease - GO:0005575,GO:0005618,GO:0005623,GO:0030312,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000006359 249.0
BYD3_k127_3851312_8 Cation efflux family K16264 GO:0000041,GO:0003674,GO:0005215,GO:0005385,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006829,GO:0008150,GO:0008324,GO:0015075,GO:0015318,GO:0016020,GO:0022857,GO:0022890,GO:0030001,GO:0034220,GO:0044464,GO:0046873,GO:0046915,GO:0051179,GO:0051234,GO:0055085,GO:0070838,GO:0071577,GO:0071944,GO:0072509,GO:0072511,GO:0098655,GO:0098660,GO:0098662 - 0.000000000000000000000000000000000000000000000000000000000000000000001436 261.0
BYD3_k127_3851312_9 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000000000001312 199.0
BYD3_k127_3862571_0 Transglycosylase K05365 - 2.4.1.129,3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008395 565.0
BYD3_k127_3862571_1 Pyridoxal-phosphate dependent enzyme K01754 - 4.3.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005963 408.0
BYD3_k127_3862571_2 COG1473 Metal-dependent amidase aminoacylase carboxypeptidase K01436 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008965 392.0
BYD3_k127_3862571_3 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 GO:0003674,GO:0003824,GO:0004719,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0010340,GO:0016740,GO:0016741,GO:0019538,GO:0032259,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0051998,GO:0071704,GO:0140096,GO:1901564 2.1.1.77 0.00000000000000000000000000000000000000000000000000000000000000000004248 238.0
BYD3_k127_3862571_4 CAAX prenyl protease N-terminal, five membrane helices K06013 - 3.4.24.84 0.0000000000000000000000000000000000000000000000000000006795 219.0
BYD3_k127_3862571_5 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000000000000000000004202 110.0
BYD3_k127_3910027_0 TIGRFAM phosphate binding protein K02040 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001031 407.0
BYD3_k127_3910027_1 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007271 361.0
BYD3_k127_3910027_2 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007879 368.0
BYD3_k127_3910027_3 TIGRFAM phosphate ABC transporter, inner membrane subunit PstA K02038 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008944 348.0
BYD3_k127_3910027_4 Phosphate sensor histidine kinase, HAMP and PAS domain-containing K07636 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000178 329.0
BYD3_k127_3910027_5 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.0000000000000000000000000000000000000000000000000000000000000002822 224.0
BYD3_k127_3910027_6 Plays a role in the regulation of phosphate uptake K02039 - - 0.0000000000000000000000000000000000000000000000004812 194.0
BYD3_k127_3910027_7 - - - - 0.000265 55.0
BYD3_k127_3918496_0 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated K10778 - 2.1.1.63 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001626 377.0
BYD3_k127_3918496_1 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03182 - 4.1.1.98 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003492 289.0
BYD3_k127_3918496_2 UbiA prenyltransferase family K03179 - 2.5.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000008122 252.0
BYD3_k127_3918496_3 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 - 2.5.1.129 0.000000000000000000000000000000000000000000000002657 196.0
BYD3_k127_3918496_4 Ferredoxin - - - 0.000000000000000000000000000000000000000001125 169.0
BYD3_k127_3919856_0 impB/mucB/samB family C-terminal domain K02346 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001058 327.0
BYD3_k127_3919856_1 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003822 271.0
BYD3_k127_3919856_2 UbiA prenyltransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001902 279.0
BYD3_k127_3919856_3 methionine sulfoxide reductase K07305 - 1.8.4.12 0.00000000000000000000000000000000000000000000000000000000000005621 218.0
BYD3_k127_3919856_4 - - - - 0.000000000000000000000000000000000000000000000000000009652 198.0
BYD3_k127_3919856_5 amine dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000001997 198.0
BYD3_k127_3919856_6 FR47-like protein K03825 - - 0.00000000000000000000000000001248 134.0
BYD3_k127_3928953_0 TonB dependent receptor - - - 1.24e-268 856.0
BYD3_k127_3928953_1 SusD family K21572 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006356 375.0
BYD3_k127_3928953_2 Membrane protein involved in the export of O-antigen and teichoic acid - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001761 375.0
BYD3_k127_3928953_3 ATPases associated with a variety of cellular activities K02049 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001203 266.0
BYD3_k127_3928953_4 amino acid K03294,K13868 - - 0.00000000000000000000000000000000000000000000000000000000000001426 232.0
BYD3_k127_3928953_5 ABC-type nitrate sulfonate bicarbonate transport system permease component K02050 - - 0.000000000000000000000000000000000000000000000000000001263 213.0
BYD3_k127_3928953_6 Sigma-70, region 4 - - - 0.0000000000000000000000000000000000009777 145.0
BYD3_k127_3928953_7 NMT1-like family K02051 - - 0.00000000000002579 87.0
BYD3_k127_3928953_8 AntiSigma factor - - - 0.00000000008622 74.0
BYD3_k127_3965584_0 TIGRFAM acetyl-CoA carboxylase, biotin carboxylase K01961 - 6.3.4.14,6.4.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002999 563.0
BYD3_k127_3965584_1 Ftsk_gamma K03466 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003073 520.0
BYD3_k127_3965584_2 Type II/IV secretion system protein K02669 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001004 418.0
BYD3_k127_3965584_3 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735,K13829 - 2.7.1.71,4.2.3.4 0.0000000000000000000000000000000000000000000000000000000000000000001666 242.0
BYD3_k127_3965584_4 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 - - 0.0000000000000000000000000000000000000000000000000000000000000000502 238.0
BYD3_k127_3965584_5 Biotin-requiring enzyme K02160 - - 0.000000000000000000000000000000000000000188 157.0
BYD3_k127_3965584_6 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.0000000000000000000000000000000000002592 159.0
BYD3_k127_3965584_7 Tetratricopeptide repeat - - - 0.00000000000009976 83.0
BYD3_k127_3977211_0 ABC transporter K06158 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001018 606.0
BYD3_k127_3977211_1 Peptidase family M28 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001336 581.0
BYD3_k127_3977211_10 Domain of unknown function (DUF892) - - - 0.000000000000000000000000000000004606 138.0
BYD3_k127_3977211_11 polysaccharide biosynthetic process - - - 0.0000000000000000000000001642 121.0
BYD3_k127_3977211_12 SMART PDZ DHR GLGF domain protein - - - 0.0000000000000001707 92.0
BYD3_k127_3977211_13 - - - - 0.0000000000000002294 86.0
BYD3_k127_3977211_14 metalloendopeptidase activity - - - 0.000000000000743 79.0
BYD3_k127_3977211_16 ABC transporter K06158 - - 0.0000004852 53.0
BYD3_k127_3977211_17 - - - - 0.0000009415 57.0
BYD3_k127_3977211_18 Putative peptidoglycan binding domain - - - 0.00008582 55.0
BYD3_k127_3977211_2 two-component system sensor protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001952 584.0
BYD3_k127_3977211_3 Peptidase dimerisation domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003733 563.0
BYD3_k127_3977211_4 ATP-grasp domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001535 577.0
BYD3_k127_3977211_5 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000026 365.0
BYD3_k127_3977211_6 Involved in the tonB-independent uptake of proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008782 340.0
BYD3_k127_3977211_7 Uncharacterised ACR (DUF711) K09157 - - 0.0000000000000000000000000000000000000000000000000000000000000000000008674 254.0
BYD3_k127_3977211_8 Glycosyl transferase family group 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000001125 246.0
BYD3_k127_3977211_9 Sulfotransferase domain - - - 0.00000000000000000000000000000000000000000000007544 184.0
BYD3_k127_4120936_0 Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling K07106,K09001 GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0044237 2.7.1.170,4.2.1.126 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003699 313.0
BYD3_k127_4120936_1 Domain of unknown function (DUF3471) K06889 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004065 302.0
BYD3_k127_4120936_2 Lysin motif K08307 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005824 298.0
BYD3_k127_4120936_3 Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate K07106 - 4.2.1.126 0.0000000000000000000000000000000000000000000000000000000000000000000000000007233 265.0
BYD3_k127_4120936_4 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003085 256.0
BYD3_k127_4120936_5 PFAM glycoside hydrolase, family 3 domain protein K01207 - 3.2.1.52 0.000000000000000000000000000000000000000000000000000000000002046 237.0
BYD3_k127_4120936_6 Thioredoxin-like domain K03672 - 1.8.1.8 0.0000000000000000000000000000000000000001989 154.0
BYD3_k127_4179570_0 Receptor family ligand binding region K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003603 534.0
BYD3_k127_4179570_1 Aldo/keto reductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000181 487.0
BYD3_k127_4179570_10 hyperosmotic response - - - 0.00000000000000000000000000000000000000000000002711 180.0
BYD3_k127_4179570_11 - - - - 0.0000000000000000000000000000000000000000000004998 188.0
BYD3_k127_4179570_12 deoxyribonuclease V activity K05982 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006259,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016788,GO:0016888,GO:0016893,GO:0034641,GO:0043170,GO:0043737,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360 3.1.21.7 0.000000000000000000000000000000000000003134 167.0
BYD3_k127_4179570_13 Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP K01496 - 3.5.4.19 0.00000000000000000000000000000000008771 146.0
BYD3_k127_4179570_14 Domain of unknown function (DUF4112) - - - 0.00000000000000000000000000000002358 134.0
BYD3_k127_4179570_15 Branched-chain amino acid transport system / permease component K01997 - - 0.000000000000000000001144 111.0
BYD3_k127_4179570_16 PFAM ATP phosphoribosyltransferase - - - 0.000000000000000000002302 106.0
BYD3_k127_4179570_17 Cupin domain - - - 0.00000001672 60.0
BYD3_k127_4179570_2 COG1275 Tellurite resistance protein and related permeases K03304 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003601 409.0
BYD3_k127_4179570_3 Sir2 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004169 369.0
BYD3_k127_4179570_4 Glycine cleavage H-protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001367 339.0
BYD3_k127_4179570_5 Acetoacetate decarboxylase (ADC) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003008 342.0
BYD3_k127_4179570_6 PFAM Glyoxalase bleomycin resistance protein dioxygenase K04750 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000007622 269.0
BYD3_k127_4179570_7 Adenosine specific kinase K09129 - - 0.00000000000000000000000000000000000000000000000000000000000000000001237 243.0
BYD3_k127_4179570_8 COG0526, thiol-disulfide isomerase and thioredoxins - - - 0.00000000000000000000000000000000000000000000000000000000000002854 224.0
BYD3_k127_4179570_9 PFAM Antibiotic biosynthesis monooxygenase - - - 0.00000000000000000000000000000000000000000000000000000001712 197.0
BYD3_k127_4228790_0 Sodium:sulfate symporter transmembrane region K14445 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009403 433.0
BYD3_k127_4228790_1 Metallo-beta-lactamase superfamily K06897 - 2.5.1.105 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001035 396.0
BYD3_k127_4228790_2 peptidase - - - 0.000000000000000000000000000000000000000000000000004071 189.0
BYD3_k127_4228790_3 Haem-degrading - - - 0.000000000000000000000000000000000000000002519 168.0
BYD3_k127_4233018_0 Methylenetetrahydrofolate reductase K00297,K00547 - 1.5.1.20,2.1.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003671 568.0
BYD3_k127_4233018_1 LytB protein K03527 - 1.17.7.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002552 477.0
BYD3_k127_4233018_2 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation K00549 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0003871,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006464,GO:0006479,GO:0006520,GO:0006555,GO:0006575,GO:0006725,GO:0006730,GO:0006732,GO:0006760,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008172,GO:0008213,GO:0008276,GO:0008652,GO:0008705,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016020,GO:0016053,GO:0016740,GO:0016741,GO:0019538,GO:0019752,GO:0030312,GO:0032259,GO:0034641,GO:0035999,GO:0036211,GO:0040007,GO:0042084,GO:0042085,GO:0042558,GO:0043170,GO:0043412,GO:0043414,GO:0043436,GO:0043603,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046653,GO:0050667,GO:0051186,GO:0071704,GO:0071944,GO:0140096,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003295 370.0
BYD3_k127_4233018_3 MotA/TolQ/ExbB proton channel family K03562 - - 0.0000000000000000000000000000000000000000000000000000000000002017 222.0
BYD3_k127_4233018_4 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation K00549 - 2.1.1.14 0.000000000000000000000000000000000000000000000000000004175 205.0
BYD3_k127_4233018_5 Biopolymer transport protein ExbD/TolR K03560 - - 0.0000000000000000000000000000000000004122 147.0
BYD3_k127_4233018_6 ACT domain protein - - - 0.000000000000000002526 91.0
BYD3_k127_4233018_7 Gram-negative bacterial TonB protein C-terminal - - - 0.000000717 61.0
BYD3_k127_4263119_0 Amino acid permease K03294 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004084 570.0
BYD3_k127_4263119_1 Carbon starvation protein K06200 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004645 507.0
BYD3_k127_4263119_2 Carbohydrate family 9 binding domain-like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002128 361.0
BYD3_k127_4263119_3 Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation K02232 - 6.3.5.10 0.000000000000000000000000000000000003685 156.0
BYD3_k127_4263119_4 Carboxylesterase family - - - 0.00000000000000000000000000000000324 145.0
BYD3_k127_4263119_5 alpha-ribazole phosphatase activity K01834,K02226,K15634,K22305 - 3.1.3.3,3.1.3.73,5.4.2.11,5.4.2.12 0.00000000000000000000000004889 125.0
BYD3_k127_4263119_6 Sporulation protein YtfJ (Spore_YtfJ) - - - 0.000000000000000000001167 102.0
BYD3_k127_4263119_7 methyltransferase - - - 0.00000000000000000000402 104.0
BYD3_k127_4331020_0 Aldehyde dehydrogenase family K22187 - - 4.456e-206 652.0
BYD3_k127_4331020_1 phosphorelay signal transduction system - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001393 466.0
BYD3_k127_4331020_2 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007918 438.0
BYD3_k127_4331020_3 Signal peptidase, peptidase S26 K03100 - 3.4.21.89 0.0000000000000000000000000000000000000000000000000000000000001592 225.0
BYD3_k127_4331020_4 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03437 - - 0.00000000000000000000000000000000000000000001839 174.0
BYD3_k127_4331020_5 Thioesterase family - - - 0.0000000000000000000000000000000000001571 164.0
BYD3_k127_4362522_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 - 6.1.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007294 439.0
BYD3_k127_4362522_1 Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily K17828 - 1.3.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004038 294.0
BYD3_k127_4362522_2 orotate phosphoribosyltransferase activity K00762 - 2.4.2.10 0.00000000000000000000000000000000000000000000003004 187.0
BYD3_k127_4362522_3 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 - 4.1.1.23 0.00000000000000000000000000000000000000009431 171.0
BYD3_k127_4362522_4 PFAM oxidoreductase FAD NAD(P)-binding domain protein K02823 - - 0.0000000000000000000000000000000000005241 154.0
BYD3_k127_4362522_5 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.000000000000000000000000000000001018 130.0
BYD3_k127_4362522_6 - - - - 0.00000001143 61.0
BYD3_k127_4377356_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 3.072e-288 902.0
BYD3_k127_4377356_1 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 5.872e-227 724.0
BYD3_k127_4377356_10 PFAM Mechanosensitive ion channel - - - 0.0000000000000000000000000000000000001623 154.0
BYD3_k127_4377356_11 N-acetylmuramoyl-L-alanine amidase - - - 0.0000000000000000000000000000000002057 154.0
BYD3_k127_4377356_12 PFAM Uncharacterised P-loop hydrolase UPF0079 K06925 - - 0.0000000000000000000000001386 121.0
BYD3_k127_4377356_13 cheY-homologous receiver domain - - - 0.0000000000000000000000001503 112.0
BYD3_k127_4377356_14 Glycosyl transferase 4-like domain K03525 - 2.7.1.33 0.0000000000000000002625 104.0
BYD3_k127_4377356_15 Glycosyltransferase WbsX - - - 0.00000000000005144 86.0
BYD3_k127_4377356_16 COG1214 Inactive homolog of metal-dependent proteases K14742 - - 0.0000000000001895 81.0
BYD3_k127_4377356_17 - - - - 0.0000000000006983 83.0
BYD3_k127_4377356_2 PAS fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003982 492.0
BYD3_k127_4377356_3 COG2114 Adenylate cyclase, family 3 (some proteins contain HAMP domain) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001145 376.0
BYD3_k127_4377356_4 Belongs to the bacterial solute-binding protein 9 family K02077,K09815,K09818 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004821 281.0
BYD3_k127_4377356_5 Pyridine nucleotide-disulphide oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000001694 188.0
BYD3_k127_4377356_6 Belongs to the UPF0758 family K03630 - - 0.0000000000000000000000000000000000000000000000000004318 198.0
BYD3_k127_4377356_7 ABC 3 transport family K02075 - - 0.000000000000000000000000000000000000000000000005401 196.0
BYD3_k127_4377356_8 Tfp pilus assembly protein FimV - - - 0.00000000000000000000000000000000000000000000001444 192.0
BYD3_k127_4377356_9 - - - - 0.00000000000000000000000000000000000000000006978 182.0
BYD3_k127_4398997_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002478 524.0
BYD3_k127_4398997_1 Deoxyribodipyrimidine photo-lyase K01669 - 4.1.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007482 522.0
BYD3_k127_4398997_10 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily K03216 - 2.1.1.207 0.00000000000000000000000000000000001421 153.0
BYD3_k127_4398997_11 - - - - 0.00000000000000000000000000007246 128.0
BYD3_k127_4398997_13 Zincin-like metallopeptidase - - - 0.0000000000000000000002696 106.0
BYD3_k127_4398997_14 - - - - 0.0000000000006446 82.0
BYD3_k127_4398997_15 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.00001643 49.0
BYD3_k127_4398997_16 CHAP domain - - - 0.00002222 58.0
BYD3_k127_4398997_17 Protein of unknown function with HXXEE motif - - - 0.00009202 51.0
BYD3_k127_4398997_18 DoxX - - - 0.0006281 49.0
BYD3_k127_4398997_2 TonB-dependent receptor K02014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000394 448.0
BYD3_k127_4398997_3 D-isomer specific 2-hydroxyacid dehydrogenase catalytic region K00058 - 1.1.1.399,1.1.1.95 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005043 398.0
BYD3_k127_4398997_4 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003886 378.0
BYD3_k127_4398997_5 calcium, potassium:sodium antiporter activity K07301 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001575 316.0
BYD3_k127_4398997_6 Aminotransferase class-V - - - 0.000000000000000000000000000000000000000000000000000000000000000000005038 255.0
BYD3_k127_4398997_7 amine dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000001665 221.0
BYD3_k127_4398997_8 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.00000000000000000000000000000000000000000000000000002161 208.0
BYD3_k127_4398997_9 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K03601,K04564 GO:0000302,GO:0000303,GO:0000305,GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0004784,GO:0005488,GO:0005506,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006801,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009266,GO:0009268,GO:0009405,GO:0009408,GO:0009605,GO:0009607,GO:0009628,GO:0009636,GO:0009987,GO:0010035,GO:0010038,GO:0010039,GO:0010269,GO:0010447,GO:0016020,GO:0016209,GO:0016491,GO:0016721,GO:0019430,GO:0020012,GO:0030145,GO:0030682,GO:0033554,GO:0034599,GO:0034614,GO:0042221,GO:0042597,GO:0043167,GO:0043169,GO:0043207,GO:0044237,GO:0044403,GO:0044413,GO:0044415,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0050896,GO:0051701,GO:0051704,GO:0051707,GO:0051716,GO:0051805,GO:0051807,GO:0051832,GO:0051834,GO:0052059,GO:0052173,GO:0052200,GO:0052385,GO:0052550,GO:0052564,GO:0052567,GO:0052572,GO:0055114,GO:0070887,GO:0071241,GO:0071248,GO:0071281,GO:0071291,GO:0071450,GO:0071451,GO:0071944,GO:0072593,GO:0075136,GO:0097159,GO:0097237,GO:0098754,GO:0098869,GO:1901363,GO:1901700,GO:1901701,GO:1990748 1.15.1.1,3.1.11.6 0.00000000000000000000000000000000000002501 153.0
BYD3_k127_440693_0 protoporphyrinogen oxidase activity K01854 - 5.4.99.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003088 576.0
BYD3_k127_440693_1 transferase activity, transferring glycosyl groups - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006204 346.0
BYD3_k127_440693_2 protein conserved in bacteria - - - 0.00000000000000000000000000000000000003636 148.0
BYD3_k127_440693_3 Protein of unknown function (DUF2630) - - - 0.00000000000005757 77.0
BYD3_k127_440693_4 protein trimerization - - - 0.0000000004059 72.0
BYD3_k127_4415699_0 Aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004755 571.0
BYD3_k127_4415699_1 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.0000000000000000000000000000000178 145.0
BYD3_k127_4415699_2 Rhs family - - - 0.00003453 51.0
BYD3_k127_4415699_3 regulator of chromosome condensation, RCC1 - - - 0.0004424 52.0
BYD3_k127_4497114_0 Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family K03317 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002192 430.0
BYD3_k127_4497114_1 SNARE associated Golgi protein K03975,K19302 - 3.6.1.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004934 278.0
BYD3_k127_4497114_2 The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate K00772,K03783 - 2.4.2.1,2.4.2.28 0.00000000000000000000000000000000000000000000000000000000000000000902 245.0
BYD3_k127_4497114_3 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.000000000000000000000000000000000000000000004011 173.0
BYD3_k127_4497114_4 adenosine deaminase K01488,K21053 - 3.5.4.2,3.5.4.4 0.0000000000000000000000000000000000000002593 171.0
BYD3_k127_4504321_0 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001146 394.0
BYD3_k127_4504321_1 2-epimerase K16213 - 5.1.3.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005286 373.0
BYD3_k127_4504321_2 AAA domain, putative AbiEii toxin, Type IV TA system K09695 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004476 319.0
BYD3_k127_4504321_3 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007467 289.0
BYD3_k127_4504321_4 ABC-2 type transporter K09694 - - 0.0000000000000000000000000000000000000000000000000000000004421 217.0
BYD3_k127_4504321_5 Periplasmic binding protein K02016 - - 0.000000000000000000000000000000000000000000000000000689 209.0
BYD3_k127_4504321_6 Domain of unknown function (DUF4081) K06976 - - 0.000000000000000000000000001202 127.0
BYD3_k127_4504321_8 - - - - 0.00000000000000004988 89.0
BYD3_k127_4504321_9 bacterial OsmY and nodulation domain K04065 GO:0005575,GO:0005623,GO:0006457,GO:0006950,GO:0006970,GO:0006972,GO:0008150,GO:0009628,GO:0009987,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0044464,GO:0050896,GO:0061077 - 0.0009117 51.0
BYD3_k127_454636_0 Sodium:sulfate symporter transmembrane region K14445 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002407 398.0
BYD3_k127_454636_1 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001154 375.0
BYD3_k127_454636_2 Biotin/lipoate A/B protein ligase family K03801 - 2.3.1.181 0.000000000000000000000000000000000000000000000000000000000154 225.0
BYD3_k127_454636_3 Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene K03664 GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0070930,GO:0071704,GO:1901564 - 0.00000000000000000000000000000000000000000000000001572 184.0
BYD3_k127_454636_4 Uncharacterized conserved protein (DUF2203) - - - 0.000000000000000009875 97.0
BYD3_k127_454636_5 response to stress - - - 0.000000000000000215 94.0
BYD3_k127_4577740_0 Sulfotransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002751 343.0
BYD3_k127_4577740_1 Sulfotransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004958 316.0
BYD3_k127_4577740_2 Glycosyl transferase 4-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003676 258.0
BYD3_k127_4577740_3 Sulfo-transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000009141 248.0
BYD3_k127_4577740_4 Sulfotransferase domain - - - 0.000000000000000000000000000000000000000000000000000001047 209.0
BYD3_k127_4577740_5 Sulfotransferase family - - - 0.0000000000000000000000000002518 126.0
BYD3_k127_4577740_6 Sulfotransferase domain - - - 0.0000000000000000000003983 110.0
BYD3_k127_4577740_7 alginic acid biosynthetic process - - - 0.000000002743 71.0
BYD3_k127_4593440_0 Saccharopine dehydrogenase C-terminal domain K19064 - 1.4.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009529 358.0
BYD3_k127_4593440_1 PFAM Alcohol dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001054 343.0
BYD3_k127_4593440_2 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00658 - 2.3.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004188 298.0
BYD3_k127_4593440_3 Calcineurin-like phosphoesterase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001135 282.0
BYD3_k127_4593440_4 Proline dehydrogenase K00318 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000009278 275.0
BYD3_k127_4593440_5 Glycerophosphoryl diester phosphodiesterase family K01126 - 3.1.4.46 0.000000000000000000000000000000000000000002526 173.0
BYD3_k127_4593440_6 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides K08281 - 3.5.1.19 0.000000000000000000000000000000005648 136.0
BYD3_k127_4593440_7 PFAM BioY protein K03523 - - 0.0000000000000000000001629 106.0
BYD3_k127_4593440_8 - - - - 0.00000005162 62.0
BYD3_k127_4615934_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 1.246e-250 817.0
BYD3_k127_4615934_1 Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) K00097 - 1.1.1.262 0.00000000000000000000000000000000000000000000000000000000000000005469 253.0
BYD3_k127_4615934_2 Serine aminopeptidase, S33 - - - 0.000000000000000000000000000000000000000000000000001601 192.0
BYD3_k127_4615934_3 SurA N-terminal domain K03771 - 5.2.1.8 0.00000000000000000000000000000000000000001003 174.0
BYD3_k127_4615934_4 ABC transporter K09812 - - 0.00000000000000000000000003466 124.0
BYD3_k127_4615934_5 PFAM PpiC-type peptidyl-prolyl cis-trans isomerase K03769 - 5.2.1.8 0.0000000000000000000000004046 122.0
BYD3_k127_4623897_0 Prolyl oligopeptidase, N-terminal beta-propeller domain K01322 - 3.4.21.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005665 465.0
BYD3_k127_4623897_1 Pfam Amidohydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000122 371.0
BYD3_k127_4623897_2 Pyridoxal-phosphate dependent enzyme K01754 - 4.3.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002623 289.0
BYD3_k127_4623897_3 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000001254 224.0
BYD3_k127_4623897_4 helix_turn_helix, arabinose operon control protein - - - 0.00000000000000000000121 106.0
BYD3_k127_4623897_5 Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms K07027 - - 0.0000000000001013 83.0
BYD3_k127_4660537_0 LytTr DNA-binding domain K02477 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002625 285.0
BYD3_k127_4660537_1 amidohydrolase K07045 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002062 283.0
BYD3_k127_4660537_2 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000001234 248.0
BYD3_k127_4660537_3 Histidine kinase K08082 - 2.7.13.3 0.00000000000000000000000000000000000000000000002157 198.0
BYD3_k127_4708154_0 Urocanase C-terminal domain K01712 - 4.2.1.49 2.219e-260 813.0
BYD3_k127_4708154_1 NADH dehydrogenase K00335,K18331 - 1.12.1.3,1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009943 402.0
BYD3_k127_4708154_2 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002218 304.0
BYD3_k127_4708154_3 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000000000000000000000000000114 128.0
BYD3_k127_4734046_0 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009818 415.0
BYD3_k127_4734046_1 prohibitin homologues - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000158 349.0
BYD3_k127_4734046_10 CutA1 divalent ion tolerance protein K03926 - - 0.0000000000000000000000002311 110.0
BYD3_k127_4734046_11 - - - - 0.00000003286 61.0
BYD3_k127_4734046_2 Dienelactone hydrolase family K01061 - 3.1.1.45 0.00000000000000000000000000000000000000000000000000000000000000000004647 245.0
BYD3_k127_4734046_3 Cellulose biosynthesis protein BcsQ K03496 - - 0.000000000000000000000000000000000000000000000000000000000000006128 228.0
BYD3_k127_4734046_4 S-adenosyl-l-methionine hydroxide adenosyltransferase K22205 - - 0.0000000000000000000000000000000000000000000000000000116 199.0
BYD3_k127_4734046_5 Peroxiredoxin K03564 - 1.11.1.15 0.000000000000000000000000000000000000000000000000506 183.0
BYD3_k127_4734046_6 Rhomboid family - - - 0.000000000000000000000000000000000000000000000002981 191.0
BYD3_k127_4734046_7 haloacid dehalogenase-like hydrolase - - - 0.0000000000000000000000000000000000000000007089 172.0
BYD3_k127_4734046_8 NUDIX domain K01515 - 3.6.1.13 0.0000000000000000000000000000000002856 148.0
BYD3_k127_4734046_9 Belongs to the HesB IscA family K13628 - - 0.00000000000000000000000000000002863 133.0
BYD3_k127_4777540_0 Glycosyl hydrolases family 2, TIM barrel domain K01190 - 3.2.1.23 1.148e-275 884.0
BYD3_k127_4777540_1 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005644 602.0
BYD3_k127_4777540_10 Acts as a magnesium transporter K06213 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001237 311.0
BYD3_k127_4777540_11 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770,K12506 - 2.7.7.60,4.6.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001019 318.0
BYD3_k127_4777540_12 Belongs to the LarC family K09121 - 4.99.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000284 280.0
BYD3_k127_4777540_13 (AIR) carboxylase K06898 - - 0.0000000000000000000000000000000000000000000000000000000000000000000005595 257.0
BYD3_k127_4777540_14 Nucleotidyl transferase K00963 - 2.7.7.9 0.00000000000000000000000000000000000000000000000000000000000000000005512 260.0
BYD3_k127_4777540_15 PFAM CBS domain containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000001219 248.0
BYD3_k127_4777540_16 Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation K09773 - 2.7.11.33,2.7.4.28 0.0000000000000000000000000000000000000000000000000000000000000007686 251.0
BYD3_k127_4777540_17 Domain of unknown function (DUF1732) - - - 0.0000000000000000000000000000000000000000000000000000000000231 216.0
BYD3_k127_4777540_18 Phage SPO1 DNA polymerase-related protein K21929 - 3.2.2.27 0.000000000000000000000000000000000000000000000000000004513 202.0
BYD3_k127_4777540_19 NAD-dependent glycerol-3-phosphate dehydrogenase domain protein K00057 GO:0003674,GO:0003824,GO:0004367,GO:0006072,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016491,GO:0016614,GO:0016616,GO:0019637,GO:0044237,GO:0046167,GO:0052646,GO:0055114,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901576 1.1.1.94 0.00000000000000000000000000000000000000000000000003867 196.0
BYD3_k127_4777540_2 Participates in initiation and elongation during chromosome replication K02314 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001883 467.0
BYD3_k127_4777540_20 Essential for recycling GMP and indirectly, cGMP K00942 - 2.7.4.8 0.00000000000000000000000000000000000000000000827 188.0
BYD3_k127_4777540_21 Domain of unknown function DUF21 K03699 - - 0.00000000000000000000000000000000000000000004957 178.0
BYD3_k127_4777540_22 permease K03548 - - 0.000000000000000000000000000000000000000001035 173.0
BYD3_k127_4777540_23 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K02806 - - 0.0000000000000000000000000000000000000002907 160.0
BYD3_k127_4777540_24 Large family of predicted nucleotide-binding domains - - - 0.0000000000000000000000000000000004675 152.0
BYD3_k127_4777540_25 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.000000000000000000000000000005607 136.0
BYD3_k127_4777540_26 diguanylate cyclase - - - 0.0000000000000000000000000000138 132.0
BYD3_k127_4777540_27 cellulose binding K00505 - 1.14.18.1 0.000000000000000000003111 104.0
BYD3_k127_4777540_28 Protein of unknown function (DUF1232) - - - 0.0000000000000000003429 92.0
BYD3_k127_4777540_29 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) - - - 0.00000000000000003777 92.0
BYD3_k127_4777540_3 7TM receptor with intracellular HD hydrolase K07037 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006067 439.0
BYD3_k127_4777540_30 Involved in DNA repair and RecF pathway recombination K03584 - - 0.000000000000005993 87.0
BYD3_k127_4777540_31 - - - - 0.00000000000001279 87.0
BYD3_k127_4777540_32 - - - - 0.000000001401 63.0
BYD3_k127_4777540_33 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.00000001309 63.0
BYD3_k127_4777540_34 repeat-containing protein - - - 0.00000009435 64.0
BYD3_k127_4777540_35 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits - - - 0.0000001506 64.0
BYD3_k127_4777540_36 C4-type zinc ribbon domain K07164 - - 0.0002307 51.0
BYD3_k127_4777540_4 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001829 430.0
BYD3_k127_4777540_5 Belongs to the GHMP kinase family. GalK subfamily K00849 - 2.7.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003396 411.0
BYD3_k127_4777540_6 Elongation factor SelB, winged helix K03833 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001181 393.0
BYD3_k127_4777540_7 PhoH-like protein K06217 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001738 353.0
BYD3_k127_4777540_8 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008042 337.0
BYD3_k127_4777540_9 Protein of unknown function (DUF512) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006957 327.0
BYD3_k127_4800026_0 PFAM carboxyl transferase K01969,K15052 - 2.1.3.15,6.4.1.3,6.4.1.4 1.429e-231 729.0
BYD3_k127_4800026_1 Pyridoxal-dependent decarboxylase conserved domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001545 509.0
BYD3_k127_4800026_2 Acetyl propionyl-CoA carboxylase, alpha subunit K11263 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 6.3.4.14,6.4.1.2,6.4.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000003007 273.0
BYD3_k127_4800026_3 Enoyl-CoA hydratase/isomerase K13766,K13779 - 4.2.1.18,4.2.1.57 0.00000000000000000000000000000000000000000000000000000000000000001843 250.0
BYD3_k127_4800026_4 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.00000000000000000000000000000000000000001423 177.0
BYD3_k127_4880051_0 PFAM UvrD REP helicase K03657 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001221 540.0
BYD3_k127_4880051_1 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009385 523.0
BYD3_k127_4880051_2 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001978 464.0
BYD3_k127_4880051_3 Histidine kinase K07709,K13924 - 2.1.1.80,2.7.13.3,3.1.1.61 0.00000000000000000000000000000000000000000000000000000000000000001623 245.0
BYD3_k127_4880051_4 PFAM Nucleotidyl transferase K00971,K16011 - 2.7.7.13,5.3.1.8 0.00000000000000000000000000000000000000000000000000000000000000004517 241.0
BYD3_k127_4880051_5 Polysaccharide biosynthesis protein K15856 - 1.1.1.281 0.0000000000000000000000000000000000000000000000000000002468 209.0
BYD3_k127_4880051_6 Sugar nucleotidyl transferase - - - 0.00000000000000000000000000000000000000000000000000005817 210.0
BYD3_k127_4880051_7 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.000000000009641 70.0
BYD3_k127_4880051_8 Sporulation related domain - - - 0.0008979 52.0
BYD3_k127_4947647_0 Cytochrome c-type biogenesis protein CcmF C-terminal K02198 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001622 574.0
BYD3_k127_4947647_1 of the drug metabolite transporter (DMT) superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004937 260.0
BYD3_k127_4947647_10 3-deoxy-D-manno-octulosonic-acid transferase K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.00000000000000289 85.0
BYD3_k127_4947647_11 PFAM glycosyl transferase family 9 K02843 - - 0.00000000000001106 76.0
BYD3_k127_4947647_12 zinc-ribbon domain - - - 0.0006183 48.0
BYD3_k127_4947647_2 Cytochrome C assembly protein K02195 - - 0.00000000000000000000000000000000000000000000000000002126 196.0
BYD3_k127_4947647_3 - - - - 0.00000000000000000000000000000000000000000000427 180.0
BYD3_k127_4947647_4 ABC transporter K02193 - 3.6.3.41 0.00000000000000000000000000000000000005555 156.0
BYD3_k127_4947647_5 CcmB protein K02194 - - 0.000000000000000000000000000000000009056 151.0
BYD3_k127_4947647_6 Redoxin K02199 - - 0.0000000000000000000000000000001198 132.0
BYD3_k127_4947647_7 Nitrogen fixation protein NifU - - - 0.0000000000000000001704 95.0
BYD3_k127_4947647_8 subunit of a heme lyase - - - 0.0000000000000000003896 99.0
BYD3_k127_4947647_9 Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH K02197 - - 0.00000000000000004115 93.0
BYD3_k127_4981441_0 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001322 524.0
BYD3_k127_4981441_1 PFAM PfkB domain protein K00856 - 2.7.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003249 333.0
BYD3_k127_4981441_10 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.000000346 63.0
BYD3_k127_4981441_2 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004925 324.0
BYD3_k127_4981441_3 Glycosyltransferase like family 2 K00721 - 2.4.1.83 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002168 283.0
BYD3_k127_4981441_4 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.000000000000000000000000000000000000000000000000000000000000002215 235.0
BYD3_k127_4981441_5 Arginyl-tRNA synthetase K01887 GO:0003674,GO:0003824,GO:0004812,GO:0004814,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006420,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.19 0.00000000000000000000000000000000000000000000001309 179.0
BYD3_k127_4981441_6 Calcineurin-like phosphoesterase superfamily domain - - - 0.000000000000000000000000000000000000004802 163.0
BYD3_k127_4981441_7 TIGRFAM riboflavin synthase, alpha subunit K00793 - 2.5.1.9 0.000000000000000000000000000000000001841 158.0
BYD3_k127_4981441_8 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 - 2.5.1.78 0.0000000000000000000000000000000003531 138.0
BYD3_k127_4981441_9 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.0000000000000000005004 102.0
BYD3_k127_5067051_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 3.6.3.14 7.552e-229 719.0
BYD3_k127_5067051_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 2.491e-228 734.0
BYD3_k127_5067051_10 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.000000000000000000000000829 117.0
BYD3_k127_5067051_11 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02109 - - 0.00000000000000000000001471 108.0
BYD3_k127_5067051_12 ABC-2 type transporter K01992 - - 0.000000000000000000003501 109.0
BYD3_k127_5067051_13 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016469,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0032991,GO:0033178,GO:0034220,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0045259,GO:0045261,GO:0046034,GO:0046390,GO:0046483,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.000000000000000002551 89.0
BYD3_k127_5067051_14 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 - - 0.000000000000000003556 88.0
BYD3_k127_5067051_15 Polymer-forming cytoskeletal - - - 0.000000000000005651 88.0
BYD3_k127_5067051_16 - - - - 0.000000000001976 78.0
BYD3_k127_5067051_17 Dehydrogenase - - - 0.000000000004278 76.0
BYD3_k127_5067051_18 ABC-2 family transporter protein K01992 - - 0.000000003233 70.0
BYD3_k127_5067051_19 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 - 4.2.1.59 0.00000002471 66.0
BYD3_k127_5067051_2 PFAM CobQ CobB MinD ParA nucleotide binding domain K03496 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001807 315.0
BYD3_k127_5067051_20 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter - - - 0.00002767 51.0
BYD3_k127_5067051_21 Helix-turn-helix domain - - - 0.00008766 55.0
BYD3_k127_5067051_3 PFAM ABC transporter related K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001012 302.0
BYD3_k127_5067051_4 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001721 261.0
BYD3_k127_5067051_5 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.00000000000000000000000000000000000000000000000000000000000000001161 242.0
BYD3_k127_5067051_6 2Fe-2S -binding domain protein K03518 - 1.2.5.3 0.00000000000000000000000000000000000000000000000000000000000000005637 229.0
BYD3_k127_5067051_7 Belongs to the ParB family K03497 - - 0.00000000000000000000000000000000000000000000000000000000000001605 232.0
BYD3_k127_5067051_8 Glutathione S-transferase, C-terminal domain - - - 0.00000000000000000000000000000000000000002284 161.0
BYD3_k127_5067051_9 PFAM peptidase - - - 0.0000000000000000000000000003411 127.0
BYD3_k127_5130925_0 Beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006608 585.0
BYD3_k127_5130925_1 Mycolic acid cyclopropane synthetase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003436 260.0
BYD3_k127_5130925_10 structural constituent of cuticle - - - 0.0008692 46.0
BYD3_k127_5130925_2 TIGRFAM cytochrome C family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000007523 265.0
BYD3_k127_5130925_3 Predicted periplasmic lipoprotein (DUF2279) - - - 0.00000000000000000000000000000000000000296 159.0
BYD3_k127_5130925_5 protein heterodimerization activity - - - 0.0000000000000002073 80.0
BYD3_k127_5130925_6 TIGRFAM cytochrome C family protein - - - 0.000000000002365 68.0
BYD3_k127_5130925_7 Protein of unknown function (DUF1207) - - - 0.0000007482 53.0
BYD3_k127_5130925_8 glyoxalase III activity - - - 0.00001494 50.0
BYD3_k127_5130925_9 - - - - 0.0004135 46.0
BYD3_k127_5321273_0 Peptidase family M3 K01392 - 3.4.24.15 1.545e-219 699.0
BYD3_k127_5321273_1 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 2.171e-205 692.0
BYD3_k127_5321273_10 phosphatidate phosphatase activity K01096,K19302 - 3.1.3.27,3.1.3.4,3.1.3.81,3.6.1.27 0.00000000000000000000000005912 117.0
BYD3_k127_5321273_11 Flavin reductase like domain - - - 0.0000000000000000000001011 115.0
BYD3_k127_5321273_12 translation release factor activity K03265 - - 0.0000000000000000000353 103.0
BYD3_k127_5321273_13 PFAM NHL repeat containing protein - - - 0.000000000000000001365 100.0
BYD3_k127_5321273_14 Protein of unknown function (DUF1003) - - - 0.000000000000003836 86.0
BYD3_k127_5321273_2 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 - 5.4.2.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005416 508.0
BYD3_k127_5321273_3 Psort location CytoplasmicMembrane, score - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003808 386.0
BYD3_k127_5321273_4 O-methyltransferase - - - 0.00000000000000000000000000000000000000000000001176 180.0
BYD3_k127_5321273_5 EVE domain - - - 0.00000000000000000000000000000000000416 158.0
BYD3_k127_5321273_6 transferase activity, transferring glycosyl groups - - - 0.00000000000000000000000000000000001098 159.0
BYD3_k127_5321273_7 Transglycosylase SLT domain K08309 - - 0.00000000000000000000000000003091 136.0
BYD3_k127_5321273_8 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 GO:0000166,GO:0001882,GO:0001884,GO:0002135,GO:0003674,GO:0003824,GO:0004140,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017076,GO:0018130,GO:0019103,GO:0019438,GO:0019637,GO:0019693,GO:0030554,GO:0032549,GO:0032551,GO:0032552,GO:0032553,GO:0032554,GO:0032557,GO:0032558,GO:0032564,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0036094,GO:0040007,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.7.1.24 0.0000000000000000000000000009218 121.0
BYD3_k127_5321273_9 Cold shock K03704 - - 0.000000000000000000000000002382 111.0
BYD3_k127_5329702_0 Citrate synthase, C-terminal domain K01647 - 2.3.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000123 433.0
BYD3_k127_5329702_1 Belongs to the pyruvate kinase family K00873 GO:0003674,GO:0003824,GO:0004743,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016020,GO:0016052,GO:0016053,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0040007,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0071944,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576 2.7.1.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006736 444.0
BYD3_k127_5329702_2 Belongs to the peptidase M48B family K03799 - - 0.00000000000000000000000000000000000000000000000000000000000228 225.0
BYD3_k127_5329702_3 LemA family K03744 - - 0.00000000000000000000000000000000000000000000000000000000173 206.0
BYD3_k127_5329702_4 Phosphoenolpyruvate phosphomutase K01637 - 4.1.3.1 0.0000000000000000000000000000000000001331 159.0
BYD3_k127_5329702_5 Lysin motif - - - 0.000000000000000002757 89.0
BYD3_k127_5329702_6 - - - - 0.000000000000001856 82.0
BYD3_k127_5363159_0 DNA topoisomerase type I activity K03168 - 5.99.1.2 6.561e-210 679.0
BYD3_k127_5363159_1 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 - 3.4.25.2 0.000000000000000000000000000000000000000000000000000000000000000000000001361 249.0
BYD3_k127_5363159_2 Belongs to the 'phage' integrase family. XerC subfamily K03733,K04763 - - 0.0000000000000000000000000000000000000000000000000000000000002227 224.0
BYD3_k127_5454341_0 efflux transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006686 544.0
BYD3_k127_5454341_1 efflux transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007779 527.0
BYD3_k127_5454341_2 COG0577 ABC-type antimicrobial peptide transport system permease component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005012 549.0
BYD3_k127_5454341_3 efflux transmembrane transporter activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002334 462.0
BYD3_k127_5454341_4 efflux transmembrane transporter activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001228 389.0
BYD3_k127_5454341_5 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004685 356.0
BYD3_k127_5610161_0 Domain of unknown function (DUF4157) - - - 2.537e-240 787.0
BYD3_k127_5610161_1 ATPase family associated with various cellular activities (AAA) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001563 528.0
BYD3_k127_5610161_10 Baseplate J-like protein - - - 0.00000002263 57.0
BYD3_k127_5610161_2 3-demethylubiquinone-9 3-methyltransferase K00568 - 2.1.1.222,2.1.1.64 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004041 313.0
BYD3_k127_5610161_4 oxidoreductase activity - - - 0.0000000000000000000000000000000000000109 168.0
BYD3_k127_5610161_6 Tetratricopeptide TPR_2 repeat protein - - - 0.0000000000000000000000000000003529 134.0
BYD3_k127_5610161_7 Tail protein - - - 0.00000000000000000000000000001823 128.0
BYD3_k127_5610161_8 - - - - 0.00000000001209 76.0
BYD3_k127_5610161_9 phage tail tape measure protein - - - 0.0000000007621 70.0
BYD3_k127_5680655_0 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573,K12585 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002538 604.0
BYD3_k127_5680655_1 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.00000000000000000000000000000000000000000000000000000000000000001462 235.0
BYD3_k127_5680655_2 PBP superfamily domain K05772 - - 0.000000000000000000000000000000000000000000000000001571 197.0
BYD3_k127_5680655_3 PFAM binding-protein-dependent transport systems inner membrane component K05773 - - 0.00000000000000000000000000000000000000000002055 170.0
BYD3_k127_5680655_4 Part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system K09817 - - 0.000000000000000003117 98.0
BYD3_k127_5680655_5 Trm112p-like protein K09791 - - 0.00000000000001535 85.0
BYD3_k127_5680655_6 calcium proton exchanger K07300 - - 0.00000000004698 65.0
BYD3_k127_5680655_7 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07658 - - 0.0002447 49.0
BYD3_k127_5718442_0 Pfam Adenylate and Guanylate cyclase catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001523 554.0
BYD3_k127_5718442_1 Pyridoxal-phosphate dependent enzyme K01738 - 2.5.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000268 494.0
BYD3_k127_5718442_2 Multicopper oxidase K00368 - 1.7.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001314 436.0
BYD3_k127_5718442_3 Aldo/keto reductase family K00002 - 1.1.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009576 313.0
BYD3_k127_5718442_4 Na( ) H( ) antiporter that extrudes sodium in exchange for external protons K03313 - - 0.000000000000000000000000000000000000000000000000000000000000000000002113 246.0
BYD3_k127_5718442_5 Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide - - - 0.00000000000000000000000000000000000000000000000000000000000000000006754 238.0
BYD3_k127_5718442_6 Cytochrome b/b6/petB - - - 0.0000000000000000000000000000000000000000000001712 187.0
BYD3_k127_5947490_0 Peptidase dimerisation domain K01436,K01438,K01439 - 3.5.1.16,3.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003869 499.0
BYD3_k127_5947490_1 Protoporphyrinogen oxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004719 533.0
BYD3_k127_5947490_10 Methyltransferase small domain - - - 0.0000000000000000000000000000003161 134.0
BYD3_k127_5947490_11 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000001943 131.0
BYD3_k127_5947490_12 Belongs to the Fur family K09825 GO:0003674,GO:0003700,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0140110,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2000374,GO:2001141 - 0.00000000000000000000000000001916 122.0
BYD3_k127_5947490_13 Protein of unknown function (DUF541) K09807 GO:0005575,GO:0005623,GO:0042597,GO:0044464 - 0.0000000000000000000000000003577 128.0
BYD3_k127_5947490_14 Putative MetA-pathway of phenol degradation - - - 0.0000000000000000000000007721 115.0
BYD3_k127_5947490_15 peptidase - - - 0.00000000000001761 88.0
BYD3_k127_5947490_16 - - - - 0.00000000001134 77.0
BYD3_k127_5947490_17 Membrane - - - 0.000000001101 65.0
BYD3_k127_5947490_18 Cytochrome c-type biogenesis protein K02200 - - 0.000004268 58.0
BYD3_k127_5947490_2 Chromate transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008432 422.0
BYD3_k127_5947490_3 transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009697 406.0
BYD3_k127_5947490_4 PFAM multicopper oxidase type - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006233 403.0
BYD3_k127_5947490_5 FeoA K03709 - - 0.000000000000000000000000000000000000000000000000000000003733 206.0
BYD3_k127_5947490_6 PFAM cobalamin adenosyltransferase K00798 - 2.5.1.17 0.0000000000000000000000000000000000000000000000003708 196.0
BYD3_k127_5947490_7 Glycosyl transferase family 21 - - - 0.000000000000000000000000000000000000000000003554 186.0
BYD3_k127_5947490_8 Glycine cleavage T-protein C-terminal barrel domain K00605,K06980 - 2.1.2.10 0.000000000000000000000000000000000000009216 160.0
BYD3_k127_5947490_9 SNARE associated Golgi protein K19302 - 3.6.1.27 0.0000000000000000000000000000000004757 141.0
BYD3_k127_6188697_0 PFAM Ppx GppA phosphatase K01524 - 3.6.1.11,3.6.1.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009742 350.0
BYD3_k127_6188697_1 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 - 2.7.4.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002847 284.0
BYD3_k127_6188697_2 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 - 2.7.4.9 0.000000000000000000000000000000000000000000000000000000000000000008528 243.0
BYD3_k127_6188697_3 PFAM Alcohol dehydrogenase zinc-binding domain protein K00344 - 1.6.5.5 0.0000000000000000000000000000000000000000000000000000000000000001336 228.0
BYD3_k127_6188697_4 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.000000000000000000000000000000000000000000000000003633 207.0
BYD3_k127_6188697_5 AAA domain, putative AbiEii toxin, Type IV TA system K02065 - - 0.0000000000000000000000000000000000000000000000002035 196.0
BYD3_k127_6188697_6 Belongs to the MlaE permease family K02066 - - 0.000000000000000000000000000000000000000000000003196 190.0
BYD3_k127_6188697_7 Bacterial transcriptional activator domain K12132 - 2.7.11.1 0.000000000000000000000000000000008663 148.0
BYD3_k127_6188697_8 MlaD protein K02067 - - 0.0000000000000000000000000006321 130.0
BYD3_k127_6188697_9 CHAD - - - 0.0003471 53.0
BYD3_k127_6197368_0 Amidohydrolase family K06015 - 3.5.1.81 2.51e-242 762.0
BYD3_k127_6197368_1 Peptidase family S58 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009402 467.0
BYD3_k127_6197368_2 Glycosyltransferase like family 2 - - - 0.000000000000000000000000000000000000000000000000000000000002576 223.0
BYD3_k127_6197368_3 FAD binding domain - - - 0.0000000000000000000000000000000000000000000000000004187 198.0
BYD3_k127_6197368_4 Glutathione-dependent formaldehyde-activating enzyme - - - 0.00000000000000000000000000000000000000000001328 167.0
BYD3_k127_6197368_5 protein with SCP PR1 domains - - - 0.00000000000000000000000000002833 126.0
BYD3_k127_6197368_6 - - - - 0.0000000000000000000000000008279 128.0
BYD3_k127_6197368_7 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.0000000001271 64.0
BYD3_k127_6231369_0 leucyl-tRNA aminoacylation K01869 - 6.1.1.4 2.177e-244 777.0
BYD3_k127_6231369_1 Glycosyltransferase like family 2 K00721 - 2.4.1.83 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001987 329.0
BYD3_k127_6231369_2 glycosyl transferase group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002084 269.0
BYD3_k127_6231369_3 Bacterial membrane protein YfhO - - - 0.000000000000000000000000000000000000000000000000000000000000000000000992 269.0
BYD3_k127_6231369_4 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.000000000000000000000000000000000000000000000002509 194.0
BYD3_k127_6231369_5 methyltransferase - - - 0.000000000001077 81.0
BYD3_k127_6231369_6 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.000000001478 72.0
BYD3_k127_6231369_7 - - - - 0.000002858 59.0
BYD3_k127_6316379_0 Adenylyl cyclase class-3 4 guanylyl cyclase K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002634 327.0
BYD3_k127_6316379_1 Belongs to the 5'-nucleotidase family K01081,K11751 - 3.1.3.5,3.6.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003681 305.0
BYD3_k127_6316379_2 Mechanosensitive ion channel - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000009802 269.0
BYD3_k127_6316379_3 Domain of unknown function (DUF4870) - - - 0.000000000000000443 83.0
BYD3_k127_6316379_4 Branched-chain amino acid transport system / permease component K02057,K10544 - - 0.00000004563 66.0
BYD3_k127_6316379_5 Von Willebrand factor A - - - 0.00001359 57.0
BYD3_k127_6347629_0 Cation transporter/ATPase, N-terminus K01537 - 3.6.3.8 0.0 1069.0
BYD3_k127_6347629_1 TrkA-C domain K03455 - - 7.972e-206 666.0
BYD3_k127_6347629_10 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03316 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002747 295.0
BYD3_k127_6347629_11 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007269 288.0
BYD3_k127_6347629_12 Protein of unknown function (DUF1538) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001349 251.0
BYD3_k127_6347629_13 Nucleotidyl transferase of unknown function (DUF2204) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003056 252.0
BYD3_k127_6347629_14 3-beta hydroxysteroid dehydrogenase K00329,K00356 - 1.6.5.3,1.6.99.3 0.0000000000000000000000000000000000000000000000000000000000000000006571 239.0
BYD3_k127_6347629_15 phosphatase homologous to the C-terminal domain of histone macroH2A1 - - - 0.0000000000000000000000000000000000000000000000000000000008908 224.0
BYD3_k127_6347629_16 PFAM PEBP family protein K06910 - - 0.000000000000000000000000000000000000000000000000000000001081 228.0
BYD3_k127_6347629_17 ABC transporter K01990 - - 0.00000000000000000000000000000000000000000000000000000009505 209.0
BYD3_k127_6347629_18 CoA binding domain K06929 - - 0.00000000000000000000000000000000000000000000000686 186.0
BYD3_k127_6347629_19 short-chain dehydrogenase reductase SDR - - - 0.00000000000000000000000000000000000000000003343 175.0
BYD3_k127_6347629_2 Alcohol dehydrogenase GroES-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003893 619.0
BYD3_k127_6347629_20 Universal stress protein family - - - 0.000000000000000000000000000000000000000001848 168.0
BYD3_k127_6347629_21 Serine aminopeptidase, S33 K06889 GO:0005575,GO:0005618,GO:0005623,GO:0008150,GO:0009605,GO:0009607,GO:0030312,GO:0035821,GO:0043207,GO:0044003,GO:0044403,GO:0044419,GO:0044464,GO:0050896,GO:0051701,GO:0051704,GO:0051707,GO:0051817,GO:0052031,GO:0052173,GO:0052200,GO:0052255,GO:0052552,GO:0052553,GO:0052561,GO:0052562,GO:0052564,GO:0052572,GO:0071944,GO:0075136 - 0.000000000000000000000000000000000000002112 159.0
BYD3_k127_6347629_22 Nitrogen regulatory protein P-II - - - 0.00000000000000000000000000000000000403 139.0
BYD3_k127_6347629_23 D-aminopeptidase K16203 - - 0.000000000000000000000000000000000009023 156.0
BYD3_k127_6347629_24 D-aminopeptidase K16203 - - 0.0000000000000000000000000000000008579 150.0
BYD3_k127_6347629_25 PFAM peptidase M55 D-aminopeptidase K16203 - - 0.000000000000000000000000000000006311 146.0
BYD3_k127_6347629_26 Putative lumazine-binding - - - 0.00000000000000000000000000002914 127.0
BYD3_k127_6347629_27 Cold shock protein domain K03704 - - 0.000000000000000000000000003407 125.0
BYD3_k127_6347629_28 Cupin 2, conserved barrel domain protein - - - 0.0000000000000000000000008769 114.0
BYD3_k127_6347629_29 daunorubicin resistance ABC transporter membrane protein K01992 - - 0.0000000003803 73.0
BYD3_k127_6347629_3 peptidase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002519 571.0
BYD3_k127_6347629_30 Rhodanese Homology Domain - - - 0.00000000116 70.0
BYD3_k127_6347629_31 TIGRFAM 40-residue YVTN family beta-propeller repeat - - - 0.000000001533 72.0
BYD3_k127_6347629_32 Thioredoxin-like [2Fe-2S] ferredoxin - - - 0.00000001348 67.0
BYD3_k127_6347629_33 Peptidase family M28 - - - 0.0000001466 53.0
BYD3_k127_6347629_4 Aldehyde dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005352 483.0
BYD3_k127_6347629_5 PFAM Fructose-bisphosphate aldolase, class-I K01623 - 4.1.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002923 438.0
BYD3_k127_6347629_6 Domain of unknown function (DU1801) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008029 391.0
BYD3_k127_6347629_7 peptidase M24 K01271 - 3.4.13.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001866 379.0
BYD3_k127_6347629_8 Polyketide cyclase / dehydrase and lipid transport - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002001 339.0
BYD3_k127_6347629_9 Protein of unknown function (DUF1538) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001584 286.0
BYD3_k127_6365021_0 Undecaprenyl-phosphate galactose phosphotransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004283 346.0
BYD3_k127_6365021_1 PFAM glycosyl transferase group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001464 266.0
BYD3_k127_6365021_2 PFAM lipopolysaccharide biosynthesis protein - - - 0.00000000000000000000000000000000000000005279 175.0
BYD3_k127_6365021_3 Membrane protein involved in the export of O-antigen and teichoic acid - - - 0.0000000000000000000000000000000000000001139 170.0
BYD3_k127_6365021_4 polysaccharide export K01991 - - 0.00000000000000000000000000000000002588 145.0
BYD3_k127_6365021_5 glycosyl transferase family - - - 0.00000000000000000000002279 116.0
BYD3_k127_6365021_6 40-residue YVTN family beta-propeller repeat - - - 0.00000000007234 74.0
BYD3_k127_6365021_7 Glycosyltransferase Family 4 - - - 0.00000007699 56.0
BYD3_k127_644739_0 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002877 606.0
BYD3_k127_644739_1 PQQ enzyme repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000137 611.0
BYD3_k127_644739_2 metalloendopeptidase activity K08602 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005757 325.0
BYD3_k127_644739_3 TrkA-N domain K10716 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001199 263.0
BYD3_k127_644739_4 Phosphoglycerate mutase family - - - 0.000000000000000000000000000002652 138.0
BYD3_k127_6450345_0 lysine biosynthetic process via aminoadipic acid - - - 7.404e-221 732.0
BYD3_k127_6450345_1 tRNA-splicing ligase RtcB K14415 - 6.5.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002006 567.0
BYD3_k127_6450345_10 PFAM Peptidase family M23 K21472 - - 0.00000000000000000000000000000000000000000000009009 191.0
BYD3_k127_6450345_11 Probable molybdopterin binding domain - - - 0.0000000000000000000000000000000000000000001201 181.0
BYD3_k127_6450345_12 Glyoxalase-like domain - - - 0.0000000000000000000000000000000000000000003009 169.0
BYD3_k127_6450345_13 cytochrome - - - 0.00000000000000000000000000000000000000001046 171.0
BYD3_k127_6450345_14 PFAM small multidrug resistance protein K11741 - - 0.000000000000000000000000000000000000002049 152.0
BYD3_k127_6450345_15 WD40-like Beta Propeller Repeat K03641 - - 0.000000000000000000000000000000000000002135 166.0
BYD3_k127_6450345_17 Penicillinase repressor - - - 0.000000000000000000000000009358 129.0
BYD3_k127_6450345_18 Archease protein family (MTH1598/TM1083) - - - 0.00000000000000004198 87.0
BYD3_k127_6450345_19 pfam nudix K03574 - 3.6.1.55 0.00000000000000229 89.0
BYD3_k127_6450345_2 Metallo-beta-lactamase superfamily K01069 - 3.1.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001173 530.0
BYD3_k127_6450345_21 OmpA family - - - 0.00000003711 64.0
BYD3_k127_6450345_3 CHAT domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003578 458.0
BYD3_k127_6450345_4 Ferredoxin--NADP reductase K21567 - 1.18.1.2,1.19.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007354 364.0
BYD3_k127_6450345_5 Cation efflux family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005008 288.0
BYD3_k127_6450345_6 carboxylic ester hydrolase activity K00433 - 1.11.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002725 285.0
BYD3_k127_6450345_7 Peptidase family M28 - - - 0.00000000000000000000000000000000000000000000000000000000000000001366 245.0
BYD3_k127_6450345_8 Signal peptidase, peptidase S26 K03100 - 3.4.21.89 0.0000000000000000000000000000000000000000000000000000000000001584 233.0
BYD3_k127_6450345_9 Protein of unknown function (DUF421) - - - 0.0000000000000000000000000000000000000000000000008624 181.0
BYD3_k127_6497793_0 Glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001104 308.0
BYD3_k127_6497793_1 helix_turn_helix, mercury resistance - - - 0.000000000000000000000000000000002811 136.0
BYD3_k127_6497793_2 - - - - 0.00000000000000000008318 94.0
BYD3_k127_6497793_3 Protein of unknown function (DUF1097) - - - 0.00000000000005434 82.0
BYD3_k127_6497793_4 Glycosyl hydrolase family 65, N-terminal domain - - - 0.000000000005615 78.0
BYD3_k127_651209_0 Transport of potassium into the cell K03549 GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0008150,GO:0008324,GO:0009987,GO:0015075,GO:0015077,GO:0015079,GO:0015318,GO:0015672,GO:0016020,GO:0022857,GO:0022890,GO:0030001,GO:0034220,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0071804,GO:0071805,GO:0098655,GO:0098660,GO:0098662 - 2.444e-221 704.0
BYD3_k127_651209_1 SNARE associated Golgi protein - - - 0.000003484 53.0
BYD3_k127_651209_2 Dienelactone hydrolase family - - - 0.0002154 52.0
BYD3_k127_651209_3 TIGRFAM RHS repeat-associated core domain - - - 0.0002714 54.0
BYD3_k127_6533003_0 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00639,K00652 GO:0005575,GO:0005618,GO:0005623,GO:0030312,GO:0044464,GO:0071944 2.3.1.29,2.3.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008456 507.0
BYD3_k127_6533003_1 ATP-dependent DNA helicase activity K03655 GO:0003674,GO:0003678,GO:0003724,GO:0003824,GO:0004003,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006725,GO:0006807,GO:0006996,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0008186,GO:0009314,GO:0009379,GO:0009628,GO:0009987,GO:0010501,GO:0016020,GO:0016043,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032392,GO:0032508,GO:0032991,GO:0033202,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048476,GO:0050896,GO:0051276,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0140097,GO:0140098,GO:1901360,GO:1902494 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003262 528.0
BYD3_k127_6533003_2 acetyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001614 366.0
BYD3_k127_6533003_3 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) K03110 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000009553 295.0
BYD3_k127_6533003_4 Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004582 286.0
BYD3_k127_6533003_5 Sugar (and other) transporter K08151 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000194 266.0
BYD3_k127_6533003_6 Tetratricopeptide repeat K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000007168 275.0
BYD3_k127_6533003_7 ECF sigma factor - - - 0.000000000000000000000000000000000002232 160.0
BYD3_k127_6533003_8 Copper binding proteins, plastocyanin/azurin family - - - 0.000000005224 65.0
BYD3_k127_6554944_0 WD40-like Beta Propeller Repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005207 419.0
BYD3_k127_6554944_1 PFAM NAD-dependent epimerase dehydratase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001956 312.0
BYD3_k127_6554944_2 Fumarylacetoacetate (FAA) hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003745 278.0
BYD3_k127_6554944_3 Peptidase family M28 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000558 254.0
BYD3_k127_6554944_4 DoxX K15977 - - 0.00000000000000000000000000000006946 139.0
BYD3_k127_6554944_5 Transcriptional regulatory protein, C terminal - - - 0.00000000000000000000000000575 111.0
BYD3_k127_6554944_6 Beta-lactamase superfamily domain - - - 0.00000003938 64.0
BYD3_k127_6584139_0 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 6.484e-271 864.0
BYD3_k127_6584139_1 acyl-CoA dehydrogenase activity K00252 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464 1.3.8.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002784 546.0
BYD3_k127_6584139_10 synthase homocitrate synthase family K01649 - 2.3.3.13 0.00000000000000000000000000000000000000000000000000000000000000000007413 234.0
BYD3_k127_6584139_11 Predicted metal-binding integral membrane protein (DUF2182) - - - 0.000000000000000000000000000000000000000000000000000000000000003579 231.0
BYD3_k127_6584139_12 Protein of unknown function (DUF1326) - - - 0.000000000000000000000000000000000000000000000000000003362 206.0
BYD3_k127_6584139_13 - - - - 0.0000000000000000000000000000000000000000000000001585 198.0
BYD3_k127_6584139_14 PFAM Adenylate and Guanylate cyclase catalytic domain - - - 0.00000000000000000000000000000000000000000000009607 194.0
BYD3_k127_6584139_15 Domain of unknown function (DUF1835) - - - 0.000000000000000000000000000000000000000000003129 177.0
BYD3_k127_6584139_16 protein kinase activity K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000004473 185.0
BYD3_k127_6584139_17 homoserine transmembrane transporter activity - - - 0.0000000000000000000000000000000000000002408 160.0
BYD3_k127_6584139_18 Belongs to the peptidase M16 family K07263 - - 0.00000000000000000000000000000000000003383 156.0
BYD3_k127_6584139_19 Ankyrin repeat - - - 0.0000000000000000000000000000000003233 149.0
BYD3_k127_6584139_2 Belongs to the thiolase family K00626,K07508 - 2.3.1.16,2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002277 456.0
BYD3_k127_6584139_20 Mycobacterial 4 TMS phage holin, superfamily IV K08972 - - 0.000000000000000000000895 110.0
BYD3_k127_6584139_21 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K00135,K00146,K07248 - 1.2.1.16,1.2.1.20,1.2.1.21,1.2.1.22,1.2.1.39,1.2.1.79 0.0000000000005092 75.0
BYD3_k127_6584139_22 CYTH domain - - - 0.000004744 61.0
BYD3_k127_6584139_3 acyl-CoA dehydrogenase activity K06446 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003357 440.0
BYD3_k127_6584139_4 Dehydrogenase K00052 - 1.1.1.85 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003271 411.0
BYD3_k127_6584139_5 PFAM Isocitrate isopropylmalate dehydrogenase K00030 - 1.1.1.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000403 389.0
BYD3_k127_6584139_6 3-hydroxyacyl-CoA dehydrogenase domain protein K00074 - 1.1.1.157 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001309 348.0
BYD3_k127_6584139_7 Belongs to the enoyl-CoA hydratase isomerase family K01715 - 4.2.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001864 323.0
BYD3_k127_6584139_8 Belongs to the enoyl-CoA hydratase isomerase family K01715 - 4.2.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000002918 270.0
BYD3_k127_6584139_9 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 0.000000000000000000000000000000000000000000000000000000000000000000001149 258.0
BYD3_k127_6589354_0 Amp-dependent synthetase and ligase K01897 - 6.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003747 514.0
BYD3_k127_6589354_1 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001519 451.0
BYD3_k127_6589354_10 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000000000000000000143 160.0
BYD3_k127_6589354_11 cog cog0451 K00091 - 1.1.1.219 0.0000000000000000000000000000461 133.0
BYD3_k127_6589354_12 PFAM PHP domain protein K01104 - 3.1.3.48 0.00000000000000000000000000006029 133.0
BYD3_k127_6589354_14 Belongs to the ompA family K03286 - - 0.000000000000002256 87.0
BYD3_k127_6589354_15 - - - - 0.00002678 49.0
BYD3_k127_6589354_16 chlorophyll binding K03286,K07275 GO:0005575,GO:0005623,GO:0009279,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0044462,GO:0044464,GO:0071944 - 0.00002755 55.0
BYD3_k127_6589354_2 Integral membrane protein TerC family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000571 335.0
BYD3_k127_6589354_3 Electron transfer flavoprotein FAD-binding domain K03522 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005134 305.0
BYD3_k127_6589354_4 ECF sigma factor K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007199 277.0
BYD3_k127_6589354_5 COG4257 Streptogramin lyase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000155 289.0
BYD3_k127_6589354_6 Electron transfer flavoprotein K03521 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005769 267.0
BYD3_k127_6589354_7 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0030312,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:0140097,GO:1901360,GO:1901363 4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000000002045 258.0
BYD3_k127_6589354_8 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000002776 192.0
BYD3_k127_6589354_9 - - - - 0.00000000000000000000000000000000000000000000000004513 199.0
BYD3_k127_6607584_0 TIGRFAM transporter, hydrophobe amphiphile efflux-1 (HAE1) family K18902 - - 0.0 1416.0
BYD3_k127_6607584_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K18298,K19586 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006506 395.0
BYD3_k127_6607584_2 Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004277 385.0
BYD3_k127_6607584_3 carboxylic acid catabolic process K01776,K02549,K19802 GO:0008150,GO:0040007 4.2.1.113,5.1.1.20,5.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000001794 236.0
BYD3_k127_6607584_4 - - - - 0.00000000000000000000000000000000000000000000000000000000001949 212.0
BYD3_k127_6607584_5 WHG domain - - - 0.0000000000000000000000000000000000000000000000000002515 193.0
BYD3_k127_6607584_6 phosphoprotein phosphatase activity K14680 - 6.5.1.3 0.00000000000000000000000000000000000000000000008704 180.0
BYD3_k127_6607584_7 YjbR - - - 0.0000000000000000004135 93.0
BYD3_k127_6607584_8 PFAM GCN5-related N-acetyltransferase - - - 0.00002085 55.0
BYD3_k127_6607584_9 FR47-like protein - - - 0.00007004 55.0
BYD3_k127_6628585_0 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 6.967e-200 643.0
BYD3_k127_6628585_1 Endoribonuclease that initiates mRNA decay K18682 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004642 545.0
BYD3_k127_6628585_10 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 GO:0000166,GO:0003674,GO:0003824,GO:0003951,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006741,GO:0006753,GO:0006766,GO:0006767,GO:0006769,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008976,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009820,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016776,GO:0017076,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043603,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046496,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0051287,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:0097159,GO:0097367,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.7.1.23 0.000000000000000000000000000000000000000000000000002306 199.0
BYD3_k127_6628585_11 protein kinase activity K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000003463 206.0
BYD3_k127_6628585_12 PFAM Adenylate and Guanylate cyclase catalytic domain - - - 0.00000000000000000000000000000000000000000000001533 198.0
BYD3_k127_6628585_13 protein kinase activity K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000111 189.0
BYD3_k127_6628585_14 Helix-turn-helix domain - - - 0.0000000000000000000000000000000000000000001066 169.0
BYD3_k127_6628585_15 protein kinase activity K12132 - 2.7.11.1 0.00000000000000000000000000000000000000006341 175.0
BYD3_k127_6628585_16 glyoxalase III activity - - - 0.000000000000001108 89.0
BYD3_k127_6628585_17 CDP-alcohol phosphatidyltransferase K00995,K08744 GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005623,GO:0006629,GO:0006644,GO:0006650,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008444,GO:0008610,GO:0008654,GO:0009058,GO:0009987,GO:0016740,GO:0016772,GO:0016780,GO:0017169,GO:0019637,GO:0030312,GO:0040007,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044464,GO:0045017,GO:0046474,GO:0046486,GO:0071704,GO:0071944,GO:0090407,GO:1901576 2.7.8.41,2.7.8.5 0.000000002523 68.0
BYD3_k127_6628585_18 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.0000002412 59.0
BYD3_k127_6628585_19 Recombinase zinc beta ribbon domain - - - 0.0006633 47.0
BYD3_k127_6628585_2 Histidine kinase A domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008341 377.0
BYD3_k127_6628585_3 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009671 337.0
BYD3_k127_6628585_4 May be involved in recombinational repair of damaged DNA K03631 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004513 317.0
BYD3_k127_6628585_5 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000019 310.0
BYD3_k127_6628585_6 PFAM Metallophosphoesterase K09769 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004113 306.0
BYD3_k127_6628585_7 Thymidine kinase K00857 - 2.7.1.21 0.00000000000000000000000000000000000000000000000000000000000005297 224.0
BYD3_k127_6628585_8 PFAM Adenylate and Guanylate cyclase catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000002671 222.0
BYD3_k127_6628585_9 Belongs to the FPP GGPP synthase family K00795 - 2.5.1.1,2.5.1.10 0.000000000000000000000000000000000000000000000000001515 200.0
BYD3_k127_6664824_0 Methyltransferase K06969 - 2.1.1.191 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001153 351.0
BYD3_k127_6664824_1 Galactose oxidase, central domain - - - 0.000000000000000000000000000000000000000000000000004782 205.0
BYD3_k127_6664824_2 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.0000000000000000000000000000000000000000000000005802 189.0
BYD3_k127_6664824_3 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 - - 0.000000000000000000000000000000000000000000002702 166.0
BYD3_k127_6664824_4 Belongs to the HesB IscA family K13628 - - 0.000000000000000000000006865 105.0
BYD3_k127_6682831_0 Provides the (R)-glutamate required for cell wall biosynthesis K01776 - 5.1.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005591 301.0
BYD3_k127_6682831_1 NmrA-like family K01784 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000000000002899 214.0
BYD3_k127_6682831_2 - - - - 0.000000000000000000000000000000000000000000000000008422 203.0
BYD3_k127_6682831_3 UDP-2,3-diacylglucosamine hydrolase K03269 - 3.6.1.54 0.00000000000000000000000000000000000000005087 161.0
BYD3_k127_6682831_4 phosphatidate phosphatase activity K00901,K01096,K19302 - 2.7.1.107,3.1.3.27,3.1.3.4,3.1.3.81,3.6.1.27 0.000000000000000000000000000000003709 147.0
BYD3_k127_6754725_0 endonuclease activity K07451 - - 2.725e-265 826.0
BYD3_k127_6754725_1 PFAM Acyl-CoA dehydrogenase, C-terminal domain - - - 3.469e-206 650.0
BYD3_k127_6754725_10 PFAM Methyltransferase type 11 - - - 0.0000000000000000000000000000000000000000000000000000000006516 211.0
BYD3_k127_6754725_13 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 GO:0001871,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0009986,GO:0030246,GO:0030247,GO:0043021,GO:0043022,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:2001065 - 0.000000000000000000000000000000000006029 140.0
BYD3_k127_6754725_14 Domain of unknown function DUF11 - - - 0.0000000000000000000000000001044 133.0
BYD3_k127_6754725_15 - - - - 0.000000000000000004958 96.0
BYD3_k127_6754725_16 cytochrome - - - 0.0000000000000004611 91.0
BYD3_k127_6754725_2 helix_turn_helix gluconate operon transcriptional repressor K00375 - - 2.907e-202 640.0
BYD3_k127_6754725_3 Flavocytochrome c sulphide dehydrogenase, flavin-binding K05301,K17218 - 1.8.2.1,1.8.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001935 496.0
BYD3_k127_6754725_4 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006263 441.0
BYD3_k127_6754725_5 PFAM peptidase S8 and S53, subtilisin, kexin, sedolisin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001782 431.0
BYD3_k127_6754725_6 radical SAM domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001839 339.0
BYD3_k127_6754725_7 Nadph-dependent fmn reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001323 305.0
BYD3_k127_6754725_8 Related to pyridoxine 5'-phosphate oxidase K07006 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003791 273.0
BYD3_k127_6754725_9 Protein of unknown function (DUF3494) K11904 - - 0.00000000000000000000000000000000000000000000000000000000000000000000006533 262.0
BYD3_k127_6842096_0 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006532 400.0
BYD3_k127_6842096_1 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001106 370.0
BYD3_k127_6842096_2 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005868 314.0
BYD3_k127_6842096_3 Involved in the biosynthesis of porphyrin-containing compound - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002623 272.0
BYD3_k127_6842096_4 Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide K08641 - 3.4.13.22 0.0000000000000000000000000000000000000000000000000000000000000000004532 239.0
BYD3_k127_6842096_5 TIGRFAM DNA protecting protein DprA K04096 - - 0.000000000000000000000000000000000000000000000000000002813 218.0
BYD3_k127_6842096_6 Ribosomal protein L11 methyltransferase K02687 - - 0.000000000000000000000000002743 129.0
BYD3_k127_6842096_7 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.0000000000000000001933 102.0
BYD3_k127_6842096_8 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration - - - 0.00000000000001868 85.0
BYD3_k127_6885268_0 PFAM Amino acid permease K03294 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001047 530.0
BYD3_k127_6885268_1 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S K00311 - 1.5.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002378 525.0
BYD3_k127_6885268_2 PFAM Peptidase family M48 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001412 338.0
BYD3_k127_6885268_3 Ion channel K10716 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001609 327.0
BYD3_k127_6885268_4 Membrane dipeptidase (Peptidase family M19) K01273 - 3.4.13.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001616 305.0
BYD3_k127_6885268_5 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000001411 247.0
BYD3_k127_6885268_6 Conserved TM helix - - - 0.0000000000000000000000000000000000000000000000000000313 196.0
BYD3_k127_6885268_7 Dolichyl-phosphate-mannose-protein mannosyltransferase K14340 - - 0.00000000000009431 84.0
BYD3_k127_6885268_8 COG1335 Amidases related to nicotinamidase K08687 - 3.5.1.59 0.00000001646 58.0
BYD3_k127_6898754_0 Beta-ketoacyl synthase, C-terminal domain K09458 - 2.3.1.179 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002075 421.0
BYD3_k127_6898754_1 Type II/IV secretion system protein K02669 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001478 388.0
BYD3_k127_6898754_2 Calcineurin-like phosphoesterase - - - 0.000000000000000000000000000000000000000000000000000000000002695 229.0
BYD3_k127_6898754_3 Cyclic nucleotide-monophosphate binding domain K03301 - - 0.0000000000000000007229 103.0
BYD3_k127_6898754_4 serine threonine protein kinase - - - 0.00000000006881 74.0
BYD3_k127_6898754_5 lysine biosynthesis protein LysW K05826 - - 0.0001398 49.0
BYD3_k127_6920952_0 Phosphate transporter family K03306 GO:0003674,GO:0005215,GO:0005315,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006817,GO:0006820,GO:0008150,GO:0015291,GO:0015318,GO:0015698,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0035435,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0098656,GO:0098660,GO:0098661 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002764 359.0
BYD3_k127_6920952_1 PFAM Squalene phytoene synthase - - - 0.000000000000000000000000000000000000000000000000005079 202.0
BYD3_k127_6920952_2 Squalene/phytoene synthase K02291 - 2.5.1.32,2.5.1.99 0.00000000000000000000000000000000000000000000002634 187.0
BYD3_k127_6920952_3 Protein of unknown function DUF47 K02039,K07220 - - 0.000000000000000000000000000000000000000001374 170.0
BYD3_k127_6920952_4 Subtilase family K01342 - 3.4.21.62 0.000000000000000000000000000000000001469 155.0
BYD3_k127_6920952_5 methylated DNA-protein cysteine methyltransferase K07443 - - 0.0000000000000000008934 97.0
BYD3_k127_6920952_6 Protein of unknown function (DUF1402) - - - 0.0000000000001592 81.0
BYD3_k127_6930145_0 amine dehydrogenase activity K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002943 610.0
BYD3_k127_6930145_1 Peptidogalycan biosysnthesis/recognition - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003227 398.0
BYD3_k127_6930145_2 COG3901 Regulator of nitric oxide reductase transcription K19339,K19343 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001659 389.0
BYD3_k127_6930145_3 Domain of unknown function (DUF362) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002353 259.0
BYD3_k127_6930145_4 Bacterial sugar transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000002127 240.0
BYD3_k127_6930145_5 COG0110 Acetyltransferase (isoleucine patch superfamily) K21379 - 2.3.1.209 0.00000000000000000000000000000000000005746 152.0
BYD3_k127_7005542_0 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses K04618 - 1.1.3.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000602 433.0
BYD3_k127_7005542_1 Staphylococcal nuclease homologues K01174,K01286 - 3.1.31.1,3.4.16.4 0.00000000000000000000000000000000000000000000000000002213 203.0
BYD3_k127_7005542_2 Belongs to the peptidase S8 family - - - 0.000000000000000000259 92.0
BYD3_k127_7005542_3 pectinesterase activity - - - 0.0000000000001203 84.0
BYD3_k127_7005542_4 MatE - - - 0.0000000000008955 81.0
BYD3_k127_71182_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 2.417e-266 829.0
BYD3_k127_71182_1 Protein tyrosine kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001086 606.0
BYD3_k127_71182_10 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 - 2.5.1.75 0.000000000000000000000000000000000000000001473 181.0
BYD3_k127_71182_11 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.00000000000000000000000000000000000000007647 172.0
BYD3_k127_71182_12 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0009987,GO:0010033,GO:0016032,GO:0016465,GO:0019058,GO:0019068,GO:0032991,GO:0035966,GO:0042221,GO:0042802,GO:0043167,GO:0043169,GO:0044403,GO:0044419,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046872,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0051704,GO:0061077,GO:0101031,GO:1990220 - 0.000000000000000000000000000000000005278 139.0
BYD3_k127_71182_13 cell wall organization K01051,K21449 - 3.1.1.11 0.0000000003843 73.0
BYD3_k127_71182_14 Tetratricopeptide repeat - - - 0.00005615 53.0
BYD3_k127_71182_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005538 446.0
BYD3_k127_71182_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006606 393.0
BYD3_k127_71182_4 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000223 382.0
BYD3_k127_71182_5 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002777 352.0
BYD3_k127_71182_6 Belongs to the NadC ModD family K00767 - 2.4.2.19 0.0000000000000000000000000000000000000000000000000000000000000000000000002226 280.0
BYD3_k127_71182_7 PFAM Peptidase M23 - - - 0.000000000000000000000000000000000000000000000247 181.0
BYD3_k127_71182_8 ECF sigma factor - - - 0.00000000000000000000000000000000000000000001114 173.0
BYD3_k127_71182_9 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.0000000000000000000000000000000000000000002128 182.0
BYD3_k127_7155155_0 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 - 2.7.7.56 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006055 286.0
BYD3_k127_7155155_1 Permease MlaE K02066 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004925 257.0
BYD3_k127_7155155_2 ABC transporter K02065 - - 0.000000000000000000000000000000000000000000000000000000009758 220.0
BYD3_k127_7155155_3 amino acid activation for nonribosomal peptide biosynthetic process K05996 - 3.4.17.18 0.0000000000000000000000000000000000000000000000000000000398 224.0
BYD3_k127_7155155_4 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 - 3.6.1.66 0.00000000000000000000000000000000000000000000000554 180.0
BYD3_k127_7155155_5 - - - - 0.00000000000000000000000000000000000000000000001485 189.0
BYD3_k127_7155155_6 Histidine kinase K08082 - 2.7.13.3 0.000000000000000000000000000000000000000002894 166.0
BYD3_k127_7155155_7 MlaD protein K02067 - - 0.000000000000000000000000000000000000000008366 174.0
BYD3_k127_7155155_8 Protein of unknown function (DUF3565) - - - 0.00000000000000000000000008051 109.0
BYD3_k127_7155155_9 Phospholipid methyltransferase - - - 0.0000000000000000000001067 103.0
BYD3_k127_7165609_0 TIGRFAM methylmalonyl-CoA mutase N-terminal domain K01848 - 5.4.99.2 3.344e-227 726.0
BYD3_k127_7165609_1 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003074 533.0
BYD3_k127_7165609_10 - - - - 0.00003634 54.0
BYD3_k127_7165609_2 Belongs to the thiolase family K00626 - 2.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004539 486.0
BYD3_k127_7165609_3 Bacterial regulatory protein, Fis family K07713 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002468 463.0
BYD3_k127_7165609_4 PFAM Acyl-CoA dehydrogenase, C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002741 399.0
BYD3_k127_7165609_5 ArgK protein K07588 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001063 282.0
BYD3_k127_7165609_6 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008731 291.0
BYD3_k127_7165609_7 PFAM ATP-binding region, ATPase domain protein K02668,K07708,K07709 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000002374 261.0
BYD3_k127_7165609_8 B12 binding domain K01849 - 5.4.99.2 0.0000000000000000000000000000000000000000000000000000000002284 205.0
BYD3_k127_7165609_9 - - - - 0.00000000346 70.0
BYD3_k127_7184362_0 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 - - 5.637e-234 739.0
BYD3_k127_7184362_1 carboxyl transferase K01966 - 2.1.3.15,6.4.1.3 5.955e-227 713.0
BYD3_k127_7184362_10 DnaK suppressor protein - - - 0.00000004095 60.0
BYD3_k127_7184362_2 Methylmalonyl-CoA mutase K01848 - 5.4.99.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000118 624.0
BYD3_k127_7184362_3 Biotin carboxylase C-terminal domain K01961 - 6.3.4.14,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004769 433.0
BYD3_k127_7184362_4 TIGRFAM arginyl-tRNA synthetase K01887 GO:0003674,GO:0003824,GO:0004812,GO:0004814,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006420,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002158 364.0
BYD3_k127_7184362_5 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 GO:0003674,GO:0003824,GO:0003866,GO:0006082,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0019752,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046417,GO:0071704,GO:1901576 2.5.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003426 341.0
BYD3_k127_7184362_6 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 - 2.7.4.25 0.00000000000000000000000000000001872 145.0
BYD3_k127_7184362_7 Putative regulatory protein - - - 0.00000000000000003449 90.0
BYD3_k127_7184362_8 LppC putative lipoprotein K07121 - - 0.00000000000001109 88.0
BYD3_k127_7184362_9 Biotin-requiring enzyme - - - 0.000000001733 69.0
BYD3_k127_7230572_0 Enoyl-(Acyl carrier protein) reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007476 414.0
BYD3_k127_7230572_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001028 398.0
BYD3_k127_7230572_2 DNA-3-methyladenine glycosylase I K01246 - 3.2.2.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002863 291.0
BYD3_k127_7230572_3 hydrolase of the alpha beta-hydrolase fold K07020 - - 0.00000000000000000000000000000000000000000000000000000000000000005773 229.0
BYD3_k127_7230572_4 Protein of unknown function (DUF3298) - - - 0.000000000000000000000000000002992 138.0
BYD3_k127_7230572_5 - - - - 0.000000000000000000000003506 115.0
BYD3_k127_7230694_0 Alpha-amylase domain K05343 - 3.2.1.1,5.4.99.16 4.834e-290 942.0
BYD3_k127_7230694_1 hydrolase activity, hydrolyzing O-glycosyl compounds K16147 - 2.4.99.16 5.396e-257 813.0
BYD3_k127_7230694_2 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 - 2.4.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000288 430.0
BYD3_k127_7230694_3 Peptide nickel ABC transporter, substrate-binding protein K02035 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001126 329.0
BYD3_k127_7230694_4 Creatinase/Prolidase N-terminal domain K01271,K01274 - 3.4.13.9 0.000000000000000000000000000000000000000000000001084 199.0
BYD3_k127_724490_0 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 2.774e-195 620.0
BYD3_k127_724490_1 MgsA AAA+ ATPase C terminal K07478 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001292 514.0
BYD3_k127_724490_10 Type II secretion system (T2SS), protein G K02456 - - 0.0000000000000000000000000000000000000000000002555 187.0
BYD3_k127_724490_11 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000601 161.0
BYD3_k127_724490_12 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 GO:0000966,GO:0000967,GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0004529,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008296,GO:0008408,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016787,GO:0016788,GO:0016796,GO:0016895,GO:0022613,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0040007,GO:0042254,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0140097,GO:1901360 - 0.0000000000000000000000000000007573 130.0
BYD3_k127_724490_13 protein secretion K02460 - - 0.000000000000000000008475 107.0
BYD3_k127_724490_2 PFAM Type II secretion system protein E K02454 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002139 499.0
BYD3_k127_724490_3 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001681 368.0
BYD3_k127_724490_4 PolyA polymerase K00974 - 2.7.7.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001436 315.0
BYD3_k127_724490_5 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003394 307.0
BYD3_k127_724490_6 Type II secretion system (T2SS), protein F K02455,K02653 GO:0002790,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008104,GO:0008150,GO:0009306,GO:0009987,GO:0015031,GO:0015628,GO:0015833,GO:0016020,GO:0032940,GO:0033036,GO:0042886,GO:0044464,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0098776 - 0.000000000000000000000000000000000000000000000000000000000000000000000000001115 287.0
BYD3_k127_724490_7 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.0000000000000000000000000000000000000000000000000000000000000000008327 248.0
BYD3_k127_724490_8 Belongs to the DNA glycosylase MPG family K03652 - 3.2.2.21 0.00000000000000000000000000000000000000000000000000000001296 221.0
BYD3_k127_724490_9 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000000000000002914 204.0
BYD3_k127_7277205_0 PFAM regulatory protein LuxR - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002318 455.0
BYD3_k127_7277205_1 Beta-eliminating lyase K01620 - 4.1.2.48 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002864 440.0
BYD3_k127_7277205_2 Molybdopterin oxidoreductase Fe4S4 domain K08357 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008835 308.0
BYD3_k127_7277205_3 Aldolase/RraA - - - 0.000000000000000000000000000000000000000000000000000000000001203 214.0
BYD3_k127_7277205_4 Cytochrome c7 and related cytochrome c - - - 0.0000000000000000000000000000000000000000001375 166.0
BYD3_k127_7277205_5 Protein of unknown function (DUF1059) - - - 0.000000000000000007554 85.0
BYD3_k127_7277205_6 Protein of unknown function (DUF1059) - - - 0.00000000004313 68.0
BYD3_k127_7371190_0 General secretory system II, protein E domain protein K02652 - - 1.119e-200 641.0
BYD3_k127_7371190_1 Type II/IV secretion system protein K02669 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001758 533.0
BYD3_k127_7371190_2 Type II secretion system (T2SS), protein F K02653 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008996 470.0
BYD3_k127_7371190_3 Two component, sigma54 specific, transcriptional regulator, Fis family K02667,K07713,K07714,K19641 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008462 423.0
BYD3_k127_7371190_4 antibiotic catabolic process K18235 - - 0.00000000000000000000000000000000000000000000000000000000000000000002148 253.0
BYD3_k127_7371190_5 PFAM ATP-binding region, ATPase domain protein K02668,K07708,K07709 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000009705 230.0
BYD3_k127_7371190_6 helix-hairpin-helix K02237 - - 0.0000000000000003762 84.0
BYD3_k127_7371190_7 Competence protein ComEA K02237 - - 0.000000002169 64.0
BYD3_k127_7403362_0 Sigma-54 factor, Activator interacting domain (AID) K03092 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001769 498.0
BYD3_k127_7403362_1 Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr) K06023 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000679 352.0
BYD3_k127_7403362_2 ABC transporter K06861 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006984 321.0
BYD3_k127_7403362_3 PTS system sorbose subfamily IIB component K19507 - - 0.000000000000000000006202 101.0
BYD3_k127_7403362_4 - - - - 0.00000000000000000001367 104.0
BYD3_k127_7403362_5 COG1544 Ribosome-associated protein Y (PSrp-1) K05808 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006417,GO:0006448,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0015935,GO:0017148,GO:0019222,GO:0022626,GO:0022627,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032991,GO:0034248,GO:0034249,GO:0043021,GO:0043022,GO:0043024,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0044877,GO:0045900,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0080090,GO:1990904,GO:2000112,GO:2000113 - 0.000000453 63.0
BYD3_k127_7403362_6 PTS system mannose fructose sorbose family IID component K02796 - - 0.00002851 55.0
BYD3_k127_7403362_7 PTS system fructose IIA component K02793 - 2.7.1.191 0.00004022 56.0
BYD3_k127_7463022_0 Hsp70 protein K03569 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007896 522.0
BYD3_k127_7463022_1 Alanine dehydrogenase/PNT, N-terminal domain K00259 - 1.4.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001175 500.0
BYD3_k127_7463022_2 Penicillin-binding Protein dimerisation domain K05515 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009008 489.0
BYD3_k127_7463022_3 Cell cycle protein K05837 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005996 326.0
BYD3_k127_7463022_4 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA K01520 - 3.6.1.23 0.000000000000000000000000000000000000000000000001328 178.0
BYD3_k127_7463022_5 Involved in formation and maintenance of cell shape K03570 - - 0.0000000000000000000000003666 122.0
BYD3_k127_7463022_6 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 0.0000000000003038 72.0
BYD3_k127_7463022_7 Rod shape-determining protein (MreD) K03571 - - 0.0000002851 63.0
BYD3_k127_7560867_0 TonB-dependent receptor - - - 3.62e-259 840.0
BYD3_k127_7560867_1 Protein involved in amylo-alpha-1,6-glucosidase activity and glycogen biosynthetic process - - - 6.523e-247 785.0
BYD3_k127_7560867_2 KR domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001443 399.0
BYD3_k127_7560867_3 Bacterial extracellular solute-binding protein K02055,K05777 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003538 335.0
BYD3_k127_7560867_4 TOBE domain K02017,K02052 - 3.6.3.29 0.00000000000000000000000000000000000000000000000000000000503 225.0
BYD3_k127_7560867_5 Belongs to the CDP-alcohol phosphatidyltransferase class-I family - - - 0.00000000000000000000000000000000000000000000001786 177.0
BYD3_k127_7560867_6 Binding-protein-dependent transport system inner membrane component K02053 - - 0.00000000000000000000000000000005326 145.0
BYD3_k127_7560867_7 putrescine transport K02054 - - 0.0000000000000000000000558 111.0
BYD3_k127_7625385_0 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 GO:0000270,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008963,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016020,GO:0016740,GO:0016772,GO:0016780,GO:0030203,GO:0034645,GO:0040007,GO:0042546,GO:0042802,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0044464,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:0071944,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 2.7.8.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001259 487.0
BYD3_k127_7625385_1 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K15792 - 6.3.2.10,6.3.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004431 431.0
BYD3_k127_7625385_2 Belongs to the MurCDEF family K01924 - 6.3.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004024 384.0
BYD3_k127_7625385_3 PASTA domain K03587 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002203 378.0
BYD3_k127_7625385_4 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0070475,GO:0071424,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.199 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000159 299.0
BYD3_k127_7625385_5 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006302 313.0
BYD3_k127_7625385_6 TIGRFAM stage V sporulation protein E, cell division protein FtsW K03588 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001132 301.0
BYD3_k127_7625385_7 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.00000000000000000000000000000000000000000000000000000000000000001515 253.0
BYD3_k127_7625385_8 Cell wall formation K00075 - 1.3.1.98 0.0000000000000000000000000000000000000000000000002241 202.0
BYD3_k127_7625385_9 Belongs to the MraZ family K03925 - - 0.000000000000000000000001264 109.0
BYD3_k127_7629815_0 TIGRFAM FeS assembly protein SufB K07033,K09014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004117 447.0
BYD3_k127_7629815_1 ATPase associated with various cellular K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004839 425.0
BYD3_k127_7629815_10 Transcriptional regulator - - - 0.000000000000000000000000000000000004125 158.0
BYD3_k127_7629815_11 Major Facilitator Superfamily K03301 - - 0.0000000000000000000000002563 121.0
BYD3_k127_7629815_12 Rhodanese Homology Domain - - - 0.000000000000003183 90.0
BYD3_k127_7629815_13 OsmC-like protein K06889,K07397 - - 0.000000001763 64.0
BYD3_k127_7629815_14 - - - - 0.00002077 52.0
BYD3_k127_7629815_15 Psort location CytoplasmicMembrane, score - - - 0.00007364 56.0
BYD3_k127_7629815_2 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003356 357.0
BYD3_k127_7629815_3 COG0396 ABC-type transport system involved in Fe-S cluster assembly ATPase component K09013 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001936 321.0
BYD3_k127_7629815_4 Belongs to the RimK family K05844,K14940 - 6.3.2.32 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003769 328.0
BYD3_k127_7629815_5 protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003866 326.0
BYD3_k127_7629815_6 von Willebrand factor (vWF) type A domain K07114,K12511 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003083 274.0
BYD3_k127_7629815_7 succinylglutamate desuccinylase aspartoacylase K06987 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002778 269.0
BYD3_k127_7629815_8 Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin K01151 GO:0003674,GO:0003824,GO:0003906,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008081,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016788,GO:0033554,GO:0034641,GO:0042578,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 3.1.21.2 0.0000000000000000000000000000000000000000000000000000000000000000000000002955 264.0
BYD3_k127_7629815_9 DNA internalization-related competence protein ComEC Rec2 K02238 - - 0.000000000000000000000000000000000000000000000000000000000000235 241.0
BYD3_k127_7654775_0 ABC transporter K06147,K06148 - - 1.806e-261 821.0
BYD3_k127_7654775_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 - 2.7.7.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001538 311.0
BYD3_k127_7654775_2 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001984 285.0
BYD3_k127_7654775_3 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 - - 0.0000000000000000000000000000000000000000000000000000002662 196.0
BYD3_k127_7654775_4 Protein-disulfide isomerase - - - 0.000000000000000000000000000000000113 154.0
BYD3_k127_7654775_5 Glycosyl hydrolase-like 10 - - - 0.0000000000000000000000000000000005874 147.0
BYD3_k127_7654775_6 PFAM ribosomal protein L17 K02879 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000002521 135.0
BYD3_k127_7654775_7 belongs to the sigma-70 factor family, ECF subfamily K03088 - - 0.00000000000006713 79.0
BYD3_k127_7688857_0 Glutamine synthetase, catalytic domain K01915 - 6.3.1.2 1.485e-222 704.0
BYD3_k127_7688857_1 Amino acid permease K03294 - - 4.996e-202 652.0
BYD3_k127_7688857_10 IMP dehydrogenase activity - - - 0.00000000000000000000000000001033 123.0
BYD3_k127_7688857_11 Outer membrane efflux protein K12340 - - 0.0000000000002563 83.0
BYD3_k127_7688857_12 peptidyl-tyrosine sulfation - - - 0.00000004133 66.0
BYD3_k127_7688857_13 Gram-negative bacterial TonB protein C-terminal - - - 0.0001337 53.0
BYD3_k127_7688857_14 PFAM Flp Fap pilin component K02651 - - 0.0009967 46.0
BYD3_k127_7688857_2 Glutamine synthetase, catalytic domain K01915 - 6.3.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000921 586.0
BYD3_k127_7688857_3 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001125 410.0
BYD3_k127_7688857_4 Beta-eliminating lyase K04487 - 2.8.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007109 370.0
BYD3_k127_7688857_5 ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000802 320.0
BYD3_k127_7688857_6 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001228 325.0
BYD3_k127_7688857_7 Biotin-lipoyl like K02005 - - 0.000000000000000000000000000000000000000000000000000000000000009927 244.0
BYD3_k127_7688857_8 Zn peptidase - - - 0.00000000000000000000000000000000000000000000000001797 201.0
BYD3_k127_7688857_9 Bacterial regulatory protein, Fis family - - - 0.00000000000000000000000000000004333 139.0
BYD3_k127_7693613_0 Protein of unknown function (DUF1624) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001858 454.0
BYD3_k127_7693613_1 Domain of unknown function (DUF305) - - - 0.0000000000000000000000000000000000000000000000000000000000001741 221.0
BYD3_k127_7693613_2 - - - - 0.000000000000000000000000000000000000000000000000000008645 203.0
BYD3_k127_7693613_3 Thioesterase superfamily - - - 0.00000000000000000000000000000000000000000000000000001686 212.0
BYD3_k127_7693613_4 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 0.0000000000000000000000000000000000008591 145.0
BYD3_k127_7693613_5 peptidyl-tyrosine sulfation - - - 0.00000000000000000019 104.0
BYD3_k127_7693613_6 COG0662 Mannose-6-phosphate isomerase - - - 0.0000000291 61.0
BYD3_k127_7698617_0 protein conserved in bacteria - - - 1.655e-219 699.0
BYD3_k127_7698617_1 NADH ubiquinone oxidoreductase subunit 5 (chain L) Multisubunit Na H antiporter, MnhA subunit K00341 - 1.6.5.3 3.936e-214 683.0
BYD3_k127_7698617_10 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 GO:0003674,GO:0003824,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016491,GO:0016614,GO:0016615,GO:0016999,GO:0017144,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0055114,GO:0071704,GO:0072350 1.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002235 398.0
BYD3_k127_7698617_11 quinone binding K00337 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003887 355.0
BYD3_k127_7698617_12 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region K00336 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001089 306.0
BYD3_k127_7698617_13 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000007532 225.0
BYD3_k127_7698617_14 NADH-quinone oxidoreductase K00334 - 1.6.5.3 0.000000000000000000000000000000000000000000000832 187.0
BYD3_k127_7698617_15 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.00000000000000000000000000000000000000003698 163.0
BYD3_k127_7698617_16 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 GO:0003674,GO:0003824,GO:0003954,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564 1.6.5.3 0.00000000000000000000000000000000000000567 164.0
BYD3_k127_7698617_17 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016020,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0030964,GO:0032991,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0044425,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:0098796,GO:1901135,GO:1901360,GO:1901564,GO:1902494 1.6.5.3 0.00000000000000000000000000000001775 130.0
BYD3_k127_7698617_18 Belongs to the bacterial ribosomal protein bL27 family K02899 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000266 127.0
BYD3_k127_7698617_19 epimerase - - - 0.000000000000000000000000000004 119.0
BYD3_k127_7698617_2 proton-translocating NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000645 586.0
BYD3_k127_7698617_20 This protein binds to 23S rRNA in the presence of protein L20 K02888 - - 0.000000000000000000000000001069 117.0
BYD3_k127_7698617_21 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 - 1.6.5.3 0.0000000000000000000000001006 123.0
BYD3_k127_7698617_22 Belongs to the complex I subunit 6 family K00339 - 1.6.5.3 0.0000000000000000000000008666 112.0
BYD3_k127_7698617_23 SnoaL-like domain - - - 0.00000006578 66.0
BYD3_k127_7698617_24 beta-N-acetylhexosaminidase activity - - - 0.0000001804 63.0
BYD3_k127_7698617_3 Tetratricopeptide repeat K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008742 565.0
BYD3_k127_7698617_4 Cys/Met metabolism PLP-dependent enzyme K01739 - 2.5.1.48 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000265 516.0
BYD3_k127_7698617_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333,K13378,K13380 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016020,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044464,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0071704,GO:0071944,GO:0072521,GO:1901135,GO:1901360,GO:1901564 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000775 480.0
BYD3_k127_7698617_6 Respiratory-chain NADH dehydrogenase domain 51 kDa subunit K00334,K00335 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009644 465.0
BYD3_k127_7698617_7 Ribonuclease E/G family K08300,K08301 GO:0003674,GO:0003824,GO:0004518,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005856,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008996,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016787,GO:0016788,GO:0022613,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0140098,GO:1901360 3.1.26.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003001 453.0
BYD3_k127_7698617_8 Belongs to the GcvT family K00605 - 2.1.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002034 403.0
BYD3_k127_7698617_9 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001046 398.0
BYD3_k127_777431_0 GTPase activity K06207 GO:0000027,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006996,GO:0008150,GO:0009266,GO:0009408,GO:0009409,GO:0009628,GO:0009987,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0042254,GO:0042255,GO:0042273,GO:0043933,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0065003,GO:0070925,GO:0071826,GO:0071840 - 1.539e-264 827.0
BYD3_k127_777431_1 succinate dehydrogenase K00239 GO:0000104,GO:0000166,GO:0001539,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006091,GO:0006113,GO:0006928,GO:0006950,GO:0006974,GO:0006996,GO:0008150,GO:0008152,GO:0009055,GO:0009061,GO:0009987,GO:0015980,GO:0016020,GO:0016043,GO:0016491,GO:0016627,GO:0022607,GO:0022900,GO:0030030,GO:0030031,GO:0032991,GO:0033554,GO:0036094,GO:0040011,GO:0043167,GO:0043168,GO:0044085,GO:0044237,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0044780,GO:0044781,GO:0045273,GO:0045274,GO:0045283,GO:0045284,GO:0045333,GO:0048037,GO:0048870,GO:0050660,GO:0050662,GO:0050896,GO:0051179,GO:0051674,GO:0051716,GO:0055114,GO:0070469,GO:0070470,GO:0070925,GO:0071840,GO:0071944,GO:0071949,GO:0071973,GO:0097159,GO:0097588,GO:0098796,GO:0098797,GO:0098803,GO:1901265,GO:1901363 1.3.5.1,1.3.5.4 5.102e-261 831.0
BYD3_k127_777431_10 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell K03282 - - 0.000000000000000000000000000000001535 147.0
BYD3_k127_777431_11 very-long-chain-acyl-CoA dehydrogenase activity - - - 0.000000000000000000000000000001421 137.0
BYD3_k127_777431_12 TIGRFAM glycine betaine L-proline transport ATP binding subunit K02000 - 3.6.3.32 0.0000000007658 61.0
BYD3_k127_777431_13 Glyoxalase-like domain - - - 0.0000004239 64.0
BYD3_k127_777431_2 Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family K00240 - 1.3.5.1,1.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007645 365.0
BYD3_k127_777431_3 Glycine betaine K05845 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001145 355.0
BYD3_k127_777431_4 Subtilase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003377 323.0
BYD3_k127_777431_5 membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000817 301.0
BYD3_k127_777431_6 Lanthionine synthetase C family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001688 291.0
BYD3_k127_777431_7 CorA-like Mg2+ transporter protein K03284 - - 0.000000000000000000000000000000000000000000000000000000000000000002012 240.0
BYD3_k127_777431_8 PFAM Adenylate and Guanylate cyclase catalytic domain - - - 0.0000000000000000000000000000000000000000000000000008358 210.0
BYD3_k127_777431_9 protein kinase activity K12132 - 2.7.11.1 0.000000000000000000000000000000000005887 158.0
BYD3_k127_7821593_0 Belongs to the RimK family K05827,K05844 - 6.3.2.43 0.0000000000000000000000000000000000000000000000000000000000000000000000000000009742 278.0
BYD3_k127_7821593_1 PFAM Methylene-tetrahydromethanopterin dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007133 271.0
BYD3_k127_7821593_10 ATP-grasp domain - - - 0.00000001202 59.0
BYD3_k127_7821593_2 PFAM Formaldehyde-activating enzyme (Fae) K10713 - 4.2.1.147 0.0000000000000000000000000000000000000000000000000000000000000000001207 238.0
BYD3_k127_7821593_3 Dehydrogenases with different specificities (Related to short-chain alcohol dehydrogenases) K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000284 238.0
BYD3_k127_7821593_4 ATP:dephospho-CoA triphosphoribosyl transferase K05966 - 2.4.2.52 0.000000000000000000000000000000000000000000000000000000000000000001066 239.0
BYD3_k127_7821593_5 H4MPT-linked C1 transfer pathway protein K07072 - 2.5.1.131 0.00000000000000000000000000000000000000000000000000000639 207.0
BYD3_k127_7821593_6 Pterin 4 alpha carbinolamine dehydratase K01724 - 4.2.1.96 0.000000000000000000000000000000000000000000000000004688 187.0
BYD3_k127_7821593_7 dihydropteroate synthase - - - 0.000000000000000000000000000000000000002552 151.0
BYD3_k127_7821593_8 Pfam ATP-grasp domain K06914 - 6.3.4.24 0.0000000000000000000000000000000000002786 154.0
BYD3_k127_7821593_9 - K01633,K07144 - 1.13.11.81,2.7.4.31,4.1.2.25,5.1.99.8 0.00000000000000006376 95.0
BYD3_k127_7865269_0 epimerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001308 487.0
BYD3_k127_7865269_1 - - - - 0.00000000000000000000000000000000000000000000000000000000006734 213.0
BYD3_k127_7865269_2 Aspartyl protease - - - 0.000000000000001258 91.0
BYD3_k127_7870450_0 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K15975 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002646 356.0
BYD3_k127_7870450_1 Calcineurin-like phosphoesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001579 266.0
BYD3_k127_7903808_0 Belongs to the PEP-utilizing enzyme family K01006 - 2.7.9.1 0.0 1063.0
BYD3_k127_7903808_1 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 5.55e-212 710.0
BYD3_k127_7903808_10 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 - 3.4.21.88 0.000000000000000000000000000000000000000000000000000002871 198.0
BYD3_k127_7903808_11 Belongs to the TrpC family K01609,K13498 - 4.1.1.48,5.3.1.24 0.00000000000000000000000000000000000000000000007815 178.0
BYD3_k127_7903808_12 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 - 5.4.99.12 0.0000000000000000000000000000000000000000000005092 189.0
BYD3_k127_7903808_13 HEAT repeats - - - 0.0000000000000000000000000000000001035 155.0
BYD3_k127_7903808_14 N-(5'phosphoribosyl)anthranilate (PRA) isomerase K01817 - 5.3.1.24 0.0000000000000000000000000000002005 139.0
BYD3_k127_7903808_15 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.0000000000000000003194 89.0
BYD3_k127_7903808_16 - - - - 0.000000000000004726 84.0
BYD3_k127_7903808_2 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002666 522.0
BYD3_k127_7903808_3 tryptophan synthase activity K01696 GO:0000162,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.2.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001277 496.0
BYD3_k127_7903808_4 PFAM Sodium calcium exchanger protein K07300 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000319 318.0
BYD3_k127_7903808_5 Trypsin K04771 - 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003265 332.0
BYD3_k127_7903808_6 SAICAR synthetase K01923 - 6.3.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001287 308.0
BYD3_k127_7903808_7 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007599 302.0
BYD3_k127_7903808_8 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766 - 2.4.2.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002253 289.0
BYD3_k127_7903808_9 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 - 2.2.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000002399 266.0
BYD3_k127_790645_0 DNA polymerase K02337,K14162 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008807 400.0
BYD3_k127_790645_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007661 375.0
BYD3_k127_790645_2 metallopeptidase activity K01993,K13408,K16922 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001608 351.0
BYD3_k127_790645_3 DNA polymerase K02337,K14162 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000002592 273.0
BYD3_k127_790645_4 Acetyltransferase (GNAT) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000009365 246.0
BYD3_k127_790645_5 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K01993,K16922 - - 0.00000000000000000000000000000000000000000000000000000000000000506 240.0
BYD3_k127_790645_6 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K06996 - - 0.000000000000000000000000000002026 125.0
BYD3_k127_790645_7 SMART cyclic nucleotide-binding K10914 - - 0.00000000000000000000005178 116.0
BYD3_k127_790645_8 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000000000000713 105.0
BYD3_k127_790645_9 Protein of unknown function (DUF1697) - - - 0.000006302 56.0
BYD3_k127_7910091_0 Formylmethanofuran dehydrogenase subunit A K00200 GO:0003674,GO:0003824,GO:0006730,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016810,GO:0044237,GO:0044281 1.2.7.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002797 608.0
BYD3_k127_7910091_1 Catalyzes the transfer of a formyl group from 5-formyl tetrahydromethanopterin (5-formyl-H(4)MPT) to methanofuran (MFR) so as to produce formylmethanofuran (formyl-MFR) and tetrahydromethanopterin (H(4)MPT) K00672 - 2.3.1.101 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001014 358.0
BYD3_k127_7910091_2 formylmethanofuran dehydrogenase, subunit K00201 - 1.2.7.12 0.00000000000000000000000000000000000000000000000000000000442 223.0
BYD3_k127_7910091_3 Dioxygenase K03381 - 1.13.11.1 0.0000000000000000000000000000000000000001646 159.0
BYD3_k127_7910091_4 ATP-grasp domain - - - 0.00000000000000000000000001812 119.0
BYD3_k127_7945323_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K11326 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001181 557.0
BYD3_k127_7945323_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001029 378.0
BYD3_k127_7945323_10 Glycosyl transferase family 21 - - - 0.00000000000000000002982 106.0
BYD3_k127_7945323_11 Oxidoreductase family, C-terminal alpha/beta domain - - - 0.0000000000000000002651 103.0
BYD3_k127_7945323_12 Signal transduction histidine kinase, subgroup 1, dimerisation phosphoacceptor domain - - - 0.00000000000000000107 96.0
BYD3_k127_7945323_13 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798 - - 0.0000000000009147 81.0
BYD3_k127_7945323_14 Binding-protein-dependent transport system inner membrane component K02011 - - 0.00000000009122 75.0
BYD3_k127_7945323_15 Outer membrane efflux protein K15725 - - 0.0004341 52.0
BYD3_k127_7945323_16 COG1651 Protein-disulfide isomerase K21990 - - 0.0008596 52.0
BYD3_k127_7945323_2 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000009392 280.0
BYD3_k127_7945323_3 Cytochrome C biogenesis protein transmembrane region K06196 - - 0.00000000000000000000000000000000000000000000000000000000000000000000278 243.0
BYD3_k127_7945323_4 PFAM ABC transporter K02010 - 3.6.3.30 0.0000000000000000000000000000000000000000000000000000000000000000238 247.0
BYD3_k127_7945323_5 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 0.00000000000000000000000000000000000000000000000000000000004247 231.0
BYD3_k127_7945323_6 Glycosyl transferase, family 2 - - - 0.0000000000000000000000000000000000000000007841 177.0
BYD3_k127_7945323_7 (GMC) oxidoreductase - - - 0.0000000000000000000000000000000000002264 149.0
BYD3_k127_7945323_8 Protein-disulfide isomerase - - - 0.0000000000000000000000005272 110.0
BYD3_k127_7945323_9 L,D-transpeptidase catalytic domain - - - 0.000000000000000000000005176 119.0
BYD3_k127_7947382_0 Beta-ketoacyl synthase, C-terminal domain K09458 - 2.3.1.179 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007122 540.0
BYD3_k127_7947382_1 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000208 481.0
BYD3_k127_7947382_10 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001282 314.0
BYD3_k127_7947382_11 Purine nucleoside phosphorylase which is highly specific for 6-oxopurine nucleosides. Cleaves guanosine or inosine to respective bases and sugar-1-phosphate molecules. Involved in purine salvage K00772 - 2.4.2.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005342 292.0
BYD3_k127_7947382_12 Acyl transferase domain K00645 - 2.3.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004454 276.0
BYD3_k127_7947382_13 Short-chain dehydrogenase reductase SDR K00059 GO:0000166,GO:0003674,GO:0003824,GO:0004312,GO:0004316,GO:0005488,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0030497,GO:0032787,GO:0036094,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0046394,GO:0048037,GO:0050661,GO:0050662,GO:0055114,GO:0071704,GO:0072330,GO:0097159,GO:1901265,GO:1901363,GO:1901576 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000008048 252.0
BYD3_k127_7947382_14 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.0000000000000000000000000000000000000000000000000000000000000003704 244.0
BYD3_k127_7947382_15 response regulator - - - 0.000000000000000000000000000000000000000000001325 186.0
BYD3_k127_7947382_16 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 GO:0000166,GO:0003674,GO:0003824,GO:0004764,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019632,GO:0019752,GO:0032787,GO:0036094,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050661,GO:0050662,GO:0055114,GO:0071704,GO:0097159,GO:1901265,GO:1901363,GO:1901576,GO:1901615 1.1.1.25 0.000000000000000000000000000000000000000000002775 176.0
BYD3_k127_7947382_17 PFAM SAF domain K02279 - - 0.0000000000000000000000000000000000000000001173 173.0
BYD3_k127_7947382_18 NDK K00940 - 2.7.4.6 0.0000000000000000000000000000000000000000002624 177.0
BYD3_k127_7947382_19 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 - 3.1.26.3 0.00000000000000000000000000000000008756 144.0
BYD3_k127_7947382_2 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007598 428.0
BYD3_k127_7947382_20 PFAM Phosphoribosyltransferase - - - 0.0000000000000000000000000001194 128.0
BYD3_k127_7947382_21 Histidine kinase - - - 0.000000000000000000000000001058 130.0
BYD3_k127_7947382_22 Belongs to the SUA5 family K07566 - 2.7.7.87 0.000000000000000000000004135 119.0
BYD3_k127_7947382_23 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 GO:0000035,GO:0000036,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016053,GO:0019637,GO:0019752,GO:0019842,GO:0031177,GO:0032787,GO:0033218,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044620,GO:0046394,GO:0046467,GO:0046493,GO:0048037,GO:0051192,GO:0071704,GO:0072330,GO:0072341,GO:0090407,GO:0140104,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 - 0.00000000000000000000001147 107.0
BYD3_k127_7947382_24 Low molecular weight phosphotyrosine protein phosphatase K01104,K20201 - 3.1.3.48,3.9.1.2 0.00000000000000000002267 96.0
BYD3_k127_7947382_25 Type IV leader peptidase family K02278 - 3.4.23.43 0.000000000000000004328 91.0
BYD3_k127_7947382_26 acr, cog1399 K07040 - - 0.000000000000000009312 90.0
BYD3_k127_7947382_27 Belongs to the bacterial ribosomal protein bL32 family K02911 - - 0.000000000000003747 77.0
BYD3_k127_7947382_28 PFAM TadE family protein K02282 - - 0.0000000000533 70.0
BYD3_k127_7947382_29 Preprotein translocase SecG subunit K03075 - - 0.0000000001984 71.0
BYD3_k127_7947382_3 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009857 424.0
BYD3_k127_7947382_30 peptidyl-tyrosine sulfation - - - 0.00002059 54.0
BYD3_k127_7947382_4 phosphoglucosamine mutase activity K01835,K01840,K15778 GO:0000271,GO:0000287,GO:0003674,GO:0003824,GO:0004614,GO:0004615,GO:0005488,GO:0005975,GO:0005976,GO:0006082,GO:0006629,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0009058,GO:0009059,GO:0009103,GO:0009243,GO:0009244,GO:0009311,GO:0009312,GO:0009405,GO:0009987,GO:0016051,GO:0016053,GO:0016853,GO:0016866,GO:0016868,GO:0017144,GO:0019752,GO:0033692,GO:0034637,GO:0034645,GO:0042120,GO:0042121,GO:0043167,GO:0043169,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044281,GO:0044283,GO:0044419,GO:0046394,GO:0046401,GO:0046402,GO:0046872,GO:0051704,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 5.4.2.2,5.4.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009879 422.0
BYD3_k127_7947382_5 Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2) K11784 - 1.21.98.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002051 422.0
BYD3_k127_7947382_6 Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate K18285 - 2.5.1.120 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002539 411.0
BYD3_k127_7947382_7 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001981 385.0
BYD3_k127_7947382_8 Phosphoglycerate kinase K00927 - 2.7.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003834 357.0
BYD3_k127_7947382_9 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000045 329.0
BYD3_k127_798540_0 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase - - - 1.099e-288 926.0
BYD3_k127_798540_1 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 7.811e-194 622.0
BYD3_k127_798540_10 Putative zinc ribbon domain - - - 0.0000006117 58.0
BYD3_k127_798540_2 E1-E2 ATPase K01534 - 3.6.3.3,3.6.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002099 498.0
BYD3_k127_798540_3 Alanine dehydrogenase/PNT, N-terminal domain K00324 - 1.6.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002479 407.0
BYD3_k127_798540_4 VIT family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002203 333.0
BYD3_k127_798540_5 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction K00925 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.7.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004079 299.0
BYD3_k127_798540_6 NAD(P)+ transhydrogenase (AB-specific) activity K00324 - 1.6.1.2 0.00000000000000000000000000000000834 138.0
BYD3_k127_798540_7 Domain of unknown function DUF302 - - - 0.0000000000000000000000000004496 127.0
BYD3_k127_798540_8 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.0000000000000000000000009301 116.0
BYD3_k127_798540_9 Multicopper oxidase K00368 - 1.7.2.1 0.000000000000004927 74.0
BYD3_k127_801227_0 Phosphoenolpyruvate carboxylase K01595 - 4.1.1.31 8.13e-278 895.0
BYD3_k127_801227_1 PFAM aminotransferase class V K00830 - 2.6.1.44,2.6.1.45,2.6.1.51 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005369 581.0
BYD3_k127_801227_2 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903,K14067 - 6.2.1.5,6.2.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008917 556.0
BYD3_k127_801227_3 CoA binding domain K01902,K08692 - 6.2.1.5,6.2.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004577 452.0
BYD3_k127_801227_4 Belongs to the HpcH HpaI aldolase family K01644 - 4.1.3.34 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003387 432.0
BYD3_k127_801227_5 D-isomer specific 2-hydroxyacid dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008155 399.0
BYD3_k127_801227_6 rRNA (guanine-N2-)-methyltransferase activity - - - 0.0000000000000000000000000000000000000000002725 168.0
BYD3_k127_801227_7 protein kinase activity K12132 - 2.7.11.1 0.000000001001 72.0
BYD3_k127_8050102_0 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000001399 247.0
BYD3_k127_8050102_1 MazG nucleotide pyrophosphohydrolase domain K02428 - 3.6.1.66 0.00000000000000000000000000000000000000000000000000000000000002728 228.0
BYD3_k127_8050102_2 Ion transport protein K10716 - - 0.00000000000000000000000000000000000000000000000000000001384 207.0
BYD3_k127_8050102_4 This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis K01489 - 3.5.4.5 0.0000000000000000000000005493 121.0
BYD3_k127_8050102_5 long-chain fatty acid transport protein - - - 0.000000003593 70.0
BYD3_k127_8050102_6 COG3209 Rhs family protein - - - 0.000552 53.0
BYD3_k127_8104575_0 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005558 345.0
BYD3_k127_8104575_1 Subtilase family K13276 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000621 342.0
BYD3_k127_8104575_2 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042 - 2.3.1.157,2.7.7.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003499 301.0
BYD3_k127_8104575_3 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004806 282.0
BYD3_k127_8104575_4 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 GO:0003674,GO:0003824,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006573,GO:0006575,GO:0006732,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016874,GO:0016879,GO:0016881,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901564,GO:1901566,GO:1901576,GO:1901605 6.3.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009604 274.0
BYD3_k127_8104575_5 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.000000000000000000000000000000000000000000000000000151 211.0
BYD3_k127_8104575_6 Xylose isomerase-like TIM barrel - - - 0.00000000000000000000000000000001863 137.0
BYD3_k127_8104575_7 PFAM 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK K00950,K13940 - 2.7.6.3,4.1.2.25 0.0000000000000000000000005043 123.0
BYD3_k127_8104575_8 HD superfamily hydrolase involved in NAD metabolism - - - 0.00000000000000108 86.0
BYD3_k127_8104575_9 PFAM Cell envelope-related transcriptional attenuator - - - 0.00001399 57.0
BYD3_k127_8148245_0 Cupredoxin-like domain K00376 - 1.7.2.4 6.542e-269 847.0
BYD3_k127_8148245_1 Acyl-CoA synthetase (NDP forming) K09181 - - 1.345e-197 668.0
BYD3_k127_8148245_10 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000004984 170.0
BYD3_k127_8148245_11 Low affinity iron permease - - - 0.000000000000000000000000000000002973 148.0
BYD3_k127_8148245_12 Universal stress protein family - - - 0.00000000000000000000000000000001447 143.0
BYD3_k127_8148245_13 universal stress protein - - - 0.00000000000000000000007856 107.0
BYD3_k127_8148245_14 Domain in cystathionine beta-synthase and other proteins. - - - 0.00000000000000000002754 97.0
BYD3_k127_8148245_15 COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component K01992,K19341 - - 0.0000000000000001503 92.0
BYD3_k127_8148245_16 ErfK ybiS ycfS ynhG family protein K19234 - - 0.000000000000002193 88.0
BYD3_k127_8148245_17 Predicted membrane protein (DUF2231) - - - 0.000005409 56.0
BYD3_k127_8148245_2 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 GO:0003674,GO:0003824,GO:0004719,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0010340,GO:0016740,GO:0016741,GO:0019538,GO:0032259,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0051998,GO:0071704,GO:0140096,GO:1901564 2.1.1.77 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006911 608.0
BYD3_k127_8148245_3 Cytochrome c oxidase subunit K02274 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004519 597.0
BYD3_k127_8148245_4 Domains REC, sigma54 interaction, HTH8 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005065 436.0
BYD3_k127_8148245_5 ZIP Zinc transporter K07238 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009328 336.0
BYD3_k127_8148245_6 Domain present in carbohydrate binding proteins and sugar hydrolses K07218 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003745 281.0
BYD3_k127_8148245_7 Cytochrome c oxidase K02275 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000008253 197.0
BYD3_k127_8148245_8 lipoprotein involved in nitrous oxide reduction - - - 0.00000000000000000000000000000000000000000000000000005959 201.0
BYD3_k127_8148245_9 AAA domain, putative AbiEii toxin, Type IV TA system K01990,K19340 - - 0.0000000000000000000000000000000000000000000002342 192.0
BYD3_k127_8322581_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 6e-296 941.0
BYD3_k127_8322581_1 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 GO:0003674,GO:0003824,GO:0004019,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0015949,GO:0016874,GO:0016879,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033554,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046033,GO:0046040,GO:0046085,GO:0046086,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0050896,GO:0051716,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002911 463.0
BYD3_k127_8322581_2 Amidohydrolase family K01487 GO:0003674,GO:0003824,GO:0005488,GO:0006139,GO:0006144,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0008892,GO:0009112,GO:0009987,GO:0016787,GO:0016810,GO:0016813,GO:0016814,GO:0018756,GO:0019239,GO:0034641,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044281,GO:0046098,GO:0046483,GO:0046872,GO:0046914,GO:0055086,GO:0071704,GO:0072521,GO:1901360,GO:1901564 3.5.4.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004648 294.0
BYD3_k127_8322581_3 NIF3 (NGG1p interacting factor 3) - - - 0.000000000000000000000000000000000000000000000000001398 197.0
BYD3_k127_8322581_4 RNA polymerase sigma factor K03088 GO:0000988,GO:0000990,GO:0003674,GO:0005575,GO:0005618,GO:0005623,GO:0006355,GO:0006950,GO:0006979,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010468,GO:0010556,GO:0016987,GO:0019219,GO:0019222,GO:0030312,GO:0031323,GO:0031326,GO:0033554,GO:0034605,GO:0043254,GO:0044087,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051171,GO:0051252,GO:0051409,GO:0051716,GO:0060255,GO:0065007,GO:0071944,GO:0080090,GO:0140110,GO:1903506,GO:2000112,GO:2000142,GO:2001141 - 0.0000000000000000000000000000000000000001533 158.0
BYD3_k127_8322581_5 Periplasmic component of the Tol biopolymer transport system - - - 0.00000000000000000003391 103.0
BYD3_k127_8322581_6 Protein of unknown function (DUF456) K09793 - - 0.000000000000000004559 90.0
BYD3_k127_8322581_7 domain, Protein K01179,K07260,K13735 - 3.2.1.4,3.4.17.14 0.00001055 60.0
BYD3_k127_8372762_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 1.1e-230 726.0
BYD3_k127_8372762_1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001695 599.0
BYD3_k127_8372762_10 Belongs to the ABC transporter superfamily K02010 - 3.6.3.30 0.000000000000000000000000000000000000000000000000000000000000000000000000003734 274.0
BYD3_k127_8372762_11 beta-lactamase domain protein - - - 0.00000000000000000000000000000000000000000000000002212 203.0
BYD3_k127_8372762_12 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.0000000000000000000000000000000000000002945 171.0
BYD3_k127_8372762_13 Transcriptional regulator - - - 0.0000000000000000000000000000000121 133.0
BYD3_k127_8372762_14 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.000000000002077 80.0
BYD3_k127_8372762_2 ATPase activity K02045 - 3.6.3.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007902 469.0
BYD3_k127_8372762_3 Sulfate ABC transporter periplasmic sulfate-binding protein K02048 GO:0005575,GO:0005623,GO:0042597,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004201 413.0
BYD3_k127_8372762_4 4Fe-4S double cluster binding domain K18979 - 1.17.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000369 328.0
BYD3_k127_8372762_5 sulfate ABC transporter K02047 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001139 295.0
BYD3_k127_8372762_6 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002357 282.0
BYD3_k127_8372762_7 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001176 293.0
BYD3_k127_8372762_8 TIGRFAM sulfate ABC transporter K02046 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001491 284.0
BYD3_k127_8372762_9 Phage integrase, N-terminal SAM-like domain K03733,K04763 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004105 267.0
BYD3_k127_8411739_0 Glucose / Sorbosone dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000415 486.0
BYD3_k127_8411739_1 Putative outer membrane beta-barrel porin, MtrB/PioB - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003126 378.0
BYD3_k127_8411739_10 DHH family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005178 274.0
BYD3_k127_8411739_11 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000001105 244.0
BYD3_k127_8411739_12 MFS_1 like family K08151,K08153 - - 0.0000000000000000000000000000000000000000000000000000000002322 219.0
BYD3_k127_8411739_13 Rieske [2Fe-2S] domain K02636,K03886 - 1.10.9.1 0.000000000000000000000000000008576 126.0
BYD3_k127_8411739_14 Belongs to the 5-formyltetrahydrofolate cyclo-ligase family K01934 - 6.3.3.2 0.00000000000000000000000002268 126.0
BYD3_k127_8411739_17 COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain - - - 0.0003925 52.0
BYD3_k127_8411739_18 PFAM Cytochrome C - - - 0.0005704 48.0
BYD3_k127_8411739_2 NfeD-like C-terminal, partner-binding K07403 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005409 362.0
BYD3_k127_8411739_3 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005478 331.0
BYD3_k127_8411739_4 Doubled CXXCH motif (Paired_CXXCH_1) K08354 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000446 315.0
BYD3_k127_8411739_5 Cytochrome b/b6/petB K00412,K03888 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001386 312.0
BYD3_k127_8411739_6 DNA modification repair radical SAM protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007804 297.0
BYD3_k127_8411739_7 D-Ala-D-Ala carboxypeptidase 3 (S13) family K07259 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000926 302.0
BYD3_k127_8411739_8 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.000000000000000000000000000000000000000000000000000000000000000000000000000001527 278.0
BYD3_k127_8411739_9 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 GO:0003674,GO:0003824,GO:0004418,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000001528 264.0
BYD3_k127_8560187_0 Fumarase C C-terminus K01679 - 4.2.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001374 559.0
BYD3_k127_8560187_1 Pyridine nucleotide-disulphide oxidoreductase dimerisation region K00382 - 1.8.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001556 464.0
BYD3_k127_8560187_10 e3 binding domain K00658 - 2.3.1.61 0.000000000000000000000000512 110.0
BYD3_k127_8560187_11 - - - - 0.000000000000001715 83.0
BYD3_k127_8560187_12 TIGRFAM TonB family protein K03832 - - 0.000001245 57.0
BYD3_k127_8560187_2 PFAM Transketolase central region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004829 403.0
BYD3_k127_8560187_3 Transketolase, pyrimidine binding domain K00162 - 1.2.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002998 399.0
BYD3_k127_8560187_4 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00161,K21416 - 1.2.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003883 367.0
BYD3_k127_8560187_5 2-oxoacid dehydrogenases acyltransferase (catalytic domain) K00162,K00627 - 1.2.4.1,2.3.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001032 299.0
BYD3_k127_8560187_6 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor K00161,K11381,K21416 - 1.2.4.1,1.2.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006541 281.0
BYD3_k127_8560187_7 protein kinase activity K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000004223 253.0
BYD3_k127_8560187_8 KR domain K03793 - 1.5.1.33 0.000000000000000000000000000000000000000000000000000000009924 208.0
BYD3_k127_8560187_9 PFAM Adenylate and Guanylate cyclase catalytic domain - - - 0.0000000000000000000000000000000000000000000569 184.0
BYD3_k127_8583191_0 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily K01465 - 3.5.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007432 475.0
BYD3_k127_8583191_1 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain K00609 - 2.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004483 452.0
BYD3_k127_8583191_10 AAA domain - - - 0.00000000000000192 88.0
BYD3_k127_8583191_2 nucleic acid binding OB-fold tRNA helicase-type K03698 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001865 265.0
BYD3_k127_8583191_3 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.000000000000000000000000000000000000000000000000000000000000000006658 229.0
BYD3_k127_8583191_4 Belongs to the purine pyrimidine phosphoribosyltransferase family. PyrR subfamily K02825 - 2.4.2.9 0.00000000000000000000000000000000000000000000000000000000000000003958 229.0
BYD3_k127_8583191_5 dTDP biosynthetic process K00943 GO:0003674,GO:0003824,GO:0004798,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009165,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.4.9 0.00000000000000000000000000000000000000000000004088 177.0
BYD3_k127_8583191_6 MgtC family K07507 - - 0.0000000000000000000000000000000008689 136.0
BYD3_k127_8583191_7 conserved protein, contains double-stranded beta-helix domain - - - 0.00000000000000000000000000000001521 140.0
BYD3_k127_8583191_8 - - - - 0.000000000000000000000000000002803 126.0
BYD3_k127_8583191_9 PFAM Cupin 2 conserved barrel domain protein - - - 0.000000000000000000000000001128 125.0
BYD3_k127_8583784_0 Fungalysin metallopeptidase (M36) - - - 1.974e-298 954.0
BYD3_k127_8583784_1 Protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003691 527.0
BYD3_k127_8583784_2 two component, sigma54 specific, transcriptional regulator, Fis family K02481,K07713 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001653 353.0
BYD3_k127_8583784_3 Fatty acid desaturase K00507 - 1.14.19.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002155 307.0
BYD3_k127_8583784_4 PHP domain protein K02347 - - 0.000000000000000000000000000000000000000000000002973 188.0
BYD3_k127_8583784_5 Tetratricopeptide repeat - - - 0.000000000002101 80.0
BYD3_k127_8583784_6 Tail fiber protein - - - 0.000000000002257 75.0
BYD3_k127_8599692_0 PFAM sulfatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002816 442.0
BYD3_k127_8599692_1 Arginosuccinate synthase K01940 - 6.3.4.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000219 412.0
BYD3_k127_8599692_2 Alpha beta hydrolase K00433 - 1.11.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000004929 276.0
BYD3_k127_8599692_3 Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring K00857,K01920,K01935 GO:0003674,GO:0003824,GO:0004141,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0016882,GO:0017144,GO:0018130,GO:0019752,GO:0032787,GO:0034641,GO:0042364,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.1.21,6.3.2.3,6.3.3.3 0.000000000000000000000000000000000000000000000000000000000000000006511 235.0
BYD3_k127_861344_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 GO:0000166,GO:0003674,GO:0003824,GO:0004175,GO:0004176,GO:0004222,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006508,GO:0006807,GO:0006950,GO:0006979,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0008270,GO:0009056,GO:0009057,GO:0010468,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019222,GO:0019538,GO:0030145,GO:0030163,GO:0030554,GO:0031224,GO:0031226,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0035639,GO:0036094,GO:0040007,GO:0042623,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043273,GO:0044238,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0046872,GO:0046914,GO:0050789,GO:0050896,GO:0060255,GO:0065007,GO:0070011,GO:0071704,GO:0071944,GO:0097159,GO:0097367,GO:0098796,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575 - 6.45e-251 796.0
BYD3_k127_861344_1 adenylyl cyclase class-3 4 guanylyl cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001677 326.0
BYD3_k127_861344_2 Protein of unknown function (DUF2723) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002548 293.0
BYD3_k127_861344_3 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 - 2.5.1.15 0.0000000000000000000000000000000000000000000000000000000000000000003502 262.0
BYD3_k127_861344_4 Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria K18672 - 2.7.7.85 0.000000000000000000000000000000000000000000000000000001665 216.0
BYD3_k127_861344_5 Belongs to the purine pyrimidine phosphoribosyltransferase family K00760 - 2.4.2.8 0.00000000000000000000000000000000000000001578 171.0
BYD3_k127_861344_6 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.000000000000000000000000002004 129.0
BYD3_k127_8682212_0 AMP-binding enzyme C-terminal domain K04110 - 6.2.1.25 4.407e-205 659.0
BYD3_k127_8682212_1 Creatinine amidohydrolase K01470 - 3.5.2.10 0.000000000000000000000000000000000000001564 151.0
BYD3_k127_8682212_2 light absorption - - - 0.00000000000000000000000000000000000708 144.0
BYD3_k127_8682212_3 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity - - - 0.0000000000000000000000000000004129 128.0
BYD3_k127_868252_0 Berberine and berberine like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004826 589.0
BYD3_k127_868252_1 nerve growth factor signaling pathway K08062,K21486 GO:0003674,GO:0003676,GO:0003677,GO:0003700,GO:0003712,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0006355,GO:0006357,GO:0007154,GO:0007165,GO:0007264,GO:0007265,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016020,GO:0019219,GO:0019222,GO:0019899,GO:0019900,GO:0019901,GO:0023052,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031625,GO:0031974,GO:0031981,GO:0032991,GO:0035556,GO:0042826,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043254,GO:0044087,GO:0044389,GO:0044421,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0045171,GO:0045893,GO:0045935,GO:0045944,GO:0048518,GO:0048522,GO:0050750,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0051716,GO:0060255,GO:0065007,GO:0070013,GO:0070325,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141 - 0.0000000000000000000000000000000000000000006736 177.0
BYD3_k127_868252_2 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000000000000000000000006025 168.0
BYD3_k127_868252_3 Ankyrin repeats (many copies) K10380,K15503 GO:0002262,GO:0002376,GO:0002520,GO:0003674,GO:0005198,GO:0005200,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005783,GO:0005829,GO:0005856,GO:0005886,GO:0005938,GO:0006725,GO:0006778,GO:0006779,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006887,GO:0006888,GO:0006996,GO:0007010,GO:0007163,GO:0007275,GO:0008092,GO:0008093,GO:0008104,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0010638,GO:0012505,GO:0014731,GO:0015672,GO:0016020,GO:0016043,GO:0016192,GO:0016323,GO:0016528,GO:0016529,GO:0018130,GO:0019438,GO:0019899,GO:0030011,GO:0030016,GO:0030017,GO:0030018,GO:0030097,GO:0030099,GO:0030154,GO:0030218,GO:0030424,GO:0030507,GO:0030673,GO:0030674,GO:0030863,GO:0031252,GO:0031253,GO:0031256,GO:0031430,GO:0031672,GO:0031674,GO:0032501,GO:0032502,GO:0032589,GO:0032940,GO:0033013,GO:0033014,GO:0033036,GO:0033043,GO:0033267,GO:0034101,GO:0034613,GO:0034641,GO:0035088,GO:0035090,GO:0042383,GO:0042592,GO:0042995,GO:0043005,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043292,GO:0044237,GO:0044249,GO:0044271,GO:0044304,GO:0044422,GO:0044424,GO:0044425,GO:0044444,GO:0044448,GO:0044449,GO:0044456,GO:0044459,GO:0044463,GO:0044464,GO:0045197,GO:0045199,GO:0045202,GO:0045211,GO:0046483,GO:0046903,GO:0046907,GO:0048193,GO:0048468,GO:0048513,GO:0048518,GO:0048522,GO:0048534,GO:0048731,GO:0048821,GO:0048856,GO:0048869,GO:0048872,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0051117,GO:0051128,GO:0051130,GO:0051179,GO:0051186,GO:0051188,GO:0051234,GO:0051641,GO:0051649,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0060090,GO:0061245,GO:0061515,GO:0065007,GO:0065008,GO:0070727,GO:0071704,GO:0071840,GO:0071944,GO:0072657,GO:0072659,GO:0097060,GO:0097458,GO:0098590,GO:0098771,GO:0098794,GO:0099080,GO:0099081,GO:0099512,GO:0099568,GO:0120025,GO:0120038,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1990778 - 0.00000000000000000000000000000001831 145.0
BYD3_k127_868252_4 Belongs to the sigma-70 factor family. ECF subfamily - - - 0.000000000000000009447 92.0
BYD3_k127_868252_5 AntiSigma factor - - - 0.0008917 49.0
BYD3_k127_86837_0 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001049 520.0
BYD3_k127_86837_1 Zinc dependent phospholipase C - - - 0.000000000000000000000000000000000000000000000000000000000000000008906 238.0
BYD3_k127_86837_2 STAS-like domain of unknown function (DUF4325) - - - 0.00003763 56.0
BYD3_k127_8769591_0 - - GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008757,GO:0016278,GO:0016740,GO:0016741,GO:0032259 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006537 388.0
BYD3_k127_8769591_1 Permease YjgP YjgQ family protein K07091,K11720 GO:0003674,GO:0003824,GO:0005215,GO:0005319,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006869,GO:0008150,GO:0010876,GO:0015221,GO:0015399,GO:0015405,GO:0015437,GO:0015920,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0031224,GO:0032991,GO:0033036,GO:0034040,GO:0042623,GO:0042626,GO:0043190,GO:0043492,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944,GO:0098533,GO:0098796,GO:0098797,GO:1901264,GO:1901505,GO:1902494,GO:1902495,GO:1904949,GO:1990351 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005417 281.0
BYD3_k127_8769591_2 Putative cyclase K07130 - 3.5.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000001339 267.0
BYD3_k127_8769591_3 Peptidase M28 - - - 0.00000000000000000000000000000000000000000000000000000000000000001341 246.0
BYD3_k127_8769591_4 Predicted permease YjgP/YjgQ family K11720 - - 0.0000000000000000000000000000000000000002068 174.0
BYD3_k127_8793641_0 Insulinase (Peptidase family M16) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001083 420.0
BYD3_k127_8793641_1 Peptidase M16 inactive domain K07263 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001195 342.0
BYD3_k127_8793641_2 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 GO:0003674,GO:0003824,GO:0003887,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0033554,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:0140097,GO:1901360,GO:1901362,GO:1901576 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000001921 246.0
BYD3_k127_8793641_3 metallopeptidase activity - - - 0.00000000000000000000000000000000000000000000000000000000000172 219.0
BYD3_k127_8793641_4 Peptidase m28 - - - 0.0000000000000000000000000000000000000000000000000000000001113 224.0
BYD3_k127_8793641_5 metallopeptidase activity - - - 0.000000000000000000000000000000000000000001786 179.0
BYD3_k127_8793641_6 Cupredoxin-like domain - - - 0.000000003342 70.0
BYD3_k127_8828199_0 CarboxypepD_reg-like domain - - - 3.057e-261 839.0
BYD3_k127_8828199_1 Peptidase family M28 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001215 617.0
BYD3_k127_8828199_10 PFAM GGDEF domain containing protein - - - 0.000000000000000000000000000000005078 141.0
BYD3_k127_8828199_11 membrane - - - 0.0000000000000005806 92.0
BYD3_k127_8828199_12 Protein of unknown function (DUF421) - - - 0.00000002362 63.0
BYD3_k127_8828199_2 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004221 426.0
BYD3_k127_8828199_3 SusD family K21572 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000541 379.0
BYD3_k127_8828199_4 DNA ligase K01971 - 6.5.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001701 282.0
BYD3_k127_8828199_5 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001711 277.0
BYD3_k127_8828199_6 dna ligase K01971 - 6.5.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000002658 248.0
BYD3_k127_8828199_7 glutamine amidotransferase K01658 - 4.1.3.27 0.0000000000000000000000000000000000000000000000000000000000000001671 246.0
BYD3_k127_8828199_8 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.00000000000000000000000000000000000000000000225 177.0
BYD3_k127_8828199_9 helix_turn_helix, arabinose operon control protein - - - 0.00000000000000000000000000000000000000003706 165.0
BYD3_k127_884318_0 Amidohydrolase family K01468 - 3.5.2.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001303 330.0
BYD3_k127_884318_1 Peptidylprolyl isomerase K01802,K03769,K03770 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000176 302.0
BYD3_k127_884318_2 Polyprenyl synthetase K02523 - 2.5.1.90 0.0000000000000000000000000000000000000000000000000000000000000000000001355 263.0
BYD3_k127_884318_3 DNA polymerase alpha chain like domain K07053,K20859 - 3.1.3.97,3.1.4.57 0.000000000000000000000000000000000000000000000000000000004179 229.0
BYD3_k127_884318_4 PFAM Rhodanese domain protein K01011 GO:0005575,GO:0005623,GO:0042597,GO:0044464 2.8.1.1,2.8.1.2 0.0000000000000000000000000000000000000000000000006176 185.0
BYD3_k127_884318_5 Tetratricopeptide repeat - - - 0.0000000000000000005347 102.0
BYD3_k127_884318_6 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.0000000000001879 75.0
BYD3_k127_884318_7 Tetratricopeptide repeats - - - 0.000000000005445 79.0
BYD3_k127_884318_8 Domain of unknown function (DUF4321) - - - 0.0000003893 63.0
BYD3_k127_9022589_0 Mur ligase middle domain protein K01929 - 6.3.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000004209 273.0
BYD3_k127_9022589_1 Mur ligase middle domain protein K01929 - 6.3.2.10 0.000000000000000000000000000000000000000000000000005869 206.0
BYD3_k127_9022589_2 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.000000000000000000000000000000000002389 146.0
BYD3_k127_9022589_3 ATP-grasp enzyme - - - 0.000000000000002904 88.0
BYD3_k127_9022589_4 Protein of unknown function, DUF393 - - - 0.00001852 57.0
BYD3_k127_9079234_0 Magnesium chelatase, subunit ChlI C-terminal K07391 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005974 474.0
BYD3_k127_9079234_1 NeuB family K03856 - 2.5.1.54 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006413 430.0
BYD3_k127_9079234_10 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.00000000000000000000000000000000005883 152.0
BYD3_k127_9079234_11 Forkhead associated domain - - - 0.00000000000000000000000000000000009881 148.0
BYD3_k127_9079234_12 PFAM cytochrome c biogenesis protein, transmembrane region K06196 - - 0.00000000000000000000000000000001631 138.0
BYD3_k127_9079234_13 Sortase family K07284 - 3.4.22.70 0.0000000000000000000000000001065 124.0
BYD3_k127_9079234_14 Belongs to the UPF0102 family K07460 - - 0.0000000000000000000007092 100.0
BYD3_k127_9079234_15 Protein of unknown function DUF72 - - - 0.0000000000000001237 85.0
BYD3_k127_9079234_16 Thioredoxin - - - 0.000000000000008969 81.0
BYD3_k127_9079234_17 CarD-like/TRCF domain K07736 - - 0.0000000000003103 79.0
BYD3_k127_9079234_18 Putative zinc-finger - - - 0.00000000001117 77.0
BYD3_k127_9079234_2 dUTPase K01494 - 3.5.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001092 306.0
BYD3_k127_9079234_20 Cytokinin riboside 5'-monophosphate phosphoribohydrolase K06966 GO:0003674,GO:0003824,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009308,GO:0009690,GO:0009691,GO:0009987,GO:0010817,GO:0016787,GO:0016798,GO:0016799,GO:0034754,GO:0042445,GO:0042446,GO:0044237,GO:0044249,GO:0046483,GO:0065007,GO:0065008,GO:0071704,GO:1901564 3.2.2.10 0.00000003391 64.0
BYD3_k127_9079234_21 Phosphatidate cytidylyltransferase K16368 GO:0003674,GO:0003824,GO:0004143,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0006629,GO:0006644,GO:0006650,GO:0006654,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009987,GO:0012505,GO:0016020,GO:0016021,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019637,GO:0030176,GO:0031224,GO:0031227,GO:0031984,GO:0042175,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045017,GO:0046473,GO:0046474,GO:0046486,GO:0071704,GO:0090407,GO:0098827,GO:1901576 2.7.1.174 0.0000001132 65.0
BYD3_k127_9079234_22 Belongs to the bacterial ribosomal protein bS21 family K02970 - - 0.0000524 55.0
BYD3_k127_9079234_3 PFAM ExsB family protein K06864 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000007293 257.0
BYD3_k127_9079234_4 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000286 256.0
BYD3_k127_9079234_5 protein kinase activity K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000298 226.0
BYD3_k127_9079234_6 PFAM Adenylate and Guanylate cyclase catalytic domain - - - 0.000000000000000000000000000000000000000000000000000001688 218.0
BYD3_k127_9079234_7 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.0000000000000000000000000000000000000000000001563 186.0
BYD3_k127_9079234_8 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.000000000000000000000000000000000000000000004123 174.0
BYD3_k127_9079234_9 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000007869 171.0
BYD3_k127_9085097_0 acetyltransferase K03806 - 3.5.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005563 348.0
BYD3_k127_9085097_1 PFAM ABC transporter K09691 - - 0.00000000000000000000000000000000000000000000000000000000000008739 241.0
BYD3_k127_9085097_10 TIGRFAM methyltransferase FkbM family - - - 0.0000000005682 70.0
BYD3_k127_9085097_11 Glycosyltransferase like family 2 K00721 - 2.4.1.83 0.000000001129 72.0
BYD3_k127_9085097_2 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000004211 225.0
BYD3_k127_9085097_3 PFAM ABC-2 type transporter K09690 - - 0.000000000000000000000000000000000000000001878 179.0
BYD3_k127_9085097_4 Methionine biosynthesis protein MetW K18827 - 2.1.1.294,2.7.1.181 0.000000000000000000000000000000000000399 158.0
BYD3_k127_9085097_5 PFAM Methyltransferase type 11 K15257 - - 0.0000000000000000000000000000000000004767 162.0
BYD3_k127_9085097_6 Methyltransferase - - - 0.0000000000000000000000000000000002367 143.0
BYD3_k127_9085097_7 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000008309 148.0
BYD3_k127_9085097_8 SWIB/MDM2 domain - - - 0.00000000000000000000000000008884 120.0
BYD3_k127_9085097_9 Glycosyl transferase family group 2 K07011 - - 0.0000000000000000000000000002311 132.0
BYD3_k127_920540_0 Histidine ammonia-lyase K01745 - 4.3.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003431 502.0
BYD3_k127_920540_1 Amidohydrolase family K05603 - 3.5.3.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007523 363.0
BYD3_k127_920540_2 involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744,K09774 - - 0.00000000000000000000000000000000000000000000000007161 204.0
BYD3_k127_920540_3 TIGRFAM Diguanylate cyclase - - - 0.0000000000000000000000000007256 129.0
BYD3_k127_920540_4 - - - - 0.00000000001825 74.0
BYD3_k127_920540_5 COG1404 Subtilisin-like serine proteases K13276 - - 0.00000001673 67.0
BYD3_k127_934288_0 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001592 469.0
BYD3_k127_934288_1 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 - 1.17.7.1,1.17.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004183 425.0
BYD3_k127_934288_2 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002429 403.0
BYD3_k127_934288_3 beta-keto acid cleavage enzyme K18013 - 2.3.1.247 0.00000000000000000000000000000000000000000000000000000000000000006878 239.0
BYD3_k127_934288_4 Homoserine dehydrogenase, NAD binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000002239 248.0
BYD3_k127_934288_5 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 - 2.1.1.297 0.0000000000000000000000000000000000000000000008806 187.0
BYD3_k127_934288_6 Binds the 23S rRNA K02909 - - 0.0000000000000000000000001923 107.0
BYD3_k127_934288_7 Thioesterase superfamily K07107 - - 0.0000000000000000004686 98.0
BYD3_k127_934288_8 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.0000000000003103 76.0
BYD3_k127_934288_9 Catalyzes the transfer of acetyl from acetyl-CoA to desacetylmycothiol (Cys-GlcN-Ins) to form mycothiol K15520 GO:0000302,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006790,GO:0006950,GO:0006979,GO:0008080,GO:0008150,GO:0008152,GO:0009058,GO:0009268,GO:0009628,GO:0009636,GO:0009987,GO:0010035,GO:0010125,GO:0010126,GO:0010447,GO:0016137,GO:0016138,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0033554,GO:0034599,GO:0034614,GO:0035447,GO:0035690,GO:0040007,GO:0042221,GO:0042493,GO:0042542,GO:0044110,GO:0044116,GO:0044117,GO:0044119,GO:0044237,GO:0044249,GO:0044272,GO:0044403,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0046677,GO:0050896,GO:0051186,GO:0051188,GO:0051704,GO:0051716,GO:0070301,GO:0070887,GO:0071214,GO:0071236,GO:0071467,GO:0071468,GO:0071704,GO:0097237,GO:0104004,GO:1901135,GO:1901137,GO:1901576,GO:1901657,GO:1901659,GO:1901700,GO:1901701 2.3.1.189 0.0005139 52.0
BYD3_k127_943498_0 COG0577 ABC-type antimicrobial peptide transport system permease component - - - 9.444e-229 734.0
BYD3_k127_943498_1 TIGRFAM ATP-dependent DNA helicase, RecQ K03654 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000177 621.0
BYD3_k127_943498_10 Cytochrome P460 - - - 0.00000000000000000004269 101.0
BYD3_k127_943498_11 - - - - 0.0000000000005965 79.0
BYD3_k127_943498_2 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003292 535.0
BYD3_k127_943498_3 efflux transmembrane transporter activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001042 504.0
BYD3_k127_943498_4 Biotin-lipoyl like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001336 475.0
BYD3_k127_943498_5 Acetamidase/Formamidase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001175 438.0
BYD3_k127_943498_6 Enoyl-(Acyl carrier protein) reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003246 438.0
BYD3_k127_943498_7 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000663 365.0
BYD3_k127_943498_8 AAA domain, putative AbiEii toxin, Type IV TA system - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005436 346.0
BYD3_k127_943498_9 Predicted membrane protein (DUF2079) K07778 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002056 325.0