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Overview

ID MAG00145
Name BYD3_bin.8
Sample SMP0003
Taxonomy
Kingdom Bacteria
Phylum Acidobacteriota
Class Vicinamibacteria
Order Vicinamibacterales
Family UBA2999
Genus Gp6-AA40
Species Gp6-AA40 sp035711805
Assembly information
Completeness (%) 77.99
Contamination (%) 1.65
GC content (%) 66.0
N50 (bp) 23,818
Genome size (bp) 5,168,307

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes4275

Gene name Description KEGG GOs EC E-value Score Sequence
BYD3_k127_1013137_0 Phosphomethylpyrimidine kinase K03272 - 2.7.1.167,2.7.7.70 0.0000000000000000000000000000000000000000000000000000000000000000009724 239.0
BYD3_k127_1013137_1 Glycosyl transferase, family 9 K02843,K02849 - - 0.00000000000000000000000000000000000000000004763 177.0
BYD3_k127_1013137_2 O-Antigen ligase K18814 - - 0.00000000000000000000000000000000000000002509 168.0
BYD3_k127_1013137_3 Trm112p-like protein K00912,K09791 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 2.7.1.130 0.00000000000000001024 83.0
BYD3_k127_104669_0 TonB dependent receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000177 620.0
BYD3_k127_104669_1 Sugar (and other) transporter K08195 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000114 455.0
BYD3_k127_104669_2 major facilitator superfamily MFS_1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002169 370.0
BYD3_k127_104669_3 TIGRFAM GTP cyclohydrolase I K01495 - 3.5.4.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000943 267.0
BYD3_k127_104669_4 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710 - 4.2.1.46 0.00000000000000000000000000000000000000000000000000000000000000000002571 241.0
BYD3_k127_104669_5 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.0000000000000000000000000000000000000000001797 169.0
BYD3_k127_1058366_0 ASPIC and UnbV - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001557 587.0
BYD3_k127_1058366_1 TonB-dependent receptor - - - 0.0000000000000000000000000000000000000000002142 182.0
BYD3_k127_1058366_2 Sigma-70, region 4 K03088 - - 0.00000000000000000000000000000000000003105 151.0
BYD3_k127_1058366_3 COG0457 FOG TPR repeat - - - 0.00000000000000000000009642 113.0
BYD3_k127_1058366_4 Anti-sigma-K factor rskA - - - 0.000000000000000007134 94.0
BYD3_k127_1058366_5 Domain of unknown function (DUF4331) - - - 0.0000000000023 71.0
BYD3_k127_1062752_0 penicillin-binding protein, 1A family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007399 421.0
BYD3_k127_1062752_1 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001086 323.0
BYD3_k127_1062752_10 D,D-heptose 1,7-bisphosphate phosphatase K03273 - 3.1.3.82,3.1.3.83 0.0000000000000000000000000000000000000000000472 167.0
BYD3_k127_1062752_11 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) - - - 0.00000000000000000000000000000000000000000007945 167.0
BYD3_k127_1062752_12 Belongs to the 'phage' integrase family - - - 0.000000000000000000000000000000000000000009398 160.0
BYD3_k127_1062752_13 Phospholipid methyltransferase - - - 0.0000000000000000000007986 102.0
BYD3_k127_1062752_14 - - - - 0.0000000000006757 80.0
BYD3_k127_1062752_15 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.000000000006911 67.0
BYD3_k127_1062752_17 - - - - 0.0000001547 53.0
BYD3_k127_1062752_18 - - - - 0.00005876 49.0
BYD3_k127_1062752_2 Bifunctional protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000008969 266.0
BYD3_k127_1062752_3 Belongs to the glutathione peroxidase family K00432 - 1.11.1.9 0.000000000000000000000000000000000000000000000000000000008239 203.0
BYD3_k127_1062752_4 D,D-heptose 1,7-bisphosphate phosphatase K02841,K02843,K02849,K03271,K03272,K03273 - 2.7.1.167,2.7.7.70,3.1.3.82,3.1.3.83,5.3.1.28 0.000000000000000000000000000000000000000000000000000001636 207.0
BYD3_k127_1062752_5 Transcriptional regulator K13652 - - 0.0000000000000000000000000000000000000000000000000005805 199.0
BYD3_k127_1062752_6 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose - - - 0.000000000000000000000000000000000000000000000000002785 186.0
BYD3_k127_1062752_7 Lipid A biosynthesis K02517 - 2.3.1.241 0.000000000000000000000000000000000000000000000000003216 198.0
BYD3_k127_1062752_8 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.0000000000000000000000000000000000000000000000003084 192.0
BYD3_k127_1062752_9 Glycosyltransferase family 9 (heptosyltransferase) K02841,K02843 - - 0.000000000000000000000000000000000000000000007124 181.0
BYD3_k127_1071348_0 long-chain fatty acid transporting porin activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002491 359.0
BYD3_k127_1071348_1 cytochrome - - - 0.000005302 58.0
BYD3_k127_1092111_0 Bacterial regulatory protein, Fis family K07713 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000662 271.0
BYD3_k127_1092111_1 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003589 264.0
BYD3_k127_1092111_2 heat shock protein DnaJ K05516 - - 0.00000000000000000000000000000000002011 144.0
BYD3_k127_1092111_3 PFAM Polysaccharide export protein K01991 - - 0.00000000000000000000000000000000003569 141.0
BYD3_k127_1092111_4 PFAM von Willebrand factor type A - - - 0.000000000000000000003566 109.0
BYD3_k127_1092111_5 von Willebrand factor, type A K12511 - - 0.0000000000000000009462 101.0
BYD3_k127_1092111_6 diguanylate cyclase - - - 0.000000461 63.0
BYD3_k127_1092111_7 repeat-containing protein - - - 0.0002119 54.0
BYD3_k127_1092111_8 ATPases associated with a variety of cellular activities - - - 0.0007204 44.0
BYD3_k127_1131384_0 peptidyl-tyrosine sulfation K01277 - 3.4.14.4 4.99e-268 840.0
BYD3_k127_1131384_1 Putative glutamine amidotransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005341 604.0
BYD3_k127_1131384_2 ATPase family associated with various cellular activities (AAA) K03924 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004438 436.0
BYD3_k127_1131384_3 Protein of unknown function DUF58 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000186 295.0
BYD3_k127_1131384_4 phosphatase homologous to the C-terminal domain of histone macroH2A1 - - - 0.000000000000000000000000000000000000000000000000000000557 196.0
BYD3_k127_1131384_5 nuclear chromosome segregation - - - 0.000000000000000000000000000000000000000000000000000006394 205.0
BYD3_k127_1131384_6 Aerotolerance regulator N-terminal - - - 0.00000000000000000000000000000000000000006046 173.0
BYD3_k127_1131384_7 Peptidase C14 caspase catalytic subunit p20 - - - 0.00000000000000000000000000000000000000006301 163.0
BYD3_k127_1131384_8 transferase activity, transferring acyl groups other than amino-acyl groups K03466 - - 0.000000000000000000000000000000000000001849 162.0
BYD3_k127_1131384_9 YCII-related domain K09780 - - 0.0000000000000000000000000000000000004863 142.0
BYD3_k127_11348_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 0.0 1041.0
BYD3_k127_11348_1 GTP-binding protein TypA K06207 - - 1.931e-270 846.0
BYD3_k127_11348_10 TRAP transporter T-component - - - 0.0000000000000000000000000000000000000000000000000000000000004819 224.0
BYD3_k127_11348_11 Bacterial extracellular solute-binding protein, family 7 - - - 0.000000000000000000000000000000000000000000000000000000000007923 219.0
BYD3_k127_11348_12 HD domain K07814 - - 0.00000000000000000000000000000000000000000000000000000000009152 228.0
BYD3_k127_11348_13 TonB-dependent receptor - - - 0.000000000000000000000000000000000000000000000000000000001708 226.0
BYD3_k127_11348_14 ubiE/COQ5 methyltransferase family - - - 0.00000000000000000000000000000000000000000000000000001746 197.0
BYD3_k127_11348_15 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000000000000000009488 188.0
BYD3_k127_11348_16 Ferredoxin K04755 - - 0.00000000000000000000000000000000000000000000000223 178.0
BYD3_k127_11348_17 lipoprotein biosynthetic process K13292 - - 0.0000000000000000000000000000000000000000000734 169.0
BYD3_k127_11348_18 Cytochrome c K03611 - - 0.000000000000000000000000000000000000000000334 164.0
BYD3_k127_11348_19 Hydrolase of the alpha beta-hydrolase K07020 - - 0.00000000000000000000000000000000000000001775 160.0
BYD3_k127_11348_2 Peptidase M16 K07263 - - 7.267e-200 656.0
BYD3_k127_11348_20 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03768 - 5.2.1.8 0.00000000000000000000000000000000000001043 159.0
BYD3_k127_11348_21 dUTP diphosphatase activity K01520,K13038 GO:0000287,GO:0003674,GO:0003824,GO:0004170,GO:0005488,GO:0006139,GO:0006220,GO:0006221,GO:0006226,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009141,GO:0009143,GO:0009147,GO:0009149,GO:0009157,GO:0009162,GO:0009165,GO:0009166,GO:0009176,GO:0009177,GO:0009200,GO:0009204,GO:0009211,GO:0009213,GO:0009219,GO:0009221,GO:0009223,GO:0009262,GO:0009263,GO:0009264,GO:0009265,GO:0009394,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0022607,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0043167,GO:0043169,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046078,GO:0046080,GO:0046081,GO:0046385,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0046872,GO:0047429,GO:0051259,GO:0051260,GO:0055086,GO:0065003,GO:0070206,GO:0070207,GO:0071704,GO:0071840,GO:0072527,GO:0072528,GO:0072529,GO:0090407,GO:1901135,GO:1901136,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 3.6.1.23,4.1.1.36,6.3.2.5 0.00000000000000000000000000000008456 132.0
BYD3_k127_11348_22 Amidohydrolase - - - 0.0000000000000000000000000007006 115.0
BYD3_k127_11348_23 - - - - 0.000000000000000000000000001486 120.0
BYD3_k127_11348_24 - - - - 0.00000000000000000000008068 106.0
BYD3_k127_11348_25 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000000000000000002934 104.0
BYD3_k127_11348_26 Regulatory protein, FmdB family - - - 0.0000000000000000001416 92.0
BYD3_k127_11348_27 - - - - 0.0000000000000000002519 97.0
BYD3_k127_11348_28 Cytochrome C' - - - 0.000000000000000002706 91.0
BYD3_k127_11348_29 - - - - 0.00000000000000009558 87.0
BYD3_k127_11348_3 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009597 462.0
BYD3_k127_11348_30 pfam yhs - - - 0.00000000000324 71.0
BYD3_k127_11348_31 amidohydrolase - - - 0.000000002589 62.0
BYD3_k127_11348_33 - - - - 0.0000007763 58.0
BYD3_k127_11348_34 - - - - 0.0001645 52.0
BYD3_k127_11348_4 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001535 352.0
BYD3_k127_11348_5 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001382 339.0
BYD3_k127_11348_6 Integral membrane protein TerC family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009557 332.0
BYD3_k127_11348_7 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07239 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002267 299.0
BYD3_k127_11348_8 HupE / UreJ protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000111 292.0
BYD3_k127_11348_9 copper resistance - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002129 284.0
BYD3_k127_1162908_0 DNA topological change K03168 - 5.99.1.2 2.539e-236 756.0
BYD3_k127_1162908_1 5TM C-terminal transporter carbon starvation CstA K06200 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004412 529.0
BYD3_k127_1162908_2 long-chain fatty acid transporting porin activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004189 464.0
BYD3_k127_1162908_3 Peptidase M56, BlaR1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004864 306.0
BYD3_k127_1162908_4 Inactivates the type B streptogramin antibiotics by linearizing the lactone ring at the ester linkage, generating a free phenylglycine carboxylate and converting the threonyl moiety into 2-amino-butenoic acid K18235 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000216 282.0
BYD3_k127_1162908_5 Ankyrin repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002443 261.0
BYD3_k127_1162908_6 negative regulation of transcription, DNA-templated - - - 0.000000000000000000000000000000000000006402 148.0
BYD3_k127_1162908_7 - - - - 0.00000000000000000002095 95.0
BYD3_k127_1206889_0 - - - - 0.00000000000001081 87.0
BYD3_k127_1206889_1 Aerobic-type carbon monoxide dehydrogenase small subunit CoxS K07302 - 1.3.99.16 0.00000006964 54.0
BYD3_k127_124293_0 Aminotransferase K14267,K14287 - 2.6.1.17,2.6.1.88 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009005 579.0
BYD3_k127_124293_1 Parallel beta-helix repeats - - - 0.000000000000000000000000000001457 129.0
BYD3_k127_124293_2 Parallel beta-helix repeats - - - 0.000000000000000000003473 103.0
BYD3_k127_1258519_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 1.827e-251 791.0
BYD3_k127_1258519_1 Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA K01610 GO:0003674,GO:0003824,GO:0004611,GO:0004612,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006094,GO:0008150,GO:0008152,GO:0009058,GO:0016051,GO:0016829,GO:0016830,GO:0016831,GO:0019318,GO:0019319,GO:0044238,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046364,GO:0071704,GO:1901576 4.1.1.49 5.713e-222 701.0
BYD3_k127_1258519_10 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.0000000000000000000000000000000000000000000000142 189.0
BYD3_k127_1258519_11 PFAM Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000008131 168.0
BYD3_k127_1258519_12 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 - - 0.00000000000000000000000000000000000009949 144.0
BYD3_k127_1258519_13 Belongs to the ABC-4 integral membrane protein family. FtsX subfamily K09811,K09812 GO:0000910,GO:0005575,GO:0005576,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0006928,GO:0007049,GO:0007154,GO:0007165,GO:0007166,GO:0008150,GO:0008356,GO:0009274,GO:0009276,GO:0009605,GO:0009607,GO:0009615,GO:0009966,GO:0009987,GO:0010033,GO:0010646,GO:0016020,GO:0016021,GO:0016043,GO:0019221,GO:0022402,GO:0022603,GO:0022607,GO:0023051,GO:0023052,GO:0030312,GO:0030313,GO:0031224,GO:0031226,GO:0031975,GO:0032153,GO:0032506,GO:0034097,GO:0040007,GO:0040011,GO:0042173,GO:0042221,GO:0043207,GO:0043937,GO:0043938,GO:0044085,GO:0044425,GO:0044459,GO:0044464,GO:0045595,GO:0045597,GO:0045881,GO:0048518,GO:0048522,GO:0048583,GO:0048870,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051094,GO:0051179,GO:0051301,GO:0051674,GO:0051704,GO:0051707,GO:0051716,GO:0065007,GO:0070098,GO:0070297,GO:0070887,GO:0071310,GO:0071345,GO:0071840,GO:0071944,GO:0071976,GO:0090529,GO:1902531 - 0.0000000000000000000000000000008398 132.0
BYD3_k127_1258519_14 TIGRFAM TonB family protein K03832 - - 0.000000000000000000000000009409 119.0
BYD3_k127_1258519_15 oxidoreductase activity K12511 - - 0.0000000000000000000000003508 116.0
BYD3_k127_1258519_16 Gram-negative bacterial TonB protein C-terminal - - - 0.0000000000000000000001071 109.0
BYD3_k127_1258519_17 TIGRFAM TonB family K03832 - - 0.00000000000000000009293 101.0
BYD3_k127_1258519_18 Sigma-70 region 2 K03088 - - 0.000000000000000001195 94.0
BYD3_k127_1258519_19 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.0000000000001284 72.0
BYD3_k127_1258519_2 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 2.533e-199 646.0
BYD3_k127_1258519_20 Heat induced stress protein YflT - - - 0.000000000002959 74.0
BYD3_k127_1258519_21 Heavy-metal resistance - - - 0.000000000003918 74.0
BYD3_k127_1258519_22 - - - - 0.000000006353 64.0
BYD3_k127_1258519_3 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 GO:0003674,GO:0003824,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016879,GO:0016884,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0050567,GO:0070681,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.3.5.6,6.3.5.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003683 576.0
BYD3_k127_1258519_4 Major facilitator Superfamily K08369 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000095 545.0
BYD3_k127_1258519_5 LytB protein K03527 - 1.17.7.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008339 422.0
BYD3_k127_1258519_6 MOFRL family K11529 - 2.7.1.165 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000193 316.0
BYD3_k127_1258519_7 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000371 265.0
BYD3_k127_1258519_8 Cell division ATP-binding protein ftsE K09811,K09812 GO:0000166,GO:0000287,GO:0000910,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0007049,GO:0008144,GO:0008150,GO:0008356,GO:0009898,GO:0009966,GO:0009987,GO:0010646,GO:0016020,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019897,GO:0019898,GO:0022402,GO:0022603,GO:0022607,GO:0023051,GO:0030145,GO:0030554,GO:0031234,GO:0032153,GO:0032506,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042173,GO:0042221,GO:0043167,GO:0043168,GO:0043169,GO:0043937,GO:0043938,GO:0044085,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0045595,GO:0045597,GO:0045881,GO:0046677,GO:0046872,GO:0046914,GO:0048518,GO:0048522,GO:0048583,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051094,GO:0051301,GO:0065007,GO:0070297,GO:0071840,GO:0071944,GO:0090529,GO:0097159,GO:0097367,GO:0098552,GO:0098562,GO:1901265,GO:1901363,GO:1902531 - 0.000000000000000000000000000000000000000000000000000000000000000000000000004028 258.0
BYD3_k127_1258519_9 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000008858 261.0
BYD3_k127_1261544_0 gluconolactonase activity K01053 - 3.1.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002969 423.0
BYD3_k127_1261544_1 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004891 415.0
BYD3_k127_1261544_10 - - - - 0.00000000000000000000000000000000000001051 158.0
BYD3_k127_1261544_12 1,4-alpha-glucan branching enzyme activity - - - 0.00000000000000000000000000001617 121.0
BYD3_k127_1261544_13 PFAM Stress-induced bacterial acidophilic repeat motif K06884 - - 0.0000000000000001257 82.0
BYD3_k127_1261544_14 glyoxalase III activity K01259 - 3.4.11.5 0.0001202 53.0
BYD3_k127_1261544_15 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885,K09698 - 6.1.1.17,6.1.1.24 0.0002798 45.0
BYD3_k127_1261544_2 WD40 domain protein beta Propeller K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000002669 249.0
BYD3_k127_1261544_3 Protein of unknown function (DUF998) - - - 0.00000000000000000000000000000000000000000000000000000000000002998 226.0
BYD3_k127_1261544_4 - - - - 0.00000000000000000000000000000000000000000000000000000000005797 211.0
BYD3_k127_1261544_5 Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine - - - 0.0000000000000000000000000000000000000000000000000000003847 207.0
BYD3_k127_1261544_6 - - - - 0.000000000000000000000000000000000000000000000000000006621 201.0
BYD3_k127_1261544_7 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000006024 178.0
BYD3_k127_1261544_8 1,4-alpha-glucan branching enzyme activity K00700 - 2.4.1.18 0.0000000000000000000000000000000000000000001392 168.0
BYD3_k127_1261544_9 - - - - 0.0000000000000000000000000000000000000001164 158.0
BYD3_k127_1317726_0 Belongs to the 'phage' integrase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006294 436.0
BYD3_k127_1317726_1 Belongs to the 'phage' integrase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001279 410.0
BYD3_k127_1317726_2 PFAM Integrase core domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001348 266.0
BYD3_k127_1317726_3 Integrase - - - 0.000000000000000000000000000000000000000000000000000000000000008413 233.0
BYD3_k127_1317726_4 PFAM IstB domain protein ATP-binding protein - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0022616,GO:0034641,GO:0034645,GO:0040007,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:1901360,GO:1901576 - 0.0000000000000000000000000000000004056 149.0
BYD3_k127_1317726_5 Bacterial dnaA protein - - - 0.00000000000000005975 92.0
BYD3_k127_1326449_0 lipolytic protein G-D-S-L family - - - 6.458e-215 682.0
BYD3_k127_1326449_1 Tannase and feruloyl esterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000183 488.0
BYD3_k127_1326449_10 - - - - 0.0000000000000000002299 102.0
BYD3_k127_1326449_11 Ami_2 - - - 0.00000000004153 76.0
BYD3_k127_1326449_12 - - - - 0.0000008417 60.0
BYD3_k127_1326449_13 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases - - - 0.000001872 49.0
BYD3_k127_1326449_15 Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC - - - 0.0006819 53.0
BYD3_k127_1326449_2 Belongs to the type-B carboxylesterase lipase family K03929 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004381 401.0
BYD3_k127_1326449_3 lipolytic protein G-D-S-L family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005318 318.0
BYD3_k127_1326449_4 PFAM lipolytic protein G-D-S-L family - - - 0.000000000000000000000000000000000000000000000000000000002948 209.0
BYD3_k127_1326449_5 Peptidase M56, BlaR1 - - - 0.00000000000000000000000000000000000113 153.0
BYD3_k127_1326449_6 - - - - 0.000000000000000000000000000000000001331 153.0
BYD3_k127_1326449_7 Glycosyl transferase, family 2 - - - 0.00000000000000000000001331 116.0
BYD3_k127_1326449_9 - - - - 0.000000000000000000000114 110.0
BYD3_k127_1338658_0 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002056 510.0
BYD3_k127_1338658_1 Belongs to the peptidase M16 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000336 453.0
BYD3_k127_1338658_2 Belongs to the GARS family K01945 - 6.3.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003037 427.0
BYD3_k127_1338658_3 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001142 353.0
BYD3_k127_1338658_4 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 GO:0000049,GO:0000154,GO:0001510,GO:0002935,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008169,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016426,GO:0016433,GO:0016740,GO:0016741,GO:0022613,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0051536,GO:0051539,GO:0051540,GO:0070040,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0140098,GO:0140101,GO:0140102,GO:1901360,GO:1901363 2.1.1.192 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001079 342.0
BYD3_k127_1338658_5 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001538 323.0
BYD3_k127_1338658_6 Uncharacterized protein family UPF0004 K18707 - 2.8.4.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001278 305.0
BYD3_k127_1338658_7 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.0000000000000000007138 89.0
BYD3_k127_1350408_0 DNA topological change - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001383 561.0
BYD3_k127_1350408_1 Protein tyrosine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003189 483.0
BYD3_k127_1350408_2 Protein of unknown function (DUF1552) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006563 311.0
BYD3_k127_1350408_3 O-methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004064 273.0
BYD3_k127_1350408_4 COG1680 Beta-lactamase class C and other penicillin binding proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000002199 245.0
BYD3_k127_1350408_5 ECF sigma factor - - - 0.00000000000000000000000000000000000000000000000000001068 195.0
BYD3_k127_1350408_6 response to abiotic stimulus K06867 - - 0.0000000000000000000000000000000000001887 162.0
BYD3_k127_1350408_7 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000005194 135.0
BYD3_k127_1350408_8 Protein of unknown function (DUF3738) - - - 0.0000000000000000000000001713 116.0
BYD3_k127_1350408_9 Protein of unknown function (DUF3738) - - - 0.0000000000000000000000003646 115.0
BYD3_k127_1357449_0 Acyl-CoA dehydrogenase, N-terminal domain K16173 - 1.3.99.32 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004827 498.0
BYD3_k127_1357449_1 Bacterial fructose-1,6-bisphosphatase, glpX-encoded K02446 - 3.1.3.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001864 419.0
BYD3_k127_1357449_2 Polymer-forming cytoskeletal - - - 0.0000000000000000000005639 98.0
BYD3_k127_1357449_3 methyltransferase - - - 0.0000000000001893 78.0
BYD3_k127_1425256_0 Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000292 423.0
BYD3_k127_1425256_1 XdhC and CoxI family K07402 - - 0.000000000000000000000000000000000000000000000000000000000000003162 225.0
BYD3_k127_1425256_2 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.00000000000000000000000000000000000000000000000000000000000001104 228.0
BYD3_k127_1425256_3 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 GO:0000166,GO:0000774,GO:0001871,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0008150,GO:0009986,GO:0017076,GO:0030234,GO:0030246,GO:0030247,GO:0030554,GO:0036094,GO:0044464,GO:0050790,GO:0051082,GO:0060589,GO:0060590,GO:0065007,GO:0065009,GO:0097159,GO:0098772,GO:1901265,GO:1901363,GO:2001065 - 0.000000000000000000000000000000000003928 151.0
BYD3_k127_1425256_4 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 GO:0006457,GO:0008150,GO:0009987 - 0.000005797 56.0
BYD3_k127_143346_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00281,K00283 - 1.4.4.2 0.0 1173.0
BYD3_k127_143346_1 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 0.0 1114.0
BYD3_k127_143346_10 two component, sigma54 specific, transcriptional regulator, Fis family K02481 - - 0.000000000000000000000000000000000000000000000000000000000000000000008238 252.0
BYD3_k127_143346_11 lactoylglutathione lyase activity - - - 0.000000000000000000000000000000000000000000000000000000000000005713 229.0
BYD3_k127_143346_12 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.0000000000000000000000000000000000000000002459 164.0
BYD3_k127_143346_13 Peptidase family M23 - - - 0.000000000000000000000000000000000000001434 159.0
BYD3_k127_143346_14 ATPase or kinase K06925 - - 0.000000000000000000000000000002769 124.0
BYD3_k127_143346_15 ABC transporter K01990 - - 0.00000000000000000000000656 113.0
BYD3_k127_143346_16 - - - - 0.00000000000000000004675 100.0
BYD3_k127_143346_17 Protein of unknown function (DUF3738) - - - 0.0000000000000004008 89.0
BYD3_k127_143346_18 Helix-hairpin-helix motif K02237 - - 0.000000000000000496 83.0
BYD3_k127_143346_2 PQQ-like domain K00114 - 1.1.2.8 6.608e-257 808.0
BYD3_k127_143346_3 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002682 576.0
BYD3_k127_143346_4 PFAM magnesium chelatase ChlI subunit K07391 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001913 537.0
BYD3_k127_143346_5 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 GO:0003674,GO:0003824,GO:0016829,GO:0016835,GO:0016836,GO:0016853,GO:0016854,GO:0052855,GO:0052856,GO:0052857 4.2.1.136,5.1.99.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007967 412.0
BYD3_k127_143346_6 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007158 379.0
BYD3_k127_143346_7 Lysin motif K08307 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001571 366.0
BYD3_k127_143346_8 TIGRFAM acetaldehyde dehydrogenase (acetylating) K00132 - 1.2.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001857 339.0
BYD3_k127_143346_9 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000002834 250.0
BYD3_k127_1476724_0 WD40-like Beta Propeller Repeat K03641,K07277 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001431 511.0
BYD3_k127_1476724_1 RNA polymerase sigma factor K03088 GO:0005575,GO:0005618,GO:0005623,GO:0006355,GO:0006950,GO:0006979,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0030312,GO:0031323,GO:0031326,GO:0033554,GO:0034605,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051252,GO:0051409,GO:0051716,GO:0060255,GO:0065007,GO:0071944,GO:0080090,GO:1903506,GO:2000112,GO:2001141 - 0.0000000000000000000000000000000000000002462 156.0
BYD3_k127_1476724_2 4Fe-4S dicluster domain K05524 - - 0.00000000000000000000000000000000000001578 147.0
BYD3_k127_1476724_4 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000000000000000000006388 145.0
BYD3_k127_1476724_5 - - - - 0.000000000001357 80.0
BYD3_k127_1476724_6 gag-polyprotein putative aspartyl protease - - - 0.00001534 57.0
BYD3_k127_1476724_7 Putative zinc-finger - - - 0.0004689 51.0
BYD3_k127_1513285_0 Aldehyde dehydrogenase family K00140 - 1.2.1.18,1.2.1.27 5.081e-231 724.0
BYD3_k127_1513285_1 Sugar (and other) transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004112 525.0
BYD3_k127_1513285_10 Involved in the tonB-independent uptake of proteins - - - 0.0000000000000000000000000000000000000000000004595 189.0
BYD3_k127_1513285_11 - - - - 0.00000000000000005955 82.0
BYD3_k127_1513285_12 Von Willebrand factor type A domain K07114 - - 0.0000000000000001619 92.0
BYD3_k127_1513285_13 Protein of unknown function DUF58 - - - 0.000000000000002599 87.0
BYD3_k127_1513285_14 PFAM Mo-dependent nitrogenase - - - 0.000000000000003996 81.0
BYD3_k127_1513285_15 2OG-Fe(II) oxygenase K07394 - - 0.00000000005403 73.0
BYD3_k127_1513285_16 - - - - 0.000000001584 70.0
BYD3_k127_1513285_17 von Willebrand factor type A domain K07114 - - 0.00000000898 67.0
BYD3_k127_1513285_19 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.00005736 46.0
BYD3_k127_1513285_2 Alcohol dehydrogenase GroES-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002009 449.0
BYD3_k127_1513285_3 membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001245 344.0
BYD3_k127_1513285_4 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002961 299.0
BYD3_k127_1513285_5 Putative transposase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003996 276.0
BYD3_k127_1513285_6 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000003939 246.0
BYD3_k127_1513285_7 Site-specific DNA-methyltransferase (Adenine-specific) K06223 - 2.1.1.72 0.00000000000000000000000000000000000000000000000000000000000004799 228.0
BYD3_k127_1513285_8 ATPase family associated with various cellular activities (AAA) K03924 - - 0.00000000000000000000000000000000000000000000002021 186.0
BYD3_k127_1513285_9 COG0589 Universal stress protein UspA and related K14055 - - 0.0000000000000000000000000000000000000000000003511 179.0
BYD3_k127_1559054_0 Phosphate acyltransferases K01897 - 6.2.1.3 2.558e-217 702.0
BYD3_k127_1559054_1 Transport of potassium into the cell K03549 - - 1.72e-216 688.0
BYD3_k127_1559054_2 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008919 479.0
BYD3_k127_1559054_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004828 304.0
BYD3_k127_1559054_4 helicase superfamily c-terminal domain K11927 - 3.6.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009686 278.0
BYD3_k127_1559054_5 NmrA-like family - - - 0.0000000000000000000000000000000000000000000000000000009439 203.0
BYD3_k127_1559054_6 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.0000000000000000000000000000002585 131.0
BYD3_k127_1559054_7 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.00000000000000000001407 92.0
BYD3_k127_1559054_8 - - - - 0.000000008458 67.0
BYD3_k127_1645230_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001114 605.0
BYD3_k127_1645230_1 Dehydrogenase E1 component K11381,K21416 - 1.2.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006454 465.0
BYD3_k127_1645230_2 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00161 - 1.2.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000891 424.0
BYD3_k127_1645230_3 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627 - 2.3.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001148 383.0
BYD3_k127_1645230_4 Phosphopantetheine attachment site - - - 0.0000000000000003822 87.0
BYD3_k127_1646228_0 phage tail tape measure protein - - - 1.766e-196 659.0
BYD3_k127_1646228_1 pyrroloquinoline quinone binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006525 564.0
BYD3_k127_1646228_10 LysM domain - - - 0.0000000000000000000000000000000000000000000000000006073 190.0
BYD3_k127_1646228_11 phage tail - - - 0.000000000000000000000000000000000000000000000000003881 187.0
BYD3_k127_1646228_12 - - - - 0.00000000000000000000000000000000000000000000145 167.0
BYD3_k127_1646228_13 PFAM Phage-related baseplate assembly protein - - - 0.000000000000000000000000000000000000000000003201 173.0
BYD3_k127_1646228_14 phage tail region protein - - - 0.000000000000000000000000000000000000008143 156.0
BYD3_k127_1646228_15 Baseplate J-like protein - - - 0.00000000000000000000000000000000007741 154.0
BYD3_k127_1646228_16 Protein of unknown function (DUF4255) - - - 0.000000000000000000000000000000003182 135.0
BYD3_k127_1646228_17 GPW gp25 family protein K06903 - - 0.0000000000000000000000000000002824 134.0
BYD3_k127_1646228_18 PFAM Polysaccharide deacetylase - - - 0.000000000000000000000000001472 121.0
BYD3_k127_1646228_19 Tail protein - - - 0.00000000000000000002961 101.0
BYD3_k127_1646228_2 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001966 424.0
BYD3_k127_1646228_20 Integral membrane protein CcmA involved in cell shape determination - - - 0.0000000000000000007023 90.0
BYD3_k127_1646228_21 - - - - 0.0000000006316 66.0
BYD3_k127_1646228_3 PFAM Phage tail sheath protein K06907 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004642 441.0
BYD3_k127_1646228_4 Belongs to the peptidase S1B family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001068 453.0
BYD3_k127_1646228_5 ATPase family associated with various cellular activities (AAA) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001701 414.0
BYD3_k127_1646228_6 Phage tail sheath C-terminal domain K06907 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005952 400.0
BYD3_k127_1646228_7 phosphorelay signal transduction system - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001125 351.0
BYD3_k127_1646228_8 PFAM Phage late control gene D protein (GPD) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001585 268.0
BYD3_k127_1646228_9 PFAM Phage tail sheath protein K06907 - - 0.0000000000000000000000000000000000000000000000000001317 212.0
BYD3_k127_1668590_0 Belongs to the malate synthase family K01638 - 2.3.3.9 7.899e-304 941.0
BYD3_k127_1668590_1 abc transporter atp-binding protein K02013 - 3.6.3.34 0.0000000000000000000000000000000000000000000000000000000000000000000000000007757 262.0
BYD3_k127_1668590_2 L,D-transpeptidase catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000003808 244.0
BYD3_k127_1668590_3 Serine aminopeptidase, S33 K19311 GO:0003674,GO:0003824,GO:0005488,GO:0005504,GO:0006082,GO:0006629,GO:0006631,GO:0008150,GO:0008152,GO:0008289,GO:0009056,GO:0009062,GO:0009268,GO:0009628,GO:0009987,GO:0010447,GO:0016042,GO:0016054,GO:0016298,GO:0016787,GO:0016788,GO:0019752,GO:0031406,GO:0032787,GO:0033293,GO:0036094,GO:0043167,GO:0043168,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0046395,GO:0050896,GO:0051716,GO:0071214,GO:0071467,GO:0071468,GO:0071704,GO:0072329,GO:0104004,GO:1901575 - 0.000000000000000000000000000000000000003022 158.0
BYD3_k127_1668590_4 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000001327 141.0
BYD3_k127_1668590_5 GYD domain - - - 0.000000000000000000000000001703 118.0
BYD3_k127_1668590_6 - - - - 0.000000000000000009535 85.0
BYD3_k127_1668590_7 Domain of unknown function (DUF4349) - - - 0.000000000000000071 93.0
BYD3_k127_1668590_8 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000007239 85.0
BYD3_k127_1668590_9 Putative zinc-finger - - - 0.0005042 52.0
BYD3_k127_1668965_0 1,4-alpha-glucan branching enzyme activity K00700,K01236 GO:0000271,GO:0003674,GO:0003824,GO:0003844,GO:0005975,GO:0005976,GO:0005977,GO:0005978,GO:0006073,GO:0006091,GO:0006112,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009250,GO:0009987,GO:0015980,GO:0016051,GO:0016740,GO:0016757,GO:0016758,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0055114,GO:0071704,GO:1901576 2.4.1.18,3.2.1.141 1.298e-307 958.0
BYD3_k127_1668965_1 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle K01595 GO:0003674,GO:0003824,GO:0004611,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0008964,GO:0009060,GO:0009987,GO:0015980,GO:0016829,GO:0016830,GO:0016831,GO:0016999,GO:0017144,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045333,GO:0055114,GO:0071704,GO:0072350 4.1.1.31 8.775e-252 805.0
BYD3_k127_1668965_10 amino acid-binding ACT domain protein K04518 - 4.2.1.51 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007185 291.0
BYD3_k127_1668965_11 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 - 2.5.1.129 0.0000000000000000000000000000000000000000000000000000000000000000000000000009786 261.0
BYD3_k127_1668965_12 Cupin 2 conserved barrel domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000005914 237.0
BYD3_k127_1668965_13 COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family K03767,K03768 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000003906 229.0
BYD3_k127_1668965_14 SelR domain K07305 - 1.8.4.12 0.000000000000000000000000000000000000000000000000000000000000000005158 227.0
BYD3_k127_1668965_15 gluconolactonase activity K01053 - 3.1.1.17 0.00000000000000000000000000000000000000000000000000000000000000004363 237.0
BYD3_k127_1668965_16 Rhomboid family - - - 0.0000000000000000000000000000000000000000000000000000000000000009199 229.0
BYD3_k127_1668965_17 - - - - 0.000000000000000000000000000000000000000000000000000000000000002293 228.0
BYD3_k127_1668965_18 rRNA methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000003879 221.0
BYD3_k127_1668965_19 pfkB family carbohydrate kinase K18478 - 2.7.1.184 0.0000000000000000000000000000000000000000000000000000000005652 213.0
BYD3_k127_1668965_2 Dehydrogenase K00114 - 1.1.2.8 1.091e-196 634.0
BYD3_k127_1668965_20 Protein tyrosine kinase - - - 0.000000000000000000000000000000000000000000000000002671 203.0
BYD3_k127_1668965_21 COG2335 Secreted and surface protein containing fasciclin-like repeats - - - 0.000000000000000000000000000000000000000000000000007033 188.0
BYD3_k127_1668965_22 G/U mismatch-specific uracil-DNA glycosylase activity K01934,K03649 GO:0000700,GO:0003674,GO:0003824,GO:0004844,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006285,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008263,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097506,GO:0140097,GO:1901360 3.2.2.28,6.3.3.2 0.00000000000000000000000000000000000000000000000001871 185.0
BYD3_k127_1668965_23 DNA-templated transcription, initiation K02405 - - 0.00000000000000000000000000000000000000000000000004599 183.0
BYD3_k127_1668965_24 NADPH-dependent FMN reductase K19784 - - 0.00000000000000000000000000000000000000000000009106 173.0
BYD3_k127_1668965_25 Lipocalin-like domain K03098 - - 0.000000000000000000000000000000000000000000002167 188.0
BYD3_k127_1668965_26 Protein kinase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000001179 171.0
BYD3_k127_1668965_27 ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component - - - 0.0000000000000000000000000000000000000002195 157.0
BYD3_k127_1668965_28 EVE domain - - - 0.0000000000000000000000000000000000000002355 153.0
BYD3_k127_1668965_29 WHG domain - - - 0.00000000000000000000000000000000001326 145.0
BYD3_k127_1668965_3 Luciferase-like monooxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004484 607.0
BYD3_k127_1668965_30 Winged helix DNA-binding domain - - - 0.00000000000000000000000000000000002347 138.0
BYD3_k127_1668965_31 - - - - 0.000000000000000000000000001115 118.0
BYD3_k127_1668965_32 GDP-mannose mannosyl hydrolase activity K01515,K03574,K12944 - 3.6.1.13,3.6.1.55 0.0000000000000000002721 96.0
BYD3_k127_1668965_33 - - - - 0.000000000000000002192 96.0
BYD3_k127_1668965_34 cheY-homologous receiver domain - - - 0.0000000000000001634 86.0
BYD3_k127_1668965_35 GDP-mannose mannosyl hydrolase activity K01515,K03574,K12944 - 3.6.1.13,3.6.1.55 0.000000000000005789 82.0
BYD3_k127_1668965_36 cytochrome c oxidase subunit II K02275 - 1.9.3.1 0.0000000000000381 76.0
BYD3_k127_1668965_37 - - - - 0.00000000000111 75.0
BYD3_k127_1668965_38 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.000000000003511 77.0
BYD3_k127_1668965_39 Barrel-sandwich domain of CusB or HlyD membrane-fusion K15727 - - 0.00000006382 66.0
BYD3_k127_1668965_4 2-nitropropane dioxygenase K00459 - 1.13.12.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002846 496.0
BYD3_k127_1668965_40 - - - - 0.000004756 56.0
BYD3_k127_1668965_41 CHRD domain - - - 0.000006854 57.0
BYD3_k127_1668965_5 Protein of unknown function (DUF2867) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002775 499.0
BYD3_k127_1668965_6 lysine biosynthetic process via aminoadipic acid - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001322 407.0
BYD3_k127_1668965_7 Glucose / Sorbosone dehydrogenase K21430 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002649 352.0
BYD3_k127_1668965_8 ADP binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002034 350.0
BYD3_k127_1668965_9 Protein of unknown function (DUF1722) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000322 344.0
BYD3_k127_1695740_0 NADH ubiquinone oxidoreductase subunit 5 (chain L) K05577 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003115 318.0
BYD3_k127_1695740_1 NADH ubiquinone oxidoreductase subunit 4 (Chain M) K00342 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000964 241.0
BYD3_k127_1695740_2 - - - - 0.00000000000000000000000000005242 120.0
BYD3_k127_1722692_0 Type II/IV secretion system protein K02669 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001415 462.0
BYD3_k127_1722692_1 Major facilitator K06902 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003572 443.0
BYD3_k127_1722692_2 PFAM Glycosyl transferase, group 1 K00754 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001775 424.0
BYD3_k127_1722692_3 PFAM NAD dependent epimerase dehydratase family K07071 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001732 260.0
BYD3_k127_1722692_4 deacetylase K01463 - - 0.0000000000000000000000000000000000000000000000000000000000003826 222.0
BYD3_k127_1722692_5 Amino acid oxidase - - - 0.000000000000000000000000000000002448 144.0
BYD3_k127_1722692_6 Transcriptional regulatory protein, C terminal - - - 0.0000000000000000008823 100.0
BYD3_k127_1722692_7 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K04750 - - 0.00000000001108 74.0
BYD3_k127_1722692_8 Tetratricopeptide repeat - - - 0.0001309 54.0
BYD3_k127_1744198_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787,K15726 - - 0.0 1195.0
BYD3_k127_1744198_1 PFAM CobN magnesium chelatase K02230 - 6.6.1.2 0.0 1077.0
BYD3_k127_1744198_10 - - - - 0.00000000000000000000000000000000000002146 152.0
BYD3_k127_1744198_11 Uncharacterized conserved protein (DUF2149) - - - 0.00000000000000000000000000001572 128.0
BYD3_k127_1744198_12 Polyketide cyclase / dehydrase and lipid transport - - - 0.0000000000000000000000001104 120.0
BYD3_k127_1744198_13 Cupin 2, conserved barrel domain protein - - - 0.000000000000000000000005215 106.0
BYD3_k127_1744198_15 COG0811 Biopolymer transport proteins - - - 0.0000000000000000000001234 108.0
BYD3_k127_1744198_16 PFAM Outer membrane efflux protein K15725 - - 0.000000000000000435 91.0
BYD3_k127_1744198_2 copper-translocating P-type ATPase K01533 - 3.6.3.4 6.314e-277 868.0
BYD3_k127_1744198_3 lysine biosynthetic process via aminoadipic acid - - - 6.547e-250 797.0
BYD3_k127_1744198_4 radical SAM domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001229 577.0
BYD3_k127_1744198_5 TonB-dependent Receptor Plug Domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003275 561.0
BYD3_k127_1744198_6 TIGRFAM Glyceraldehyde-3-phosphate dehydrogenase, type II K00150 - 1.2.1.59 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001031 533.0
BYD3_k127_1744198_7 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004506 306.0
BYD3_k127_1744198_8 Activator of Hsp90 ATPase 1 family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000008893 242.0
BYD3_k127_1744198_9 PepSY-associated TM region - - - 0.000000000000000000000000000000000000000000000000000000000002169 224.0
BYD3_k127_1804380_0 PFAM type II secretion system protein E K02283 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003847 524.0
BYD3_k127_1804380_1 ATPases associated with a variety of cellular activities - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009237 358.0
BYD3_k127_1804380_2 Type II secretion system K12511 - - 0.0000000000000000000000000000000000000000000000000000002773 204.0
BYD3_k127_1804380_3 Type II secretion system K12510 - - 0.0000000000000000000000000000000000000000000000000007583 195.0
BYD3_k127_1804380_4 Tetratricopeptide repeat - - - 0.00003956 55.0
BYD3_k127_18083_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 1.12e-317 1005.0
BYD3_k127_18083_1 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 1.22e-279 882.0
BYD3_k127_18083_10 PFAM Histidine triad (HIT) protein K02503 - - 0.0000000000000000000000000000000000000000000004302 174.0
BYD3_k127_18083_11 endoribonuclease L-PSP K09022 - 3.5.99.10 0.0000000000000000000000000000000000000008021 151.0
BYD3_k127_18083_12 - - - - 0.00000000000000000000000000000000000184 147.0
BYD3_k127_18083_13 Hydrolase, NUDIX family K01515 - 3.6.1.13 0.0000000000000000000000000000000001376 139.0
BYD3_k127_18083_14 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.0000000000000000000000000000003832 128.0
BYD3_k127_18083_15 Belongs to the bacterial ribosomal protein bL28 family K02902 GO:0003674,GO:0003735,GO:0005198 - 0.000000000000000000002201 94.0
BYD3_k127_18083_16 Haloacid dehalogenase-like hydrolase K07025 - - 0.00000000000000000000383 107.0
BYD3_k127_18083_17 Prokaryotic dksA/traR C4-type zinc finger K06204 - - 0.00000000000000001591 89.0
BYD3_k127_18083_18 Tetratricopeptide repeat - - - 0.00000000000001517 85.0
BYD3_k127_18083_19 - - - - 0.00000000004132 72.0
BYD3_k127_18083_2 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 2.947e-249 788.0
BYD3_k127_18083_20 PFAM Biopolymer transport protein ExbD TolR K03560 - - 0.000001405 54.0
BYD3_k127_18083_3 Carboxypeptidase regulatory-like domain - - - 5.313e-198 659.0
BYD3_k127_18083_4 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006913 452.0
BYD3_k127_18083_5 PFAM peptidase M16 domain protein K07263 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001121 344.0
BYD3_k127_18083_6 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002549 275.0
BYD3_k127_18083_7 Insulinase (Peptidase family M16) K07263 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003671 280.0
BYD3_k127_18083_8 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.00000000000000000000000000000000000000000000000000000000000000001045 233.0
BYD3_k127_18083_9 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 - 2.1.1.297 0.000000000000000000000000000000000000000000000000001889 192.0
BYD3_k127_1819310_0 Cobalamin-independent synthase, Catalytic domain K00549 - 2.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009477 484.0
BYD3_k127_1819310_1 Uncharacterised MFS-type transporter YbfB K05548,K05819,K08195 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001075 447.0
BYD3_k127_1819310_2 TonB-dependent receptor - - - 0.000000000000000000000000000000000000000000000000000000006117 228.0
BYD3_k127_1819310_3 Glycosyltransferase family 87 K13671 - - 0.00000000001972 76.0
BYD3_k127_1977862_0 Q COG3321 Polyketide synthase modules and related proteins - - - 0.0 1062.0
BYD3_k127_1977862_1 Beta-ketoacyl synthase, N-terminal domain - - - 7.322e-195 625.0
BYD3_k127_1980727_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002694 475.0
BYD3_k127_1980727_1 efflux transmembrane transporter activity K02004 - - 0.000000000000000000000000000000000001595 151.0
BYD3_k127_1980727_2 COG0577 ABC-type antimicrobial peptide transport system permease component - - - 0.000001503 55.0
BYD3_k127_1987427_0 NHL repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008099 503.0
BYD3_k127_1987427_1 Ring hydroxylating alpha subunit (catalytic domain) K00479 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004093 468.0
BYD3_k127_1987427_10 DNA-templated transcription, initiation - - - 0.000000000000000000000000000000000000000000000000000000000000000000006019 245.0
BYD3_k127_1987427_11 Maleate cis-trans isomerase - - - 0.00000000000000000000000000000000000000000000000000000000000000164 227.0
BYD3_k127_1987427_12 oxidoreductase activity - - - 0.0000000000000000000000000000000000000000005004 179.0
BYD3_k127_1987427_13 - K02172 - - 0.0000000000000000000000000000000000000009259 163.0
BYD3_k127_1987427_14 protein histidine kinase activity - - - 0.0000000000000000000000000000000000002677 147.0
BYD3_k127_1987427_15 lactoylglutathione lyase activity K03088 - - 0.00000000000000000000000000000000007622 149.0
BYD3_k127_1987427_16 - - - - 0.00000000000000000000000000000001307 136.0
BYD3_k127_1987427_17 - - - - 0.00000000000000000000000000000002944 143.0
BYD3_k127_1987427_18 - - - - 0.0000000000000000000000000006037 126.0
BYD3_k127_1987427_19 - - - - 0.000000000000000000000005923 115.0
BYD3_k127_1987427_2 COG0477 Permeases of the major facilitator superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003631 456.0
BYD3_k127_1987427_20 Haloacid dehalogenase-like hydrolase K01560 - 3.8.1.2 0.0000000000000000001108 95.0
BYD3_k127_1987427_21 - - - - 0.0000000000000007673 84.0
BYD3_k127_1987427_22 - - - - 0.000000001046 70.0
BYD3_k127_1987427_24 Glyoxalase bleomycin resistance protein dioxygenase K01759 - 4.4.1.5 0.00000004586 64.0
BYD3_k127_1987427_25 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K08234 - - 0.0005324 51.0
BYD3_k127_1987427_3 glucose sorbosone - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001106 402.0
BYD3_k127_1987427_4 Putative esterase K07214 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009176 387.0
BYD3_k127_1987427_5 NHL repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000314 383.0
BYD3_k127_1987427_6 cytochrome c peroxidase K00428 - 1.11.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009734 328.0
BYD3_k127_1987427_7 glucose sorbosone - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007344 319.0
BYD3_k127_1987427_8 cAMP biosynthetic process K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000184 303.0
BYD3_k127_1987427_9 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000008251 259.0
BYD3_k127_1999272_0 DNA topological change K03168 - 5.99.1.2 8.296e-239 767.0
BYD3_k127_1999272_1 MmgE PrpD family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002063 554.0
BYD3_k127_1999272_10 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components K02051 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002557 348.0
BYD3_k127_1999272_11 response to abiotic stimulus K06867 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009178 360.0
BYD3_k127_1999272_12 abc transporter atp-binding protein K02049 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003155 334.0
BYD3_k127_1999272_13 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001413 292.0
BYD3_k127_1999272_14 N-terminal half of MaoC dehydratase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003784 269.0
BYD3_k127_1999272_15 KR domain K00019 - 1.1.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000001031 271.0
BYD3_k127_1999272_16 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001032 282.0
BYD3_k127_1999272_17 lactoylglutathione lyase activity K03088 - - 0.000000000000000000000000000000000000000000000000000005555 201.0
BYD3_k127_1999272_18 HpcH/HpaI aldolase/citrate lyase family K18292 - 4.1.3.25 0.00000000000000000000000000000002584 128.0
BYD3_k127_1999272_19 Peptidase M56, BlaR1 - - - 0.00000000000000000000001017 113.0
BYD3_k127_1999272_2 MmgE/PrpD family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001274 549.0
BYD3_k127_1999272_20 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000000000000009587 98.0
BYD3_k127_1999272_21 Cupin domain - - - 0.00000000000000004489 87.0
BYD3_k127_1999272_22 - - - - 0.0000000000000002477 81.0
BYD3_k127_1999272_23 Hydrolyase tartrate alpha subunit fumarate domain protein Fe-S type K01677 - 4.2.1.2 0.00000000001731 67.0
BYD3_k127_1999272_24 TIGRFAM hydro-lyases, Fe-S type, tartrate fumarate subfamily, alpha region K01677 - 4.2.1.2 0.000003869 56.0
BYD3_k127_1999272_3 PFAM L-carnitine dehydratase bile acid-inducible protein F - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000122 544.0
BYD3_k127_1999272_4 PQQ-like domain K00114 - 1.1.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005189 510.0
BYD3_k127_1999272_5 Domain of unknown function (DUF4139) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006824 517.0
BYD3_k127_1999272_6 long-chain fatty acid transporting porin activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001097 499.0
BYD3_k127_1999272_7 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00058 - 1.1.1.399,1.1.1.95 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005729 449.0
BYD3_k127_1999272_8 PFAM Glucose Sorbosone dehydrogenase K21430 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003414 395.0
BYD3_k127_1999272_9 ABC-type nitrate sulfonate bicarbonate transport system, permease component K02050 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000174 362.0
BYD3_k127_2045007_0 Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit K00122 - 1.17.1.9 1.78e-269 840.0
BYD3_k127_2045007_1 MoeA domain protein domain I and II K03750,K07219 - 2.10.1.1 6.683e-239 755.0
BYD3_k127_2045007_10 Domain of unknown function (DUF4919) - - - 0.000000000000000000002034 108.0
BYD3_k127_2045007_11 von Willebrand factor, type A K07114 - - 0.000000000000000000008271 104.0
BYD3_k127_2045007_13 transcriptional regulator, SARP family - - - 0.0002606 53.0
BYD3_k127_2045007_2 Aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 7.611e-204 651.0
BYD3_k127_2045007_3 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00123,K22015 - 1.17.1.9,1.17.99.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001514 556.0
BYD3_k127_2045007_4 COG1228 Imidazolonepropionase and related amidohydrolases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004763 484.0
BYD3_k127_2045007_5 Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide K07147 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002168 379.0
BYD3_k127_2045007_6 Molybdenum Cofactor Synthesis K03750 - 2.10.1.1 0.00000000000000000000000000000000000000000000000000000000000000000001641 248.0
BYD3_k127_2045007_7 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.000000000000000000000000000000000000000000000000005347 189.0
BYD3_k127_2045007_8 nitrite transmembrane transporter activity K08177 - - 0.0000000000000000000000000000000000000000000326 165.0
BYD3_k127_2045007_9 Peptidase M56, BlaR1 - - - 0.000000000000000000000000000000000000000000656 170.0
BYD3_k127_2046394_0 UvrD/REP helicase N-terminal domain - - - 4.91e-294 942.0
BYD3_k127_2046394_1 Belongs to the ClpA ClpB family K03696 - - 7.538e-290 907.0
BYD3_k127_2046394_10 Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine K00684 - 2.3.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004329 276.0
BYD3_k127_2046394_11 tRNA synthetases class I (E and Q), catalytic domain K01894 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003514 273.0
BYD3_k127_2046394_12 double-stranded DNA 3'-5' exodeoxyribonuclease activity K01142 - 3.1.11.2 0.000000000000000000000000000000000000000000000000000000000000000000000000008617 265.0
BYD3_k127_2046394_13 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000105 258.0
BYD3_k127_2046394_14 Catalyzes the oxidation of either pyridoxine 5'- phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP) K00275 - 1.4.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000008885 248.0
BYD3_k127_2046394_15 Protein of unknown function, DUF488 - - - 0.000000000000000000000000000000000000000000004928 166.0
BYD3_k127_2046394_17 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation K06891 GO:0003674,GO:0005488,GO:0005515,GO:0006950,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0050896,GO:0051087 - 0.0000000000000000000000000004069 116.0
BYD3_k127_2046394_18 4Fe-4S dicluster domain K05524 - - 0.0000000000000000000000000006068 120.0
BYD3_k127_2046394_19 PFAM RNP-1 like RNA-binding protein - - - 0.000000000000000009929 92.0
BYD3_k127_2046394_2 WD40-like Beta Propeller Repeat - - - 5.454e-247 796.0
BYD3_k127_2046394_20 BON domain - - - 0.00000000000000003179 90.0
BYD3_k127_2046394_21 Parallel beta-helix repeats - - - 0.0000000000000005695 84.0
BYD3_k127_2046394_22 - - - - 0.000000000000001645 89.0
BYD3_k127_2046394_23 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K07027 - - 0.000000003333 68.0
BYD3_k127_2046394_24 - - - - 0.0000005318 54.0
BYD3_k127_2046394_3 PD-(D/E)XK nuclease superfamily - - - 1.645e-242 788.0
BYD3_k127_2046394_4 MacB-like periplasmic core domain - - - 5.047e-223 716.0
BYD3_k127_2046394_5 MacB-like periplasmic core domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002382 559.0
BYD3_k127_2046394_6 ABC1 family K03688 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009229 533.0
BYD3_k127_2046394_7 Tannase and feruloyl esterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004495 465.0
BYD3_k127_2046394_8 Iron-regulated membrane protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003559 433.0
BYD3_k127_2046394_9 PFAM Glucose Sorbosone dehydrogenase K21430 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001499 325.0
BYD3_k127_2062542_0 Belongs to the UDP-N-acetylglucosamine 2-epimerase family K01791,K13019 - 5.1.3.14,5.1.3.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004035 408.0
BYD3_k127_2062542_1 ANTAR - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006848 310.0
BYD3_k127_2062542_2 PFAM Phenazine biosynthesis PhzC PhzF protein K06998 - 5.3.3.17 0.000000000000000000000000000000000000000000000000000000000000000000000004325 254.0
BYD3_k127_2062542_3 polygalacturonase activity - - - 0.0000000000000000000000000001874 123.0
BYD3_k127_2062542_4 - - - - 0.000000007639 64.0
BYD3_k127_2072208_0 Multicopper oxidase K08100 - 1.3.3.5 4.3e-239 760.0
BYD3_k127_2072208_1 nitrogen compound transport K02033 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002364 370.0
BYD3_k127_2072208_2 PFAM binding-protein-dependent transport systems inner membrane component K02034 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001697 301.0
BYD3_k127_2072208_3 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000004283 136.0
BYD3_k127_2072208_4 Tetratricopeptide repeat - - - 0.000000003355 69.0
BYD3_k127_2082961_0 Alpha-L-arabinofuranosidase B, catalytic - - - 1.301e-239 775.0
BYD3_k127_2082961_1 Glucose / Sorbosone dehydrogenase K21430 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001206 551.0
BYD3_k127_2082961_10 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.00000000000000000000000000000000000000001588 166.0
BYD3_k127_2082961_11 - - - - 0.000000000000000000000000000000000001568 149.0
BYD3_k127_2082961_12 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) - - - 0.000000000000000000004047 108.0
BYD3_k127_2082961_13 Major Facilitator Superfamily K13021 - - 0.00000000000000000005585 103.0
BYD3_k127_2082961_14 - - - - 0.000000000000000006256 89.0
BYD3_k127_2082961_15 2-hydroxyglutaryl-CoA dehydratase, D-component - - - 0.00000000000000007427 92.0
BYD3_k127_2082961_2 arylsulfatase activity K01132 - 3.1.6.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001415 482.0
BYD3_k127_2082961_3 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001648 463.0
BYD3_k127_2082961_4 2-hydroxyglutaryl-CoA dehydratase, D-component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004411 399.0
BYD3_k127_2082961_5 CoA-transferase family III - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003485 385.0
BYD3_k127_2082961_6 alpha/beta hydrolase fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007964 298.0
BYD3_k127_2082961_7 peptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002578 277.0
BYD3_k127_2082961_8 phospholipase Carboxylesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003484 271.0
BYD3_k127_2082961_9 serine-type peptidase activity - - - 0.0000000000000000000000000000000000000000000000000001136 199.0
BYD3_k127_2088321_0 Putative glucoamylase K13688 - - 0.0 2385.0
BYD3_k127_2088321_1 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain - - - 5.987e-240 762.0
BYD3_k127_2088321_10 lactoylglutathione lyase activity K05606 - 5.1.99.1 0.000000000000000000000000000000001092 133.0
BYD3_k127_2088321_11 - - - - 0.0000000000000000000000001654 112.0
BYD3_k127_2088321_12 SnoaL-like domain - - - 0.000000000000000703 83.0
BYD3_k127_2088321_14 - K22014 - - 0.000000000002505 74.0
BYD3_k127_2088321_15 - - - - 0.00000188 62.0
BYD3_k127_2088321_16 - - - - 0.00004968 51.0
BYD3_k127_2088321_2 Protein tyrosine kinase K12132 - 2.7.11.1 9.121e-198 650.0
BYD3_k127_2088321_3 Putative diguanylate phosphodiesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001564 550.0
BYD3_k127_2088321_5 Glycosyltransferase Family 4 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002785 445.0
BYD3_k127_2088321_6 cytochrome p450 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001079 417.0
BYD3_k127_2088321_7 Putative restriction endonuclease - - - 0.00000000000000000000000000000000000000000000000000000003048 205.0
BYD3_k127_2144302_0 Isocitrate/isopropylmalate dehydrogenase K07246 GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0003862,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006108,GO:0006520,GO:0006551,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009027,GO:0009058,GO:0009081,GO:0009082,GO:0009098,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016615,GO:0016616,GO:0019752,GO:0036094,GO:0043167,GO:0043169,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046553,GO:0046872,GO:0048037,GO:0050662,GO:0051287,GO:0055114,GO:0071704,GO:0097159,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.83,1.1.1.93,4.1.1.73 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002493 499.0
BYD3_k127_2144302_1 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009366 312.0
BYD3_k127_2144302_10 Protein of unknown function (DUF3738) K02172 - - 0.00000000000000000004269 101.0
BYD3_k127_2144302_11 - - - - 0.0002151 49.0
BYD3_k127_2144302_2 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 - 6.3.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000516 306.0
BYD3_k127_2144302_3 Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000288 283.0
BYD3_k127_2144302_4 Domain of unknown function (DUF2520) - - - 0.000000000000000000000000000000000000000000000000000000009238 210.0
BYD3_k127_2144302_5 PFAM dehydrogenase, E1 component K00161,K21416 - 1.2.4.1 0.00000000000000000000000000000000000001576 159.0
BYD3_k127_2144302_6 thiolester hydrolase activity K06889 - - 0.000000000000000000000000000000000002963 156.0
BYD3_k127_2144302_7 PFAM glycine cleavage T protein (aminomethyl transferase) K00605 - 2.1.2.10 0.000000000000000000000000000000000004264 150.0
BYD3_k127_2144302_8 Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine K01579 - 4.1.1.11 0.000000000000000000000000000000003044 132.0
BYD3_k127_2144302_9 Protein of unknown function (DUF3738) - - - 0.0000000000000000000000000001811 126.0
BYD3_k127_2170740_0 metalloendopeptidase activity K08602 GO:0003674,GO:0003824,GO:0004175,GO:0004222,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006465,GO:0006508,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009987,GO:0010467,GO:0016485,GO:0016787,GO:0019538,GO:0034641,GO:0043170,GO:0043603,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0051604,GO:0070011,GO:0071704,GO:0140096,GO:1901564 - 1.368e-202 648.0
BYD3_k127_2170740_1 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000503 554.0
BYD3_k127_2170740_10 Protein tyrosine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001554 433.0
BYD3_k127_2170740_11 Belongs to the D-alanine--D-alanine ligase family K01921,K01955 - 6.3.2.4,6.3.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003319 404.0
BYD3_k127_2170740_12 Pyridine nucleotide-disulphide oxidoreductase K00384 - 1.8.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001857 396.0
BYD3_k127_2170740_13 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003835 355.0
BYD3_k127_2170740_14 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004249 359.0
BYD3_k127_2170740_15 Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX K00231 - 1.3.3.15,1.3.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003478 359.0
BYD3_k127_2170740_16 Belongs to the arginase family K01476 GO:0003674,GO:0003824,GO:0004053,GO:0006082,GO:0006520,GO:0006525,GO:0006807,GO:0008150,GO:0008152,GO:0009064,GO:0009987,GO:0016787,GO:0016810,GO:0016813,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0071704,GO:1901564,GO:1901605 3.5.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005084 320.0
BYD3_k127_2170740_17 methylase K00571 - 2.1.1.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001252 319.0
BYD3_k127_2170740_18 Type II/IV secretion system protein K02669 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001251 292.0
BYD3_k127_2170740_19 Uncharacterized conserved protein (COG2071) K09166 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006536 268.0
BYD3_k127_2170740_2 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001387 574.0
BYD3_k127_2170740_20 COG0745 Response regulators consisting of a CheY-like receiver - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000404 247.0
BYD3_k127_2170740_21 Histone methylation protein DOT1 - - - 0.000000000000000000000000000000000000000000000000000000000000000003923 235.0
BYD3_k127_2170740_22 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000005878 236.0
BYD3_k127_2170740_23 DNA-templated transcription, initiation - - - 0.000000000000000000000000000000000000000000000000000000000007648 214.0
BYD3_k127_2170740_24 - - - - 0.0000000000000000000000000000000000000000000000000000001406 205.0
BYD3_k127_2170740_25 Ribose/Galactose Isomerase K01808 - 5.3.1.6 0.0000000000000000000000000000000000000000000000000004358 188.0
BYD3_k127_2170740_26 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase K01057 - 3.1.1.31 0.00000000000000000000000000000000000000000000000003999 188.0
BYD3_k127_2170740_27 DinB family - - - 0.00000000000000000000000000000000000000000008059 171.0
BYD3_k127_2170740_28 Cupin 2, conserved barrel domain protein - - - 0.00000000000000000000000000000000000000001326 158.0
BYD3_k127_2170740_29 Belongs to the peptidase S11 family K01286,K07258,K07262 GO:0000003,GO:0000270,GO:0000910,GO:0003674,GO:0003824,GO:0004175,GO:0005575,GO:0005623,GO:0006022,GO:0006508,GO:0006807,GO:0007049,GO:0008150,GO:0008152,GO:0008233,GO:0009987,GO:0016043,GO:0016787,GO:0019538,GO:0019954,GO:0022402,GO:0022414,GO:0030203,GO:0032505,GO:0042221,GO:0042493,GO:0042597,GO:0043093,GO:0043170,GO:0044238,GO:0044464,GO:0045229,GO:0050896,GO:0051301,GO:0070011,GO:0071554,GO:0071555,GO:0071704,GO:0071840,GO:0140096,GO:1901135,GO:1901564 3.4.16.4 0.000000000000000000000000000000000000001621 162.0
BYD3_k127_2170740_3 CotH kinase protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004324 465.0
BYD3_k127_2170740_30 Bacterial regulatory helix-turn-helix protein, lysR family - - - 0.000000000000000000000000000000000000001678 159.0
BYD3_k127_2170740_31 Domain of unknown function (DUF4956) - - - 0.000000000000000000000000000000000000008503 154.0
BYD3_k127_2170740_32 VTC domain - - - 0.00000000000000000000000000000000000003425 153.0
BYD3_k127_2170740_33 PFAM SNARE associated Golgi protein - - - 0.0000000000000000000000000000000000001216 149.0
BYD3_k127_2170740_34 - K02172 - - 0.00000000000000000000000000000000000115 149.0
BYD3_k127_2170740_35 Component of the thioredoxin-thioredoxin reductase system. Participates in various redox reactions through the reversible oxidation of its active center dithiol to a disulfide and catalyzes dithiol-disulfide exchange reactions (By similarity) K03671 GO:0003674,GO:0003824,GO:0004791,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009636,GO:0009987,GO:0015035,GO:0015036,GO:0016209,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0016671,GO:0019725,GO:0033554,GO:0034599,GO:0042221,GO:0042592,GO:0044424,GO:0044444,GO:0044464,GO:0045454,GO:0047134,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1990748 - 0.0000000000000000000000000000003465 127.0
BYD3_k127_2170740_36 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.000000000000000000000000000001213 139.0
BYD3_k127_2170740_38 Peptidase M56, BlaR1 - - - 0.00000000000000000000000000006354 126.0
BYD3_k127_2170740_39 - - - - 0.00000000000000000000000000007286 130.0
BYD3_k127_2170740_4 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 GO:0003674,GO:0003824,GO:0004853,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001643 439.0
BYD3_k127_2170740_40 Protein of unknown function (DUF3738) - - - 0.0000000000000000000000000009124 123.0
BYD3_k127_2170740_41 PFAM O-methyltransferase - - - 0.00000000000000000000000003777 115.0
BYD3_k127_2170740_43 - - - - 0.000000000000000000000003463 108.0
BYD3_k127_2170740_44 - K02172 - - 0.0000000000000000000004699 108.0
BYD3_k127_2170740_45 - K02172 - - 0.0000000000000000000006453 107.0
BYD3_k127_2170740_46 Necessary for formate dehydrogenase activity K02380 - - 0.0000000000000000002801 98.0
BYD3_k127_2170740_47 - - - - 0.0000000000000000007594 98.0
BYD3_k127_2170740_48 PFAM Tail Collar domain protein - - - 0.00000000000000000157 95.0
BYD3_k127_2170740_5 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 GO:0000271,GO:0003674,GO:0003824,GO:0004373,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0005977,GO:0005978,GO:0006073,GO:0006091,GO:0006112,GO:0008150,GO:0008152,GO:0008194,GO:0009058,GO:0009059,GO:0009250,GO:0009987,GO:0015980,GO:0016051,GO:0016740,GO:0016757,GO:0016758,GO:0033692,GO:0034637,GO:0034645,GO:0035251,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0046527,GO:0055114,GO:0071704,GO:1901576 2.4.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002958 439.0
BYD3_k127_2170740_51 PFAM phosphoesterase, PA-phosphatase related - - - 0.0000000000000001201 91.0
BYD3_k127_2170740_52 DinB family - - - 0.0000000000000005878 83.0
BYD3_k127_2170740_53 oxidoreductase activity - - - 0.0000000000000006397 91.0
BYD3_k127_2170740_54 DinB family - - - 0.000000000000001176 78.0
BYD3_k127_2170740_55 Belongs to the 'phage' integrase family - - - 0.000000000000002039 89.0
BYD3_k127_2170740_56 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07669,K07672 - - 0.00000000000000449 80.0
BYD3_k127_2170740_57 Protein of unknown function (DUF3738) - - - 0.00000001168 65.0
BYD3_k127_2170740_58 Protein of unknown function (DUF3738) - - - 0.00000001375 63.0
BYD3_k127_2170740_59 Polymer-forming cytoskeletal - - - 0.00000002894 60.0
BYD3_k127_2170740_6 PFAM Peptidase M20 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007568 430.0
BYD3_k127_2170740_60 - - - - 0.00000003257 64.0
BYD3_k127_2170740_61 Histidine kinase K13587 - 2.7.13.3 0.0000002301 59.0
BYD3_k127_2170740_7 6-phosphogluconate dehydrogenase, C-terminal domain K00033 - 1.1.1.343,1.1.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002881 423.0
BYD3_k127_2170740_8 Protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001658 417.0
BYD3_k127_2170740_9 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003005 413.0
BYD3_k127_21969_0 Dehydrogenase K17760 - 1.1.9.1 1.571e-203 646.0
BYD3_k127_21969_1 Protein of unknown function (DUF1800) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004413 570.0
BYD3_k127_21969_2 Protein of unknown function (DUF1501) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001083 484.0
BYD3_k127_21969_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000001905 243.0
BYD3_k127_21969_4 SMP-30/Gluconolaconase/LRE-like region - - - 0.00000000000000000000000000001951 117.0
BYD3_k127_2238008_0 competence protein COMEC - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005419 369.0
BYD3_k127_2238008_1 AraC-like ligand binding domain - - - 0.0000000000000000000000000000000000000000000005432 178.0
BYD3_k127_2238008_2 Cupin 2, conserved barrel domain protein - - - 0.000000000000000000000000000000000000000000001576 167.0
BYD3_k127_2238008_3 - - - - 0.0000000000000000000000000000000000001331 159.0
BYD3_k127_2238008_4 thiolester hydrolase activity K06889 - - 0.000000000000000000000000151 119.0
BYD3_k127_2238008_5 - - - - 0.000000000000000001112 99.0
BYD3_k127_2238008_6 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) - - - 0.0000000000000006033 88.0
BYD3_k127_2238008_7 Glycosyltransferase family 87 K13671 - - 0.0000008168 61.0
BYD3_k127_2238008_8 temperature-gated cation channel activity - - - 0.0007563 48.0
BYD3_k127_2277725_0 Pyridine nucleotide-disulphide oxidoreductase K00362 - 1.7.1.15 0.0 1170.0
BYD3_k127_2277725_1 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00372 - - 0.0 1078.0
BYD3_k127_2277725_2 NMT1-like family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002566 560.0
BYD3_k127_2277725_3 4Fe-4S dicluster domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000165 531.0
BYD3_k127_2277725_4 COG2223 Nitrate nitrite transporter K02575 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000546 441.0
BYD3_k127_2277725_5 Alginate export - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004542 325.0
BYD3_k127_2277725_6 ANTAR K01719 - 4.2.1.75 0.0000000000000000000000000000000000000000000000000000001005 199.0
BYD3_k127_2277725_7 Rieske-like [2Fe-2S] domain K00363 - 1.7.1.15 0.0000000000000000000000000000009437 125.0
BYD3_k127_2284952_0 Carboxypeptidase regulatory-like domain - - - 0.0 1079.0
BYD3_k127_2284952_1 Belongs to the glutaminase family K01425 - 3.5.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002465 441.0
BYD3_k127_2284952_10 phosphinothricin N-acetyltransferase activity K03823 - 2.3.1.183 0.000000000000000000000000000000000000000000000000000000000001876 214.0
BYD3_k127_2284952_11 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.0000000000000000000000000000000000000000000000000000000003993 208.0
BYD3_k127_2284952_12 Belongs to the low molecular weight phosphotyrosine protein phosphatase family K03741 - 1.20.4.1 0.0000000000000000000000000000000000000000000000000000006485 201.0
BYD3_k127_2284952_13 PFAM monooxygenase FAD-binding - - - 0.000000000000000000000000000000000000000000000000003965 196.0
BYD3_k127_2284952_14 DNA-binding transcription factor activity - - - 0.000000000000000000000000000000000000001444 150.0
BYD3_k127_2284952_15 Cupin 2, conserved barrel domain protein - - - 0.00000000000000000000000000000000000003488 154.0
BYD3_k127_2284952_16 DinB family - - - 0.00000000000000000000000000000000000005273 148.0
BYD3_k127_2284952_17 DNA-binding transcription factor activity - - - 0.0000000000000000000000000000000001188 136.0
BYD3_k127_2284952_18 Belongs to the acetyltransferase family. ArgA subfamily K00619 - 2.3.1.1 0.000000000000000000000000000000000219 138.0
BYD3_k127_2284952_19 Protein of unknown function (DUF3738) - - - 0.0000000000000000000000000000004443 135.0
BYD3_k127_2284952_2 Domain of unknown function (DUF4139) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001189 427.0
BYD3_k127_2284952_20 helix_turn_helix, Arsenical Resistance Operon Repressor K03892 - - 0.00000000000000000000003855 104.0
BYD3_k127_2284952_21 - - - - 0.000000000000000000001882 101.0
BYD3_k127_2284952_22 Domain of unknown function (DUF4440) - - - 0.00000000004942 73.0
BYD3_k127_2284952_23 - K02172 - - 0.0000000002409 70.0
BYD3_k127_2284952_24 - - - - 0.0000000009958 67.0
BYD3_k127_2284952_25 - K02172 - - 0.00000007591 57.0
BYD3_k127_2284952_27 - K02172 - - 0.0005026 49.0
BYD3_k127_2284952_3 Cytochrome c K08685 - 1.4.9.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001392 421.0
BYD3_k127_2284952_4 InterPro IPR010496 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003896 398.0
BYD3_k127_2284952_5 carboxylic ester hydrolase activity K00433 - 1.11.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008747 371.0
BYD3_k127_2284952_6 Hypothetical methyltransferase K07755 - 2.1.1.137 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001672 330.0
BYD3_k127_2284952_7 Belongs to the MIP aquaporin (TC 1.A.8) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004025 300.0
BYD3_k127_2284952_8 glyoxalase III activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000006917 264.0
BYD3_k127_2284952_9 PFAM NADPH-dependent FMN reductase K19784 - - 0.0000000000000000000000000000000000000000000000000000000000000001787 225.0
BYD3_k127_2306148_0 Carboxyl transferase domain K01966 - 2.1.3.15,6.4.1.3 2.241e-249 779.0
BYD3_k127_2306148_1 PFAM sigma-54 factor interaction domain-containing protein K02584 - - 1.099e-225 711.0
BYD3_k127_2306148_2 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005487 578.0
BYD3_k127_2306148_3 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003463 427.0
BYD3_k127_2306148_4 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 - 2.2.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001709 286.0
BYD3_k127_2306148_5 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000001218 121.0
BYD3_k127_2306148_6 cellulase activity - - - 0.000000003251 69.0
BYD3_k127_2312301_0 Pyruvate kinase, barrel domain K00873 - 2.7.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001337 610.0
BYD3_k127_2312301_1 Sodium/calcium exchanger protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002021 462.0
BYD3_k127_2312301_10 VIT family - - - 0.0000000000000000000000000000000000000000000000000004174 199.0
BYD3_k127_2312301_11 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.00000000000000000000000000000000000000000000001864 176.0
BYD3_k127_2312301_12 helix_turn_helix, cAMP Regulatory protein K01420 - - 0.00000000000000000000000000000000000000000001351 171.0
BYD3_k127_2312301_13 - - - - 0.000000000000000000000000000000000000001143 154.0
BYD3_k127_2312301_14 Domain of unknown function (DUF4126) - - - 0.000000000000000000000000000000000000003709 163.0
BYD3_k127_2312301_15 Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family K00655 - 2.3.1.51 0.0000000000000000000000000000000000001316 150.0
BYD3_k127_2312301_16 CarD-like/TRCF domain K07736 - - 0.0000000000000000000000005708 109.0
BYD3_k127_2312301_17 cheY-homologous receiver domain - - - 0.000000000000000000001381 100.0
BYD3_k127_2312301_18 Domain of unknown function (DUF4956) - - - 0.00000000000009936 78.0
BYD3_k127_2312301_19 oxidoreductase activity - - - 0.00000000000196 81.0
BYD3_k127_2312301_2 Protein of unknown function (DUF2950) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001155 400.0
BYD3_k127_2312301_20 - - - - 0.00000000135 66.0
BYD3_k127_2312301_21 PFAM response regulator receiver - - - 0.00001984 53.0
BYD3_k127_2312301_3 Sugar (and other) transporter K07552 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001428 396.0
BYD3_k127_2312301_4 Protein of unknown function (DUF3300) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006775 398.0
BYD3_k127_2312301_5 Sugar (and other) transporter K08195 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004258 355.0
BYD3_k127_2312301_6 Histidine kinase K07683 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006099 287.0
BYD3_k127_2312301_7 Calcineurin-like phosphoesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002402 258.0
BYD3_k127_2312301_8 Modulates transcription in response to changes in cellular NADH NAD( ) redox state K01926 GO:0003674,GO:0005488,GO:0005515,GO:0042802 - 0.000000000000000000000000000000000000000000000000000000009199 205.0
BYD3_k127_2312301_9 ) H( ) antiporter that extrudes sodium in exchange for external protons K03313 - - 0.0000000000000000000000000000000000000000000000000000002732 210.0
BYD3_k127_233980_0 radical SAM domain protein - - - 1.712e-279 891.0
BYD3_k127_233980_1 AMP-dependent synthetase and ligase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006665 522.0
BYD3_k127_233980_10 Major Facilitator K08177 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004793 346.0
BYD3_k127_233980_11 response to heat K07090 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002397 338.0
BYD3_k127_233980_12 Phosphate-selective porin O and P K07221 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005785 286.0
BYD3_k127_233980_13 Phosphoadenosine phosphosulfate reductase family K00390 - 1.8.4.10,1.8.4.8 0.000000000000000000000000000000000000000000000000000000000000000000000001847 251.0
BYD3_k127_233980_14 2-Keto-4-pentenoate hydratase - - - 0.0000000000000000000000000000000000000000000000007655 185.0
BYD3_k127_233980_15 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000005641 167.0
BYD3_k127_233980_16 ankyrin repeats - - - 0.00000000004552 66.0
BYD3_k127_233980_2 Sulfate ABC transporter, periplasmic sulfate-binding protein K02048 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001009 498.0
BYD3_k127_233980_3 Phosphoadenosine phosphosulfate reductase family K00957 - 2.7.7.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001675 481.0
BYD3_k127_233980_4 Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN NodQ subfamily K00956 - 2.7.7.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009226 471.0
BYD3_k127_233980_5 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family K03309 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006321 450.0
BYD3_k127_233980_6 Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system K02045 - 3.6.3.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001524 387.0
BYD3_k127_233980_7 sulfate transport system, permease K02047 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001655 385.0
BYD3_k127_233980_8 Binding-protein-dependent transport system inner membrane component K02046 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008888 377.0
BYD3_k127_233980_9 2-dehydropantoate 2-reductase K00077 - 1.1.1.169 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002083 351.0
BYD3_k127_2348235_0 Protein conserved in bacteria K07793 - - 1.657e-218 696.0
BYD3_k127_2348235_1 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004704 425.0
BYD3_k127_2348235_2 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004205 359.0
BYD3_k127_2348235_3 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001378 255.0
BYD3_k127_2348235_4 Cupin domain - - - 0.00000000000000000000000000000000000000000000000000000000002884 222.0
BYD3_k127_2348235_5 Tripartite tricarboxylate transporter TctB family - - - 0.0000000000000000000000000009907 120.0
BYD3_k127_2348235_6 - - - - 0.0001348 45.0
BYD3_k127_2364472_0 ATPase with chaperone activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000168 424.0
BYD3_k127_2364472_1 Type II secretory pathway component ExeA K02450 - - 0.00000000000000000000000000000000000000000000000008469 196.0
BYD3_k127_2364472_2 Flp pilus assembly protein TadC K12511 - - 0.0000000000000004805 89.0
BYD3_k127_2384091_0 PFAM carboxyl transferase K01969,K15052 - 2.1.3.15,6.4.1.3,6.4.1.4 1.093e-238 745.0
BYD3_k127_2384091_1 CoA carboxylase activity K01968 - 6.4.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004311 499.0
BYD3_k127_2384091_2 Pfam Uncharacterised protein family UPF0047 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002823 338.0
BYD3_k127_2384091_3 Ferritin-like domain K03594 - 1.16.3.1 0.000000000000000000000000000000000000000000000000000000000000003073 220.0
BYD3_k127_2384091_4 Helix-hairpin-helix domain K04477 - - 0.0000000000000000000000000000000000000000000001945 181.0
BYD3_k127_2384091_5 - - - - 0.00000000000000000000000003429 121.0
BYD3_k127_2384091_6 Acetyl propionyl-CoA carboxylase alpha subunit K01968 - 6.4.1.4 0.0000000000000007282 83.0
BYD3_k127_2384091_7 Riboflavin biosynthesis K00082 - 1.1.1.193 0.0000000001235 72.0
BYD3_k127_2386219_0 peptidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001077 379.0
BYD3_k127_2386219_1 serine-type peptidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002327 370.0
BYD3_k127_2386219_10 glyoxalase bleomycin resistance protein dioxygenase - - - 0.0000007079 57.0
BYD3_k127_2386219_11 - - - - 0.00000599 56.0
BYD3_k127_2386219_12 tRNA (guanine(37)-N(1))-methyltransferase activity K15429 - 2.1.1.228 0.00005769 54.0
BYD3_k127_2386219_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005615 268.0
BYD3_k127_2386219_3 Glycosyl transferase, family 2 K00721 - 2.4.1.83 0.00000000000000000000000000000000000000000000000000000000000000000001067 240.0
BYD3_k127_2386219_4 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000001479 231.0
BYD3_k127_2386219_6 Pfam:DUF2029 - - - 0.000000000000002198 90.0
BYD3_k127_2386219_7 Major Facilitator Superfamily - - - 0.0000000000001308 82.0
BYD3_k127_2386219_8 acetyltransferase K06975 - - 0.0000000000009652 72.0
BYD3_k127_2386219_9 - - - - 0.0000000013 67.0
BYD3_k127_2390670_0 DNA methylase K00571 - 2.1.1.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007313 325.0
BYD3_k127_2390670_1 - - - - 0.0000000000000000000000000000000000004155 145.0
BYD3_k127_2390670_2 COG0457 FOG TPR repeat - - - 0.000000000000000000000001984 107.0
BYD3_k127_2390670_3 Zinc-binding dehydrogenase - - - 0.0000000000000001142 83.0
BYD3_k127_2405675_0 Cystathionine beta-synthase K01697 - 4.2.1.22 2.887e-195 619.0
BYD3_k127_2405675_1 COG0574 Phosphoenolpyruvate synthase pyruvate phosphate dikinase K01007,K21787 GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016740,GO:0016999,GO:0017000,GO:0017144,GO:0044237,GO:0044249 2.7.9.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000387 571.0
BYD3_k127_2405675_10 Domain of unknown function (DUF4159) - - - 0.0000000000000000000000000000000000000000000000000000000000000008417 228.0
BYD3_k127_2405675_11 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.00000000000000000000000000000000000000000000000000000000001223 212.0
BYD3_k127_2405675_12 Domain of unknown function (DUF4159) - - - 0.0000000000000000000000000000000000000000000000000000000003109 214.0
BYD3_k127_2405675_13 Belongs to the CDS family K00981,K19664 GO:0003674,GO:0003824,GO:0004605,GO:0005575,GO:0006139,GO:0006220,GO:0006221,GO:0006629,GO:0006644,GO:0006650,GO:0006655,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009117,GO:0009165,GO:0009987,GO:0016020,GO:0016024,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044271,GO:0044281,GO:0045017,GO:0046341,GO:0046471,GO:0046474,GO:0046483,GO:0046486,GO:0055086,GO:0070567,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.7.41,2.7.7.67 0.000000000000000000000000000000000000000009214 164.0
BYD3_k127_2405675_14 Transcriptional regulatory protein, C terminal - - - 0.0000000000000000000000000000000000009514 159.0
BYD3_k127_2405675_15 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000418 145.0
BYD3_k127_2405675_16 nuclear chromosome segregation - - - 0.0000000000000000000000000000000006801 146.0
BYD3_k127_2405675_17 AAA-4 family - - - 0.000000000000000000000000000009178 130.0
BYD3_k127_2405675_18 unsaturated fatty acid biosynthetic process - - - 0.0000000000000000000000000003894 125.0
BYD3_k127_2405675_19 Domain of unknown function (DUF4252) - - - 0.0000000000000000000000001537 112.0
BYD3_k127_2405675_2 Protein of unknown function (DUF3500) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001756 524.0
BYD3_k127_2405675_20 Acyl-transferase K00655,K07003,K15781 GO:0003674,GO:0003824,GO:0003841,GO:0005575,GO:0005623,GO:0005886,GO:0006629,GO:0006644,GO:0006650,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008374,GO:0008610,GO:0008654,GO:0009058,GO:0009987,GO:0016020,GO:0016411,GO:0016740,GO:0016746,GO:0016747,GO:0019637,GO:0042171,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044464,GO:0045017,GO:0046474,GO:0046486,GO:0071617,GO:0071704,GO:0071944,GO:0090407,GO:1901576 2.3.1.51,3.1.3.3 0.000000000000000006307 98.0
BYD3_k127_2405675_22 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 GO:0003674,GO:0003824,GO:0003882,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006629,GO:0006644,GO:0006650,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009987,GO:0016020,GO:0016740,GO:0016772,GO:0016780,GO:0017169,GO:0019637,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044464,GO:0045017,GO:0046474,GO:0046486,GO:0071704,GO:0071944,GO:0090407,GO:1901576 2.7.8.8 0.000000000000001441 84.0
BYD3_k127_2405675_23 - - - - 0.00000000000001657 84.0
BYD3_k127_2405675_24 response to abiotic stimulus K06867 - - 0.000000000001839 74.0
BYD3_k127_2405675_25 - - - - 0.0000004058 55.0
BYD3_k127_2405675_26 oxidoreductase activity - - - 0.0000004748 63.0
BYD3_k127_2405675_3 CotH kinase protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001673 507.0
BYD3_k127_2405675_4 AMP-dependent synthetase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006312 497.0
BYD3_k127_2405675_5 fatty-acyl-CoA reductase (alcohol-forming) activity K01007,K18845 - 2.1.1.179,2.7.9.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002317 481.0
BYD3_k127_2405675_6 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001928 402.0
BYD3_k127_2405675_7 5'-nucleotidase, C-terminal domain K01081 - 3.1.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003028 374.0
BYD3_k127_2405675_8 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004717 327.0
BYD3_k127_2405675_9 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004781 267.0
BYD3_k127_2411029_0 O-methyltransferase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002779 541.0
BYD3_k127_2411029_1 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02483,K07660 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001437 300.0
BYD3_k127_2411029_10 - - - - 0.00000000000000000000000000000000000002531 157.0
BYD3_k127_2411029_11 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.0000000000000000000000000000000000003318 161.0
BYD3_k127_2411029_13 TIGRFAM HAD-superfamily hydrolase, subfamily IA, variant 1 K01091 - 3.1.3.18 0.00000000000000000000000000001301 132.0
BYD3_k127_2411029_14 Carboxypeptidase regulatory-like domain - - - 0.0000000000000000000000001484 124.0
BYD3_k127_2411029_15 - - - - 0.000000000003282 73.0
BYD3_k127_2411029_16 ubiE/COQ5 methyltransferase family - - - 0.000000000453 72.0
BYD3_k127_2411029_18 - - - - 0.000000005078 66.0
BYD3_k127_2411029_19 - - - - 0.000001125 62.0
BYD3_k127_2411029_2 Dihydrodipicolinate reductase, N-terminus K21672 - 1.4.1.12,1.4.1.26 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004753 301.0
BYD3_k127_2411029_20 Alpha/beta hydrolase family - - - 0.000156 51.0
BYD3_k127_2411029_22 Protein of unknown function (DUF3738) - - - 0.0005401 43.0
BYD3_k127_2411029_3 PFAM alpha beta hydrolase fold K01561 - 3.8.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001397 297.0
BYD3_k127_2411029_4 COG0642 Signal transduction histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000005421 239.0
BYD3_k127_2411029_5 Methylenetetrahydrofolate reductase K00297 - 1.5.1.20 0.000000000000000000000000000000000000000000000000000000000000001237 228.0
BYD3_k127_2411029_6 FR47-like protein K03823 - 2.3.1.183 0.0000000000000000000000000000000000000000000000000000000000101 211.0
BYD3_k127_2411029_7 Domain of unknown function (DUF4159) - - - 0.00000000000000000000000000000000000000000000000001597 194.0
BYD3_k127_2411029_8 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell K03282 - - 0.0000000000000000000000000000000000000000000001991 171.0
BYD3_k127_2411029_9 - - - - 0.000000000000000000000000000000000000001119 160.0
BYD3_k127_2442535_0 Belongs to the DNA polymerase type-C family. DnaE2 subfamily K14162 - 2.7.7.7 1e-323 1018.0
BYD3_k127_2442535_1 Transmembrane secretion effector - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000285 351.0
BYD3_k127_2442535_2 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K14161 - - 0.00000000000000000000000000000000000000000000000000000000000003385 232.0
BYD3_k127_2442535_3 Histidine kinase - - - 0.000000000000000472 83.0
BYD3_k127_2442535_4 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006310,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360 - 0.00000001794 65.0
BYD3_k127_2612123_0 lysine biosynthetic process via aminoadipic acid - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001766 416.0
BYD3_k127_2612123_1 PFAM Alcohol dehydrogenase GroES-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002126 335.0
BYD3_k127_2612123_10 Regulator of nitric oxide reductase transcription K19339 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000562 70.0
BYD3_k127_2612123_11 Quinohemoprotein amine dehydrogenase K08685 - 1.4.9.1 0.00001885 53.0
BYD3_k127_2612123_12 Protein of unknown function (DUF1552) - - - 0.0001499 45.0
BYD3_k127_2612123_2 Cardiolipin synthetase K06131 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001964 322.0
BYD3_k127_2612123_3 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003444 310.0
BYD3_k127_2612123_4 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003564 306.0
BYD3_k127_2612123_5 Ankyrin repeats (many copies) - - - 0.00000000000000000000000000000000000000000000000000000003954 220.0
BYD3_k127_2612123_6 PFAM cytochrome c oxidase, subunit III K02276 - 1.9.3.1 0.00000000000000000000000000005311 118.0
BYD3_k127_2612123_7 FMN_bind K19339 - - 0.000000000000000000000000000123 131.0
BYD3_k127_2612123_8 Cro/C1-type HTH DNA-binding domain K07727 - - 0.00000000000000000000000003399 110.0
BYD3_k127_2612123_9 TIGRFAM Caa(3)-type oxidase, subunit IV K02277 - 1.9.3.1 0.0000000000000000007929 92.0
BYD3_k127_2661676_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07788 - - 0.0 1204.0
BYD3_k127_2661676_1 DNA topological change K03168 - 5.99.1.2 6.224e-221 712.0
BYD3_k127_2661676_10 Domain of unknown function (DU1801) - - - 0.000000000000000000000000000000000000000000000000000000003157 211.0
BYD3_k127_2661676_11 Putative esterase - - - 0.000000000000000000000000000000000000000000000000001387 196.0
BYD3_k127_2661676_12 Phospholipid methyltransferase - - - 0.00000000000000000000000000000000000000000000000000979 194.0
BYD3_k127_2661676_13 PIN domain - - - 0.00000000000000000000000000000000000000000005376 163.0
BYD3_k127_2661676_14 - - - - 0.000000000000000000000000000000000000000004141 166.0
BYD3_k127_2661676_15 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000000000000000000000000002138 154.0
BYD3_k127_2661676_16 Cupin 2, conserved barrel domain protein - - - 0.00000000000000000000000000000000000006528 144.0
BYD3_k127_2661676_17 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000003999 150.0
BYD3_k127_2661676_18 Protein of unknown function (DUF3738) - - - 0.0000000000000000000000000000000001122 143.0
BYD3_k127_2661676_19 Bacterial PH domain - - - 0.000000000000000000000000000004547 125.0
BYD3_k127_2661676_2 Amidase K01426 - 3.5.1.4 9.93e-215 677.0
BYD3_k127_2661676_20 ASCH - - - 0.00000000000000000000000000005311 118.0
BYD3_k127_2661676_21 Domain of unknown function (DU1801) - - - 0.00000000000000000006039 99.0
BYD3_k127_2661676_22 Belongs to the ClpA ClpB family K03696 - - 0.0000000000000007958 86.0
BYD3_k127_2661676_23 lactoylglutathione lyase activity K01759 - 4.4.1.5 0.000000000000001176 87.0
BYD3_k127_2661676_24 lactoylglutathione lyase activity K01759 - 4.4.1.5 0.000000000000007018 85.0
BYD3_k127_2661676_25 PFAM PBS lyase HEAT domain protein - - - 0.000000000002813 76.0
BYD3_k127_2661676_26 Bacterial regulatory proteins, gntR family K00375 - - 0.00000000003089 70.0
BYD3_k127_2661676_27 response to abiotic stimulus K06867 - - 0.00000000004367 72.0
BYD3_k127_2661676_28 Antitoxin component of a toxin-antitoxin (TA) module - - - 0.00000006482 59.0
BYD3_k127_2661676_29 Antibiotic biosynthesis monooxygenase - - - 0.0000001228 61.0
BYD3_k127_2661676_3 COG2133 Glucose sorbosone dehydrogenases K21430 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006276 484.0
BYD3_k127_2661676_30 CAAX protease self-immunity K07052 - - 0.00001132 56.0
BYD3_k127_2661676_31 - - - - 0.00001744 53.0
BYD3_k127_2661676_4 Helix-hairpin-helix class 2 (Pol1 family) motifs - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002302 413.0
BYD3_k127_2661676_5 Putative cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003178 400.0
BYD3_k127_2661676_6 Protein of unknown function (DUF1552) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003731 355.0
BYD3_k127_2661676_7 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity K00303 - 1.5.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001127 330.0
BYD3_k127_2661676_8 Biotin-lipoyl like K07799 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005197 329.0
BYD3_k127_2661676_9 response to abiotic stimulus K06867 - - 0.0000000000000000000000000000000000000000000000000000000000000001541 251.0
BYD3_k127_2675080_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 0.0 1090.0
BYD3_k127_2675080_1 Dehydrogenase K00117 - 1.1.5.2 5.485e-277 870.0
BYD3_k127_2675080_10 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004676 427.0
BYD3_k127_2675080_11 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001065 431.0
BYD3_k127_2675080_12 PFAM pfkB family carbohydrate kinase K00847,K00856 - 2.7.1.20,2.7.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009568 402.0
BYD3_k127_2675080_13 Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S- adenosylmethionine. Has broad substrate specificity with 6- aminopurine nucleosides as preferred substrates K00772 - 2.4.2.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001067 398.0
BYD3_k127_2675080_14 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001876 404.0
BYD3_k127_2675080_15 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006101 369.0
BYD3_k127_2675080_16 TIGRFAM Lipoprotein releasing system, transmembrane protein, LolC E family K09808 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006308 330.0
BYD3_k127_2675080_17 Peptidase S46 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004029 323.0
BYD3_k127_2675080_18 Peptidase S46 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001033 325.0
BYD3_k127_2675080_19 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003634 317.0
BYD3_k127_2675080_2 Heat shock 70 kDa protein K04043 - - 1.073e-261 820.0
BYD3_k127_2675080_20 GTPase activity K07588 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007079 301.0
BYD3_k127_2675080_21 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004998 300.0
BYD3_k127_2675080_22 6-phosphogluconate dehydrogenase, NAD-binding K00020,K00042 - 1.1.1.31,1.1.1.60 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002348 295.0
BYD3_k127_2675080_23 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001317 279.0
BYD3_k127_2675080_24 Involved in the biosynthesis of porphyrin-containing compound - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008165 283.0
BYD3_k127_2675080_25 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278,K00767 - 1.4.3.16,2.4.2.19 0.00000000000000000000000000000000000000000000000000000000000000000000003301 253.0
BYD3_k127_2675080_26 aminopeptidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000006112 264.0
BYD3_k127_2675080_27 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000002197 248.0
BYD3_k127_2675080_28 Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner K09810 - - 0.00000000000000000000000000000000000000000000000000000000000000000005254 240.0
BYD3_k127_2675080_29 Domain of Unknown Function (DUF1206) - - - 0.0000000000000000000000000000000000000000000000000004863 193.0
BYD3_k127_2675080_3 Methylmalonyl-CoA mutase K01848 - 5.4.99.2 2.421e-222 704.0
BYD3_k127_2675080_30 Cobalamin B12-binding K01849 - 5.4.99.2 0.0000000000000000000000000000000000000000000000000005774 187.0
BYD3_k127_2675080_31 PFAM Histidine triad (HIT) protein K19710 - 2.7.7.53 0.00000000000000000000000000000000000000000000000000646 185.0
BYD3_k127_2675080_32 Ribosomal protein S1 K02945 - - 0.00000000000000000000000000000000000000000000000001014 186.0
BYD3_k127_2675080_33 von Willebrand factor (vWF) type A domain K07114 - - 0.00000000000000000000000000000000000000000000003138 183.0
BYD3_k127_2675080_34 Peptidase C26 K07010 - - 0.0000000000000000000000000000000000000000000001326 176.0
BYD3_k127_2675080_35 - - - - 0.00000000000000000000000000000000000000000000025 171.0
BYD3_k127_2675080_36 IstB-like ATP binding protein K02315 - - 0.0000000000000000000000000000000000000000000004992 177.0
BYD3_k127_2675080_37 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 - 2.5.1.78 0.00000000000000000000000000000000000000000002655 167.0
BYD3_k127_2675080_38 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 - 2.1.1.190 0.00000000000000000000000000000000000000000003012 178.0
BYD3_k127_2675080_39 Belongs to the UPF0311 family - - - 0.0000000000000000000000000000000000000000000359 167.0
BYD3_k127_2675080_4 Transglycosylase K05366 GO:0000270,GO:0003674,GO:0003824,GO:0004180,GO:0004185,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006022,GO:0006023,GO:0006024,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0008238,GO:0008360,GO:0008658,GO:0008955,GO:0009002,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016020,GO:0016021,GO:0016740,GO:0016757,GO:0016758,GO:0016787,GO:0017171,GO:0019538,GO:0022603,GO:0022604,GO:0030203,GO:0031224,GO:0031226,GO:0031406,GO:0033218,GO:0033293,GO:0034645,GO:0036094,GO:0042221,GO:0042546,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044425,GO:0044459,GO:0044464,GO:0046677,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051128,GO:0065007,GO:0065008,GO:0070008,GO:0070011,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:0071944,GO:0097159,GO:0140096,GO:1901135,GO:1901137,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901681 2.4.1.129,3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008019 589.0
BYD3_k127_2675080_40 - - - - 0.00000000000000000000000000000000000000001748 168.0
BYD3_k127_2675080_41 Transcriptional regulator, MerR family K13640 GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 - 0.0000000000000000000000000000000000000001228 156.0
BYD3_k127_2675080_42 Glyoxalase-like domain K01759,K05606 - 4.4.1.5,5.1.99.1 0.000000000000000000000000000000000002367 153.0
BYD3_k127_2675080_43 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K05788 - - 0.000000000000000000000000000000000009102 139.0
BYD3_k127_2675080_44 Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor K03524 - 6.3.4.15 0.00000000000000000000000000000000001943 154.0
BYD3_k127_2675080_45 cheY-homologous receiver domain - - - 0.00000000000000000000000000000001043 141.0
BYD3_k127_2675080_46 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000000000000000000000001253 129.0
BYD3_k127_2675080_47 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.000000000000000000000000001926 117.0
BYD3_k127_2675080_48 Tetratricopeptide repeat - - - 0.0000000000000000000001304 113.0
BYD3_k127_2675080_49 oxidoreductase activity - - - 0.0000000000000000004612 102.0
BYD3_k127_2675080_5 Belongs to the class-I aminoacyl-tRNA synthetase family K01887 - 6.1.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002033 581.0
BYD3_k127_2675080_50 - - - - 0.000000000000000008389 95.0
BYD3_k127_2675080_51 Antibiotic biosynthesis monooxygenase K11530 - 5.3.1.32 0.00000000000000669 78.0
BYD3_k127_2675080_52 Acyl-CoA dehydrogenase, C-terminal domain K00249 - 1.3.8.7 0.00000000000001325 85.0
BYD3_k127_2675080_53 - - - - 0.00000000001202 72.0
BYD3_k127_2675080_54 23S rRNA-intervening sequence protein - - - 0.00000000008223 73.0
BYD3_k127_2675080_55 Predicted membrane protein (DUF2085) - - - 0.000000001134 65.0
BYD3_k127_2675080_56 Tetratricopeptide repeat - - - 0.000001326 61.0
BYD3_k127_2675080_57 Belongs to the ClpA ClpB family K03696 - - 0.000003682 48.0
BYD3_k127_2675080_58 - - - - 0.000004617 50.0
BYD3_k127_2675080_59 PFAM Sporulation K03749 - - 0.0000471 53.0
BYD3_k127_2675080_6 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase K00261 - 1.4.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003396 555.0
BYD3_k127_2675080_60 outer membrane autotransporter barrel domain protein - - - 0.000715 50.0
BYD3_k127_2675080_7 tRNA synthetases class II (D, K and N) K04567 - 6.1.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006039 552.0
BYD3_k127_2675080_8 Acyl-CoA dehydrogenase, C-terminal domain K00248 - 1.3.8.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005159 520.0
BYD3_k127_2675080_9 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003124 470.0
BYD3_k127_2678530_0 peptidoglycan glycosyltransferase activity K03588,K05364,K05837 GO:0002682,GO:0002684,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0009605,GO:0009607,GO:0009987,GO:0035821,GO:0043207,GO:0044003,GO:0044403,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0048518,GO:0048583,GO:0048584,GO:0050776,GO:0050778,GO:0050789,GO:0050896,GO:0051301,GO:0051701,GO:0051704,GO:0051707,GO:0051817,GO:0052031,GO:0052173,GO:0052200,GO:0052255,GO:0052552,GO:0052553,GO:0052555,GO:0052556,GO:0052564,GO:0052572,GO:0065007,GO:0075136 - 3.52e-234 768.0
BYD3_k127_2678530_1 protein phosphatase 2C domain protein K20074 - 3.1.3.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009988 360.0
BYD3_k127_2678530_2 protein kinase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005271 370.0
BYD3_k127_2678530_3 histone H2A K63-linked ubiquitination K01768,K03220,K10914 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000005604 210.0
BYD3_k127_2678530_4 Transcriptional regulatory protein, C terminal - - - 0.00000000000000003286 91.0
BYD3_k127_2678530_5 histone H2A K63-linked ubiquitination K02283 - - 0.00000000001654 75.0
BYD3_k127_2699061_0 Maltogenic Amylase, C-terminal domain K05343 - 3.2.1.1,5.4.99.16 1.873e-196 635.0
BYD3_k127_2699061_1 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000234 614.0
BYD3_k127_2699061_10 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0005488,GO:0097159,GO:1901363 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006381 295.0
BYD3_k127_2699061_11 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000007197 274.0
BYD3_k127_2699061_12 PFAM Uncharacterised ACR, YagE family COG1723 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000914 249.0
BYD3_k127_2699061_13 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000139 242.0
BYD3_k127_2699061_14 - K02172 - - 0.000000000000000000000000000000000000000000000000000002188 203.0
BYD3_k127_2699061_15 TonB-dependent receptor K02014 - - 0.00000000000000000000000000000000000000000000000004161 203.0
BYD3_k127_2699061_16 protein conserved in bacteria - - - 0.00000000000000000000000000000000000005493 148.0
BYD3_k127_2699061_17 Peptidase M56, BlaR1 - - - 0.0000000000000000000000000000001239 136.0
BYD3_k127_2699061_18 Peptidase M56, BlaR1 - - - 0.000000000000000000000001116 113.0
BYD3_k127_2699061_19 Dual specificity phosphatase, catalytic domain - - - 0.000000000000000000000007085 111.0
BYD3_k127_2699061_2 KaiC K08482 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005221 526.0
BYD3_k127_2699061_20 PFAM Mg2 transporter protein CorA family protein K16074 - - 0.00000000000000000003046 94.0
BYD3_k127_2699061_21 - - - - 0.0000000000000002613 84.0
BYD3_k127_2699061_22 PFAM CHAD domain containing protein - - - 0.0000000000008301 79.0
BYD3_k127_2699061_23 - - - - 0.00000006376 64.0
BYD3_k127_2699061_25 - - - - 0.00000257 50.0
BYD3_k127_2699061_27 general secretion pathway protein - - - 0.000006792 48.0
BYD3_k127_2699061_28 Protein of unknown function (DUF2934) - - - 0.00001565 51.0
BYD3_k127_2699061_3 metallophosphoesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005625 516.0
BYD3_k127_2699061_4 phosphatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000137 511.0
BYD3_k127_2699061_5 Glycerophosphoryl diester phosphodiesterase family K01126 - 3.1.4.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009364 501.0
BYD3_k127_2699061_6 TonB-dependent receptor K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005525 374.0
BYD3_k127_2699061_7 Esterase-like activity of phytase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001854 353.0
BYD3_k127_2699061_8 Ppx GppA phosphatase family K01524 - 3.6.1.11,3.6.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001173 346.0
BYD3_k127_2699061_9 COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001041 320.0
BYD3_k127_2700365_0 Protein of unknown function (DUF1587) - - - 2.999e-221 723.0
BYD3_k127_2700365_1 - - - - 2.145e-206 669.0
BYD3_k127_2700365_10 Divalent cation transporter - - - 0.0000000000000000000000000000000000000000000000000000000007128 213.0
BYD3_k127_2700365_11 - - - - 0.000000000000000000000000000000000000000000000000000000001516 221.0
BYD3_k127_2700365_12 TonB-dependent receptor - - - 0.00000000000000000000000000000000000000000000000000009933 213.0
BYD3_k127_2700365_13 Belongs to the ClpA ClpB family K03696 - - 0.000000000000000000000000000000000000000000000002248 184.0
BYD3_k127_2700365_14 Mycothiol maleylpyruvate isomerase N-terminal domain - - - 0.00000000000000000000000000000000000000000001854 173.0
BYD3_k127_2700365_15 MEDS: MEthanogen/methylotroph, DcmR Sensory domain - - - 0.000000000000000000000000000000000000000003858 168.0
BYD3_k127_2700365_16 Peptidase M56, BlaR1 - - - 0.00000000000000000000000000000000000000003335 161.0
BYD3_k127_2700365_17 lactoylglutathione lyase activity - - - 0.0000000000000000000000000000002693 126.0
BYD3_k127_2700365_18 GCN5 family acetyltransferase - - - 0.0000000000000000000000000000003682 128.0
BYD3_k127_2700365_19 ioli protein K06606 - 5.3.99.11 0.000000000000000000000000000002713 132.0
BYD3_k127_2700365_2 Protein of unknown function (DUF1552) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004101 514.0
BYD3_k127_2700365_20 - - - - 0.0000000000000000000000000001804 129.0
BYD3_k127_2700365_21 negative regulation of transcription, DNA-templated - - - 0.00000000000000000003915 93.0
BYD3_k127_2700365_22 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000000000000000009013 91.0
BYD3_k127_2700365_23 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) - - - 0.00000000000000002149 93.0
BYD3_k127_2700365_24 - - - - 0.00000000000000005264 94.0
BYD3_k127_2700365_25 Gram-negative bacterial TonB protein C-terminal K03832 - - 0.0000000000000002465 90.0
BYD3_k127_2700365_27 - - - - 0.000000000004038 72.0
BYD3_k127_2700365_28 Gram-negative bacterial TonB protein C-terminal K03832 - - 0.00000000000584 76.0
BYD3_k127_2700365_29 membrane protein domain - - - 0.00000000002049 74.0
BYD3_k127_2700365_3 PQQ-like domain K00114 - 1.1.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005341 500.0
BYD3_k127_2700365_30 Cytochrome C oxidase, cbb3-type, subunit III K00406 - - 0.00000000009955 73.0
BYD3_k127_2700365_31 - - - - 0.000000004663 68.0
BYD3_k127_2700365_32 TIGRFAM TonB K03832 - - 0.00000002145 64.0
BYD3_k127_2700365_33 Domain of unknown function (DUF4440) - - - 0.0000001509 57.0
BYD3_k127_2700365_34 energy transducer activity K03832 - - 0.000001531 59.0
BYD3_k127_2700365_35 Cna B domain protein - - - 0.0000095 55.0
BYD3_k127_2700365_4 ankyrin repeat K15503 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004296 463.0
BYD3_k127_2700365_5 cobalamin-transporting ATPase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001152 317.0
BYD3_k127_2700365_6 NHL repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002797 285.0
BYD3_k127_2700365_7 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001544 242.0
BYD3_k127_2700365_8 Nodulation protein S (NodS) - - - 0.0000000000000000000000000000000000000000000000000000000000000001917 226.0
BYD3_k127_2700365_9 glycosyl transferase, family 2 - - - 0.0000000000000000000000000000000000000000000000000000000003897 210.0
BYD3_k127_2722414_0 WD40 domain protein beta Propeller K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007081 615.0
BYD3_k127_2722414_1 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008292 609.0
BYD3_k127_2722414_10 Beta-lactamase K01286 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000007996 254.0
BYD3_k127_2722414_11 haloacid dehalogenase-like hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000002811 231.0
BYD3_k127_2722414_12 Carboxypeptidase regulatory-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000001624 249.0
BYD3_k127_2722414_14 ROK family K00886 - 2.7.1.63 0.0000000000000000000000000000000000000000000000000000000000000009005 227.0
BYD3_k127_2722414_15 membrane - - - 0.000000000000000000000000000000000000000000000000000000000000002157 226.0
BYD3_k127_2722414_16 Sucrose-6F-phosphate phosphohydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000003224 223.0
BYD3_k127_2722414_18 PFAM Binding-protein-dependent transport system inner membrane component K02034 - - 0.00000000000000000000000000000000000000000000000000000000007706 216.0
BYD3_k127_2722414_19 response to abiotic stimulus K06867 - - 0.0000000000000000000000000000000000000000000000000000000001533 212.0
BYD3_k127_2722414_2 MacB-like periplasmic core domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002092 585.0
BYD3_k127_2722414_20 PFAM peptidase S8 and S53, subtilisin, kexin, sedolisin - - - 0.00000000000000000000000000000000000000000000000000000000565 221.0
BYD3_k127_2722414_21 COG1680 Beta-lactamase class C and other penicillin binding proteins - - - 0.00000000000000000000000000000000000000000000000001953 198.0
BYD3_k127_2722414_22 Glucose / Sorbosone dehydrogenase - - - 0.000000000000000000000000000000000000000000001323 173.0
BYD3_k127_2722414_23 PFAM binding-protein-dependent transport systems inner membrane component K02033 - - 0.00000000000000000000000000000000000000000000192 178.0
BYD3_k127_2722414_24 negative regulation of transcription, DNA-templated - - - 0.00000000000000000000000000000000000000004277 155.0
BYD3_k127_2722414_25 negative regulation of transcription, DNA-templated - - - 0.00000000000000000000000000000007551 128.0
BYD3_k127_2722414_26 - K02172 - - 0.00000000000000000000000000003128 130.0
BYD3_k127_2722414_27 Cytochrome P460 - - - 0.00000000000000000000000006011 115.0
BYD3_k127_2722414_28 - K02172 - - 0.0000000000000000000001835 108.0
BYD3_k127_2722414_29 - K02172 - - 0.00000000000000001722 93.0
BYD3_k127_2722414_3 extracellular solute-binding protein, family 5 K02035 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005641 345.0
BYD3_k127_2722414_30 Fibronectin type III domain - - - 0.0000000000001141 82.0
BYD3_k127_2722414_31 Acetyltransferase (GNAT) domain - - - 0.000000000159 68.0
BYD3_k127_2722414_32 Na( ) H( ) antiporter that extrudes sodium in exchange for external protons K03313 - - 0.00000001446 60.0
BYD3_k127_2722414_33 Protein of unknown function (DUF3738) - - - 0.00000002131 60.0
BYD3_k127_2722414_34 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000002835 59.0
BYD3_k127_2722414_35 ) H( ) antiporter that extrudes sodium in exchange for external protons K03313 - - 0.0001283 47.0
BYD3_k127_2722414_36 Transcriptional regulator - - - 0.0001458 53.0
BYD3_k127_2722414_37 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K07709 - 2.7.13.3 0.0001866 53.0
BYD3_k127_2722414_4 Peptidase M56, BlaR1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008391 334.0
BYD3_k127_2722414_5 AI-2E family transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001651 307.0
BYD3_k127_2722414_6 Amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002553 302.0
BYD3_k127_2722414_7 protein deglycation K18199 - 4.2.1.103 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002944 288.0
BYD3_k127_2722414_8 HD domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000218 304.0
BYD3_k127_2722414_9 Putative esterase K07214 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000743 279.0
BYD3_k127_2766946_0 Belongs to the thiolase family K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003482 488.0
BYD3_k127_2774197_0 Penicillin-binding protein, dimerisation domain K05515 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001429 375.0
BYD3_k127_2774197_1 cell shape determining protein MreB K03569 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001807 324.0
BYD3_k127_2774197_2 Cell shape-determining protein MreC K03570 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0007163,GO:0008150,GO:0008360,GO:0009273,GO:0009987,GO:0016020,GO:0016021,GO:0022603,GO:0022604,GO:0030428,GO:0031224,GO:0031226,GO:0042546,GO:0043621,GO:0044085,GO:0044425,GO:0044459,GO:0044464,GO:0050789,GO:0050793,GO:0050794,GO:0051128,GO:0065007,GO:0065008,GO:0071554,GO:0071840,GO:0071944,GO:0071963 - 0.0000000000000000000000000000000000001587 152.0
BYD3_k127_2774197_3 shape-determining protein MreD K03571 - - 0.000009641 54.0
BYD3_k127_2784811_0 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009384 464.0
BYD3_k127_2784811_1 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000234 408.0
BYD3_k127_2784811_2 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072,K12257 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008150,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0033036,GO:0042886,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000235 291.0
BYD3_k127_2784811_3 Preprotein translocase, YajC K03210 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0031522,GO:0032991,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.000000000000000003785 89.0
BYD3_k127_2784811_4 peptidyl-tyrosine sulfation - - - 0.00000000000000001589 95.0
BYD3_k127_2792467_0 Permease family K06901 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005216 351.0
BYD3_k127_2792467_1 HI0933-like protein K07007 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006754 325.0
BYD3_k127_2792467_2 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 GO:0003674,GO:0003824,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016491,GO:0016725,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046429,GO:0046490,GO:0052592,GO:0055114,GO:0071704,GO:0090407,GO:1901135,GO:1901576 1.17.7.1,1.17.7.3 0.0000000000000000000000000000000000000000000000000000000000001948 220.0
BYD3_k127_2792467_3 von Willebrand factor, type A - - - 0.0000000000000000000000000000000000000000000000000000292 199.0
BYD3_k127_2792467_4 Cellulose biosynthesis protein BcsQ K03496 GO:0008150,GO:0022603,GO:0042173,GO:0042174,GO:0043937,GO:0043939,GO:0045595,GO:0045596,GO:0048519,GO:0048523,GO:0050789,GO:0050793,GO:0050794,GO:0051093,GO:0065007 - 0.0000000000000000000000000000000000000000001789 168.0
BYD3_k127_2792467_5 Sortase family K07284 - 3.4.22.70 0.000000000000000000000000000000000000003409 154.0
BYD3_k127_2792467_6 Tellurite resistance protein TehB - - - 0.00000000000000000000000000000000001782 142.0
BYD3_k127_2792467_7 general stress protein - - - 0.00000000000000000008105 95.0
BYD3_k127_2792467_8 Polymer-forming cytoskeletal - - - 0.0000000000000000001476 92.0
BYD3_k127_2792467_9 - - - - 0.000000000007001 75.0
BYD3_k127_2794079_0 Phosphate acyltransferases K05939 - 2.3.1.40,6.2.1.20 0.0 1198.0
BYD3_k127_2794079_1 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 3.676e-289 901.0
BYD3_k127_2794079_10 GDSL-like Lipase/Acylhydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005267 373.0
BYD3_k127_2794079_11 Parallel beta-helix repeats - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002739 371.0
BYD3_k127_2794079_12 hydrolase activity, acting on ester bonds - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009165 320.0
BYD3_k127_2794079_13 Putative cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001444 310.0
BYD3_k127_2794079_14 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA K03500 - 2.1.1.176 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000119 303.0
BYD3_k127_2794079_15 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 - 2.1.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001515 302.0
BYD3_k127_2794079_16 PFAM transferase hexapeptide repeat containing protein K00966 - 2.7.7.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005044 297.0
BYD3_k127_2794079_17 PFAM phosphoesterase, RecJ domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004666 291.0
BYD3_k127_2794079_18 Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate K01619 - 4.1.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000501 264.0
BYD3_k127_2794079_19 Ribulose-phosphate 3 epimerase family K01783 - 5.1.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000001495 262.0
BYD3_k127_2794079_2 Peptidase family M3 K01284 - 3.4.15.5 2.668e-272 854.0
BYD3_k127_2794079_20 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001986 283.0
BYD3_k127_2794079_21 ABC transporter K02065 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001631 256.0
BYD3_k127_2794079_22 Permease MlaE K02066 - - 0.00000000000000000000000000000000000000000000000000000000000000000000005375 248.0
BYD3_k127_2794079_23 methyltransferase - GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0016740,GO:0016741,GO:0032259,GO:0044424,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000002696 237.0
BYD3_k127_2794079_24 Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate K00761 GO:0003674,GO:0003824,GO:0004849,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006206,GO:0006213,GO:0006220,GO:0006221,GO:0006222,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008655,GO:0009058,GO:0009112,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009173,GO:0009174,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0018130,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0043094,GO:0043097,GO:0043174,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046049,GO:0046131,GO:0046132,GO:0046134,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0071944,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.2.9 0.000000000000000000000000000000000000000000000000000000000001535 215.0
BYD3_k127_2794079_25 Belongs to the purine pyrimidine phosphoribosyltransferase family K00760 - 2.4.2.8 0.000000000000000000000000000000000000000000000000000002425 198.0
BYD3_k127_2794079_26 MlaD protein K02067 - - 0.00000000000000000000000000000000000000000000003909 183.0
BYD3_k127_2794079_27 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.000000000000000000000000000000000000000000462 173.0
BYD3_k127_2794079_28 hydrolase activity, acting on ester bonds - - - 0.000000000000000000000000000000000000000000654 168.0
BYD3_k127_2794079_29 CDP-alcohol phosphatidyltransferase K00995 - 2.7.8.5 0.000000000000000000000000000000000000000003716 162.0
BYD3_k127_2794079_3 Belongs to the argininosuccinate synthase family. Type 2 subfamily K01940 GO:0000050,GO:0000053,GO:0003674,GO:0003824,GO:0004055,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006575,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0019627,GO:0019752,GO:0034641,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:0072350,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 6.3.4.5 1.976e-249 774.0
BYD3_k127_2794079_30 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.00000000000000000000000000000000000003596 164.0
BYD3_k127_2794079_31 Outer membrane lipoprotein K05807,K08309 GO:0005575,GO:0005623,GO:0008104,GO:0008150,GO:0009279,GO:0009987,GO:0016020,GO:0016043,GO:0019867,GO:0022607,GO:0030312,GO:0030313,GO:0031224,GO:0031230,GO:0031241,GO:0031246,GO:0031975,GO:0032991,GO:0033036,GO:0034613,GO:0043163,GO:0043165,GO:0044085,GO:0044091,GO:0044425,GO:0044462,GO:0044464,GO:0045184,GO:0045229,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0061024,GO:0070727,GO:0071709,GO:0071840,GO:0071944,GO:0072657,GO:0090150,GO:0098552,GO:0098796,GO:1990063 - 0.00000000000000000000000000000000000008725 151.0
BYD3_k127_2794079_32 thioesterase K07107 - - 0.000000000000000000000000000000129 132.0
BYD3_k127_2794079_33 von Willebrand factor, type A - - - 0.00000000000000000000000000000193 132.0
BYD3_k127_2794079_34 galactose-6-phosphate isomerase activity K00568,K01808 - 2.1.1.222,2.1.1.64,5.3.1.6 0.000000000000000000000000000003234 127.0
BYD3_k127_2794079_35 Adenylate cyclase - - - 0.00000000000000000000000000002044 136.0
BYD3_k127_2794079_36 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03437 - - 0.00000000000000000000000003676 118.0
BYD3_k127_2794079_37 Serine threonine protein kinase K12132 - 2.7.11.1 0.0000000000000000000003848 107.0
BYD3_k127_2794079_38 nucleoside 2-deoxyribosyltransferase - - - 0.000000000000000000003415 106.0
BYD3_k127_2794079_39 Rhomboid family K19225 - 3.4.21.105 0.000000000000006476 87.0
BYD3_k127_2794079_4 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III K01835,K01840 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 5.4.2.2,5.4.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001322 565.0
BYD3_k127_2794079_40 Sigma-54 interaction domain K02584 - - 0.000000000003621 80.0
BYD3_k127_2794079_42 LysM domain K01185,K02030,K04043 - 3.2.1.17 0.000001854 58.0
BYD3_k127_2794079_43 serine-type endopeptidase activity K04771 - 3.4.21.107 0.000002486 59.0
BYD3_k127_2794079_44 gas vesicle protein - - - 0.00005287 50.0
BYD3_k127_2794079_45 Patatin-like phospholipase K07001 - - 0.0001596 54.0
BYD3_k127_2794079_5 MgsA AAA+ ATPase C terminal K07478 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001103 502.0
BYD3_k127_2794079_6 Amidohydrolase family K12960 - 3.5.4.28,3.5.4.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008972 458.0
BYD3_k127_2794079_7 Aldo/keto reductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001786 403.0
BYD3_k127_2794079_8 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006173 403.0
BYD3_k127_2794079_9 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001321 385.0
BYD3_k127_2868706_0 Glycogen debranching enzyme - - - 1.865e-255 807.0
BYD3_k127_2868706_1 Cytochrome c-type biogenesis protein K02198 - - 1.35e-227 731.0
BYD3_k127_2868706_10 Maf-like protein K06287 - - 0.0000000000000000000000000000000000000000000000004367 187.0
BYD3_k127_2868706_11 Cytochrome C assembly protein K02195 - - 0.00000000000000000000000000000000000000000000000252 180.0
BYD3_k127_2868706_12 ABC transporter K02193 - 3.6.3.41 0.000000000000000000000000000000000000000006937 170.0
BYD3_k127_2868706_13 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 GO:0000287,GO:0003674,GO:0003824,GO:0004765,GO:0005488,GO:0006082,GO:0006520,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019438,GO:0019632,GO:0019752,GO:0032787,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046872,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615 2.7.1.71 0.00000000000000000000000000000003014 134.0
BYD3_k127_2868706_14 Histidine kinase-like ATPase domain K04757 - 2.7.11.1 0.000000000000000000000000000009395 123.0
BYD3_k127_2868706_15 oligosaccharyl transferase activity K00721 - 2.4.1.83 0.00000000000000000000000004613 125.0
BYD3_k127_2868706_16 PFAM SNARE associated Golgi protein - - - 0.0000000000000000000003532 109.0
BYD3_k127_2868706_17 Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH K02197 - - 0.000000000000000002729 90.0
BYD3_k127_2868706_19 - - - - 0.000000000002139 76.0
BYD3_k127_2868706_2 oxidoreductase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003406 407.0
BYD3_k127_2868706_20 DNA-templated transcription, initiation - - - 0.000000000286 63.0
BYD3_k127_2868706_21 - - - - 0.00002157 56.0
BYD3_k127_2868706_3 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002008 393.0
BYD3_k127_2868706_4 Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine cysteine desulfurase (IscS) system K14058 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005696 269.0
BYD3_k127_2868706_5 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000007636 256.0
BYD3_k127_2868706_6 Inositol monophosphatase family K01092 - 3.1.3.25 0.000000000000000000000000000000000000000000000000000000000000000000000009867 252.0
BYD3_k127_2868706_7 Calcineurin-like phosphoesterase superfamily domain - - - 0.0000000000000000000000000000000000000000000000000000000003978 212.0
BYD3_k127_2868706_8 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02194 - - 0.000000000000000000000000000000000000000000000000000000006998 205.0
BYD3_k127_2868706_9 Membrane - - - 0.000000000000000000000000000000000000000000000000000000009476 204.0
BYD3_k127_2896539_0 belongs to the thioredoxin family K03671,K05838 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0016020,GO:0030312,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003074 437.0
BYD3_k127_2896539_1 Domain of unknown function (DUF4331) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001824 417.0
BYD3_k127_2896539_2 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008991 413.0
BYD3_k127_2896539_3 Tetratricopeptide repeat - - - 0.000000000000000000000000001594 126.0
BYD3_k127_2896539_4 repeat-containing protein - - - 0.0000000003021 73.0
BYD3_k127_2896539_5 Tetratricopeptide repeat - - - 0.000004884 59.0
BYD3_k127_2938090_0 ABC transporter - - - 0.0 1304.0
BYD3_k127_2938090_1 TIGRFAM NiFe hydrogenase maturation protein HypF K04656 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003562 579.0
BYD3_k127_2938090_10 Cobalamin adenosyltransferase K00798 - 2.5.1.17 0.00000000000000000000000000000000000000000000000000000196 202.0
BYD3_k127_2938090_11 PFAM periplasmic binding protein K02016 - - 0.0000000000000000000000000000000000000000000000000002631 199.0
BYD3_k127_2938090_12 Phosphoglycerate mutase family K02226 - 3.1.3.73 0.00000000000000000000000000000000000000000000000001375 198.0
BYD3_k127_2938090_13 Short repeat of unknown function (DUF308) - - - 0.00000000000000000000000000000000000000000000004896 175.0
BYD3_k127_2938090_14 negative regulation of transcription, DNA-templated - - - 0.0000000000000000000000000000000000000001208 153.0
BYD3_k127_2938090_15 Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate K02233 - 2.7.8.26 0.0000000000000000000000000000000000000001488 160.0
BYD3_k127_2938090_16 coenzyme binding K07071 - - 0.0000000000000000000000000000000000000002461 166.0
BYD3_k127_2938090_17 Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate K02231 - 2.7.1.156,2.7.7.62 0.00000000000000000000000000000000000003299 152.0
BYD3_k127_2938090_18 - K02172 - - 0.000000000000000000000000000000006293 139.0
BYD3_k127_2938090_19 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455 - - 0.0000000000000000000000000000002268 123.0
BYD3_k127_2938090_20 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.000000000000000000000000001816 124.0
BYD3_k127_2938090_21 DNA-templated transcription, initiation K03088 - - 0.000000000000000000000001154 112.0
BYD3_k127_2938090_22 Peptidase M56, BlaR1 - - - 0.000000000000000000000008603 113.0
BYD3_k127_2938090_23 Metallo-beta-lactamase superfamily - - - 0.000368 49.0
BYD3_k127_2938090_3 Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6- dimethylbenzimidazole (DMB) K00768 - 2.4.2.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004712 324.0
BYD3_k127_2938090_4 Helix-turn-helix domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002435 335.0
BYD3_k127_2938090_5 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000552 293.0
BYD3_k127_2938090_6 Domain of unknown function (DUF1877) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005655 289.0
BYD3_k127_2938090_7 Protein of unknown function (DUF3738) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002427 284.0
BYD3_k127_2938090_8 Methyladenine glycosylase K01246 - 3.2.2.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000546 268.0
BYD3_k127_2938090_9 - - - - 0.0000000000000000000000000000000000000000000000000000000000002021 226.0
BYD3_k127_2944345_0 Belongs to the type-B carboxylesterase lipase family K03929 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005021 487.0
BYD3_k127_2944345_1 Serine aminopeptidase, S33 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001623 317.0
BYD3_k127_2944345_2 Major facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001448 322.0
BYD3_k127_2944345_3 Glyoxalase-like domain K06996 - - 0.000000000000000000000000000000000000000000000000000000000009747 223.0
BYD3_k127_2944345_4 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000001398 210.0
BYD3_k127_2952277_0 phosphorelay signal transduction system K02481 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000314 523.0
BYD3_k127_2952277_1 Biotin carboxylase C-terminal domain K01961 - 6.3.4.14,6.4.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002328 458.0
BYD3_k127_2952277_10 surface antigen - - - 0.00000003062 66.0
BYD3_k127_2952277_11 CAAX protease self-immunity - - - 0.00005615 53.0
BYD3_k127_2952277_2 Multi-sensor signal transduction histidine kinase K07710 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003217 343.0
BYD3_k127_2952277_3 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000227 302.0
BYD3_k127_2952277_4 surface antigen variable number - - - 0.00000000000000000000000000000000000000000000000000000000000000000001973 264.0
BYD3_k127_2952277_5 TamB, inner membrane protein subunit of TAM complex K09800 - - 0.000000000000000000000000000000000000000000000000000000000000000000206 263.0
BYD3_k127_2952277_6 - - - - 0.0000000000000000000000000000002498 132.0
BYD3_k127_2952277_7 - - - - 0.0000000000000000000006854 108.0
BYD3_k127_2952277_8 Biotin-requiring enzyme - - - 0.00000000000000000004099 98.0
BYD3_k127_2952277_9 - - - - 0.00000000000001982 79.0
BYD3_k127_2953084_0 Protein of unknown function (DUF1595) - - - 7.942e-291 922.0
BYD3_k127_2953084_1 Protein of unknown function (DUF1552) - - - 1.754e-220 695.0
BYD3_k127_2953084_2 ribosylpyrimidine nucleosidase activity - - - 0.0000000000000000000000000000000001941 154.0
BYD3_k127_2968398_0 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K13924 - 2.1.1.80,3.1.1.61 0.0 1626.0
BYD3_k127_2968398_1 Aldehyde dehydrogenase family K00128,K00146 - 1.2.1.3,1.2.1.39 1.021e-228 717.0
BYD3_k127_2968398_10 HpcH/HpaI aldolase/citrate lyase family K18292 - 4.1.3.25 0.000000000000000000000000000000000000000000000000000000000000000000000000001743 259.0
BYD3_k127_2968398_11 MerR, DNA binding K13639 - - 0.00000000000000000000000000000000000000000000000000000000000000000003761 235.0
BYD3_k127_2968398_12 gamma-carboxymuconolactone decarboxylase subunit K01607 - 4.1.1.44 0.00000000000000000000000000000000000000000000000000000000009019 205.0
BYD3_k127_2968398_13 Peptidase M56, BlaR1 - - - 0.00000000000000000000000000000000000000009078 161.0
BYD3_k127_2968398_14 Carboxymuconolactone decarboxylase family - - - 0.00000000000000000000000000000000875 148.0
BYD3_k127_2968398_15 PFAM Cupin 2 conserved barrel domain protein - - - 0.000000000000000000000284 102.0
BYD3_k127_2968398_16 Carboxymuconolactone decarboxylase family protein 2 - - - 0.00000000264 71.0
BYD3_k127_2968398_2 acyl-CoA dehydrogenase activity K00249 - 1.3.8.7 1.154e-195 616.0
BYD3_k127_2968398_3 MmgE/PrpD family K01720 - 4.2.1.79 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001395 475.0
BYD3_k127_2968398_4 PFAM Sodium sulphate symporter K03319,K11106 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001164 467.0
BYD3_k127_2968398_5 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K00020 - 1.1.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004158 403.0
BYD3_k127_2968398_6 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003017 398.0
BYD3_k127_2968398_7 SPFH domain-Band 7 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009974 336.0
BYD3_k127_2968398_8 NfeD-like C-terminal, partner-binding K07403 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001209 311.0
BYD3_k127_2968398_9 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001949 292.0
BYD3_k127_2980481_0 Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004457 253.0
BYD3_k127_2980481_1 Transcriptional regulator, Crp Fnr family - - - 0.00000000000000000000000000000000000000000000000000000000000006801 224.0
BYD3_k127_2980481_2 O-acyltransferase activity - - - 0.000000000000000000000000000000000000000000000000000000434 202.0
BYD3_k127_2980481_3 Peptidase family M48 - - - 0.0000000000000000000000000000000000000000000000000000007366 207.0
BYD3_k127_2980481_4 Cupin domain - - - 0.000000000000000000000000000000000000000000000000000004581 191.0
BYD3_k127_2980481_5 - - - - 0.000000000000000000000000000001594 121.0
BYD3_k127_2980481_6 Universal stress protein family - - - 0.000000000000000000000000000002233 126.0
BYD3_k127_2992807_0 Glycosyl transferase family 21 - - - 6.37e-196 622.0
BYD3_k127_2992807_1 Belongs to the citrate synthase family K01647 - 2.3.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003431 440.0
BYD3_k127_2992807_2 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding K07303 - 1.3.99.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002304 456.0
BYD3_k127_2992807_3 (AIR) carboxylase K06898 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006897 269.0
BYD3_k127_2992807_4 Esterase PHB depolymerase K03932 - - 0.0000000000000000000000000000000000000000000000000000000000002617 226.0
BYD3_k127_2992807_5 Aerobic-type carbon monoxide dehydrogenase small subunit CoxS K07302 - 1.3.99.16 0.00000000000000000000000000000000000000000000000000000000001268 211.0
BYD3_k127_2992807_6 - - - - 0.000000000000000000000000000000000000000000000000000000009219 211.0
BYD3_k127_2992807_7 - - - - 0.00000000000000000000000000000000000000000000003704 176.0
BYD3_k127_3014843_0 Aminotransferase class I and II - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001678 607.0
BYD3_k127_3014843_1 PFAM NAD dependent epimerase dehydratase family K08679 - 5.1.3.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001661 435.0
BYD3_k127_3014843_2 PFAM Glucose Sorbosone dehydrogenase K21430 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007403 317.0
BYD3_k127_3014843_3 Ankyrin repeats (many copies) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004397 316.0
BYD3_k127_3014843_4 esterase of the alpha-beta hydrolase superfamily K07001 - - 0.000000000005829 68.0
BYD3_k127_3018819_0 electron transfer activity K00428 - 1.11.1.5 2.201e-199 632.0
BYD3_k127_3018819_1 AMP-binding enzyme C-terminal domain K01897 - 6.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002228 590.0
BYD3_k127_3018819_10 poly(R)-hydroxyalkanoic acid synthase K03821 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0008152,GO:0009058,GO:0016234,GO:0042618,GO:0042619,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464,GO:0070088,GO:0071704,GO:1901440,GO:1901441,GO:1901576 - 0.000000000000000000000000000000000000000002541 171.0
BYD3_k127_3018819_11 Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin - - - 0.00000000000000000000000000000000000000005918 153.0
BYD3_k127_3018819_12 EamA-like transporter family K07790 - - 0.00000000000000000000000000000000000001336 156.0
BYD3_k127_3018819_13 Cytochrome c - - - 0.0000000000000000000000000001519 122.0
BYD3_k127_3018819_14 Helix-turn-helix XRE-family like proteins - - - 0.000000000000000000000008768 104.0
BYD3_k127_3018819_15 PFAM PEGA domain - - - 0.00000000000000005269 96.0
BYD3_k127_3018819_16 Protein kinase domain - - - 0.000000000000007071 76.0
BYD3_k127_3018819_17 DNA-templated transcription, initiation K03088 - - 0.0000000002854 69.0
BYD3_k127_3018819_18 Protein tyrosine kinase - - - 0.0000000815 54.0
BYD3_k127_3018819_19 - - - - 0.000001604 54.0
BYD3_k127_3018819_2 Sugar (and other) transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002986 354.0
BYD3_k127_3018819_3 Sir2 family K12410 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000441 314.0
BYD3_k127_3018819_4 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001581 288.0
BYD3_k127_3018819_5 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000004418 227.0
BYD3_k127_3018819_6 Peptidylprolyl isomerase K03771 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000001451 207.0
BYD3_k127_3018819_7 Polyketide cyclase / dehydrase and lipid transport - - - 0.000000000000000000000000000000000000000000000000000593 192.0
BYD3_k127_3018819_8 Serine aminopeptidase, S33 K22250 - 3.1.1.76 0.0000000000000000000000000000000000000000000000000007232 194.0
BYD3_k127_3018819_9 Protein of unknown function (DUF1722) - - - 0.000000000000000000000000000000000000000000000000001567 188.0
BYD3_k127_3029835_0 Carboxylesterase family K03929 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003951 338.0
BYD3_k127_3029835_1 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000008317 211.0
BYD3_k127_3029835_2 - - - - 0.000000000000000000002409 106.0
BYD3_k127_3029835_3 belongs to the sigma-70 factor family, ECF subfamily K03088 - - 0.0000000002941 66.0
BYD3_k127_3033273_0 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008746 477.0
BYD3_k127_3033273_1 Belongs to the phosphoglycerate kinase family K00927 - 2.7.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001365 456.0
BYD3_k127_3033273_2 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002006 293.0
BYD3_k127_3033273_3 PFAM Preprotein translocase SecG subunit K03075 - - 0.000000000001575 72.0
BYD3_k127_3056792_0 arylsulfatase activity K01132 - 3.1.6.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000714 488.0
BYD3_k127_3056792_1 Metal-dependent hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001059 306.0
BYD3_k127_3056792_2 MarR family transcriptional regulator - - - 0.000000000000000000000000000000000003053 144.0
BYD3_k127_3056792_3 transport - - - 0.00000000000000000001614 94.0
BYD3_k127_3056792_4 - - - - 0.000000000000002461 86.0
BYD3_k127_3196652_0 Phosphotransfer between the C1 and C5 carbon atoms of pentose K01839 - 5.4.2.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005402 451.0
BYD3_k127_3196652_1 Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2) K11784 - 1.21.98.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009785 405.0
BYD3_k127_3196652_10 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.000000000000000000000000000000000000000000000000000000000003794 214.0
BYD3_k127_3196652_11 Catalyzes the dehydration of chorismate into 3- (1- carboxyvinyl)oxy benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K07081,K11782,K11784 - 1.21.98.1,4.2.1.151 0.00000000000000000000000000000000000000000000000001384 190.0
BYD3_k127_3196652_12 TipAS antibiotic-recognition domain - - - 0.0000000000000000000000000000006994 132.0
BYD3_k127_3196652_13 Uncharacterized ACR, COG1399 K07040 - - 0.00000000000000000000000000002423 124.0
BYD3_k127_3196652_14 Elongator protein 3, MiaB family, Radical SAM K18285 - 2.5.1.120 0.000000000000000000001012 106.0
BYD3_k127_3196652_15 Ribosomal L32p protein family K02911 - - 0.000000000000000000008799 93.0
BYD3_k127_3196652_16 RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs K03666 - - 0.000000000002366 72.0
BYD3_k127_3196652_17 TonB C terminal - - - 0.0000000000393 74.0
BYD3_k127_3196652_18 PFAM Outer membrane K06142 - - 0.0001945 52.0
BYD3_k127_3196652_2 TIGRFAM deoxyguanosinetriphosphate triphosphohydrolase K01129 - 3.1.5.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009987 383.0
BYD3_k127_3196652_3 Oxidoreductase family, NAD-binding Rossmann fold K09949 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009973 276.0
BYD3_k127_3196652_4 Protein of unknown function (DUF1009) K09949 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005062 284.0
BYD3_k127_3196652_5 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008374,GO:0008610,GO:0008654,GO:0008780,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016740,GO:0016746,GO:0016747,GO:0019637,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.3.1.129 0.00000000000000000000000000000000000000000000000000000000000000000000000005256 265.0
BYD3_k127_3196652_6 UbiA prenyltransferase family K03179 - 2.5.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000006201 260.0
BYD3_k127_3196652_7 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.5.1.75 0.000000000000000000000000000000000000000000000000000000000000000000000008345 254.0
BYD3_k127_3196652_8 Amidohydrolase family K20810 - 3.5.4.40 0.000000000000000000000000000000000000000000000000000000000000000000002886 250.0
BYD3_k127_3196652_9 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) K03183 - 2.1.1.163,2.1.1.201 0.000000000000000000000000000000000000000000000000000000000000006363 224.0
BYD3_k127_3237757_0 COG1541 Coenzyme F390 synthetase K01912 - 6.2.1.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003562 362.0
BYD3_k127_3237757_1 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000007701 209.0
BYD3_k127_3237757_2 - - - - 0.000000000000000000000000000000000000000000000000002577 195.0
BYD3_k127_3237757_3 SIR2-like domain - - - 0.000000000000000000000000000000000000000000000004455 189.0
BYD3_k127_3237757_4 sigma factor activity K02405 - - 0.000000000000000000000000000000000000001003 161.0
BYD3_k127_3237757_5 Tetratricopeptide repeat - - - 0.000000000000000000002974 111.0
BYD3_k127_3237757_6 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain - - - 0.00000000000000000004224 102.0
BYD3_k127_3237757_7 - - - - 0.0000000000000005065 89.0
BYD3_k127_3261706_0 AcrB/AcrD/AcrF family - - - 0.0 1191.0
BYD3_k127_3261706_1 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0016465,GO:0032991,GO:0044183,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051082,GO:0061077,GO:0101031,GO:1990220 - 7.597e-238 745.0
BYD3_k127_3261706_10 Doubled CXXCH motif (Paired_CXXCH_1) K08354 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001962 251.0
BYD3_k127_3261706_11 ABC transporter K02065 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002269 248.0
BYD3_k127_3261706_12 Phosphoribosyl transferase domain K07100 - - 0.0000000000000000000000000000000000000000000000000000000000000000000003233 247.0
BYD3_k127_3261706_13 dienelactone hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000001793 243.0
BYD3_k127_3261706_14 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 GO:0000988,GO:0000990,GO:0003674,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006352,GO:0006355,GO:0006725,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016070,GO:0016987,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0031323,GO:0031326,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0043254,GO:0044087,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097659,GO:0140110,GO:1901360,GO:1901362,GO:1901576,GO:1903506,GO:2000112,GO:2000142,GO:2001141 - 0.00000000000000000000000000000000000000000000000000000000000000003925 239.0
BYD3_k127_3261706_15 - - - - 0.0000000000000000000000000000000000000000000000000000001155 207.0
BYD3_k127_3261706_16 - - - - 0.000000000000000000000000000000000000000000000000001212 193.0
BYD3_k127_3261706_17 ) H( ) antiporter that extrudes sodium in exchange for external protons K03313 - - 0.0000000000000000000000000000000000000000000000005947 196.0
BYD3_k127_3261706_18 BON domain K04065 - - 0.0000000000000000000000000000000000000000000000009484 182.0
BYD3_k127_3261706_19 Peptidase family M23 - - - 0.000000000000000000000000000000000000000000000003944 190.0
BYD3_k127_3261706_2 phosphatase activity - - - 1.679e-203 650.0
BYD3_k127_3261706_20 Haem-binding domain - - - 0.0000000000000000000000000000000000000000006356 161.0
BYD3_k127_3261706_21 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.00000000000000000000000000000000008287 149.0
BYD3_k127_3261706_22 VIT family - - - 0.0000000000000000000000000000000004819 138.0
BYD3_k127_3261706_24 pathogenesis K07507 - - 0.0000000000000000000000000000008018 129.0
BYD3_k127_3261706_25 redox protein regulator of disulfide bond formation - - - 0.000000000000000000000000000008882 124.0
BYD3_k127_3261706_26 - - - - 0.0000000000000000000000000008321 125.0
BYD3_k127_3261706_27 transposase IS116 IS110 IS902 family - - - 0.0000000000000000000005891 98.0
BYD3_k127_3261706_28 membrane transporter protein K07090 - - 0.000000000000000000001618 103.0
BYD3_k127_3261706_29 ribosomal large subunit export from nucleus - - - 0.00000000000000000001479 98.0
BYD3_k127_3261706_3 Alcohol dehydrogenase GroES-like domain K00344 - 1.6.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008529 544.0
BYD3_k127_3261706_31 - - - - 0.0000000000000001132 93.0
BYD3_k127_3261706_32 Protein of unknown function (DUF2892) - - - 0.0000000000000002557 82.0
BYD3_k127_3261706_33 Domain of unknown function (DUF4956) - - - 0.000000000000002284 84.0
BYD3_k127_3261706_34 outer membrane efflux protein - - - 0.0000000000001703 83.0
BYD3_k127_3261706_35 Cytochrome c K00413 - - 0.00000000001411 69.0
BYD3_k127_3261706_36 - - - - 0.0000000000382 71.0
BYD3_k127_3261706_37 PFAM transposase IS116 IS110 IS902 family - - - 0.000000001562 63.0
BYD3_k127_3261706_38 Dual specificity phosphatase, catalytic domain - - - 0.00000007623 61.0
BYD3_k127_3261706_39 Putative outer membrane beta-barrel porin, MtrB/PioB - - - 0.0001367 53.0
BYD3_k127_3261706_4 peptidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001756 524.0
BYD3_k127_3261706_40 - - - - 0.0001502 50.0
BYD3_k127_3261706_5 Erythromycin esterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001363 491.0
BYD3_k127_3261706_6 AAA domain K07028 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005476 475.0
BYD3_k127_3261706_7 NapC/NirT cytochrome c family, N-terminal region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002381 377.0
BYD3_k127_3261706_8 Calcineurin-like phosphoesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003423 280.0
BYD3_k127_3261706_9 ErfK YbiS YcfS YnhG family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000102 259.0
BYD3_k127_3270277_0 4Fe-4S dicluster domain K00184 - - 0.0 1155.0
BYD3_k127_3270277_1 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001104 487.0
BYD3_k127_3270277_10 Protein of unknown function (DUF3738) - - - 0.00006764 51.0
BYD3_k127_3270277_2 PFAM Nucleotidyl transferase K00963 - 2.7.7.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002631 364.0
BYD3_k127_3270277_3 Cytochrome c7 and related cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006951 294.0
BYD3_k127_3270277_4 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001814 278.0
BYD3_k127_3270277_5 Bacterial protein of unknown function (DUF885) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001775 252.0
BYD3_k127_3270277_6 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03767,K03768 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000002076 239.0
BYD3_k127_3270277_7 Thioredoxin domain - - - 0.000000000000000000000000000000000000000000002597 172.0
BYD3_k127_3270277_9 Regulatory protein, FmdB - - - 0.0000000000000003307 91.0
BYD3_k127_328364_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1181.0
BYD3_k127_328364_1 C-terminus of AA_permease K03294 - - 2.935e-221 695.0
BYD3_k127_328364_2 3-demethylubiquinone-9 3-methyltransferase K00568 - 2.1.1.222,2.1.1.64 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001325 288.0
BYD3_k127_328364_3 amine dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004006 261.0
BYD3_k127_328364_4 HNH nucleases - - - 0.000000000000000000000000000000000000000000000000000000000000000002475 231.0
BYD3_k127_328364_5 UDP-3-O-acyl N-acetylglycosamine deacetylase K02535 GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008270,GO:0008610,GO:0008654,GO:0008759,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016787,GO:0016810,GO:0016811,GO:0019213,GO:0019637,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044464,GO:0046467,GO:0046493,GO:0046872,GO:0046914,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 3.5.1.108 0.00000000000000000000000000000000000000000000000008797 184.0
BYD3_k127_328364_6 domain protein K14194 - - 0.000000000000000000000000000000000007443 154.0
BYD3_k127_328364_7 NlpC P60 family protein - - - 0.0000000000000000000000000000001804 131.0
BYD3_k127_328364_8 protocatechuate 3,4-dioxygenase activity K02014 - - 0.0000000000006834 82.0
BYD3_k127_328364_9 Amidohydrolase family - - - 0.00000003535 57.0
BYD3_k127_3298620_0 DNA topological change K03168 - 5.99.1.2 4.581e-214 714.0
BYD3_k127_3298620_1 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006967 529.0
BYD3_k127_3298620_10 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K06187,K09747 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464,GO:0097159,GO:1901363 - 0.0000000000000000000000000000172 120.0
BYD3_k127_3298620_11 Ankyrin repeats (many copies) - - - 0.00000000000000000000001002 117.0
BYD3_k127_3298620_12 Cytochrome c - - - 0.00000000004846 66.0
BYD3_k127_3298620_13 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000001963 67.0
BYD3_k127_3298620_14 function. Source PGD - - - 0.00005363 55.0
BYD3_k127_3298620_2 Belongs to the aspartokinase family K00928 - 2.7.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003449 386.0
BYD3_k127_3298620_3 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001307 370.0
BYD3_k127_3298620_4 PFAM peptidase K01438 - 3.5.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001883 335.0
BYD3_k127_3298620_5 long-chain fatty acid transporting porin activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001111 332.0
BYD3_k127_3298620_6 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001135 329.0
BYD3_k127_3298620_7 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001149 275.0
BYD3_k127_3298620_8 Belongs to the DapB family K00215 - 1.17.1.8 0.000000000000000000000000000000000000000000000000000000000005363 215.0
BYD3_k127_3298620_9 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000002886 163.0
BYD3_k127_3305350_0 AMP-binding enzyme C-terminal domain K00666 - - 1.102e-234 742.0
BYD3_k127_3305350_1 Tannase and feruloyl esterase - - - 0.0000000000000000000000000000000000000000000000000000000000008925 221.0
BYD3_k127_3305350_2 transcriptional regulator - - - 0.0000000000000000000000000000000000000000000001358 174.0
BYD3_k127_3305350_3 Transcriptional regulator, LysR - - - 0.000000000000000000000000000004236 131.0
BYD3_k127_3336392_0 The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis K00756,K00758 - 2.4.2.2,2.4.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003815 306.0
BYD3_k127_3336392_1 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.000000000000000000000000000000000000000000000000000000000000000003748 246.0
BYD3_k127_3336392_2 Belongs to the peptidase S8 family K14645 - - 0.000000000000000000000000000000000000000000000000000000000000000327 239.0
BYD3_k127_3336392_3 SMART Metal-dependent phosphohydrolase, HD region - - - 0.0000000000000000000000000000000000000000000000000000003357 216.0
BYD3_k127_3336392_4 energy transducer activity K03832 - - 0.000000000000000000000000000000000000000000000008731 195.0
BYD3_k127_3336392_5 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000000002542 168.0
BYD3_k127_3336392_6 Putative adhesin - - - 0.0000000000000000000004993 109.0
BYD3_k127_3336392_7 Methyltransferase K07443 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0005488,GO:0005515,GO:0019899,GO:0097159,GO:1901363 - 0.0000000000002745 81.0
BYD3_k127_3336392_8 Putative zinc-finger K03088 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0016020,GO:0030312,GO:0044464,GO:0071944 - 0.0000000001033 72.0
BYD3_k127_3336392_9 PBS lyase HEAT-like repeat - - - 0.00004661 57.0
BYD3_k127_3337763_0 Carbohydrate family 9 binding domain-like - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000169 610.0
BYD3_k127_3337763_1 PFAM Pyrrolo-quinoline quinone K00117 - 1.1.5.2 0.0000000000000000000000000000000000000001505 154.0
BYD3_k127_3337763_2 Cupin 2, conserved barrel domain protein - - - 0.000000000000000000000000000000000000001079 148.0
BYD3_k127_3337763_3 Pyrrolo-quinoline quinone K00114 - 1.1.2.8 0.00001508 51.0
BYD3_k127_3352183_0 Glucose Sorbosone dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004342 438.0
BYD3_k127_3352183_1 Peptidase family S49 K04773 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001619 402.0
BYD3_k127_3352183_2 TIGRFAM Cell shape determining protein MreB Mrl K03569 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005294 296.0
BYD3_k127_3352183_3 peptidyl-prolyl isomerase K03770 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000431 315.0
BYD3_k127_3352183_4 diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000004694 186.0
BYD3_k127_3352183_5 CAAX protease self-immunity - - - 0.0000000000000000000000000002941 123.0
BYD3_k127_3352183_6 peptidyl-prolyl cis-trans isomerase K03772 - 5.2.1.8 0.00000005093 59.0
BYD3_k127_3409743_0 carbamoyl transferase, NodU family K00612 - - 2.103e-285 887.0
BYD3_k127_3409743_1 trisaccharide binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001837 553.0
BYD3_k127_3409743_10 WD40 domain protein beta Propeller K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000007666 220.0
BYD3_k127_3409743_11 PAS domain containing protein - - - 0.0000000000000000000000000000000000000000000000000000002379 223.0
BYD3_k127_3409743_12 TonB-dependent receptor - - - 0.000000000000000000000000000000000000000000000000001175 211.0
BYD3_k127_3409743_13 SnoaL-like polyketide cyclase - - - 0.00000000000000000000000000000000000000000000009451 181.0
BYD3_k127_3409743_14 Protein tyrosine kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000002924 173.0
BYD3_k127_3409743_15 phosphohistidine phosphatase, SixA K08296 - - 0.0000000000000000000000000000000000000000004511 162.0
BYD3_k127_3409743_16 Peptidase M56, BlaR1 - - - 0.00000000000000000000000000000001921 137.0
BYD3_k127_3409743_17 PAS domain containing protein K13924 - 2.1.1.80,3.1.1.61 0.00000000000000000000000000000002347 147.0
BYD3_k127_3409743_18 Cold shock protein domain - - - 0.000000000000000002259 86.0
BYD3_k127_3409743_19 lyase activity - - - 0.00000000000000002538 97.0
BYD3_k127_3409743_2 methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000197 392.0
BYD3_k127_3409743_21 Divergent 4Fe-4S mono-cluster K05337 - - 0.00000000000003289 79.0
BYD3_k127_3409743_22 DinB superfamily - - - 0.0000000000002545 82.0
BYD3_k127_3409743_23 PFAM Tetratricopeptide repeat - - - 0.000000000001589 81.0
BYD3_k127_3409743_24 - - - - 0.0000000003749 65.0
BYD3_k127_3409743_25 - - - - 0.0000000004084 66.0
BYD3_k127_3409743_26 - - - - 0.0000000007846 66.0
BYD3_k127_3409743_27 COG0639 Diadenosine tetraphosphatase and related serine threonine protein phosphatases - - - 0.00000001655 69.0
BYD3_k127_3409743_28 BlaR1 peptidase M56 - - - 0.00000002067 60.0
BYD3_k127_3409743_3 pyridine nucleotide-disulphide oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004216 389.0
BYD3_k127_3409743_4 Domain of unknown function (DUF3943) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001081 355.0
BYD3_k127_3409743_6 cAMP biosynthetic process - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005745 302.0
BYD3_k127_3409743_7 PFAM metal-dependent phosphohydrolase, HD sub domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000322 275.0
BYD3_k127_3409743_8 Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000009722 244.0
BYD3_k127_3409743_9 Transporter, small conductance mechanosensitive ion channel MscS family protein - - - 0.0000000000000000000000000000000000000000000000000000000000386 218.0
BYD3_k127_341813_0 Sigma factor PP2C-like phosphatases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005656 625.0
BYD3_k127_341813_1 N-terminal domain of toast_rack, DUF2154 - - - 0.000000000000000000000000000000000000007635 154.0
BYD3_k127_341813_2 - - - - 0.0000000000000005868 87.0
BYD3_k127_341813_3 - - - - 0.0000000003601 67.0
BYD3_k127_343015_0 Protein of unknown function (DUF2817) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002111 460.0
BYD3_k127_343015_1 Cytidylyltransferase family K00981 - 2.7.7.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003954 385.0
BYD3_k127_343015_10 phosphoglycerate mutase K01834 - 5.4.2.11 0.0000000000000000000000000000000000000002156 155.0
BYD3_k127_343015_11 bis(5'-adenosyl)-triphosphatase activity K02503 - - 0.0000000000000000000000000000000000004155 145.0
BYD3_k127_343015_12 - - - - 0.0000000000009715 73.0
BYD3_k127_343015_13 SMART Transport-associated and nodulation - - - 0.00000001116 63.0
BYD3_k127_343015_14 protein trimerization K02453 - - 0.0000002051 57.0
BYD3_k127_343015_15 - - - - 0.00000598 52.0
BYD3_k127_343015_16 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00004683 51.0
BYD3_k127_343015_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001909 325.0
BYD3_k127_343015_3 LysE type translocator - - - 0.000000000000000000000000000000000000000000000000000000000000000003593 231.0
BYD3_k127_343015_4 PFAM OsmC family protein - - - 0.000000000000000000000000000000000000000000000000000006967 193.0
BYD3_k127_343015_5 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000000000001166 192.0
BYD3_k127_343015_6 Acyltransferase - - - 0.00000000000000000000000000000000000000000000000003735 196.0
BYD3_k127_343015_7 Endoribonuclease L-PSP - - - 0.000000000000000000000000000000000000000000009763 172.0
BYD3_k127_343015_8 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000001721 165.0
BYD3_k127_343015_9 Belongs to the CDP-alcohol phosphatidyltransferase class-I family - - - 0.00000000000000000000000000000000000000002217 171.0
BYD3_k127_3494915_0 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 - 6.5.1.2 4.278e-196 633.0
BYD3_k127_3494915_1 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002031 612.0
BYD3_k127_3494915_10 Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine cysteine desulfurase (IscS) system K14058 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001282 270.0
BYD3_k127_3494915_11 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006744 256.0
BYD3_k127_3494915_12 HxlR-like helix-turn-helix - - - 0.000000000000000000000000000000000000000000000000000000000000000000001395 247.0
BYD3_k127_3494915_13 Hydrolase, TatD family K03424 - - 0.0000000000000000000000000000000000000000000000000000000005861 212.0
BYD3_k127_3494915_14 RadC-like JAB domain K03630 - - 0.000000000000000000000000000000000000000000000000000004547 197.0
BYD3_k127_3494915_15 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 - - 0.000000000000000000000000000000000000000000000000009408 184.0
BYD3_k127_3494915_16 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.000000000000000000000000000000000000000000000000042 192.0
BYD3_k127_3494915_17 amine dehydrogenase activity - - - 0.00000000000000000000001024 115.0
BYD3_k127_3494915_18 - - - - 0.0000000000000007431 88.0
BYD3_k127_3494915_19 - - - - 0.000000003912 64.0
BYD3_k127_3494915_2 COGs COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains K13599 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003336 514.0
BYD3_k127_3494915_20 - - - - 0.0002464 51.0
BYD3_k127_3494915_3 PFAM LmbE family protein K22136 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001382 517.0
BYD3_k127_3494915_4 Amidohydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005093 458.0
BYD3_k127_3494915_5 PFAM Sodium sulphate symporter K14445 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009984 457.0
BYD3_k127_3494915_6 Protein of unknown function DUF111 K09121 - 4.99.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001161 386.0
BYD3_k127_3494915_7 PFAM NAD-dependent epimerase dehydratase K01784,K02473 - 5.1.3.2,5.1.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006152 376.0
BYD3_k127_3494915_8 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003536 323.0
BYD3_k127_3494915_9 Belongs to the FPP GGPP synthase family K02523,K13789 - 2.5.1.1,2.5.1.10,2.5.1.29,2.5.1.90 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001831 277.0
BYD3_k127_350723_0 Efflux pump membrane transporter K18299 - - 0.0 1431.0
BYD3_k127_350723_1 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K07303 - 1.3.99.16 8.43e-216 692.0
BYD3_k127_350723_10 Mannosyl-3-phosphoglycerate phosphatase K07026 - 3.1.3.70 0.0001693 51.0
BYD3_k127_350723_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K18298 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009012 381.0
BYD3_k127_350723_3 2Fe-2S -binding domain protein K07302 - 1.3.99.16 0.00000000000000000000000000000000000000000000000000000000000000000406 228.0
BYD3_k127_350723_4 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000000000000000000000003218 224.0
BYD3_k127_350723_5 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000001544 231.0
BYD3_k127_350723_6 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000003837 174.0
BYD3_k127_350723_7 - - - - 0.000000000000000004845 98.0
BYD3_k127_350723_8 Laminin B (Domain IV) - - - 0.0000000000000001184 92.0
BYD3_k127_3513358_0 Integrin alpha (beta-propellor repeats). - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001038 390.0
BYD3_k127_3513358_1 metal-dependent hydrolase with the TIM-barrel fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001262 319.0
BYD3_k127_3513358_10 SpoVT / AbrB like domain - - - 0.000000000000001269 79.0
BYD3_k127_3513358_11 - - - - 0.0000000003156 66.0
BYD3_k127_3513358_12 Protein of unknown function (DUF3738) - - - 0.00000000207 63.0
BYD3_k127_3513358_13 BlaR1 peptidase M56 - - - 0.000000003589 66.0
BYD3_k127_3513358_14 - - - - 0.00000002548 62.0
BYD3_k127_3513358_15 - - - - 0.0001159 53.0
BYD3_k127_3513358_16 - - - - 0.0002042 49.0
BYD3_k127_3513358_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001065 289.0
BYD3_k127_3513358_3 hydroperoxide reductase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000005033 227.0
BYD3_k127_3513358_4 Protein of unknown function (DUF1684) K09164 - - 0.000000000000000000000000000000000000000000000000000000001704 211.0
BYD3_k127_3513358_5 PIN domain - - - 0.000000000000000000000000000000000000000000000000005605 186.0
BYD3_k127_3513358_6 PFAM Penicillinase repressor - - - 0.000000000000000000000000000000000000001837 151.0
BYD3_k127_3513358_7 - - - - 0.0000000000000000000000000000000002084 143.0
BYD3_k127_3513358_8 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000001843 139.0
BYD3_k127_3513358_9 hydroperoxide reductase activity - - - 0.00000000000000000001339 95.0
BYD3_k127_3581804_0 Belongs to the transketolase family K00615 - 2.2.1.1 7.432e-224 711.0
BYD3_k127_3581804_1 Belongs to the aldehyde dehydrogenase family K00128,K22187 - 1.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003409 611.0
BYD3_k127_3581804_10 GDP-mannose 4,6 dehydratase K01784,K02473 - 5.1.3.2,5.1.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001546 441.0
BYD3_k127_3581804_11 Thiazole biosynthesis protein ThiG K03149 GO:0003674,GO:0003824,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.8.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007165 383.0
BYD3_k127_3581804_12 cytidylyl-transferase K00983 - 2.7.7.43 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004822 351.0
BYD3_k127_3581804_13 Dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001606 343.0
BYD3_k127_3581804_14 Glycosyl transferase family 2 K20534 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006052 313.0
BYD3_k127_3581804_15 PFAM Glycosyl transferase family 4 K02851 - 2.7.8.33,2.7.8.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002266 308.0
BYD3_k127_3581804_16 PFAM Bacterial transferase hexapeptide (three repeats) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000824 293.0
BYD3_k127_3581804_17 Fad dependent oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005725 261.0
BYD3_k127_3581804_18 Glycosyl transferase family group 2 K07011 - - 0.000000000000000000000000000000000000000000000000000000000000008046 230.0
BYD3_k127_3581804_19 Bacterial transferase hexapeptide (six repeats) - - - 0.00000000000000000000000000000000000000000000000000000000000001355 218.0
BYD3_k127_3581804_2 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K13015 - 1.1.1.136 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001532 577.0
BYD3_k127_3581804_20 haloacid dehalogenase-like hydrolase - - - 0.000000000000000000000000000000000000000000000000000000002287 208.0
BYD3_k127_3581804_21 transferase activity, transferring glycosyl groups - - - 0.000000000000000000000000000000000000000000000000003024 196.0
BYD3_k127_3581804_22 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 - 1.1.1.133 0.0000000000000000000000000000000000000000000000001189 188.0
BYD3_k127_3581804_23 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000000000000000000006771 180.0
BYD3_k127_3581804_24 - - - - 0.000000000000000000000000000000000000005809 158.0
BYD3_k127_3581804_25 - - - - 0.00000000000000000000000000000000000001873 156.0
BYD3_k127_3581804_26 Transport permease protein - - - 0.00000000000000000000000000000000004545 142.0
BYD3_k127_3581804_27 Psort location CytoplasmicMembrane, score - - - 0.0000000000000000000000000000004528 143.0
BYD3_k127_3581804_28 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000002313 136.0
BYD3_k127_3581804_3 UDP-N-acetylglucosamine 2-epimerase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004392 581.0
BYD3_k127_3581804_31 ribosomal protein - - - 0.000000000000000000003071 97.0
BYD3_k127_3581804_33 - - - - 0.00000000000000003055 96.0
BYD3_k127_3581804_34 - - - - 0.00000000000000003072 94.0
BYD3_k127_3581804_35 - - - - 0.0000000000000004383 90.0
BYD3_k127_3581804_36 ThiS family K03154 - - 0.0000000000008281 70.0
BYD3_k127_3581804_37 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) - - - 0.00000000001525 78.0
BYD3_k127_3581804_38 RfaE bifunctional protein - - - 0.00000000001798 76.0
BYD3_k127_3581804_39 PFAM methyltransferase - - - 0.000000009637 67.0
BYD3_k127_3581804_4 Pyridine nucleotide-disulphide oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001091 523.0
BYD3_k127_3581804_40 Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC - - - 0.000003304 61.0
BYD3_k127_3581804_41 Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC - - - 0.0001461 54.0
BYD3_k127_3581804_5 COGs COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002442 509.0
BYD3_k127_3581804_6 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005906 494.0
BYD3_k127_3581804_7 synthase K01654 - 2.5.1.56 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002321 491.0
BYD3_k127_3581804_8 DegT/DnrJ/EryC1/StrS aminotransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001183 507.0
BYD3_k127_3581804_9 Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose K01711 - 4.2.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001446 476.0
BYD3_k127_3596492_0 potassium ion transport K07085 - - 1.044e-253 796.0
BYD3_k127_3596492_1 Aminotransferase class I and II K09758 - 4.1.1.12 1.304e-251 786.0
BYD3_k127_3596492_10 - - - - 0.0000000000000000000000000000000000000007145 159.0
BYD3_k127_3596492_11 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000001661 152.0
BYD3_k127_3596492_12 - - - - 0.00000000000000000000000000001374 122.0
BYD3_k127_3596492_13 - - - - 0.000000000000000000000000000202 118.0
BYD3_k127_3596492_14 DNA-templated transcription, initiation K03088 - - 0.0000000000000000000000000002787 125.0
BYD3_k127_3596492_15 PFAM RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) - - - 0.00000000000000000000000004665 109.0
BYD3_k127_3596492_16 Two component, sigma54 specific, transcriptional regulator, Fis family K02667 - - 0.000000000000000000002603 102.0
BYD3_k127_3596492_17 - - - - 0.00000000000000000006785 94.0
BYD3_k127_3596492_19 - - - - 0.00000000000000005885 92.0
BYD3_k127_3596492_2 Aminomethyltransferase folate-binding domain K15064 - - 1.302e-206 651.0
BYD3_k127_3596492_21 Helix-turn-helix domain - - - 0.000003303 59.0
BYD3_k127_3596492_3 ABC transporter C-terminal domain K06158 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000295 623.0
BYD3_k127_3596492_4 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001795 473.0
BYD3_k127_3596492_5 Bacterial regulatory protein, Fis family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006118 430.0
BYD3_k127_3596492_6 Amino acid permease K03294 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001009 321.0
BYD3_k127_3596492_7 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 - 3.4.25.2 0.0000000000000000000000000000000000000000000000000000000000000000000004356 241.0
BYD3_k127_3596492_8 PFAM ATP-binding region, ATPase domain protein K02668,K07708,K07709 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000001699 206.0
BYD3_k127_3596492_9 - - - - 0.000000000000000000000000000000000000000000000000000003937 202.0
BYD3_k127_3614758_0 xanthine dehydrogenase activity - - - 0.0 1074.0
BYD3_k127_3614758_1 [2Fe-2S] binding domain K07302 - 1.3.99.16 0.000000000000000000000000000000000000000000000000000003091 198.0
BYD3_k127_362335_0 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K13924 - 2.1.1.80,3.1.1.61 2.869e-266 876.0
BYD3_k127_362335_1 ATPase associated with various cellular activities, AAA_5 K09882 - 6.6.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002665 483.0
BYD3_k127_362335_10 - - - - 0.00000000000000000000000000000000000000000000000000006692 198.0
BYD3_k127_362335_11 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000002795 192.0
BYD3_k127_362335_12 - - - - 0.00000000000000000000000000000000000000000000002041 184.0
BYD3_k127_362335_13 - - - - 0.00000000000000000000001015 111.0
BYD3_k127_362335_14 Domain of Unknown Function (DUF1080) - - - 0.0002309 48.0
BYD3_k127_362335_2 FMN binding K00104,K16422 - 1.1.3.15,1.1.3.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002905 459.0
BYD3_k127_362335_3 glutathionylspermidine amidase activity K01460 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008884,GO:0008885,GO:0016787,GO:0016810,GO:0016811,GO:0016874,GO:0016879,GO:0016880,GO:0044424,GO:0044444,GO:0044464 3.5.1.78,6.3.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003641 394.0
BYD3_k127_362335_4 COG4547 Cobalamin biosynthesis protein CobT (nicotinate-mononucleotide 5, 6-dimethylbenzimidazole phosphoribosyltransferase) K09883 - 6.6.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001731 385.0
BYD3_k127_362335_5 Glucose / Sorbosone dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001834 338.0
BYD3_k127_362335_6 MOSC domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000008115 241.0
BYD3_k127_362335_7 - - - - 0.00000000000000000000000000000000000000000000000000000000000003596 222.0
BYD3_k127_362335_8 - - - - 0.0000000000000000000000000000000000000000000000000000001686 206.0
BYD3_k127_362335_9 Redoxin K03564 - 1.11.1.15 0.000000000000000000000000000000000000000000000000000002782 197.0
BYD3_k127_3634371_0 enterobactin catabolic process K07214,K09689 - 3.6.3.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005231 518.0
BYD3_k127_3634371_1 ribosylpyrimidine nucleosidase activity - - - 0.00000000000000000000008987 105.0
BYD3_k127_366009_0 Protein of unknown function (DUF559) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002484 496.0
BYD3_k127_366009_1 PFAM Band 7 protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004165 440.0
BYD3_k127_366009_2 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K01563,K11991 - 3.5.4.33,3.8.1.5 0.0000000000000000000000000000000000000000000001337 171.0
BYD3_k127_366009_3 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K07025 - - 0.00000000000000000000000000000006595 136.0
BYD3_k127_366009_4 cellular response to DNA damage stimulus K07340 - - 0.000000000000000000000000321 111.0
BYD3_k127_366009_5 - K02172 - - 0.0000000001118 71.0
BYD3_k127_3686748_0 Dehydrogenase E1 component K11381 - 1.2.4.4 3.29e-270 850.0
BYD3_k127_3686748_1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain K07516 - 1.1.1.35 1.922e-234 747.0
BYD3_k127_3686748_10 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000197 371.0
BYD3_k127_3686748_11 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002615 360.0
BYD3_k127_3686748_12 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001751 327.0
BYD3_k127_3686748_13 Amidinotransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004334 318.0
BYD3_k127_3686748_14 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003406 308.0
BYD3_k127_3686748_15 aromatic amino acid beta-eliminating lyase threonine aldolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003686 312.0
BYD3_k127_3686748_16 Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001618 280.0
BYD3_k127_3686748_17 PFAM glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006303 273.0
BYD3_k127_3686748_18 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 - 2.1.1.199 0.000000000000000000000000000000000000000000000000000000000000000000000000000007048 270.0
BYD3_k127_3686748_19 PFAM ABC transporter related K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000105 258.0
BYD3_k127_3686748_2 PFAM Acyl-CoA dehydrogenase, C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002943 573.0
BYD3_k127_3686748_20 MMPL family K07003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000022 271.0
BYD3_k127_3686748_21 Major Facilitator Superfamily K08223 - - 0.000000000000000000000000000000000000000000000000000000001882 216.0
BYD3_k127_3686748_22 Transglutaminase-like superfamily - - - 0.000000000000000000000000000000000000000000000000003444 192.0
BYD3_k127_3686748_23 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000693 181.0
BYD3_k127_3686748_24 hydrolase of the alpha beta K07018 - - 0.00000000000000000000000000000000000000000001806 171.0
BYD3_k127_3686748_25 Rhomboid family - - - 0.00000000000000000000000000000000000000000008593 171.0
BYD3_k127_3686748_26 TIGRFAM HAD-superfamily hydrolase, subfamily IA, variant 3 K01838 - 5.4.2.6 0.00000000000000000000000000000000000000001412 163.0
BYD3_k127_3686748_27 Belongs to the MraZ family K03925 - - 0.00000000000000000000000000000000000004 147.0
BYD3_k127_3686748_28 Protein of unknown function (DUF1684) K09164 - - 0.000000000000000000000000000000000002766 145.0
BYD3_k127_3686748_29 PFAM Cupin 2, conserved barrel - - - 0.0000000000000000000000000000000009994 132.0
BYD3_k127_3686748_3 COG0624, acetylornithine deacetylase succinyl-diaminopimelate desuccinylase and related deacylases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004545 536.0
BYD3_k127_3686748_30 Yqey-like protein K09117 - - 0.000000000000000000000000000000005286 134.0
BYD3_k127_3686748_31 ABC-2 family transporter protein - - - 0.000000000000000000000000003577 128.0
BYD3_k127_3686748_32 Acetyltransferase (GNAT) domain - - - 0.000000000000000000007324 104.0
BYD3_k127_3686748_33 - - - - 0.00000000000000007055 88.0
BYD3_k127_3686748_34 - - - - 0.00000002507 66.0
BYD3_k127_3686748_35 Alpha/beta hydrolase family K22250 - 3.1.1.76 0.0000001967 63.0
BYD3_k127_3686748_36 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic - - - 0.0001739 50.0
BYD3_k127_3686748_37 Type II secretory pathway, component HofQ K02666 - - 0.0008033 50.0
BYD3_k127_3686748_4 Belongs to the thiolase family K00632 - 2.3.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001836 497.0
BYD3_k127_3686748_5 PFAM NAD-dependent epimerase dehydratase K01784 - 5.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007509 437.0
BYD3_k127_3686748_6 PFAM NAD-dependent epimerase dehydratase K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000423 429.0
BYD3_k127_3686748_7 acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928,K15792 - 6.3.2.10,6.3.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000521 419.0
BYD3_k127_3686748_8 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008616 396.0
BYD3_k127_3686748_9 Penicillin-binding protein, dimerisation domain K03587 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001689 411.0
BYD3_k127_372271_0 MacB-like periplasmic core domain - - - 4.824e-279 884.0
BYD3_k127_372271_1 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004875 457.0
BYD3_k127_372271_10 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.0004358 51.0
BYD3_k127_372271_2 RibD C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001457 332.0
BYD3_k127_372271_3 Cell wall hydrolase - - - 0.000000000000000000000000000000000000000000000000003665 185.0
BYD3_k127_372271_4 Transcriptional regulator PadR-like family - - - 0.0000000000000000000000000000000000000000005349 160.0
BYD3_k127_372271_5 Transcriptional regulator PadR-like family - - - 0.000000000000000000000000000000000000005375 150.0
BYD3_k127_372271_6 Domain present in PSD-95, Dlg, and ZO-1/2. - - - 0.0000000000000000000000000000000000000996 158.0
BYD3_k127_372271_7 DNA ligase D, 3'-phosphoesterase domain - - - 0.000000000005849 67.0
BYD3_k127_372271_8 Cupin domain - - - 0.000000009807 65.0
BYD3_k127_372271_9 Cupin domain - - - 0.00000002378 64.0
BYD3_k127_3738271_0 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K01953 - 6.3.5.4 3.29e-237 754.0
BYD3_k127_3738271_1 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007803 482.0
BYD3_k127_3738271_10 Protein involved in cellulose biosynthesis - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004021 294.0
BYD3_k127_3738271_11 Polysaccharide biosynthesis protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001318 275.0
BYD3_k127_3738271_12 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004838 269.0
BYD3_k127_3738271_13 transferase activity, transferring glycosyl groups - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002586 262.0
BYD3_k127_3738271_14 dTDP-4-dehydrorhamnose reductase activity K00067 - 1.1.1.133 0.0000000000000000000000000000000000000000000000000000000000000000000000001662 259.0
BYD3_k127_3738271_15 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001764 269.0
BYD3_k127_3738271_16 PFAM polysaccharide biosynthesis protein K03328 - - 0.00000000000000000000000000000000000000000000000000000000000000000000008636 260.0
BYD3_k127_3738271_17 Glycosyltransferase Family 4 - - - 0.00000000000000000000000000000000000000000000000000000000000000000001096 250.0
BYD3_k127_3738271_18 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000111 229.0
BYD3_k127_3738271_19 Glycosyltransferase family 9 (heptosyltransferase) K02843 - - 0.0000000000000000000000000000000000000000000000000000000000003555 222.0
BYD3_k127_3738271_2 PFAM oxidoreductase domain protein K13020 - 1.1.1.335 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004454 429.0
BYD3_k127_3738271_20 O-antigen ligase like membrane protein - - - 0.000000000000000000000000000000000000000000000000000000000003569 226.0
BYD3_k127_3738271_21 Lipopolysaccharide biosynthesis protein - - - 0.0000000000000000000000000000000000000000000000000000000002526 224.0
BYD3_k127_3738271_22 - - - - 0.000000000000000000000000000000000000000000000000000000007505 211.0
BYD3_k127_3738271_23 AAA domain - - - 0.00000000000000000000000000000000000000000000000000000002458 210.0
BYD3_k127_3738271_24 Hexapeptide repeat of succinyl-transferase - - - 0.0000000000000000000000000000000000000000000000000000006733 200.0
BYD3_k127_3738271_25 4-amino-4-deoxy-alpha-L-arabinopyranosyl undecaprenyl phosphate biosynthetic process K22278 - 3.5.1.104 0.00000000000000000000000000000000000000000000000001119 199.0
BYD3_k127_3738271_26 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000001857 175.0
BYD3_k127_3738271_27 rRNA (adenine-N6,N6-)-dimethyltransferase activity K00561,K02528 - 2.1.1.182,2.1.1.184 0.0000000000000000000000000000000000000000001509 169.0
BYD3_k127_3738271_28 COG0489 ATPases involved in chromosome partitioning K00903 - 2.7.10.2 0.00000000000000000000000000000001206 140.0
BYD3_k127_3738271_29 Highly conserved protein containing a thioredoxin domain - - - 0.00000000000000000000000000001448 133.0
BYD3_k127_3738271_3 polysaccharide deacetylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001769 426.0
BYD3_k127_3738271_30 Belongs to the glycosyl hydrolase 11 (cellulase G) family K01181 GO:0005575,GO:0016020 3.2.1.8 0.00000000000000005194 92.0
BYD3_k127_3738271_31 PFAM methyltransferase - - - 0.0000000000000001024 92.0
BYD3_k127_3738271_32 metallopeptidase activity - - - 0.00000003441 66.0
BYD3_k127_3738271_33 cellulase activity K20276 - - 0.0000000479 64.0
BYD3_k127_3738271_34 Glycosyltransferase Family 4 - - - 0.000004438 59.0
BYD3_k127_3738271_35 Glucose / Sorbosone dehydrogenase - - - 0.00005749 55.0
BYD3_k127_3738271_36 cellulase activity K01181 - 3.2.1.8 0.0003556 52.0
BYD3_k127_3738271_37 ubiE/COQ5 methyltransferase family - - - 0.0003606 51.0
BYD3_k127_3738271_4 Polysaccharide biosynthesis protein K17716 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003206 400.0
BYD3_k127_3738271_5 Belongs to the DegT DnrJ EryC1 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002321 392.0
BYD3_k127_3738271_6 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002751 374.0
BYD3_k127_3738271_7 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose K03272 - 2.7.1.167,2.7.7.70 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005239 326.0
BYD3_k127_3738271_8 undecaprenyl-phosphate glucose phosphotransferase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002389 310.0
BYD3_k127_3738271_9 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005563 319.0
BYD3_k127_3792488_0 Phenylalanine-4-hydroxylase K00500 GO:0003674,GO:0003824,GO:0004497,GO:0004505,GO:0006082,GO:0006520,GO:0006558,GO:0006559,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009072,GO:0009074,GO:0009987,GO:0016054,GO:0016491,GO:0016705,GO:0016714,GO:0017144,GO:0019439,GO:0019752,GO:0042737,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0046395,GO:0055114,GO:0071704,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606,GO:1902221,GO:1902222 1.14.16.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000499 406.0
BYD3_k127_3792488_2 - - - - 0.00000000000000000000000000000000000000000001815 173.0
BYD3_k127_3792488_3 - - - - 0.000000000000000000005707 97.0
BYD3_k127_3792488_4 carboxymuconolactone decarboxylase K01607 - 4.1.1.44 0.000000000000002225 84.0
BYD3_k127_3792488_6 Type VI secretion system VasI, EvfG, VC_A0118 K11909 - - 0.0002817 52.0
BYD3_k127_3812496_0 phosphoprotein phosphatase activity - - - 0.000000000000000000000000000000000000000000000000000000000000008103 229.0
BYD3_k127_3823056_0 Asparagine synthase, glutamine-hydrolyzing K01953 - 6.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002498 530.0
BYD3_k127_3823056_1 Bacterial regulatory protein, Fis family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004202 458.0
BYD3_k127_3823056_10 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000002314 172.0
BYD3_k127_3823056_11 Capsular exopolysaccharide family K08252 - 2.7.10.1 0.00000000000000000000000000000000007288 150.0
BYD3_k127_3823056_12 PFAM Polysaccharide export protein K01991 - - 0.000000000000000000000000000293 123.0
BYD3_k127_3823056_13 Chain-length determining protein - - - 0.00000000001736 77.0
BYD3_k127_3823056_14 O-antigen ligase like membrane protein - - - 0.0000000001322 75.0
BYD3_k127_3823056_15 Bacterial regulatory protein, Fis family - - - 0.0000000002149 65.0
BYD3_k127_3823056_16 TIGRFAM PEP-CTERM system associated protein - - - 0.00007423 55.0
BYD3_k127_3823056_2 PFAM Glycosyl transferase, group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007626 293.0
BYD3_k127_3823056_3 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000007845 256.0
BYD3_k127_3823056_4 Heparinase II/III N-terminus - - - 0.00000000000000000000000000000000000000000000000000000000000000002868 248.0
BYD3_k127_3823056_5 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000000000000000000121 240.0
BYD3_k127_3823056_6 Belongs to the DegT DnrJ EryC1 family - - - 0.000000000000000000000000000000000000000000000000000000000001155 233.0
BYD3_k127_3823056_7 Polysaccharide biosynthesis protein - - - 0.000000000000000000000000000000000000000000000000000002845 211.0
BYD3_k127_3823056_8 Glycosyltransferase Family 4 - - - 0.00000000000000000000000000000000000000000000000009186 192.0
BYD3_k127_3823056_9 PFAM Polysaccharide deacetylase - - - 0.00000000000000000000000000000000000000000000003324 186.0
BYD3_k127_3850818_0 DNA topological change K03168 - 5.99.1.2 8.275e-207 673.0
BYD3_k127_3850818_1 Belongs to the formate--tetrahydrofolate ligase family K01938 - 6.3.4.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000121 604.0
BYD3_k127_3850818_10 ATPases associated with a variety of cellular activities K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005074 288.0
BYD3_k127_3850818_11 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001304 272.0
BYD3_k127_3850818_12 Ankyrin repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000001186 249.0
BYD3_k127_3850818_13 flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase K07006 - - 0.00000000000000000000000000000000000000000000000000000000000000001078 229.0
BYD3_k127_3850818_14 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000008712 190.0
BYD3_k127_3850818_15 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000006624 177.0
BYD3_k127_3850818_16 Calcium/calmodulin dependent protein kinase II association domain - - - 0.000000000000000000000000000000000000000000324 164.0
BYD3_k127_3850818_17 Hep Hag repeat protein - - - 0.00000000000000000000000000000000000000008254 175.0
BYD3_k127_3850818_18 - - - - 0.0000000000000000000000000000000000000005924 166.0
BYD3_k127_3850818_19 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000002532 135.0
BYD3_k127_3850818_2 Dynamin family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002709 513.0
BYD3_k127_3850818_20 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses - - - 0.000000000000000000000000000002925 141.0
BYD3_k127_3850818_21 membrane - - - 0.0000000000000000000000003237 114.0
BYD3_k127_3850818_22 - - - - 0.0000000000000000000000008488 108.0
BYD3_k127_3850818_23 Had-superfamily hydrolase, subfamily ia, variant 1 K07025,K08723 - 3.1.3.5 0.0000000000000002497 89.0
BYD3_k127_3850818_25 PFAM SMP-30 Gluconolaconase - - - 0.00000000000004166 87.0
BYD3_k127_3850818_26 domain protein K01992 - - 0.0000000000001326 83.0
BYD3_k127_3850818_27 membrane - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000004132 74.0
BYD3_k127_3850818_3 Belongs to the pirin family K06911 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002264 456.0
BYD3_k127_3850818_4 PQQ-like domain K17760 - 1.1.9.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001982 434.0
BYD3_k127_3850818_5 Protein of unknown function (DUF1552) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003381 382.0
BYD3_k127_3850818_6 acr, cog1565 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002601 321.0
BYD3_k127_3850818_7 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation K00549 - 2.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005814 313.0
BYD3_k127_3850818_8 Histone methylation protein DOT1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001091 304.0
BYD3_k127_3850818_9 LytTr DNA-binding domain K02477 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002469 297.0
BYD3_k127_3863174_0 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012,K00066 - 1.1.1.132,1.1.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001214 416.0
BYD3_k127_3863174_1 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor K00162,K21417 - 1.2.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003569 393.0
BYD3_k127_3863174_2 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00161,K21416 - 1.2.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004547 327.0
BYD3_k127_3863174_3 Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction K02377 - 1.1.1.271 0.000000000000000000000000000000000006985 139.0
BYD3_k127_3863174_4 Protein conserved in bacteria - - - 0.0000000000004896 83.0
BYD3_k127_3903026_0 PQQ enzyme repeat K00117 - 1.1.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001199 597.0
BYD3_k127_3903026_1 PQQ-like domain K00117 - 1.1.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009446 544.0
BYD3_k127_3903026_2 arylsulfatase activity K01132 - 3.1.6.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002064 317.0
BYD3_k127_3903026_3 serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000001089 224.0
BYD3_k127_3903026_4 PFAM Glycosyl transferase, group 1 - - - 0.000000000000000000000000000000000000000000000000000001898 217.0
BYD3_k127_3903026_5 - K02172 - - 0.0000000000000000000000000000000002367 143.0
BYD3_k127_3903026_6 - - - - 0.00000000000000000000000000004687 130.0
BYD3_k127_3903026_7 Prolyl 4-hydroxylase alpha subunit homologues. - - - 0.00000000000000000000000000005071 123.0
BYD3_k127_3903026_8 - - - - 0.00000000000000000000000005001 122.0
BYD3_k127_3903026_9 - - - - 0.0000000000009093 75.0
BYD3_k127_3937153_0 Belongs to the glycosyl hydrolase 43 family K06113 - 3.2.1.99 1.571e-206 654.0
BYD3_k127_3937153_1 cephalosporin-C deacetylase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001178 285.0
BYD3_k127_3937153_2 Bacterial transcriptional regulator K13641 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000006085 254.0
BYD3_k127_3937153_3 Cupin domain - - - 0.00000000000000000000000000000000000000000000000000001818 196.0
BYD3_k127_3937153_4 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000000000000000000175 144.0
BYD3_k127_3947793_0 response to abiotic stimulus K06867 - - 0.00000000000000000007402 101.0
BYD3_k127_3947793_1 Tetratricopeptide repeat - - - 0.00004968 51.0
BYD3_k127_3982566_0 MacB-like periplasmic core domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003841 491.0
BYD3_k127_3982566_1 Transcriptional regulator PadR-like family - - - 0.00000000000000000000000000000000000002581 146.0
BYD3_k127_4024411_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K07303 - 1.3.99.16 5.256e-247 788.0
BYD3_k127_4024411_1 Common central domain of tyrosinase K00505 - 1.14.18.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003659 461.0
BYD3_k127_4024411_10 Protein of unknown function (DUF3565) - - - 0.0000000000000000000001161 105.0
BYD3_k127_4024411_11 Glyoxalase-like domain - - - 0.0000000000000000000001868 109.0
BYD3_k127_4024411_12 Histidine phosphatase superfamily (branch 1) - - - 0.000000000000000000001446 103.0
BYD3_k127_4024411_13 PFAM GCN5-related N-acetyltransferase - - - 0.000000000000000000009366 96.0
BYD3_k127_4024411_14 - - - - 0.0000000000000000000108 98.0
BYD3_k127_4024411_15 transcriptional regulator containing an HTH domain fused to a Zn-ribbon K07743 - - 0.000000000000002859 78.0
BYD3_k127_4024411_16 - - - - 0.00000000003637 68.0
BYD3_k127_4024411_17 Metallo-beta-lactamase superfamily - - - 0.000000001695 69.0
BYD3_k127_4024411_18 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - - - 0.00000004477 57.0
BYD3_k127_4024411_19 Low affinity iron permease - - - 0.00000726 56.0
BYD3_k127_4024411_2 Dienelactone hydrolase family K01061 - 3.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002548 352.0
BYD3_k127_4024411_20 ACT domain - - - 0.00001535 53.0
BYD3_k127_4024411_21 glyoxalase bleomycin resistance protein dioxygenase - - - 0.0003578 52.0
BYD3_k127_4024411_3 2Fe-2S -binding domain protein K07302 - 1.3.99.16 0.000000000000000000000000000000000000000000000000000000000000000000003022 239.0
BYD3_k127_4024411_4 DNA-templated transcription, initiation K03088 - - 0.00000000000000000000000000000000000000001236 159.0
BYD3_k127_4024411_5 SMP-30/Gluconolaconase/LRE-like region - - - 0.0000000000000000000000000000000006814 145.0
BYD3_k127_4024411_6 - - - - 0.000000000000000000000000000000005563 131.0
BYD3_k127_4024411_7 - - - - 0.00000000000000000000000002155 121.0
BYD3_k127_4024411_8 - - - - 0.00000000000000000000000009541 118.0
BYD3_k127_4024411_9 - - - - 0.000000000000000000000005704 109.0
BYD3_k127_4143567_0 alpha-L-arabinofuranosidase domain protein K01209 - 3.2.1.55 1.508e-229 716.0
BYD3_k127_4143567_1 cytochrome C peroxidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008379 504.0
BYD3_k127_4143567_10 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000001872 150.0
BYD3_k127_4143567_11 - - - - 0.0000000000000000005189 98.0
BYD3_k127_4143567_12 - - - - 0.000000000000000001079 98.0
BYD3_k127_4143567_13 - - - - 0.0000000005228 66.0
BYD3_k127_4143567_14 - - - - 0.00000002236 61.0
BYD3_k127_4143567_15 - - - - 0.0000002756 63.0
BYD3_k127_4143567_2 Converts alpha-aldose to the beta-anomer K01785 - 5.1.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000339 485.0
BYD3_k127_4143567_4 eRF1 domain 3 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002821 278.0
BYD3_k127_4143567_5 Bacterial regulatory helix-turn-helix protein, lysR family K14657 - - 0.00000000000000000000000000000000000000000000000000000000000000004697 234.0
BYD3_k127_4143567_6 LysR substrate binding domain K05817 - - 0.0000000000000000000000000000000000000000000000000000000003321 214.0
BYD3_k127_4143567_7 Metallo-beta-lactamase superfamily K17837 - 3.5.2.6 0.00000000000000000000000000000000000000000000000006994 190.0
BYD3_k127_4143567_8 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000001323 184.0
BYD3_k127_4143567_9 PFAM L-carnitine dehydratase bile acid-inducible protein F - - - 0.000000000000000000000000000000000000002841 149.0
BYD3_k127_4160780_0 ABC transporter transmembrane region K06147,K18893 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001458 455.0
BYD3_k127_4160780_1 Peptidase M56, BlaR1 - - - 0.000000000000000000000000000000000001391 151.0
BYD3_k127_4160780_2 STAS domain - - - 0.0000000004015 66.0
BYD3_k127_4160780_3 ATPases associated with a variety of cellular activities - - - 0.0004207 45.0
BYD3_k127_4228752_0 nitrite transmembrane transporter activity - - - 1.751e-238 754.0
BYD3_k127_4228752_1 pyrroloquinoline quinone binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008155 555.0
BYD3_k127_4228752_10 Universal stress protein family - - - 0.0000000000000000000000003508 120.0
BYD3_k127_4228752_11 - - - - 0.000000000000000003197 93.0
BYD3_k127_4228752_12 TIGRFAM TonB K03832 - - 0.000000000000003073 85.0
BYD3_k127_4228752_13 Domain of unknown function (DUF4136) - - - 0.00000000000009916 79.0
BYD3_k127_4228752_14 - - - - 0.0000000000004032 79.0
BYD3_k127_4228752_15 Domain of unknown function (DUF4136) - - - 0.00000000006684 71.0
BYD3_k127_4228752_16 - - - - 0.0000000008937 66.0
BYD3_k127_4228752_2 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001284 328.0
BYD3_k127_4228752_3 Belongs to the LOG family K06966 - 3.2.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000204 289.0
BYD3_k127_4228752_4 Helix-hairpin-helix domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002497 269.0
BYD3_k127_4228752_5 Nitroreductase family - - - 0.00000000000000000000000000000000000000000000000003246 187.0
BYD3_k127_4228752_6 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000000000000000000000001371 134.0
BYD3_k127_4228752_7 Universal stress protein family - - - 0.000000000000000000000000000000553 136.0
BYD3_k127_4228752_8 - - - - 0.000000000000000000000000000003734 125.0
BYD3_k127_4228752_9 Belongs to the universal stress protein A family - - - 0.00000000000000000000000000004311 128.0
BYD3_k127_4233841_0 TIGRFAM ribonuclease, Rne Rng family K08300,K08301 - 3.1.26.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009116 501.0
BYD3_k127_4233841_1 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000155 301.0
BYD3_k127_4233841_2 Penicillin-binding Protein dimerisation domain K05515 - 3.4.16.4 0.00000000000000000006133 96.0
BYD3_k127_4233841_3 - K02172 - - 0.000001583 59.0
BYD3_k127_4235396_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 9.195e-225 702.0
BYD3_k127_4235396_1 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004998 543.0
BYD3_k127_4235396_10 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001111 295.0
BYD3_k127_4235396_11 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.00000000000000000000000000000000000000000000000000000000000168 212.0
BYD3_k127_4235396_12 riboflavin synthase, alpha K00793 - 2.5.1.9 0.0000000000000000000000000000000000000002677 156.0
BYD3_k127_4235396_13 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 GO:0003674,GO:0005488,GO:0005515,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008150,GO:0009987,GO:0010033,GO:0035966,GO:0042221,GO:0043167,GO:0043169,GO:0046872,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0061077 - 0.0000000000000000000000000000000000002366 143.0
BYD3_k127_4235396_14 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.000000000000000000000000000000000006064 150.0
BYD3_k127_4235396_15 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000001526 136.0
BYD3_k127_4235396_16 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.0000000000000000000000002069 113.0
BYD3_k127_4235396_17 Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG) K01095 - 3.1.3.27 0.000000000000000000000001207 109.0
BYD3_k127_4235396_18 Sigma-70, region 4 K03088 - - 0.000000000000000001006 93.0
BYD3_k127_4235396_19 Bacterial regulatory protein, Fis family - - - 0.000000000008733 70.0
BYD3_k127_4235396_2 Two component, sigma54 specific, transcriptional regulator, Fis family K13599 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000109 510.0
BYD3_k127_4235396_20 23S rRNA-intervening sequence protein - - - 0.0000000000127 74.0
BYD3_k127_4235396_21 RDD family - - - 0.0000001434 63.0
BYD3_k127_4235396_3 histidine kinase HAMP region domain protein K13598 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001075 447.0
BYD3_k127_4235396_4 SAICAR synthetase K01923,K13713 - 6.3.2.6,6.3.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007276 395.0
BYD3_k127_4235396_5 Belongs to the HpcH HpaI aldolase family K02510 - 4.1.2.52 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001535 336.0
BYD3_k127_4235396_6 Formiminotransferase domain K00603,K01746,K13990 - 2.1.2.5,4.3.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004578 319.0
BYD3_k127_4235396_7 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) K03110 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002834 317.0
BYD3_k127_4235396_8 Belongs to the CinA family K03742 - 3.5.1.42 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002479 324.0
BYD3_k127_4235396_9 NAD-dependent glycerol-3-phosphate dehydrogenase domain protein K00057 - 1.1.1.94 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007597 316.0
BYD3_k127_424308_0 POT family K03305 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000495 596.0
BYD3_k127_424308_1 NADH dehydrogenase, FAD-containing subunit K03885 - 1.6.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000105 486.0
BYD3_k127_424308_10 ATPase activity K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000008024 245.0
BYD3_k127_424308_11 Surface antigen K07277 - - 0.00000000000000000000000000000000000000000000000000000000000000000001513 256.0
BYD3_k127_424308_12 Protein of unknown function DUF72 - - - 0.0000000000000000000000000000000000000000000000000000000000000000005264 235.0
BYD3_k127_424308_13 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000001991 242.0
BYD3_k127_424308_14 Peptidase M56, BlaR1 - - - 0.00000000000000000000000000000000000000000000000000000000000005909 236.0
BYD3_k127_424308_15 DNA ligase K01971 - 6.5.1.1 0.0000000000000000000000000000000000000000000000000000000004583 211.0
BYD3_k127_424308_16 Uncharacterised protein family UPF0052 - - - 0.000000000000000000000000000000000000000000000000000002177 206.0
BYD3_k127_424308_17 Copper binding periplasmic protein CusF K07152 - - 0.00000000000000000000000000000000000000000000000001622 190.0
BYD3_k127_424308_18 LemA family K03744 - - 0.0000000000000000000000000000000000000000000000001608 187.0
BYD3_k127_424308_19 DinB family - - - 0.00000000000000000000000000000000000000000000001167 179.0
BYD3_k127_424308_2 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003749 484.0
BYD3_k127_424308_20 - - - - 0.000000000000000000000000000000000000000000001124 174.0
BYD3_k127_424308_21 - K02172 - - 0.0000000000000000000000000000000004946 143.0
BYD3_k127_424308_22 transmembrane transport K01992 - - 0.00000000000000000000000000000004255 143.0
BYD3_k127_424308_23 Peptidase M56, BlaR1 - - - 0.00000000000000000000000000000004488 138.0
BYD3_k127_424308_24 TamB, inner membrane protein subunit of TAM complex K09800 - - 0.00000000000000000000000000000008143 146.0
BYD3_k127_424308_25 Protein of unknown function (DUF3738) - - - 0.00000000000000000000000000008727 126.0
BYD3_k127_424308_26 Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes - - - 0.000000000000000000000000004467 113.0
BYD3_k127_424308_27 Belongs to the ompA family K03286 - - 0.00000000000000000000002098 116.0
BYD3_k127_424308_28 TPM domain K06872 - - 0.0000000000000000000002372 107.0
BYD3_k127_424308_29 Penicillinase repressor - - - 0.0000000000000000000008328 100.0
BYD3_k127_424308_3 Elongator protein 3, MiaB family, Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005608 472.0
BYD3_k127_424308_30 Protein of unknown function (DUF3738) - - - 0.00000000000000000004939 99.0
BYD3_k127_424308_31 nucleotidyltransferase activity K00984,K19279 - 2.7.7.47 0.00000000000000004898 91.0
BYD3_k127_424308_32 - - - - 0.0000000000000003022 93.0
BYD3_k127_424308_33 Stress-induced bacterial acidophilic repeat motif - - - 0.0000000000000007041 80.0
BYD3_k127_424308_34 - - - - 0.000000000006984 68.0
BYD3_k127_424308_4 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001924 436.0
BYD3_k127_424308_5 ATP-grasp domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001131 394.0
BYD3_k127_424308_6 Eukaryotic DNA topoisomerase I, catalytic core K03168 - 5.99.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006071 393.0
BYD3_k127_424308_7 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 - 1.17.7.1,1.17.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002862 326.0
BYD3_k127_424308_8 Serine aminopeptidase, S33 K07019 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000125 291.0
BYD3_k127_424308_9 regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005098 286.0
BYD3_k127_4250691_0 High confidence in function and specificity - - - 2.592e-270 848.0
BYD3_k127_4250691_1 Domain of unknown function (DUF3459) K01236 - 3.2.1.141 2.4e-242 766.0
BYD3_k127_4250691_10 - - - - 0.0000000000002695 73.0
BYD3_k127_4250691_2 Uncharacterised protein family (UPF0182) K09118 - - 8.162e-230 743.0
BYD3_k127_4250691_3 protein-containing complex disassembly K02837,K07133 GO:0003674,GO:0003676,GO:0003723,GO:0003747,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0016150,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004285 591.0
BYD3_k127_4250691_4 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007214 511.0
BYD3_k127_4250691_5 tRNA pseudouridine synthase activity K06173 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000296 286.0
BYD3_k127_4250691_6 BAAT / Acyl-CoA thioester hydrolase C terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000006841 236.0
BYD3_k127_4250691_7 SurA N-terminal domain K03769 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000002642 220.0
BYD3_k127_4250691_8 WYL domain - - - 0.00000000000000000000000000000000000000000001065 177.0
BYD3_k127_4250691_9 Belongs to the HSP15 family K04762 - - 0.0000000000000002426 84.0
BYD3_k127_4264420_0 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 6.1.1.15 1.029e-203 645.0
BYD3_k127_4264420_1 response regulator K02667 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002715 461.0
BYD3_k127_4264420_10 Required for chromosome condensation and partitioning K03529 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002129 255.0
BYD3_k127_4264420_11 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.00000000000000000000000000000000000000000000000000000000000000000002036 241.0
BYD3_k127_4264420_12 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.00000000000000000000000000000000000000000000000000000002484 208.0
BYD3_k127_4264420_13 Member of the two-component regulatory system AtoS AtoC. In the presence of acetoacetate, AtoS AtoC stimulates the expression of the atoDAEB operon, leading to short chain fatty acid catabolism and activation of the poly-(R)-3-hydroxybutyrate (cPHB) biosynthetic pathway. Also induces the operon in response to spermidine. Involved in the regulation of motility and chemotaxis, via transcriptional induction of the flagellar regulon. AtoS is a membrane-associated kinase that phosphorylates and activates AtoC in response to environmental signals K07710 GO:0000155,GO:0000160,GO:0000166,GO:0003674,GO:0003824,GO:0004672,GO:0004673,GO:0005488,GO:0005524,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0007154,GO:0007165,GO:0008144,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016775,GO:0017076,GO:0018106,GO:0018193,GO:0018202,GO:0019538,GO:0023014,GO:0023052,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035556,GO:0035639,GO:0036094,GO:0036211,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0046777,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007,GO:0071704,GO:0071944,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564 2.7.13.3 0.00000000000000000000000000000000000000000003666 179.0
BYD3_k127_4264420_14 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000000000000000000001319 167.0
BYD3_k127_4264420_15 - - - - 0.000000000000000000000000000000000000004215 164.0
BYD3_k127_4264420_16 Tfp pilus assembly protein tip-associated adhesin K02674 - - 0.000000000000000000000000000000002078 151.0
BYD3_k127_4264420_17 23S rRNA-intervening sequence protein - - - 0.000000000000000000000003496 103.0
BYD3_k127_4264420_18 DinB family - - - 0.00000000000000004677 87.0
BYD3_k127_4264420_19 - - - - 0.00000000000003743 79.0
BYD3_k127_4264420_2 Bacterial regulatory protein, Fis family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004558 458.0
BYD3_k127_4264420_20 mttA/Hcf106 family K03116,K03117 - - 0.00000000000008382 76.0
BYD3_k127_4264420_21 Pfam:N_methyl_2 - - - 0.0000000000002658 78.0
BYD3_k127_4264420_22 Cysteine-rich CPXCG - - - 0.00000000001249 68.0
BYD3_k127_4264420_23 DSBA oxidoreductase - - - 0.0000000001072 74.0
BYD3_k127_4264420_24 COG0457 FOG TPR repeat - - - 0.0000004815 61.0
BYD3_k127_4264420_25 Type IV minor pilin ComP, DNA uptake sequence receptor K02650 - - 0.000042 52.0
BYD3_k127_4264420_26 pilus assembly protein PilW K02672 - - 0.00005593 56.0
BYD3_k127_4264420_27 S23 ribosomal protein - - - 0.00006424 50.0
BYD3_k127_4264420_28 type IV pilus modification protein PilV - - - 0.00009713 50.0
BYD3_k127_4264420_29 Type II transport protein GspH K08084 - - 0.0001993 51.0
BYD3_k127_4264420_3 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001596 456.0
BYD3_k127_4264420_4 Type II secretion system (T2SS), protein F K02455 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004942 426.0
BYD3_k127_4264420_5 Type II/IV secretion system protein K02669 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004241 372.0
BYD3_k127_4264420_6 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006702 348.0
BYD3_k127_4264420_7 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735 - 4.2.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001323 301.0
BYD3_k127_4264420_8 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002063 282.0
BYD3_k127_4264420_9 Sensor histidine kinase PilS, PAS domain-containing K02668,K07709 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000001363 286.0
BYD3_k127_4289082_0 WD40 domain protein beta Propeller K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002094 339.0
BYD3_k127_4289082_1 ADP binding - - - 0.000000000000000000002831 109.0
BYD3_k127_4289082_2 - - - - 0.0000000006747 63.0
BYD3_k127_4293844_0 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002932 268.0
BYD3_k127_4293844_1 Peptidase family M23 - GO:0000920,GO:0001896,GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0008219,GO:0009273,GO:0009314,GO:0009628,GO:0009987,GO:0012501,GO:0016020,GO:0016787,GO:0030288,GO:0030313,GO:0031975,GO:0032153,GO:0042221,GO:0042493,GO:0042546,GO:0042597,GO:0043085,GO:0044085,GO:0044093,GO:0044464,GO:0050790,GO:0050896,GO:0051301,GO:0051336,GO:0051345,GO:0065007,GO:0065009,GO:0071554,GO:0071840,GO:0071944 - 0.00000000000000000000001526 113.0
BYD3_k127_4293844_2 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 - - 0.000000000000000000001474 103.0
BYD3_k127_4299453_0 Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001182 368.0
BYD3_k127_4299453_1 Extradiol ring-cleavage dioxygenase class III protein subunit B K15777 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003092 263.0
BYD3_k127_4299453_2 Glutathione peroxidase K00432 - 1.11.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000005981 241.0
BYD3_k127_4299453_3 Peptidase M56, BlaR1 - - - 0.0000000000000000000000000000000000000000000000000000000000002402 234.0
BYD3_k127_4299453_4 Lytic polysaccharide mono-oxygenase, cellulose-degrading - - - 0.0000000000000000000000000000000000000000000000000004554 190.0
BYD3_k127_4299453_5 BlaR1 peptidase M56 - - - 0.000000000000000000000000000000000000000000000001359 198.0
BYD3_k127_4299453_6 Penicillinase repressor - - - 0.00000000000000000000000000000000000000000002621 164.0
BYD3_k127_4299453_7 - - - - 0.0000000000000000000000354 112.0
BYD3_k127_4299453_8 Penicillinase repressor - - - 0.000000000000000001351 96.0
BYD3_k127_4299453_9 Psort location Cytoplasmic, score 8.96 K09858 - - 0.000005323 51.0
BYD3_k127_4299953_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 1.869e-204 653.0
BYD3_k127_4299953_1 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 GO:0000166,GO:0003674,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0008144,GO:0008150,GO:0009898,GO:0009987,GO:0016020,GO:0017076,GO:0030554,GO:0032153,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0051301,GO:0071944,GO:0097159,GO:0097367,GO:0098552,GO:0098562,GO:1901265,GO:1901363 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008314 499.0
BYD3_k127_4299953_10 Reverse transcriptase-like K03469 - 3.1.26.4 0.00000000000000000000000000000002698 140.0
BYD3_k127_4299953_11 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.0000000000000000000000000543 123.0
BYD3_k127_4299953_12 Essential cell division protein K03589 - - 0.0000000000006809 79.0
BYD3_k127_4299953_2 peptidase activity K01266 - 3.4.11.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002513 502.0
BYD3_k127_4299953_3 Belongs to the MurCDEF family K01924 - 6.3.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007816 471.0
BYD3_k127_4299953_4 PFAM Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003797 428.0
BYD3_k127_4299953_5 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0032153,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0044424,GO:0044464,GO:0051301,GO:0097159,GO:0097367,GO:1901265,GO:1901363 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001922 403.0
BYD3_k127_4299953_6 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004548 356.0
BYD3_k127_4299953_7 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.000000000000000000000000000000000000000000000112 175.0
BYD3_k127_4299953_8 C4-type zinc ribbon domain K07164 - - 0.00000000000000000000000000000000204 139.0
BYD3_k127_4299953_9 Multi-copper polyphenol oxidoreductase laccase K05810 - - 0.000000000000000000000000000000003676 138.0
BYD3_k127_4335040_0 STAS domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001209 441.0
BYD3_k127_4335040_1 TLC ATP/ADP transporter K03301 - - 0.0000000000000000000000000000000000000000000000000000000000000000007376 261.0
BYD3_k127_4335040_2 phosphoprotein phosphatase activity K14680 - 6.5.1.3 0.0000000000000000000000000000000000000000000000001667 185.0
BYD3_k127_4335040_3 anti-sigma regulatory factor K04757 - 2.7.11.1 0.0000000000000000000001261 106.0
BYD3_k127_4357620_0 Proton-conducting membrane transporter K00343 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001039 397.0
BYD3_k127_4357620_1 proton-translocating NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001224 377.0
BYD3_k127_4357620_2 - - - - 0.00000000000000000000000000000000000000195 153.0
BYD3_k127_4357620_3 Acetyltransferase (GNAT) domain - - - 0.000003005 54.0
BYD3_k127_4361646_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001133 448.0
BYD3_k127_4361646_1 SpoIVB peptidase S55 K00973,K02414,K21449 - 2.7.7.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004346 327.0
BYD3_k127_4426477_0 PFAM ABC transporter related K01990 - - 0.000000000000000000000000000000000003863 143.0
BYD3_k127_4426477_1 Reductive dehalogenase subunit - - - 0.0000005212 61.0
BYD3_k127_4426477_2 - - - - 0.0000009177 61.0
BYD3_k127_4457480_0 ABC transporter K06147,K18893 - - 0.00000000000000000000000000000000000000000000000000000000000000000000007496 243.0
BYD3_k127_4457480_1 Protein of unknown function (DUF3738) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000021 247.0
BYD3_k127_4476570_0 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 - 1.9.3.1 2.495e-253 792.0
BYD3_k127_4476570_1 Polysulphide reductase, NrfD K00185 - - 3.7e-212 668.0
BYD3_k127_4476570_2 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006156 379.0
BYD3_k127_4476570_3 ABC-type Zn2 transport system, periplasmic component surface adhesin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001287 351.0
BYD3_k127_4476570_4 4Fe-4S dicluster domain K00184 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009348 328.0
BYD3_k127_4476570_5 signal sequence binding K07152 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002047 277.0
BYD3_k127_4476570_6 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000000000000000000000000000000000000000000000000000000000000000002929 241.0
BYD3_k127_4476570_7 Protein of unknown function (DUF3341) - - - 0.0000000000000000000000000000000000000000000000000000000000000001388 231.0
BYD3_k127_4476570_8 - - - - 0.000000009341 68.0
BYD3_k127_4484864_0 Asparagine synthase K01953 - 6.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006161 581.0
BYD3_k127_4484864_1 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00066 - 1.1.1.132 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000209 509.0
BYD3_k127_4490795_0 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 - 4.3.1.19 5.04e-238 746.0
BYD3_k127_4490795_1 FAD binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005576 602.0
BYD3_k127_4490795_10 DUF1626 domain containing protein - - - 0.000000000002391 71.0
BYD3_k127_4490795_11 - - - - 0.00001884 48.0
BYD3_k127_4490795_2 PQQ-like domain K05889 - 1.1.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007411 512.0
BYD3_k127_4490795_3 Putative diguanylate phosphodiesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006711 368.0
BYD3_k127_4490795_4 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003188 360.0
BYD3_k127_4490795_5 Sugar (and other) transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000003535 250.0
BYD3_k127_4490795_6 - - - - 0.00000000000000000000000000000000000006643 155.0
BYD3_k127_4490795_7 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000004526 141.0
BYD3_k127_4490795_8 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000277 132.0
BYD3_k127_4490795_9 Fumarate K01676,K01678 - 4.2.1.2 0.000000000000001454 79.0
BYD3_k127_4547841_0 ASPIC and UnbV - - - 1.332e-251 797.0
BYD3_k127_4547841_1 Aromatic-ring-opening dioxygenase LigAB, LigA subunit K04099,K04101 GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0006082,GO:0006725,GO:0008150,GO:0008152,GO:0008198,GO:0009056,GO:0009987,GO:0016054,GO:0016491,GO:0016701,GO:0016702,GO:0017144,GO:0018918,GO:0018958,GO:0019336,GO:0019396,GO:0019439,GO:0019752,GO:0032787,GO:0036238,GO:0042537,GO:0042737,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0046395,GO:0046872,GO:0046914,GO:0051213,GO:0055114,GO:0071704,GO:0072329,GO:1901360,GO:1901361,GO:1901575,GO:1901615,GO:1901616 1.13.11.57,1.13.11.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005009 571.0
BYD3_k127_4547841_10 COG0589 Universal stress protein UspA and related nucleotide-binding proteins - - - 0.00000000000000000000001817 108.0
BYD3_k127_4547841_11 Cytochrome c K00413 - - 0.000000000000001437 80.0
BYD3_k127_4547841_12 Domain of unknown function (DUF2383) - - - 0.00000000000002784 81.0
BYD3_k127_4547841_13 - - - - 0.00006085 53.0
BYD3_k127_4547841_2 Domains REC, sigma54 interaction, HTH8 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002393 476.0
BYD3_k127_4547841_3 response regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004382 475.0
BYD3_k127_4547841_4 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001842 425.0
BYD3_k127_4547841_5 Tryptophanyl-tRNA synthetase K01867 GO:0003674,GO:0003824,GO:0004812,GO:0004830,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006436,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004468 363.0
BYD3_k127_4547841_6 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003336 304.0
BYD3_k127_4547841_7 Oxidoreductase molybdopterin binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000008661 266.0
BYD3_k127_4547841_8 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000000000000000000000000000004231 250.0
BYD3_k127_4547841_9 Peptidase family M50 K06402 - - 0.00000000000000000000000000000000000000000000006028 176.0
BYD3_k127_4583847_0 Belongs to the peptidase M16 family K07263 - - 3.679e-231 747.0
BYD3_k127_4583847_1 PQQ enzyme repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000168 563.0
BYD3_k127_4583847_10 region 4 type 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000007747 238.0
BYD3_k127_4583847_11 Pfam Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000001188 216.0
BYD3_k127_4583847_12 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455 - - 0.0000000000000000000000000000000000000000000000004936 179.0
BYD3_k127_4583847_13 - - - - 0.000000000000000000000000000000000000000005356 170.0
BYD3_k127_4583847_14 Protein of unknown function (DUF3667) - - - 0.0000000000000000000000000000006287 132.0
BYD3_k127_4583847_15 - - - - 0.0000000000000000000000000008281 132.0
BYD3_k127_4583847_16 - - - - 0.000000000000002293 81.0
BYD3_k127_4583847_2 PQQ-like domain K17760 - 1.1.9.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006508 514.0
BYD3_k127_4583847_3 TIGRFAM TIGR03032 family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002223 422.0
BYD3_k127_4583847_4 Sulfotransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004414 367.0
BYD3_k127_4583847_5 Epimerase dehydratase K19180 - 1.1.1.339 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006612 362.0
BYD3_k127_4583847_6 Transketolase, pyrimidine binding domain K00615 - 2.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001705 325.0
BYD3_k127_4583847_7 Short chain dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002172 308.0
BYD3_k127_4583847_8 Transketolase, thiamine diphosphate binding domain K00615 - 2.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008205 314.0
BYD3_k127_4583847_9 Protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000008224 304.0
BYD3_k127_4584924_0 Bacterial regulatory protein, Fis family K02481 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008949 421.0
BYD3_k127_4584924_1 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005014 410.0
BYD3_k127_4584924_2 ATP hydrolysis coupled proton transport - - - 0.000000000000000000000000000000000000000000001069 178.0
BYD3_k127_4626620_0 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - - 1.744e-233 734.0
BYD3_k127_4626620_1 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 1.188e-194 637.0
BYD3_k127_4626620_2 Cobalamin-independent synthase, Catalytic domain K00549 - 2.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001551 455.0
BYD3_k127_4626620_3 - - - - 0.0000000000000000000008259 100.0
BYD3_k127_4626620_5 - - - - 0.00000000000000005929 93.0
BYD3_k127_4635576_0 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002018 630.0
BYD3_k127_4635576_1 Tannase and feruloyl esterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000161 440.0
BYD3_k127_4635576_10 - - - - 0.0000000002027 68.0
BYD3_k127_4635576_2 oxidoreductase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001325 398.0
BYD3_k127_4635576_3 electron transport chain K00347,K03614,K21163 - 1.6.5.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002165 329.0
BYD3_k127_4635576_4 - K02172 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004634 330.0
BYD3_k127_4635576_5 - K02172 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000136 320.0
BYD3_k127_4635576_6 PepSY-associated TM region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003007 290.0
BYD3_k127_4635576_7 Sigma-70 region 2 K03088 - - 0.00000000000000000000000000000000000000000000000000001235 193.0
BYD3_k127_4635576_8 23S rRNA-intervening sequence protein - - - 0.0000000000000000000000008546 109.0
BYD3_k127_4635576_9 electron transport chain K00347,K03614 - 1.6.5.8 0.0000000000000000000008502 97.0
BYD3_k127_4694864_0 PFAM 4-hydroxyphenylacetate 3-hydroxylase K00483 - 1.14.14.9 3.343e-262 816.0
BYD3_k127_4694864_1 Bacterial protein of unknown function (DUF885) - - - 2.838e-209 666.0
BYD3_k127_4694864_10 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.00000000000000000000000000000000000000000000000000000000000005042 228.0
BYD3_k127_4694864_11 Cupin domain - - - 0.0000000000000000000000000000000000000000000000000000000000003632 221.0
BYD3_k127_4694864_12 Cytochrome c oxidase subunit III K02276 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000237 205.0
BYD3_k127_4694864_13 Cytochrome c mono- and diheme variants - - - 0.0000000000000000000000000000000000000000000002555 179.0
BYD3_k127_4694864_14 - K02172 - - 0.000000000000000000000000000002992 129.0
BYD3_k127_4694864_15 Domain of unknown function (DUF4399) - - - 0.00000000000001149 80.0
BYD3_k127_4694864_16 TIGRFAM Caa(3)-type oxidase, subunit IV K02277 - 1.9.3.1 0.0000008417 56.0
BYD3_k127_4694864_17 - - - - 0.000001003 61.0
BYD3_k127_4694864_2 asparagine synthase K01953 - 6.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001641 596.0
BYD3_k127_4694864_3 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K00446 - 1.13.11.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004889 524.0
BYD3_k127_4694864_4 geranylgeranyl reductase activity K14257 - 1.14.19.49 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008291 509.0
BYD3_k127_4694864_5 Belongs to the heme-copper respiratory oxidase family K02274 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002031 490.0
BYD3_k127_4694864_6 peptidase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004044 388.0
BYD3_k127_4694864_7 Elongator protein 3, MiaB family, Radical SAM K06936 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002984 325.0
BYD3_k127_4694864_8 Cytochrome C oxidase subunit II, periplasmic domain K02275 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000007663 256.0
BYD3_k127_4694864_9 Bacterial extracellular solute-binding protein K02020 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001115 248.0
BYD3_k127_4762624_0 Belongs to the glycosyl hydrolase 13 family K01214 - 3.2.1.68 0.0 1014.0
BYD3_k127_4762624_1 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004225 364.0
BYD3_k127_4762624_10 COG4567 Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain K15012 - - 0.00000000000000004077 92.0
BYD3_k127_4762624_11 - K02172 - - 0.0000000005936 68.0
BYD3_k127_4762624_12 COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II - - - 0.000005297 53.0
BYD3_k127_4762624_13 - K18475 - - 0.00004644 56.0
BYD3_k127_4762624_2 AMP-binding enzyme C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002221 358.0
BYD3_k127_4762624_3 PFAM Sulfotransferase K01014 - 2.8.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004563 306.0
BYD3_k127_4762624_4 Major facilitator superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000111 303.0
BYD3_k127_4762624_5 Nitroreductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002648 251.0
BYD3_k127_4762624_6 Thioredoxin - - - 0.000000000000000000000000000000000005217 153.0
BYD3_k127_4762624_7 Thioredoxin - - - 0.000000000000000000000000000000000009367 145.0
BYD3_k127_4762624_8 - K02172 - - 0.00000000000000000000000000000002482 138.0
BYD3_k127_4762624_9 Pfam:HxxPF_rpt - - - 0.00000000000000000000000000002156 134.0
BYD3_k127_477115_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1092.0
BYD3_k127_477115_1 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00372 - - 0.0 1035.0
BYD3_k127_477115_10 Thymidine kinase K00857 GO:0003674,GO:0003824,GO:0004797,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006213,GO:0006259,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009120,GO:0009123,GO:0009124,GO:0009157,GO:0009162,GO:0009165,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0018130,GO:0019136,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0042802,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046104,GO:0046125,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0090304,GO:0090407,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000001438 252.0
BYD3_k127_477115_11 Cyclic nucleotide-monophosphate binding domain K21564 - - 0.000000000000000000000000000000000000000000000000000000000000002769 225.0
BYD3_k127_477115_12 oxidoreductase activity, acting on diphenols and related substances as donors - - - 0.00000000000000000000000000000000000000000000000000000000000001412 225.0
BYD3_k127_477115_13 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.00000000000000000000000000000000000000000000000000000000000001469 232.0
BYD3_k127_477115_14 PFAM MscS Mechanosensitive ion channel K22044 - - 0.0000000000000000000000000000000000000000000000000000000000005101 224.0
BYD3_k127_477115_15 CDP-alcohol phosphatidyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000003703 217.0
BYD3_k127_477115_16 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 - - 0.00000000000000000000000000000000000000000000000000000000001257 211.0
BYD3_k127_477115_17 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.00000000000000000000000000000000000000000000000000000006986 205.0
BYD3_k127_477115_18 Di-iron-containing protein involved in the repair of iron-sulfur clusters K07322 - - 0.00000000000000000000000000000000000000000000000000001168 198.0
BYD3_k127_477115_19 Belongs to the DNA glycosylase MPG family K03652 - 3.2.2.21 0.000000000000000000000000000000000000000000000000001462 192.0
BYD3_k127_477115_2 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 1.65e-211 667.0
BYD3_k127_477115_20 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995 - 2.7.8.5 0.0000000000000000000000000000000000000000000000004429 184.0
BYD3_k127_477115_21 - - - - 0.00000000000000000000000000000000000001127 157.0
BYD3_k127_477115_22 serine-type D-Ala-D-Ala carboxypeptidase activity K07259 - 3.4.16.4 0.000000000000000000000000000000001758 140.0
BYD3_k127_477115_23 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000000000000003351 118.0
BYD3_k127_477115_25 - - - - 0.0000000000000000001476 92.0
BYD3_k127_477115_26 Transposase IS200 like - - - 0.000000000000069 79.0
BYD3_k127_477115_27 - K02172 - - 0.00000001642 58.0
BYD3_k127_477115_3 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001966 495.0
BYD3_k127_477115_4 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002958 466.0
BYD3_k127_477115_5 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006305 465.0
BYD3_k127_477115_6 4 iron, 4 sulfur cluster binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002469 358.0
BYD3_k127_477115_7 Evidence 2a Function of homologous gene experimentally demonstrated in an other organism K04771 - 3.4.21.107 0.000000000000000000000000000000000000000000000000000000000000000000000000000001443 276.0
BYD3_k127_477115_8 Uracil DNA glycosylase superfamily K21929 - 3.2.2.27 0.000000000000000000000000000000000000000000000000000000000000000000000000003988 258.0
BYD3_k127_477115_9 Transcriptional regulator, LysR - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002276 261.0
BYD3_k127_4826984_0 Short chain fatty acid transporter K02106 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000211 514.0
BYD3_k127_4826984_1 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000004623 215.0
BYD3_k127_4826984_2 Alcohol dehydrogenase GroES-like domain K00121 - 1.1.1.1,1.1.1.284 0.000000000000000000000000000000000000000000000000005405 198.0
BYD3_k127_4826984_3 - K02172 - - 0.0000000000000000000000000000000000000076 168.0
BYD3_k127_4826984_4 Cobalamin-independent synthase, Catalytic domain K00549 - 2.1.1.14 0.0000000000000000000000000000000000605 137.0
BYD3_k127_4826984_5 - - - - 0.000000000000000000000002086 113.0
BYD3_k127_4826984_6 - - - - 0.0000000000003865 79.0
BYD3_k127_4887277_0 response to abiotic stimulus K03086,K06867,K06886 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006486 464.0
BYD3_k127_4887277_1 CAAX prenyl protease N-terminal, five membrane helices K06013 - 3.4.24.84 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005536 442.0
BYD3_k127_4887277_10 - - - - 0.000000000000000007257 83.0
BYD3_k127_4887277_11 FG-GAP repeat - - - 0.00000000000009652 81.0
BYD3_k127_4887277_12 Beta-lactamase - - - 0.000000000005742 75.0
BYD3_k127_4887277_13 PFAM YD repeat-containing protein - - - 0.00000322 57.0
BYD3_k127_4887277_2 translation initiation factor activity K06996 - - 0.000000000000000000000000000000000000000000000000000000000000000000002279 244.0
BYD3_k127_4887277_3 protein methyltransferase activity K02687 - - 0.00000000000000000000000000000000000000000000000000000000000000005196 232.0
BYD3_k127_4887277_4 Beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000007666 241.0
BYD3_k127_4887277_5 Las17-binding protein actin regulator - - - 0.00000000000000000000000000000000000000000000000000000000355 210.0
BYD3_k127_4887277_6 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000009679 155.0
BYD3_k127_4887277_7 ABC transporter - - - 0.00000000000000000000000000000000000003546 149.0
BYD3_k127_4887277_8 - - - - 0.0000000000000000000000000000000000016 154.0
BYD3_k127_4887277_9 - - - - 0.00000000000000000000000000004831 130.0
BYD3_k127_4911203_0 ABC transporter - - - 1.077e-257 803.0
BYD3_k127_4911203_1 ABC transporter transmembrane region K11085 - - 1.137e-251 794.0
BYD3_k127_4911203_10 ApaG domain K06195 - - 0.0000000000000000000000000000000000000000009414 164.0
BYD3_k127_4911203_11 - - - - 0.000000000000000000000000000000000000001953 167.0
BYD3_k127_4911203_12 - K02172 - - 0.00000000000000000000000000005339 128.0
BYD3_k127_4911203_13 Belongs to the anti-sigma-factor antagonist family K04749 - - 0.000000000000000000000000003996 114.0
BYD3_k127_4911203_14 PFAM Copper type II ascorbate-dependent monooxygenase, C-terminal domain - - - 0.0000000000000000000000533 113.0
BYD3_k127_4911203_15 YjbR - - - 0.000000000000000000002142 98.0
BYD3_k127_4911203_16 - - - - 0.000000000003534 78.0
BYD3_k127_4911203_17 Protein of unknown function (DUF533) - - - 0.00000000001849 72.0
BYD3_k127_4911203_18 Acetyltransferase (GNAT) family - - - 0.0000003937 60.0
BYD3_k127_4911203_2 Belongs to the UbiD family K03182,K16239 - 4.1.1.61,4.1.1.98 5.02e-224 713.0
BYD3_k127_4911203_20 SnoaL-like polyketide cyclase - - - 0.0001576 49.0
BYD3_k127_4911203_3 Polysaccharide biosynthesis protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006534 457.0
BYD3_k127_4911203_4 peptidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001009 459.0
BYD3_k127_4911203_5 Protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005188 433.0
BYD3_k127_4911203_6 Mitochondrial biogenesis AIM24 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003435 412.0
BYD3_k127_4911203_7 COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductases K00344 - 1.6.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003927 419.0
BYD3_k127_4911203_8 Inner membrane component of T3SS, cytoplasmic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000002208 263.0
BYD3_k127_4911203_9 response to copper ion K01187,K16915 - 3.2.1.20 0.0000000000000000000000000000000000000000000000005645 188.0
BYD3_k127_4954866_0 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002597 532.0
BYD3_k127_4954866_1 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.0000000000000000000000000000000000000000000000000000000000000000000000007576 254.0
BYD3_k127_4954866_2 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008150,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0033036,GO:0042886,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000001039 214.0
BYD3_k127_4954866_3 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 - - 0.0000000000000000000000000000000000000000000003734 169.0
BYD3_k127_4954866_4 Protein of unknown function (DUF502) - - - 0.0000000000000000000000000000000000001035 151.0
BYD3_k127_4990229_0 PQQ enzyme repeat K00117 - 1.1.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000024 560.0
BYD3_k127_4990229_1 OPT oligopeptide transporter protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008494 499.0
BYD3_k127_4990229_10 GDSL-like Lipase/Acylhydrolase family - - - 0.00000000000000000000000009302 114.0
BYD3_k127_4990229_12 - - - - 0.000000000000000001508 100.0
BYD3_k127_4990229_13 - - - - 0.000000000182 67.0
BYD3_k127_4990229_14 domain protein K20276 - - 0.00002765 55.0
BYD3_k127_4990229_15 - - - - 0.0001627 48.0
BYD3_k127_4990229_2 C4-dicarboxylate anaerobic carrier - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009841 484.0
BYD3_k127_4990229_3 Protein kinase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002086 394.0
BYD3_k127_4990229_4 cAMP biosynthetic process K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006592 340.0
BYD3_k127_4990229_5 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length K04760 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001036 290.0
BYD3_k127_4990229_6 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002415 254.0
BYD3_k127_4990229_7 Bacterial extracellular solute-binding protein K02020,K22003 - 5.3.3.7 0.000000000000000000000000000000000000000000000001961 184.0
BYD3_k127_4990229_8 LexA-binding, inner membrane-associated putative hydrolase K07038 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000001002 167.0
BYD3_k127_4990229_9 Conserved hypothetical protein (DUF2461) - - - 0.000000000000000000000000000000000007563 146.0
BYD3_k127_5006898_0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster - - - 4.085e-278 867.0
BYD3_k127_5006898_1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg K00174 - 1.2.7.11,1.2.7.3 2.324e-262 820.0
BYD3_k127_5006898_10 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005432 347.0
BYD3_k127_5006898_11 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003649 330.0
BYD3_k127_5006898_12 PFAM periplasmic binding protein K02016 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001757 321.0
BYD3_k127_5006898_13 methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001048 297.0
BYD3_k127_5006898_14 Diphthamide synthase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002083 263.0
BYD3_k127_5006898_15 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.00000000000000000000000000000000000000000000000000000000000000000000006822 258.0
BYD3_k127_5006898_16 A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters K04488 - - 0.000000000000000000000000000000000000000000000000000000000000000008536 226.0
BYD3_k127_5006898_17 PFAM ABC transporter K02013 - 3.6.3.34 0.000000000000000000000000000000000000000000000000000000000000009522 227.0
BYD3_k127_5006898_18 Mo-molybdopterin cofactor metabolic process K03638 - 2.7.7.75 0.0000000000000000000000000000000000000000000000000000007237 197.0
BYD3_k127_5006898_19 Phosphorylase superfamily - - - 0.0000000000000000000000000000000000000000000000001733 188.0
BYD3_k127_5006898_2 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006774 627.0
BYD3_k127_5006898_20 Isoprenylcysteine carboxyl methyltransferase (ICMT) family - - - 0.000000000000000000000000000000000000000000000769 172.0
BYD3_k127_5006898_21 2Fe-2S iron-sulfur cluster binding domain K04755 - - 0.0000000000000000000000000000000000000000002967 167.0
BYD3_k127_5006898_22 PFAM periplasmic binding protein K02016 - - 0.000000000000000000000000000000000000000005406 175.0
BYD3_k127_5006898_23 Belongs to the HesB IscA family K13628 - - 0.00000000000000000000000000000001247 129.0
BYD3_k127_5006898_24 PFAM heat shock protein DnaJ K04082 - - 0.0000000000000000000000000000002016 133.0
BYD3_k127_5006898_25 Ion channel - - - 0.0000000000000000000000000002461 117.0
BYD3_k127_5006898_26 Peptidase M56, BlaR1 - - - 0.0000000000000000000000000492 118.0
BYD3_k127_5006898_27 Belongs to the phosphoglycerate mutase family K02226,K22305 - 3.1.3.3,3.1.3.73 0.0000000000000000000003944 112.0
BYD3_k127_5006898_28 FeS assembly protein IscX - - - 0.000000000000000000001007 95.0
BYD3_k127_5006898_29 - - - - 0.0000000000000006767 90.0
BYD3_k127_5006898_3 Heat shock 70 kDa protein K04043 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007696 562.0
BYD3_k127_5006898_30 - - - - 0.00009894 49.0
BYD3_k127_5006898_31 Lipoprotein - - - 0.0002483 50.0
BYD3_k127_5006898_4 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K00175 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002202 496.0
BYD3_k127_5006898_5 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001416 482.0
BYD3_k127_5006898_6 Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate K11779,K11784,K18285 - 1.21.98.1,2.5.1.120,2.5.1.77 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004967 477.0
BYD3_k127_5006898_7 MoeA N-terminal region (domain I and II) K03750,K07219 - 2.10.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001008 386.0
BYD3_k127_5006898_8 Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11785 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009644 374.0
BYD3_k127_5006898_9 Protein of unknown function (DUF1326) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004669 361.0
BYD3_k127_5014355_0 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007788 431.0
BYD3_k127_5014355_1 Radical SAM superfamily K04069 - 1.97.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008143 433.0
BYD3_k127_5014355_10 Fumarylacetoacetate (FAA) hydrolase family - - - 0.000000000000000000000000000000000000000000000935 180.0
BYD3_k127_5014355_11 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.000000000000000000000000000000000002751 147.0
BYD3_k127_5014355_12 Protein of unknown function (DUF3810) - - - 0.0000000000000000000000008841 117.0
BYD3_k127_5014355_13 23S rRNA-intervening sequence protein - - - 0.000000000000000000000003352 106.0
BYD3_k127_5014355_14 - - - - 0.00000000000000000000002361 112.0
BYD3_k127_5014355_16 PFAM Beta-lactamase - - - 0.0000000143 66.0
BYD3_k127_5014355_2 Protein involved in outer membrane biogenesis - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009905 352.0
BYD3_k127_5014355_3 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine K07566 - 2.7.7.87 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006442 342.0
BYD3_k127_5014355_4 Serine threonine protein kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002018 334.0
BYD3_k127_5014355_5 PFAM HD domain K07814 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006811 321.0
BYD3_k127_5014355_6 eRF1 domain 3 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006017 304.0
BYD3_k127_5014355_7 GDSL-like Lipase/Acylhydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000198 215.0
BYD3_k127_5014355_8 FAD dependent oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000844 204.0
BYD3_k127_5014355_9 Disulphide isomerase - - - 0.00000000000000000000000000000000000000000000009239 175.0
BYD3_k127_5025497_0 non-ribosomal peptide synthetase - - - 0.0 1214.0
BYD3_k127_5025497_1 Non-ribosomal peptide synthetase modules and related - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006884 283.0
BYD3_k127_504440_0 Acetyl-coenzyme A synthetase N-terminus K01895 - 6.2.1.1 9.07e-286 889.0
BYD3_k127_504440_1 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K14393 - - 4.426e-231 724.0
BYD3_k127_504440_10 Protein conserved in bacteria - - - 0.000000000000000000001341 97.0
BYD3_k127_504440_12 - - - - 0.00001506 49.0
BYD3_k127_504440_2 alcohol dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003287 376.0
BYD3_k127_504440_3 Methionine synthase II (cobalamin-independent) K00549 - 2.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007529 279.0
BYD3_k127_504440_4 Predicted membrane protein (DUF2157) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000005004 252.0
BYD3_k127_504440_5 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001529 249.0
BYD3_k127_504440_6 - - - - 0.0000000000000000000000000000000000000000002051 163.0
BYD3_k127_504440_7 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella - - - 0.00000000000000000000000000000001526 138.0
BYD3_k127_504440_8 Protein of unknown function (DUF3738) - - - 0.000000000000000000000000001312 122.0
BYD3_k127_504440_9 Protein of unknown function, DUF485 - - - 0.00000000000000000000000006134 110.0
BYD3_k127_5048438_0 oligopeptide transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002093 486.0
BYD3_k127_5048438_1 Cytochrome P460 - - - 0.0000000000000000000000000000000000000003846 165.0
BYD3_k127_5048438_2 - - - - 0.0000000000001176 78.0
BYD3_k127_5079347_0 DNA topological change K03168 - 5.99.1.2 3.813e-210 681.0
BYD3_k127_5079347_1 Protein of unknown function (DUF1552) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000487 341.0
BYD3_k127_5079347_2 ankyrin repeat K15503 - - 0.00000000000000000000000000000000001738 154.0
BYD3_k127_5079347_3 Tetratricopeptide repeat - - - 0.00000000000000000000009631 104.0
BYD3_k127_5137082_0 Carboxypeptidase regulatory-like domain - - - 2.837e-287 915.0
BYD3_k127_5137082_1 oxidoreductase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007174 404.0
BYD3_k127_5137082_2 Peptidase M56, BlaR1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007705 276.0
BYD3_k127_5137082_3 Peptidase M56, BlaR1 - - - 0.000000000000000000000000000000000000000000000000000000005309 226.0
BYD3_k127_5137082_4 - K02172 - - 0.0000000000000000000000000000000000000002966 161.0
BYD3_k127_5137082_5 Peptidase M56, BlaR1 - - - 0.000000000000000000000000000000000000002742 158.0
BYD3_k127_5137082_6 - K02172 - - 0.0000000000000000000000000000000000000175 166.0
BYD3_k127_5137082_7 Peptidase M56, BlaR1 - - - 0.00000000000000000000000000000000007058 147.0
BYD3_k127_5137082_8 Penicillinase repressor - - - 0.000000000000000000001626 99.0
BYD3_k127_5137082_9 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000006217 85.0
BYD3_k127_5143628_0 Insulinase (Peptidase family M16) K07263 - - 3.621e-317 1003.0
BYD3_k127_5143628_1 MacB-like periplasmic core domain - - - 1.772e-218 708.0
BYD3_k127_5143628_10 PFAM Amidohydrolase family K01443 - 3.5.1.25 0.0000000000000000000000000000000000000000000000000000000000000000001583 245.0
BYD3_k127_5143628_11 PFAM peptidase S8 and S53, subtilisin, kexin, sedolisin - - - 0.0000000000000000000000000000000000000000000000000000000000002046 238.0
BYD3_k127_5143628_12 endonuclease III K01247 - 3.2.2.21 0.00000000000000000000000000000000000000000000000000000000001825 212.0
BYD3_k127_5143628_13 iron dependent repressor K03709 - - 0.000000000000000000000000000000000000000000000000000002487 209.0
BYD3_k127_5143628_14 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) K06920 - 6.3.4.20 0.0000000000000000000000000000000000000000000000003848 183.0
BYD3_k127_5143628_15 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) K03183 - 2.1.1.163,2.1.1.201 0.00000000000000000000000000000000000000000001325 171.0
BYD3_k127_5143628_16 COG0720 6-pyruvoyl-tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.0000000000000000000000000000000000000000004918 160.0
BYD3_k127_5143628_17 Transcriptional regulator PadR-like family - - - 0.000000000000000000000000000000000002957 140.0
BYD3_k127_5143628_18 Transcriptional regulator - - - 0.00000000000000000000000000000000000409 142.0
BYD3_k127_5143628_19 HAD-hyrolase-like K01091 - 3.1.3.18 0.0000000000000000000000000000000001017 144.0
BYD3_k127_5143628_2 Mo-molybdopterin cofactor metabolic process K03148,K03636,K21029,K21147 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006534,GO:0006535,GO:0006563,GO:0006732,GO:0006777,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008146,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009108,GO:0009605,GO:0009607,GO:0009987,GO:0016053,GO:0016740,GO:0016772,GO:0016779,GO:0016782,GO:0018130,GO:0019344,GO:0019538,GO:0019637,GO:0019720,GO:0019752,GO:0020012,GO:0030312,GO:0030682,GO:0042783,GO:0043170,GO:0043207,GO:0043436,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0044403,GO:0044413,GO:0044415,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0050896,GO:0051186,GO:0051188,GO:0051189,GO:0051701,GO:0051704,GO:0051707,GO:0051805,GO:0051807,GO:0051810,GO:0051832,GO:0051834,GO:0052173,GO:0052200,GO:0052564,GO:0052572,GO:0061605,GO:0070566,GO:0071704,GO:0071944,GO:0075136,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.7.73,2.7.7.80,2.8.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001125 591.0
BYD3_k127_5143628_20 proteolysis - - - 0.0000000000000000000000000000000005344 136.0
BYD3_k127_5143628_21 - - - - 0.000000000000000001436 96.0
BYD3_k127_5143628_22 Protein of unknown function (DUF541) K09807 - - 0.000000000000001002 90.0
BYD3_k127_5143628_23 HD domain - - - 0.00000000003845 66.0
BYD3_k127_5143628_24 - - - - 0.0003206 49.0
BYD3_k127_5143628_25 Multicopper oxidase - - - 0.0004973 50.0
BYD3_k127_5143628_3 CoA-transferase family III K07749 - 2.8.3.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002136 433.0
BYD3_k127_5143628_4 Belongs to the cysteine synthase cystathionine beta- synthase family K12339,K21148 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004124,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006534,GO:0006535,GO:0006563,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0016829,GO:0016846,GO:0019344,GO:0019752,GO:0019842,GO:0030170,GO:0032991,GO:0033847,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0048037,GO:0050662,GO:0070279,GO:0071704,GO:0080146,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.5.1.113,2.5.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000643 403.0
BYD3_k127_5143628_5 PFAM multicopper oxidase type - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000108 390.0
BYD3_k127_5143628_6 Deoxyhypusine synthase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002993 383.0
BYD3_k127_5143628_7 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008954 364.0
BYD3_k127_5143628_8 transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003401 345.0
BYD3_k127_5143628_9 Bacterial regulatory protein, Fis family K07713 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004828 280.0
BYD3_k127_5204503_0 Heparinase II/III N-terminus - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003324 301.0
BYD3_k127_5204503_1 COG0223 Methionyl-tRNA formyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007199 277.0
BYD3_k127_5204503_2 glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000008997 276.0
BYD3_k127_5204503_3 transferase activity, transferring glycosyl groups K01912 - 6.2.1.30 0.0000000000000000000000000000000000000000000000000000000000000000000001297 254.0
BYD3_k127_5204503_4 polysaccharide deacetylase - - - 0.0000000000000000000000000000000000000000000000000001113 196.0
BYD3_k127_5204503_6 GDSL-like Lipase/Acylhydrolase family - - - 0.00001091 59.0
BYD3_k127_5213168_0 Acetyl-coenzyme A synthetase N-terminus K01907 - 6.2.1.16 3.98e-297 932.0
BYD3_k127_5213168_1 Protein kinase domain K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001147 376.0
BYD3_k127_5213168_2 - K02172 - - 0.0000000000000000000000000000000000000006356 165.0
BYD3_k127_5213168_3 - K02172 - - 0.0000000000000000000000000000000000001097 153.0
BYD3_k127_5213168_6 Carboxypeptidase regulatory-like domain - - - 0.0001261 51.0
BYD3_k127_5215411_0 Belongs to the UDP-glucose GDP-mannose dehydrogenase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004689 486.0
BYD3_k127_5215411_1 3-demethylubiquinone-9 3-O-methyltransferase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001048 367.0
BYD3_k127_5215411_2 NUDIX domain - - - 0.000000000000000000000000000000000001165 146.0
BYD3_k127_5215411_3 radical SAM domain protein - - - 0.0000000000000006036 93.0
BYD3_k127_5222306_0 peptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003782 589.0
BYD3_k127_5229887_0 - - - - 0.00000000000000000000000000000000000000000000000000000000002069 216.0
BYD3_k127_5229887_1 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000005698 191.0
BYD3_k127_5229887_3 - - - - 0.0000006168 54.0
BYD3_k127_5229887_4 Cupin 2, conserved barrel domain protein - - - 0.00001389 54.0
BYD3_k127_5255505_0 Flavin containing amine oxidoreductase - - - 3.89e-281 870.0
BYD3_k127_5255505_1 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 GO:0003674,GO:0003824,GO:0004478,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016740,GO:0016765,GO:0044424,GO:0044444,GO:0044464 2.5.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003153 481.0
BYD3_k127_5255505_10 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000001737 276.0
BYD3_k127_5255505_11 TIGRFAM 40-residue YVTN family beta-propeller repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000006255 265.0
BYD3_k127_5255505_12 Belongs to the HisA HisF family K01814 - 5.3.1.16 0.0000000000000000000000000000000000000000000000000000000000000000001262 236.0
BYD3_k127_5255505_13 Molybdate ABC transporter K02018 - - 0.000000000000000000000000000000000000000000000000000000000000000006265 235.0
BYD3_k127_5255505_14 - K06921 - - 0.00000000000000000000000000000000000000000000000000000000000000001135 238.0
BYD3_k127_5255505_15 Carboxypeptidase regulatory-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000006083 250.0
BYD3_k127_5255505_16 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.0000000000000000000000000000000000000000000000000000000001556 213.0
BYD3_k127_5255505_17 Mycothiol maleylpyruvate isomerase N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000001301 202.0
BYD3_k127_5255505_18 FAD dependent oxidoreductase K03153 - 1.4.3.19 0.00000000000000000000000000000000000000000000000000002988 201.0
BYD3_k127_5255505_19 Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system K02017 - 3.6.3.29 0.00000000000000000000000000000000000000000000000001414 192.0
BYD3_k127_5255505_2 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001819 477.0
BYD3_k127_5255505_20 Bacterial extracellular solute-binding protein K02020 - - 0.0000000000000000000000000000000000000000000000005013 184.0
BYD3_k127_5255505_21 methylamine metabolic process K03885,K15977 - 1.6.99.3 0.000000000000000000000000000000000000438 144.0
BYD3_k127_5255505_22 Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP K11755 - 3.5.4.19,3.6.1.31 0.000000000000000000000000000000000000721 141.0
BYD3_k127_5255505_23 TOBE domain - - - 0.000000000000000000000000000000000009286 140.0
BYD3_k127_5255505_24 domain protein K14194 - - 0.0000000000000000000000000000006066 140.0
BYD3_k127_5255505_25 BMC - - - 0.0000000000000000000000000000007552 126.0
BYD3_k127_5255505_26 DoxX - - - 0.0000000000000000000000000006811 119.0
BYD3_k127_5255505_27 Periplasmic or secreted lipoprotein - - - 0.00000000000000000006747 101.0
BYD3_k127_5255505_28 domain protein - - - 0.000000000000000006932 98.0
BYD3_k127_5255505_29 Carboxypeptidase regulatory-like domain - - - 0.0000000000001027 85.0
BYD3_k127_5255505_3 TIGRFAM phytoene desaturase K10027 - 1.3.99.26,1.3.99.28,1.3.99.29,1.3.99.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001017 449.0
BYD3_k127_5255505_30 helix_turn_helix, mercury resistance - - - 0.0000000000008981 78.0
BYD3_k127_5255505_32 oxidoreductase activity - - - 0.00000006549 66.0
BYD3_k127_5255505_33 Cytochrome c - - - 0.000000859 55.0
BYD3_k127_5255505_34 Major facilitator K06902 - - 0.00008235 46.0
BYD3_k127_5255505_4 ATP phosphoribosyltransferase K00765 - 2.4.2.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001027 404.0
BYD3_k127_5255505_5 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 - 1.1.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002268 365.0
BYD3_k127_5255505_6 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001333 311.0
BYD3_k127_5255505_7 Imidazoleglycerol-phosphate dehydratase K01693 - 4.2.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006657 296.0
BYD3_k127_5255505_8 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000867 297.0
BYD3_k127_5255505_9 phosphorelay signal transduction system - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001574 274.0
BYD3_k127_5263665_0 Cobalamin-independent synthase, Catalytic domain K00549 - 2.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000006824 265.0
BYD3_k127_5263665_1 binds to the 23S rRNA K02939 - - 0.0000000000000000000000000000000000000001089 154.0
BYD3_k127_5263665_2 PFAM SMP-30 Gluconolaconase - - - 0.0000000000000000000000000000000003295 143.0
BYD3_k127_5263665_3 pilus organization - - - 0.0000000000000000000000000006711 126.0
BYD3_k127_5263665_4 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 - - 0.000000000000000000000003333 103.0
BYD3_k127_5269323_0 glucose sorbosone - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001013 322.0
BYD3_k127_5269323_1 peptidyl-prolyl cis-trans isomerase K03772 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000008042 185.0
BYD3_k127_5269323_2 DNA polymerase X family K02347 - - 0.000000000000000000000000000000000002799 145.0
BYD3_k127_5269323_3 - - - - 0.00000000000000000000001913 111.0
BYD3_k127_5269323_4 Involved in the tonB-independent uptake of proteins K12132 - 2.7.11.1 0.000000000000000000007812 94.0
BYD3_k127_5269323_5 Belongs to the universal stress protein A family - - - 0.0000007664 57.0
BYD3_k127_5269323_6 Domain of unknown function DUF21 K03699 - - 0.000003212 54.0
BYD3_k127_5274417_0 Protein of unknown function (DUF1587) - - - 3.041e-302 975.0
BYD3_k127_5274417_1 Glycosyl hydrolase family 65, N-terminal domain K15923 - 3.2.1.51 8.79e-291 913.0
BYD3_k127_5274417_10 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002687 503.0
BYD3_k127_5274417_11 Protein of unknown function (DUF1552) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000203 452.0
BYD3_k127_5274417_12 ankyrin repeat K15503 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004132 449.0
BYD3_k127_5274417_13 ribonuclease inhibitor activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007727 449.0
BYD3_k127_5274417_14 Arylsulfotransferase (ASST) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001404 437.0
BYD3_k127_5274417_15 Putative esterase K07214 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002871 424.0
BYD3_k127_5274417_16 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001894 394.0
BYD3_k127_5274417_17 alginic acid biosynthetic process K01729 - 4.2.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001679 382.0
BYD3_k127_5274417_18 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001663 329.0
BYD3_k127_5274417_19 Putative esterase K07214 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005651 322.0
BYD3_k127_5274417_2 Serine hydrolase involved in the detoxification of formaldehyde - - - 2.222e-244 767.0
BYD3_k127_5274417_20 Putative esterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002561 318.0
BYD3_k127_5274417_21 Protein of unknown function (DUF1552) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006494 308.0
BYD3_k127_5274417_22 PFAM Response regulator receiver domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001431 248.0
BYD3_k127_5274417_23 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000009871 214.0
BYD3_k127_5274417_24 PFAM ATP-binding region, ATPase domain protein domain protein K07683 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000002894 221.0
BYD3_k127_5274417_25 Domain of Unknown Function (DUF1080) - - - 0.000000000000000000000000000000000000000000000000000000004947 205.0
BYD3_k127_5274417_26 - - - - 0.000000000000000000000000000000000000000002444 168.0
BYD3_k127_5274417_27 - - - - 0.000000000000000000000000000000000001552 151.0
BYD3_k127_5274417_28 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000002517 130.0
BYD3_k127_5274417_29 Stress responsive A/B Barrel Domain - - - 0.0000000000000000000000000005107 116.0
BYD3_k127_5274417_3 glycosyl transferase family K00697,K16055 - 2.4.1.15,2.4.1.347,3.1.3.12 4.335e-234 746.0
BYD3_k127_5274417_31 - - - - 0.0000000000000000000000006466 119.0
BYD3_k127_5274417_32 Ankyrin repeat - - - 0.0000000000000000000001074 113.0
BYD3_k127_5274417_33 - - - - 0.000000000000000000005201 95.0
BYD3_k127_5274417_34 - - - - 0.000000000000000001439 98.0
BYD3_k127_5274417_35 - - - - 0.0000000000002827 76.0
BYD3_k127_5274417_36 - - - - 0.000000000002254 78.0
BYD3_k127_5274417_37 - - - - 0.0000000001879 67.0
BYD3_k127_5274417_38 Transcriptional regulator - - - 0.000000002931 63.0
BYD3_k127_5274417_4 PFAM monooxygenase FAD-binding K20940 - 1.14.13.218 1.4e-216 678.0
BYD3_k127_5274417_5 DNA topological change K03168 - 5.99.1.2 2.313e-206 668.0
BYD3_k127_5274417_6 Alpha amylase, catalytic domain K00690,K05343 - 2.4.1.7,3.2.1.1,5.4.99.16 1.293e-198 630.0
BYD3_k127_5274417_7 Neutral/alkaline non-lysosomal ceramidase, N-terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006392 604.0
BYD3_k127_5274417_8 Protein of unknown function (DUF1552) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003204 589.0
BYD3_k127_5274417_9 DNA topological change - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004687 546.0
BYD3_k127_5301776_0 Carbamoyl-phosphate synthetase large chain domain protein K01955 - 6.3.5.5 0.0 1379.0
BYD3_k127_5301776_1 - - - - 2.614e-299 934.0
BYD3_k127_5301776_10 of the beta-lactamase superfamily I K06167 - 3.1.4.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000014 267.0
BYD3_k127_5301776_11 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.000000000000000000000000000000000000000000000000000000000000000000000000002172 263.0
BYD3_k127_5301776_12 TIGRFAM MazG family protein K02428,K02499,K04765 - 3.6.1.66,3.6.1.9 0.000000000000000000000000000000000000000000000000000000000000000000002018 248.0
BYD3_k127_5301776_13 Metallo-beta-lactamase superfamily K02238 - - 0.0000000000000000000000000000000000000000000000000000000000000000004316 257.0
BYD3_k127_5301776_14 ECF sigma factor - - - 0.00000000000000000000000000000000000000000000000000002746 194.0
BYD3_k127_5301776_15 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000004482 209.0
BYD3_k127_5301776_16 Protein of unknown function (DUF3738) K02172 - - 0.00000000000000000000000000000000000000003452 162.0
BYD3_k127_5301776_17 haloacid dehalogenase-like hydrolase - - - 0.0000000000000000000000000000000000222 144.0
BYD3_k127_5301776_18 cell redox homeostasis - - - 0.0000000000000000000000000000002115 143.0
BYD3_k127_5301776_19 PD-(D/E)XK nuclease superfamily - - - 0.00000000000000000000000000003636 122.0
BYD3_k127_5301776_2 ASPIC and UnbV - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006938 562.0
BYD3_k127_5301776_20 COGs COG1629 Outer membrane receptor protein mostly Fe transport K02014 - - 0.0000000000000000000000000001311 135.0
BYD3_k127_5301776_21 Belongs to the UPF0102 family K07460 - - 0.0000000000000000000000000007448 117.0
BYD3_k127_5301776_22 Domain of unknown function (DUF1844) - - - 0.0000000000000000001533 91.0
BYD3_k127_5301776_23 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.000000000000000003913 95.0
BYD3_k127_5301776_24 Cytochrome c - - - 0.0000000000000005939 92.0
BYD3_k127_5301776_25 Cytochrome c - - - 0.00000000000001198 85.0
BYD3_k127_5301776_26 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.000000000001068 74.0
BYD3_k127_5301776_27 S-layer homology domain - - - 0.000000000009049 75.0
BYD3_k127_5301776_28 PFAM PEGA domain - - - 0.000000003531 67.0
BYD3_k127_5301776_29 cheY-homologous receiver domain - - - 0.0000001776 59.0
BYD3_k127_5301776_3 Aminotransferase class-III K00823 - 2.6.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001559 548.0
BYD3_k127_5301776_30 domain protein - - - 0.0003777 51.0
BYD3_k127_5301776_4 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814,K05365 - 2.4.1.129,3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008498 472.0
BYD3_k127_5301776_5 Galactose-1-phosphate uridyl transferase, N-terminal domain K00965 - 2.7.7.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002633 444.0
BYD3_k127_5301776_6 TIGRFAM Carbamoyl-phosphate synthase, small subunit K01956 - 6.3.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000675 434.0
BYD3_k127_5301776_7 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 - 6.1.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001794 438.0
BYD3_k127_5301776_8 Protein tyrosine kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008962 382.0
BYD3_k127_5301776_9 Bacillithiol biosynthesis BshC K22136 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007737 305.0
BYD3_k127_531368_0 Belongs to the iron ascorbate-dependent oxidoreductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001127 481.0
BYD3_k127_531368_1 Spore coat protein CotH - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001224 335.0
BYD3_k127_531368_2 shikimate kinase activity K00891,K13829 - 2.7.1.71,4.2.3.4 0.000000000000000000000000000000000000000000000000000000000003063 215.0
BYD3_k127_531368_3 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000005669 128.0
BYD3_k127_531368_4 - - - - 0.0000000000000000000001252 109.0
BYD3_k127_531368_5 - - - - 0.0000000000000000000005209 107.0
BYD3_k127_531368_6 - - - - 0.000000000000004485 86.0
BYD3_k127_531368_7 - - - - 0.00000000008905 68.0
BYD3_k127_5368989_0 DNA topological change K03168 - 5.99.1.2 2.141e-227 732.0
BYD3_k127_5368989_1 long-chain fatty acid transporting porin activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006362 441.0
BYD3_k127_5368989_2 Ankyrin repeat - - - 0.000000000000000000000000000000000000000000000000000000001448 221.0
BYD3_k127_5368989_3 Domain of Unknown Function (DUF1080) - - - 0.00000000000000000000000000000000000000000000000000624 188.0
BYD3_k127_5368989_4 COG1512 Beta-propeller domains of methanol dehydrogenase type K06872 - - 0.000000000000000000000000000000000000000000000000006771 194.0
BYD3_k127_5368989_5 - - - - 0.000000000000000000000000000000000000000000006425 179.0
BYD3_k127_5368989_6 Peptidase M56, BlaR1 - - - 0.0000000000000000000000000000000000001128 153.0
BYD3_k127_5368989_7 Protein of unknown function (DUF3738) - - - 0.000000000000000000000000000003202 131.0
BYD3_k127_5383515_1 Cupin 2, conserved barrel domain protein - - - 0.000000000000000000000000000000000000000000000000000004161 192.0
BYD3_k127_5383515_2 Las17-binding protein actin regulator - - - 0.00000000000000000000000000000000000000000000000000006624 194.0
BYD3_k127_5383515_3 - - - - 0.0000000000000000000000000000000006155 143.0
BYD3_k127_5383515_4 - - - - 0.000164 49.0
BYD3_k127_5386565_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1240.0
BYD3_k127_5386565_1 Biotin-lipoyl like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003086 368.0
BYD3_k127_5386565_10 Plays a role in the regulation of phosphate uptake K02039 - - 0.000000000005376 66.0
BYD3_k127_5386565_11 Protein of unknown function (DUF3738) - - - 0.000000001302 63.0
BYD3_k127_5386565_2 Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006969 358.0
BYD3_k127_5386565_3 Phosphate-selective porin O and P K07221 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001259 286.0
BYD3_k127_5386565_4 VWA-like domain (DUF2201) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001695 260.0
BYD3_k127_5386565_5 Uncharacterized protein conserved in bacteria (DUF2236) - - - 0.000000000000000000000000000000000000000000000000000000001045 210.0
BYD3_k127_5386565_6 PFAM ATPase family associated with various cellular activities (AAA) - - - 0.000000000000000000000000000000000000000000000000000000002885 214.0
BYD3_k127_5386565_7 PFAM SMP-30 Gluconolaconase - - - 0.0000000000000000000000000000000000000000000000000000008652 205.0
BYD3_k127_5386565_8 Peptidase family M28 K19702 - 3.4.11.24 0.000000000000000000000000002241 124.0
BYD3_k127_5386565_9 PFAM transcriptional regulator PadR family protein - - - 0.00000000000000000000000001189 113.0
BYD3_k127_5390026_0 Sigma-54 interaction domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003731 421.0
BYD3_k127_5390026_1 cytochrome c peroxidase K00428 - 1.11.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001017 397.0
BYD3_k127_5390026_10 - - - - 0.00000000000009882 83.0
BYD3_k127_5390026_11 ExbD TolR family transport energizing protein K03559,K03560 - - 0.000001929 56.0
BYD3_k127_5390026_2 Tetratricopeptide repeats K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002513 304.0
BYD3_k127_5390026_3 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000004012 165.0
BYD3_k127_5390026_4 - - - - 0.00000000000000000000000000000000000001006 164.0
BYD3_k127_5390026_5 hydrolase activity, acting on ester bonds - - - 0.00000000000000000000000000001549 136.0
BYD3_k127_5390026_6 cheY-homologous receiver domain - - - 0.00000000000000000000000005325 111.0
BYD3_k127_5390026_7 Esterase - - - 0.000000000000000000000000074 117.0
BYD3_k127_5390026_8 thiolester hydrolase activity - - - 0.000000000000000000000001036 115.0
BYD3_k127_5390026_9 Periplasmic or secreted lipoprotein - - - 0.0000000000000009311 87.0
BYD3_k127_5412592_0 Protein of unknown function, DUF255 K06888 - - 1.294e-225 720.0
BYD3_k127_5412592_1 Protein of unknown function (DUF819) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001302 468.0
BYD3_k127_5412592_2 PAP2 superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008819 365.0
BYD3_k127_5412592_3 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001374 317.0
BYD3_k127_5412592_5 Peptidase family M48 - - - 0.000000000000000000000000000000000000000003413 165.0
BYD3_k127_5412592_6 Peptidase M56, BlaR1 - - - 0.00000000000000000000000000000001014 139.0
BYD3_k127_5412592_7 Protein of unknown function (DUF2911) - - - 0.00000000000000002521 89.0
BYD3_k127_5412592_8 - - - - 0.00007403 48.0
BYD3_k127_5412592_9 Tetratricopeptide repeat protein - - - 0.0006953 53.0
BYD3_k127_5421805_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 2.046e-304 947.0
BYD3_k127_5421805_1 FAD linked oxidases, C-terminal domain K00102,K00104 GO:0003674,GO:0003824,GO:0006066,GO:0006082,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009441,GO:0009987,GO:0016054,GO:0016491,GO:0016614,GO:0017144,GO:0019154,GO:0019752,GO:0032787,GO:0033554,GO:0034308,GO:0034310,GO:0042737,GO:0043436,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0046164,GO:0046296,GO:0046395,GO:0050896,GO:0051716,GO:0055114,GO:0071704,GO:0072329,GO:1901575,GO:1901615,GO:1901616 1.1.2.4,1.1.3.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001237 616.0
BYD3_k127_5421805_10 Amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008798 396.0
BYD3_k127_5421805_11 Cytochrome b(C-terminal)/b6/petD K00412 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007699 381.0
BYD3_k127_5421805_12 TIGRFAM PQQ-dependent dehydrogenase, methanol ethanol family K00114 - 1.1.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005072 330.0
BYD3_k127_5421805_13 Aldolase/RraA - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004156 307.0
BYD3_k127_5421805_14 COG1116 ABC-type nitrate sulfonate bicarbonate transport system, ATPase component K02049 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004068 281.0
BYD3_k127_5421805_15 Catalytic LigB subunit of aromatic ring-opening dioxygenase K15061 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007229 280.0
BYD3_k127_5421805_16 Protein of unknown function (DUF3500) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004362 273.0
BYD3_k127_5421805_17 Aldolase/RraA - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003608 249.0
BYD3_k127_5421805_18 FAD linked oxidases, C-terminal domain K11472 - - 0.000000000000000000000000000000000000000000000000000000000000001123 233.0
BYD3_k127_5421805_19 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000001306 222.0
BYD3_k127_5421805_2 L-lactate permease K03303 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004351 569.0
BYD3_k127_5421805_20 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 - - 0.000000000000000000000000000000000000000000000000000000000000002016 218.0
BYD3_k127_5421805_21 Binding-protein-dependent transport system inner membrane component - - - 0.000000000000000000000000000000000000000000000000000000000000002655 229.0
BYD3_k127_5421805_22 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000209 218.0
BYD3_k127_5421805_23 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.00000000000000000000000000000000000000000000000000000005858 201.0
BYD3_k127_5421805_24 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03564 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000003709 197.0
BYD3_k127_5421805_25 Domain of unknown function (DUF4159) - - - 0.00000000000000000000000000000000000000000000000004231 188.0
BYD3_k127_5421805_26 Domain of unknown function (DUF4159) - - - 0.0000000000000000000000000000000000000000000000263 181.0
BYD3_k127_5421805_27 Acetyltransferase (GNAT) family - - - 0.0000000000000000000000000000000000000000000006136 179.0
BYD3_k127_5421805_28 Phytanoyl-CoA dioxygenase (PhyH) - - - 0.00000000000000000000000000000000000000000002077 169.0
BYD3_k127_5421805_29 Cell division protein - - - 0.0000000000000000000000000000000000000005166 154.0
BYD3_k127_5421805_3 Acyl-CoA synthetase (AMP-forming) AMP-acid ligase II K00666,K18660 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003406 561.0
BYD3_k127_5421805_30 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000000000000000000219 138.0
BYD3_k127_5421805_31 Dodecin K09165 - - 0.0000000000000000000000000005233 115.0
BYD3_k127_5421805_32 - - - - 0.000000000000000000000000003952 122.0
BYD3_k127_5421805_33 - - - - 0.00000000000000000000000002291 120.0
BYD3_k127_5421805_34 - - - - 0.000000000000000000000000576 109.0
BYD3_k127_5421805_35 - - - - 0.0000000000000000000000006249 118.0
BYD3_k127_5421805_36 PFAM Rieske 2Fe-2S domain K03886 - - 0.000000000000000000000002317 110.0
BYD3_k127_5421805_37 SMART helix-turn-helix domain protein - - - 0.00000000000000000001448 101.0
BYD3_k127_5421805_38 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.0000000000000000005146 86.0
BYD3_k127_5421805_39 - - - - 0.000000000000000002231 97.0
BYD3_k127_5421805_4 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009711 509.0
BYD3_k127_5421805_40 - - - - 0.00000000000004452 84.0
BYD3_k127_5421805_41 - - - - 0.00000000005044 64.0
BYD3_k127_5421805_42 NMT1-like family K02051,K15551 - - 0.000001387 60.0
BYD3_k127_5421805_43 Cupredoxin-like domain - - - 0.00001119 52.0
BYD3_k127_5421805_44 PFAM Endonuclease Exonuclease phosphatase - - - 0.0004131 51.0
BYD3_k127_5421805_5 Domain of unknown function (DUF2088) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001589 503.0
BYD3_k127_5421805_6 Fe-S oxidoreductase K11473 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001204 472.0
BYD3_k127_5421805_7 carboxylic ester hydrolase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009595 442.0
BYD3_k127_5421805_8 amidohydrolase K03392,K07045 - 4.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007684 428.0
BYD3_k127_5421805_9 peptidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003872 398.0
BYD3_k127_5438593_0 Transporter - - - 8.152e-284 889.0
BYD3_k127_5438593_1 COGs COG5001 signal transduction protein containing a membrane domain an EAL and a GGDEF domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000085 455.0
BYD3_k127_5438593_2 - - - - 0.0000000000000000000000000000000000000000000000000000001434 201.0
BYD3_k127_5438593_3 - K02172 - - 0.0000000003389 69.0
BYD3_k127_5438593_4 - - - - 0.000000009807 65.0
BYD3_k127_5527794_0 Sulfite reductase K00366,K00381,K00392 - 1.7.7.1,1.8.1.2,1.8.7.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003805 621.0
BYD3_k127_5527794_1 Porphyromonas-type peptidyl-arginine deiminase K10536 - 3.5.3.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008642 547.0
BYD3_k127_5527794_10 Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate K00872 - 2.7.1.39 0.0000000000000000000000000000000000000000000000000000000003094 214.0
BYD3_k127_5527794_11 Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme K02302 - 1.3.1.76,2.1.1.107,4.99.1.4 0.0000000000000000000000000000000000000000000000000000000912 201.0
BYD3_k127_5527794_12 - K02172 - - 0.000000000000000000000000000000000000000005112 166.0
BYD3_k127_5527794_13 Peptidase M56, BlaR1 - - - 0.00000000000000000000000000000000000002788 156.0
BYD3_k127_5527794_14 - K02172 - - 0.000000000000000000000000000000009129 137.0
BYD3_k127_5527794_15 Putative inner membrane exporter, YdcZ K09936 - - 0.00000000000000000000000000000137 128.0
BYD3_k127_5527794_16 - - - - 0.000000000000000000000000803 108.0
BYD3_k127_5527794_17 DNA primase, small subunit K01971 - 6.5.1.1 0.0000000000000000000008118 97.0
BYD3_k127_5527794_18 - K02172 - - 0.0000000000000000001285 98.0
BYD3_k127_5527794_19 DNA primase, small subunit - - - 0.000000000000001822 78.0
BYD3_k127_5527794_2 ATP ADP translocase K03301 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003381 539.0
BYD3_k127_5527794_20 - K02172 - - 0.0000000004524 64.0
BYD3_k127_5527794_21 Peptidase M56, BlaR1 - - - 0.00000001358 59.0
BYD3_k127_5527794_22 - K02172 - - 0.0000002026 59.0
BYD3_k127_5527794_3 Peptidase family M3 K01392 - 3.4.24.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006677 535.0
BYD3_k127_5527794_4 ATP dependent DNA ligase C terminal region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004518 517.0
BYD3_k127_5527794_5 Carbon-nitrogen hydrolase K12251 - 3.5.1.53 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003256 509.0
BYD3_k127_5527794_6 Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine K01733 - 4.2.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002063 498.0
BYD3_k127_5527794_7 PFAM Major facilitator superfamily K03301 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004204 332.0
BYD3_k127_5527794_8 TonB-dependent Receptor Plug K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002298 301.0
BYD3_k127_5527794_9 Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme K02302 - 1.3.1.76,2.1.1.107,4.99.1.4 0.000000000000000000000000000000000000000000000000000000000000000000002196 246.0
BYD3_k127_5534532_0 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001265 433.0
BYD3_k127_5534532_1 esterase of the alpha-beta hydrolase superfamily K07001 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009073 399.0
BYD3_k127_5534532_2 Aminopeptidase P, N-terminal domain K01262 - 3.4.11.9 0.000000000000000000000000000000000000000000000000000001353 210.0
BYD3_k127_5534532_3 - - - - 0.0000000000000000000000000000000000000000000002076 180.0
BYD3_k127_5534532_4 Ribosomal protein L11 methyltransferase K02687 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006479,GO:0006480,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0016278,GO:0016279,GO:0016740,GO:0016741,GO:0018011,GO:0018012,GO:0018022,GO:0018023,GO:0018193,GO:0018194,GO:0018205,GO:0019538,GO:0031365,GO:0032259,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0140096,GO:1901564 - 0.0000000000000000000000000006297 131.0
BYD3_k127_5544603_0 PFAM Radical SAM - - - 4.328e-218 693.0
BYD3_k127_5544603_10 - K02172 - - 0.000000000000000000000000000000000000000003362 170.0
BYD3_k127_5544603_11 Dehydrogenase K00117 - 1.1.5.2 0.00000000000000000000000000000000005777 141.0
BYD3_k127_5544603_12 PFAM Penicillinase repressor - - - 0.00000000000000000000000000000000006364 137.0
BYD3_k127_5544603_13 Protein of unknown function (DUF3738) - - - 0.0000000000000000000000002456 116.0
BYD3_k127_5544603_14 Translation initiation factor SUI1 K03113 - - 0.0000000000000000000000004238 108.0
BYD3_k127_5544603_15 Belongs to the sigma-70 factor family. ECF subfamily K03088 GO:0001101,GO:0005575,GO:0005623,GO:0005886,GO:0006355,GO:0008150,GO:0009410,GO:0009415,GO:0009628,GO:0009889,GO:0009891,GO:0009893,GO:0010035,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016020,GO:0019219,GO:0019222,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0042221,GO:0044464,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0071944,GO:0080090,GO:1901700,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141 - 0.000000000000000000002309 99.0
BYD3_k127_5544603_16 - - - - 0.00000000000000000009916 96.0
BYD3_k127_5544603_17 - - - - 0.0000000000000000004072 102.0
BYD3_k127_5544603_18 - - - - 0.000000000000000009903 86.0
BYD3_k127_5544603_2 DNA topological change K03168 - 5.99.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003391 299.0
BYD3_k127_5544603_20 - - - - 0.000000000000002711 80.0
BYD3_k127_5544603_21 BON domain K04065 - - 0.000001178 56.0
BYD3_k127_5544603_22 Metallo-beta-lactamase superfamily - - - 0.00003989 57.0
BYD3_k127_5544603_3 Transcriptional regulatory protein, C terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002547 246.0
BYD3_k127_5544603_4 Domain of unknown function (DUF4159) - - - 0.0000000000000000000000000000000000000000000000000000000000000006369 228.0
BYD3_k127_5544603_5 Protein of unknown function (DUF1587) - - - 0.0000000000000000000000000000000000000000000000000000000000008788 227.0
BYD3_k127_5544603_6 SnoaL-like domain - - - 0.00000000000000000000000000000000000000000000000000000000001465 210.0
BYD3_k127_5544603_7 PhoQ Sensor - - - 0.00000000000000000000000000000000000000000000000000000001151 220.0
BYD3_k127_5544603_8 BlaR1 peptidase M56 - - - 0.00000000000000000000000000000000000000000000000000001858 209.0
BYD3_k127_5544603_9 Glyoxalase-like domain K08234 - - 0.0000000000000000000000000000000000000000000000006078 196.0
BYD3_k127_5548231_0 PFAM Integrase catalytic - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001426 537.0
BYD3_k127_5548231_1 PFAM IstB domain protein ATP-binding protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001086 273.0
BYD3_k127_5569798_0 FtsX-like permease family K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002323 437.0
BYD3_k127_5569798_1 Bacterial regulatory protein, Fis family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002218 328.0
BYD3_k127_5569798_2 Metallo-beta-lactamase superfamily K17837 - 3.5.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000222 293.0
BYD3_k127_5569798_3 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004251 268.0
BYD3_k127_5569798_4 GDSL-like Lipase/Acylhydrolase K10804 - 3.1.1.5 0.00000000000000000000000000000000000000000000000000000005279 204.0
BYD3_k127_5569798_5 phosphatase 2C K20074 - 3.1.3.16 0.000000000000000000000000000000000000000000003085 178.0
BYD3_k127_5569798_6 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.0000000000000000000000000000000006004 132.0
BYD3_k127_5569798_7 PFAM 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK K00950 - 2.7.6.3 0.0000000000000000000000000000000006117 137.0
BYD3_k127_5569798_8 zinc ion binding K06204 - - 0.000000000000001313 83.0
BYD3_k127_5580654_0 Belongs to the glycosyl hydrolase 13 family K01214 - 3.2.1.68 2.795e-210 675.0
BYD3_k127_5580654_1 COG4772 Outer membrane receptor for Fe3 -dicitrate K16091 - - 1.83e-200 652.0
BYD3_k127_5580654_10 carboxypeptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002735 350.0
BYD3_k127_5580654_11 Beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001263 265.0
BYD3_k127_5580654_12 cytokinin biosynthetic process K06966 - 3.2.2.10 0.00000000000000000000000000000000000000000000000000000000000000001188 229.0
BYD3_k127_5580654_13 regulation of response to stimulus - - - 0.0000000000000000000000000000000000000000000000000000000001349 216.0
BYD3_k127_5580654_14 Putative FMN-binding domain K07734 - - 0.000000000000000000000000000000000000000000000000002724 189.0
BYD3_k127_5580654_15 - - - - 0.00000000000000000000000000000000000000000000000003764 202.0
BYD3_k127_5580654_16 Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively K01243 - 3.2.2.9 0.000000000000000000000000000000000000000000000000355 184.0
BYD3_k127_5580654_17 COG3209 Rhs family protein - - - 0.00000000000000000000000000000000000000000000003399 186.0
BYD3_k127_5580654_18 DinB family - - - 0.00000000000000000000000000000000000000000005023 174.0
BYD3_k127_5580654_19 Penicillinase repressor - - - 0.000000000000000000000000000000000000000002177 159.0
BYD3_k127_5580654_2 epoxide hydrolase K01253,K21159 - 3.3.2.9 2.124e-198 625.0
BYD3_k127_5580654_20 - K02172 - - 0.000000000000000000000000000000000000000003296 165.0
BYD3_k127_5580654_21 Tellurite resistance protein TerB - - - 0.00000000000000000000000000000000000000001473 158.0
BYD3_k127_5580654_22 DinB family - - - 0.00000000000000000000000000000000000003952 148.0
BYD3_k127_5580654_23 DinB family - - - 0.0000000000000000000000000000000000006445 148.0
BYD3_k127_5580654_24 Peptidase S8 and S53 subtilisin kexin sedolisin - - - 0.000000000000000000000000000000000008619 158.0
BYD3_k127_5580654_25 Peptidase M56, BlaR1 - - - 0.00000000000000000000000000000000431 139.0
BYD3_k127_5580654_26 Exopolysaccharide biosynthesis protein - - - 0.000000000000000000000000000000005996 147.0
BYD3_k127_5580654_27 Peptidase M56, BlaR1 - - - 0.0000000000000000000000000000001896 136.0
BYD3_k127_5580654_28 Transcriptional regulator PadR-like family - - - 0.0000000000000000000000000001378 117.0
BYD3_k127_5580654_3 serine-type peptidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003363 511.0
BYD3_k127_5580654_30 - - - - 0.0000000000000000000000003237 114.0
BYD3_k127_5580654_31 - - - - 0.0000000000000000000000224 111.0
BYD3_k127_5580654_32 oxidoreductase activity - - - 0.000000000000000000000172 104.0
BYD3_k127_5580654_33 - - - - 0.00000000000000000006169 100.0
BYD3_k127_5580654_34 Na( ) H( ) antiporter that extrudes sodium in exchange for external protons - - - 0.0000000000000000001835 97.0
BYD3_k127_5580654_35 - K02172 - - 0.00000000000000002823 93.0
BYD3_k127_5580654_36 - - - - 0.0000000000000001642 94.0
BYD3_k127_5580654_37 - - - - 0.0000000000000002659 85.0
BYD3_k127_5580654_38 Protein of unknown function (DUF3738) - - - 0.00000000000001871 77.0
BYD3_k127_5580654_39 TIGRFAM TonB K03832 - - 0.0000000000001335 80.0
BYD3_k127_5580654_4 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005265 469.0
BYD3_k127_5580654_40 - - - - 0.0000000000009782 75.0
BYD3_k127_5580654_41 Metal dependent phosphohydrolase K18967 - 2.7.7.65 0.000000003532 62.0
BYD3_k127_5580654_42 Protein of unknown function (DUF3738) - - - 0.0000001387 57.0
BYD3_k127_5580654_43 4'-phosphopantetheinyl transferase superfamily K06133 - - 0.000001383 55.0
BYD3_k127_5580654_44 Belongs to the DNA polymerase type-C family. DnaE2 subfamily K14162 - 2.7.7.7 0.000005616 57.0
BYD3_k127_5580654_45 PFAM AsmA family protein K07289,K07290 - - 0.00008888 55.0
BYD3_k127_5580654_5 dna ligase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001333 407.0
BYD3_k127_5580654_6 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005574 410.0
BYD3_k127_5580654_7 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004621 404.0
BYD3_k127_5580654_8 nucleoside-diphosphate sugar epimerase K07071 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001231 389.0
BYD3_k127_5580654_9 Asp/Glu/Hydantoin racemase K01779 - 5.1.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001431 353.0
BYD3_k127_5581031_0 Trypsin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001138 442.0
BYD3_k127_5581031_1 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000242 436.0
BYD3_k127_5581031_10 phospholipase Carboxylesterase - - - 0.0000000000000000000000009219 115.0
BYD3_k127_5581031_2 Zinc-binding dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001165 344.0
BYD3_k127_5581031_3 Putative esterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007652 332.0
BYD3_k127_5581031_4 Methylene-tetrahydromethanopterin dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001878 284.0
BYD3_k127_5581031_5 formaldehyde-activating enzyme K10713 - 4.2.1.147 0.0000000000000000000000000000000000000000000000000000000000000000004104 232.0
BYD3_k127_5581031_6 Protein of unknown function (DUF1464) - - - 0.0000000000000000000000000000000000000000000000000000000000000174 228.0
BYD3_k127_5581031_7 ATP-grasp domain K01499,K06913 - 3.5.4.27 0.000000000000000000000000000000000000000000000000000000004626 215.0
BYD3_k127_5581031_8 formylmethanofuran dehydrogenase, subunit K00201 - 1.2.7.12 0.00000000000000000000000000000000000000000000000000012 203.0
BYD3_k127_5581031_9 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain - - - 0.0000000000000000000000000007825 128.0
BYD3_k127_5614789_0 Peptidase family M48 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000015 348.0
BYD3_k127_5614789_1 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001 338.0
BYD3_k127_5659971_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 0.0 1189.0
BYD3_k127_5659971_1 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate K01681 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003730,GO:0003824,GO:0003994,GO:0005488,GO:0005506,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005829,GO:0005886,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0006629,GO:0006631,GO:0008150,GO:0008152,GO:0008198,GO:0009060,GO:0009987,GO:0010035,GO:0010038,GO:0010039,GO:0015980,GO:0016020,GO:0016829,GO:0016835,GO:0016836,GO:0016999,GO:0017144,GO:0019541,GO:0019679,GO:0019752,GO:0030312,GO:0030350,GO:0032787,GO:0040007,GO:0042221,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044255,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045333,GO:0046459,GO:0046872,GO:0046914,GO:0047456,GO:0048037,GO:0050896,GO:0051536,GO:0051538,GO:0051539,GO:0051540,GO:0055114,GO:0071704,GO:0071944,GO:0072350,GO:0097159,GO:1901363 4.2.1.3 0.0 1164.0
BYD3_k127_5659971_10 PBS lyase HEAT-like repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001107 529.0
BYD3_k127_5659971_12 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000194 437.0
BYD3_k127_5659971_13 Bacterial protein of unknown function (DUF885) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008739 418.0
BYD3_k127_5659971_14 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601,K03797 - 3.1.11.6,3.4.21.102 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007103 386.0
BYD3_k127_5659971_15 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002744 384.0
BYD3_k127_5659971_16 unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005705 388.0
BYD3_k127_5659971_17 Belongs to the peptidase M16 family K07263 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001041 340.0
BYD3_k127_5659971_18 antibiotic catabolic process K18235 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008303 326.0
BYD3_k127_5659971_19 YmdB-like protein K09769 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002707 320.0
BYD3_k127_5659971_2 Heat shock 70 kDa protein K04043 - - 4.433e-301 933.0
BYD3_k127_5659971_20 Trehalose utilisation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009812 325.0
BYD3_k127_5659971_21 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 GO:0003674,GO:0003824,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016740,GO:0016746,GO:0016747,GO:0019637,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.3.1.191 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007253 319.0
BYD3_k127_5659971_22 Beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009525 304.0
BYD3_k127_5659971_23 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 GO:0003674,GO:0005488,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008289,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0019637,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.4.1.182 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001304 303.0
BYD3_k127_5659971_24 HupE / UreJ protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006724 290.0
BYD3_k127_5659971_25 Domain of unknown function (DUF1730) K18979 - 1.17.99.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008086 287.0
BYD3_k127_5659971_26 Peptidase, M16 K07263 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002406 304.0
BYD3_k127_5659971_27 Provides the (R)-glutamate required for cell wall biosynthesis K01776 - 5.1.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006748 282.0
BYD3_k127_5659971_28 Methyltransferase, chemotaxis proteins K00575,K13486 - 2.1.1.80 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006787 278.0
BYD3_k127_5659971_29 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001542 291.0
BYD3_k127_5659971_3 Domain of unknown function (DUF5117) - - - 7.615e-298 939.0
BYD3_k127_5659971_30 Protein of unknown function (DUF3750) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003333 272.0
BYD3_k127_5659971_31 Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin K01151 - 3.1.21.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005688 286.0
BYD3_k127_5659971_32 Xylose isomerase-like TIM barrel K01816 - 5.3.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000004801 272.0
BYD3_k127_5659971_33 FtsJ-like methyltransferase K06442 - 2.1.1.226,2.1.1.227 0.00000000000000000000000000000000000000000000000000000000000000000000000000008793 265.0
BYD3_k127_5659971_34 Response regulator receiver - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001913 267.0
BYD3_k127_5659971_35 Belongs to the FPP GGPP synthase family K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.000000000000000000000000000000000000000000000000000000000000000000000000002439 263.0
BYD3_k127_5659971_36 exo-alpha-(2->6)-sialidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002241 254.0
BYD3_k127_5659971_37 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.0000000000000000000000000000000000000000000000000000000000000000002266 246.0
BYD3_k127_5659971_38 PFAM ATP-binding region, ATPase domain protein domain protein K07683 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000004606 219.0
BYD3_k127_5659971_39 LexA-binding, inner membrane-associated putative hydrolase K07038 - - 0.0000000000000000000000000000000000000000000000000000000004781 213.0
BYD3_k127_5659971_4 Peptidase family M49 - - - 9.522e-239 751.0
BYD3_k127_5659971_40 Memo-like protein K06990 - - 0.000000000000000000000000000000000000000000000000000000003958 221.0
BYD3_k127_5659971_41 CheC inhibitor of MCP methylation K03410 - - 0.000000000000000000000000000000000000000000000000000000006351 205.0
BYD3_k127_5659971_42 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000004877 192.0
BYD3_k127_5659971_43 Carboxylesterase family - - - 0.0000000000000000000000000000000000000000000009 182.0
BYD3_k127_5659971_44 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 GO:0003674,GO:0003824,GO:0004309,GO:0005488,GO:0005515,GO:0006139,GO:0006213,GO:0006220,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008252,GO:0008253,GO:0008254,GO:0009056,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009125,GO:0009129,GO:0009131,GO:0009158,GO:0009161,GO:0009164,GO:0009166,GO:0009173,GO:0009175,GO:0009218,GO:0009222,GO:0009259,GO:0009261,GO:0009987,GO:0016311,GO:0016462,GO:0016787,GO:0016788,GO:0016791,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0030145,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0034656,GO:0042454,GO:0042578,GO:0042802,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0046049,GO:0046050,GO:0046131,GO:0046133,GO:0046135,GO:0046434,GO:0046483,GO:0046700,GO:0046872,GO:0046914,GO:0055086,GO:0071704,GO:0072527,GO:0072529,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1901657,GO:1901658 3.1.3.5 0.000000000000000000000000000000000000000000001506 176.0
BYD3_k127_5659971_45 PFAM AMMECR1 domain protein K09141 - - 0.0000000000000000000000000000000000000000001059 165.0
BYD3_k127_5659971_46 Two component signalling adaptor domain K03408 - - 0.000000000000000000000000000000000000000000393 164.0
BYD3_k127_5659971_47 cheY-homologous receiver domain K03413 - - 0.000000000000000000000000000000000000002518 151.0
BYD3_k127_5659971_48 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000000000000000000000000000008556 146.0
BYD3_k127_5659971_49 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000133 156.0
BYD3_k127_5659971_5 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002654 590.0
BYD3_k127_5659971_50 Outer membrane efflux protein K15725 - - 0.0000000000000000000000000000000000001698 156.0
BYD3_k127_5659971_51 S1 P1 Nuclease - - - 0.000000000000000000000000000000000004252 149.0
BYD3_k127_5659971_52 - - - - 0.000000000000000000000000000000000005709 148.0
BYD3_k127_5659971_53 phosphorelay signal transduction system - - - 0.0000000000000000000000000000001016 134.0
BYD3_k127_5659971_54 PFAM SMP-30 Gluconolaconase K08685 - 1.4.9.1 0.000000000000000000000000000001928 137.0
BYD3_k127_5659971_55 Belongs to the UPF0301 (AlgH) family K07735 - - 0.000000000000000000000000004464 117.0
BYD3_k127_5659971_56 - - - - 0.000000000000000000000005474 116.0
BYD3_k127_5659971_58 Belongs to the eIF-2B alpha beta delta subunits family K03680 - - 0.0000000000000000000321 103.0
BYD3_k127_5659971_59 - - - - 0.000000000000000004285 93.0
BYD3_k127_5659971_6 Glucose / Sorbosone dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000178 561.0
BYD3_k127_5659971_60 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.000000000000000008223 86.0
BYD3_k127_5659971_62 Hsp20/alpha crystallin family K13993 - - 0.0000000000003975 76.0
BYD3_k127_5659971_63 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.000000000003464 70.0
BYD3_k127_5659971_64 - - - - 0.0000000000156 71.0
BYD3_k127_5659971_65 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798,K15727 - - 0.00000000003369 75.0
BYD3_k127_5659971_66 Matrixin - - - 0.00000000007223 74.0
BYD3_k127_5659971_67 - - - - 0.0000000001237 68.0
BYD3_k127_5659971_68 Domain of unknown function (DUF4440) - - - 0.000000009264 68.0
BYD3_k127_5659971_7 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003199 567.0
BYD3_k127_5659971_70 PFAM Haloacid dehalogenase domain protein hydrolase type 3 K07026,K15918 - 2.7.1.31,3.1.3.70 0.000001324 58.0
BYD3_k127_5659971_71 - - - - 0.00001984 53.0
BYD3_k127_5659971_72 Protein of unknown function (DUF3738) - - - 0.00008467 50.0
BYD3_k127_5659971_8 Acetyl-coenzyme A transporter 1 K08218 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004763 535.0
BYD3_k127_5659971_9 Signal transducing histidine kinase, homodimeric domain K03407 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008957 536.0
BYD3_k127_5660480_0 DNA topological change K03168 - 5.99.1.2 1.135e-209 677.0
BYD3_k127_5660480_1 Protein of unknown function (DUF1552) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000314 450.0
BYD3_k127_5660480_2 ankyrin repeat K15503 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001515 418.0
BYD3_k127_5660480_3 TonB-dependent receptor - - - 0.0000000000000000000000000000000001628 154.0
BYD3_k127_5676498_0 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007981 415.0
BYD3_k127_5676498_1 Glutamine cyclotransferase K00683 - 2.3.2.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003264 296.0
BYD3_k127_5676498_2 PFAM Methyltransferase type 11 - - - 0.000000000000000000000000000000000000000000000000000000003988 218.0
BYD3_k127_5676498_3 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 - 2.7.1.148 0.000000000000000000000000000000000000000000000000000008069 206.0
BYD3_k127_5676498_4 PFAM glycosyl transferase family 39 - - - 0.0000000000000000000000000000000000000000000000000035 203.0
BYD3_k127_5676498_5 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 - - 0.00000000000000000000000000000000000000000000000001261 188.0
BYD3_k127_5676498_6 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 GO:0003674,GO:0003824,GO:0004045,GO:0016787,GO:0016788,GO:0052689,GO:0140098,GO:0140101 3.1.1.29 0.00000000000000000000000000000000000000000000001721 182.0
BYD3_k127_5676498_7 Binds together with S18 to 16S ribosomal RNA K02990 - - 0.000000000000000000001968 101.0
BYD3_k127_5676498_8 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 - - 0.0000002968 53.0
BYD3_k127_5862108_0 MacB-like periplasmic core domain - - - 2.137e-201 657.0
BYD3_k127_5862108_1 O-methyltransferase K00588 - 2.1.1.104 0.00000000000000000000000000000000000000000000000000000000000000000000009175 245.0
BYD3_k127_5862108_10 Domain of unknown function (DUF4115) - - - 0.000001805 59.0
BYD3_k127_5862108_2 methyltransferase - - - 0.000000000000000000000000000000000000000001295 165.0
BYD3_k127_5862108_3 - - - - 0.000000000000000000000000005227 119.0
BYD3_k127_5862108_5 DinB superfamily - - - 0.0000000000000002417 87.0
BYD3_k127_5862108_6 - - - - 0.00000000001252 78.0
BYD3_k127_5862108_7 TIGRFAM 40-residue YVTN family beta-propeller repeat protein - - - 0.000000000605 72.0
BYD3_k127_5862108_8 - - - - 0.000000004246 70.0
BYD3_k127_5862108_9 deoxyhypusine monooxygenase activity - - - 0.0000001174 65.0
BYD3_k127_5872535_0 DEAD/H associated K03724 - - 0.0 1449.0
BYD3_k127_5872535_1 peptidase S9A prolyl oligopeptidase domain protein beta-propeller K01322 - 3.4.21.26 0.0 1113.0
BYD3_k127_5872535_10 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes K03118 - - 0.000000000000000000000000000000000000000000000001163 184.0
BYD3_k127_5872535_11 DNA-templated transcription, initiation K03088 - - 0.000000000000000000000000000000000000000000000009466 187.0
BYD3_k127_5872535_12 - K02172 - - 0.0000000000000000000000000000000000000006915 159.0
BYD3_k127_5872535_13 Protein of unknown function (DUF3738) - - - 0.0000000000000000000000000000000005348 142.0
BYD3_k127_5872535_14 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000277 138.0
BYD3_k127_5872535_15 COG0666 FOG Ankyrin repeat - - - 0.000000000000000000000000001504 125.0
BYD3_k127_5872535_17 - - - - 0.000000000000000000002628 103.0
BYD3_k127_5872535_18 - - - - 0.0000000000000000001377 103.0
BYD3_k127_5872535_19 YceI-like domain - - - 0.0000000000002515 79.0
BYD3_k127_5872535_2 DNA topological change K03168 - 5.99.1.2 2.937e-231 746.0
BYD3_k127_5872535_21 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.00000001634 57.0
BYD3_k127_5872535_22 Protein of unknown function (DUF3738) - - - 0.0001393 44.0
BYD3_k127_5872535_23 Type IV pilus assembly - - - 0.0004488 47.0
BYD3_k127_5872535_3 Alpha/beta hydrolase family - - - 9.588e-222 728.0
BYD3_k127_5872535_4 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001056 490.0
BYD3_k127_5872535_5 Protein of unknown function (DUF1552) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005761 394.0
BYD3_k127_5872535_6 Pirin C-terminal cupin domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005631 312.0
BYD3_k127_5872535_7 amidohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001548 308.0
BYD3_k127_5872535_8 protein kinase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001423 292.0
BYD3_k127_5872535_9 Ankyrin repeat - - - 0.00000000000000000000000000000000000000000000000000000003041 220.0
BYD3_k127_5875395_0 PQQ enzyme repeat K00114 - 1.1.2.8 5.084e-206 664.0
BYD3_k127_5875395_1 Dehydrogenase K00117 - 1.1.5.2 2.794e-203 654.0
BYD3_k127_5875395_10 sodium ABC transporter, permease K09696 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004354 308.0
BYD3_k127_5875395_11 Serine aminopeptidase, S33 K01055 - 3.1.1.24 0.00000000000000000000000000000000000000000000000000000000000000000000000009004 256.0
BYD3_k127_5875395_12 Sigma-54 interaction domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000006665 242.0
BYD3_k127_5875395_13 PFAM GGDEF domain containing protein - - - 0.000000000000000000000000000000000000000000000000000002364 206.0
BYD3_k127_5875395_14 eight transmembrane protein EpsH - - - 0.000000000000000000000000000000000000000000000000004712 193.0
BYD3_k127_5875395_15 bleomycin resistance protein K01759 - 4.4.1.5 0.00000000000000000000000000000000000000001577 155.0
BYD3_k127_5875395_16 Transcription termination factor nusG - - - 0.00000000000000000000000000000001163 133.0
BYD3_k127_5875395_17 PFAM TonB-dependent Receptor Plug Domain - - - 0.0000000000000000000000000000001775 144.0
BYD3_k127_5875395_18 PFAM TonB-dependent Receptor Plug Domain - - - 0.0000000000000000000000000000005399 143.0
BYD3_k127_5875395_19 - - - - 0.00000000000000000000003226 105.0
BYD3_k127_5875395_2 Dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001311 595.0
BYD3_k127_5875395_20 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K02481 - - 0.0000000000001774 79.0
BYD3_k127_5875395_21 - - - - 0.000000000001375 79.0
BYD3_k127_5875395_22 - - - - 0.0000000005207 63.0
BYD3_k127_5875395_23 zinc metalloprotease - - - 0.00000001401 64.0
BYD3_k127_5875395_24 Fibronectin type III domain protein - - - 0.000005699 56.0
BYD3_k127_5875395_25 CHRD domain containing protein - - - 0.000009408 54.0
BYD3_k127_5875395_26 Domain of unknown function (DUF4115) - - - 0.00004561 56.0
BYD3_k127_5875395_27 Domain of unknown function (DUF4115) K15539 - - 0.0006609 49.0
BYD3_k127_5875395_3 4-oxalomesaconate hydratase K10220 - 4.2.1.83 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002329 523.0
BYD3_k127_5875395_4 hydrolases or acyltransferases (alpha beta hydrolase superfamily) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007248 435.0
BYD3_k127_5875395_5 serine-type peptidase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001309 410.0
BYD3_k127_5875395_6 HD domain K07814 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003006 351.0
BYD3_k127_5875395_7 ABC transporter K09697 - 3.6.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002842 338.0
BYD3_k127_5875395_8 HTH domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007168 337.0
BYD3_k127_5875395_9 ribonuclease inhibitor activity K10218 - 4.1.3.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006792 317.0
BYD3_k127_5876368_0 Alpha amylase, catalytic domain K06044 - 5.4.99.15 3.137e-289 917.0
BYD3_k127_5876368_1 DNA topological change K03168 - 5.99.1.2 2.154e-199 650.0
BYD3_k127_5876368_10 esterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001398 267.0
BYD3_k127_5876368_11 Ankyrin repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005716 263.0
BYD3_k127_5876368_12 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000007536 212.0
BYD3_k127_5876368_13 Histidine kinase K10681 - 2.7.13.3 0.0000000000000000000000000000000000000000000000005397 194.0
BYD3_k127_5876368_14 - - - - 0.000000000000000000000000000006293 129.0
BYD3_k127_5876368_15 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.0000000000000000000000000000135 136.0
BYD3_k127_5876368_16 Protein of unknown function (DUF3738) - - - 0.00000000000000000000001045 112.0
BYD3_k127_5876368_17 - - - - 0.0000000000000000000003001 104.0
BYD3_k127_5876368_18 - - - - 0.000000000000000000003924 106.0
BYD3_k127_5876368_19 - - - - 0.0000000000000003255 84.0
BYD3_k127_5876368_2 ASPIC and UnbV - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004291 546.0
BYD3_k127_5876368_20 Response regulator receiver - - - 0.00000000401 62.0
BYD3_k127_5876368_21 - - - - 0.00000001056 67.0
BYD3_k127_5876368_22 Domain of unknown function (DUF4956) - - - 0.00000001312 64.0
BYD3_k127_5876368_23 solute binding protein K02035 - - 0.0000002301 62.0
BYD3_k127_5876368_24 Bacterial transcriptional activator domain - - - 0.000002049 60.0
BYD3_k127_5876368_25 TonB-dependent receptor - - - 0.0002641 50.0
BYD3_k127_5876368_3 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002862 435.0
BYD3_k127_5876368_4 PLD-like domain K06131 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006655 386.0
BYD3_k127_5876368_5 Sugar (and other) transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001719 390.0
BYD3_k127_5876368_6 Catalytic LigB subunit of aromatic ring-opening dioxygenase K15777 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001457 370.0
BYD3_k127_5876368_7 long-chain fatty acid transporting porin activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005388 344.0
BYD3_k127_5876368_8 Calcineurin-like phosphoesterase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001644 331.0
BYD3_k127_5876368_9 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002821 327.0
BYD3_k127_5878785_0 Angiotensin-converting enzyme K01283 - 3.4.15.1 8.093e-251 786.0
BYD3_k127_5878785_1 Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1- 4)- glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB K16147 - 2.4.99.16 4.305e-234 744.0
BYD3_k127_5878785_2 trehalose biosynthetic process K00700,K05343,K16146 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005975,GO:0005984,GO:0005991,GO:0005992,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009058,GO:0009311,GO:0009312,GO:0009987,GO:0016020,GO:0016051,GO:0016310,GO:0034637,GO:0040007,GO:0044237,GO:0044238,GO:0044249,GO:0044262,GO:0044424,GO:0044444,GO:0044464,GO:0046351,GO:0046835,GO:0071704,GO:0071944,GO:1901576 2.4.1.18,2.7.1.175,3.2.1.1,5.4.99.16 1.143e-224 700.0
BYD3_k127_5878785_3 PEP-utilising enzyme, mobile domain K01007 - 2.7.9.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007854 385.0
BYD3_k127_5878785_4 Pyruvate phosphate dikinase, PEP/pyruvate binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000004121 222.0
BYD3_k127_5878785_5 Major facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000001132 207.0
BYD3_k127_5878785_6 PFAM Cupin 2 conserved barrel domain protein - - - 0.000000000000000005171 89.0
BYD3_k127_5878785_7 Uncharacterised signal transduction histidine kinase domain (DUF2222) - - - 0.00000000000000002063 93.0
BYD3_k127_5897460_0 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002467 407.0
BYD3_k127_5897460_1 response regulator K02481 - - 0.00000000000000000000000000000000000000000000000000000000000000009019 252.0
BYD3_k127_5897460_2 Domain of unknown function (DUF4399) - - - 0.000000000000000000000000007117 119.0
BYD3_k127_5930256_0 Protein kinase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000161 318.0
BYD3_k127_5930256_1 ATP ADP translocase K03301 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004696 311.0
BYD3_k127_5930256_3 Acid phosphatase homologues - - - 0.00000000000000002369 93.0
BYD3_k127_5930256_4 Alpha/beta hydrolase family - - - 0.00000000002748 72.0
BYD3_k127_5930256_5 outer membrane protein protective antigen - - - 0.00007578 56.0
BYD3_k127_593644_0 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001181 379.0
BYD3_k127_593644_1 Two component, sigma54 specific, transcriptional regulator, Fis family K07712 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001365 379.0
BYD3_k127_593644_2 Belongs to the UPF0173 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000008058 286.0
BYD3_k127_593644_3 aldo-keto reductase (NADP) activity K05275 - 1.1.1.65 0.00000000000000000000000000000000000000000000000000000000000000001999 234.0
BYD3_k127_593644_4 GAF domain - - - 0.0000000000000000000000000000000000000108 158.0
BYD3_k127_593644_5 cytochrome c oxidase subunit II K02275 - 1.9.3.1 0.000000000001289 73.0
BYD3_k127_593644_6 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.00000000001867 75.0
BYD3_k127_5947107_0 Polysaccharide deacetylase - - - 0.000000000000000000000009093 115.0
BYD3_k127_5947107_1 Nodulation protein S (NodS) - - - 0.000000000000000003556 88.0
BYD3_k127_5947107_2 COG0457 FOG TPR repeat - - - 0.00005458 49.0
BYD3_k127_5950033_0 Dehydrogenase K00117 - 1.1.5.2 1.782e-226 734.0
BYD3_k127_5950033_1 2-keto-3-deoxy-L-rhamnonate aldolase activity K02510 - 4.1.2.52 0.0000000000000000000000000000000000000000000000000000000000000000000000000001742 271.0
BYD3_k127_5950033_2 Cupin domain - - - 0.000000000000000000000000000000000000000000000000000000002554 213.0
BYD3_k127_5950033_3 4fe-4S ferredoxin, iron-sulfur binding domain protein K03388,K16885,K16886 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.00004249 47.0
BYD3_k127_5988685_0 Protein of unknown function (DUF3738) - - - 0.00000000000000000000000000000006363 137.0
BYD3_k127_5988685_1 Domain of unknown function DUF302 - - - 0.0000000000000000000000005376 107.0
BYD3_k127_5988685_2 PFAM Mo-dependent nitrogenase - - - 0.00000000000007352 78.0
BYD3_k127_5988685_3 Protein of unknown function (DUF3738) - - - 0.0000000002561 66.0
BYD3_k127_6001828_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 1.944e-281 874.0
BYD3_k127_6001828_1 Amidohydrolase family K01468 - 3.5.2.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001168 367.0
BYD3_k127_6001828_2 2-keto-4-pentenoate hydratase K02554 - 4.2.1.80 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007031 304.0
BYD3_k127_6001828_3 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.0000000000000000000000000000000000000000000000000000000001293 211.0
BYD3_k127_6001828_4 Peptidase M56, BlaR1 - - - 0.00000000000000000000000000000000000000001605 164.0
BYD3_k127_6001828_5 Belongs to the UPF0235 family K09131 - - 0.000000000000000000216 91.0
BYD3_k127_6001828_6 domain protein - - - 0.000000000007326 79.0
BYD3_k127_6001828_7 Formiminotransferase-cyclodeaminase K01746 - 4.3.1.4 0.0000000006758 68.0
BYD3_k127_6022827_0 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 4.967e-260 819.0
BYD3_k127_6022827_1 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 8.53e-207 676.0
BYD3_k127_6022827_10 - - - - 0.0000000008241 69.0
BYD3_k127_6022827_11 Cytochrome C oxidase subunit II, periplasmic domain K00376 - 1.7.2.4 0.00009244 50.0
BYD3_k127_6022827_2 Required for chromosome condensation and partitioning K03529 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004993 435.0
BYD3_k127_6022827_3 Peptidase M48 K06013 - 3.4.24.84 0.000000000000000000000000000000000000000000000000000000000000000000000000004452 265.0
BYD3_k127_6022827_4 DHH family K06881 - 3.1.13.3,3.1.3.7 0.000000000000000000000000000000000000000000000000000000000000000000001099 248.0
BYD3_k127_6022827_5 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 - 5.4.99.25 0.000000000000000000000000000000000000000000000000000006397 201.0
BYD3_k127_6022827_6 Participates in both transcription termination and antitermination K02600 - - 0.00000000000000000000000000000000000000000000000000001332 194.0
BYD3_k127_6022827_7 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000002042 134.0
BYD3_k127_6022827_8 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.0000000000000000000000000006581 122.0
BYD3_k127_6022827_9 TIGRFAM VWFA-related Acidobacterial domain - - - 0.0000000000000000376 94.0
BYD3_k127_6058574_0 Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002681 406.0
BYD3_k127_6058574_1 Glutamate synthase K00265,K00284 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006520,GO:0006536,GO:0006537,GO:0006541,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0015930,GO:0016020,GO:0016053,GO:0016491,GO:0016638,GO:0019676,GO:0019740,GO:0019752,GO:0040007,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.4.1.13,1.4.1.14,1.4.7.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007687 298.0
BYD3_k127_6058574_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000009124 257.0
BYD3_k127_6098043_0 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004532 586.0
BYD3_k127_6098043_1 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002116 557.0
BYD3_k127_6098043_10 Uracil DNA glycosylase superfamily K21929 - 3.2.2.27 0.00000000000000000000000000000000000000000000000000000000000000000001141 243.0
BYD3_k127_6098043_11 Peptidase family M50 - - - 0.0000000000000000000000000000000000000000000000000000000000000000001336 242.0
BYD3_k127_6098043_12 Essential for recycling GMP and indirectly, cGMP K00942 - 2.7.4.8 0.0000000000000000000000000000000000000000000000000000001169 201.0
BYD3_k127_6098043_13 Pyridoxal-dependent decarboxylase, C-terminal sheet domain K01581 - 4.1.1.17 0.0000000000000000000000000000000000000000000000000000003102 208.0
BYD3_k127_6098043_14 PFAM Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000003413 192.0
BYD3_k127_6098043_15 Domain of unknown function (DUF1732) - - - 0.000000000000000000000000000000000000000000000002678 184.0
BYD3_k127_6098043_16 Glycosyl transferase family group 2 K07011 - - 0.0000000000000000000000000000000000000000006854 168.0
BYD3_k127_6098043_17 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000003685 153.0
BYD3_k127_6098043_18 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000003281 139.0
BYD3_k127_6098043_19 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000002259 142.0
BYD3_k127_6098043_2 Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation K06147,K11085 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000835 479.0
BYD3_k127_6098043_20 bacterial (prokaryotic) histone like domain K03530 - - 0.0000000000000000000000000000006786 126.0
BYD3_k127_6098043_21 CDP-alcohol phosphatidyltransferase K00995,K08744 - 2.7.8.41,2.7.8.5 0.00000000000000000000000000003141 124.0
BYD3_k127_6098043_22 - - - - 0.0000000000000000000000000001406 126.0
BYD3_k127_6098043_23 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.0000000000005268 71.0
BYD3_k127_6098043_24 Glycosyl transferase family 41 - - - 0.000003193 59.0
BYD3_k127_6098043_3 GDP-mannose 4,6 dehydratase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003382 460.0
BYD3_k127_6098043_4 Bacterial sugar transferase K03606 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001065 426.0
BYD3_k127_6098043_5 Belongs to the NAD(P)-dependent epimerase dehydratase family K01784 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001932 364.0
BYD3_k127_6098043_6 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K01598,K13038 - 4.1.1.36,6.3.2.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004663 360.0
BYD3_k127_6098043_7 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001598 355.0
BYD3_k127_6098043_8 Glycosyltransferase Family 4 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008559 351.0
BYD3_k127_6098043_9 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005056 306.0
BYD3_k127_6129994_0 MutS domain I K03555 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 1.958e-264 840.0
BYD3_k127_6129994_1 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008003 400.0
BYD3_k127_6129994_3 Glycoprotease family K01409,K14742 GO:0002949,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006508,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0019538,GO:0034470,GO:0034641,GO:0034660,GO:0042802,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070011,GO:0070525,GO:0071704,GO:0090304,GO:0140096,GO:1901360,GO:1901564 2.3.1.234 0.00006493 48.0
BYD3_k127_6129994_4 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - GO:0005575,GO:0005623,GO:0008150,GO:0009987,GO:0016043,GO:0022607,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043933,GO:0044085,GO:0044464,GO:0051259,GO:0051260,GO:0051301,GO:0065003,GO:0071840 - 0.0004148 51.0
BYD3_k127_6175374_0 Fumarate reductase flavoprotein C-term K00239 - 1.3.5.1,1.3.5.4 4.113e-294 918.0
BYD3_k127_6175374_1 2Fe-2S iron-sulfur cluster binding domain K00240 - 1.3.5.1,1.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002087 387.0
BYD3_k127_6175374_2 ATPase activity K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002386 292.0
BYD3_k127_6175374_3 efflux transmembrane transporter activity - - - 0.000000000000000000000000000001704 138.0
BYD3_k127_6175374_4 Peptidase M56, BlaR1 - - - 0.000000000000000000000000000008741 132.0
BYD3_k127_6175374_5 Peptidase M56, BlaR1 - - - 0.00000000000000000000000001488 126.0
BYD3_k127_6175374_6 membrane - - - 0.00000000000000000002468 94.0
BYD3_k127_6180680_0 Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity K03782 GO:0000302,GO:0003674,GO:0003824,GO:0004096,GO:0004601,GO:0005488,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009056,GO:0009636,GO:0009987,GO:0010035,GO:0016209,GO:0016491,GO:0016684,GO:0016999,GO:0017001,GO:0017144,GO:0020037,GO:0033554,GO:0034599,GO:0034614,GO:0035690,GO:0042221,GO:0042493,GO:0042542,GO:0042737,GO:0042743,GO:0042744,GO:0044237,GO:0044248,GO:0044424,GO:0044444,GO:0044464,GO:0046677,GO:0046906,GO:0048037,GO:0050896,GO:0051186,GO:0051187,GO:0051716,GO:0055114,GO:0070301,GO:0070887,GO:0071236,GO:0072593,GO:0097159,GO:0097237,GO:0098754,GO:0098869,GO:1901363,GO:1901700,GO:1901701,GO:1990748 1.11.1.21 0.0 1131.0
BYD3_k127_6180680_1 Cys/Met metabolism PLP-dependent enzyme K01740 - 2.5.1.49 2.788e-242 753.0
BYD3_k127_6180680_10 Ferric uptake regulator family K22297 - - 0.000000000000000000000000000000000000000000000000000000002259 204.0
BYD3_k127_6180680_11 dienelactone hydrolase - - - 0.00000000000000000000000000000000000000000000001816 183.0
BYD3_k127_6180680_12 - - - - 0.000000000000000000000000000000000000000000006254 173.0
BYD3_k127_6180680_13 Endoribonuclease L-PSP - - - 0.0000000000000000000000000000000000000000000116 165.0
BYD3_k127_6180680_14 YjbR - - - 0.00000000000000000000000000000000002389 144.0
BYD3_k127_6180680_15 Domain of unknown function (DU1801) - - - 0.000000000000000000000000000000004762 137.0
BYD3_k127_6180680_16 Protein of unknown function (DUF3738) K02172 - - 0.00000000000000000000000000003554 128.0
BYD3_k127_6180680_17 Protein of unknown function (DUF3738) - - - 0.0000000000000000000000000000542 128.0
BYD3_k127_6180680_18 - - - - 0.00000000000000000005728 96.0
BYD3_k127_6180680_19 Acetyltransferase (GNAT) domain - - - 0.0000000000000000284 88.0
BYD3_k127_6180680_2 Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine K00641 - 2.3.1.31 3.217e-214 672.0
BYD3_k127_6180680_20 - - - - 0.0000000000357 66.0
BYD3_k127_6180680_21 - - - - 0.00000006845 58.0
BYD3_k127_6180680_3 Pyridine nucleotide-disulphide oxidoreductase K07222 - - 1.093e-204 643.0
BYD3_k127_6180680_4 Pirin C-terminal cupin domain K06911 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002453 490.0
BYD3_k127_6180680_5 Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001707 404.0
BYD3_k127_6180680_6 O-methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000172 303.0
BYD3_k127_6180680_7 OsmC-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006349 294.0
BYD3_k127_6180680_8 CoA binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009452 271.0
BYD3_k127_6180680_9 nitric oxide dioxygenase activity K00523 - 1.17.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000008521 263.0
BYD3_k127_6182826_0 amidase activity K01426 - 3.5.1.4 1.583e-243 769.0
BYD3_k127_6182826_1 Belongs to the TPP enzyme family K01576 - 4.1.1.7 2.074e-208 660.0
BYD3_k127_6182826_10 PFAM binding-protein-dependent transport systems inner membrane component K02025,K10237 - - 0.000000000000000000000000000000000000000000000000000000000000000002913 237.0
BYD3_k127_6182826_11 COG0569 K transport systems NAD-binding component K03499 - - 0.00000000000000000000000000000000000000000000000000000000000193 220.0
BYD3_k127_6182826_12 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000000000000000000000000000000000000000131 192.0
BYD3_k127_6182826_13 PFAM Exonuclease, RNase T and DNA polymerase III K02342 - 2.7.7.7 0.000000000000000000000000000000000000000000002152 172.0
BYD3_k127_6182826_14 TonB-dependent receptor - - - 0.0000000000000000000000000000000000000000006664 182.0
BYD3_k127_6182826_15 Peptidase MA superfamily - - - 0.000000000000000000000000000000000000006759 159.0
BYD3_k127_6182826_16 peroxiredoxin activity - - - 0.0000000000000000000000000000001246 132.0
BYD3_k127_6182826_17 ClpX C4-type zinc finger - - - 0.0000000000000000000000000000006389 128.0
BYD3_k127_6182826_18 membrane K08972 - - 0.0000000000000000000000000009205 117.0
BYD3_k127_6182826_19 - - - - 0.00000000000000000000000001857 113.0
BYD3_k127_6182826_2 PFAM Copper type II ascorbate-dependent monooxygenase, C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001799 439.0
BYD3_k127_6182826_20 - - - - 0.00000000000000000000006831 109.0
BYD3_k127_6182826_23 Bacterial membrane protein YfhO - - - 0.0000000000009165 81.0
BYD3_k127_6182826_24 Acetyltransferase (GNAT) family - - - 0.00000004132 61.0
BYD3_k127_6182826_26 PFAM Bacterial membrane protein YfhO - - - 0.0000009867 62.0
BYD3_k127_6182826_3 CotH kinase protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009665 417.0
BYD3_k127_6182826_4 carboxymethylenebutenolidase activity K01061 - 3.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000249 398.0
BYD3_k127_6182826_5 Membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001125 398.0
BYD3_k127_6182826_6 Belongs to the ABC transporter superfamily K10112 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005176 333.0
BYD3_k127_6182826_7 PFAM extracellular solute-binding protein family 1 K02027,K10236 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002326 298.0
BYD3_k127_6182826_8 binding-protein-dependent transport systems inner membrane component K02026 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002552 276.0
BYD3_k127_6182826_9 Bacterial transcription activator, effector binding domain K13652 - - 0.00000000000000000000000000000000000000000000000000000000000000000001903 244.0
BYD3_k127_6203954_0 protein import - - - 0.000000000000000000000000000000003274 137.0
BYD3_k127_6203954_1 phospholipase Carboxylesterase - - - 0.00000000000000000000008086 109.0
BYD3_k127_6203954_2 - - - - 0.000000000000000002045 93.0
BYD3_k127_6207792_0 Bacterial protein of unknown function (DUF885) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002427 438.0
BYD3_k127_6207792_1 X-Pro dipeptidyl-peptidase (S15 family) K01061 - 3.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002225 396.0
BYD3_k127_6207792_2 Phosphatidylethanolamine-binding protein - - - 0.0000000000000000000000000000001434 132.0
BYD3_k127_6207792_3 IgA Peptidase M64 - - - 0.000000000000000000000000000001313 123.0
BYD3_k127_6207792_4 pyrroloquinoline quinone binding - - - 0.0000000000000000000003823 100.0
BYD3_k127_6211276_0 DNA topological change K03168 - 5.99.1.2 1.711e-237 759.0
BYD3_k127_6211276_1 SMART Elongator protein 3 MiaB NifB - - - 4.947e-212 668.0
BYD3_k127_6211276_2 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009511 616.0
BYD3_k127_6211276_3 SMP-30/Gluconolaconase/LRE-like region K01053,K14274 - 3.1.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003724 498.0
BYD3_k127_6211276_4 Protein of unknown function (DUF1552) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003074 441.0
BYD3_k127_6211276_5 ankyrin repeat K15503 - - 0.00000000000000000000000000000000000000000000000000000000001739 218.0
BYD3_k127_6223180_0 Belongs to the RtcB family K14415 - 6.5.1.3 5.464e-219 687.0
BYD3_k127_6223180_1 PFAM Archease protein family (DUF101 UPF0211) K00974 - 2.7.7.72 0.00000000000000000000000000000000000000000000001329 175.0
BYD3_k127_6237383_0 Sigma-70, region 4 type 2 - - - 0.00000000000000000000000000000000000000000000000000008373 195.0
BYD3_k127_6237383_1 - K02172 - - 0.000000000000000000000000000000000000000000004532 175.0
BYD3_k127_6237383_2 Histidine kinase - - - 0.00000000000000000000000000001611 132.0
BYD3_k127_6237383_3 Metallo-beta-lactamase superfamily - - - 0.0000000000002703 78.0
BYD3_k127_6237383_4 C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex K00406 - - 0.0000001315 56.0
BYD3_k127_6273773_0 non-ribosomal peptide synthetase - - - 0.0 2437.0
BYD3_k127_6273773_1 PFAM short-chain dehydrogenase reductase SDR - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006252 286.0
BYD3_k127_6273773_2 glycosyl transferase family - - - 0.00000000000000000000000000000000000000836 163.0
BYD3_k127_6339207_0 Alpha-L-arabinofuranosidase B, catalytic - - - 4.756e-229 745.0
BYD3_k127_6339207_1 PFAM sulfatase K01130 - 3.1.6.1 1.995e-209 666.0
BYD3_k127_6339207_10 NIF3 (NGG1p interacting factor 3) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001911 334.0
BYD3_k127_6339207_11 Belongs to the glycosyl hydrolase 13 family K07214 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001019 306.0
BYD3_k127_6339207_12 COG1680 Beta-lactamase class C and other penicillin binding proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001657 298.0
BYD3_k127_6339207_13 Metallo-beta-lactamase superfamily K17837 - 3.5.2.6 0.000000000000000000000000000000000000000000001047 180.0
BYD3_k127_6339207_14 Parallel beta-helix repeats - - - 0.0000000000001022 73.0
BYD3_k127_6339207_15 - - - - 0.0000000000009374 78.0
BYD3_k127_6339207_16 glyoxalase bleomycin resistance protein dioxygenase - - - 0.0002877 53.0
BYD3_k127_6339207_2 H( )-stimulated, divalent metal cation uptake system - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001974 556.0
BYD3_k127_6339207_3 Sugar (and other) transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002021 513.0
BYD3_k127_6339207_4 Sulfatase-modifying factor enzyme 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004303 492.0
BYD3_k127_6339207_5 Alcohol dehydrogenase GroES-like domain K00008 - 1.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008472 441.0
BYD3_k127_6339207_6 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000056 419.0
BYD3_k127_6339207_7 oxidoreductase activity, acting on CH-OH group of donors - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007261 390.0
BYD3_k127_6339207_8 NIF3 (NGG1p interacting factor 3) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008578 373.0
BYD3_k127_6339207_9 ISXO2-like transposase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006415 349.0
BYD3_k127_6364227_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002398 588.0
BYD3_k127_6364227_1 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S K00311 - 1.5.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000264 594.0
BYD3_k127_6364227_10 Domain of unknown function (DUF374) K09778 - - 0.00000000000000000009906 93.0
BYD3_k127_6364227_2 Electron transfer flavoprotein FAD-binding domain K03522 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001618 343.0
BYD3_k127_6364227_3 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004084 325.0
BYD3_k127_6364227_4 malonyl CoA-acyl carrier protein transacylase K00645 - 2.3.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002705 318.0
BYD3_k127_6364227_5 Electron transfer flavoprotein domain K03521 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006961 282.0
BYD3_k127_6364227_6 reductase K00059 GO:0000166,GO:0003674,GO:0003824,GO:0004312,GO:0004316,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0016740,GO:0016746,GO:0016747,GO:0017144,GO:0018130,GO:0019752,GO:0030497,GO:0032787,GO:0034641,GO:0036094,GO:0042364,GO:0042802,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0048037,GO:0050661,GO:0050662,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:0072330,GO:0097159,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003188 275.0
BYD3_k127_6364227_7 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.00000000000000000000000000006028 117.0
BYD3_k127_6364227_8 Uncharacterized ACR, COG1399 K07040 - - 0.0000000000000000000000000006551 117.0
BYD3_k127_6364227_9 Ribosomal L32p protein family K02911 - - 0.00000000000000000003204 91.0
BYD3_k127_6372378_0 Protocatechuate 3,4-dioxygenase beta subunit N terminal K00449 - 1.13.11.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007756 307.0
BYD3_k127_6372378_1 Catalyzes the non-heme iron(II)-dependent oxidative cleavage of 2,3-dihydroxyphenylpropionic acid and 2,3- dihydroxicinnamic acid into 2-hydroxy-6-ketononadienedioate and 2- hydroxy-6-ketononatrienedioate, respectively K04099,K04101 - 1.13.11.57,1.13.11.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000213 302.0
BYD3_k127_6372378_2 Peptidase M16 inactive domain - - - 0.000000000000000000000000000000000000000000000000000000000000000001166 244.0
BYD3_k127_6372378_3 Carboxypeptidase regulatory-like domain - - - 0.00000000000000000000003466 117.0
BYD3_k127_6372378_4 Oxidoreductase family, NAD-binding Rossmann fold K10219 - 1.1.1.312 0.0000000000000003526 80.0
BYD3_k127_6428604_0 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002843 414.0
BYD3_k127_6428604_1 PFAM Peptidase M16 inactive domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002915 270.0
BYD3_k127_6428604_2 Dioxygenase K00448 - 1.13.11.3 0.000000000000000000000000000000000000000000000000000812 195.0
BYD3_k127_6428604_3 PFAM S23 ribosomal protein - - - 0.000000006079 64.0
BYD3_k127_650658_0 AMP-binding enzyme - - - 0.0 1055.0
BYD3_k127_650658_1 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K07303 - 1.3.99.16 1.487e-253 802.0
BYD3_k127_650658_10 (GMC) oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001302 422.0
BYD3_k127_650658_11 TonB-dependent Receptor Plug Domain K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001392 415.0
BYD3_k127_650658_12 PFAM Peptidase M11 gametolysin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004998 406.0
BYD3_k127_650658_13 O-Antigen ligase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002234 377.0
BYD3_k127_650658_14 undecaprenyl-phosphate glucose phosphotransferase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000425 376.0
BYD3_k127_650658_15 Dicarboxylate carrier MatC domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003091 368.0
BYD3_k127_650658_16 ADP-glyceromanno-heptose 6-epimerase activity K01710,K01784,K21211 - 4.2.1.46,5.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000801 353.0
BYD3_k127_650658_17 Glycosyltransferase Family 4 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001668 349.0
BYD3_k127_650658_18 polysaccharide deacetylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002833 351.0
BYD3_k127_650658_19 Transcriptional regulatory protein, C terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002396 345.0
BYD3_k127_650658_2 FAD linked oxidases, C-terminal domain - - - 1.743e-225 723.0
BYD3_k127_650658_20 Transcriptional regulatory protein, C terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003241 307.0
BYD3_k127_650658_21 PFAM Phytanoyl-CoA dioxygenase (PhyH) K10674 - 1.14.11.55 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003967 307.0
BYD3_k127_650658_22 Sulfotransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006256 304.0
BYD3_k127_650658_23 Sensor histidine kinase, HAMP domain-containing K07644 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007697 308.0
BYD3_k127_650658_24 polygalacturonase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000008011 310.0
BYD3_k127_650658_25 Belongs to the glycosyltransferase 26 family K05946 - 2.4.1.187 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002606 293.0
BYD3_k127_650658_26 Glycosyl transferase 4-like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006785 292.0
BYD3_k127_650658_27 Peptidoglycan-binding domain 1 protein K08305 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006825 282.0
BYD3_k127_650658_28 Nucleotidyl transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000009711 266.0
BYD3_k127_650658_29 Polysaccharide deacetylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001977 259.0
BYD3_k127_650658_3 PQQ-like domain K00117 - 1.1.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002622 619.0
BYD3_k127_650658_30 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002469 256.0
BYD3_k127_650658_31 response regulator K07713 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001205 255.0
BYD3_k127_650658_32 Sigma-54 interaction domain K06714 - - 0.0000000000000000000000000000000000000000000000000000000000000000000003298 252.0
BYD3_k127_650658_33 2Fe-2S -binding domain protein K07302 - 1.3.99.16 0.00000000000000000000000000000000000000000000000000000000000000000105 232.0
BYD3_k127_650658_34 Catalyzes the synthesis of activated sulfate K00860 - 2.7.1.25 0.000000000000000000000000000000000000000000000000000000000000004076 223.0
BYD3_k127_650658_35 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000008913 234.0
BYD3_k127_650658_36 eight transmembrane protein EpsH - - - 0.0000000000000000000000000000000000000000000000000000000001556 213.0
BYD3_k127_650658_37 thioesterase involved in non-ribosomal peptide biosynthesis K01071 - 3.1.2.21 0.00000000000000000000000000000000000000000000000000000001722 207.0
BYD3_k127_650658_38 3-beta hydroxysteroid dehydrogenase/isomerase family K15856 - 1.1.1.281 0.0000000000000000000000000000000000000000000000000001231 206.0
BYD3_k127_650658_39 COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon K00966,K05305,K16881 - 2.7.1.52,2.7.7.13,5.4.2.8 0.000000000000000000000000000000000000000000000000000255 200.0
BYD3_k127_650658_4 Acyl transferase domain in polyketide synthase (PKS) enzymes. K16127 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005371 592.0
BYD3_k127_650658_40 TonB-dependent Receptor Plug Domain K02014 - - 0.0000000000000000000000000000000000000000000003506 177.0
BYD3_k127_650658_41 Belongs to the P-Pant transferase superfamily K06133 - - 0.000000000000000000000000000000000000000000001784 173.0
BYD3_k127_650658_43 Sulfotransferase family - - - 0.000000000000000000000000000000000000000000005715 175.0
BYD3_k127_650658_44 FAD linked oxidases, C-terminal domain - - - 0.00000000000000000000000000000000000000001206 160.0
BYD3_k127_650658_45 - K02172 - - 0.00000000000000000000000000000000000000002261 164.0
BYD3_k127_650658_46 Chain length determinant protein - - - 0.00000000000000000000000000000000000000004307 171.0
BYD3_k127_650658_47 Polysaccharide biosynthesis/export protein K01991 - - 0.000000000000000000000000000000000002331 146.0
BYD3_k127_650658_48 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000007972 154.0
BYD3_k127_650658_49 Uncharacterised ArCR, COG2043 - - - 0.000000000000000000000000000000009129 137.0
BYD3_k127_650658_5 PQQ-like domain K00114 - 1.1.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008922 526.0
BYD3_k127_650658_50 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000001073 139.0
BYD3_k127_650658_51 - - - - 0.00000000000000000000000000000215 134.0
BYD3_k127_650658_52 protein methyltransferase activity - - - 0.0000000000000000000000000003519 125.0
BYD3_k127_650658_53 MbtH-like protein K05375 - - 0.00000000000000000000000001296 113.0
BYD3_k127_650658_54 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.0000000000000000000000000235 119.0
BYD3_k127_650658_55 PEP-CTERM motif - - - 0.00000000000000000000000002852 120.0
BYD3_k127_650658_56 Capsular exopolysaccharide family - - - 0.00000000000000000000000005442 121.0
BYD3_k127_650658_57 eight transmembrane protein EpsH - - - 0.000000000000000000007292 102.0
BYD3_k127_650658_58 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.00000000000000000003193 105.0
BYD3_k127_650658_59 gluconokinase activity - - - 0.0000000000000000009851 94.0
BYD3_k127_650658_6 Serine-pyruvate aminotransferase archaeal aspartate aminotransferase K00830 - 2.6.1.44,2.6.1.45,2.6.1.51 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008438 535.0
BYD3_k127_650658_60 - - - - 0.00000000000000007069 87.0
BYD3_k127_650658_62 Mycolic acid cyclopropane synthetase - - - 0.0000000002555 72.0
BYD3_k127_650658_63 SnoaL-like polyketide cyclase - - - 0.00000004274 61.0
BYD3_k127_650658_64 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K07712 - - 0.000002484 58.0
BYD3_k127_650658_7 Heparinase II/III N-terminus - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001019 503.0
BYD3_k127_650658_8 TIGRFAM asparagine synthase (glutamine-hydrolyzing) K01953 - 6.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004039 474.0
BYD3_k127_650658_9 Iron-regulated membrane protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007285 449.0
BYD3_k127_6513313_0 Low temperature requirement protein A - - - 0.00000000000000000000000000000000000000000000216 179.0
BYD3_k127_6513313_1 Transmembrane secretion effector - - - 0.00000000000001531 74.0
BYD3_k127_6513313_2 non supervised orthologous group - - - 0.0000008814 62.0
BYD3_k127_6515588_0 ribonucleoside-diphosphate reductase activity K00525 - 1.17.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003847 594.0
BYD3_k127_6515588_1 MacB-like periplasmic core domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000001466 265.0
BYD3_k127_6515588_2 Transcriptional regulator PadR-like family - - - 0.00000000000000000000000000000000000000000000000001008 185.0
BYD3_k127_6515796_0 Phosphate ABC transporter, periplasmic phosphate-binding protein K02040 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003363 389.0
BYD3_k127_6515796_1 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002322 362.0
BYD3_k127_6515796_2 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008491 357.0
BYD3_k127_6515796_3 Binding-protein-dependent transport system inner membrane component K02038 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001331 329.0
BYD3_k127_6515796_4 Protein of unknown function DUF47 K02039,K07220 GO:0000287,GO:0001558,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006873,GO:0006950,GO:0007154,GO:0008150,GO:0009266,GO:0009267,GO:0009268,GO:0009405,GO:0009408,GO:0009605,GO:0009628,GO:0009892,GO:0009987,GO:0009991,GO:0010468,GO:0010563,GO:0010605,GO:0010629,GO:0010966,GO:0016020,GO:0016036,GO:0019220,GO:0019222,GO:0019725,GO:0019897,GO:0019898,GO:0022898,GO:0030002,GO:0030145,GO:0030320,GO:0030643,GO:0031323,GO:0031324,GO:0031667,GO:0031668,GO:0031669,GO:0032409,GO:0032410,GO:0032412,GO:0032413,GO:0032879,GO:0033554,GO:0034605,GO:0034762,GO:0034763,GO:0034765,GO:0034766,GO:0040008,GO:0042221,GO:0042592,GO:0042594,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0043269,GO:0043271,GO:0044070,GO:0044092,GO:0044419,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0045936,GO:0046677,GO:0046872,GO:0046914,GO:0046983,GO:0048519,GO:0048523,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050896,GO:0051049,GO:0051051,GO:0051128,GO:0051174,GO:0051704,GO:0051716,GO:0055062,GO:0055081,GO:0055082,GO:0055083,GO:0060255,GO:0065007,GO:0065008,GO:0065009,GO:0070887,GO:0071214,GO:0071236,GO:0071467,GO:0071496,GO:0071944,GO:0072501,GO:0072502,GO:0072505,GO:0072506,GO:0098771,GO:0104004,GO:1903792,GO:1903795,GO:1903796,GO:1903959,GO:1903960,GO:2000185,GO:2000186 - 0.0000000000000000000000000000000000000000000000000000000000003073 222.0
BYD3_k127_6515796_5 PFAM response regulator receiver K02483,K07658,K07668 - - 0.0000000000000000000000000000000000000000000000000000002103 201.0
BYD3_k127_6520538_0 COGs COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase - - - 0.0000000000000000000000000000000000000000000004615 175.0
BYD3_k127_6520538_1 PFAM UspA domain protein - - - 0.000002418 57.0
BYD3_k127_6550245_0 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006918 529.0
BYD3_k127_6550245_1 PQQ-like domain K05889 - 1.1.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003453 515.0
BYD3_k127_6550245_10 DNA alkylation repair enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002182 249.0
BYD3_k127_6550245_11 transcriptional regulator K09017 - - 0.00000000000000000000000000000000000000000000000000000000000000000006333 237.0
BYD3_k127_6550245_12 phosphoprotein phosphatase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000005 232.0
BYD3_k127_6550245_13 alcohol dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000001623 222.0
BYD3_k127_6550245_14 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000001192 205.0
BYD3_k127_6550245_15 Putative ABC exporter - - - 0.0000000000000000000000000000000000000000000000000005768 209.0
BYD3_k127_6550245_16 methyltransferase - - - 0.00000000000000000000000000000000000000000000001786 177.0
BYD3_k127_6550245_17 COG COG0845 Membrane-fusion protein K01993 - - 0.00000000000000000000000000000000000000000009 183.0
BYD3_k127_6550245_19 Glyoxalase bleomycin resistance protein dioxygenase K04750 - - 0.00000000000000000000000000000000000000002225 158.0
BYD3_k127_6550245_2 AAA domain, putative AbiEii toxin, Type IV TA system K01990,K13926 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002886 434.0
BYD3_k127_6550245_20 involved in biosynthesis of extracellular polysaccharides - - - 0.0000000000000000000000000000000000001143 144.0
BYD3_k127_6550245_21 - K02172 - - 0.0000000000000000000000000000000000006117 157.0
BYD3_k127_6550245_22 transcriptional regulator PadR family - - - 0.00000000000000000000000000000000009088 135.0
BYD3_k127_6550245_23 Uncharacterized conserved protein (DUF2277) - - - 0.000000000000000000000000000000001063 131.0
BYD3_k127_6550245_24 acetyltransferase K00657 - 2.3.1.57 0.000000000000000000000000000006577 123.0
BYD3_k127_6550245_25 PFAM SMP-30 Gluconolaconase - - - 0.000000000000000003407 99.0
BYD3_k127_6550245_26 - - - - 0.00000005193 63.0
BYD3_k127_6550245_27 methyltransferase - - - 0.00000008366 57.0
BYD3_k127_6550245_28 Glyoxalase bleomycin resistance protein dioxygenase K04750 - - 0.000002355 56.0
BYD3_k127_6550245_29 methyltransferase activity - - - 0.00005188 48.0
BYD3_k127_6550245_3 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001975 439.0
BYD3_k127_6550245_4 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004522 388.0
BYD3_k127_6550245_5 PFAM amidohydrolase 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005979 387.0
BYD3_k127_6550245_6 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006602 369.0
BYD3_k127_6550245_7 ABC transporter K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000416 288.0
BYD3_k127_6550245_8 efflux transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001624 301.0
BYD3_k127_6550245_9 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 - 3.2.2.23,4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001587 282.0
BYD3_k127_6573134_0 IgA Peptidase M64 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000027 418.0
BYD3_k127_6573134_1 COG0457 FOG TPR repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006506 423.0
BYD3_k127_6585092_0 Tannase and feruloyl esterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003749 369.0
BYD3_k127_6585092_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001111 261.0
BYD3_k127_6585092_2 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000001402 153.0
BYD3_k127_6585092_3 - - - - 0.0000000000000000000000000002325 125.0
BYD3_k127_6585092_4 - - - - 0.0000008777 61.0
BYD3_k127_6652330_0 LVIVD repeat - - - 3.296e-222 696.0
BYD3_k127_6652330_1 Aldehyde dehydrogenase family K00140 - 1.2.1.18,1.2.1.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008982 365.0
BYD3_k127_6652330_2 cytochrome K17230 - - 0.00000000000000000000000000000000000000000000000000000000000001375 234.0
BYD3_k127_6652330_3 - - - - 0.0000000000000000000003504 108.0
BYD3_k127_6652330_4 cellulase activity K01183,K01728 - 3.2.1.14,4.2.2.2 0.00004114 55.0
BYD3_k127_6752252_0 Protein of unknown function (DUF3738) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006801 365.0
BYD3_k127_6752252_1 Domain of unknown function (DUF4159) - - - 0.00000000000000000000000000000000000000008813 164.0
BYD3_k127_6752252_2 uridine kinase K00876 - 2.7.1.48 0.000003884 52.0
BYD3_k127_675270_0 Monomeric isocitrate dehydrogenase K00031 - 1.1.1.42 0.0 1036.0
BYD3_k127_675270_1 Sodium:solute symporter family - - - 1.058e-195 625.0
BYD3_k127_675270_10 DinB family - - - 0.00000000000000000003707 105.0
BYD3_k127_675270_11 Lysin motif - - - 0.00000000000000000008156 98.0
BYD3_k127_675270_2 Peptidase, M16 K07263 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000104 546.0
BYD3_k127_675270_3 Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR) K01589 - 6.3.4.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005208 462.0
BYD3_k127_675270_4 Argininosuccinate lyase C-terminal K01755 - 4.3.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002437 422.0
BYD3_k127_675270_5 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated K00567,K10778 - 2.1.1.63 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001389 410.0
BYD3_k127_675270_6 Insulinase (Peptidase family M16) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003038 409.0
BYD3_k127_675270_7 PFAM Asparaginase K01424 - 3.5.1.1 0.00000000000000000000000000000000000000000000000000000000000000000008792 233.0
BYD3_k127_675270_8 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.0000000000000000000000000000000000000000000000000000000002153 213.0
BYD3_k127_675270_9 23S rRNA-intervening sequence protein - - - 0.00000000000000000000000009171 113.0
BYD3_k127_6791641_0 Orn/Lys/Arg decarboxylase, C-terminal domain K01584 - 4.1.1.19 0.0 1227.0
BYD3_k127_6791641_1 Catalyzes the sodium-dependent transport of glutamate - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002704 372.0
BYD3_k127_6791641_2 PFAM sigma-54 factor interaction domain-containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000945 365.0
BYD3_k127_6791641_3 Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000153 285.0
BYD3_k127_6791641_4 TRAP transporter solute receptor TAXI family - - - 0.0000000000000000000000000000000000000000000000000000000000000000001067 260.0
BYD3_k127_6791641_6 SpoIIAA-like - - - 0.00001654 53.0
BYD3_k127_6825696_0 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 1.291e-197 632.0
BYD3_k127_6825696_1 PFAM Alanine dehydrogenase PNT K00324 - 1.6.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003899 492.0
BYD3_k127_6825696_2 Putative neutral zinc metallopeptidase K07054 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002424 333.0
BYD3_k127_6825696_3 ATPase activity K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001334 270.0
BYD3_k127_6825696_4 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000007006 250.0
BYD3_k127_6825696_5 4TM region of pyridine nucleotide transhydrogenase, mitoch K00322,K00324 - 1.6.1.1,1.6.1.2 0.0000000000000000000000000000000000004446 143.0
BYD3_k127_6825696_6 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000007217 130.0
BYD3_k127_6825696_7 Sigma-70 region 2 K03088 - - 0.000001289 53.0
BYD3_k127_6834640_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 0.0 1110.0
BYD3_k127_6834640_1 TonB dependent receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003506 611.0
BYD3_k127_6834640_10 Barrel-sandwich domain of CusB or HlyD membrane-fusion - - - 0.00000000000000000000000000000000000000000000000000000000000138 227.0
BYD3_k127_6834640_11 PFAM blue (type 1) copper domain protein - - - 0.000000000000000000000000000000000000000000000000000000004295 207.0
BYD3_k127_6834640_12 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000006313 211.0
BYD3_k127_6834640_13 PFAM Methionine synthase, vitamin-B12 independent K00549 - 2.1.1.14 0.0000000000000000000000000000000000000000000000003243 190.0
BYD3_k127_6834640_15 Cytochrome C' - - - 0.000000000000000000000000000000008974 134.0
BYD3_k127_6834640_16 Cytochrome c7 and related cytochrome c - - - 0.00000000000000000000000000000007986 135.0
BYD3_k127_6834640_17 - - - - 0.00000000000000000000000000001108 123.0
BYD3_k127_6834640_18 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 0.0000000000000000000000000001668 119.0
BYD3_k127_6834640_19 - - - - 0.000000000000000000000003786 114.0
BYD3_k127_6834640_2 Molybdopterin oxidoreductase Fe4S4 domain K08357 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001039 495.0
BYD3_k127_6834640_20 Domain of unkown function (DUF1775) - - - 0.0000000000000000000008007 100.0
BYD3_k127_6834640_21 - - - - 0.00000000000000000003011 100.0
BYD3_k127_6834640_22 - - - - 0.000000000000001386 88.0
BYD3_k127_6834640_23 - - - - 0.00000000000003885 84.0
BYD3_k127_6834640_24 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000000000005248 78.0
BYD3_k127_6834640_25 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.00000004933 63.0
BYD3_k127_6834640_26 toxin-antitoxin pair type II binding - - - 0.00000006349 57.0
BYD3_k127_6834640_27 Cytochrome c K03611 - - 0.00000008388 60.0
BYD3_k127_6834640_28 Protein of unknown function (DUF3341) - - - 0.0000001011 60.0
BYD3_k127_6834640_29 Cytochrome c oxidase subunit K02275 - 1.9.3.1 0.000000213 53.0
BYD3_k127_6834640_3 Polysulphide reductase, NrfD K00185 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002126 435.0
BYD3_k127_6834640_30 YtkA-like - - - 0.000002003 55.0
BYD3_k127_6834640_31 YHS domain - - - 0.000002491 55.0
BYD3_k127_6834640_32 AcrB/AcrD/AcrF family K07787 - - 0.000004679 56.0
BYD3_k127_6834640_4 NmrA-like family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002259 377.0
BYD3_k127_6834640_5 TIGRFAM 40-residue YVTN family beta-propeller repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000109 368.0
BYD3_k127_6834640_6 4Fe-4S dicluster domain K00184 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000027 320.0
BYD3_k127_6834640_7 PFAM Beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003588 312.0
BYD3_k127_6834640_8 Calcineurin-like phosphoesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003099 298.0
BYD3_k127_6834640_9 Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress - - - 0.0000000000000000000000000000000000000000000000000000000000004365 214.0
BYD3_k127_684901_0 DNA topological change K03168 - 5.99.1.2 2.378e-241 770.0
BYD3_k127_684901_1 Xylose isomerase domain protein TIM barrel - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004033 510.0
BYD3_k127_684901_2 oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001414 279.0
BYD3_k127_684901_3 Protein of unknown function (DUF1552) - - - 0.000000000000000000000000000000000000000000000000000000000000000006041 234.0
BYD3_k127_684901_4 Ankyrin repeats (many copies) - - - 0.00000000000000000000000000000000000000000000000000000000385 224.0
BYD3_k127_684901_5 Cobalamin-independent synthase, Catalytic domain K00549 - 2.1.1.14 0.0000000000000000000000000000000000003873 143.0
BYD3_k127_6880065_0 AcrB/AcrD/AcrF family K03296 - - 0.0 1113.0
BYD3_k127_6880065_1 metallocarboxypeptidase activity K14054 - - 1.117e-293 925.0
BYD3_k127_6880065_10 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000009202 303.0
BYD3_k127_6880065_11 PFAM response regulator receiver - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000137 304.0
BYD3_k127_6880065_12 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001628 301.0
BYD3_k127_6880065_13 Outer membrane efflux protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000673 308.0
BYD3_k127_6880065_14 Belongs to the peptidase M48B family K03799 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000009408 298.0
BYD3_k127_6880065_15 Biotin-lipoyl like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001916 299.0
BYD3_k127_6880065_16 peptidoglycan-binding protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005501 287.0
BYD3_k127_6880065_17 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 0.0000000000000000000000000000000000000000000000000000000000000008852 242.0
BYD3_k127_6880065_18 COG2897 Rhodanese-related sulfurtransferase K01011 - 2.8.1.1,2.8.1.2 0.00000000000000000000000000000000000000000000000000000000002462 227.0
BYD3_k127_6880065_19 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.0000000000000000000000000000000000000000000000000000000001329 220.0
BYD3_k127_6880065_2 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 5.184e-211 679.0
BYD3_k127_6880065_20 Carboxypeptidase regulatory-like domain - - - 0.00000000000000000000000000000000000000000000000000000008486 214.0
BYD3_k127_6880065_21 Peptidase family M23 K21472 - - 0.00000000000000000000000000000000000000000000000000001369 199.0
BYD3_k127_6880065_22 HDOD domain K03088 - - 0.000000000000000000000000000000000000000000000000004495 187.0
BYD3_k127_6880065_23 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000002583 188.0
BYD3_k127_6880065_24 Transcriptional regulator PadR-like family - - - 0.000000000000000000000000000000000000000003916 158.0
BYD3_k127_6880065_25 RDD family - - - 0.00000000000000000000000000000000000000007061 173.0
BYD3_k127_6880065_26 alpha-L-arabinofuranosidase - - - 0.0000000000000000000000000002832 127.0
BYD3_k127_6880065_27 Chromate transporter K07240 - - 0.0000000000000000000000000003351 118.0
BYD3_k127_6880065_28 - - - - 0.0000000000000000000000000004002 122.0
BYD3_k127_6880065_29 Peptidase M56, BlaR1 - - - 0.000000000000000000000005505 113.0
BYD3_k127_6880065_3 MatE - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004554 572.0
BYD3_k127_6880065_30 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.00000000000003456 86.0
BYD3_k127_6880065_31 Putative zinc- or iron-chelating domain K18475 - - 0.000000001327 72.0
BYD3_k127_6880065_4 PFAM LOR SDH bifunctional enzyme conserved region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004033 470.0
BYD3_k127_6880065_5 efflux transmembrane transporter activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001905 431.0
BYD3_k127_6880065_6 PFAM Fatty acid desaturase K00507 - 1.14.19.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004062 401.0
BYD3_k127_6880065_7 aminotransferase class I and II - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004795 358.0
BYD3_k127_6880065_8 Peptide methionine sulfoxide reductase K07304 - 1.8.4.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008403 343.0
BYD3_k127_6880065_9 Endonuclease/Exonuclease/phosphatase family K01142 - 3.1.11.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002457 334.0
BYD3_k127_690192_0 Domain of unknown function (DUF1998) K06877 GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006807,GO:0008026,GO:0008150,GO:0008152,GO:0008186,GO:0009987,GO:0010501,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070035,GO:0071704,GO:0090304,GO:0140098,GO:1901360 - 3.147e-266 854.0
BYD3_k127_690192_1 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 6.571e-221 697.0
BYD3_k127_690192_10 Nodulation protein S (NodS) - - - 0.000000000000000000000000000000000000691 160.0
BYD3_k127_690192_11 Binds the 23S rRNA K02909 - - 0.00000000000000000000000000165 115.0
BYD3_k127_690192_12 Pfam:DUF2029 - - - 0.000000319 62.0
BYD3_k127_690192_2 PFAM Alcohol dehydrogenase GroES-like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002934 597.0
BYD3_k127_690192_3 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007298 466.0
BYD3_k127_690192_4 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006466 351.0
BYD3_k127_690192_5 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004595 262.0
BYD3_k127_690192_6 Polyketide cyclase / dehydrase and lipid transport - - - 0.000000000000000000000000000000000000000000000000000000000000000007947 234.0
BYD3_k127_690192_7 phosphatidylinositol metabolic process - - - 0.00000000000000000000000000000000000000000000000000000001586 215.0
BYD3_k127_690192_8 Exonuclease K07502 - - 0.0000000000000000000000000000000000000000000000000002561 206.0
BYD3_k127_690192_9 Necessary for normal cell division and for the maintenance of normal septation K03978 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000000000000002613 151.0
BYD3_k127_6917742_0 methyltransferase activity K21310 - 2.1.1.334 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000103 332.0
BYD3_k127_6917742_1 Peptidase family M23 K21472 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001498 336.0
BYD3_k127_6917742_10 positive regulation of growth rate - GO:0003674,GO:0005488,GO:0008150,GO:0010035,GO:0010038,GO:0030955,GO:0031420,GO:0035864,GO:0042221,GO:0043167,GO:0043169,GO:0046872,GO:0050896 - 0.000000000000000000000000002003 115.0
BYD3_k127_6917742_11 Psort location CytoplasmicMembrane, score K09790 - - 0.0000000000000008049 83.0
BYD3_k127_6917742_12 Metallo-beta-lactamase superfamily K01069 - 3.1.2.6 0.000000000000001942 90.0
BYD3_k127_6917742_13 aminopeptidase N - - - 0.00000000007463 72.0
BYD3_k127_6917742_14 Metallo-beta-lactamase superfamily - - - 0.0000003972 54.0
BYD3_k127_6917742_2 adenylyl cyclase class-3 4 guanylyl cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001214 287.0
BYD3_k127_6917742_3 PFAM sigma-54 factor interaction domain-containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000007203 265.0
BYD3_k127_6917742_4 phosphoprotein phosphatase activity K14680 - 6.5.1.3 0.00000000000000000000000000000000000000000000000000000000000006314 225.0
BYD3_k127_6917742_5 Aldo/keto reductase family - - - 0.0000000000000000000000000000000000000000000000000000000002707 210.0
BYD3_k127_6917742_6 Putative restriction endonuclease - - - 0.000000000000000000000000000000000000000000000000000000001462 210.0
BYD3_k127_6917742_7 Rhodanese-like domain K01069 - 3.1.2.6 0.00000000000000000000000000000000000000000000000000017 191.0
BYD3_k127_6917742_8 Involved in the tonB-independent uptake of proteins - - - 0.00000000000000000000000000002023 123.0
BYD3_k127_6917742_9 Rhodanese-like domain K01069 - 3.1.2.6 0.00000000000000000000000000004413 121.0
BYD3_k127_6919595_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 8.18e-308 967.0
BYD3_k127_6919595_1 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 4.085e-248 794.0
BYD3_k127_6919595_10 Ribosomal protein S20 K02968 - - 0.000000000000005557 78.0
BYD3_k127_6919595_11 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000001544 79.0
BYD3_k127_6919595_12 - - - - 0.000000000008257 76.0
BYD3_k127_6919595_13 - - - - 0.0000000007029 71.0
BYD3_k127_6919595_14 RecX family K03565 - - 0.000000001939 64.0
BYD3_k127_6919595_2 MacB-like periplasmic core domain - - - 9.313e-223 722.0
BYD3_k127_6919595_3 Histone deacetylase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003848 293.0
BYD3_k127_6919595_4 COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL CutL homologs - - - 0.000000000000000000000000000000000000000000000000000000000001539 221.0
BYD3_k127_6919595_5 PepSY-associated TM region - - - 0.0000000000000000000000000000000000000000003382 171.0
BYD3_k127_6919595_6 PFAM Transglycosylase SLT domain K08309 - - 0.00000000000000000000000000000000000009348 151.0
BYD3_k127_6919595_7 Transcriptional regulator PadR-like family - - - 0.00000000000000000000000000000000001881 138.0
BYD3_k127_6919595_8 Lipopolysaccharide-assembly - - - 0.000000000000000000003323 100.0
BYD3_k127_6919595_9 TIGRFAM DNA polymerase III, delta subunit K02340 - 2.7.7.7 0.0000000000000000003627 100.0
BYD3_k127_69227_0 DNA topological change K03168 - 5.99.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001853 537.0
BYD3_k127_6928063_0 DNA topological change K03168 - 5.99.1.2 4.585e-207 669.0
BYD3_k127_6928063_1 Protein of unknown function (DUF1552) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002996 471.0
BYD3_k127_6928063_2 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K20974 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001003 468.0
BYD3_k127_6928063_3 phosphorelay signal transduction system K01338 - 3.4.21.53 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001102 447.0
BYD3_k127_6928063_4 - - - - 0.000000000000000000000000000000000000000000000000000007845 203.0
BYD3_k127_6928063_5 ankyrin repeat K15503 - - 0.00000000000000000004347 92.0
BYD3_k127_6953491_0 Protein tyrosine kinase K08282,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001375 606.0
BYD3_k127_6953491_1 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007346 604.0
BYD3_k127_6953491_2 DNA topological change - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001788 546.0
BYD3_k127_6953491_3 G8 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003768 533.0
BYD3_k127_6953491_4 Protein of unknown function (DUF1552) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002571 357.0
BYD3_k127_6953491_5 ankyrin repeat K15503 - - 0.0000000000000000000000000000000000000000000000000000003827 213.0
BYD3_k127_6953491_6 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000004609 154.0
BYD3_k127_6953491_7 CAAX amino terminal protease family - - - 0.0000000000004235 76.0
BYD3_k127_6953491_8 WD40 domain protein beta Propeller K08884,K12132 - 2.7.11.1 0.00008235 46.0
BYD3_k127_6963974_0 Transketolase, pyrimidine binding domain K00615 - 2.2.1.1 2.213e-247 777.0
BYD3_k127_6963974_1 potassium ion transmembrane transporter activity K03549 GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0008150,GO:0008324,GO:0009987,GO:0015075,GO:0015077,GO:0015079,GO:0015318,GO:0015672,GO:0016020,GO:0022857,GO:0022890,GO:0030001,GO:0034220,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0071804,GO:0071805,GO:0098655,GO:0098660,GO:0098662 - 5.089e-213 678.0
BYD3_k127_6963974_10 - K02172 - - 0.00000000000000000000000000000000000001071 161.0
BYD3_k127_6963974_11 DinB superfamily - - - 0.0000000000000000000000000000008183 128.0
BYD3_k127_6963974_12 Belongs to the GPAT DAPAT family K00631 - 2.3.1.15 0.000000000000000000000000002468 125.0
BYD3_k127_6963974_13 TIGRFAM TRAP transporter, 4TM 12TM fusion protein - - - 0.00000000000000000000905 99.0
BYD3_k127_6963974_14 serine-type D-Ala-D-Ala carboxypeptidase activity K07259 - 3.4.16.4 0.0000000000000000006937 97.0
BYD3_k127_6963974_15 S23 ribosomal protein - - - 0.00000000000001265 78.0
BYD3_k127_6963974_16 cell redox homeostasis - - - 0.000000000001253 78.0
BYD3_k127_6963974_17 Transposase - - - 0.0000000006944 61.0
BYD3_k127_6963974_18 Domain of unknown function (DUF4149) - - - 0.000000001889 65.0
BYD3_k127_6963974_19 cell redox homeostasis - - - 0.0000000366 63.0
BYD3_k127_6963974_2 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002123 480.0
BYD3_k127_6963974_20 transposase activity K07483 - - 0.000003172 49.0
BYD3_k127_6963974_3 Isocitrate/isopropylmalate dehydrogenase K00030 - 1.1.1.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000355 428.0
BYD3_k127_6963974_4 Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. Also shows phosphatase, 2'- nucleotidase and 2',3'-cyclic phosphodiesterase activities. These phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases K00974 - 2.7.7.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009247 362.0
BYD3_k127_6963974_5 Protein of unknown function DUF72 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002823 291.0
BYD3_k127_6963974_6 TIGRFAM TRAP transporter solute receptor, TAXI family K07080 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000057 296.0
BYD3_k127_6963974_7 Proline dehydrogenase K00318 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001515 287.0
BYD3_k127_6963974_8 Threonine dehydratase K01754 - 4.3.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000004031 266.0
BYD3_k127_6963974_9 glycogen debranching enzyme GlgX K01214 - 3.2.1.68 0.000000000000000000000000000000000000005845 149.0
BYD3_k127_696758_0 DEAD-like helicases superfamily K11927 - 3.6.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007319 361.0
BYD3_k127_696758_1 Peptidase M56, BlaR1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005001 372.0
BYD3_k127_696758_10 PFAM RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) - - - 0.000000000000000000000001268 106.0
BYD3_k127_696758_2 FtsX-like permease family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003513 325.0
BYD3_k127_696758_3 Acyl-CoA thioester hydrolase bile acid-CoA amino acid N-acetyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000008813 253.0
BYD3_k127_696758_4 Protein of unknown function (DUF3179) - - - 0.000000000000000000000000000000000000000000004575 176.0
BYD3_k127_696758_5 negative regulation of transcription, DNA-templated - - - 0.0000000000000000000000000000000000000002376 153.0
BYD3_k127_696758_6 Sigma-70, region 4 K03088 - - 0.000000000000000000000000000000000000002671 152.0
BYD3_k127_696758_7 efflux transmembrane transporter activity - - - 0.000000000000000000000000000000002202 139.0
BYD3_k127_696758_8 Transcriptional regulatory protein, C terminal - - - 0.000000000000000000000000000001192 127.0
BYD3_k127_696758_9 - K02172 - - 0.000000000000000000000000000007902 130.0
BYD3_k127_6988007_0 Pantothenic acid kinase K00867 GO:0003674,GO:0003824,GO:0004594,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.1.33 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001444 422.0
BYD3_k127_6988007_1 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001953 374.0
BYD3_k127_6988007_10 - - - - 0.0000000000000000000000000000000000000000000001856 177.0
BYD3_k127_6988007_11 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 - 3.6.1.66 0.00000000000000000000000000000000000000000003627 168.0
BYD3_k127_6988007_12 Haem-degrading - - - 0.000000000000000000000000000000000000009434 156.0
BYD3_k127_6988007_13 - K02172 - - 0.000000000000000000000000000000000004193 149.0
BYD3_k127_6988007_14 - K02172 - - 0.000000000000000000000000000000000009341 149.0
BYD3_k127_6988007_15 - - - - 0.0000000000000000000000000000002263 138.0
BYD3_k127_6988007_16 Cell wall hydrolase autolysin K01448 - 3.5.1.28 0.0000000000000000000000000000004835 139.0
BYD3_k127_6988007_17 - - - - 0.00000000000000000000000000001374 128.0
BYD3_k127_6988007_18 - K02172 - - 0.0000000000000000000000000001757 125.0
BYD3_k127_6988007_19 Transcriptional regulator PadR-like family - - - 0.00000000000000000000000001799 112.0
BYD3_k127_6988007_2 PFAM band 7 protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006032 343.0
BYD3_k127_6988007_20 PFAM Bacterial regulatory proteins, gntR family K07979 - - 0.0000000000000000000007621 99.0
BYD3_k127_6988007_21 CAAX protease self-immunity - - - 0.000000000000000008174 94.0
BYD3_k127_6988007_22 Protein of unknown function (DUF3738) - - - 0.0000000000000009189 88.0
BYD3_k127_6988007_23 Protein of Unknown function (DUF2784) - - - 0.000000000000006979 80.0
BYD3_k127_6988007_24 Sporulation and spore germination - - - 0.00000000000001654 87.0
BYD3_k127_6988007_25 Methyltransferase domain - - - 0.00000000000003249 83.0
BYD3_k127_6988007_26 Integrase core domain K07497 - - 0.0000000000002091 73.0
BYD3_k127_6988007_27 - K02172 - - 0.0000000000004947 76.0
BYD3_k127_6988007_28 Protein of unknown function (DUF3738) - - - 0.0000000000009018 70.0
BYD3_k127_6988007_29 - K02172 - - 0.00000000004264 67.0
BYD3_k127_6988007_3 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 GO:0003674,GO:0003824,GO:0004518,GO:0004540,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006401,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016075,GO:0016787,GO:0016788,GO:0019439,GO:0022613,GO:0031123,GO:0031125,GO:0034470,GO:0034641,GO:0034655,GO:0034660,GO:0034661,GO:0042254,GO:0043170,GO:0043628,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0140098,GO:1901360,GO:1901361,GO:1901575 2.7.7.56 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008748 322.0
BYD3_k127_6988007_30 - - - - 0.000003395 59.0
BYD3_k127_6988007_31 - - - - 0.0001019 51.0
BYD3_k127_6988007_4 Sulfite exporter TauE/SafE K07090 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000846 282.0
BYD3_k127_6988007_5 Histidine kinase K07683 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001483 297.0
BYD3_k127_6988007_6 Nodulation protein S (NodS) - - - 0.0000000000000000000000000000000000000000000000000000000000000005265 228.0
BYD3_k127_6988007_7 TonB-dependent receptor - - - 0.000000000000000000000000000000000000000000000000000000000407 231.0
BYD3_k127_6988007_8 peptidase - - - 0.0000000000000000000000000000000000000000000000302 185.0
BYD3_k127_6988007_9 MEDS: MEthanogen/methylotroph, DcmR Sensory domain - - - 0.00000000000000000000000000000000000000000000009761 181.0
BYD3_k127_6994470_0 Belongs to the glycosyl hydrolase 67 family K01235 - 3.2.1.139 1.01e-314 988.0
BYD3_k127_6994470_1 mandelate racemase muconate lactonizing K01684,K01781,K08323 - 4.2.1.6,4.2.1.8,5.1.2.2 2.755e-194 614.0
BYD3_k127_6994470_10 WD40-like Beta Propeller Repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000892 416.0
BYD3_k127_6994470_11 FGGY family of carbohydrate kinases, C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001691 419.0
BYD3_k127_6994470_12 DNA helicase K03654 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001339 411.0
BYD3_k127_6994470_13 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004585 396.0
BYD3_k127_6994470_14 DNA ligase K01971 - 6.5.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001201 365.0
BYD3_k127_6994470_15 Pfam pfkB family carbohydrate kinase K00874 - 2.7.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002157 371.0
BYD3_k127_6994470_16 PFAM CorA-like Mg2 transporter protein K03284 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004017 365.0
BYD3_k127_6994470_17 Methylase involved in ubiquinone menaquinone biosynthesis - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000113 362.0
BYD3_k127_6994470_18 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002259 372.0
BYD3_k127_6994470_19 KR domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009427 317.0
BYD3_k127_6994470_2 PFAM Xylose isomerase domain protein TIM barrel K01805 - 5.3.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006881 571.0
BYD3_k127_6994470_20 oxidoreductase activity K00274 - 1.4.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002138 296.0
BYD3_k127_6994470_21 Tetratricopeptide repeats K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001434 300.0
BYD3_k127_6994470_22 Beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001491 287.0
BYD3_k127_6994470_23 dna ligase K01971 - 6.5.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008552 273.0
BYD3_k127_6994470_24 N-acetylglucosaminylinositol deacetylase activity K22135 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002491 282.0
BYD3_k127_6994470_25 YjgF/chorismate_mutase-like, putative endoribonuclease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002268 254.0
BYD3_k127_6994470_26 Belongs to the peptidase S8 family K17734 - - 0.0000000000000000000000000000000000000000000000000000000000000000001488 253.0
BYD3_k127_6994470_27 PFAM alpha beta hydrolase fold - - - 0.000000000000000000000000000000000000000000000000000000000005557 222.0
BYD3_k127_6994470_28 2-dehydro-3-deoxy-phosphogluconate aldolase activity K01625 - 4.1.2.14,4.1.3.42 0.00000000000000000000000000000000000000000000000000000000002838 214.0
BYD3_k127_6994470_29 DinB superfamily - - - 0.00000000000000000000000000000000000000000000000000000007405 201.0
BYD3_k127_6994470_3 COG0076 Glutamate decarboxylase and related PLP-dependent K01593 - 4.1.1.105,4.1.1.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001974 576.0
BYD3_k127_6994470_30 Bacterial transcriptional repressor C-terminal - - - 0.0000000000000000000000000000000000000000000000000003847 192.0
BYD3_k127_6994470_31 CotH kinase protein - - - 0.000000000000000000000000000000000000000000000000004829 199.0
BYD3_k127_6994470_32 - - - - 0.00000000000000000000000000000000000000000000000009273 184.0
BYD3_k127_6994470_33 Involved in the isomerization of 5-deoxy-glucuronate (5DG) to 5-dehydro-2-deoxy-D-gluconate (DKG or 2-deoxy-5-keto-D- gluconate) K03337 - 5.3.1.30 0.0000000000000000000000000000000000000000000137 171.0
BYD3_k127_6994470_34 - K02172 - - 0.0000000000000000000000000000000000000000001548 170.0
BYD3_k127_6994470_35 - K02172 - - 0.000000000000000000000000000000000000000000981 167.0
BYD3_k127_6994470_36 Peptidoglycan-binding domain 1 protein K01448 - 3.5.1.28 0.0000000000000000000000000000000000000001796 169.0
BYD3_k127_6994470_37 - - - - 0.00000000000000000000000000000000000002004 150.0
BYD3_k127_6994470_38 Transcriptional regulatory protein, C terminal - - - 0.000000000000000000000000000000000000186 157.0
BYD3_k127_6994470_39 Protein of unknown function (DUF3738) - - - 0.000000000000000000000000000000000001926 150.0
BYD3_k127_6994470_4 PFAM Major Facilitator Superfamily K08191 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009117 521.0
BYD3_k127_6994470_40 Cellulase N-terminal ig-like domain K01179 - 3.2.1.4 0.00000000000000000000000000000004361 145.0
BYD3_k127_6994470_41 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000008859 135.0
BYD3_k127_6994470_42 Putative diguanylate phosphodiesterase - - - 0.0000000000000000000000000004317 128.0
BYD3_k127_6994470_43 von Willebrand factor, type A K07114 - - 0.00000000000000000000000001096 121.0
BYD3_k127_6994470_44 - - - - 0.0000000000000000000000003688 119.0
BYD3_k127_6994470_45 COG1228 Imidazolonepropionase and related amidohydrolases - - - 0.00000000000000000000007361 112.0
BYD3_k127_6994470_46 - - - - 0.000000000000000000000549 110.0
BYD3_k127_6994470_47 - - - - 0.0000000000000000001365 100.0
BYD3_k127_6994470_48 Xylose isomerase-like TIM barrel - - - 0.0000000000000000004345 102.0
BYD3_k127_6994470_49 peptidyl-tyrosine sulfation - - - 0.000000000000002977 90.0
BYD3_k127_6994470_5 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004485 541.0
BYD3_k127_6994470_50 Involved in the tonB-independent uptake of proteins - - - 0.0000000000005395 81.0
BYD3_k127_6994470_51 - - - - 0.000000000001588 73.0
BYD3_k127_6994470_52 glyoxalase III activity K00799 - 2.5.1.18 0.00000000006658 69.0
BYD3_k127_6994470_53 von Willebrand factor, type A K07114 - - 0.0000000001985 68.0
BYD3_k127_6994470_54 Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes - - - 0.000000002628 71.0
BYD3_k127_6994470_55 membrane K11622 - - 0.000000006733 67.0
BYD3_k127_6994470_56 - - - - 0.00000001923 62.0
BYD3_k127_6994470_58 type III restriction protein res subunit K01153 - 3.1.21.3 0.0000007509 53.0
BYD3_k127_6994470_59 - - - - 0.00002807 59.0
BYD3_k127_6994470_6 Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls K01439 - 3.5.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002696 485.0
BYD3_k127_6994470_60 lactoylglutathione lyase activity - - - 0.0001288 50.0
BYD3_k127_6994470_61 Matrixin - - - 0.0002116 55.0
BYD3_k127_6994470_62 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K03307 - - 0.0004981 44.0
BYD3_k127_6994470_7 Homoserine dehydrogenase, NAD binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002597 464.0
BYD3_k127_6994470_8 Belongs to the transferase hexapeptide repeat family K00674 - 2.3.1.117 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000945 432.0
BYD3_k127_6994470_9 Glycosyl hydrolases family 8 K00694 - 2.4.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006239 434.0
BYD3_k127_70357_0 Transporter associated domain K03699 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004753 473.0
BYD3_k127_70357_1 dihydrolipoamide dehydrogenase K00382 - 1.8.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003456 462.0
BYD3_k127_70357_10 dithiol-disulfide isomerase involved in polyketide biosynthesis - - - 0.000000000000000000000000000000000000000000000000000000000000000003337 231.0
BYD3_k127_70357_11 KR domain - - - 0.000000000000000000000000000000000000000000000000000000000000000007069 232.0
BYD3_k127_70357_12 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03644,K03801 GO:0003674,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009249,GO:0009987,GO:0010467,GO:0016740,GO:0016746,GO:0016747,GO:0018065,GO:0018193,GO:0018205,GO:0019538,GO:0033819,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0051604,GO:0071704,GO:1901564 2.3.1.181,2.8.1.8 0.00000000000000000000000000000000000000000000000000000000000000003051 231.0
BYD3_k127_70357_13 COG0491 Zn-dependent hydrolases, including glyoxylases K01069 - 3.1.2.6 0.00000000000000000000000000000000000000000000000000001168 198.0
BYD3_k127_70357_14 Glyoxalase-like domain - - - 0.0000000000000000000000000000000000000000000000003952 182.0
BYD3_k127_70357_15 radical SAM - - - 0.000000000000000000000000000000000000000000006361 182.0
BYD3_k127_70357_16 serine threonine protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000006698 148.0
BYD3_k127_70357_17 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000001198 132.0
BYD3_k127_70357_18 - - - - 0.00000000000000000000000000026 115.0
BYD3_k127_70357_19 - - - - 0.00000000000000000000004105 103.0
BYD3_k127_70357_2 e3 binding domain K00658 - 2.3.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003072 421.0
BYD3_k127_70357_20 Signal peptide protein - GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0030312,GO:0044424,GO:0044444,GO:0044464,GO:0071944,GO:0097159,GO:1901363 - 0.000000000006638 69.0
BYD3_k127_70357_21 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 0.0000000000181 74.0
BYD3_k127_70357_22 Protein of unknown function (DUF3738) K02172 - - 0.0000000004633 66.0
BYD3_k127_70357_3 response regulator K02481,K07715 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002614 389.0
BYD3_k127_70357_4 Transporter associated domain K03699 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000237 383.0
BYD3_k127_70357_5 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000846 355.0
BYD3_k127_70357_6 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009072 351.0
BYD3_k127_70357_7 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001189 355.0
BYD3_k127_70357_8 PA domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000177 319.0
BYD3_k127_70357_9 Transketolase, pyrimidine binding domain K00167 - 1.2.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008058 292.0
BYD3_k127_7041594_0 Bacterial periplasmic substrate-binding proteins K02029,K02030 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000126 550.0
BYD3_k127_7041594_1 DNA polymerase LigD polymerase domain K01971 - 6.5.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000147 452.0
BYD3_k127_7041594_10 Pyridine nucleotide-disulphide oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001204 304.0
BYD3_k127_7041594_11 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009523 293.0
BYD3_k127_7041594_12 - - - - 0.0000000000000000000000000000000000000000000000000000000183 206.0
BYD3_k127_7041594_13 PFAM GCN5-related N-acetyltransferase - - - 0.000000000000000000000000000000000000000000000000000001083 196.0
BYD3_k127_7041594_14 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000001952 192.0
BYD3_k127_7041594_15 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.0000000000000000000000000000000000000000000000000003257 199.0
BYD3_k127_7041594_16 PFAM ABC transporter related K02028 - 3.6.3.21 0.0000000000000000000000000000000000000000000000000004107 194.0
BYD3_k127_7041594_17 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 - 3.1.22.4 0.00000000000000000000000000000000000000000000008516 177.0
BYD3_k127_7041594_18 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 GO:0000166,GO:0003674,GO:0003824,GO:0004175,GO:0004176,GO:0004222,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006508,GO:0006807,GO:0006950,GO:0006979,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0008270,GO:0009056,GO:0009057,GO:0010468,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019222,GO:0019538,GO:0030145,GO:0030163,GO:0030554,GO:0031224,GO:0031226,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0035639,GO:0036094,GO:0040007,GO:0042623,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043273,GO:0044238,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0046872,GO:0046914,GO:0050789,GO:0050896,GO:0060255,GO:0065007,GO:0070011,GO:0071704,GO:0071944,GO:0097159,GO:0097367,GO:0098796,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575 - 0.00000000000000000000000000000000000000000001398 168.0
BYD3_k127_7041594_19 dehydrogenase - - - 0.00000000000000000000000000000000000000001452 164.0
BYD3_k127_7041594_2 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002669 455.0
BYD3_k127_7041594_20 Domain of unknown function (DUF4112) - - - 0.00000000000000000000000000000001359 132.0
BYD3_k127_7041594_21 Methyltransferase domain - - - 0.00000000000000000006989 99.0
BYD3_k127_7041594_22 methyltransferase K15467 - 2.1.1.315 0.00000000000002734 83.0
BYD3_k127_7041594_24 Unextendable partial coding region - - - 0.00006128 51.0
BYD3_k127_7041594_3 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001836 439.0
BYD3_k127_7041594_4 Belongs to the FPG family K10563 - 3.2.2.23,4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005489 412.0
BYD3_k127_7041594_5 AI-2E family transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005984 357.0
BYD3_k127_7041594_6 FAD binding domain K00103 - 1.1.3.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004659 347.0
BYD3_k127_7041594_7 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008808 346.0
BYD3_k127_7041594_8 peptidyl-lysine modification to peptidyl-hypusine - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007192 334.0
BYD3_k127_7041594_9 transcriptional regulatory protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005338 326.0
BYD3_k127_705089_0 Catalyzes the reversible hydration of fumarate to (S)- malate K01676 - 4.2.1.2 1.142e-217 709.0
BYD3_k127_705089_1 Fumarase C C-terminus K01744 - 4.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004912 488.0
BYD3_k127_705089_10 Probable molybdopterin binding domain K07141 - 2.7.7.76 0.000000000000000000000000002895 119.0
BYD3_k127_705089_11 Belongs to the Fur family K03711 - - 0.000000000000000000000002648 115.0
BYD3_k127_705089_12 - - - - 0.0000000000000000002294 96.0
BYD3_k127_705089_13 abc transporter K01995 - - 0.000000000000009663 84.0
BYD3_k127_705089_14 Cold-Shock Protein K03704 - - 0.00000000008665 66.0
BYD3_k127_705089_15 Cold shock protein domain K03704 - - 0.000000002048 66.0
BYD3_k127_705089_16 Amidohydrolase family - - - 0.00002164 49.0
BYD3_k127_705089_17 Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin K03636 - - 0.0001175 47.0
BYD3_k127_705089_2 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002724 395.0
BYD3_k127_705089_3 Phosphomethylpyrimidine kinase K00868,K00941,K03147,K21219 GO:0008150,GO:0040007 2.5.1.3,2.7.1.35,2.7.1.49,2.7.4.7,4.1.99.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004714 280.0
BYD3_k127_705089_4 DNA polymerase alpha chain like domain K07053 - 3.1.3.97 0.000000000000000000000000000000000000000000000000000000000001361 222.0
BYD3_k127_705089_5 - - - - 0.000000000000000000000000000000000000000000000000006771 194.0
BYD3_k127_705089_6 Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin K21142 - 2.8.1.12 0.00000000000000000000000000000000001359 140.0
BYD3_k127_705089_7 BioY family K03523 - - 0.00000000000000000000000000000000003152 143.0
BYD3_k127_705089_8 Belongs to the HesB IscA family K15724 - - 0.00000000000000000000000000000002152 129.0
BYD3_k127_705089_9 Methyltransferase domain - - - 0.00000000000000000000000000000005625 133.0
BYD3_k127_7113910_0 2-oxoglutarate dehydrogenase N-terminus K00164 - 1.2.4.2 0.0 1052.0
BYD3_k127_7113910_1 Aldehyde dehydrogenase family K00294 - 1.2.1.88 1.454e-236 742.0
BYD3_k127_7113910_10 PD-(D/E)XK nuclease superfamily - - - 0.0000000000000000000000000000000001227 137.0
BYD3_k127_7113910_11 23S rRNA-intervening sequence protein - - - 0.0000000000000000000001826 103.0
BYD3_k127_7113910_12 Smr domain - - - 0.0000000000000000000002908 100.0
BYD3_k127_7113910_13 Bacterial DNA-binding protein K03530 - - 0.000000000000000000004658 97.0
BYD3_k127_7113910_14 MatE - - - 0.0008002 42.0
BYD3_k127_7113910_2 The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) K00658 - 2.3.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002129 439.0
BYD3_k127_7113910_3 DNA modification - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004825 324.0
BYD3_k127_7113910_4 FKBP-type peptidyl-prolyl cis-trans isomerase K01802,K03772 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000215 290.0
BYD3_k127_7113910_5 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000002311 251.0
BYD3_k127_7113910_6 helicase activity - - - 0.0000000000000000000000000000000000000000000000000000002178 221.0
BYD3_k127_7113910_7 HAD-superfamily hydrolase, subfamily IIB - - - 0.00000000000000000000000000000000000000000001755 173.0
BYD3_k127_7113910_8 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) K09457 - 1.7.1.13 0.0000000000000000000000000000000000000000001378 161.0
BYD3_k127_7113910_9 Domains HisKA, HATPase_c - - - 0.00000000000000000000000000000000000006762 154.0
BYD3_k127_7157959_0 (ABC) transporter K06147,K18890 - - 9.947e-201 644.0
BYD3_k127_7157959_1 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 4.109e-196 631.0
BYD3_k127_7157959_10 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 - - 0.000000000000000000000000000000000000007366 150.0
BYD3_k127_7157959_11 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000000000000000000001765 136.0
BYD3_k127_7157959_12 Methyltransferase type 12 - - - 0.0000000000000000000000000000000522 142.0
BYD3_k127_7157959_13 Periplasmic or secreted lipoprotein - - - 0.00000000000000000002511 100.0
BYD3_k127_7157959_14 Belongs to the bacterial ribosomal protein bL35 family K02916 - - 0.000000000000000002259 86.0
BYD3_k127_7157959_15 3D domain - - - 0.00000000000004389 80.0
BYD3_k127_7157959_16 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.00000000624 64.0
BYD3_k127_7157959_2 ABC transporter, transmembrane K18889 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009524 590.0
BYD3_k127_7157959_3 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 6.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001781 432.0
BYD3_k127_7157959_4 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0040007,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001443 374.0
BYD3_k127_7157959_5 Erythromycin esterase K00573 - 2.1.1.77 0.00000000000000000000000000000000000000000000000000000000000000000000000000008287 269.0
BYD3_k127_7157959_6 Transglycosylase SLT domain K08309 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001995 278.0
BYD3_k127_7157959_7 dienelactone hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002551 255.0
BYD3_k127_7157959_8 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 - - 0.0000000000000000000000000000000000000000000000000000000000000011 224.0
BYD3_k127_7157959_9 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.000000000000000000000000000000000000000000000000000000000001919 221.0
BYD3_k127_7158322_0 amine dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002403 328.0
BYD3_k127_7158322_1 Peptidase M56, BlaR1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002481 274.0
BYD3_k127_7158322_2 - K02172 - - 0.0000000000000000000000000000000000000000000000000001834 197.0
BYD3_k127_7158322_3 Penicillinase repressor - - - 0.00000000000000000000000000000000002257 138.0
BYD3_k127_7158322_4 - - - - 0.0000000000000000001267 100.0
BYD3_k127_7158322_5 - - - - 0.0000000000000001824 90.0
BYD3_k127_7158322_6 - - - - 0.000009961 56.0
BYD3_k127_7170370_0 DEAD DEAH box K03724 - - 0.0 1824.0
BYD3_k127_7170370_1 NADH-Ubiquinone oxidoreductase (complex I), chain 5 K00341 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001525 622.0
BYD3_k127_7170370_10 NADH dehydrogenase K00334 - 1.6.5.3 0.00000000000000000000000000000000000001713 153.0
BYD3_k127_7170370_11 Belongs to the FPG family K05522 - 4.2.99.18 0.00000000000000000000000000000000001874 136.0
BYD3_k127_7170370_12 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 K00330 - 1.6.5.3 0.00000000000000000000000000000000005974 139.0
BYD3_k127_7170370_13 oxidoreductase activity - - - 0.0000000000000000000000000000000003109 152.0
BYD3_k127_7170370_14 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016020,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0030964,GO:0032991,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0044425,GO:0044459,GO:0044464,GO:0045271,GO:0045272,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0070469,GO:0070470,GO:0071704,GO:0071944,GO:0072521,GO:0098796,GO:0098797,GO:0098803,GO:1901135,GO:1901360,GO:1901564,GO:1902494,GO:1990204 1.6.5.3 0.00000000000000000000000000000004645 128.0
BYD3_k127_7170370_15 Belongs to the complex I subunit 6 family K00339 - 1.6.5.3 0.000000000000000000000000001342 118.0
BYD3_k127_7170370_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000372 492.0
BYD3_k127_7170370_3 TIGRFAM SagB-type dehydrogenase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002575 490.0
BYD3_k127_7170370_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006589 455.0
BYD3_k127_7170370_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004873 327.0
BYD3_k127_7170370_6 TIGRFAM proton-translocating NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000001588 263.0
BYD3_k127_7170370_7 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000043 248.0
BYD3_k127_7170370_8 Carboxypeptidase regulatory-like domain - - - 0.00000000000000000000000000000000000000000003138 180.0
BYD3_k127_7170370_9 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 GO:0003674,GO:0003824,GO:0003954,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564 1.6.5.3 0.000000000000000000000000000000000000008664 151.0
BYD3_k127_7188336_0 Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide K04656 - - 6.425e-271 853.0
BYD3_k127_7188336_1 Belongs to the NiFe NiFeSe hydrogenase large subunit family K06281 - 1.12.99.6 1.595e-260 817.0
BYD3_k127_7188336_2 Hydrogenase formation hypA family K04654 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004552 496.0
BYD3_k127_7188336_3 Domain of unknown function (DUF4405) - - - 0.00000000000000000000000000000000000000000000000000000002519 209.0
BYD3_k127_7188336_4 Hydrogenase maturation protease K03605 - - 0.0000000000000000000000000000000000128 144.0
BYD3_k127_7188336_5 carbon dioxide binding K04653,K04654 - - 0.00000000000000000000000000000002823 129.0
BYD3_k127_7188336_6 NiFe/NiFeSe hydrogenase small subunit C-terminal K06282,K18008 - 1.12.2.1,1.12.99.6 0.00000000000000138 78.0
BYD3_k127_7188336_7 permease K07243 - - 0.00000000000001908 79.0
BYD3_k127_7188957_0 Cupin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009859 516.0
BYD3_k127_7188957_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003042 435.0
BYD3_k127_7188957_2 TIGRFAM Cell shape determining protein MreB Mrl K03569 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003045 389.0
BYD3_k127_7188957_4 Phage tail tape measure protein TP901 - - - 0.0001846 49.0
BYD3_k127_7191444_0 Protein of unknown function (DUF3738) - - - 0.000000000000008188 83.0
BYD3_k127_7191444_1 - K02172 - - 0.000000000001424 76.0
BYD3_k127_7195499_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 3.17e-233 730.0
BYD3_k127_7195499_1 PFAM transposase mutator type K07493 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007606 584.0
BYD3_k127_7195499_10 Queuosine biosynthesis protein QueC K06920 - 6.3.4.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003455 292.0
BYD3_k127_7195499_11 ABC-type uncharacterized transport system K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008887 295.0
BYD3_k127_7195499_12 tRNA processing K06864 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000008276 270.0
BYD3_k127_7195499_13 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796,K13941 - 2.5.1.15,2.7.6.3 0.000000000000000000000000000000000000000000000000000000000000000000000000005298 261.0
BYD3_k127_7195499_14 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001251 246.0
BYD3_k127_7195499_15 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 - 4.3.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000002171 258.0
BYD3_k127_7195499_16 PFAM Class II aldolase adducin K01628 - 4.1.2.17 0.000000000000000000000000000000000000000000000000000000000000000000002844 246.0
BYD3_k127_7195499_17 Belongs to the purine pyrimidine phosphoribosyltransferase family. PyrR subfamily K02825 - 2.4.2.9 0.000000000000000000000000000000000000000000000000000000000000000000003775 239.0
BYD3_k127_7195499_18 Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000007344 244.0
BYD3_k127_7195499_19 Protein of unknown function DUF72 - - - 0.00000000000000000000000000000000000000000000000000000000000000006541 233.0
BYD3_k127_7195499_2 Heavy metal translocating P-type atpase K01534 - 3.6.3.3,3.6.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004725 547.0
BYD3_k127_7195499_20 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 - 4.1.1.23 0.0000000000000000000000000000000000000000000000000000000000000001015 231.0
BYD3_k127_7195499_21 D-Ala-D-Ala carboxypeptidase 3 (S13) family K07259 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000004882 227.0
BYD3_k127_7195499_22 endonuclease III K01142,K10773 - 3.1.11.2,4.2.99.18 0.000000000000000000000000000000000000000000000000000000000005205 215.0
BYD3_k127_7195499_23 histidine kinase A domain protein K02482 - 2.7.13.3 0.000000000000000000000000000000000000001502 165.0
BYD3_k127_7195499_24 ethanolamine catabolic process K04027 - - 0.00000000000000000000000000000000000005047 145.0
BYD3_k127_7195499_25 Belongs to the ompA family K03640 - - 0.00000000000000000000000000001255 126.0
BYD3_k127_7195499_26 ethanolamine utilization protein EutN carboxysome structural protein Ccml K04028,K08697 - - 0.00000000000000000000000000558 112.0
BYD3_k127_7195499_27 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000006885 113.0
BYD3_k127_7195499_28 Tetratricopeptide repeat - - - 0.000000000000000000000000264 113.0
BYD3_k127_7195499_29 YbbR-like protein - - - 0.0000000000000000000000006942 117.0
BYD3_k127_7195499_3 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily K01465 GO:0003674,GO:0003824,GO:0004038,GO:0004151,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006144,GO:0006145,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016787,GO:0016810,GO:0016812,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046113,GO:0046390,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 3.5.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004098 473.0
BYD3_k127_7195499_30 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K01802,K03767,K03768 - 5.2.1.8 0.0000000000000000000003601 107.0
BYD3_k127_7195499_31 ethanolamine utilization protein EutN carboxysome structural protein Ccml K04028 GO:0006950,GO:0006974,GO:0008150,GO:0009987,GO:0033554,GO:0050896,GO:0051716 - 0.0000000000000000000837 93.0
BYD3_k127_7195499_32 Ethanolamine utilisation protein EutN/carboxysome K04028 - - 0.0000000000000000005491 91.0
BYD3_k127_7195499_33 Transcriptional regulatory protein, C terminal K07667 - - 0.00000001429 64.0
BYD3_k127_7195499_34 Domain of unknown function (DUF4340) - - - 0.00000001444 67.0
BYD3_k127_7195499_35 SMART TRASH domain protein - - - 0.0000006709 55.0
BYD3_k127_7195499_36 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.000464 52.0
BYD3_k127_7195499_37 - K05826 - - 0.0005045 47.0
BYD3_k127_7195499_4 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008624 397.0
BYD3_k127_7195499_5 Belongs to the ATCase OTCase family K00609 - 2.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001961 392.0
BYD3_k127_7195499_6 ABC transporter K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009765 349.0
BYD3_k127_7195499_7 Catalyzes the conversion of dihydroorotate to orotate K00226,K00254 GO:0003674,GO:0003824,GO:0004152,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006206,GO:0006207,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009987,GO:0016491,GO:0016627,GO:0016635,GO:0018130,GO:0019856,GO:0034641,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046112,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 1.3.5.2,1.3.98.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007298 349.0
BYD3_k127_7195499_8 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00015 - 1.1.1.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003482 321.0
BYD3_k127_7195499_9 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008614,GO:0008615,GO:0009058,GO:0009110,GO:0009987,GO:0016740,GO:0016769,GO:0017144,GO:0018130,GO:0019438,GO:0033856,GO:0034641,GO:0042364,GO:0042816,GO:0042819,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072524,GO:0072525,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 2.6.99.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001363 293.0
BYD3_k127_7251241_0 Spermine/spermidine synthase domain - - - 1.299e-261 829.0
BYD3_k127_7251241_1 Belongs to the citrate synthase family K01647 - 2.3.3.1 1.325e-203 644.0
BYD3_k127_7251241_10 TIGRFAM phosphohistidine phosphatase SixA K08296 - - 0.0000000000000000000000000000000006293 136.0
BYD3_k127_7251241_11 Alpha/beta hydrolase family - - - 0.00000000000000000005391 94.0
BYD3_k127_7251241_12 CHAD domain - - - 0.000000005043 67.0
BYD3_k127_7251241_13 Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase K09862 - - 0.000006961 57.0
BYD3_k127_7251241_2 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002521 444.0
BYD3_k127_7251241_3 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002405 443.0
BYD3_k127_7251241_4 PFAM phosphate transporter K03306 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001195 416.0
BYD3_k127_7251241_5 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K01524,K07012 - 3.6.1.11,3.6.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003318 381.0
BYD3_k127_7251241_6 Peptidase family M28 - - - 0.00000000000000000000000000000000000000000000000000000000001119 231.0
BYD3_k127_7251241_7 Lipid kinase - - - 0.0000000000000000000000000000000000000000000000000002249 196.0
BYD3_k127_7251241_8 Protein of unknown function DUF47 K07220 - - 0.000000000000000000000000000000000000000000000000007033 188.0
BYD3_k127_7251241_9 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000000008473 143.0
BYD3_k127_7276200_0 DNA topological change - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009501 451.0
BYD3_k127_7276200_1 PFAM SMP-30 Gluconolaconase K08685,K14274 GO:0003674,GO:0003824,GO:0004341,GO:0005488,GO:0005509,GO:0005575,GO:0005576,GO:0005975,GO:0005996,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009110,GO:0009987,GO:0016051,GO:0016053,GO:0016787,GO:0016788,GO:0019752,GO:0019852,GO:0019853,GO:0042364,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046364,GO:0046394,GO:0046872,GO:0051186,GO:0051188,GO:0052689,GO:0071704,GO:1901576 1.4.9.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001071 399.0
BYD3_k127_7276200_2 Protein of unknown function (DUF1552) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002857 333.0
BYD3_k127_7276200_3 phosphorelay signal transduction system K02477,K07705,K21696 GO:0000156,GO:0000160,GO:0003674,GO:0007154,GO:0007165,GO:0008150,GO:0009987,GO:0023052,GO:0035556,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0060089,GO:0065007 - 0.00000000000000000000000000000000000000000000000000000000000000000000000002116 262.0
BYD3_k127_7276200_4 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000008651 237.0
BYD3_k127_7276200_5 Ankyrin repeats (many copies) - - - 0.0000000000000000000000000000005719 139.0
BYD3_k127_7323802_0 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01916 - 6.3.1.5 1.779e-206 655.0
BYD3_k127_7323802_1 Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) K00097,K22024 - 1.1.1.262,1.1.1.408,1.1.1.409 0.0000000000000000000000000000000000000000000000000000000000000000000000000001236 266.0
BYD3_k127_7323802_2 PFAM aminotransferase, class I K00812,K10907 - 2.6.1.1 0.0000000000000000000000000000000000000000000000000006413 198.0
BYD3_k127_7323802_3 DNA polymerase III K02341 - 2.7.7.7 0.00000000000000000000000000000000000000000000000004726 192.0
BYD3_k127_7323802_4 Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene K03664 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0070930,GO:0071704,GO:0097159,GO:1901363,GO:1901564 - 0.00000000000000000000000000000000000000000000003782 177.0
BYD3_k127_7323802_5 Transglycosylase - - - 0.000000000000000000000000000000000000000000002687 176.0
BYD3_k127_7323802_6 Vitamin K-dependent gamma-carboxylase - - - 0.000000000000001597 81.0
BYD3_k127_7333781_0 Pyridoxal-dependent decarboxylase, pyridoxal binding domain K01585 - 4.1.1.19 8.163e-232 728.0
BYD3_k127_7333781_1 oligoendopeptidase F K08602 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000771 625.0
BYD3_k127_7333781_2 Carbohydrate family 9 binding domain-like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004752 512.0
BYD3_k127_7333781_3 Threonine synthase K01733 - 4.2.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005283 382.0
BYD3_k127_7333781_4 Thioesterase superfamily K10806 - - 0.000000000000000000000000000004911 125.0
BYD3_k127_7333781_5 - - - - 0.0000000009614 68.0
BYD3_k127_7369725_0 PQQ-like domain K05889 - 1.1.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000611 523.0
BYD3_k127_7369725_1 Trehalose utilisation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007602 417.0
BYD3_k127_7369725_10 peptidyl-tyrosine sulfation - - - 0.000454 52.0
BYD3_k127_7369725_11 Transcriptional regulatory protein, C terminal - - - 0.0007939 51.0
BYD3_k127_7369725_2 transcriptional regulator K13633 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001035 358.0
BYD3_k127_7369725_3 serine-type endopeptidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001403 296.0
BYD3_k127_7369725_4 Rhodanese Homology Domain - - - 0.0000000000000000000000000000000000000000000000000001278 190.0
BYD3_k127_7369725_5 PFAM peptidase S1 and S6, chymotrypsin Hap - - - 0.0000000000000000000000000000000000000000000000008656 192.0
BYD3_k127_7369725_6 - - - - 0.0000000000000000000000000000000000000002054 169.0
BYD3_k127_7369725_7 SnoaL-like domain - - - 0.00000000000000000000000000000000029 138.0
BYD3_k127_7369725_8 - - - - 0.0000000000000000000000007976 114.0
BYD3_k127_7369725_9 helix_turn_helix, Lux Regulon - - - 0.0000000000000003893 84.0
BYD3_k127_7414205_0 PFAM Radical SAM - - - 2.718e-221 696.0
BYD3_k127_7414205_2 Necessary for the succinyl substitution of periplasmic glucans. Could catalyze the transfer of succinyl residues from the cytoplasmic side of the membrane to the nascent glucan backbones on the periplasmic side of the membrane K11941 - - 0.00000000000000000000000000000000000006359 150.0
BYD3_k127_7414205_3 Alpha beta hydrolase fold-3 domain protein - - - 0.00000000000000000000000000000009827 129.0
BYD3_k127_7467770_0 Trypsin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002865 366.0
BYD3_k127_7467770_1 cAMP biosynthetic process K08282,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000005721 286.0
BYD3_k127_7467770_2 Glucose / Sorbosone dehydrogenase K21430 - - 0.00000000000000000000000000000000000000000000000000000000000000000002397 243.0
BYD3_k127_7467770_3 Protein of unknown function (DUF1569) - - - 0.0000000000000000000000000000000000001752 149.0
BYD3_k127_7494464_0 PFAM Orn Lys Arg decarboxylase K01584 - 4.1.1.19 2.447e-241 769.0
BYD3_k127_7494464_1 WD40-like Beta Propeller Repeat - - - 3.455e-197 649.0
BYD3_k127_7494464_10 Two component transcriptional regulator, LuxR family - - - 0.00000000000000000000000000000000000003342 151.0
BYD3_k127_7494464_11 - - - - 0.0000000000000000000000000000001239 136.0
BYD3_k127_7494464_12 Sodium Bile acid symporter family - - - 0.0000000000000000000000000000001265 134.0
BYD3_k127_7494464_13 - - - - 0.0000000000000000000000000001385 130.0
BYD3_k127_7494464_14 PFAM von Willebrand factor type A - - - 0.0000000000000000000000000007621 123.0
BYD3_k127_7494464_15 DinB family - - - 0.000000000000002707 79.0
BYD3_k127_7494464_16 Putative Actinobacterial Holin-X, holin superfamily III - - - 0.000000000000006255 80.0
BYD3_k127_7494464_17 PHP domain protein - - - 0.0000000000000215 85.0
BYD3_k127_7494464_18 PFAM response regulator receiver K03413 - - 0.0000000000004161 74.0
BYD3_k127_7494464_19 Calcineurin-like phosphoesterase superfamily domain - - - 0.000000000001072 77.0
BYD3_k127_7494464_2 Histidine kinase internal region K02478 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002104 354.0
BYD3_k127_7494464_20 spectrin binding - - - 0.000000000009366 77.0
BYD3_k127_7494464_21 Surface antigen - - - 0.00001009 58.0
BYD3_k127_7494464_3 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008614 319.0
BYD3_k127_7494464_4 Two component transcriptional regulator, LytTR family K02477,K07705 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001403 268.0
BYD3_k127_7494464_5 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000002242 239.0
BYD3_k127_7494464_6 ubiE/COQ5 methyltransferase family K00570 - 2.1.1.17,2.1.1.71 0.0000000000000000000000000000000000000000000000000000000003509 209.0
BYD3_k127_7494464_7 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00337,K00338 GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0030312,GO:0044424,GO:0044444,GO:0044464,GO:0071944 1.6.5.3 0.0000000000000000000000000000000000000000000003152 170.0
BYD3_k127_7494464_8 MarC family integral membrane protein K05595 - - 0.00000000000000000000000000000000000000000005566 168.0
BYD3_k127_7494464_9 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.0000000000000000000000000000000000000000005072 167.0
BYD3_k127_7496378_0 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005479 402.0
BYD3_k127_7496378_1 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001135 319.0
BYD3_k127_7496378_10 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 - - 0.000000000000000000000000000000000000000000005088 168.0
BYD3_k127_7496378_11 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 - - 0.00000000000000000000000000000000000004365 152.0
BYD3_k127_7496378_12 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 - - 0.000000000000000000000000000000000004251 140.0
BYD3_k127_7496378_13 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit K02895 - - 0.0000000000000000000000000000000002254 134.0
BYD3_k127_7496378_14 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 - - 0.0000000000000000000000000003777 120.0
BYD3_k127_7496378_15 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 - - 0.000000000000000000000000011 111.0
BYD3_k127_7496378_16 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 - - 0.000000000000000000000006339 106.0
BYD3_k127_7496378_17 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 - - 0.000000000000000000000328 97.0
BYD3_k127_7496378_18 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.0000000000000000976 79.0
BYD3_k127_7496378_19 Ribosomal protein L30 K02907 - - 0.000000000001252 69.0
BYD3_k127_7496378_2 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000001393 263.0
BYD3_k127_7496378_20 Belongs to the universal ribosomal protein uL29 family K02904 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000008079 55.0
BYD3_k127_7496378_3 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.00000000000000000000000000000000000000000000000000000000000000000000002289 248.0
BYD3_k127_7496378_4 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 - - 0.000000000000000000000000000000000000000000000000000000000000000006524 227.0
BYD3_k127_7496378_5 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000009856 217.0
BYD3_k127_7496378_6 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 - - 0.00000000000000000000000000000000000000000000000000000000003505 211.0
BYD3_k127_7496378_7 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 - - 0.0000000000000000000000000000000000000000000000000000003281 195.0
BYD3_k127_7496378_8 One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome K02926 - - 0.000000000000000000000000000000000000000000000000000006287 198.0
BYD3_k127_7496378_9 Involved in the binding of tRNA to the ribosomes K02946 - - 0.000000000000000000000000000000000000000000000000005974 185.0
BYD3_k127_7530119_0 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.00000000000000000000000000000000000000000000006204 183.0
BYD3_k127_7530119_1 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.000000000000000000000002342 106.0
BYD3_k127_7558809_0 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain K01684 - 4.2.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000244 492.0
BYD3_k127_7558809_2 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001306 338.0
BYD3_k127_7558809_3 belongs to the aldehyde dehydrogenase family K00140,K22187 - 1.2.1.18,1.2.1.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001239 319.0
BYD3_k127_7572799_0 PQQ enzyme repeat K00117 - 1.1.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000921 604.0
BYD3_k127_7572799_1 von Willebrand factor, type A K07114 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000934 542.0
BYD3_k127_7572799_10 Fusaric acid resistance protein-like - - - 0.0000000000000000000000000000000001175 139.0
BYD3_k127_7572799_11 - - - - 0.0000000000000000000000000002289 123.0
BYD3_k127_7572799_12 serine-type D-Ala-D-Ala carboxypeptidase activity K07259 - 3.4.16.4 0.0000000000000000000000006794 115.0
BYD3_k127_7572799_13 - - - - 0.0000000003437 71.0
BYD3_k127_7572799_2 Winged helix DNA-binding domain K09927 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008855 461.0
BYD3_k127_7572799_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004719 387.0
BYD3_k127_7572799_4 Protein of unknown function (DUF3738) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003952 289.0
BYD3_k127_7572799_5 glucose sorbosone - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002315 283.0
BYD3_k127_7572799_6 COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007576 277.0
BYD3_k127_7572799_7 Domain of unknown function (DUF4159) - - - 0.00000000000000000000000000000000000000000003336 169.0
BYD3_k127_7572799_8 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.0000000000000000000000000000000000000002074 158.0
BYD3_k127_7572799_9 helix_turn_helix, cAMP Regulatory protein K01420 - - 0.00000000000000000000000000000000005883 142.0
BYD3_k127_7574206_0 FAD binding domain K00480 - 1.14.13.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001967 575.0
BYD3_k127_7574206_1 Acid phosphatase homologues K19302 - 3.6.1.27 0.000000000000000000000000000000000000000000000000000000000000000000000008859 250.0
BYD3_k127_7574206_2 Cysteine-rich secretory protein family - - - 0.00000000000000000000000003583 114.0
BYD3_k127_7574206_3 Carboxypeptidase regulatory-like domain - - - 0.0000000000000000003971 103.0
BYD3_k127_7584978_0 Peptidase S9 prolyl oligopeptidase active site domain protein - - - 2.06e-244 769.0
BYD3_k127_7584978_1 PFAM Prenyltransferase squalene oxidase K06015 - 3.5.1.81 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007324 488.0
BYD3_k127_7584978_2 WD40 domain protein beta Propeller K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001074 408.0
BYD3_k127_7584978_3 Enoyl-(Acyl carrier protein) reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004689 276.0
BYD3_k127_7584978_4 Aldo/keto reductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001622 270.0
BYD3_k127_7584978_5 PIN domain - - - 0.00000001932 61.0
BYD3_k127_7621847_0 symbiont process K00612 - - 2.481e-288 895.0
BYD3_k127_7621847_1 cellulose binding - - - 2.165e-218 680.0
BYD3_k127_7621847_2 Sugar (and other) transporter - - - 7.206e-201 636.0
BYD3_k127_7621847_3 DNA topological change K03168 - 5.99.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003313 587.0
BYD3_k127_7621847_4 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006795 446.0
BYD3_k127_7621847_5 Protein of unknown function (DUF1552) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001101 312.0
BYD3_k127_7621847_6 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005517 252.0
BYD3_k127_7621847_7 - - - - 0.000000000000000000000000000001772 126.0
BYD3_k127_7621847_8 Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin - - - 0.00004623 53.0
BYD3_k127_7628619_0 ATPases associated with a variety of cellular activities K09691 - - 0.000000000000000000000000000000000000000000000000000000000000000000001371 252.0
BYD3_k127_7628619_1 - - - - 0.0000000000000000000000000000000000000000002083 170.0
BYD3_k127_7628619_2 - - - - 0.00000000000000000004458 102.0
BYD3_k127_7628619_4 PFAM ABC-2 type transporter K09690 - - 0.0000001994 57.0
BYD3_k127_7629429_0 Sigma factor PP2C-like phosphatases K07315 - 3.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000181 362.0
BYD3_k127_7629429_1 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007518 280.0
BYD3_k127_7629429_2 - - - - 0.00000000000000000000000000000000000000000000000000000000003632 227.0
BYD3_k127_7629429_3 - K06992 - - 0.000000000000000000000000000000000000000000000000006512 189.0
BYD3_k127_7629429_4 - - - - 0.00000000000000000000000000000000000000133 158.0
BYD3_k127_7629429_5 - - - - 0.0000000000000000000000000000000009448 140.0
BYD3_k127_7629429_6 - - - - 0.0000000000000000000000003984 115.0
BYD3_k127_7629429_7 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.0000000000001466 81.0
BYD3_k127_7629783_0 Aldo/keto reductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008485 305.0
BYD3_k127_7629783_1 response regulator K02282 - - 0.00000000000000000000000000000000000000000000000000000000000003106 221.0
BYD3_k127_7629783_2 Histidine kinase K07683 - 2.7.13.3 0.00000000000000000000000000000000000000000000002032 185.0
BYD3_k127_7629783_3 Protein of unknown function (DUF3302) - - - 0.00000000000000000000000000000001056 132.0
BYD3_k127_7629783_4 Biotin-lipoyl like - - - 0.000000000000000000000000003539 113.0
BYD3_k127_7629783_5 helix_turn_helix, arabinose operon control protein K04033 - - 0.000000000000000001848 91.0
BYD3_k127_7642091_0 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000118 621.0
BYD3_k127_7642091_1 ASPIC and UnbV - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002152 438.0
BYD3_k127_7642091_10 TonB-dependent receptor - - - 0.0000000000000000000000000008966 132.0
BYD3_k127_7642091_11 Gas vesicle protein K - - - 0.00000000000000000000000002652 113.0
BYD3_k127_7642091_12 Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth. GvpA type proteins form the essential core of the structure - - - 0.00000000000000000000000009614 109.0
BYD3_k127_7642091_13 Domain of unknown function (DUF4154) - - - 0.0000000000000000000000001316 113.0
BYD3_k127_7642091_14 Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth - - - 0.0000000000000000000000311 105.0
BYD3_k127_7642091_15 Gas vesicle - - - 0.0000000000000000000002066 108.0
BYD3_k127_7642091_16 Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth - - - 0.000001307 54.0
BYD3_k127_7642091_17 Glycosyl transferase family 41 - - - 0.000008758 59.0
BYD3_k127_7642091_18 Gas vesicle protein G - - - 0.000009184 55.0
BYD3_k127_7642091_19 domain protein - - - 0.0001628 55.0
BYD3_k127_7642091_2 TonB-dependent receptor K02014,K16089 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002172 433.0
BYD3_k127_7642091_20 Gas vesicle synthesis protein GvpL/GvpF - - - 0.0006705 49.0
BYD3_k127_7642091_3 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009595 417.0
BYD3_k127_7642091_4 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000333 392.0
BYD3_k127_7642091_5 heat shock protein binding K05516 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004375 319.0
BYD3_k127_7642091_6 Belongs to the FPG family K05522 - 4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000000002369 257.0
BYD3_k127_7642091_7 cheY-homologous receiver domain - - - 0.00000000000000000000000000000000000000000000000000002145 191.0
BYD3_k127_7642091_8 Protein of unknown function (DUF520) K09767 - - 0.0000000000000000000000000000000000000000000000000000602 191.0
BYD3_k127_7642091_9 to YegS from E. coli K07029 GO:0003674,GO:0003824,GO:0004143,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237 2.7.1.107 0.0000000000000000000000000000000005492 144.0
BYD3_k127_7669751_0 MacB-like periplasmic core domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001954 507.0
BYD3_k127_7669751_1 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 - 5.3.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001458 433.0
BYD3_k127_7669751_10 NUDIX domain - - - 0.0000000000000000000000000000000000000000002839 162.0
BYD3_k127_7669751_11 Cytidine and deoxycytidylate deaminase zinc-binding region K01489 - 3.5.4.5 0.000000000000000000000000000000000000000002148 160.0
BYD3_k127_7669751_12 - K01992,K19341 - - 0.000000000000000000000000000001849 133.0
BYD3_k127_7669751_13 Gamma-glutamyl cyclotransferase, AIG2-like - - - 0.00000000000000003534 87.0
BYD3_k127_7669751_14 - - - - 0.0000000000002032 81.0
BYD3_k127_7669751_15 - - - - 0.00000001089 67.0
BYD3_k127_7669751_16 RESPONSE REGULATOR receiver K02658 - - 0.000003982 53.0
BYD3_k127_7669751_2 Na dependent nucleoside K03317 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003113 420.0
BYD3_k127_7669751_3 The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate K03783 - 2.4.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007201 332.0
BYD3_k127_7669751_4 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009607 320.0
BYD3_k127_7669751_5 ATPase activity K01990,K19340 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001009 321.0
BYD3_k127_7669751_6 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 GO:0000408,GO:0002949,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070525,GO:0071704,GO:0090304,GO:1901360 2.3.1.234 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002947 308.0
BYD3_k127_7669751_7 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.000000000000000000000000000000000000000000000000000000000000000000795 233.0
BYD3_k127_7669751_8 Uncharacterised protein family UPF0047 - - - 0.00000000000000000000000000000000000000000000000000000000000000002654 225.0
BYD3_k127_7669751_9 pyrimidine-nucleoside phosphorylase K00756,K00758 - 2.4.2.2,2.4.2.4 0.000000000000000000000000000000000000000000000000005138 188.0
BYD3_k127_7670915_0 Bacterial regulatory protein, Fis family K02481 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001847 483.0
BYD3_k127_7670915_1 Histidine kinase K10125 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000008139 262.0
BYD3_k127_7670915_2 Outer membrane efflux protein - - - 0.00000000000000000000000000000000000000000000000000000000000006784 229.0
BYD3_k127_7670915_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798,K15727 - - 0.000000000000000000000000000000000000000000001336 173.0
BYD3_k127_7670915_4 Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains K02481 - - 0.00000000004185 66.0
BYD3_k127_768551_0 Rhodanese-like domain K01069 - 3.1.2.6 8.581e-217 682.0
BYD3_k127_768551_1 Polyphosphate kinase 2 (PPK2) K22468 - 2.7.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001217 424.0
BYD3_k127_768551_10 COG0666 FOG Ankyrin repeat - - - 0.00000000000000000000000000000002402 138.0
BYD3_k127_768551_11 sulfite oxidase - - - 0.0000000000000000000003887 102.0
BYD3_k127_768551_12 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 - - 0.0000000000000000001182 93.0
BYD3_k127_768551_13 - - - - 0.00000918 54.0
BYD3_k127_768551_2 Beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007953 428.0
BYD3_k127_768551_3 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003358 302.0
BYD3_k127_768551_4 Enoyl-(Acyl carrier protein) reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002764 256.0
BYD3_k127_768551_5 Amidohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003035 269.0
BYD3_k127_768551_6 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions K01507 - 3.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000001673 254.0
BYD3_k127_768551_7 Protein of unknown function (DUF1326) - - - 0.00000000000000000000000000000000000000000000000000000000000000004821 231.0
BYD3_k127_768551_8 - K02172 - - 0.0000000000000000000000000000000000005314 151.0
BYD3_k127_768551_9 Peptidyl-prolyl cis-trans isomerase K01802,K03772,K03773 - 5.2.1.8 0.0000000000000000000000000000000003256 143.0
BYD3_k127_7708008_0 SMART Tetratricopeptide domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007738 302.0
BYD3_k127_7708008_1 PFAM glycosyl transferase family 39 - - - 0.00000000000000000000000000000000000000000000000000000000000000001083 250.0
BYD3_k127_7708008_2 Removes the phosphate from trehalose 6-phosphate to produce free trehalose K01087 - 3.1.3.12 0.0000000000000000000000000000000000000000000004819 177.0
BYD3_k127_7708008_3 Bacterial transcriptional repressor C-terminal - - - 0.00000000000000000000000000000202 124.0
BYD3_k127_7708008_4 glyoxalase III activity K00799 - 2.5.1.18 0.00000000002712 74.0
BYD3_k127_7708008_5 glycosyl transferase family K00697,K16055 - 2.4.1.15,2.4.1.347,3.1.3.12 0.0000000005154 62.0
BYD3_k127_771148_0 ABC transporter K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002355 340.0
BYD3_k127_771148_1 Beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001316 342.0
BYD3_k127_771148_2 Transcriptional regulatory protein, C terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007364 299.0
BYD3_k127_771148_3 ATPase activity K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001311 276.0
BYD3_k127_771148_4 enterobactin catabolic process K07214,K09689 - 3.6.3.38 0.00000000000000000000000000000000000006423 162.0
BYD3_k127_771148_5 helix_turn_helix gluconate operon transcriptional repressor K07979 - - 0.000000000000000000000000000000000004209 141.0
BYD3_k127_771148_6 Transcriptional regulator K07979 - - 0.0000000000000000000000000000001311 129.0
BYD3_k127_7720579_0 ATP:ADP antiporter activity K01932,K03301 - - 0.00000000000000000000000000000000000000000000000000003036 199.0
BYD3_k127_7720579_1 Protein kinase domain - - - 0.0000000000000000000000002902 115.0
BYD3_k127_7801493_0 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000001154 209.0
BYD3_k127_7801493_1 - K02172 - - 0.0000000000000000000000000000000000001709 151.0
BYD3_k127_7801493_2 Transcriptional regulator PadR-like family - - - 0.0000000000000000000000000000001882 126.0
BYD3_k127_7803987_0 homoserine dehydrogenase K12524 - 1.1.1.3,2.7.2.4 7.026e-266 842.0
BYD3_k127_7803987_1 PQQ-like domain K00114 - 1.1.2.8 1.791e-227 716.0
BYD3_k127_7803987_10 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006105 293.0
BYD3_k127_7803987_11 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002565 286.0
BYD3_k127_7803987_12 Phosphoadenosine phosphosulfate reductase family K00957 - 2.7.7.4 0.000000000000000000000000000000000000000000000000000000000000000000000000001751 255.0
BYD3_k127_7803987_13 Phosphoadenosine phosphosulfate reductase family K00390 - 1.8.4.10,1.8.4.8 0.0000000000000000000000000000000000000000000000000000000000000000000000003002 252.0
BYD3_k127_7803987_14 Predicted metal-binding integral membrane protein (DUF2182) - - - 0.000000000000000000000000000000000000000000000000000000000002488 218.0
BYD3_k127_7803987_15 - - - - 0.00000000000000000000000000000000000000000000000000000000003155 212.0
BYD3_k127_7803987_16 carboxymuconolactone decarboxylase K01607 - 4.1.1.44 0.00000000000000000000000000000000000000000000000756 177.0
BYD3_k127_7803987_17 Sigma-70, region 4 K03088 - - 0.00000000000000000000000000000000000000000000001442 177.0
BYD3_k127_7803987_18 - - - - 0.00000000000000000000000000000000000000003898 168.0
BYD3_k127_7803987_19 HEAT repeats - - - 0.00000000000000000000000000000000000000008104 165.0
BYD3_k127_7803987_2 Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate K00451 - 1.13.11.5 6.033e-209 656.0
BYD3_k127_7803987_20 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000002619 145.0
BYD3_k127_7803987_21 Cupin 2, conserved barrel - - - 0.000000000000000000000000007462 120.0
BYD3_k127_7803987_22 GAF domain-containing protein K02584,K07315,K08968 - 1.8.4.14,3.1.3.3 0.00000000000000003545 91.0
BYD3_k127_7803987_23 PBS lyase HEAT-like repeat - - - 0.000000000002087 77.0
BYD3_k127_7803987_3 Catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia K01426 - 3.5.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002912 576.0
BYD3_k127_7803987_4 Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN NodQ subfamily K00956 - 2.7.7.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001655 475.0
BYD3_k127_7803987_5 COG1131 ABC-type multidrug transport system ATPase component K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003375 440.0
BYD3_k127_7803987_6 Transport permease protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005545 371.0
BYD3_k127_7803987_7 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007857 378.0
BYD3_k127_7803987_8 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002808 331.0
BYD3_k127_7803987_9 Major Facilitator Superfamily K08191 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002069 302.0
BYD3_k127_7839444_0 Belongs to the PEP-utilizing enzyme family K01006 - 2.7.9.1 0.0 1487.0
BYD3_k127_7839444_1 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 1.51e-226 714.0
BYD3_k127_7839444_10 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000205 379.0
BYD3_k127_7839444_11 Acts as a magnesium transporter K03281,K04767,K06213,K15986 GO:0000287,GO:0003674,GO:0005488,GO:0005515,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0015693,GO:0030001,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0046872,GO:0046983,GO:0051179,GO:0051234,GO:0070838,GO:0072511 3.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004138 384.0
BYD3_k127_7839444_12 glycyl-tRNA synthetase alpha subunit K01878 - 6.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007201 375.0
BYD3_k127_7839444_13 PFAM Extracellular ligand-binding receptor K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001162 379.0
BYD3_k127_7839444_14 PhoH-like protein K06217 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000103 367.0
BYD3_k127_7839444_15 Belongs to the SIS family. GutQ KpsF subfamily K01627,K03281,K06041 - 2.5.1.55,5.3.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000122 354.0
BYD3_k127_7839444_16 Belongs to the dCTP deaminase family K01494 - 3.5.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003706 328.0
BYD3_k127_7839444_17 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001447 321.0
BYD3_k127_7839444_18 Belongs to the KdsA family K01627 - 2.5.1.55 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001398 309.0
BYD3_k127_7839444_19 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002162 305.0
BYD3_k127_7839444_2 L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp K01876 - 6.1.1.12 3.577e-207 659.0
BYD3_k127_7839444_20 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001519 307.0
BYD3_k127_7839444_21 ABC transporter, ATP-binding protein K01996 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001211 292.0
BYD3_k127_7839444_22 ABC transporter K01995 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003076 304.0
BYD3_k127_7839444_23 Branched-chain amino acid transport system / permease component K01995,K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004483 295.0
BYD3_k127_7839444_24 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000001826 267.0
BYD3_k127_7839444_25 Transporter associated domain K06189 - - 0.0000000000000000000000000000000000000000000000000000000000009694 225.0
BYD3_k127_7839444_26 Mediates influx of magnesium ions K03284 - - 0.0000000000000000000000000000000000000000000000000000005664 204.0
BYD3_k127_7839444_27 Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane K19804 - - 0.000000000000000000000000000000000000000000000000000001636 207.0
BYD3_k127_7839444_28 NDK K00940 GO:0003674,GO:0003824,GO:0004550,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006165,GO:0006220,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009132,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0019205,GO:0019637,GO:0034641,GO:0044237,GO:0044238,GO:0044281,GO:0044464,GO:0046483,GO:0046939,GO:0055086,GO:0071704,GO:0072521,GO:0072527,GO:1901360,GO:1901564 2.7.4.6 0.000000000000000000000000000000000000000000000000000008084 196.0
BYD3_k127_7839444_29 DNA-templated transcription, initiation - - - 0.000000000000000000000000000000000000000000002695 177.0
BYD3_k127_7839444_3 acetyl-CoA carboxylase, biotin carboxylase K01961 - 6.3.4.14,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009507 606.0
BYD3_k127_7839444_30 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 - 2.7.1.24 0.000000000000000000000000000000000000000005481 161.0
BYD3_k127_7839444_31 PFAM peptidase M24 K01262,K01271 - 3.4.11.9,3.4.13.9 0.00000000000000000000000000000000000000008042 154.0
BYD3_k127_7839444_32 TIGRFAM VWFA-related Acidobacterial domain - - - 0.000000000000000000000000000000000003396 158.0
BYD3_k127_7839444_33 Peptidase MA superfamily - - - 0.00000000000000000000000000000000000533 151.0
BYD3_k127_7839444_34 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.00000000000000000000000000000001034 133.0
BYD3_k127_7839444_35 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 - 2.5.1.3 0.00000000000000000000000000000006646 132.0
BYD3_k127_7839444_36 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 - - 0.000000000000000000000000000001984 121.0
BYD3_k127_7839444_37 - - - - 0.00000000000000000000000000004209 123.0
BYD3_k127_7839444_38 RNA polymerase sigma factor K03088 - - 0.0000000000000000000000000001317 122.0
BYD3_k127_7839444_39 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.0000000000000000000000000005313 121.0
BYD3_k127_7839444_4 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001243 518.0
BYD3_k127_7839444_40 Involved in DNA repair and RecF pathway recombination K03584 - - 0.0000000000000000000000002323 115.0
BYD3_k127_7839444_41 - - - - 0.000000000000000001009 96.0
BYD3_k127_7839444_42 Protein of unknown function (DUF2905) - - - 0.000000000000001539 78.0
BYD3_k127_7839444_43 - - - - 0.00006495 53.0
BYD3_k127_7839444_5 D-isomer specific 2-hydroxyacid dehydrogenase K00058 - 1.1.1.399,1.1.1.95 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000125 464.0
BYD3_k127_7839444_6 PFAM tRNA synthetase class II (G H P and S) K01892 - 6.1.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005323 455.0
BYD3_k127_7839444_7 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003133 429.0
BYD3_k127_7839444_8 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001367 441.0
BYD3_k127_7839444_9 Glutathione synthase Ribosomal protein S6 modification enzyme (Glutaminyl transferase) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005759 390.0
BYD3_k127_7862311_0 ATP-dependent peptidase activity K01338 - 3.4.21.53 7.933e-248 788.0
BYD3_k127_7862311_1 Belongs to the citrate synthase family K01647 - 2.3.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001063 496.0
BYD3_k127_7862311_10 Protein of unknown function (DUF1572) - - - 0.000000000000000000000000000000000004976 145.0
BYD3_k127_7862311_11 FAD binding domain - - - 0.000000000000000000000000000000000007193 153.0
BYD3_k127_7862311_12 NnrU protein K21310 - 2.1.1.334 0.00000000000000000000000000000004544 134.0
BYD3_k127_7862311_13 Isoprenylcysteine carboxyl methyltransferase K16168 - - 0.000000000000000000003281 107.0
BYD3_k127_7862311_14 - - - - 0.00000000000000000000806 95.0
BYD3_k127_7862311_2 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009568 439.0
BYD3_k127_7862311_3 3-oxoacyl-[acyl-carrier-protein] synthase activity K09458 - 2.3.1.179 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004975 400.0
BYD3_k127_7862311_4 Tetratricopeptide repeats - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000029 352.0
BYD3_k127_7862311_5 TIGRFAM RarD protein, DMT superfamily transporter K05786 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001301 290.0
BYD3_k127_7862311_6 PFAM Rhomboid family K07059 - - 0.000000000000000000000000000000000000000000000000000000000000000002538 233.0
BYD3_k127_7862311_7 Peptidase family M28 - - - 0.00000000000000000000000000000000000000000000000000000000117 223.0
BYD3_k127_7862311_8 Glycosyl transferase family 1 - - - 0.000000000000000000000000000000000000002351 155.0
BYD3_k127_7862311_9 Domain in cystathionine beta-synthase and other proteins. - - - 0.00000000000000000000000000000000000002675 147.0
BYD3_k127_7898506_0 Pyridine nucleotide-disulphide oxidoreductase - - - 0.0 1268.0
BYD3_k127_7898506_1 Belongs to the bacterial glucokinase family K00845 - 2.7.1.2 0.000000000000000000000000000000000000000000000000000000000000000000009985 250.0
BYD3_k127_7898506_2 DEAD DEAH box helicase - - - 0.000000000000000000000000000000000000309 143.0
BYD3_k127_7898506_3 Tetratricopeptide repeat - - - 0.0000000000000000000000000000001096 141.0
BYD3_k127_7898506_4 - - - - 0.00000000000000000141 93.0
BYD3_k127_7908525_0 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001211 481.0
BYD3_k127_7908525_1 it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins K02314 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002635 479.0
BYD3_k127_7908525_10 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03564 - 1.11.1.15 0.0000000000000000000000000000000000000000000003521 172.0
BYD3_k127_7908525_11 - - - - 0.0000000000000000000000000000000000006045 152.0
BYD3_k127_7908525_12 B3/4 domain - - - 0.0000000000000000000000000000001609 133.0
BYD3_k127_7908525_13 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.000000000000000003056 86.0
BYD3_k127_7908525_15 - - - - 0.00001734 49.0
BYD3_k127_7908525_2 major facilitator superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008878 402.0
BYD3_k127_7908525_3 Large family of predicted nucleotide-binding domains - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002565 387.0
BYD3_k127_7908525_4 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770,K12506 - 2.7.7.60,4.6.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006402 299.0
BYD3_k127_7908525_5 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000002228 277.0
BYD3_k127_7908525_6 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000001142 233.0
BYD3_k127_7908525_7 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03218 - 2.1.1.185 0.000000000000000000000000000000000000000000000000000000000007707 217.0
BYD3_k127_7908525_8 phosphorelay signal transduction system K02477,K07705,K21696 GO:0000156,GO:0000160,GO:0003674,GO:0007154,GO:0007165,GO:0008150,GO:0009987,GO:0023052,GO:0035556,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0060089,GO:0065007 - 0.0000000000000000000000000000000000000000000000000000009562 198.0
BYD3_k127_7908525_9 Phosphate acyltransferases K00655 - 2.3.1.51 0.0000000000000000000000000000000000000000000003516 180.0
BYD3_k127_7946651_0 PD-(D/E)XK nuclease superfamily - - - 0.000000000000000000000000000000000137 137.0
BYD3_k127_7946651_1 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.0000004852 53.0
BYD3_k127_7946651_2 Flp Fap pilin component K02651 - - 0.00001984 53.0
BYD3_k127_7951208_0 Tannase and feruloyl esterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003782 448.0
BYD3_k127_7951208_1 Sulfatase-modifying factor enzyme 1 - - - 0.000000000000000000000000000000000000000000000000000000001705 216.0
BYD3_k127_7951208_2 FAD binding domain K00481 - 1.14.13.2 0.00000000000000000000000000000000000000000000000000000002847 199.0
BYD3_k127_7951208_3 - - - - 0.00000001249 57.0
BYD3_k127_8072219_0 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity K07456 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000034 461.0
BYD3_k127_8072219_1 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002717 375.0
BYD3_k127_8072219_2 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.0000000000000000000000000000000000000000000000000000142 193.0
BYD3_k127_8079093_0 PQQ-like domain K00114 - 1.1.2.8 3.402e-243 764.0
BYD3_k127_8079093_1 PQQ enzyme repeat K00114 - 1.1.2.8 4.317e-242 760.0
BYD3_k127_8079093_10 - - - - 0.0000000000000000000001209 112.0
BYD3_k127_8079093_11 - - - - 0.00000000000000004881 94.0
BYD3_k127_8079093_12 Gram-negative bacterial TonB protein C-terminal - - - 0.000006595 58.0
BYD3_k127_8079093_2 Domain of Unknown Function (DUF1080) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005891 327.0
BYD3_k127_8079093_3 Xylose isomerase-like TIM barrel - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001195 317.0
BYD3_k127_8079093_4 PFAM Cytochrome C - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008367 311.0
BYD3_k127_8079093_5 Glucose sorbosone K21430 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003725 317.0
BYD3_k127_8079093_6 Glucose / Sorbosone dehydrogenase K21430 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000124 290.0
BYD3_k127_8079093_7 Cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003235 248.0
BYD3_k127_8079093_8 Protein of unknown function (DUF3052) - - - 0.0000000000000000000000000000000000000000104 158.0
BYD3_k127_8079093_9 HNH endonuclease K07454 - - 0.000000000000000000000000000001479 125.0
BYD3_k127_8092447_0 Alpha/beta hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001652 285.0
BYD3_k127_8092447_1 Belongs to the pseudouridine synthase RsuA family K06178,K06183 - 5.4.99.19,5.4.99.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000003283 263.0
BYD3_k127_8092447_2 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.000000000000000000000000000000000000000000000000000000000009112 215.0
BYD3_k127_8092447_3 Cytidylate kinase-like family K00945 GO:0003674,GO:0003824,GO:0004127,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006573,GO:0006575,GO:0006725,GO:0006732,GO:0006753,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0034654,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046939,GO:0046940,GO:0050145,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.4.25 0.00000000000000000000000000000000000000000000000000002347 195.0
BYD3_k127_8092447_4 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 GO:0003674,GO:0005488,GO:0005515,GO:0042802 - 0.0000000000000000000000000000000000000000000345 170.0
BYD3_k127_8092447_5 DNA-templated transcription, initiation K03088 - - 0.00000000000000000000000000000000000000007517 157.0
BYD3_k127_8092447_7 - - - - 0.00000000000000000000004366 108.0
BYD3_k127_8092629_0 ThiC-associated domain K03147 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.99.17 3.702e-258 804.0
BYD3_k127_8092629_1 WD40-like Beta Propeller Repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001237 621.0
BYD3_k127_8092629_10 Thioredoxin K03672 - 1.8.1.8 0.00000000000000000000000000000000001303 140.0
BYD3_k127_8092629_11 sister chromatid segregation - - - 0.00000000000000001047 88.0
BYD3_k127_8092629_12 peptidyl-tyrosine sulfation - - - 0.0000003081 63.0
BYD3_k127_8092629_2 Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues K01299 - 3.4.17.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002763 542.0
BYD3_k127_8092629_3 Belongs to the ClpA ClpB family K03695,K03696 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001025 457.0
BYD3_k127_8092629_4 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006847 354.0
BYD3_k127_8092629_5 Elongator protein 3, MiaB family, Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000006009 268.0
BYD3_k127_8092629_6 Mur ligase middle domain K11754 - 6.3.2.12,6.3.2.17 0.0000000000000000000000000000000000000000000000000000000000000000000003233 255.0
BYD3_k127_8092629_7 Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose K15856 - 1.1.1.281 0.0000000000000000000000000000000000000000000000000000000000000000001828 240.0
BYD3_k127_8092629_8 Deoxynucleoside kinase K15518 - 2.7.1.113 0.0000000000000000000000000000000000000000000000000000000000001119 219.0
BYD3_k127_8092629_9 Organic solvent tolerance protein K04744 - - 0.00000000000000000000000000000000000001661 166.0
BYD3_k127_8119122_0 Tetratricopeptide repeat K08884,K12132 - 2.7.11.1 2.832e-260 830.0
BYD3_k127_8119122_1 Bacterial regulatory protein, Fis family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002087 459.0
BYD3_k127_8119122_10 cheY-homologous receiver domain - - - 0.0000000000000000000000000001449 122.0
BYD3_k127_8119122_11 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000003048 111.0
BYD3_k127_8119122_12 - - - - 0.000000000000000000005031 106.0
BYD3_k127_8119122_13 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K01991 - - 0.00000000000000000009649 95.0
BYD3_k127_8119122_14 His Kinase A (phosphoacceptor) domain K07636 - 2.7.13.3 0.000000000000000002235 94.0
BYD3_k127_8119122_15 DoxX-like family - - - 0.000000000000001054 85.0
BYD3_k127_8119122_16 - - - - 0.000000000000003501 87.0
BYD3_k127_8119122_17 Beta/gamma crystallins - - - 0.000064 54.0
BYD3_k127_8119122_18 response regulator, receiver K13069,K18967 GO:0003674,GO:0003824,GO:0016740,GO:0016772,GO:0016779,GO:0052621 2.7.7.65 0.00007461 51.0
BYD3_k127_8119122_19 TIGRFAM PEP-CTERM system associated protein - - - 0.0001223 54.0
BYD3_k127_8119122_2 Bacterial regulatory protein, Fis family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002358 447.0
BYD3_k127_8119122_3 PFAM amidohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000061 417.0
BYD3_k127_8119122_4 Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide K07147 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002176 394.0
BYD3_k127_8119122_5 PFAM Type II secretion system protein E K02652 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002083 394.0
BYD3_k127_8119122_6 ECF sigma factor - - - 0.00000000000000000000000000000000000000000000000000000004862 202.0
BYD3_k127_8119122_7 Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain K17247 - - 0.000000000000000000000000000000000000000000000000001411 198.0
BYD3_k127_8119122_8 CHRD domain - - - 0.00000000000000000000000000000000000000000893 162.0
BYD3_k127_8119122_9 - - - - 0.00000000000000000000000000000003018 137.0
BYD3_k127_8125663_0 ASPIC and UnbV - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006014 495.0
BYD3_k127_8125663_1 Carboxypeptidase regulatory-like domain - - - 0.000000000000000001753 94.0
BYD3_k127_8125824_0 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001578 574.0
BYD3_k127_8125824_1 HELICc2 K03722 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003208 546.0
BYD3_k127_8125824_2 5TM C-terminal transporter carbon starvation CstA K06200 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003376 452.0
BYD3_k127_8125824_3 PQQ-like domain K05889 - 1.1.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002495 433.0
BYD3_k127_8125824_4 Methyltransferase K06969 - 2.1.1.191 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009517 401.0
BYD3_k127_8125824_5 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.0000000000000000000000000000000000000000000000000000000000001082 221.0
BYD3_k127_8125824_6 PFAM Tetratricopeptide repeat - - - 0.00002728 55.0
BYD3_k127_8125824_7 Disulphide bond corrector protein DsbC - - - 0.0009346 50.0
BYD3_k127_8137749_0 response regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004658 523.0
BYD3_k127_8137749_1 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004118 360.0
BYD3_k127_8137749_2 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004372 368.0
BYD3_k127_8137749_3 HlyD family secretion protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001707 356.0
BYD3_k127_8137749_4 lipoprotein transporter activity K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008195 332.0
BYD3_k127_8159419_0 Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00163 - 1.2.4.1 0.0 1074.0
BYD3_k127_8159419_1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation K00382 - 1.8.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001422 611.0
BYD3_k127_8159419_2 The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) K00627 GO:0003674,GO:0003824,GO:0004742,GO:0005488,GO:0005504,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006084,GO:0006085,GO:0006086,GO:0006090,GO:0006139,GO:0006163,GO:0006164,GO:0006637,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008289,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016407,GO:0016417,GO:0016418,GO:0016740,GO:0016746,GO:0016747,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019752,GO:0030523,GO:0031405,GO:0031406,GO:0032787,GO:0032991,GO:0033293,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0035383,GO:0035384,GO:0036094,GO:0043167,GO:0043168,GO:0043177,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045254,GO:0046390,GO:0046483,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0055086,GO:0071616,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0097159,GO:0140096,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901681,GO:1902494,GO:1990204 2.3.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002383 468.0
BYD3_k127_8159419_3 Metallo-beta-lactamase superfamily K17837 - 3.5.2.6 0.000000000000000000000000000000000000000000000000000000000000000000002757 248.0
BYD3_k127_8164495_0 Belongs to the ClpA ClpB family K03696 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001145 448.0
BYD3_k127_8164495_1 Phosphate acyltransferases K01897 - 6.2.1.3 0.000000000000000000000000001444 119.0
BYD3_k127_8164495_2 AMP-binding enzyme C-terminal domain K01895 - 6.2.1.1 0.00000000000000000000009737 100.0
BYD3_k127_8173356_0 Peptidase, M16 K07263 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005068 431.0
BYD3_k127_8173356_1 Belongs to the LDH2 MDH2 oxidoreductase family K05884 - 1.1.1.337 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001202 400.0
BYD3_k127_8173356_11 A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit contributes ATPase, 3'-5' helicase, exonuclease activity and loads RecA onto ssDNA K03582 - 3.1.11.5 0.00000000000000000000000000000000000000000000000000000000000000005087 254.0
BYD3_k127_8173356_12 exonuclease activity K16899 - 3.6.4.12 0.000000000000000000000004618 120.0
BYD3_k127_8173356_13 - - - - 0.0000000000000000000008812 106.0
BYD3_k127_8173356_14 - - - - 0.0000000000000003481 91.0
BYD3_k127_8173356_15 - - - - 0.0000283 51.0
BYD3_k127_8173356_16 DinB family - - - 0.00008729 50.0
BYD3_k127_8173356_17 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.0001551 51.0
BYD3_k127_8173356_2 conserved protein UCP016719 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005946 400.0
BYD3_k127_8173356_3 Trehalose utilisation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000163 383.0
BYD3_k127_8173356_4 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002675 370.0
BYD3_k127_8173356_5 Belongs to the pyruvate kinase family K00873 GO:0001871,GO:0003674,GO:0003824,GO:0004743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006116,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009986,GO:0009987,GO:0016052,GO:0016053,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019674,GO:0019693,GO:0019752,GO:0030246,GO:0030247,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:2001065 2.7.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000142 364.0
BYD3_k127_8173356_6 Possible lysine decarboxylase K06966 - 3.2.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002003 336.0
BYD3_k127_8173356_7 PFAM Peptidase M16 inactive domain K07263 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008929 321.0
BYD3_k127_8173356_8 Asp-tRNAAsn Glu-tRNAGln amidotransferase A subunit K02433 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009737 317.0
BYD3_k127_8173356_9 thiolester hydrolase activity K01179,K06889,K10773,K15853 - 3.2.1.4,4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001151 310.0
BYD3_k127_8179736_0 mannose-ethanolamine phosphotransferase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002195 366.0
BYD3_k127_8179736_1 PFAM peptidase M48 Ste24p - - - 0.000000000000000000000000000000000000000000000000000000000000000059 244.0
BYD3_k127_8179736_2 signal peptide processing K03100 - 3.4.21.89 0.0000000000000000000000000000000000000001083 156.0
BYD3_k127_8179736_3 PFAM TonB-dependent Receptor Plug Domain - - - 0.0000000000000000000000000003039 134.0
BYD3_k127_8179736_4 helix_turn_helix multiple antibiotic resistance protein - - - 0.000000000000000000008401 96.0
BYD3_k127_8179736_5 PFAM Outer membrane protein (OmpH-like) K06142 - - 0.000003205 56.0
BYD3_k127_8179736_6 PFAM Tetratricopeptide repeat - - - 0.00007052 55.0
BYD3_k127_8179736_7 SnoaL-like domain - - - 0.0006493 49.0
BYD3_k127_8281918_0 ABC-type transport system involved in lipoprotein release permease component K02004 - - 3.155e-227 732.0
BYD3_k127_8281918_1 Succinyl-CoA ligase like flavodoxin domain - - - 3.948e-210 672.0
BYD3_k127_8281918_10 Phosphoribosyl transferase domain - - - 0.00000000000000000000000000000000000000002926 158.0
BYD3_k127_8281918_11 Belongs to the universal stress protein A family - - - 0.0000000000000000000000000000004802 133.0
BYD3_k127_8281918_12 Domain in cystathionine beta-synthase and other proteins. - - - 0.00000000000000000000624 102.0
BYD3_k127_8281918_13 Phosphoribosyl transferase domain - - - 0.0000002061 59.0
BYD3_k127_8281918_2 ABC1 family K03688 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006185 443.0
BYD3_k127_8281918_3 Efflux ABC transporter permease protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006527 365.0
BYD3_k127_8281918_4 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006214 346.0
BYD3_k127_8281918_5 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002043 334.0
BYD3_k127_8281918_6 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000009398 310.0
BYD3_k127_8281918_7 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005181 304.0
BYD3_k127_8281918_8 Metal cation transporter, ZIP family K07238 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001234 282.0
BYD3_k127_8281918_9 ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006401 281.0
BYD3_k127_8369743_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.0 1161.0
BYD3_k127_8369743_1 Zinc-binding dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000192 336.0
BYD3_k127_8369743_2 Outer membrane efflux protein - - - 0.0000000000003198 82.0
BYD3_k127_8421146_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K07303 - 1.3.99.16 1.56e-271 862.0
BYD3_k127_8421146_1 PFAM aminotransferase class-III K01845 - 5.4.3.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001978 498.0
BYD3_k127_8421146_10 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 - 2.5.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000002841 261.0
BYD3_k127_8421146_11 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.000000000000000000000000000000000000000000000000000000000000000000005318 245.0
BYD3_k127_8421146_12 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 0.000000000000000000000000000000000000000000000000000000000000000003734 229.0
BYD3_k127_8421146_13 PFAM blue (type 1) copper domain protein - - - 0.000000000000000000000000000000000000000000000000000000000001553 221.0
BYD3_k127_8421146_14 COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS CutS homologs K07302 - 1.3.99.16 0.00000000000000000000000000000000000000000000000000000000002635 209.0
BYD3_k127_8421146_15 Cytochrome oxidase assembly protein K02259 - - 0.00000000000000000000000000000000000000000000000000001051 204.0
BYD3_k127_8421146_16 PFAM ABC-2 type transporter K09690 - - 0.00000000000000000000000000000000000000000000000000005321 196.0
BYD3_k127_8421146_17 Phenazine biosynthesis-like protein K06998 - 5.3.3.17 0.0000000000000000000000000000000000000000000000000005531 198.0
BYD3_k127_8421146_18 - - - - 0.00000000000000000000000000000000000000002229 172.0
BYD3_k127_8421146_19 Protein of unknown function (DUF420) K08976 - - 0.00000000000000000000000000000000000000002618 158.0
BYD3_k127_8421146_2 Belongs to the ALAD family K01698 - 4.2.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001417 433.0
BYD3_k127_8421146_20 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.000000000000000000000000000000000000001309 159.0
BYD3_k127_8421146_21 Cytochrome C assembly protein - - - 0.000000000000000000000000000000000000004953 157.0
BYD3_k127_8421146_22 PFAM von Willebrand factor type A - - - 0.00000000000000000000000000000000000002963 158.0
BYD3_k127_8421146_23 ATP synthase B/B' CF(0) K02109 - - 0.00000000000000001043 89.0
BYD3_k127_8421146_24 Lysylphosphatidylglycerol synthase TM region - - - 0.0000000000000003183 90.0
BYD3_k127_8421146_25 decarboxylase K01607 - 4.1.1.44 0.0000000000000009987 85.0
BYD3_k127_8421146_26 Tfp pilus assembly protein FimV - - - 0.000000000000005126 85.0
BYD3_k127_8421146_27 von Willebrand factor, type A K07114 - - 0.000000000001132 80.0
BYD3_k127_8421146_28 Sulfatase K01565 - 3.10.1.1 0.00000000001453 78.0
BYD3_k127_8421146_29 - - - - 0.00000000005031 76.0
BYD3_k127_8421146_3 Belongs to the precorrin methyltransferase family K13542 - 2.1.1.107,4.2.1.75 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001418 438.0
BYD3_k127_8421146_30 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.000000003385 61.0
BYD3_k127_8421146_31 O-Antigen ligase - - - 0.000000004777 69.0
BYD3_k127_8421146_33 TonB dependent receptor K02014 - - 0.0004795 50.0
BYD3_k127_8421146_4 Methyltransferase type 11 K20444 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005486 395.0
BYD3_k127_8421146_5 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000436 348.0
BYD3_k127_8421146_6 Wzt C-terminal domain K09691 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002699 334.0
BYD3_k127_8421146_7 zinc metalloprotease K11749 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002016 314.0
BYD3_k127_8421146_8 PFAM peptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004016 288.0
BYD3_k127_8421146_9 glucose sorbosone - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000273 267.0
BYD3_k127_8451647_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00123 - 1.17.1.9 5.221e-300 953.0
BYD3_k127_8451647_1 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009174 476.0
BYD3_k127_8451647_2 histidine kinase A domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002213 441.0
BYD3_k127_8451647_3 4Fe-4S dicluster domain K00124 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000577 286.0
BYD3_k127_8451647_4 Ankyrin repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001166 257.0
BYD3_k127_8451647_5 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000004357 222.0
BYD3_k127_8451647_6 - - - - 0.000000000000000000000000000000000000000000003865 180.0
BYD3_k127_8451647_7 Polysulphide reductase, NrfD - - - 0.0000000000000000000000000001514 129.0
BYD3_k127_8451647_8 Necessary for formate dehydrogenase activity K02380 - - 0.0000000000000001459 94.0
BYD3_k127_8456434_0 Belongs to the UPF0753 family K09822 - - 4.813e-227 735.0
BYD3_k127_8456434_1 GMC oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006649 561.0
BYD3_k127_8456434_2 4Fe-4S single cluster domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007682 420.0
BYD3_k127_8456434_3 NADH ubiquinone oxidoreductase subunit 5 (chain L) K05577 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009978 357.0
BYD3_k127_8456434_4 PLD-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004467 299.0
BYD3_k127_8456434_5 inositol 2-dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000002132 233.0
BYD3_k127_8456434_6 NADH ubiquinone oxidoreductase subunit 4 (Chain M) K00342 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000002562 238.0
BYD3_k127_8456434_7 Stage II sporulation protein K06381 - - 0.0000000000000000000000000000003584 138.0
BYD3_k127_8456434_8 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain K11422 GO:0000228,GO:0000785,GO:0000790,GO:0000791,GO:0002244,GO:0002376,GO:0002520,GO:0002682,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005700,GO:0005737,GO:0005829,GO:0006325,GO:0006464,GO:0006479,GO:0006807,GO:0006996,GO:0007275,GO:0007568,GO:0008013,GO:0008134,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008340,GO:0008757,GO:0009987,GO:0010259,GO:0016043,GO:0016278,GO:0016279,GO:0016569,GO:0016570,GO:0016571,GO:0016604,GO:0016607,GO:0016740,GO:0016741,GO:0018022,GO:0018023,GO:0018024,GO:0018027,GO:0018193,GO:0018205,GO:0019538,GO:0030097,GO:0030154,GO:0031974,GO:0031981,GO:0032259,GO:0032501,GO:0032502,GO:0032991,GO:0033043,GO:0033044,GO:0034708,GO:0034968,GO:0035097,GO:0035327,GO:0036211,GO:0042054,GO:0042800,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044454,GO:0044464,GO:0044648,GO:0045595,GO:0045637,GO:0045652,GO:0048188,GO:0048513,GO:0048534,GO:0048731,GO:0048856,GO:0048869,GO:0050789,GO:0050793,GO:0050794,GO:0051128,GO:0051239,GO:0051276,GO:0051568,GO:0060290,GO:0065007,GO:0070013,GO:0071704,GO:0071840,GO:0080182,GO:0140096,GO:1901532,GO:1901564,GO:1902036,GO:1902275,GO:1902494,GO:1903706,GO:1990234,GO:2000026,GO:2000736 2.1.1.43 0.00000000000000000000001028 107.0
BYD3_k127_8456434_9 COG0346 Lactoylglutathione lyase and related lyases - - - 0.00000001094 67.0
BYD3_k127_8464879_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 7.355e-254 812.0
BYD3_k127_8464879_1 Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs K04094 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 2.1.1.74 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001183 484.0
BYD3_k127_8464879_10 thymidylate kinase K00943 GO:0003674,GO:0003824,GO:0004550,GO:0004798,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0006139,GO:0006165,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009165,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0034641,GO:0034654,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046939,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.4.9 0.0000000000000000000000004671 121.0
BYD3_k127_8464879_11 DNA-templated transcription, initiation K03088 - - 0.000000000000000000001492 98.0
BYD3_k127_8464879_12 This protein binds to 23S rRNA in the presence of protein L20 K02888 GO:0003674,GO:0003735,GO:0005198 - 0.000000000000000141 83.0
BYD3_k127_8464879_13 PFAM Tetratricopeptide repeat - - - 0.00001912 56.0
BYD3_k127_8464879_2 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001617 379.0
BYD3_k127_8464879_3 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005593 359.0
BYD3_k127_8464879_4 PFAM Response regulator receiver domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001486 273.0
BYD3_k127_8464879_5 DNA protecting protein DprA K04096 - - 0.0000000000000000000000000000000000000000000000000000000000000000000823 243.0
BYD3_k127_8464879_6 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.000000000000000000000000000000000002067 151.0
BYD3_k127_8464879_7 Belongs to the bacterial ribosomal protein bL27 family K02899 - - 0.000000000000000000000000000000004838 129.0
BYD3_k127_8464879_8 Phosphoribosyl transferase domain - - - 0.000000000000000000000000000002005 130.0
BYD3_k127_8464879_9 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.0000000000000000000000000003161 119.0
BYD3_k127_8475380_0 Radical SAM - - - 3.743e-263 816.0
BYD3_k127_8475380_1 Domain of unknown function (DUF362) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001699 291.0
BYD3_k127_8475380_2 Involved in the tonB-independent uptake of proteins K13669 - - 0.00000000000000000000000000581 125.0
BYD3_k127_8475380_3 PFAM Prenyltransferase squalene oxidase - - - 0.00000000000000000005693 101.0
BYD3_k127_8477586_0 DNA topological change K03168 - 5.99.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000002677 266.0
BYD3_k127_8477586_1 Ankyrin repeats (many copies) - - - 0.000000000000000000000000000000000000000000000002747 192.0
BYD3_k127_8477586_2 - K02172 - - 0.0000000000000000000000000000003102 133.0
BYD3_k127_8477586_3 Cupin 2, conserved barrel domain protein K11477 - - 0.000000000000000000000000005956 115.0
BYD3_k127_8477586_4 - K02172 - - 0.000000000000000000000000006108 122.0
BYD3_k127_8477586_6 - - - - 0.00000001819 61.0
BYD3_k127_8522363_0 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K01782,K07516 - 1.1.1.35,4.2.1.17,5.1.2.3 6.395e-209 672.0
BYD3_k127_8522363_1 PFAM AMP-dependent synthetase K12508 - 6.2.1.34 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003669 618.0
BYD3_k127_8522363_2 Peptidase family M28 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000346 421.0
BYD3_k127_8522363_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001408 353.0
BYD3_k127_8522363_4 Amidohydrolase K07045 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001859 355.0
BYD3_k127_8522363_5 Ankyrin repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002735 301.0
BYD3_k127_8522363_6 TIGRFAM HAD-superfamily hydrolase, subfamily IA, variant 3 K20866 - 3.1.3.10 0.00000000000000000000000000000000000000001409 160.0
BYD3_k127_8522363_7 regulation of response to stimulus - - - 0.00000009437 65.0
BYD3_k127_8525884_0 Formylmethanofuran dehydrogenase subunit A K00200 GO:0003674,GO:0003824,GO:0006730,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016810,GO:0044237,GO:0044281 1.2.7.12 2.111e-199 636.0
BYD3_k127_8525884_1 MacB-like periplasmic core domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001102 563.0
BYD3_k127_8525884_10 KR domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000186 246.0
BYD3_k127_8525884_11 nitroreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000003235 249.0
BYD3_k127_8525884_12 Peptidase C26 K01658 - 4.1.3.27 0.0000000000000000000000000000000000000000000000000000000000000000001407 237.0
BYD3_k127_8525884_13 ATP:dephospho-CoA triphosphoribosyl transferase K05966 - 2.4.2.52 0.0000000000000000000000000000000000000000000000000000000000000000006072 244.0
BYD3_k127_8525884_14 GHMP kinases N terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000293 238.0
BYD3_k127_8525884_15 Hydantoinase/oxoprolinase K07072 - 2.5.1.131 0.00000000000000000000000000000000000000000000000000000000002239 233.0
BYD3_k127_8525884_16 formylmethanofuran dehydrogenase activity K00202 GO:0006730,GO:0008150,GO:0008152,GO:0009987,GO:0044237,GO:0044281 1.2.7.12 0.0000000000000000000000000000000000000000000000000000000003135 213.0
BYD3_k127_8525884_17 AAA domain - - - 0.000000000000000000000000000000000000000000000000000001145 199.0
BYD3_k127_8525884_18 Peptidase M56, BlaR1 - - - 0.0000000000000000000000000000000000000000000000000000105 213.0
BYD3_k127_8525884_19 Aminotransferase K00826,K02619 - 2.6.1.42,4.1.3.38 0.000000000000000000000000000000000000000000000000001552 200.0
BYD3_k127_8525884_2 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 - 2.5.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002687 500.0
BYD3_k127_8525884_20 Pterin 4 alpha carbinolamine dehydratase K01724 - 4.2.1.96 0.0000000000000000000000000000000000000000000000001544 179.0
BYD3_k127_8525884_21 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000001616 175.0
BYD3_k127_8525884_22 negative regulation of transcription, DNA-templated - - - 0.0000000000000000000000000000000000000000000808 162.0
BYD3_k127_8525884_23 Protein of unknown function (DUF447) K09154 - - 0.00000000000000000000000000000000000000000676 168.0
BYD3_k127_8525884_24 Belongs to the HisA HisF family K01814 - 5.3.1.16 0.00000000000000000000000000000000000000133 169.0
BYD3_k127_8525884_25 COG0720 6-pyruvoyl-tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.00000000000000000000000000000000000001252 151.0
BYD3_k127_8525884_26 nitrite transmembrane transporter activity K08177 - - 0.0000000000000000000000000002713 117.0
BYD3_k127_8525884_27 PFAM aspartate glutamate uridylate kinase - - - 0.0000000000000000000000001959 124.0
BYD3_k127_8525884_28 Penicillinase repressor - - - 0.000000000000000000000000884 108.0
BYD3_k127_8525884_29 4-HFC-P synthase - - - 0.0000000000000000000001279 106.0
BYD3_k127_8525884_3 TIGRFAM VWFA-related Acidobacterial domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000326 477.0
BYD3_k127_8525884_30 - - - - 0.00000000000000000001776 100.0
BYD3_k127_8525884_4 Tannase and feruloyl esterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001078 434.0
BYD3_k127_8525884_5 Carboxypeptidase regulatory-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005758 447.0
BYD3_k127_8525884_6 Anthranilate synthase component I K01657,K01665 - 2.6.1.85,4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008444 420.0
BYD3_k127_8525884_7 Catalyzes the transfer of a formyl group from 5-formyl tetrahydromethanopterin (5-formyl-H(4)MPT) to methanofuran (MFR) so as to produce formylmethanofuran (formyl-MFR) and tetrahydromethanopterin (H(4)MPT) K00672 - 2.3.1.101 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001259 353.0
BYD3_k127_8525884_8 Catalyzes the hydrolysis of methenyl-H(4)MPT( ) to 5- formyl-H(4)MPT K01499 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0008152,GO:0009987,GO:0015947,GO:0016787,GO:0016810,GO:0016814,GO:0018759,GO:0019238,GO:0043446,GO:0044237,GO:0044424,GO:0044464,GO:0071704 3.5.4.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002705 318.0
BYD3_k127_8525884_9 Belongs to the RimK family K05827,K05844 - 6.3.2.43 0.00000000000000000000000000000000000000000000000000000000000000000000006842 253.0
BYD3_k127_8536007_0 MatE - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003374 560.0
BYD3_k127_8536007_1 arylsulfatase activity K01132 - 3.1.6.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002476 546.0
BYD3_k127_8536007_10 - - - - 0.00001575 55.0
BYD3_k127_8536007_11 Protein of unknown function (DUF1552) - - - 0.0006524 42.0
BYD3_k127_8536007_2 Belongs to the ompA family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007633 445.0
BYD3_k127_8536007_3 Carboxylesterase family K03929 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002636 392.0
BYD3_k127_8536007_4 - - - - 0.000000000000000000000000000000000000004913 159.0
BYD3_k127_8536007_5 - - - - 0.000000000000000000000000005074 117.0
BYD3_k127_8536007_7 Methyltransferase FkbM domain - - - 0.0000009654 59.0
BYD3_k127_8536007_8 COG0500 SAM-dependent methyltransferases - - - 0.000004676 56.0
BYD3_k127_8536007_9 serine threonine protein kinase K12132 - 2.7.11.1 0.00001126 58.0
BYD3_k127_8537271_0 topoisomerase K02469 - 5.99.1.3 8.688e-283 889.0
BYD3_k127_8537271_1 Mismatch repair ATPase (MutS family) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002646 502.0
BYD3_k127_8537271_2 Aminotransferase class I and II - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003457 388.0
BYD3_k127_8537271_3 NYN domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007597 302.0
BYD3_k127_8537271_4 Prolyl oligopeptidase family K06889 - - 0.00000000000000000000000000000000000000007674 161.0
BYD3_k127_8537271_5 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000002643 143.0
BYD3_k127_8537271_6 tryptophan 2,3-dioxygenase activity K00453 GO:0003674,GO:0003824,GO:0004833,GO:0005488,GO:0006082,GO:0006520,GO:0006568,GO:0006569,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009072,GO:0009074,GO:0009308,GO:0009310,GO:0009987,GO:0016043,GO:0016054,GO:0016491,GO:0016701,GO:0016702,GO:0019439,GO:0019441,GO:0019752,GO:0020037,GO:0022607,GO:0034641,GO:0042180,GO:0042402,GO:0042430,GO:0042436,GO:0042537,GO:0043436,GO:0043933,GO:0044085,GO:0044106,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0046218,GO:0046395,GO:0046483,GO:0046700,GO:0046906,GO:0048037,GO:0051213,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0070189,GO:0071704,GO:0071840,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 1.13.11.11 0.000000000000000000000000000002555 122.0
BYD3_k127_8537271_7 Peptidase family M1 domain - - - 0.00000000000000000000005796 112.0
BYD3_k127_8537271_8 Gram-negative bacterial TonB protein C-terminal - - - 0.00000000001941 74.0
BYD3_k127_8551072_0 Peptidoglycan-binding domain 1 protein - - - 0.0 1211.0
BYD3_k127_8551072_1 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695,K03696 - - 0.0 1062.0
BYD3_k127_8551072_10 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005286 589.0
BYD3_k127_8551072_11 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 GO:0000162,GO:0003674,GO:0003824,GO:0004834,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0040007,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.2.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008022 525.0
BYD3_k127_8551072_12 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003237 509.0
BYD3_k127_8551072_13 PA domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006968 514.0
BYD3_k127_8551072_14 Ftsk_gamma K03466 GO:0000920,GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006355,GO:0006950,GO:0006970,GO:0007059,GO:0008094,GO:0008150,GO:0009628,GO:0009651,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0015616,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019219,GO:0019222,GO:0031224,GO:0031226,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0033676,GO:0042221,GO:0042623,GO:0042802,GO:0043085,GO:0043565,GO:0044093,GO:0044425,GO:0044459,GO:0044464,GO:0045893,GO:0045935,GO:0046677,GO:0048518,GO:0048522,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0051301,GO:0051716,GO:0060255,GO:0065007,GO:0065009,GO:0070887,GO:0071236,GO:0071944,GO:0080090,GO:0097159,GO:0140097,GO:1901363,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007292 522.0
BYD3_k127_8551072_15 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007024 495.0
BYD3_k127_8551072_16 NeuB family K03856 - 2.5.1.54 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000431 458.0
BYD3_k127_8551072_17 Belongs to the DegT DnrJ EryC1 family K02805 - 2.6.1.59 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005316 454.0
BYD3_k127_8551072_18 PA domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005111 436.0
BYD3_k127_8551072_19 PFAM FAD linked oxidase domain protein K00104 - 1.1.3.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002524 439.0
BYD3_k127_8551072_2 Thiamine pyrophosphate protein TPP binding domain protein K01652 - 2.2.1.6 3.894e-282 876.0
BYD3_k127_8551072_20 Belongs to the peptidase S8 family K01387 - 3.4.24.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001542 419.0
BYD3_k127_8551072_21 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001908 401.0
BYD3_k127_8551072_22 Ethanolamine ammonia lyase large subunit (EutB) K03735 - 4.3.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001099 391.0
BYD3_k127_8551072_23 PFAM glycosyl transferase family 51 K05366 - 2.4.1.129,3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002685 385.0
BYD3_k127_8551072_24 PFAM Glycosyl transferase family 2 K10012 - 2.4.2.53 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002046 362.0
BYD3_k127_8551072_25 AAA domain (dynein-related subfamily) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001246 353.0
BYD3_k127_8551072_26 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766 - 2.4.2.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006677 353.0
BYD3_k127_8551072_27 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - GO:0003674,GO:0003824,GO:0004601,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0008379,GO:0009636,GO:0009987,GO:0010035,GO:0010038,GO:0016209,GO:0016491,GO:0016684,GO:0019725,GO:0033554,GO:0034599,GO:0042221,GO:0042592,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464,GO:0045454,GO:0046686,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0051920,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1990748 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002227 331.0
BYD3_k127_8551072_28 VWA domain containing CoxE-like protein K07161 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001529 337.0
BYD3_k127_8551072_29 Aminotransferase K00812,K22457 GO:0003674,GO:0003824,GO:0008483,GO:0016740,GO:0016769,GO:0047297 2.6.1.1,2.6.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001467 335.0
BYD3_k127_8551072_3 AMP-binding enzyme C-terminal domain K01895 - 6.2.1.1 5.717e-271 847.0
BYD3_k127_8551072_30 DnaJ molecular chaperone homology domain K05516 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001166 320.0
BYD3_k127_8551072_31 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001514 313.0
BYD3_k127_8551072_32 Crp-like helix-turn-helix domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000007588 265.0
BYD3_k127_8551072_33 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000001638 265.0
BYD3_k127_8551072_34 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 - 3.4.21.88 0.000000000000000000000000000000000000000000000000000000000000000000000000001194 259.0
BYD3_k127_8551072_35 Peptidase C26 K01658 - 4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000002583 261.0
BYD3_k127_8551072_36 Ami_3 K01448 - 3.5.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000000001798 270.0
BYD3_k127_8551072_37 [2Fe-2S] binding domain K03518 - 1.2.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000003852 247.0
BYD3_k127_8551072_38 CO dehydrogenase flavoprotein C-terminal domain K03519 - 1.2.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000004045 251.0
BYD3_k127_8551072_39 domain, Protein K15125 - - 0.000000000000000000000000000000000000000000000000000000000000000001126 260.0
BYD3_k127_8551072_4 Belongs to the IlvD Edd family K01687 - 4.2.1.9 3.331e-260 814.0
BYD3_k127_8551072_40 response regulator K02481 - - 0.000000000000000000000000000000000000000000000000000000000000000008115 245.0
BYD3_k127_8551072_41 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis K00759 - 2.4.2.7 0.000000000000000000000000000000000000000000000000000000000000002567 221.0
BYD3_k127_8551072_42 Shikimate dehydrogenase substrate binding domain K13832 - 1.1.1.25,4.2.1.10 0.0000000000000000000000000000000000000000000000000000000000006102 231.0
BYD3_k127_8551072_43 Indole-3-glycerol phosphate synthase K01609 GO:0000162,GO:0000287,GO:0003674,GO:0003824,GO:0004425,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016020,GO:0016053,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019752,GO:0030312,GO:0034641,GO:0040007,GO:0042401,GO:0042430,GO:0042435,GO:0043167,GO:0043169,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044464,GO:0046219,GO:0046391,GO:0046394,GO:0046483,GO:0046872,GO:0071704,GO:0071944,GO:1901135,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.1.1.48 0.0000000000000000000000000000000000000000000000000000000000008644 224.0
BYD3_k127_8551072_44 Sigma-70, region 4 K03088 - - 0.000000000000000000000000000000000000000000000000000000000001143 218.0
BYD3_k127_8551072_45 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0030312,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:0140097,GO:1901360,GO:1901363 4.2.99.18 0.00000000000000000000000000000000000000000000000000000000003095 216.0
BYD3_k127_8551072_46 Peptidase family M48 - - - 0.00000000000000000000000000000000000000000000000000000000626 216.0
BYD3_k127_8551072_47 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.00000000000000000000000000000000000000000000000000000004838 200.0
BYD3_k127_8551072_48 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.000000000000000000000000000000000000000000000000000002633 200.0
BYD3_k127_8551072_49 Acetolactate synthase, small subunit K01653 - 2.2.1.6 0.00000000000000000000000000000000000000000000000000002986 194.0
BYD3_k127_8551072_5 Aldehyde oxidase and xanthine dehydrogenase, a b hammerhead domain K03520 - 1.2.5.3 8.26e-236 763.0
BYD3_k127_8551072_50 Belongs to the TrpF family K01817 - 5.3.1.24 0.000000000000000000000000000000000000000000000002074 181.0
BYD3_k127_8551072_51 Prephenate dehydrogenase K04517 - 1.3.1.12 0.000000000000000000000000000000000000000000001317 175.0
BYD3_k127_8551072_52 PFAM Integral membrane protein TerC - - - 0.0000000000000000000000000000000000000000003429 167.0
BYD3_k127_8551072_53 D-alanyl-D-alanine carboxypeptidase K07260 - 3.4.17.14 0.0000000000000000000000000000000000000000007694 181.0
BYD3_k127_8551072_54 acetyltransferase - - - 0.000000000000000000000000000000000000000001444 168.0
BYD3_k127_8551072_55 Lysin motif K19223 - - 0.00000000000000000000000000000005959 145.0
BYD3_k127_8551072_56 Conserved hypothetical protein 95 K08316 - 2.1.1.171 0.0000000000000000000000000000005246 128.0
BYD3_k127_8551072_57 Polyketide cyclase / dehydrase and lipid transport K09386 - - 0.000000000000000000000000000006051 123.0
BYD3_k127_8551072_58 Methyltransferase domain - - - 0.00000000000000000000000000004965 134.0
BYD3_k127_8551072_59 Beta-lactamase - - - 0.00000000000000000000000000031 130.0
BYD3_k127_8551072_6 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 1.733e-224 712.0
BYD3_k127_8551072_60 Zincin-like metallopeptidase K00930 - 2.7.2.8 0.0000000000000000000000000005946 119.0
BYD3_k127_8551072_61 PFAM RNP-1 like RNA-binding protein - - - 0.0000000000000000000000000007807 118.0
BYD3_k127_8551072_62 CoA-binding protein K06929 - - 0.000000000000000000000000001232 116.0
BYD3_k127_8551072_63 BON domain - - - 0.000000000000000000000001496 113.0
BYD3_k127_8551072_64 helix_turn_helix, mercury resistance K13640 - - 0.0000000000000000000001574 100.0
BYD3_k127_8551072_65 Belongs to the acylphosphatase family K01512 GO:0003674,GO:0003824,GO:0003998,GO:0016787,GO:0016817,GO:0016818 3.6.1.7 0.000000000000000000008563 94.0
BYD3_k127_8551072_66 Cupin domain - - - 0.00000000000000000002652 96.0
BYD3_k127_8551072_67 Tetratricopeptide repeat - - - 0.00000000000000000008893 104.0
BYD3_k127_8551072_68 Tetratricopeptide repeat - - - 0.0000000000000000003417 102.0
BYD3_k127_8551072_69 Chorismate mutase type II K03856,K04092,K04093,K04516,K13853 - 2.5.1.54,5.4.99.5 0.000000000000000003157 92.0
BYD3_k127_8551072_7 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 7.939e-198 638.0
BYD3_k127_8551072_70 PFAM Iron sulphur-containing domain, CDGSH-type - - - 0.000000000000000005501 85.0
BYD3_k127_8551072_71 COG0457 FOG TPR repeat - - - 0.00000000000000006337 94.0
BYD3_k127_8551072_72 Peptidase M15 K01185,K02395,K11066,K12287 - 3.2.1.17,3.5.1.28 0.000000000008668 79.0
BYD3_k127_8551072_73 Belongs to the phycobilisome linker protein family K02096 GO:0005575,GO:0005622,GO:0005623,GO:0009579,GO:0016020,GO:0034357,GO:0042651,GO:0044424,GO:0044436,GO:0044464 - 0.0000000006011 71.0
BYD3_k127_8551072_75 D-alanyl-D-alanine carboxypeptidase - - - 0.000000003764 70.0
BYD3_k127_8551072_76 Protein conserved in bacteria - - - 0.00000002894 68.0
BYD3_k127_8551072_77 Uncharacterized protein conserved in bacteria (DUF2272) - - - 0.00000003424 64.0
BYD3_k127_8551072_79 Domain of unknown function (DUF4390) - - - 0.00000005847 62.0
BYD3_k127_8551072_8 Protein tyrosine kinase K12132 - 2.7.11.1 5.404e-194 645.0
BYD3_k127_8551072_81 Uncharacterized protein conserved in bacteria (DUF2272) - - - 0.000009694 57.0
BYD3_k127_8551072_82 Domain of unknown function (DUF4157) - - - 0.0001968 54.0
BYD3_k127_8551072_84 Tellurite resistance protein TerB K05801 - - 0.0008862 50.0
BYD3_k127_8551072_9 An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay K12574 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006145 575.0
BYD3_k127_8584855_0 TonB-dependent receptor - - - 0.0 1437.0
BYD3_k127_8584855_1 DNA topological change K03168 - 5.99.1.2 1.269e-222 718.0
BYD3_k127_8584855_10 - - - - 0.000000000000000002248 93.0
BYD3_k127_8584855_11 Tetratricopeptide repeat - - - 0.0000000003481 71.0
BYD3_k127_8584855_12 Extracellular solute-binding protein, family 5 K02035 - - 0.00000001596 67.0
BYD3_k127_8584855_2 von Willebrand factor, type A K07114 - - 3.492e-216 691.0
BYD3_k127_8584855_3 transmembrane transport - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007954 455.0
BYD3_k127_8584855_4 COGs COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains K02481,K13599 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002373 343.0
BYD3_k127_8584855_5 long-chain fatty acid transporting porin activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002449 331.0
BYD3_k127_8584855_6 Carboxymuconolactone decarboxylase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000009056 241.0
BYD3_k127_8584855_7 Carboxymuconolactone decarboxylase family - - - 0.00000000000000000000000000000000000000000001255 166.0
BYD3_k127_8584855_8 Histidine kinase K13598 - 2.7.13.3 0.000000000000000000000000000000000000000009172 173.0
BYD3_k127_8584855_9 spectrin binding - - - 0.0000000000000000001996 103.0
BYD3_k127_8614889_0 DeoC/LacD family aldolase K11645 GO:0003674,GO:0003824,GO:0004332,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016829,GO:0016830,GO:0016832,GO:0042802,GO:0044424,GO:0044444,GO:0044464 4.1.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003159 532.0
BYD3_k127_8614889_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000373 392.0
BYD3_k127_8614889_10 NUDIX domain K03574,K03575 - 3.6.1.55 0.000000000000000000000000002357 119.0
BYD3_k127_8614889_2 tRNA thio-modification K03151 GO:0000049,GO:0002937,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0017144,GO:0018130,GO:0019438,GO:0034227,GO:0034470,GO:0034641,GO:0034660,GO:0042364,GO:0042723,GO:0042724,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:0090304,GO:0097159,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.8.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006468 383.0
BYD3_k127_8614889_3 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002482 338.0
BYD3_k127_8614889_4 FES K03575 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006466 286.0
BYD3_k127_8614889_5 phosphatidylcholine synthase K01004 - 2.7.8.24 0.0000000000000000000000000000000000000000000000000000000001794 212.0
BYD3_k127_8614889_6 GDP-mannose mannosyl hydrolase activity K01515 - 3.6.1.13 0.00000000000000000000000000000000000000000000000000001332 194.0
BYD3_k127_8614889_7 ATP cob(I)alamin adenosyltransferase K00798 - 2.5.1.17 0.0000000000000000000000000000000000000000000000000002118 192.0
BYD3_k127_8614889_8 peptide deformylase activity K01462 GO:0003674,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016810,GO:0016811,GO:0018193,GO:0018206,GO:0019538,GO:0031365,GO:0036211,GO:0042586,GO:0043170,GO:0043412,GO:0043686,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:1901564 3.5.1.88 0.0000000000000000000000000000000000000000000003438 173.0
BYD3_k127_8614889_9 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000008615 134.0
BYD3_k127_8657096_0 Amino acid kinase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001383 517.0
BYD3_k127_8657096_1 PFAM Chlorite dismutase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001043 266.0
BYD3_k127_8657096_2 LamB/YcsF family K07160 - - 0.00000000000000000000000000000000000000000000000000000000000000008232 228.0
BYD3_k127_8657096_3 Histone methylation protein DOT1 - - - 0.0000000000000000000000000000000000000000000000000000000008832 207.0
BYD3_k127_8657096_4 high-affinity ferrous iron transmembrane transporter activity K07243 - - 0.00000000000000000000000000000000000000000000000001564 189.0
BYD3_k127_8657096_5 AcrB/AcrD/AcrF family K03296 - - 0.0000000000000000000000000000000000000000000007025 168.0
BYD3_k127_8657096_6 Membrane - - - 0.0000000000000000000000000000000000000000004007 174.0
BYD3_k127_8657096_7 redox protein regulator of disulfide bond formation K07397 - - 0.0000000000000000156 87.0
BYD3_k127_8657096_8 DNA-sulfur modification-associated - - - 0.00000000000000005255 93.0
BYD3_k127_8657096_9 Helix-turn-helix domain K15539 - - 0.00000008882 61.0
BYD3_k127_869781_0 Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg- protoporphyrin IX K03405 - 6.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000805 604.0
BYD3_k127_869781_1 von Willebrand factor (vWF) type A domain K07114 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004971 512.0
BYD3_k127_869781_2 Mo-co oxidoreductase dimerisation domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006663 400.0
BYD3_k127_869781_3 glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.000000000000000000000000000000000000000000000000311 186.0
BYD3_k127_869781_4 - - - - 0.0008917 49.0
BYD3_k127_8804085_0 Belongs to the glycosyl hydrolase 13 family K07214 - - 0.000000000000000000000000000000000000000000000000000000009887 214.0
BYD3_k127_8804085_1 - - - - 0.000000000000000000000000000000000000000000003262 177.0
BYD3_k127_8804085_2 - - - - 0.00000000000000000000000000000000000000002455 156.0
BYD3_k127_8804085_3 cell septum assembly - - - 0.000000000003264 72.0
BYD3_k127_8828832_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 6.557e-308 963.0
BYD3_k127_8828832_1 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 6.774e-288 923.0
BYD3_k127_8828832_10 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006983 482.0
BYD3_k127_8828832_11 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00639 GO:0003674,GO:0003824,GO:0005488,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008710,GO:0008890,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009987,GO:0016053,GO:0016407,GO:0016408,GO:0016453,GO:0016740,GO:0016746,GO:0016747,GO:0017144,GO:0018130,GO:0019752,GO:0019842,GO:0030170,GO:0032787,GO:0034641,GO:0036094,GO:0042364,GO:0043167,GO:0043168,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0070279,GO:0071704,GO:0072330,GO:0097159,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.3.1.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004425 475.0
BYD3_k127_8828832_12 Beta-Casp domain K07576 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000228 473.0
BYD3_k127_8828832_13 Bacterial regulatory protein, Fis family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002479 453.0
BYD3_k127_8828832_14 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine K00831 GO:0003674,GO:0003824,GO:0004648,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006563,GO:0006564,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.6.1.52 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000557 443.0
BYD3_k127_8828832_15 Sigma factor PP2C-like phosphatases K07315 - 3.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004631 427.0
BYD3_k127_8828832_16 Protein of unknown function (DUF1015) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007319 391.0
BYD3_k127_8828832_17 phosphoglycerate mutase activity K01834 GO:0003674,GO:0003824,GO:0004619,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006109,GO:0006139,GO:0006140,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009894,GO:0009987,GO:0010675,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016866,GO:0016868,GO:0017144,GO:0018130,GO:0019219,GO:0019220,GO:0019222,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0031323,GO:0031329,GO:0032787,GO:0034248,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0043455,GO:0043456,GO:0043470,GO:0043471,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046538,GO:0046700,GO:0046939,GO:0050789,GO:0050794,GO:0051171,GO:0051174,GO:0051186,GO:0051188,GO:0051193,GO:0051196,GO:0055086,GO:0060255,GO:0062012,GO:0065007,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0080090,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1902031 5.4.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002886 376.0
BYD3_k127_8828832_18 PFAM aminotransferase, class I and II - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005327 370.0
BYD3_k127_8828832_19 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006442 377.0
BYD3_k127_8828832_2 Belongs to the class-I aminoacyl-tRNA synthetase family K01874 - 6.1.1.10 8.135e-281 875.0
BYD3_k127_8828832_20 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001397 343.0
BYD3_k127_8828832_21 Belongs to the ABC transporter superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003193 337.0
BYD3_k127_8828832_22 PFAM Aminotransferase class I and II - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006413 341.0
BYD3_k127_8828832_23 RmuC family K09760 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009315 337.0
BYD3_k127_8828832_24 Belongs to the ABC transporter superfamily K02031,K02032,K15583 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007711 325.0
BYD3_k127_8828832_25 ATP synthesis coupled electron transport K00336 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003403 331.0
BYD3_k127_8828832_26 histidine kinase A domain protein K02482 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003241 286.0
BYD3_k127_8828832_27 Cytochrome C biogenesis protein transmembrane region K06196,K12267 - 1.8.4.11,1.8.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000001674 270.0
BYD3_k127_8828832_28 Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control K00970,K00974 - 2.7.7.19,2.7.7.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000003014 282.0
BYD3_k127_8828832_29 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001165 271.0
BYD3_k127_8828832_3 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 5.959e-222 718.0
BYD3_k127_8828832_30 Predicted membrane protein (DUF2231) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000124 255.0
BYD3_k127_8828832_31 Zinc transporter K16267 - - 0.000000000000000000000000000000000000000000000000000000000000000001352 234.0
BYD3_k127_8828832_32 aminopeptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000003251 256.0
BYD3_k127_8828832_33 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate K03271 - 5.3.1.28 0.00000000000000000000000000000000000000000000000000005331 194.0
BYD3_k127_8828832_34 phosphoserine phosphatase activity K07315 - 3.1.3.3 0.0000000000000000000000000000000000000000000000000271 194.0
BYD3_k127_8828832_35 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose - - - 0.00000000000000000000000000000000000000000000001316 175.0
BYD3_k127_8828832_36 Enoyl-(Acyl carrier protein) reductase K03793 - 1.5.1.33 0.00000000000000000000000000000000000000000002736 173.0
BYD3_k127_8828832_37 diguanylate cyclase - - - 0.00000000000000000000000000000000000004722 158.0
BYD3_k127_8828832_38 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 - - 0.00000000000000000000000000000000003327 138.0
BYD3_k127_8828832_39 AI-2E family transporter K03548 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008150,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944 - 0.00000000000000000000000000000000004961 147.0
BYD3_k127_8828832_4 Methylmalonyl-CoA mutase K01848 - 5.4.99.2 9.829e-208 658.0
BYD3_k127_8828832_40 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes K02405 - - 0.0000000000000000000000000000000001458 145.0
BYD3_k127_8828832_41 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 - 4.2.1.59 0.0000000000000000000000000000000001836 137.0
BYD3_k127_8828832_42 Belongs to the ompA family - - - 0.00000000000000000000000000002335 128.0
BYD3_k127_8828832_43 PDZ DHR GLGF domain protein - - - 0.000000000000000000000000006626 123.0
BYD3_k127_8828832_44 23S rRNA-intervening sequence protein - - - 0.000000000000000000000000008727 114.0
BYD3_k127_8828832_45 Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation K03771 - 5.2.1.8 0.00000000000000000000000004026 121.0
BYD3_k127_8828832_46 PFAM von Willebrand factor type A - - - 0.000000000000000000000003937 116.0
BYD3_k127_8828832_47 Protein of unknown function with PCYCGC motif - - - 0.00000000000000000000004338 106.0
BYD3_k127_8828832_48 - - - - 0.0000000000000000000001653 102.0
BYD3_k127_8828832_49 BON domain - - - 0.0000000000000000000002043 105.0
BYD3_k127_8828832_5 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 3.53e-200 627.0
BYD3_k127_8828832_50 Gram-negative bacterial TonB protein C-terminal K03832 - - 0.000000000000000171 93.0
BYD3_k127_8828832_51 PAP2 superfamily - - - 0.00000000000004083 81.0
BYD3_k127_8828832_52 von Willebrand factor, type A K07114 - - 0.00000000000008178 82.0
BYD3_k127_8828832_53 Acetyltransferase (GNAT) family K01246 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008080,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0044424,GO:0044464 3.2.2.20 0.000000000003501 78.0
BYD3_k127_8828832_54 - - - - 0.000000000004622 69.0
BYD3_k127_8828832_55 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.00000000002552 71.0
BYD3_k127_8828832_56 EamA-like transporter family - - - 0.00000001657 64.0
BYD3_k127_8828832_57 Peptidase M56 - - - 0.000006163 58.0
BYD3_k127_8828832_58 EamA-like transporter family - - - 0.0000132 56.0
BYD3_k127_8828832_59 Stress responsive A/B Barrel Domain - - - 0.0000139 52.0
BYD3_k127_8828832_6 Myo-inositol-1-phosphate synthase K01858 - 5.5.1.4 1.148e-196 621.0
BYD3_k127_8828832_60 - - - - 0.0000148 54.0
BYD3_k127_8828832_61 - - - - 0.0001056 49.0
BYD3_k127_8828832_62 Carboxypeptidase regulatory-like domain - - - 0.0001451 55.0
BYD3_k127_8828832_63 Methylase involved in ubiquinone menaquinone biosynthesis - - - 0.0004987 51.0
BYD3_k127_8828832_7 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003641 552.0
BYD3_k127_8828832_8 Enolase, C-terminal TIM barrel domain K01689 - 4.2.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001193 529.0
BYD3_k127_8828832_9 4-alpha-glucanotransferase K00705 - 2.4.1.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006111 520.0
BYD3_k127_8894545_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 1.974e-301 944.0
BYD3_k127_8946278_0 Dehydrogenase K00117 - 1.1.5.2 8.195e-231 731.0
BYD3_k127_8946278_1 PQQ-like domain K17760 - 1.1.9.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005024 486.0
BYD3_k127_8946278_3 2OG-Fe(II) oxygenase superfamily - - - 0.0000000000000000000000000000000000000000000000000008403 194.0
BYD3_k127_8946278_4 NHL repeat - - - 0.000000000000000000000000000000000001688 156.0
BYD3_k127_8946278_5 NIPSNAP - - - 0.000000000006771 73.0
BYD3_k127_8971877_0 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001026 311.0
BYD3_k127_8971877_1 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 0.000000000000000000000000000000000000000000000000000000000000000000000002257 257.0
BYD3_k127_8971877_10 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.0000004287 56.0
BYD3_k127_8971877_2 Protein of unknown function (DUF2400) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000006952 254.0
BYD3_k127_8971877_3 PFAM Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000002016 232.0
BYD3_k127_8971877_4 PFAM Glycosyl transferase, group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000001925 228.0
BYD3_k127_8971877_5 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 - 5.4.99.12 0.0000000000000000000000000000000000000000000000000000000000001153 220.0
BYD3_k127_8971877_6 Outer membrane efflux protein K12340 - - 0.000000000000000000000000000000000000000000000000000000000005796 228.0
BYD3_k127_8971877_7 orotate phosphoribosyltransferase activity K00762 - 2.4.2.10 0.00000000000000000000000000000000000000000000000000000000006858 211.0
BYD3_k127_8971877_8 PFAM phosphatidate cytidylyltransferase K00981 - 2.7.7.41 0.00000000000000000000000000000004701 135.0
BYD3_k127_8971877_9 - - - - 0.0000000002367 72.0
BYD3_k127_978291_0 DNA-directed DNA polymerase K02337 - 2.7.7.7 0.0 1124.0
BYD3_k127_978291_1 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 1.273e-195 623.0
BYD3_k127_978291_10 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 4.1.1.65 0.00000000000000000000000000000000000000000000000004437 190.0
BYD3_k127_978291_11 This enzyme acetylates the N-terminal alanine of ribosomal protein S18 K03789 - 2.3.1.128 0.0000000000000000000000000000000001161 141.0
BYD3_k127_978291_12 Glycoprotease family K01409,K14742 - 2.3.1.234 0.0000000000000000000000000107 121.0
BYD3_k127_978291_13 COG1520 FOG WD40-like repeat - - - 0.000000000000002235 89.0
BYD3_k127_978291_14 Transposase IS200 like - - - 0.00000000000315 79.0
BYD3_k127_978291_15 Protein of unknown function (DUF465) - - - 0.000002197 54.0
BYD3_k127_978291_2 MutS domain I K03555 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000263 499.0
BYD3_k127_978291_3 single-stranded-DNA-specific exonuclease RecJ K07462 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003378 460.0
BYD3_k127_978291_4 Sigma-54 factor, Activator interacting domain (AID) K03092 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002121 380.0
BYD3_k127_978291_5 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962,K01963 - 2.1.3.15,6.4.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001369 337.0
BYD3_k127_978291_6 lipopolysaccharide transport protein B ATP-binding component of ABC superfamily K01990,K06861 GO:0003674,GO:0003824,GO:0005215,GO:0005319,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006869,GO:0008150,GO:0010876,GO:0015221,GO:0015399,GO:0015405,GO:0015437,GO:0015920,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0031224,GO:0032991,GO:0033036,GO:0034040,GO:0042623,GO:0042626,GO:0043190,GO:0043492,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944,GO:0098533,GO:0098796,GO:0098797,GO:1901264,GO:1901505,GO:1902494,GO:1902495,GO:1904949,GO:1990351 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001749 325.0
BYD3_k127_978291_7 Alanine-glyoxylate amino-transferase K05825 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000369 309.0
BYD3_k127_978291_8 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.000000000000000000000000000000000000000000000000000000000001559 218.0
BYD3_k127_978291_9 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.00000000000000000000000000000000000000000000000000001136 218.0
BYD3_k127_981382_0 Carbohydrate family 9 binding domain-like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003415 565.0
BYD3_k127_981382_1 Peptidase, M61 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001889 500.0
BYD3_k127_981382_2 M61 glycyl aminopeptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003476 451.0
BYD3_k127_981382_3 Catalyzes the ferrous insertion into protoporphyrin IX K01772 GO:0003674,GO:0003824,GO:0004325,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.99.1.1,4.99.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004846 295.0
BYD3_k127_981382_4 Peptidase M56, BlaR1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000003118 251.0
BYD3_k127_981382_5 - - - - 0.00000000000000000000000000001309 124.0
BYD3_k127_981382_6 Penicillinase repressor - - - 0.0000000000000000000000004204 109.0
BYD3_k127_981382_7 - - - - 0.00000000000000005175 88.0
BYD3_k127_98860_0 belongs to the aldehyde dehydrogenase family K00135 GO:0000166,GO:0001505,GO:0003674,GO:0003824,GO:0004777,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006105,GO:0006520,GO:0006536,GO:0006538,GO:0006540,GO:0006807,GO:0008150,GO:0008152,GO:0009013,GO:0009056,GO:0009063,GO:0009064,GO:0009065,GO:0009448,GO:0009450,GO:0009987,GO:0016054,GO:0016491,GO:0016620,GO:0016903,GO:0017144,GO:0019752,GO:0032787,GO:0036094,GO:0042133,GO:0042135,GO:0043436,GO:0043648,GO:0043649,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044464,GO:0046395,GO:0048037,GO:0050662,GO:0051287,GO:0055114,GO:0065007,GO:0065008,GO:0071704,GO:0072329,GO:0097159,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 1.2.1.16,1.2.1.20,1.2.1.79 1.748e-245 766.0
BYD3_k127_98860_1 proline dipeptidase activity - - - 1.093e-204 646.0
BYD3_k127_98860_10 domain protein K14194 - - 0.00000000000003878 86.0
BYD3_k127_98860_11 protocatechuate 3,4-dioxygenase - - - 0.000001177 61.0
BYD3_k127_98860_12 PFAM S23 ribosomal protein - - - 0.000001734 56.0
BYD3_k127_98860_13 - - - - 0.000005779 59.0
BYD3_k127_98860_2 PFAM peptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004419 585.0
BYD3_k127_98860_3 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor K21417 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007678 480.0
BYD3_k127_98860_4 pyruvate dehydrogenase (acetyl-transferring) activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007772 291.0
BYD3_k127_98860_5 ATPases associated with a variety of cellular activities K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001072 287.0
BYD3_k127_98860_6 Catalytic domain of components of various dehydrogenase complexes K00627 - 2.3.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000025 297.0
BYD3_k127_98860_7 KR domain K00059 - 1.1.1.100 0.00000000000000000000000000000000000001375 154.0
BYD3_k127_98860_8 Transcriptional regulator K07979 - - 0.00000000000000000000000000000004047 128.0
BYD3_k127_98860_9 PFAM 6-phosphogluconate dehydrogenase NAD-binding K00020 - 1.1.1.31 0.00000000000000000000003707 100.0