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Overview

ID MAG00146
Name BYD3_bin.9
Sample SMP0003
Taxonomy
Kingdom Bacteria
Phylum ARS69
Class ARS69
Order ARS69
Family ARS69
Genus
Species
Assembly information
Completeness (%) 94.52
Contamination (%) 1.21
GC content (%) 63.0
N50 (bp) 6,817
Genome size (bp) 3,327,557

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes2874

Gene name Description KEGG GOs EC E-value Score Sequence
BYD3_k127_1011267_0 3-isopropylmalate dehydratase activity K01703,K01704,K01705 - 4.2.1.33,4.2.1.35,4.2.1.36 1.053e-201 651.0
BYD3_k127_1011267_1 Highly conserved protein containing a thioredoxin domain - - - 0.0000000000000000000000000000000000000000000000000000004938 205.0
BYD3_k127_1011267_2 Belongs to the transketolase family K00615 - 2.2.1.1 0.00000000000002765 75.0
BYD3_k127_1033802_0 Belongs to the FPP GGPP synthase family K00795,K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001506 290.0
BYD3_k127_1033802_1 PFAM Acid phosphatase vanadium-dependent haloperoxidase related K09775 - - 0.000000000000000000000000000000002563 136.0
BYD3_k127_1033802_2 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.00000000000000000000002447 106.0
BYD3_k127_1033802_3 exodeoxyribonuclease VII activity K03602 - 3.1.11.6 0.00000000000951 68.0
BYD3_k127_1045456_0 OmpA family - - - 0.00000000000006792 83.0
BYD3_k127_1045456_1 - - - - 0.00003188 55.0
BYD3_k127_1054741_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 1.042e-279 871.0
BYD3_k127_1072062_0 Peptidase family M28 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008193 432.0
BYD3_k127_1072062_1 Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps K04084 - 1.8.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006805 436.0
BYD3_k127_1072062_2 - - - - 0.0000000000000000000000000000000000000000000000000000001486 217.0
BYD3_k127_1072062_3 aminopeptidase activity - - - 0.00000000000000000000000000000000000000000000000001073 198.0
BYD3_k127_1072062_4 Domain of unknown function (DUF892) - - - 0.00000000000000000000000000000000000000000001063 169.0
BYD3_k127_1072062_5 - - - - 0.000000000003416 68.0
BYD3_k127_1087175_0 TamB, inner membrane protein subunit of TAM complex K09800 - - 0.0000000007452 72.0
BYD3_k127_1087850_0 Outer membrane protein beta-barrel family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006651 480.0
BYD3_k127_1087850_1 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 0.00000000000000000000000000000000000000000000000000001937 195.0
BYD3_k127_1087850_2 Extracellular solute-binding protein - - - 0.000000000000000000000000000000000000000000000000001271 205.0
BYD3_k127_1089671_0 methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003671 612.0
BYD3_k127_1089671_1 Participates in both transcription termination and antitermination K02600 GO:0001000,GO:0001121,GO:0001125,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006353,GO:0006355,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019899,GO:0019904,GO:0031323,GO:0031326,GO:0031554,GO:0031564,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0043175,GO:0043244,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050789,GO:0050794,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0070063,GO:0071704,GO:0080090,GO:0090304,GO:0097659,GO:1901360,GO:1901362,GO:1901576,GO:1903506,GO:2000112,GO:2001141 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003311 417.0
BYD3_k127_1089671_2 Permease YjgP YjgQ family protein K07091,K11720 GO:0003674,GO:0003824,GO:0005215,GO:0005319,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006869,GO:0008150,GO:0010876,GO:0015221,GO:0015399,GO:0015405,GO:0015437,GO:0015920,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0031224,GO:0032991,GO:0033036,GO:0034040,GO:0042623,GO:0042626,GO:0043190,GO:0043492,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944,GO:0098533,GO:0098796,GO:0098797,GO:1901264,GO:1901505,GO:1902494,GO:1902495,GO:1904949,GO:1990351 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002236 306.0
BYD3_k127_1089671_3 Permease YjgP YjgQ K11720 - - 0.00000000000000000000000000000000000000000000000000000000000002054 229.0
BYD3_k127_1089671_4 Peptidase M28 - - - 0.00000000000000000000000000000000000000000000000000000000000003855 227.0
BYD3_k127_1089671_5 Required for maturation of 30S ribosomal subunits K09748 GO:0000028,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000006889 91.0
BYD3_k127_109058_0 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 GO:0000270,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008963,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016020,GO:0016740,GO:0016772,GO:0016780,GO:0030203,GO:0034645,GO:0040007,GO:0042546,GO:0042802,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0044464,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:0071944,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 2.7.8.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002512 484.0
BYD3_k127_109058_1 Glycosyltransferase like family 2 K03606,K07011 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005497 444.0
BYD3_k127_109058_10 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000000000006067 124.0
BYD3_k127_109058_11 Belongs to the MraZ family K03925 - - 0.0000000000000000603 87.0
BYD3_k127_109058_12 4-amino-4-deoxy-L-arabinose transferase activity K14340 - - 0.000000000000002326 91.0
BYD3_k127_109058_13 Amidohydrolase K07045 - - 0.00000000000005526 81.0
BYD3_k127_109058_14 ABC transporter substrate-binding protein - - - 0.00000000001362 78.0
BYD3_k127_109058_15 Polysaccharide biosynthesis protein - - - 0.0000000008378 71.0
BYD3_k127_109058_2 acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003478 359.0
BYD3_k127_109058_3 Penicillin-binding Protein dimerisation domain K03587 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001258 361.0
BYD3_k127_109058_4 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001199 322.0
BYD3_k127_109058_5 transferase activity, transferring glycosyl groups K00721,K03820 - 2.4.1.83 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007412 289.0
BYD3_k127_109058_6 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 - 2.1.1.199 0.0000000000000000000000000000000000000000000000000000000000000000000000001843 259.0
BYD3_k127_109058_7 Mur ligase family, catalytic domain K01929 - 6.3.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000003863 259.0
BYD3_k127_109058_8 Glycosyltransferase like family 2 K00721 - 2.4.1.83 0.000000000000000000000000000000000000001495 152.0
BYD3_k127_109058_9 Belongs to the SEDS family K03588 - - 0.0000000000000000000000000000002228 132.0
BYD3_k127_1096024_0 Belongs to the CarB family K01955 - 6.3.5.5 0.0 1347.0
BYD3_k127_1096024_1 short-chain dehydrogenase reductase SDR - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006627 578.0
BYD3_k127_1096024_2 PFAM Carbamoyl-phosphate synthase small chain, CPSase domain K01956 - 6.3.5.5 0.000000000000000000000000000000000000000000000000000000000000000001106 231.0
BYD3_k127_1096024_3 Cysteine-rich CPXCG - - - 0.000000003827 59.0
BYD3_k127_1096024_4 COG0457 FOG TPR repeat - - - 0.000000686 59.0
BYD3_k127_1099906_0 xanthine dehydrogenase activity K04108 - 1.3.7.9 4.798e-212 695.0
BYD3_k127_1099906_1 Insulinase (Peptidase family M16) K07263 - - 7.632e-202 661.0
BYD3_k127_1099906_10 NHL repeat - - - 0.00000000001914 68.0
BYD3_k127_1099906_12 mercury ion transmembrane transporter activity K07213 - - 0.00000001684 66.0
BYD3_k127_1099906_13 Uracil DNA glycosylase superfamily K21929 - 3.2.2.27 0.00006537 55.0
BYD3_k127_1099906_14 PPIC-type PPIASE domain - - - 0.0001198 55.0
BYD3_k127_1099906_15 Belongs to the alkaline phosphatase family K01077 - 3.1.3.1 0.000607 52.0
BYD3_k127_1099906_2 type I phosphodiesterase nucleotide pyrophosphatase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000007008 275.0
BYD3_k127_1099906_3 CO dehydrogenase flavoprotein C-terminal domain K04109 - 1.3.7.9 0.0000000000000000000000000000000000000000000000000000000000006962 227.0
BYD3_k127_1099906_4 Sugar-specific transcriptional regulator TrmB K01534 - 3.6.3.3,3.6.3.5 0.00000000000000000000000000000000000000000000000000000001635 207.0
BYD3_k127_1099906_5 Dihydrodipicolinate reductase, N-terminus K21672 - 1.4.1.12,1.4.1.26 0.00000000000000000000000000000000000000000000000000000008034 224.0
BYD3_k127_1099906_6 Carbonic anhydrase K01673 - 4.2.1.1 0.000000000000000000000000000000000000000000000000007597 193.0
BYD3_k127_1099906_7 carbon monoxide dehydrogenase K03518 - 1.2.5.3 0.00000000000000000000000000000000000000000000004485 175.0
BYD3_k127_1099906_8 Aldo/keto reductase family - - - 0.0000000000000000000000000000000000000000000001115 172.0
BYD3_k127_1099906_9 TonB-dependent receptor - - - 0.000000000000000000000000000000000000000000009494 186.0
BYD3_k127_1102638_0 Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding K03520 - 1.2.5.3 0.0 1219.0
BYD3_k127_1102638_1 PFAM Pyridoxal-5'-phosphate-dependent protein beta subunit - - - 1.194e-200 636.0
BYD3_k127_1102638_2 Amidohydrolase family K12960 - 3.5.4.28,3.5.4.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002509 402.0
BYD3_k127_1102638_3 Pyridoxal-phosphate dependent enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006537 283.0
BYD3_k127_1125772_0 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002055 545.0
BYD3_k127_1125772_1 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005369 437.0
BYD3_k127_1125772_10 phytol kinase activity K16368 GO:0003674,GO:0003824,GO:0004143,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0006629,GO:0006644,GO:0006650,GO:0006654,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009987,GO:0012505,GO:0016020,GO:0016021,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019637,GO:0030176,GO:0031224,GO:0031227,GO:0031984,GO:0042175,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045017,GO:0046473,GO:0046474,GO:0046486,GO:0071704,GO:0090407,GO:0098827,GO:1901576 2.7.1.174 0.00000000005326 75.0
BYD3_k127_1125772_11 NHL repeat K12035 GO:0000003,GO:0000082,GO:0000278,GO:0000932,GO:0001708,GO:0001838,GO:0001841,GO:0001843,GO:0002009,GO:0002164,GO:0002165,GO:0002168,GO:0003006,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0004842,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005912,GO:0005924,GO:0005927,GO:0006139,GO:0006396,GO:0006401,GO:0006402,GO:0006417,GO:0006464,GO:0006725,GO:0006807,GO:0007049,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0007275,GO:0007276,GO:0007399,GO:0007517,GO:0007548,GO:0008150,GO:0008152,GO:0008283,GO:0008543,GO:0008544,GO:0009056,GO:0009057,GO:0009653,GO:0009719,GO:0009790,GO:0009791,GO:0009792,GO:0009888,GO:0009889,GO:0009890,GO:0009892,GO:0009893,GO:0009894,GO:0009896,GO:0009913,GO:0009957,GO:0009987,GO:0010033,GO:0010171,GO:0010172,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010586,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0010629,GO:0010720,GO:0014020,GO:0014070,GO:0016070,GO:0016071,GO:0016203,GO:0016331,GO:0016441,GO:0016458,GO:0016567,GO:0016740,GO:0017148,GO:0019219,GO:0019222,GO:0019439,GO:0019538,GO:0019787,GO:0019953,GO:0021915,GO:0022402,GO:0022407,GO:0022414,GO:0023052,GO:0030054,GO:0030055,GO:0030154,GO:0030155,GO:0030371,GO:0030674,GO:0030855,GO:0030856,GO:0031047,GO:0031050,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031329,GO:0031331,GO:0032268,GO:0032269,GO:0032446,GO:0032501,GO:0032502,GO:0032504,GO:0032991,GO:0033628,GO:0033632,GO:0034248,GO:0034249,GO:0034641,GO:0034655,GO:0034660,GO:0035148,GO:0035194,GO:0035195,GO:0035196,GO:0035198,GO:0035239,GO:0035278,GO:0035295,GO:0035770,GO:0036211,GO:0036464,GO:0040029,GO:0040033,GO:0040034,GO:0042127,GO:0042221,GO:0043009,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043331,GO:0043412,GO:0043487,GO:0043488,GO:0043900,GO:0043902,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044344,GO:0044424,GO:0044444,GO:0044464,GO:0044703,GO:0044706,GO:0044770,GO:0044772,GO:0044843,GO:0045138,GO:0045165,GO:0045182,GO:0045595,GO:0045597,GO:0045604,GO:0045682,GO:0045935,GO:0045974,GO:0046483,GO:0046661,GO:0046700,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048598,GO:0048609,GO:0048646,GO:0048729,GO:0048731,GO:0048856,GO:0048869,GO:0050779,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051094,GO:0051171,GO:0051172,GO:0051173,GO:0051239,GO:0051240,GO:0051246,GO:0051248,GO:0051252,GO:0051254,GO:0051704,GO:0051716,GO:0051865,GO:0060090,GO:0060147,GO:0060148,GO:0060255,GO:0060281,GO:0060282,GO:0060284,GO:0060378,GO:0060429,GO:0060538,GO:0060562,GO:0060606,GO:0060964,GO:0060966,GO:0060968,GO:0061013,GO:0061014,GO:0061061,GO:0061157,GO:0061158,GO:0061630,GO:0061659,GO:0061980,GO:0065007,GO:0065008,GO:0070161,GO:0070647,GO:0070848,GO:0070887,GO:0070918,GO:0071310,GO:0071359,GO:0071363,GO:0071407,GO:0071495,GO:0071704,GO:0071774,GO:0072089,GO:0072175,GO:0080090,GO:0090304,GO:0090598,GO:0090727,GO:0097159,GO:0140096,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901575,GO:1901698,GO:1901699,GO:1903047,GO:1903311,GO:1903313,GO:1905879,GO:1905881,GO:1990124,GO:1990904,GO:2000026,GO:2000112,GO:2000113,GO:2000177,GO:2000241,GO:2000243,GO:2000637 2.3.2.27 0.000000003234 70.0
BYD3_k127_1125772_12 Polysaccharide biosynthesis protein - - - 0.0000003128 63.0
BYD3_k127_1125772_2 Belongs to the peptidase M16 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001116 405.0
BYD3_k127_1125772_3 PFAM SAICAR synthetase K01923 GO:0003674,GO:0003824,GO:0004639,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002577 323.0
BYD3_k127_1125772_4 PFAM peptidase M16 domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006887 310.0
BYD3_k127_1125772_5 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.0000000000000000000000000000000000000000000000000000001523 212.0
BYD3_k127_1125772_6 DNA internalization-related competence protein ComEC Rec2 K02238 - - 0.00000000000000000000000000000000000000000000000000004096 212.0
BYD3_k127_1125772_7 Lytic transglycosylase catalytic K08309 - - 0.0000000000000000000000000000000000000003737 172.0
BYD3_k127_1125772_8 - - - - 0.0000000000000025 83.0
BYD3_k127_1125772_9 FlgD Ig-like domain - - - 0.00000000000002371 85.0
BYD3_k127_1143722_0 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710,K01784 - 4.2.1.46,5.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005024 299.0
BYD3_k127_1143722_1 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002408 299.0
BYD3_k127_1143722_2 Belongs to the DegT DnrJ EryC1 family K13010 - 2.6.1.102 0.00000000000000000000000000000000000000009083 172.0
BYD3_k127_116279_0 Formiminotransferase domain, N-terminal subdomain K00603,K13990 - 2.1.2.5,4.3.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002681 567.0
BYD3_k127_116279_1 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001353 441.0
BYD3_k127_116279_10 PFAM Radical SAM domain protein - - - 0.00000734 56.0
BYD3_k127_116279_11 cellulase activity K01195 - 3.2.1.31 0.0003462 53.0
BYD3_k127_116279_2 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001087 357.0
BYD3_k127_116279_3 Belongs to the peptidase S8 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007011 349.0
BYD3_k127_116279_4 Subtilase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002916 344.0
BYD3_k127_116279_5 Bacterial extracellular solute-binding proteins, family 5 Middle K13893 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006715 330.0
BYD3_k127_116279_6 phosphoserine phosphatase K02203 - 2.7.1.39,3.1.3.3 0.0000000000000000000000000000000000000000000359 167.0
BYD3_k127_116279_7 protein secretion - - - 0.00000000000005003 86.0
BYD3_k127_116279_8 lipolytic protein G-D-S-L family K18650 - 3.2.1.82 0.0000000000002857 81.0
BYD3_k127_116279_9 extracellular matrix structural constituent - - - 0.0000000000007289 83.0
BYD3_k127_1180562_0 Arylsulfatase a K01133 - 3.1.6.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001913 378.0
BYD3_k127_1180562_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 GO:0003674,GO:0003824,GO:0003954,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000001651 268.0
BYD3_k127_1180562_2 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000002373 123.0
BYD3_k127_1180562_3 oxidoreductase activity K07114 - - 0.0000000000000000000000000004576 117.0
BYD3_k127_1180562_4 AntiSigma factor - - - 0.00001325 57.0
BYD3_k127_1228629_0 response regulator K02481,K07713 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001114 422.0
BYD3_k127_1228629_1 PFAM Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002322 282.0
BYD3_k127_1228629_2 peptidase, M16 K07263 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004234 262.0
BYD3_k127_1228629_3 Peptidase M16 inactive domain K07263,K07623 - - 0.0000000000000000000000000000000000000000000000000005102 208.0
BYD3_k127_1228629_4 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.00000000000000000000000000000000000000000000006094 173.0
BYD3_k127_1228629_5 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes K03118 - - 0.0000000000000000000000000000005655 129.0
BYD3_k127_1238503_0 - - - - 0.00000000000000000000000000000000004596 142.0
BYD3_k127_1238503_1 Involved in DNA repair and RecF pathway recombination K03584 GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009295,GO:0009987,GO:0033554,GO:0034641,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043590,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:1901360 - 0.00000000000000000000004207 109.0
BYD3_k127_1238503_2 Amino acid permease - - - 0.000000000002844 67.0
BYD3_k127_1253389_0 Mo-molybdopterin cofactor metabolic process K03148,K03636,K21029,K21147 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006534,GO:0006535,GO:0006563,GO:0006732,GO:0006777,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008146,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009108,GO:0009605,GO:0009607,GO:0009987,GO:0016053,GO:0016740,GO:0016772,GO:0016779,GO:0016782,GO:0018130,GO:0019344,GO:0019538,GO:0019637,GO:0019720,GO:0019752,GO:0020012,GO:0030312,GO:0030682,GO:0042783,GO:0043170,GO:0043207,GO:0043436,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0044403,GO:0044413,GO:0044415,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0050896,GO:0051186,GO:0051188,GO:0051189,GO:0051701,GO:0051704,GO:0051707,GO:0051805,GO:0051807,GO:0051810,GO:0051832,GO:0051834,GO:0052173,GO:0052200,GO:0052564,GO:0052572,GO:0061605,GO:0070566,GO:0071704,GO:0071944,GO:0075136,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.7.73,2.7.7.80,2.8.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001192 580.0
BYD3_k127_1253389_1 JAB/MPN domain K21140 - 3.13.1.6 0.000000000000000000000000000000000001225 146.0
BYD3_k127_1253389_2 Iron-sulphur cluster biosynthesis - - - 0.000000001865 59.0
BYD3_k127_1274355_0 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K01431 - 3.5.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002909 435.0
BYD3_k127_1277359_0 Stage II sporulation protein E K07315 - 3.1.3.3 0.000000000000000000000000000000000000000000000005827 198.0
BYD3_k127_1277359_1 Histidine kinase - - - 0.000000000000000000000000000000002723 146.0
BYD3_k127_1277359_2 STAS domain - - - 0.00000000004471 70.0
BYD3_k127_1277359_3 long-chain fatty acid transporting porin activity - - - 0.0000001028 65.0
BYD3_k127_1277359_4 Pkd domain containing protein - - - 0.0000104 57.0
BYD3_k127_1291785_0 Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene K03664 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000000000000000000000000008939 178.0
BYD3_k127_1291785_1 PFAM cell wall hydrolase autolysin K01448 - 3.5.1.28 0.000000000000000000000000003203 128.0
BYD3_k127_1291785_2 -O-antigen - - - 0.000000000000000000001131 108.0
BYD3_k127_1305168_0 Probable RNA and SrmB- binding site of polymerase A K00970 - 2.7.7.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007658 432.0
BYD3_k127_1305168_1 tetraacyldisaccharide 4'-kinase activity K09791 - - 0.000703 42.0
BYD3_k127_1321004_0 Polysaccharide biosynthesis protein K01784,K08679 - 5.1.3.2,5.1.3.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000944 326.0
BYD3_k127_1321004_1 Protein of unknown function (DUF2723) K16928 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004039 277.0
BYD3_k127_1332418_0 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000131 549.0
BYD3_k127_1332418_1 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005808 439.0
BYD3_k127_1332418_2 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.0000000000000000000000000000000000000000000001608 182.0
BYD3_k127_134128_0 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006041 600.0
BYD3_k127_134128_1 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000013 372.0
BYD3_k127_134128_2 protein SCO1 SenC PrrC involved in biogenesis of respiratory and photosynthetic systems K07152 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007665 288.0
BYD3_k127_134128_3 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000005802 195.0
BYD3_k127_134128_4 ABC-type Zn2 transport system, periplasmic component surface adhesin - - - 0.000000003767 59.0
BYD3_k127_1347631_0 MutL protein K00854 - 2.7.1.17 3.741e-264 826.0
BYD3_k127_1347631_1 Evidence 4 Homologs of previously reported genes of - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001565 389.0
BYD3_k127_1347631_2 Evidence 5 No homology to any previously reported sequences - - - 0.0000000000000000000000000000000000000000000000005839 195.0
BYD3_k127_1347631_3 - - - - 0.0000000000000002008 85.0
BYD3_k127_1347631_4 - - - - 0.00000004968 57.0
BYD3_k127_1375207_0 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 GO:0003674,GO:0003824,GO:0004798,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009165,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.4.9 0.00001903 49.0
BYD3_k127_1375490_0 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 1.386e-224 721.0
BYD3_k127_1375490_1 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001615 582.0
BYD3_k127_1375490_2 Protein conserved in bacteria K07011 - - 0.000000000000000000000000000000000000000000000007851 180.0
BYD3_k127_1375490_3 - - - - 0.00000000000000000000000000000000000006844 152.0
BYD3_k127_1375490_4 - - - - 0.0000000000000000000676 93.0
BYD3_k127_1375490_5 protein kinase activity - - - 0.00002547 53.0
BYD3_k127_1376338_0 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis K00560 - 2.1.1.45 0.0000000000000000000000000000000000000000000000000000000000003467 214.0
BYD3_k127_1376338_1 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis K00287 - 1.5.1.3 0.00000000000000000000000000000000000000004089 164.0
BYD3_k127_1376338_2 YXWGXW repeat (2 copies) - - - 0.000000000000000005673 93.0
BYD3_k127_1376338_3 Protein conserved in bacteria - - - 0.0001746 44.0
BYD3_k127_1379017_0 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K01598,K13038 - 4.1.1.36,6.3.2.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001738 325.0
BYD3_k127_1379017_1 MotA/TolQ/ExbB proton channel family K03561 - - 0.00000000000000000000000000000000000000000000000000000000000000000006883 238.0
BYD3_k127_1379017_10 UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY - GO:0001101,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0007154,GO:0007165,GO:0008150,GO:0008194,GO:0008375,GO:0009719,GO:0009725,GO:0009735,GO:0009736,GO:0009739,GO:0009740,GO:0009755,GO:0009937,GO:0009938,GO:0009966,GO:0009968,GO:0009987,GO:0010033,GO:0010476,GO:0010646,GO:0010648,GO:0016262,GO:0016740,GO:0016757,GO:0016758,GO:0019222,GO:0023051,GO:0023052,GO:0023057,GO:0031323,GO:0032870,GO:0033993,GO:0042221,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464,GO:0048519,GO:0048523,GO:0048583,GO:0048585,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007,GO:0070887,GO:0071229,GO:0071310,GO:0071368,GO:0071370,GO:0071396,GO:0071495,GO:0140096,GO:1901700,GO:1901701,GO:2000377 - 0.0000000009311 72.0
BYD3_k127_1379017_2 Domain of unknown function (DUF1732) - - - 0.00000000000000000000000000000000000000000000000000003988 198.0
BYD3_k127_1379017_3 Essential for recycling GMP and indirectly, cGMP K00942 - 2.7.4.8 0.00000000000000000000000000000000000000000000000005658 188.0
BYD3_k127_1379017_4 Domain of unknown function (DUF814) - - - 0.00000000000000000000000000000000000005241 161.0
BYD3_k127_1379017_5 biopolymer transport protein K03559 - - 0.0000000000000000000000000000000000002723 146.0
BYD3_k127_1379017_6 biopolymer transport protein - - - 0.00000000000000000000000000003433 124.0
BYD3_k127_1379017_7 TIGRFAM TonB family protein K03832 - - 0.000000000000000001033 96.0
BYD3_k127_1379017_8 TIGRFAM phosphate binding protein K02040 - - 0.000000000002043 78.0
BYD3_k127_1379017_9 STAS domain - - - 0.000000000008764 70.0
BYD3_k127_1383453_0 Catalyzes the reversible phosphorylation of UMP to UDP K09903 GO:0003674,GO:0003824,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901576 2.7.4.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006322 324.0
BYD3_k127_1383453_1 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0019509,GO:0019752,GO:0043094,GO:0043102,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046523,GO:0071265,GO:0071267,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001205 307.0
BYD3_k127_1383453_10 Cytidylyltransferase family K00981 - 2.7.7.41 0.0001758 50.0
BYD3_k127_1383453_2 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002923 278.0
BYD3_k127_1383453_3 Belongs to the universal ribosomal protein uS2 family K02967 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000625 273.0
BYD3_k127_1383453_4 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 - - 0.00000000000000000000000000000000000000000000000000000000000000000000005984 249.0
BYD3_k127_1383453_5 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 - - 0.000000000000000000000000000000000000000000000000000000001497 205.0
BYD3_k127_1383453_6 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000000000000000000000000000000000001688 177.0
BYD3_k127_1383453_7 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0019538,GO:0022625,GO:0022626,GO:0030312,GO:0032991,GO:0034641,GO:0034645,GO:0040007,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000003554 178.0
BYD3_k127_1383453_8 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.0000000000000000000000000000000001145 136.0
BYD3_k127_1386391_0 Family of unknown function (DUF1028) - - - 0.00000000000000000000000000000000000000000000001536 178.0
BYD3_k127_1386391_1 COG2897 Rhodanese-related sulfurtransferase K01011 - 2.8.1.1,2.8.1.2 0.00000000000000000000000005179 117.0
BYD3_k127_1430324_0 PFAM NAD-dependent epimerase dehydratase - - - 2.092e-216 681.0
BYD3_k127_1430324_1 Prolyl oligopeptidase, N-terminal beta-propeller domain K01322 - 3.4.21.26 1.861e-205 662.0
BYD3_k127_1430324_2 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000004751 270.0
BYD3_k127_1430324_3 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003404 250.0
BYD3_k127_1430324_4 Activator of Hsp90 ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000538 233.0
BYD3_k127_1430324_5 PFAM regulatory protein, ArsR - - - 0.0000000000000000000000000000000000000000001282 160.0
BYD3_k127_1430324_6 - - - - 0.000000000000000000000000000000001674 136.0
BYD3_k127_1434088_0 WD40-like Beta Propeller Repeat K03641,K07277 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005795 285.0
BYD3_k127_1436442_0 long-chain fatty acid transporting porin activity - - - 0.0000000000000000000000000000000000000000000000001438 197.0
BYD3_k127_1437909_0 glutamate--cysteine ligase - - - 3.469e-216 688.0
BYD3_k127_1437909_1 Succinylglutamate desuccinylase / Aspartoacylase family K05526 - 3.5.1.96 0.00000000000000000000000000000000000000628 156.0
BYD3_k127_1437909_2 - - - - 0.00000000000000000000000000000000004866 155.0
BYD3_k127_1437909_3 cellulase activity - - - 0.0000000002042 74.0
BYD3_k127_1448278_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001149 536.0
BYD3_k127_1448278_1 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000115 392.0
BYD3_k127_1448278_10 Belongs to the bacterial ribosomal protein bL32 family K02911 GO:0000027,GO:0000302,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006950,GO:0006979,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009628,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042221,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0050896,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1901700,GO:1990904 - 0.000000000000008105 75.0
BYD3_k127_1448278_2 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000465 388.0
BYD3_k127_1448278_3 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002083 329.0
BYD3_k127_1448278_4 malonyl CoA-acyl carrier protein transacylase K00645,K15327,K15329,K15355,K15469 - 2.3.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002866 325.0
BYD3_k127_1448278_5 PFAM Short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006201 275.0
BYD3_k127_1448278_6 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 - 3.1.26.3 0.00000000000000000000000000000000000000000000000000001121 206.0
BYD3_k127_1448278_7 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 - 2.7.4.6 0.0000000000000000000000000000000000000000000004495 170.0
BYD3_k127_1448278_8 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 GO:0000035,GO:0000036,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016053,GO:0019637,GO:0019752,GO:0019842,GO:0031177,GO:0032787,GO:0033218,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044620,GO:0046394,GO:0046467,GO:0046493,GO:0048037,GO:0051192,GO:0071704,GO:0072330,GO:0072341,GO:0090407,GO:0140104,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 - 0.000000000000000000007135 101.0
BYD3_k127_1448278_9 Uncharacterized ACR, COG1399 K07040 - - 0.0000000000000000006459 96.0
BYD3_k127_1467638_0 PFAM AMP-dependent synthetase and ligase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001069 601.0
BYD3_k127_1497269_0 O-methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001417 280.0
BYD3_k127_1497269_1 Class II Aldolase and Adducin N-terminal domain K01628 - 4.1.2.17 0.00000000000000000000000000000000000000000000000000000000000907 215.0
BYD3_k127_1497269_2 Carbon dioxide concentrating mechanism carboxysome shell protein - - - 0.00000000000000000000000000000000003437 141.0
BYD3_k127_1497269_3 ethanolamine utilization protein EutN carboxysome structural protein Ccml K04028 GO:0006950,GO:0006974,GO:0008150,GO:0009987,GO:0033554,GO:0050896,GO:0051716 - 0.000000000000000004177 89.0
BYD3_k127_1497269_4 Ethanolamine utilisation protein EutN/carboxysome - - - 0.0000000002287 70.0
BYD3_k127_1515835_0 amine dehydrogenase activity K01179 - 3.2.1.4 0.000000000000000000000000000000000000000000000000000000000000000006525 239.0
BYD3_k127_1515835_1 - - - - 0.0000000000000008995 89.0
BYD3_k127_1515835_2 Cytochrome c - - - 0.00000000004263 70.0
BYD3_k127_1527927_0 alginic acid biosynthetic process K07218 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004846 390.0
BYD3_k127_1527927_1 lipoprotein involved in nitrous oxide reduction K19342 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000505 284.0
BYD3_k127_1527927_2 Nitrous oxide reductase K00376 - 1.7.2.4 0.000000000000000000000000000000000000000000000000000000000006558 209.0
BYD3_k127_157836_0 ATP ADP translocase K03301 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001576 349.0
BYD3_k127_157836_1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation K00322 - 1.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003376 281.0
BYD3_k127_157836_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000001595 240.0
BYD3_k127_157836_3 Methyltransferase type 12 - - - 0.00000000000000000000000000000000001017 148.0
BYD3_k127_157836_4 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.00000000000000000000000000000000144 143.0
BYD3_k127_157836_5 Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA K02533,K15396 - 2.1.1.200 0.00000000000000000008108 105.0
BYD3_k127_157836_6 PFAM Bacterial Ig-like domain (group 2) - - - 0.000001546 60.0
BYD3_k127_157836_7 membrane organization - - - 0.00000181 61.0
BYD3_k127_1579286_0 xanthine dehydrogenase activity - - - 7.109e-196 643.0
BYD3_k127_1579286_1 Sterol carrier protein domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001618 323.0
BYD3_k127_1579286_2 Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding K03520 - 1.2.5.3 0.00000000000000000000000000000000000000000000002301 174.0
BYD3_k127_1579286_3 CO dehydrogenase flavoprotein C-terminal domain K13479 - 1.17.1.4 0.000000000000000000000000000000000000000000000331 181.0
BYD3_k127_1579286_4 [2Fe-2S] binding domain K03518 - 1.2.5.3 0.0000000000000000000000000000000000000000001198 177.0
BYD3_k127_1582991_0 electron transfer flavoprotein-ubiquinone oxidoreductase K00311 - 1.5.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001517 466.0
BYD3_k127_1582991_1 PFAM Tetratricopeptide repeat - - - 0.0000000000000000004159 102.0
BYD3_k127_1595694_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000347 588.0
BYD3_k127_1595694_1 An AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism K01961 - 6.3.4.14,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006001 564.0
BYD3_k127_1595694_2 Ftsk_gamma K03466 GO:0000003,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0019954,GO:0030436,GO:0031323,GO:0031326,GO:0032502,GO:0043934,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:1903506,GO:2000112,GO:2001141 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002503 477.0
BYD3_k127_1595694_3 Type II/IV secretion system protein K02669 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001546 411.0
BYD3_k127_1595694_4 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735 - 4.2.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000001164 276.0
BYD3_k127_1595694_5 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.000000000000000000000000000000000000000003864 162.0
BYD3_k127_1595694_6 Belongs to the ComB family K05979 - 3.1.3.71 0.000000000000000000000000000000000000001351 161.0
BYD3_k127_1595694_7 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.000000000000000000000000005005 123.0
BYD3_k127_1595694_8 Tetratricopeptide repeat - - - 0.0005209 50.0
BYD3_k127_1612564_0 Pyridoxal-phosphate dependent enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000231 455.0
BYD3_k127_1612564_1 Carbon-nitrogen hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002316 435.0
BYD3_k127_1612564_2 Belongs to the glycosyl hydrolase family 6 K01179 - 3.2.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004821 438.0
BYD3_k127_1612564_3 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000001028 216.0
BYD3_k127_1621206_0 unfolded protein binding K04043 GO:0000166,GO:0000988,GO:0000989,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008144,GO:0008150,GO:0008270,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010033,GO:0010556,GO:0016020,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0016989,GO:0017076,GO:0017111,GO:0018995,GO:0019219,GO:0019222,GO:0020003,GO:0022607,GO:0030430,GO:0030554,GO:0031323,GO:0031326,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033554,GO:0033643,GO:0033646,GO:0033655,GO:0034620,GO:0035639,GO:0035966,GO:0035967,GO:0036094,GO:0042221,GO:0043167,GO:0043168,GO:0043169,GO:0043226,GO:0043227,GO:0043230,GO:0043531,GO:0043656,GO:0043657,GO:0043933,GO:0044085,GO:0044183,GO:0044215,GO:0044216,GO:0044217,GO:0044421,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0050789,GO:0050794,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0051171,GO:0051252,GO:0051716,GO:0060255,GO:0061077,GO:0065003,GO:0065007,GO:0065010,GO:0070887,GO:0071310,GO:0071840,GO:0071944,GO:0080090,GO:0097159,GO:0097367,GO:0140110,GO:1901265,GO:1901363,GO:1903506,GO:2001141 - 6.241e-280 874.0
BYD3_k127_1621206_1 5' nucleotidase family - - - 2.202e-197 630.0
BYD3_k127_1621206_2 Tetratricopeptide repeat - - - 0.00000007449 60.0
BYD3_k127_1624760_0 PFAM polysaccharide biosynthesis protein K03328 - - 0.00000000000000000000000000000000000000001954 157.0
BYD3_k127_1624760_1 PFAM blue (type 1) copper domain protein - - - 0.0000006275 54.0
BYD3_k127_1639061_0 PFAM extracellular solute-binding protein family 1 K02040 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003188 368.0
BYD3_k127_1639061_1 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002814 362.0
BYD3_k127_1639061_2 Signal transduction histidine kinase K07636 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000008826 294.0
BYD3_k127_1639061_3 Phosphate-selective porin O and P K07221 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001911 264.0
BYD3_k127_1640246_0 Involved in the tonB-independent uptake of proteins - - - 0.000000000000000000000000000000000000000005723 173.0
BYD3_k127_1640246_1 Thioredoxin-like - - - 0.000000000000000000001882 101.0
BYD3_k127_1640246_2 Protein of unknown function (DUF3570) - - - 0.0000000000000000003734 102.0
BYD3_k127_1640246_3 peptidase activity, acting on L-amino acid peptides K20276,K21449 - - 0.0000000003193 74.0
BYD3_k127_1640246_4 Ami_3 K01448 GO:0005575,GO:0005623,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0044464 3.5.1.28 0.00000726 56.0
BYD3_k127_1640246_5 Domain of unknown function (DUF4266) - - - 0.0001863 52.0
BYD3_k127_164082_0 Ribonuclease H K03469 - 3.1.26.4 0.0000000000000000000000001182 113.0
BYD3_k127_164082_1 ThiF family - - - 0.000000000000000000000000157 111.0
BYD3_k127_164082_2 C4-type zinc ribbon domain K07164,K22391 - 3.5.4.16 0.00000000000000891 84.0
BYD3_k127_167132_0 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003442 479.0
BYD3_k127_167132_1 glutamate-tRNA ligase activity K01885,K09698 - 6.1.1.17,6.1.1.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001821 403.0
BYD3_k127_167132_2 Glycerophosphoryl diester phosphodiesterase family K01126 - 3.1.4.46 0.0000000000000000000000000000000000000000289 161.0
BYD3_k127_167132_3 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.000000001597 70.0
BYD3_k127_1673515_0 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 - 2.1.1.192 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002577 295.0
BYD3_k127_1673515_1 Sensor histidine kinase PilS, PAS domain-containing K02668,K07709 - 2.7.13.3 0.000000000000000001419 88.0
BYD3_k127_1673515_3 Serine threonine protein kinase - - - 0.00000004173 65.0
BYD3_k127_1675710_0 4-alpha-glucanotransferase K00705 - 2.4.1.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002087 564.0
BYD3_k127_1675710_1 UTP--glucose-1-phosphate uridylyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000954 489.0
BYD3_k127_1675710_2 arylsulfatase A - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003757 308.0
BYD3_k127_1675710_3 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K02806 - - 0.00000000000000000000003855 104.0
BYD3_k127_1675710_4 C4-type zinc ribbon domain K07164 - - 0.0002532 48.0
BYD3_k127_1680465_0 General secretory system II protein E domain protein K02652 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001107 586.0
BYD3_k127_1680465_1 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001191 541.0
BYD3_k127_1680465_2 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III K15778 - 5.4.2.2,5.4.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008374 507.0
BYD3_k127_1680465_3 Type II secretion system (T2SS), protein F K02653 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001686 460.0
BYD3_k127_1680465_4 Type II/IV secretion system protein K02669 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002497 432.0
BYD3_k127_1680465_5 PFAM Nucleotidyl transferase K00971 - 2.7.7.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009364 329.0
BYD3_k127_1680465_6 4TM region of pyridine nucleotide transhydrogenase, mitoch K00324 - 1.6.1.2 0.000000000000000000000000000002958 122.0
BYD3_k127_1680465_7 Competence protein ComEA K02237 - - 0.00000000000003146 81.0
BYD3_k127_1680465_8 colicin V production K03558 - - 0.00000000001363 73.0
BYD3_k127_1680465_9 Sensor histidine kinase PilS, PAS domain-containing K02668,K07709 - 2.7.13.3 0.00000000002419 74.0
BYD3_k127_168310_0 PFAM Band 7 protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003356 452.0
BYD3_k127_168310_1 chorismate mutase domain of gram positive AroA protein K13853 - 2.5.1.54,5.4.99.5 0.000000000000000000000000000000000000000000000000000000000000000006223 237.0
BYD3_k127_168310_2 cellular response to DNA damage stimulus K07340 - - 0.00000000000000000000000000000000000001347 149.0
BYD3_k127_168310_3 PFAM Tetratricopeptide repeat - - - 0.0000000009617 66.0
BYD3_k127_1687578_0 Domain of unknown function (DUF4153) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001013 608.0
BYD3_k127_1687578_1 ABC transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001896 464.0
BYD3_k127_1687578_2 Peptidase family M1 domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002109 449.0
BYD3_k127_1687578_3 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000002525 190.0
BYD3_k127_1687578_4 PFAM glycosyl transferase group 1 - - - 0.000000000004508 78.0
BYD3_k127_1687578_5 Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11785 - - 0.000000237 53.0
BYD3_k127_1690249_0 histidine kinase HAMP region domain protein K07716 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003335 568.0
BYD3_k127_1690249_1 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 - 1.17.7.1,1.17.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009393 485.0
BYD3_k127_1741156_0 S-adenosylmethionine-dependent methyltransferase K06969,K12297 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008169,GO:0008173,GO:0008649,GO:0008757,GO:0009383,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.173,2.1.1.191,2.1.1.264 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009192 496.0
BYD3_k127_1741156_1 GtrA-like protein - - - 0.000000000000000000000000000000000000000000000000000000000000000001311 237.0
BYD3_k127_1741156_2 Protein of unknown function (DUF541) K09797 - - 0.0000000000000000000000000000000000000000000001286 177.0
BYD3_k127_1741156_3 Protein of unknown function (DUF664) - - - 0.0000000000000000000272 98.0
BYD3_k127_1745042_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00283 - 1.4.4.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005785 599.0
BYD3_k127_1745042_1 Glycine cleavage system P-protein K00282 - 1.4.4.2 0.00000000000000000000000000000000000000000000000000000000000006975 223.0
BYD3_k127_1749149_0 protein kinase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000637 255.0
BYD3_k127_1755311_0 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001171 342.0
BYD3_k127_1755311_1 transport system permease component K01992 - - 0.000000000000000000000000000000000000000000000000000000000005055 217.0
BYD3_k127_1755311_2 transport system, permease component K01992 - - 0.000000000000000000000000000000000000000000000000007451 192.0
BYD3_k127_1755311_3 Thermolysin metallopeptidase, alpha-helical domain K01400 - 3.4.24.28 0.000299 52.0
BYD3_k127_1755311_4 extracellular matrix structural constituent - - - 0.0003586 54.0
BYD3_k127_1799533_0 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001372 559.0
BYD3_k127_1799533_1 TIGRFAM Na H antiporter, bacterial form K03316 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008127 307.0
BYD3_k127_1799533_2 IPT/TIG domain - - - 0.000000000000000735 91.0
BYD3_k127_1799533_3 Cytochrome c - - - 0.0000000000004718 82.0
BYD3_k127_1799533_4 NHL repeat - - - 0.0000005263 59.0
BYD3_k127_1807605_0 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.00000000000000000000000000000000000000008108 173.0
BYD3_k127_1807605_1 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.0000000000000000000000000000000000003288 158.0
BYD3_k127_1807605_2 O-linked GlcNAc transferase-putative TPR-containing transmembrane protein - - - 0.0000000000000000000000000009474 131.0
BYD3_k127_1807605_3 transferase activity, transferring glycosyl groups - - - 0.00000000000001751 86.0
BYD3_k127_1807605_4 transferase activity, transferring glycosyl groups - - - 0.000002029 61.0
BYD3_k127_18129_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 6.987e-252 802.0
BYD3_k127_18129_1 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 GO:0000166,GO:0000502,GO:0002020,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009376,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0019899,GO:0019904,GO:0030163,GO:0030164,GO:0030312,GO:0030554,GO:0031333,GO:0031597,GO:0032271,GO:0032272,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0035639,GO:0036094,GO:0040007,GO:0042623,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0043254,GO:0043335,GO:0044087,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051129,GO:0051301,GO:0051704,GO:0065007,GO:0070011,GO:0071704,GO:0071944,GO:0097159,GO:0097367,GO:0097718,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1902494,GO:1904949,GO:1905368,GO:1905369 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008803 560.0
BYD3_k127_18129_2 Thiolase, C-terminal domain K00626 - 2.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001895 428.0
BYD3_k127_18129_3 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 GO:0003674,GO:0003824,GO:0004019,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0015949,GO:0016874,GO:0016879,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033554,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046033,GO:0046040,GO:0046085,GO:0046086,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0050896,GO:0051716,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001603 425.0
BYD3_k127_18129_4 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001399 304.0
BYD3_k127_18129_5 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000002308 229.0
BYD3_k127_18129_6 Necessary for normal cell division and for the maintenance of normal septation K03978 - - 0.0000000000000000000000000000000000000000000002661 175.0
BYD3_k127_18129_7 PFAM thioesterase superfamily - - - 0.0000000000000000000000002181 109.0
BYD3_k127_1814634_0 Phenylalanyl-tRNA synthetase, beta subunit K01890 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006243 486.0
BYD3_k127_1814634_1 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.20 0.000000000000000000000000000000000000000004403 155.0
BYD3_k127_1816890_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 7.622e-221 699.0
BYD3_k127_1816890_1 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003537 345.0
BYD3_k127_1816890_2 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.000000000000000000000000000000000000000000000000000000003141 211.0
BYD3_k127_1816890_3 Belongs to the bacterial ribosomal protein bL27 family K02899 GO:0000027,GO:0001558,GO:0003674,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040008,GO:0042254,GO:0042255,GO:0042256,GO:0042273,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0044877,GO:0048518,GO:0050789,GO:0050794,GO:0051128,GO:0065003,GO:0065007,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090069,GO:0090070,GO:1901564,GO:1901566,GO:1901576,GO:1902626,GO:1990904 - 0.00000000000000000000000000001707 119.0
BYD3_k127_1816890_4 This protein binds to 23S rRNA in the presence of protein L20 K02888 GO:0003674,GO:0003735,GO:0005198 - 0.000000000000000000000000001711 115.0
BYD3_k127_1816890_5 Parallel beta-helix repeats - - - 0.00000000000000000000000395 114.0
BYD3_k127_1818546_0 Molybdopterin oxidoreductase, iron-sulfur binding subunit K00184 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005835 516.0
BYD3_k127_1818546_1 PFAM CBS domain K03699 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002001 438.0
BYD3_k127_1818546_2 Cytochrome c7 and related cytochrome c - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001285 291.0
BYD3_k127_1821572_0 serine-type peptidase activity K08676 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005579 396.0
BYD3_k127_1821572_1 Tricorn protease C1 domain K08676 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002923 365.0
BYD3_k127_1821572_2 Glycosyltransferase Family 4 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004109 264.0
BYD3_k127_1821572_3 PFAM NAD-dependent epimerase dehydratase K15856 - 1.1.1.281 0.0000000000000000000000000000000000000000000000000000000000000000000898 241.0
BYD3_k127_1821572_4 Chalcone and stilbene synthases, C-terminal domain K16167 - - 0.00000000000000000000000000000000000000000000000000000000004387 235.0
BYD3_k127_1821572_5 Male sterility protein K01710,K08678,K21211 - 4.1.1.35,4.2.1.46 0.000000000000000000000000000000000001138 141.0
BYD3_k127_1821572_6 FAD binding domain - - - 0.00000000000000000000000000000002505 141.0
BYD3_k127_1821572_7 Dehydrogenase E1 component K00164 - 1.2.4.2 0.000000004748 63.0
BYD3_k127_1822865_0 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 GO:0003674,GO:0003824,GO:0004518,GO:0004540,GO:0006139,GO:0006396,GO:0006399,GO:0006401,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016075,GO:0016787,GO:0016788,GO:0019439,GO:0034470,GO:0034641,GO:0034655,GO:0034660,GO:0034661,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0140098,GO:1901360,GO:1901361,GO:1901575 2.7.7.56 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000136 287.0
BYD3_k127_1822865_1 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 - 3.6.1.66 0.000000000000000000000000000000000000000000000000000000001092 207.0
BYD3_k127_1822865_2 Domain of unknown function (DU1801) - - - 0.00000000000000000000000000000000000003275 151.0
BYD3_k127_1822865_3 PFAM Sporulation and spore germination - - - 0.00000000000001293 77.0
BYD3_k127_1822865_4 - - - - 0.0000000000003787 81.0
BYD3_k127_1822865_5 A domain in the BMP inhibitor chordin and in microbial proteins. - - - 0.000001817 57.0
BYD3_k127_1822865_6 PFAM Na-Ca exchanger integrin-beta4 peptidase-like FG-GAP K20276 - - 0.00002656 54.0
BYD3_k127_1831557_0 Enoyl-CoA hydratase/isomerase K15866 - 5.3.3.18 0.00000000000000000000000000000000000000000000000008378 188.0
BYD3_k127_1831557_1 Belongs to the LOG family K06966 - 3.2.2.10 0.00000000000000000000000000000000000000000000009272 177.0
BYD3_k127_1831557_2 PFAM Aminotransferase class I and II - - - 0.000000000000000000000000000000000000000003656 169.0
BYD3_k127_1831557_3 EamA-like transporter family - - - 0.0000000000000000000000000004979 120.0
BYD3_k127_1831557_4 Belongs to the peptidase S1C family K04771 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005575,GO:0005623,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0016787,GO:0017171,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043170,GO:0044238,GO:0044464,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.21.107 0.000000000000002388 89.0
BYD3_k127_1831557_5 Putative adhesin - - - 0.000000000007418 76.0
BYD3_k127_1831557_6 Rdx family K07401 - - 0.00000001557 57.0
BYD3_k127_1831557_7 exo-alpha-(2->6)-sialidase activity - - - 0.00000002173 66.0
BYD3_k127_1831557_8 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K07277 - - 0.00009376 55.0
BYD3_k127_183860_0 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002291 317.0
BYD3_k127_183860_1 Alpha-glucan phosphorylase K00688 - 2.4.1.1 0.000000000000000000216 91.0
BYD3_k127_183860_2 Right handed beta helix region - - - 0.000007402 59.0
BYD3_k127_1859841_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 2.632e-318 986.0
BYD3_k127_1859841_1 Haemolysin-type calcium-binding - - - 0.00000000000000000000000000000000000000000001851 185.0
BYD3_k127_1863913_0 Serine protease with a broad substrate specificity K17734 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005488,GO:0005509,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0016787,GO:0017171,GO:0019538,GO:0043167,GO:0043169,GO:0043170,GO:0044238,GO:0046872,GO:0070011,GO:0071704,GO:0140096,GO:1901564 - 0.00000000000000000000000000000000000000000000244 188.0
BYD3_k127_1895160_0 Superoxide dismutase K04564 - 1.15.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000113 259.0
BYD3_k127_1895160_1 Haloacid dehalogenase-like hydrolase - - - 0.00000000000000000000000000000000000000000000000002249 188.0
BYD3_k127_1895160_2 peptidase activity - - - 0.00000000000000000000000000000000000000000000000006442 193.0
BYD3_k127_1895160_3 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.000000000000000000000000000000000000000000005816 173.0
BYD3_k127_1895160_4 Dimerisation domain K00543 - 2.1.1.4 0.000000000000000000000000000001239 138.0
BYD3_k127_1895160_5 lysyltransferase activity - - - 0.000000000000000777 90.0
BYD3_k127_1934718_0 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007936 343.0
BYD3_k127_1934718_1 tRNA (guanine(37)-N(1))-methyltransferase activity - - - 0.00000000000000000000000000000000000000000000000006342 187.0
BYD3_k127_1934718_2 Plays a role in the regulation of phosphate uptake K02039 - - 0.0001686 48.0
BYD3_k127_1957620_0 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.0000000000000000000000000000000000000000000000000000000000002605 231.0
BYD3_k127_1957620_1 Bacterial membrane protein, YfhO - - - 0.0000000000000000000000000000000000000000000000000000000003691 228.0
BYD3_k127_1957620_10 Heptaprenyl diphosphate synthase component I K00805 - 2.5.1.30 0.00000000000004628 79.0
BYD3_k127_1957620_11 NusG domain II - - - 0.000000000001821 79.0
BYD3_k127_1957620_2 Belongs to the FPP GGPP synthase family K02523,K13789 - 2.5.1.1,2.5.1.10,2.5.1.29,2.5.1.90 0.00000000000000000000000000000000000000000000000000000000327 212.0
BYD3_k127_1957620_3 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.00000000000000000000000000000000000000000000001286 187.0
BYD3_k127_1957620_4 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.000000000000000000000000000000000000000000004228 185.0
BYD3_k127_1957620_5 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.000000000000000000000000000000004671 132.0
BYD3_k127_1957620_6 arylsulfatase A - - - 0.00000000000000000000000008992 114.0
BYD3_k127_1957620_7 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.000000000000000000000008699 106.0
BYD3_k127_1957620_8 Arginyl tRNA synthetase N terminal dom K01887 - 6.1.1.19 0.00000000000000000001355 96.0
BYD3_k127_1957620_9 Sulfatase - - - 0.0000000000000002677 87.0
BYD3_k127_1964322_0 von Willebrand factor type A domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002599 435.0
BYD3_k127_1964322_1 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000293 333.0
BYD3_k127_1964322_2 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005233 299.0
BYD3_k127_1964322_3 Flavodoxin-like fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003134 249.0
BYD3_k127_1964322_4 Inner membrane component of T3SS, cytoplasmic domain - - - 0.00000000000000000000000000000000000000000000000000000000001966 231.0
BYD3_k127_1964322_5 Ferritin-like domain K03594 - 1.16.3.1 0.000000000000000000000000000000000000000000000000000000000901 208.0
BYD3_k127_1964322_6 translation initiation inhibitor, yjgF family K04782 - 4.2.99.21 0.000000000000000000000000000000000000000003154 173.0
BYD3_k127_1964322_7 protein secretion K20276 - - 0.000000005996 70.0
BYD3_k127_1974432_0 Amidohydrolase family - - - 2.682e-199 640.0
BYD3_k127_1985731_0 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 0.0 1131.0
BYD3_k127_1985731_1 C-terminus of AA_permease K03294 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004151 280.0
BYD3_k127_1985731_2 COG0346 Lactoylglutathione lyase and related lyases K15975 - - 0.000000000000000000000000000000000000000000000000000000000000000003985 233.0
BYD3_k127_1985731_3 PFAM Peptidase family M28 - - - 0.000000001449 70.0
BYD3_k127_1998687_0 Peptidase family C25 - - - 0.000000000000009291 89.0
BYD3_k127_2005047_0 imidazolonepropionase activity - - - 0.00000000000000000000000000000000000000000000000000000000000007531 233.0
BYD3_k127_2005047_1 Calcium/calmodulin dependent protein kinase II association domain - - - 0.000000000000000000989 92.0
BYD3_k127_2005047_2 Beta-lactamase - - - 0.0000000000000003304 92.0
BYD3_k127_2018803_0 N-acetyl-alpha-D-glucosaminyl L-malate synthase K00754 GO:0003674,GO:0003824,GO:0016740,GO:0016757 - 0.000000000000000007267 89.0
BYD3_k127_2018803_1 polygalacturonase activity K20276 - - 0.00001026 57.0
BYD3_k127_2021929_0 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004961 546.0
BYD3_k127_2021929_1 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002438 389.0
BYD3_k127_2021929_10 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 - - 0.0000000000000000000000000000000000000000000000000000000000001255 218.0
BYD3_k127_2021929_11 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 GO:0000027,GO:0000049,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000001311 214.0
BYD3_k127_2021929_12 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000001192 201.0
BYD3_k127_2021929_13 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0008150,GO:0015934,GO:0016020,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0040007,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0071944,GO:0097159,GO:1901363,GO:1990904 - 0.00000000000000000000000000000000000000000000000000002866 189.0
BYD3_k127_2021929_14 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 - - 0.000000000000000000000000000000000000000000000000004982 183.0
BYD3_k127_2021929_15 Forms part of the polypeptide exit tunnel K02926,K16193 GO:0001130,GO:0001217,GO:0003674,GO:0003676,GO:0003700,GO:0003723,GO:0003735,GO:0004857,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005844,GO:0005886,GO:0006355,GO:0006412,GO:0006417,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0008428,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0015934,GO:0016020,GO:0016043,GO:0017148,GO:0019219,GO:0019222,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0030234,GO:0030312,GO:0030371,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032069,GO:0032074,GO:0032268,GO:0032269,GO:0032991,GO:0032993,GO:0034248,GO:0034249,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042788,GO:0043043,GO:0043086,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044092,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045182,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050790,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0051252,GO:0051253,GO:0051336,GO:0051346,GO:0060255,GO:0060698,GO:0060699,GO:0060700,GO:0060701,GO:0060702,GO:0065003,GO:0065007,GO:0065009,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0080090,GO:0097159,GO:0098772,GO:0140110,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1902679,GO:1903506,GO:1903507,GO:1990904,GO:2000112,GO:2000113,GO:2001141 - 0.0000000000000000000000000000000000000000000000001545 185.0
BYD3_k127_2021929_16 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.000000000000000000000000000000000000000000000004099 179.0
BYD3_k127_2021929_17 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022613,GO:0032991,GO:0034641,GO:0034645,GO:0042254,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000002743 167.0
BYD3_k127_2021929_18 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 - - 0.00000000000000000000000000000000000000000003591 164.0
BYD3_k127_2021929_19 cytoplasmic translation K02946 GO:0001072,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006355,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0015935,GO:0019219,GO:0019222,GO:0019538,GO:0022626,GO:0022627,GO:0031323,GO:0031326,GO:0031554,GO:0031564,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043244,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0050789,GO:0050794,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0140110,GO:1901564,GO:1901566,GO:1901576,GO:1903506,GO:1990904,GO:2000112,GO:2001141 - 0.00000000000000000000000000000000000001044 153.0
BYD3_k127_2021929_2 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 2.7.7.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101 361.0
BYD3_k127_2021929_20 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000003351 145.0
BYD3_k127_2021929_21 Ribosomal protein L17 K02879 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000000005533 150.0
BYD3_k127_2021929_22 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.00000000000000000000000000000000002908 135.0
BYD3_k127_2021929_23 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit K02895 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000004248 137.0
BYD3_k127_2021929_24 Binds to the 23S rRNA K02876 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000009778 138.0
BYD3_k127_2021929_25 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000003555 124.0
BYD3_k127_2021929_26 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0008097,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.000000000000000000000000000005205 123.0
BYD3_k127_2021929_27 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 - - 0.0000000000000000000000000002296 115.0
BYD3_k127_2021929_28 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000009037 107.0
BYD3_k127_2021929_29 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000005164 109.0
BYD3_k127_2021929_3 Methionine aminopeptidase K01265 - 3.4.11.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002658 317.0
BYD3_k127_2021929_30 Ribosomal protein L30p/L7e K02907 - - 0.000000000002087 76.0
BYD3_k127_2021929_31 Belongs to the universal ribosomal protein uL29 family K02904 - - 0.000000000008022 70.0
BYD3_k127_2021929_32 Belongs to the bacterial ribosomal protein bL36 family K02919 - - 0.00000000001744 64.0
BYD3_k127_2021929_4 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001894 283.0
BYD3_k127_2021929_5 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006914 254.0
BYD3_k127_2021929_6 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358,K15771 GO:0001666,GO:0001817,GO:0001819,GO:0002791,GO:0002793,GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0006950,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009274,GO:0009275,GO:0009628,GO:0009986,GO:0009987,GO:0010035,GO:0010038,GO:0010039,GO:0010339,GO:0010467,GO:0016020,GO:0019538,GO:0019899,GO:0022610,GO:0030312,GO:0032677,GO:0032757,GO:0032879,GO:0032880,GO:0034641,GO:0034645,GO:0035375,GO:0035821,GO:0036293,GO:0040007,GO:0042221,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044003,GO:0044068,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044403,GO:0044406,GO:0044419,GO:0044424,GO:0044426,GO:0044444,GO:0044462,GO:0044464,GO:0044650,GO:0044651,GO:0048518,GO:0048522,GO:0050707,GO:0050708,GO:0050714,GO:0050715,GO:0050789,GO:0050794,GO:0050896,GO:0051046,GO:0051047,GO:0051049,GO:0051050,GO:0051222,GO:0051223,GO:0051239,GO:0051240,GO:0051701,GO:0051704,GO:0051817,GO:0065007,GO:0070201,GO:0070482,GO:0071704,GO:0071944,GO:0090087,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903530,GO:1903532,GO:1904951,GO:2000482,GO:2000484 - 0.0000000000000000000000000000000000000000000000000000000000000000000000006217 246.0
BYD3_k127_2021929_7 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 - - 0.00000000000000000000000000000000000000000000000000000000000000000001139 239.0
BYD3_k127_2021929_8 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.000000000000000000000000000000000000000000000000000000000000000002967 235.0
BYD3_k127_2021929_9 histidine kinase A domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000002231 249.0
BYD3_k127_2037362_0 FeS assembly protein SufB K07033,K09014 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006790,GO:0008150,GO:0008152,GO:0009536,GO:0009842,GO:0009987,GO:0016043,GO:0016226,GO:0022607,GO:0031163,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044085,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0048037,GO:0051186,GO:0051536,GO:0051537,GO:0051539,GO:0051540,GO:0071840 - 2.204e-250 779.0
BYD3_k127_2037362_1 TIGRFAM FeS assembly ATPase SufC K09013 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002993 383.0
BYD3_k127_2037362_2 Transcriptional regulator - - - 0.000000000000000000008116 97.0
BYD3_k127_2037362_3 Uncharacterized protein family (UPF0051) K09015 - - 0.00000000006575 68.0
BYD3_k127_203858_0 L-asparaginase II - - - 0.0000000000000000000000000000000000000000000000000000000000000009765 229.0
BYD3_k127_203858_1 Peptidase family M28 - - - 0.0000000000000000000000000000000000000000000000000000001704 211.0
BYD3_k127_203858_2 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella - - - 0.0000000000000000000000000000000000000000000000000001257 206.0
BYD3_k127_203858_3 Could be involved in septation K06412 - - 0.00000000000000000000008316 107.0
BYD3_k127_203858_4 L-asparaginase II - - - 0.0000000001683 65.0
BYD3_k127_204982_0 MgtE intracellular N domain K06213 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000589 330.0
BYD3_k127_204982_1 PhoH-like protein K06217 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004006 321.0
BYD3_k127_204982_2 PFAM sigma-54 factor interaction domain-containing protein K02481,K07714,K10943 - - 0.0000000000000000000000000000000000000000000000000000000000000000000008473 265.0
BYD3_k127_204982_3 CBS domain containing protein K03699 - - 0.00000000000000000000000000000000000000000000000000000000001604 227.0
BYD3_k127_204982_4 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.00000000000000000009804 101.0
BYD3_k127_2062395_0 glucosamine-1-phosphate N-acetyltransferase activity K00973 - 2.7.7.24 0.000000000000000000000000000000000000000000000000000000000000000000001936 252.0
BYD3_k127_2062395_1 regulator of chromosome condensation, RCC1 - - - 0.000000000000000000000000000000000000000000000000001994 209.0
BYD3_k127_2062395_2 Protein of unknown function (DUF1460) - - - 0.00000000000000000000397 104.0
BYD3_k127_207512_0 PFAM diacylglycerol kinase catalytic region - - - 0.000000000000000000000000000000000000000000000000000003323 201.0
BYD3_k127_207512_1 FIST N domain - - - 0.000000000000000000000000000000000000000000001958 181.0
BYD3_k127_207512_2 - - - - 0.000000000000000000000000000002351 134.0
BYD3_k127_207512_3 - - - - 0.00000000000000000003244 94.0
BYD3_k127_207512_4 Polymer-forming cytoskeletal - - - 0.000000000503 66.0
BYD3_k127_2076575_1 long-chain fatty acid transporting porin activity - - - 0.000000000000000000000007169 114.0
BYD3_k127_2084619_0 PFAM Glycosyl transferase, group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002051 604.0
BYD3_k127_2084619_1 ABC transporter K09689,K09691 - 3.6.3.38 0.00000000000000000000000000000000000000000000000000000000000000000001038 249.0
BYD3_k127_2084619_2 Glycosyl transferase 4-like domain - - - 0.000000000000000000000000000000000000000000000000000000000001866 228.0
BYD3_k127_2084619_3 Conserved TM helix - - - 0.00000000000000000000000000000000000000000000000000001359 198.0
BYD3_k127_2084619_4 ABC-2 type transporter K09690 - - 0.0000000000000000000000000000000002093 140.0
BYD3_k127_2084619_5 Protein conserved in bacteria K20444 - - 0.0000000000000000000000000000000007808 145.0
BYD3_k127_2084619_6 lipolytic protein G-D-S-L family - - - 0.000008128 58.0
BYD3_k127_2084619_7 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 GO:0000271,GO:0003674,GO:0003824,GO:0005975,GO:0005976,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008831,GO:0009058,GO:0009059,GO:0009225,GO:0009226,GO:0009987,GO:0016051,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019305,GO:0019438,GO:0033692,GO:0034637,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044271,GO:0044281,GO:0045226,GO:0046379,GO:0046383,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901576 1.1.1.133 0.00001448 49.0
BYD3_k127_211042_0 Sigma-54 factor, Activator interacting domain (AID) K03092 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006261 370.0
BYD3_k127_211042_1 lipopolysaccharide transport protein B ATP-binding component of ABC superfamily K01990,K06861 GO:0003674,GO:0003824,GO:0005215,GO:0005319,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006869,GO:0008150,GO:0010876,GO:0015221,GO:0015399,GO:0015405,GO:0015437,GO:0015920,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0031224,GO:0032991,GO:0033036,GO:0034040,GO:0042623,GO:0042626,GO:0043190,GO:0043492,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944,GO:0098533,GO:0098796,GO:0098797,GO:1901264,GO:1901505,GO:1902494,GO:1902495,GO:1904949,GO:1990351 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004782 316.0
BYD3_k127_211042_2 Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion K06023 - - 0.00000000000000000000000000000000000000000000002292 181.0
BYD3_k127_211042_3 Lipid A biosynthesis K02517 - 2.3.1.241 0.000000000000000000000000000000000002329 147.0
BYD3_k127_211042_4 Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase K05808 - - 0.0000009194 55.0
BYD3_k127_211042_5 Lipopolysaccharide-assembly, LptC-related - - - 0.0001506 51.0
BYD3_k127_2124816_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1223.0
BYD3_k127_2124816_1 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 GO:0003674,GO:0003824,GO:0004812,GO:0004829,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006435,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002608 605.0
BYD3_k127_2124816_2 PFAM Aminotransferase class I and II K00639 - 2.3.1.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001228 506.0
BYD3_k127_2124816_3 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.00000000000000000000000000000000000000000000000000000000000000004434 231.0
BYD3_k127_2124816_4 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP) K06153 - 3.6.1.27 0.0000000000000000000000000000000000000000000000000001932 199.0
BYD3_k127_2124816_5 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.0000000000000000000000000000000000000000000000005722 190.0
BYD3_k127_2124816_6 Glycosyl transferase family 41 - - - 0.000000000000000000000000004493 124.0
BYD3_k127_2124816_7 Parallel beta-helix repeats - - - 0.00001102 52.0
BYD3_k127_2124816_8 Carbon dioxide concentrating mechanism carboxysome shell protein K04027 - - 0.0001018 47.0
BYD3_k127_2124816_9 - - - - 0.0009375 51.0
BYD3_k127_2130524_0 spermidine synthase activity K00797 GO:0006576,GO:0006595,GO:0006596,GO:0006807,GO:0008150,GO:0008152,GO:0008216,GO:0008295,GO:0009058,GO:0009308,GO:0009309,GO:0009987,GO:0034641,GO:0042401,GO:0044106,GO:0044237,GO:0044249,GO:0044271,GO:0071704,GO:0097164,GO:1901564,GO:1901566,GO:1901576 2.5.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000001069 273.0
BYD3_k127_2130524_1 NUDIX domain - - - 0.000003214 49.0
BYD3_k127_2167773_0 Methyltransferase domain - - - 0.0000000000000000000000002091 109.0
BYD3_k127_2167773_1 lipolytic protein G-D-S-L family - - - 0.00000000000000000006218 104.0
BYD3_k127_2179603_0 helicase K10843 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006016 625.0
BYD3_k127_2179603_1 - - - - 0.000000000000000000000000000000000000000000000000000001272 208.0
BYD3_k127_218420_0 Biotin and Thiamin Synthesis associated domain K03150 - 4.1.99.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001187 407.0
BYD3_k127_218420_1 Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S K03149 GO:0003674,GO:0003824,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.8.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009326 351.0
BYD3_k127_218420_10 amine dehydrogenase activity - GO:0005575,GO:0005618,GO:0005623,GO:0030312,GO:0044464,GO:0071944 - 0.0000002849 61.0
BYD3_k127_218420_11 DinB family - - - 0.0000984 52.0
BYD3_k127_218420_2 Belongs to the cysteine synthase cystathionine beta- synthase family K01738,K12339,K21949 - 2.5.1.140,2.5.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005272 326.0
BYD3_k127_218420_3 arylsulfatase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001375 285.0
BYD3_k127_218420_4 Beta-lactamase superfamily domain K06136 - - 0.0000000000000000000000000000000000000000000000002197 186.0
BYD3_k127_218420_5 Aldo keto reductase - - - 0.00000000000000000000000000000000000000000000002653 184.0
BYD3_k127_218420_6 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.000000000000000000000000000000000000000002823 162.0
BYD3_k127_218420_7 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 - 2.5.1.3 0.0000000000000007164 87.0
BYD3_k127_218420_9 thiamine diphosphate biosynthetic process K03154 - - 0.00000005093 59.0
BYD3_k127_2188592_0 DEAD-like helicases superfamily K11927 - 3.6.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006521 503.0
BYD3_k127_2188592_1 Fatty acid desaturase K10255 - 1.14.19.23,1.14.19.45 0.0000000000000000000000000000000000000000000191 164.0
BYD3_k127_2188592_2 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.0000000000000000000000000003448 130.0
BYD3_k127_2235015_0 Domain of unknown function (DUF4159) - - - 0.00000000000000000000000000000000000000000000000000000000000000000002073 240.0
BYD3_k127_2235015_1 PFAM peptidase S8 and S53, subtilisin, kexin, sedolisin - - - 0.00000000000000000000000000000000000000000000005212 183.0
BYD3_k127_2235015_2 Evidence 5 No homology to any previously reported sequences - - - 0.00000005472 64.0
BYD3_k127_2236204_0 Protein of unknown function (DUF1428) - - - 0.00000000000000000000000000000000000000000000000004945 180.0
BYD3_k127_2236204_1 manganese ion transmembrane transporter activity - - - 0.0000001054 64.0
BYD3_k127_2238030_0 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001514 432.0
BYD3_k127_2238030_1 Associated with various cellular activities K03924 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008018 371.0
BYD3_k127_2238030_2 Evidence 4 Homologs of previously reported genes of - - - 0.0000002389 62.0
BYD3_k127_2238030_3 PBS lyase HEAT domain protein repeat-containing protein - - - 0.0000006431 60.0
BYD3_k127_2264770_0 Dehydrogenase E1 component K11381 - 1.2.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001767 308.0
BYD3_k127_2264770_1 chaperone-mediated protein folding - - - 0.00000000000000000000000000004958 135.0
BYD3_k127_2265973_0 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.000000000000000000000000000000000000000000000000000000000006147 218.0
BYD3_k127_2265973_1 - - - - 0.000000000000000000000000000000000000000000001336 173.0
BYD3_k127_2265973_2 DoxX - - - 0.000000000000000000000000000002429 126.0
BYD3_k127_2265973_3 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 - 4.1.1.23 0.000000000000000000000006108 106.0
BYD3_k127_2265973_4 - - - - 0.00000000000002776 77.0
BYD3_k127_2291153_0 ATP-dependent DNA helicase activity K01144,K07464,K16898 - 3.1.11.5,3.1.12.1,3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000006523 228.0
BYD3_k127_2291153_1 The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination K16899 GO:0003674,GO:0003678,GO:0003824,GO:0004003,GO:0004386,GO:0004518,GO:0004519,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016788,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032392,GO:0032508,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051276,GO:0051716,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0140097,GO:1901360 3.6.4.12 0.0000001878 60.0
BYD3_k127_2308967_0 COG2133 Glucose sorbosone dehydrogenases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002194 432.0
BYD3_k127_2308967_1 Protein of unknown function (DUF502) - - - 0.00000000000000000000000000000000000000003289 160.0
BYD3_k127_2308967_2 Citrate transporter - - - 0.000000000000000000000000000000000000005344 149.0
BYD3_k127_2308967_3 PA14 - - - 0.0000000000009717 83.0
BYD3_k127_2308967_4 pilus organization K02674,K07004 - - 0.00000001495 69.0
BYD3_k127_2323136_0 - - - - 0.0000000000000000000000000000000000000001261 154.0
BYD3_k127_2341540_0 S-adenosylmethionine-dependent methyltransferase K06969 - 2.1.1.191 0.000000000000000000000000000000000000000000000000002446 194.0
BYD3_k127_2341540_1 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03437 - - 0.00000000000000000000000000000000000000000000000004063 192.0
BYD3_k127_2341540_2 Tetratricopeptide repeat - - - 0.000000007952 59.0
BYD3_k127_2342453_0 in signal transduction K08482 - - 0.000000000000000000000000000000000000000000000000000000000000000002273 230.0
BYD3_k127_2342453_1 Psort location CytoplasmicMembrane, score K00368 - 1.7.2.1 0.000000000000000000000000000000000000000009026 173.0
BYD3_k127_2342453_2 protein conserved in bacteria - - - 0.000000000000000000000000000000000002676 143.0
BYD3_k127_2360536_0 - - - - 0.0000000000000000000000000000000000000000000000000001278 190.0
BYD3_k127_2360536_1 Amino acid permease K03294 - - 0.0000000000000000000000000000000001722 135.0
BYD3_k127_2360536_2 OsmC-like protein K07397 - - 0.00000000000000000000000000000034 128.0
BYD3_k127_2360536_3 Cupin domain - - - 0.0000000000000000000003481 103.0
BYD3_k127_2360536_4 Periplasmic Protein K08985 - - 0.00000000000000007952 88.0
BYD3_k127_2360536_5 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 - 2.1.3.3 0.000000001941 58.0
BYD3_k127_2372071_0 dUTPase K01494 - 3.5.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004577 309.0
BYD3_k127_2372071_1 Belongs to the peptidase S8 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003168 322.0
BYD3_k127_2372071_2 electron transfer flavoprotein, alpha subunit K03522 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001623 268.0
BYD3_k127_2372071_3 D-isomer specific 2-hydroxyacid dehydrogenase catalytic region K00058 - 1.1.1.399,1.1.1.95 0.0000000000000000000000000000000000000000000000000000000000000000000000000002052 265.0
BYD3_k127_2372071_4 PFAM Electron transfer flavoprotein K03521 - - 0.000000000000000000000000000000000000000000000000000000003968 208.0
BYD3_k127_2372071_5 PHP domain protein - - - 0.00000000000000000000000000000000000000000000008314 190.0
BYD3_k127_2372071_6 DegT/DnrJ/EryC1/StrS aminotransferase family K10907 - - 0.00000000000000000000000000000000001451 143.0
BYD3_k127_2372071_7 phosphatidate phosphatase activity K01096,K19302 - 3.1.3.27,3.1.3.4,3.1.3.81,3.6.1.27 0.0000000000000000004361 101.0
BYD3_k127_2372071_8 AraC-like ligand binding domain - - - 0.000000001186 70.0
BYD3_k127_2372071_9 Endonuclease I - - - 0.00000003302 67.0
BYD3_k127_2396638_0 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005092 321.0
BYD3_k127_2396638_1 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.00000000003358 73.0
BYD3_k127_2396638_2 TPR Domain containing protein K12600 - - 0.000000006159 67.0
BYD3_k127_2404388_0 cytochrome C peroxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003109 425.0
BYD3_k127_2404388_1 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002111 363.0
BYD3_k127_2404388_2 radical SAM domain protein - - - 0.00000000000000000000000000000000000000000000001375 183.0
BYD3_k127_2404388_3 PFAM Class I peptide chain release factor K15034 - - 0.00000000000000000000000000000000000002384 149.0
BYD3_k127_2404388_4 Outer membrane protein beta-barrel domain - - - 0.0000000000000000000005874 104.0
BYD3_k127_24177_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043,K13797 GO:0000428,GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0030880,GO:0032774,GO:0032991,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0061695,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990234 2.7.7.6 0.0 1503.0
BYD3_k127_24177_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046,K13797 GO:0000428,GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0030880,GO:0032774,GO:0032991,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0061695,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990234 2.7.7.6 0.0 1287.0
BYD3_k127_24177_10 P-P-bond-hydrolysis-driven protein transmembrane transporter activity K03073 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0008150,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0040007,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.00000004247 56.0
BYD3_k127_24177_2 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002174 574.0
BYD3_k127_24177_3 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 GO:0000470,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022625,GO:0022626,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004801 301.0
BYD3_k127_24177_4 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 - - 0.00000000000000000000000000000000000000000000000000000000001226 210.0
BYD3_k127_24177_5 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.00000000000000000000000000000000000000004416 156.0
BYD3_k127_24177_6 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 - - 0.00000000000000000000000000000001973 134.0
BYD3_k127_24177_7 Participates in transcription elongation, termination and antitermination K02601 GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006351,GO:0006353,GO:0006355,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016020,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0030312,GO:0031323,GO:0031326,GO:0031554,GO:0031564,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0043244,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050789,GO:0050794,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0071704,GO:0071944,GO:0080090,GO:0090304,GO:0097659,GO:1901360,GO:1901362,GO:1901576,GO:1903506,GO:2000112,GO:2001141 - 0.0000000000000000000000000000001552 125.0
BYD3_k127_24177_8 Participates in transcription elongation, termination and antitermination K02601 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006353,GO:0006355,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0031323,GO:0031326,GO:0031554,GO:0031564,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0043244,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050789,GO:0050794,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097659,GO:1901360,GO:1901362,GO:1901576,GO:1903506,GO:2000112,GO:2001141 - 0.00000000000000000000002393 102.0
BYD3_k127_2418550_0 Dienelactone hydrolase family K01061 - 3.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003801 291.0
BYD3_k127_2418550_1 NAD(P) transhydrogenase beta subunit K00325 - 1.6.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001387 289.0
BYD3_k127_2418550_2 Alanine dehydrogenase/PNT, N-terminal domain K00324 - 1.6.1.2 0.0000000000000000000000000000000000000000000009704 168.0
BYD3_k127_2418550_3 4TM region of pyridine nucleotide transhydrogenase, mitoch K00324 - 1.6.1.2 0.0000000002611 69.0
BYD3_k127_2431816_0 PFAM Glycosyl transferase, group 1 - - - 0.000000000000000000000000000000000000000000944 167.0
BYD3_k127_2431816_1 Glycosyl transferases group 1 K13668 - 2.4.1.346 0.000000000000000000000002815 117.0
BYD3_k127_2436150_0 PFAM M42 glutamyl aminopeptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006694 368.0
BYD3_k127_2436150_1 Peptidase family S49 K04773 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002105 272.0
BYD3_k127_2436150_2 Domain of unknown function (DUF4162) K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002436 276.0
BYD3_k127_2436150_3 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000001044 227.0
BYD3_k127_2436150_4 PFAM UbiA prenyltransferase K03179 - 2.5.1.39 0.00000000000000000000000000000000000000000000000000001918 211.0
BYD3_k127_2436150_5 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.00000000000000000000000000000000003961 154.0
BYD3_k127_2436150_6 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 - 2.5.1.129 0.00000000000000000000000000000000004882 141.0
BYD3_k127_2436150_8 Belongs to the UbiD family K03182 - 4.1.1.98 0.000000003511 60.0
BYD3_k127_2468936_0 Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate K01712 - 4.2.1.49 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001301 558.0
BYD3_k127_2468936_1 PFAM Amidohydrolase family K01468 - 3.5.2.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009392 405.0
BYD3_k127_2468936_2 Tetratricopeptide repeat - - - 0.000000000000000000005994 108.0
BYD3_k127_2476083_0 Belongs to the LarC family K09121 - 4.99.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000162 314.0
BYD3_k127_2476083_1 AIR carboxylase K06898 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001263 279.0
BYD3_k127_2476083_2 ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates K16786,K16787 - - 0.0000000000000000000000000000000000000000000007281 176.0
BYD3_k127_2476083_3 ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates K16784,K16786 - - 0.00000000000000000000000000000000000002522 154.0
BYD3_k127_2484125_0 PFAM aldo keto reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003167 277.0
BYD3_k127_2484125_1 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 - 2.1.1.190 0.0000000000000000000000000000000000000000000000000000000006678 218.0
BYD3_k127_2524818_0 Peptidase family M28 K01439 GO:0008150,GO:0040007 3.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003869 294.0
BYD3_k127_2535834_0 ASPIC and UnbV - - - 0.000000000000000000000000000000000000000000003374 187.0
BYD3_k127_2535834_1 COG3119 Arylsulfatase A and related enzymes - - - 0.00001301 54.0
BYD3_k127_2564042_0 Psort location CytoplasmicMembrane, score - - - 0.000000000000000000000000000000000000000000001133 190.0
BYD3_k127_2564042_1 von Willebrand factor (vWF) type A domain - - - 0.0000000000000000000000000000000000000002775 165.0
BYD3_k127_2568118_0 ATPases associated with a variety of cellular activities K02056 - 3.6.3.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002267 400.0
BYD3_k127_2568118_1 ABC transporter substrate-binding protein PnrA-like K07335 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002546 291.0
BYD3_k127_2568118_2 Branched-chain amino acid transport system / permease component K02057 - - 0.0000000000000000000000000000000000000000000000000000000000000001581 244.0
BYD3_k127_2568118_3 Branched-chain amino acid transport system / permease component K02057 - - 0.00000000000000000000000000000000000000000000000000000000000000517 229.0
BYD3_k127_2568118_4 regulation of single-species biofilm formation - - - 0.0000001112 61.0
BYD3_k127_2572754_0 Enoyl-CoA hydratase/isomerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001517 592.0
BYD3_k127_2572754_1 mechanosensitive ion channel - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004368 265.0
BYD3_k127_2572754_2 carboxylic ester hydrolase activity - - - 0.00000000000000000000000000000000000000000000000000000000003955 221.0
BYD3_k127_2572754_3 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995,K08256 - 2.4.1.345,2.7.8.5 0.0000000000000000000000000000255 122.0
BYD3_k127_2572754_4 PFAM Conserved nitrate reductase-associated protein (Nitr_red_assoc) - - - 0.00000000000002013 76.0
BYD3_k127_2581171_0 Glycosyltransferase like family 2 K00721 - 2.4.1.83 0.0000000000000000000000000000000000000000000000000000006009 203.0
BYD3_k127_2581171_1 K COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit - - - 0.000000000000000000000000000001661 130.0
BYD3_k127_2581171_2 oligosaccharyl transferase activity - - - 0.0000000000005777 81.0
BYD3_k127_2600509_0 Methylmalonyl-CoA mutase K01848 - 5.4.99.2 5.034e-206 657.0
BYD3_k127_2600509_1 Lipase maturation factor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001733 354.0
BYD3_k127_2600509_2 NYN domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002434 332.0
BYD3_k127_2600509_3 PFAM Glyoxalase bleomycin resistance protein dioxygenase K01759,K05606 - 4.4.1.5,5.1.99.1 0.00000000000000000000000000000000000006205 148.0
BYD3_k127_2600509_4 Biotin carboxylase C-terminal domain K01941,K01961 - 6.3.4.14,6.3.4.6,6.4.1.2 0.00000000000000000000000000000000009286 139.0
BYD3_k127_2600509_5 Biotin-requiring enzyme - - - 0.000000000003789 78.0
BYD3_k127_2602548_0 ATPases associated with a variety of cellular activities K02049 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000009667 253.0
BYD3_k127_2602548_1 Binding-protein-dependent transport system inner membrane component K02050,K15554 - - 0.00000000000000000000000000000000000000000000000000000001019 209.0
BYD3_k127_2602548_2 TonB-dependent receptor K02014 - - 0.000000000000000000000000000000006251 143.0
BYD3_k127_2602548_3 NMT1-like family K02051 - - 0.00000000000000000000000000001975 132.0
BYD3_k127_2603564_0 nodulation K00612 - - 5.248e-258 808.0
BYD3_k127_2603564_1 ABC transporter transmembrane K11085 - - 6.497e-256 806.0
BYD3_k127_2603564_10 Metallo-beta-lactamase superfamily K02238 - - 0.000000000000000000000002815 117.0
BYD3_k127_2603564_11 - - - - 0.0000000006653 69.0
BYD3_k127_2603564_2 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 1.036e-198 640.0
BYD3_k127_2603564_3 PFAM ABC transporter K02056 - 3.6.3.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003907 432.0
BYD3_k127_2603564_4 Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000639 402.0
BYD3_k127_2603564_5 Amino acid kinase family K00926 - 2.7.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006862 340.0
BYD3_k127_2603564_6 ABC transporter substrate-binding protein PnrA-like K07335 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000133 320.0
BYD3_k127_2603564_7 Branched-chain amino acid transport system / permease component K02057 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001932 263.0
BYD3_k127_2603564_8 Belongs to the binding-protein-dependent transport system permease family K02057 - - 0.000000000000000000000000000000000000000000000000000000000000000000000003697 266.0
BYD3_k127_2603564_9 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000002865 206.0
BYD3_k127_261027_0 Peptidase family M1 domain K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008797 479.0
BYD3_k127_261027_1 (ABC) transporter K01992 - - 0.0000000000000000000000000004787 118.0
BYD3_k127_2611133_0 transporter of a GTP-driven Fe(2 ) uptake system K04759 - - 0.00000000000000000000000000000000000000000000000000001309 198.0
BYD3_k127_2611133_1 Helix-turn-helix diphteria tox regulatory element K03709 - - 0.0000000000000000000002454 104.0
BYD3_k127_2611133_2 FeoA K04758 - - 0.000000000000004682 79.0
BYD3_k127_2612009_0 amino acid activation for nonribosomal peptide biosynthetic process K17713,K20952 - - 0.0000000000000000000000000000000000000000005834 183.0
BYD3_k127_2612009_1 diguanylate cyclase - - - 0.0000000000001385 86.0
BYD3_k127_2612009_2 lytic transglycosylase activity - - - 0.0000000003997 75.0
BYD3_k127_2619878_0 PFAM PP-loop domain protein K06864 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001045 302.0
BYD3_k127_2619878_1 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.000000000000000000000000000000000000000000000000000000000000000001331 241.0
BYD3_k127_2619878_2 Sigma factor PP2C-like phosphatases - - - 0.00000000000000000000000000000000000000000000000000000000000002989 229.0
BYD3_k127_2619878_3 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 - - 0.000000000000000000003689 100.0
BYD3_k127_2623495_0 PFAM response regulator receiver K07657 - - 0.00000000000000000000000000000000000000000000000000000000003717 214.0
BYD3_k127_2630140_0 agmatine deiminase activity K10536 - 3.5.3.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007546 517.0
BYD3_k127_2630140_1 PFAM glycosyl transferase group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004753 381.0
BYD3_k127_2630140_10 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000005524 173.0
BYD3_k127_2630140_11 PFAM O-antigen polymerase - - - 0.00000000000000000000000000000000000002886 163.0
BYD3_k127_2630140_12 Phosphotransferase enzyme family - - - 0.0000000000000000000000000000000004492 151.0
BYD3_k127_2630140_13 - - - - 0.00000000000000000000000121 117.0
BYD3_k127_2630140_14 - - - - 0.00000000000000000000008403 104.0
BYD3_k127_2630140_15 Allomyces macrogynus ATCC 38327 chlamydial polymorphic outer membrane protein - - - 0.000000000000000000009765 107.0
BYD3_k127_2630140_16 Domain of unknown function (DUF4010) - - - 0.0000000000000000001928 91.0
BYD3_k127_2630140_17 Lysin motif - - - 0.000000000000000002126 88.0
BYD3_k127_2630140_18 SLBB domain K01991 - - 0.00000000000000004282 89.0
BYD3_k127_2630140_19 Evidence 5 No homology to any previously reported sequences - - - 0.00000000000008669 85.0
BYD3_k127_2630140_2 ASPIC and UnbV - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005933 378.0
BYD3_k127_2630140_20 Glycosyl transferase, family 2 - - - 0.00000001929 67.0
BYD3_k127_2630140_21 Tetratricopeptide repeat - - - 0.00007786 55.0
BYD3_k127_2630140_3 translation release factor activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008705 344.0
BYD3_k127_2630140_4 PFAM glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001987 265.0
BYD3_k127_2630140_5 CobQ CobB MinD ParA nucleotide binding domain K16554,K16692 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000463 274.0
BYD3_k127_2630140_6 PFAM sugar transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000008125 253.0
BYD3_k127_2630140_7 - - - - 0.00000000000000000000000000000000000000000000000000000000000000166 229.0
BYD3_k127_2630140_8 Belongs to the UPF0178 family K09768 - - 0.00000000000000000000000000000000000000000000000000000008891 202.0
BYD3_k127_2630140_9 - - - - 0.0000000000000000000000000000000000000000000000000001333 200.0
BYD3_k127_2635506_0 PFAM ASPIC and UnbV - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008389 417.0
BYD3_k127_2635506_1 ASPIC and UnbV - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002166 339.0
BYD3_k127_2635506_2 pfam abc K01990,K09695 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002495 321.0
BYD3_k127_2635506_3 ABC-2 family transporter protein K09694 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000007504 260.0
BYD3_k127_2635506_4 Tetratricopeptide repeat - - - 0.00000000000003024 86.0
BYD3_k127_2635506_5 amine dehydrogenase activity K14274 - - 0.000000000007775 78.0
BYD3_k127_2637098_0 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002546 582.0
BYD3_k127_2637098_1 - - - - 0.000000001379 60.0
BYD3_k127_2640600_0 Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2) K11784 - 1.21.98.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002153 373.0
BYD3_k127_2640600_1 Protein of unknown function (DUF423) - - - 0.00000000000000000000000000000002905 130.0
BYD3_k127_2640600_2 Catalyzes the dehydration of chorismate into 3- (1- carboxyvinyl)oxy benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11782 - 4.2.1.151 0.0000000000000000000000000000427 126.0
BYD3_k127_2640600_3 4'-phosphopantetheinyl transferase superfamily K06133 - - 0.0000000000000000000006555 108.0
BYD3_k127_2640600_5 amine dehydrogenase activity K14274 - - 0.0000004173 61.0
BYD3_k127_2666263_0 PFAM asparagine synthase K01953 - 6.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009618 474.0
BYD3_k127_2666263_1 Bacterial protein of unknown function (DUF853) K06915 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002053 451.0
BYD3_k127_2666263_2 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000434 383.0
BYD3_k127_2666263_3 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain K00074 - 1.1.1.157 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002594 320.0
BYD3_k127_2666263_4 Iron-binding zinc finger CDGSH type - - - 0.0000000000000000006177 91.0
BYD3_k127_2666263_5 4 iron, 4 sulfur cluster binding - - - 0.000000000000001251 91.0
BYD3_k127_2666263_6 - - - - 0.000008875 59.0
BYD3_k127_2666263_7 cellulase activity K01178,K14645,K18546 - 3.2.1.3 0.0001068 55.0
BYD3_k127_2687187_0 Delta-aminolevulinic acid dehydratase K01698 GO:0003674,GO:0003824,GO:0004655,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009987,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0043167,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.2.1.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004292 325.0
BYD3_k127_2687187_1 Belongs to the precorrin methyltransferase family K13542 - 2.1.1.107,4.2.1.75 0.000000000000000000000000000000000000000000000000005272 192.0
BYD3_k127_2687187_2 Aminotransferase class-III K01845 - 5.4.3.8 0.000000000000000000000000000000002471 138.0
BYD3_k127_2698610_0 UDP-4-amino-4-deoxy-L-arabinose aminotransferase K13010,K13327 - 1.1.1.384,2.6.1.102 0.0000000000000000000000000000000000000001549 172.0
BYD3_k127_2698610_1 transferase activity, transferring glycosyl groups - - - 0.00000000000000004243 94.0
BYD3_k127_2698610_2 Acetyltransferase (GNAT) domain - - - 0.000000000004421 75.0
BYD3_k127_2713894_0 - - - - 0.0000000000000000000000000000000000000344 154.0
BYD3_k127_2713894_2 PFAM Photosynthetic reaction centre cytochrome C subunit K13992 - - 0.0000000005748 71.0
BYD3_k127_2713894_3 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 - 6.3.4.4 0.0000003975 53.0
BYD3_k127_2713894_4 - - - - 0.00007828 46.0
BYD3_k127_2729220_0 succinate dehydrogenase, flavoprotein subunit K00239 GO:0000104,GO:0000166,GO:0001539,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006091,GO:0006113,GO:0006928,GO:0006950,GO:0006974,GO:0006996,GO:0008150,GO:0008152,GO:0009055,GO:0009061,GO:0009987,GO:0015980,GO:0016020,GO:0016043,GO:0016491,GO:0016627,GO:0022607,GO:0022900,GO:0030030,GO:0030031,GO:0032991,GO:0033554,GO:0036094,GO:0040011,GO:0043167,GO:0043168,GO:0044085,GO:0044237,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0044780,GO:0044781,GO:0045273,GO:0045274,GO:0045283,GO:0045284,GO:0045333,GO:0048037,GO:0048870,GO:0050660,GO:0050662,GO:0050896,GO:0051179,GO:0051674,GO:0051716,GO:0055114,GO:0070469,GO:0070470,GO:0070925,GO:0071840,GO:0071944,GO:0071949,GO:0071973,GO:0097159,GO:0097588,GO:0098796,GO:0098797,GO:0098803,GO:1901265,GO:1901363 1.3.5.1,1.3.5.4 2.7e-211 664.0
BYD3_k127_2729220_1 Major facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005658 421.0
BYD3_k127_2729220_2 TIGRFAM succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 - 1.3.5.1,1.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001216 327.0
BYD3_k127_2729220_3 membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002907 264.0
BYD3_k127_2729220_4 PFAM fumarate reductase succinate dehydrogenase flavoprotein K00239,K00278 GO:0000104,GO:0000166,GO:0001539,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006091,GO:0006113,GO:0006928,GO:0006950,GO:0006974,GO:0006996,GO:0008150,GO:0008152,GO:0009055,GO:0009061,GO:0009987,GO:0015980,GO:0016020,GO:0016043,GO:0016491,GO:0016627,GO:0022607,GO:0022900,GO:0030030,GO:0030031,GO:0032991,GO:0033554,GO:0036094,GO:0040011,GO:0043167,GO:0043168,GO:0044085,GO:0044237,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0044780,GO:0044781,GO:0045273,GO:0045274,GO:0045283,GO:0045284,GO:0045333,GO:0048037,GO:0048870,GO:0050660,GO:0050662,GO:0050896,GO:0051179,GO:0051674,GO:0051716,GO:0055114,GO:0070469,GO:0070470,GO:0070925,GO:0071840,GO:0071944,GO:0071949,GO:0071973,GO:0097159,GO:0097588,GO:0098796,GO:0098797,GO:0098803,GO:1901265,GO:1901363 1.3.5.1,1.3.5.4,1.4.3.16 0.0000000000000000000000000005497 119.0
BYD3_k127_2729220_5 domain, Protein - - - 0.0005693 43.0
BYD3_k127_2753201_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 4.71e-240 752.0
BYD3_k127_2753201_1 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 - - 0.0000000000000000000000000000000000000000000000000000000000002307 214.0
BYD3_k127_2753201_2 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000005182 208.0
BYD3_k127_2767657_0 4Fe-4S binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002053 482.0
BYD3_k127_2767657_1 NUDIX domain - - - 0.000000000000000000000000000000000000000000000004007 181.0
BYD3_k127_2767657_2 cellular component assembly K01426,K16531 - 3.5.1.4 0.0000005268 55.0
BYD3_k127_2769396_0 COG2931 RTX toxins and related Ca2 -binding proteins - - - 0.000000000000000000000000000000000000000000000000002002 200.0
BYD3_k127_2769396_1 Endonuclease/Exonuclease/phosphatase family K01142 - 3.1.11.2 0.000000000000000000000000000000000000000003603 160.0
BYD3_k127_2769396_2 Belongs to the ompA family K03286 GO:0005575,GO:0005623,GO:0009279,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0044462,GO:0044464,GO:0071944 - 0.0000000000000001063 88.0
BYD3_k127_2788339_0 Heme copper-type cytochrome quinol oxidase, subunit K02276 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001092 286.0
BYD3_k127_2788339_1 PFAM Acetyltransferase (GNAT) family K00657 - 2.3.1.57 0.00000000000000000000000000000000000000000000000000002049 191.0
BYD3_k127_2788339_2 Cytochrome c oxidase subunit III K02276 - 1.9.3.1 0.00000000000000000000000009828 115.0
BYD3_k127_2788339_3 Prokaryotic Cytochrome C oxidase subunit IV K02277 - 1.9.3.1 0.000000000000000000989 92.0
BYD3_k127_2788339_4 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 - 1.9.3.1 0.00000000000005072 72.0
BYD3_k127_2791138_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 9.71e-210 681.0
BYD3_k127_2791138_1 PFAM phosphoesterase, RecJ domain protein K07462 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004135 439.0
BYD3_k127_2791138_2 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 - - 0.00000000000000000000000000000000006673 136.0
BYD3_k127_2791138_3 Ribonuclease H K03469 - 3.1.26.4 0.00000000000000000000000003562 111.0
BYD3_k127_2791138_4 Belongs to the multicopper oxidase YfiH RL5 family K05810 GO:0003674,GO:0003824,GO:0005488,GO:0005507,GO:0005515,GO:0008150,GO:0008152,GO:0016491,GO:0016679,GO:0016682,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0046872,GO:0046914,GO:0046983,GO:0055114 - 0.00000000000000000000000008313 120.0
BYD3_k127_2829615_0 PFAM HNH endonuclease - - - 0.000000000000000000000000000000000000000000000000000000005471 205.0
BYD3_k127_2829615_1 OmpA family - - - 0.000000000000000000000000000000000000000000000195 182.0
BYD3_k127_2829615_2 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.00003416 55.0
BYD3_k127_2829615_3 Tetratricopeptide repeat - - - 0.000326 52.0
BYD3_k127_2830131_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 4.64e-265 832.0
BYD3_k127_2830131_1 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.0000000000000000000000000000000000000000000000000000000000000001865 232.0
BYD3_k127_2830131_2 Belongs to the NadC ModD family K00767 - 2.4.2.19 0.0000000000000000000000000000000000000000000000000000000005067 213.0
BYD3_k127_2830131_3 Biotin/lipoate A/B protein ligase family K03524 - 6.3.4.15 0.00000000000000000000000000000000001128 154.0
BYD3_k127_2843625_0 radical SAM domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002123 462.0
BYD3_k127_2843625_1 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001135 411.0
BYD3_k127_2843625_2 Subtilase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002949 381.0
BYD3_k127_2843625_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003818 317.0
BYD3_k127_2843625_4 Membrane dipeptidase (Peptidase family M19) K01273 - 3.4.13.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007263 297.0
BYD3_k127_2843625_5 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.0000000000000000000000000000000000000000000003766 170.0
BYD3_k127_2843625_6 Methyltransferase domain - - - 0.0000000000000000000000000000000001658 141.0
BYD3_k127_2843625_7 - - - - 0.0000000000000000000000002369 114.0
BYD3_k127_2843625_8 protein heterodimerization activity - - - 0.000000000000000004059 85.0
BYD3_k127_2845038_0 Transketolase, thiamine diphosphate binding domain K00615 - 2.2.1.1 5.888e-208 665.0
BYD3_k127_2845038_1 Deoxyhypusine synthase K00809 - 2.5.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001876 370.0
BYD3_k127_2845038_2 Uracil DNA glycosylase superfamily K21929 - 3.2.2.27 0.0000000000000000000000000000000000000000000000000000000000000000000000003177 253.0
BYD3_k127_2845038_3 phosphoserine phosphatase activity K07315 - 3.1.3.3 0.000000000000000000000000000000000000000000000000000004988 206.0
BYD3_k127_2845038_4 PFAM Sulfate transporter antisigma-factor antagonist STAS K04749 - - 0.0000000000000009281 83.0
BYD3_k127_2845038_5 - - - - 0.000000000004499 72.0
BYD3_k127_2845038_6 sigma factor antagonist activity K04757 - 2.7.11.1 0.00000000007111 70.0
BYD3_k127_2872798_0 synthetase (ADP forming), alpha K01905,K09181,K22224 - 6.2.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000597 633.0
BYD3_k127_2872798_1 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009106,GO:0009107,GO:0009108,GO:0009249,GO:0009987,GO:0010467,GO:0016053,GO:0016740,GO:0016782,GO:0016783,GO:0016992,GO:0018065,GO:0018130,GO:0018193,GO:0018205,GO:0019538,GO:0019752,GO:0032787,GO:0036211,GO:0040007,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0051604,GO:0070283,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901576 2.8.1.8 0.0000000000000000000000000000002693 126.0
BYD3_k127_2872798_2 Low affinity iron permease - - - 0.000000000000000001558 87.0
BYD3_k127_2872798_3 Low affinity iron permease - - - 0.000000000000000002386 92.0
BYD3_k127_2872798_4 - - - - 0.0000000000002624 70.0
BYD3_k127_2872798_5 Evidence 4 Homologs of previously reported genes of - - - 0.00007547 49.0
BYD3_k127_2891078_0 E1-E2 ATPase K17686 - 3.6.3.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008604 621.0
BYD3_k127_2891078_1 Belongs to the bacterial solute-binding protein 9 family K02077,K09815,K09818 - - 0.000000000000000000000000000000000000000000000008394 182.0
BYD3_k127_2891078_2 ABC 3 transport family K02075 - - 0.000000000000000000000000000000000000000000001094 177.0
BYD3_k127_2891078_3 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K02945,K03527 - 1.17.7.4 0.000000000000000000000000000000000000000000008727 176.0
BYD3_k127_2891078_4 Tetratricopeptide repeat protein - - - 0.0000000000000000000000000000000000000001161 169.0
BYD3_k127_2891078_5 - - - - 0.000000000000003554 86.0
BYD3_k127_2891078_6 - - - - 0.000000000002284 79.0
BYD3_k127_2891078_7 phosphate-selective porin O and P - - - 0.000000000002808 78.0
BYD3_k127_289938_0 TonB-dependent receptor K02014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005294 556.0
BYD3_k127_289938_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004477 499.0
BYD3_k127_289938_2 2Fe-2S iron-sulfur cluster binding domain K00240 - 1.3.5.1,1.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005285 314.0
BYD3_k127_289938_3 Domain of unknown function (DUF4154) - - - 0.0000000000000000000000001825 123.0
BYD3_k127_2906684_0 s1 p1 nuclease - - - 0.00000000000000000000000000000000000000000000288 177.0
BYD3_k127_2906684_1 SAM-dependent methyltransferase - - - 0.00000000000000000000000000000000000000004464 167.0
BYD3_k127_2906684_2 nucleotide catabolic process - - - 0.00000000000000000000000000000007849 139.0
BYD3_k127_2906684_3 Involved in bacillithiol (BSH) biosynthesis. May catalyze the last step of the pathway, the addition of cysteine to glucosamine malate (GlcN-Mal) to generate BSH K22136 - - 0.000000000000000000001896 106.0
BYD3_k127_2906684_4 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K07713 - - 0.000000000000000000379 98.0
BYD3_k127_2906684_5 Histidine kinase - - - 0.00000000000575 76.0
BYD3_k127_2907359_0 AAA domain - - - 0.0000063 57.0
BYD3_k127_2907359_1 Putative peptidoglycan binding domain - - - 0.0001807 54.0
BYD3_k127_2962871_0 HAD superfamily (subfamily IG) hydrolase 5'-Nucleotidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002743 370.0
BYD3_k127_2962871_1 Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate K01807 - 5.3.1.6 0.0000000000000000000000000000000000000000000000000000007867 208.0
BYD3_k127_2962871_2 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K02806 - - 0.000000000000000000000000001165 124.0
BYD3_k127_2962871_3 metal-dependent hydrolase with the TIM-barrel fold - - - 0.0000000000000000000001406 103.0
BYD3_k127_2973122_0 Tetratricopeptide repeat - - - 0.0000000000000000000000000000001167 143.0
BYD3_k127_2973122_1 Amidohydrolase family K01465 - 3.5.2.3 0.000000000002353 69.0
BYD3_k127_2975082_0 PAS domain K13924 - 2.1.1.80,3.1.1.61 2.09e-205 670.0
BYD3_k127_2975082_1 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007412 289.0
BYD3_k127_2975082_2 PFAM Alpha beta hydrolase fold-1 - - - 0.00000000000000000000000000000000000000000000000000007941 196.0
BYD3_k127_2975082_3 glyoxalase bleomycin resistance protein dioxygenase K06996 - - 0.0000000000000005323 81.0
BYD3_k127_297708_0 ATP:ADP antiporter activity K01932,K03301 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004197 354.0
BYD3_k127_297708_1 Protein kinase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000009953 266.0
BYD3_k127_297708_2 Belongs to the UPF0337 (CsbD) family - - - 0.000000000000000000000000002759 112.0
BYD3_k127_298017_0 Sigma-54 interaction domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002813 428.0
BYD3_k127_298017_1 Histidine kinase K13598 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000006393 209.0
BYD3_k127_298017_2 surface antigen - - - 0.00000000000000000000000000000000002408 155.0
BYD3_k127_298017_3 Glycogen recognition site of AMP-activated protein kinase - - - 0.00000002327 67.0
BYD3_k127_2988604_0 Bacterial Ig-like domain 2 - - - 0.0003587 53.0
BYD3_k127_2991882_0 pyrroloquinoline quinone binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001516 334.0
BYD3_k127_2991882_1 Evidence 5 No homology to any previously reported sequences - - - 0.000001034 60.0
BYD3_k127_3027765_0 N-terminal domain of (some) glycogen debranching enzymes - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000181 530.0
BYD3_k127_3027765_1 Enoyl-(Acyl carrier protein) reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004997 418.0
BYD3_k127_3027765_2 imidazolonepropionase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002789 310.0
BYD3_k127_3027765_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000005052 234.0
BYD3_k127_3027765_4 Serine aminopeptidase, S33 K06889,K07397 - - 0.00000000000000000000000000000000000000000000000007797 191.0
BYD3_k127_3031436_0 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001712 559.0
BYD3_k127_3031436_1 Uncharacterized protein family (UPF0051) K09015 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001513 355.0
BYD3_k127_3031436_2 NifU-like N terminal domain K04488 - - 0.00000000000000000000000000000000000000000000000006271 181.0
BYD3_k127_3038916_0 COG3119 Arylsulfatase A K01138 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004773 398.0
BYD3_k127_3038916_1 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity - - - 0.0000000000000000000000000000000000000000000000000000000000001114 217.0
BYD3_k127_3038916_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000001899 148.0
BYD3_k127_3038916_3 BON domain - - - 0.0000000000000000009491 95.0
BYD3_k127_3038916_4 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710 - 4.2.1.46 0.0000001789 52.0
BYD3_k127_3075230_0 Peptidase M16 - - - 5.501e-213 697.0
BYD3_k127_3075230_1 PFAM FAD linked oxidase domain protein K00102,K00104 - 1.1.2.4,1.1.3.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005405 477.0
BYD3_k127_3075230_2 3'(2'),5'-bisphosphate nucleotidase K01082 - 3.1.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002909 360.0
BYD3_k127_3075230_3 4Fe-4S dicluster domain K11473 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002261 337.0
BYD3_k127_3075230_4 Glucose / Sorbosone dehydrogenase - - - 0.0000000000000000000000000000000000000000000000001327 196.0
BYD3_k127_3075230_5 YceI-like domain - - - 0.000000002759 66.0
BYD3_k127_3121805_0 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source K01916 - 6.3.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000763 297.0
BYD3_k127_3121805_1 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005324 286.0
BYD3_k127_3121805_2 Threonine aldolase K01620 - 4.1.2.48 0.000000000000000000000000000000000000000000000000000000000001034 216.0
BYD3_k127_3121805_3 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 GO:0000154,GO:0000451,GO:0000453,GO:0001510,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 2.1.1.198 0.0000000000000000000000000000000000000000000000000000000001663 216.0
BYD3_k127_3121805_4 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 - 2.7.4.9 0.00000000000000000000000000000000000000000000000000001185 194.0
BYD3_k127_3150518_0 Protein of unknown function (DUF1349) K01183 - 3.2.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001155 411.0
BYD3_k127_3150518_1 serine-type peptidase activity K04773 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002578 374.0
BYD3_k127_3150518_2 domain, Protein - - - 0.0000000000000000000000000000000000000000000000000122 205.0
BYD3_k127_3150518_3 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 - 3.2.2.23,4.2.99.18 0.00000000000000000000000000000000000000000007305 170.0
BYD3_k127_3150518_4 - - - - 0.00000000000000000000000001134 124.0
BYD3_k127_3150518_5 YceI-like domain - - - 0.000000000000000000002597 103.0
BYD3_k127_3155781_0 Bacterial membrane protein, YfhO - - - 0.000000000000000000000000000000000000000000000000000001782 211.0
BYD3_k127_3155781_1 PFAM lipopolysaccharide biosynthesis - - - 0.000000000000000000000000000000000000000000003057 181.0
BYD3_k127_3155781_2 ADP-heptose-lipopolysaccharide heptosyltransferase activity K02527,K02841,K12982 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.0004343 52.0
BYD3_k127_3174209_0 ABC transporter K02021,K06147,K06148,K11085 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000117 505.0
BYD3_k127_3174209_1 PFAM glycosyl transferase family 9 K02843 - - 0.000000000001116 82.0
BYD3_k127_3174209_2 PFAM glycosyl transferase family 9 - - - 0.0001256 54.0
BYD3_k127_321307_0 Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg- protoporphyrin IX K03405 - 6.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004657 588.0
BYD3_k127_321307_1 KR domain K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000003977 224.0
BYD3_k127_321307_2 ASPIC and UnbV - - - 0.00000000000000000000000000000000000000000000000000000000000006293 235.0
BYD3_k127_321307_3 von Willebrand factor (vWF) type A domain - - - 0.0000000000000000000000000000000000000002463 157.0
BYD3_k127_321307_4 Subtilase family - - - 0.0000000000000000000000000000000000000006897 165.0
BYD3_k127_321307_5 chaperone-mediated protein folding - - - 0.000000000000000000000000000005272 135.0
BYD3_k127_3213552_0 Belongs to the sulfate adenylyltransferase family K00958 - 2.7.7.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001122 479.0
BYD3_k127_3213552_1 Polysaccharide export protein K01991 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003029 467.0
BYD3_k127_3213552_2 Chromatin associated protein KTI12 - - - 0.00000000000000000000000000000008357 127.0
BYD3_k127_32331_0 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase K00261,K00262 - 1.4.1.3,1.4.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009816 607.0
BYD3_k127_32331_1 6-phospho-beta-galactosidase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000475 460.0
BYD3_k127_3248231_0 arylsulfatase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000087 350.0
BYD3_k127_3248231_1 ADP-heptose-lipopolysaccharide heptosyltransferase activity K02843 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001354 305.0
BYD3_k127_3248231_2 PFAM GGDEF domain containing protein - - - 0.0000000000000000000000000000000000000000000002569 186.0
BYD3_k127_3248231_3 peroxiredoxin activity - - - 0.0000000000000000000000000000006172 133.0
BYD3_k127_3248231_4 - - - - 0.000000000000002237 91.0
BYD3_k127_3249816_0 ATP-dependent DNA helicase activity K01144,K07464,K16898 - 3.1.11.5,3.1.12.1,3.6.4.12 0.0000000000000000000000000000000000000000000001366 190.0
BYD3_k127_325481_0 cell septum assembly - - - 0.0000000000000000000000000000000000000000000000434 184.0
BYD3_k127_325481_1 protein related to plant photosystem II stability assembly factor - - - 0.0000000000000000000000000000008127 141.0
BYD3_k127_3276651_0 Catalyzes the biosynthesis of agmatine from arginine K01585 - 4.1.1.19 7.889e-210 672.0
BYD3_k127_3276651_1 Carbon-nitrogen hydrolase K03820 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002322 263.0
BYD3_k127_3284133_0 SpoIVB peptidase S55 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002814 297.0
BYD3_k127_3284133_1 Tetratricopeptide repeat - - - 0.000000000000000000000000000009934 124.0
BYD3_k127_3284695_0 C-terminus of AA_permease K03294 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007682 396.0
BYD3_k127_3284695_1 Sigma-70 region 2 K03088 GO:0001101,GO:0005575,GO:0005623,GO:0005886,GO:0006355,GO:0008150,GO:0009410,GO:0009415,GO:0009628,GO:0009889,GO:0009891,GO:0009893,GO:0010035,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016020,GO:0019219,GO:0019222,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0042221,GO:0044464,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0071944,GO:0080090,GO:1901700,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141 - 0.000000000003112 75.0
BYD3_k127_3284695_2 - - - - 0.0000000003384 66.0
BYD3_k127_3284695_3 Domain of unknown function (DUF4412) - - - 0.0000000005462 70.0
BYD3_k127_3291569_0 Endonuclease/Exonuclease/phosphatase family - - - 0.000000000000000000000000000000000000000000000000000001665 214.0
BYD3_k127_3291569_1 Evidence 5 No homology to any previously reported sequences - - - 0.000000005629 69.0
BYD3_k127_3304913_0 Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA K01610 - 4.1.1.49 1.188e-221 703.0
BYD3_k127_3304913_1 Major facilitator Superfamily K08162,K08226,K16211 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005019 319.0
BYD3_k127_3317857_0 Propeptide_C25 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005158 469.0
BYD3_k127_3317857_1 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962,K01963 - 2.1.3.15,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002611 392.0
BYD3_k127_3317857_2 DNA polymerase III alpha subunit K02337 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003318 381.0
BYD3_k127_3317857_3 Evidence 5 No homology to any previously reported sequences K17713 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008878 342.0
BYD3_k127_3317857_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000001653 265.0
BYD3_k127_3317857_5 Exopolysaccharide biosynthesis protein YbjH - - - 0.000000000000000000000000000000000000000000000297 177.0
BYD3_k127_3317857_6 amine dehydrogenase activity - - - 0.0000000000000000000000000000000003024 149.0
BYD3_k127_3317857_7 long-chain fatty acid transport protein - - - 0.000000000000000000000000000000005851 141.0
BYD3_k127_3317857_8 - - - - 0.00000000000000000005191 101.0
BYD3_k127_3321148_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 GO:0003674,GO:0003824,GO:0004360,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006002,GO:0006040,GO:0006047,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0016740,GO:0016769,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.6.1.16 1.964e-244 788.0
BYD3_k127_3321148_1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III K01840,K03431,K15778 - 5.4.2.10,5.4.2.2,5.4.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001216 368.0
BYD3_k127_3321148_2 Belongs to the NAD(P)-dependent epimerase dehydratase family K01784 - 5.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002339 360.0
BYD3_k127_3321148_3 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001515 325.0
BYD3_k127_3321148_4 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.00000000000000000000000000000000000000000000000007759 187.0
BYD3_k127_3321148_5 Endoribonuclease L-PSP K09022 - 3.5.99.10 0.00000000000000000000000000000000000000001887 156.0
BYD3_k127_3321148_6 Bacterial membrane protein, YfhO - - - 0.00000000000000000000000000000000000000003278 175.0
BYD3_k127_3321148_7 - - - - 0.0000161 54.0
BYD3_k127_3321148_8 - - - - 0.0001278 45.0
BYD3_k127_3357939_0 lysine biosynthetic process via aminoadipic acid - - - 1.878e-279 885.0
BYD3_k127_3357939_1 Domain of unknown function (DUF4382) - - - 0.00000000000000000000000000000000000000001514 166.0
BYD3_k127_3357939_2 domain, Protein K15125,K19231 - - 0.000000000000000000000000000000002958 141.0
BYD3_k127_3357939_3 - - - - 0.00000000000000000000005019 104.0
BYD3_k127_3358618_0 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008614,GO:0008615,GO:0009058,GO:0009110,GO:0009987,GO:0016740,GO:0016769,GO:0017144,GO:0018130,GO:0019438,GO:0033856,GO:0034641,GO:0042364,GO:0042816,GO:0042819,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072524,GO:0072525,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 2.6.99.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004967 282.0
BYD3_k127_3358618_1 Divergent polysaccharide deacetylase K09798 - - 0.0000000000000000000000000000007391 139.0
BYD3_k127_3358618_2 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072,K12257 - - 0.000000000000000000000000000005926 128.0
BYD3_k127_3360393_0 cell adhesion involved in biofilm formation K20276 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001301 539.0
BYD3_k127_3360393_1 serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001297 501.0
BYD3_k127_336682_0 WD40 domain protein beta Propeller K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003043 347.0
BYD3_k127_336682_1 Belongs to the folylpolyglutamate synthase family K11754 - 6.3.2.12,6.3.2.17 0.00000000000000000000000000000000000000000000000000000000000000006748 240.0
BYD3_k127_336682_2 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella - - - 0.0000000000000000000000000000000000000000000000006343 191.0
BYD3_k127_336682_3 protein secretion - - - 0.000000000008636 77.0
BYD3_k127_336682_4 4Fe-4S single cluster domain K06871 - - 0.0003521 45.0
BYD3_k127_3381309_0 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002306 359.0
BYD3_k127_3381309_1 Belongs to the peptidase S8 family K01337,K01387,K05994,K08604,K14645,K20276 - 3.4.11.10,3.4.21.50,3.4.24.25,3.4.24.3 0.0002009 46.0
BYD3_k127_3396656_0 PFAM Permease for cytosine purines, uracil, thiamine, allantoin K03457 - - 1.308e-200 634.0
BYD3_k127_3396656_1 Putative esterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007309 275.0
BYD3_k127_3396656_2 Barrel-sandwich domain of CusB or HlyD membrane-fusion K02005 - - 0.000000000000000000000000000000000000000000000000000000000000001301 233.0
BYD3_k127_3396656_3 ATPases associated with a variety of cellular activities K02003 - - 0.0000000000000000000000611 108.0
BYD3_k127_340138_0 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001467 373.0
BYD3_k127_340138_1 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.000000000000000000000000000000000000001112 153.0
BYD3_k127_340138_2 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 GO:0003674,GO:0003824,GO:0004479,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006413,GO:0006464,GO:0006518,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0016742,GO:0019538,GO:0019988,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036211,GO:0043043,GO:0043170,GO:0043412,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0046483,GO:0071704,GO:0071951,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.1.2.9 0.00000000000000000000000000361 120.0
BYD3_k127_340138_3 Preprotein translocase, YajC K03210 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0031522,GO:0032991,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.00000000000000000000000742 106.0
BYD3_k127_3515615_0 Catalyzes the oxidation of either pyridoxine 5'- phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP) K00275 - 1.4.3.5 0.0000000000000000000000000000000000000000000000000000000000000009257 224.0
BYD3_k127_3515615_1 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000003807 176.0
BYD3_k127_3515615_2 thiolester hydrolase activity K01179,K06889,K10773,K15853 - 3.2.1.4,4.2.99.18 0.0000000000000000000000000000002529 128.0
BYD3_k127_3517073_0 ATP dependent DNA ligase C terminal region K01971 - 6.5.1.1 2.232e-267 853.0
BYD3_k127_3517073_1 response regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005575 510.0
BYD3_k127_3517073_10 Domain of unknown function (DUF4976) K01565 GO:0000323,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005764,GO:0005773,GO:0005775,GO:0006022,GO:0006026,GO:0006027,GO:0006029,GO:0006516,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009100,GO:0009987,GO:0016250,GO:0016787,GO:0016826,GO:0019538,GO:0030163,GO:0030167,GO:0030200,GO:0030201,GO:0030203,GO:0031974,GO:0043170,GO:0043202,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044422,GO:0044424,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0070013,GO:0071704,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575 3.10.1.1 0.00000002635 58.0
BYD3_k127_3517073_2 virion core protein (lumpy skin disease virus) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001275 426.0
BYD3_k127_3517073_3 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007444 274.0
BYD3_k127_3517073_4 arylsulfatase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000009921 254.0
BYD3_k127_3517073_5 Domain of unknown function (DUF892) - - - 0.0000000000000000000000000000000000000002464 168.0
BYD3_k127_3517073_6 Transcription factor zinc-finger K09981 - - 0.00000000000000000000000000004408 130.0
BYD3_k127_3517073_7 Response regulator, receiver K02485 - - 0.000000000000006419 78.0
BYD3_k127_3519248_0 histidine kinase, HAMP K13598 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000009444 222.0
BYD3_k127_3519248_1 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072,K03074,K12257 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008150,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0033036,GO:0042886,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944 - 0.00000000000000000000000000000000001093 139.0
BYD3_k127_3519248_2 Belongs to the peptidase S8 family K08651 - 3.4.21.66 0.0000002713 57.0
BYD3_k127_3550609_0 Amino acid permease K03294 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002333 279.0
BYD3_k127_3550609_1 ABC transporter K01990,K09697 - 3.6.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000002493 277.0
BYD3_k127_3550609_2 COG1668 ABC-type Na efflux pump, permease component K01992,K09696 - - 0.000000000000000000000000006424 126.0
BYD3_k127_3550609_3 ABC-2 family transporter protein K09696 - - 0.000001781 58.0
BYD3_k127_3560742_0 ATP:ADP antiporter activity K03301 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000159 377.0
BYD3_k127_3560742_1 Belongs to the peptidase M24B family K01262 - 3.4.11.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005037 349.0
BYD3_k127_3560742_2 Multidrug transporter - - - 0.000000000000000000000000000000000000000000000000002196 195.0
BYD3_k127_3560742_3 - - - - 0.00000000000000001874 91.0
BYD3_k127_3560742_4 Dienelactone hydrolase family K01061 - 3.1.1.45 0.0000003248 52.0
BYD3_k127_3575324_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 1.848e-244 794.0
BYD3_k127_3575324_1 PFAM Prolyl oligopeptidase family - - - 5.759e-199 642.0
BYD3_k127_3575324_2 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008253 425.0
BYD3_k127_3575324_3 GlutRNAGln amidotransferase subunit D K01424 - 3.5.1.1 0.0000000000000000000000000000000000000000000000000000000000001846 218.0
BYD3_k127_3575324_4 DinB family - - - 0.000000000000000000000000000000000000000000531 171.0
BYD3_k127_3575324_5 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.00000000000000000000000000000000000009844 160.0
BYD3_k127_3575324_6 Acyl carrier protein phosphodiesterase - - - 0.000000155 57.0
BYD3_k127_3580077_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005226 453.0
BYD3_k127_3580077_1 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002243 307.0
BYD3_k127_3580077_2 O-methyltransferase - - - 0.0000000000000000000000000000004045 124.0
BYD3_k127_3580077_3 6-O-methylguanine DNA methyltransferase, DNA binding domain K00567,K10778,K13531 GO:0003674,GO:0003824,GO:0003908,GO:0006139,GO:0006259,GO:0006281,GO:0006304,GO:0006307,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008168,GO:0008172,GO:0009987,GO:0016740,GO:0016741,GO:0032259,GO:0033554,GO:0034641,GO:0035510,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:1901360 2.1.1.63 0.00000000000000000000004869 115.0
BYD3_k127_3580077_4 Tyrosine recombinase XerD K04763 GO:0008150,GO:0040007 - 0.000000000000000005276 95.0
BYD3_k127_3580077_5 rRNA binding K02968 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0004857,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008073,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030234,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042274,GO:0042979,GO:0043043,GO:0043086,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044092,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0050790,GO:0065003,GO:0065007,GO:0065009,GO:0070181,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:0098772,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000322 69.0
BYD3_k127_3582115_0 ATP dependent DNA ligase domain protein K01971 - 6.5.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002096 591.0
BYD3_k127_3582115_1 glucose-6-phosphate dehydrogenase activity K00036 - 1.1.1.363,1.1.1.49 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002286 592.0
BYD3_k127_3582115_10 PFAM Pterin 4 alpha carbinolamine dehydratase K01724 - 4.2.1.96 0.00000000000000000000000000000000000000001601 158.0
BYD3_k127_3582115_11 GDP-mannose mannosyl hydrolase activity K03574 - 3.6.1.55 0.0000000000000000000000000000000001135 142.0
BYD3_k127_3582115_2 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro) K01881 GO:0003674,GO:0003824,GO:0004812,GO:0004827,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006433,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017101,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007907 572.0
BYD3_k127_3582115_3 ATP dependent DNA ligase C terminal region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006211 505.0
BYD3_k127_3582115_4 6-phosphogluconate dehydrogenase K00033 - 1.1.1.343,1.1.1.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008893 417.0
BYD3_k127_3582115_5 TIGRFAM chromate transporter, chromate ion transporter (CHR) family K07240 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002364 378.0
BYD3_k127_3582115_6 PFAM Rhomboid family protein K07059 - - 0.000000000000000000000000000000000000000000000000000000000000000002482 238.0
BYD3_k127_3582115_7 converts alpha-aldose to the beta-anomer - - - 0.0000000000000000000000000000000000000000000000000000000000000007092 233.0
BYD3_k127_3582115_8 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase K01057 - 3.1.1.31 0.0000000000000000000000000000000000000000000000002602 189.0
BYD3_k127_3582115_9 - - - - 0.00000000000000000000000000000000000000000000001595 179.0
BYD3_k127_358666_0 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003468 293.0
BYD3_k127_358666_1 COGs COG0577 ABC-type antimicrobial peptide transport system permease component K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000475 270.0
BYD3_k127_358666_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005,K15727 - - 0.000000000000000000000000000000000000000000000000000000000000005826 233.0
BYD3_k127_358666_3 proline dipeptidase activity - - - 0.00000000000000000000000000000000000000000000000000000000000002735 222.0
BYD3_k127_358666_4 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00000000000000000000000000000000000000000000005391 193.0
BYD3_k127_358666_5 Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP- ribose 1''-2''-cyclic phosphate (APPR P). May function as an ADP- ribosylase K07559 - - 0.00000000000000000000000000000002521 135.0
BYD3_k127_358666_6 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.00000000000000000000008753 114.0
BYD3_k127_358666_7 Metallopeptidase family M24 - - - 0.0000166 52.0
BYD3_k127_3603413_0 oligopeptide transporter, OPT family - - - 2.167e-235 751.0
BYD3_k127_3603413_1 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity K07456 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007517 520.0
BYD3_k127_3603413_2 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002227 329.0
BYD3_k127_3603413_3 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007377 288.0
BYD3_k127_3603413_4 Transcriptional regulator, BadM Rrf2 family K13643 - - 0.00000000000000000000000000000002608 133.0
BYD3_k127_3619163_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005803 528.0
BYD3_k127_3619163_1 C-terminal, D2-small domain, of ClpB protein K03667 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000397 507.0
BYD3_k127_3619163_2 Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs K04094 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 2.1.1.74 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006306 434.0
BYD3_k127_3619163_3 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 GO:0000166,GO:0000287,GO:0000502,GO:0003674,GO:0003824,GO:0004175,GO:0004298,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006807,GO:0006950,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009266,GO:0009376,GO:0009408,GO:0009628,GO:0009987,GO:0016043,GO:0016787,GO:0017076,GO:0019538,GO:0019904,GO:0022607,GO:0030163,GO:0030554,GO:0031597,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0034214,GO:0035639,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046872,GO:0050896,GO:0051259,GO:0051603,GO:0065003,GO:0070003,GO:0070011,GO:0071704,GO:0071840,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1902494,GO:1904949,GO:1905368,GO:1905369 3.4.25.2 0.000000000000000000000000000000000000000000000000000000001126 220.0
BYD3_k127_3619163_4 Tyrosine recombinase XerD K04763 - - 0.0000000000000000000000000000000000000000000000000002797 199.0
BYD3_k127_3619163_5 Bacterial Ig-like domain K07156 - - 0.00000000000004531 82.0
BYD3_k127_3622847_0 Sigma factor PP2C-like phosphatases K07315 - 3.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005451 376.0
BYD3_k127_3622847_1 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.00000000000000000000000000000000000000000000000000000000000000004052 239.0
BYD3_k127_3622847_2 Endonuclease/Exonuclease/phosphatase family - - - 0.0000000000000000000000003877 116.0
BYD3_k127_3626871_0 lysine biosynthetic process via aminoadipic acid - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002822 439.0
BYD3_k127_3626871_1 MMPL family K03296 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004079 280.0
BYD3_k127_3626871_2 cellulose binding - - - 0.0000000000000000000000000000000000000000007115 176.0
BYD3_k127_3626871_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.000000000000000000000000000000000000001274 164.0
BYD3_k127_3626871_4 Glycosyl hydrolase family 70 K01142,K01176 - 3.1.11.2,3.2.1.1 0.000000000002884 79.0
BYD3_k127_3644503_0 COG0367 Asparagine synthase (glutamine-hydrolyzing) K01953 - 6.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002477 477.0
BYD3_k127_3644503_1 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000002267 232.0
BYD3_k127_3644503_2 Belongs to the glycosyl hydrolase 57 family - - - 0.0000000000000000000005297 109.0
BYD3_k127_3644503_3 Endonuclease I - - - 0.00004272 55.0
BYD3_k127_3645480_0 Sulfate permease family K01673,K03321 - 4.2.1.1 4.305e-210 670.0
BYD3_k127_3647463_0 COG1629 Outer membrane receptor proteins, mostly Fe transport K02014 - - 0.00000008695 61.0
BYD3_k127_36517_0 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.000000000000000000000000000000000000000000000000000000000003881 222.0
BYD3_k127_36517_1 Glucose / Sorbosone dehydrogenase - - - 0.00000000000000000000000000000000000000000000001177 190.0
BYD3_k127_3667113_0 arylsulfatase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002238 287.0
BYD3_k127_3667113_1 arylsulfatase activity - - - 0.000000000000000000000000000000000000000000000002817 185.0
BYD3_k127_3667113_2 arylsulfatase A - - - 0.000000000000000000207 98.0
BYD3_k127_3668329_0 PFAM NAD dependent epimerase dehydratase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002027 331.0
BYD3_k127_3668329_1 Bacterial extracellular solute-binding protein, family 7 K11688,K21395 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000106 285.0
BYD3_k127_3668329_2 PFAM phospholipase Carboxylesterase K06999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005587 263.0
BYD3_k127_3668329_3 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000000000000003499 164.0
BYD3_k127_3668329_4 PFAM Tripartite ATP-independent periplasmic transporter, DctQ component - - - 0.000000000000000002838 98.0
BYD3_k127_3668329_5 PFAM TRAP C4-dicarboxylate transport system permease DctM subunit K11690 - - 0.0000002101 55.0
BYD3_k127_3674857_0 Belongs to the peptidase S16 family K01338,K04076,K04770 - 3.4.21.53 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002081 586.0
BYD3_k127_3674857_1 TIGRFAM A G-specific adenine glycosylase K03575 - - 0.0000000000000000000000000000000000000000000000000000001522 203.0
BYD3_k127_3674857_2 Belongs to the peptidase S16 family K04076 - 3.4.21.53 0.000000000000000003362 89.0
BYD3_k127_3674857_3 Required for flagellar hook formation. May act as a scaffolding protein K02389 - - 0.000683 49.0
BYD3_k127_3693611_0 Cell cycle protein K05837 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002701 269.0
BYD3_k127_3693611_1 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.0000000000000000000000000000000000000000000001224 188.0
BYD3_k127_3693611_2 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 - 1.1.1.25 0.000000000000000000000000000000000000000002026 169.0
BYD3_k127_3693611_3 Belongs to the UDP-N-acetylglucosamine 2-epimerase family K01791 - 5.1.3.14 0.00000000000001597 78.0
BYD3_k127_3695344_0 COG2133 Glucose sorbosone dehydrogenases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000168 485.0
BYD3_k127_3695344_1 Murein-degrading enzyme that degrades murein glycan strands and insoluble, high-molecular weight murein sacculi, with the concomitant formation of a 1,6-anhydromuramoyl product. Lytic transglycosylases (LTs) play an integral role in the metabolism of the peptidoglycan (PG) sacculus. Their lytic action creates space within the PG sacculus to allow for its expansion as well as for the insertion of various structures such as secretion systems and flagella K18691 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004016 444.0
BYD3_k127_3695344_2 Belongs to the ompA family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000407 246.0
BYD3_k127_3695344_3 PFAM UvrD REP helicase K03657 - 3.6.4.12 0.00000005062 56.0
BYD3_k127_3701314_0 Pyridoxal-phosphate dependent enzyme K01697,K01738 - 2.5.1.47,4.2.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002752 476.0
BYD3_k127_3701314_1 cystathionine gamma-synthase activity K01739,K01758,K01760,K01761 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0003962,GO:0004121,GO:0004123,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0016829,GO:0016846,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.5.1.48,4.4.1.1,4.4.1.11,4.4.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008825 454.0
BYD3_k127_3701314_2 Aminotransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001397 355.0
BYD3_k127_3701314_3 PFAM LIM, zinc-binding protein - - - 0.0000000000000000001518 101.0
BYD3_k127_3720304_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 GO:0003674,GO:0003824,GO:0004812,GO:0004823,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006429,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.4 3.549e-320 1000.0
BYD3_k127_3720304_1 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K13015 - 1.1.1.136 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002138 522.0
BYD3_k127_3720304_10 TIGRFAM EpsI family protein - - - 0.000000000000000000004557 102.0
BYD3_k127_3720304_11 STAS domain K04749 - - 0.0000000000000004766 84.0
BYD3_k127_3720304_12 phosphorelay signal transduction system K02481,K07712 - - 0.000000000000001691 80.0
BYD3_k127_3720304_2 Domains REC, sigma54 interaction, HTH8 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005895 383.0
BYD3_k127_3720304_3 PFAM NAD-dependent epimerase dehydratase K01784,K02473 - 5.1.3.2,5.1.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006536 356.0
BYD3_k127_3720304_4 TIGRFAM polysaccharide deactylase family protein, PEP-CTERM locus subfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007452 303.0
BYD3_k127_3720304_5 Glycosyl transferases group 1 K00786 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002062 266.0
BYD3_k127_3720304_6 undecaprenyl-phosphate glucose phosphotransferase activity K05946,K21303 GO:0000271,GO:0003674,GO:0003824,GO:0005975,GO:0005976,GO:0006629,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0009058,GO:0009059,GO:0009103,GO:0009243,GO:0009987,GO:0016051,GO:0016740,GO:0016772,GO:0016780,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0046402,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 2.4.1.187,2.7.8.40 0.00000000000000000000000000000000000000000000000000000001893 206.0
BYD3_k127_3720304_7 GGDEF domain - - - 0.000000000000000000000000000000000000000000000001327 188.0
BYD3_k127_3720304_8 eight transmembrane protein EpsH - - - 0.0000000000000000000000000000000000000000001173 177.0
BYD3_k127_3720304_9 Evidence 5 No homology to any previously reported sequences K03643 GO:0001530,GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0006810,GO:0006869,GO:0008150,GO:0008289,GO:0009279,GO:0009987,GO:0010876,GO:0015920,GO:0016020,GO:0016043,GO:0019867,GO:0022607,GO:0030312,GO:0030313,GO:0031975,GO:0033036,GO:0043163,GO:0043165,GO:0044085,GO:0044091,GO:0044462,GO:0044464,GO:0045229,GO:0051179,GO:0051234,GO:0061024,GO:0071702,GO:0071709,GO:0071840,GO:0071944,GO:0097367,GO:1901264 - 0.000000000000000000000007388 108.0
BYD3_k127_3723925_0 cAMP biosynthetic process - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006305 297.0
BYD3_k127_3723925_1 Protein kinase domain K12132 - 2.7.11.1 0.0000000000003423 83.0
BYD3_k127_3730235_0 Carbon starvation protein K06200 - - 5.45e-219 693.0
BYD3_k127_3730235_1 Amino acid permease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001227 246.0
BYD3_k127_3730235_2 - - - - 0.0000000004258 72.0
BYD3_k127_3730235_3 Glycosyl hydrolase family 10 K01181 - 3.2.1.8 0.000000007142 68.0
BYD3_k127_3743681_0 Exonuclease of the beta-lactamase fold involved in RNA processing K07576 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006943 561.0
BYD3_k127_3743681_1 cellulose binding - - - 0.00000000000001383 83.0
BYD3_k127_3743681_2 Methyltransferase K13623 - - 0.000001358 55.0
BYD3_k127_3750122_0 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007164 455.0
BYD3_k127_3750122_1 Biotin-lipoyl like K02005 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001252 327.0
BYD3_k127_3750122_2 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003136 314.0
BYD3_k127_3750122_3 PFAM Alcohol dehydrogenase GroES-like domain - - - 0.000000000000000000000000000000000000000000000000000000000001671 215.0
BYD3_k127_3750122_4 Polyketide cyclase / dehydrase and lipid transport - - - 0.00000000000000000000000000000000000000001103 157.0
BYD3_k127_3750122_5 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000001375 108.0
BYD3_k127_3750122_6 Methyltransferase - - - 0.000000000000000000006109 94.0
BYD3_k127_3812281_0 Binding-protein-dependent transport system inner membrane component - - - 0.000000000000000000000000000000000000000000000000007649 190.0
BYD3_k127_3812281_1 TIGRFAM molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 - - 0.000000000000000000000000000000000183 143.0
BYD3_k127_3813948_0 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008517 507.0
BYD3_k127_3813948_1 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001017 446.0
BYD3_k127_3813948_2 Pyridoxal-dependent decarboxylase conserved domain K01580,K01593,K13745 - 4.1.1.105,4.1.1.15,4.1.1.28,4.1.1.86 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001683 327.0
BYD3_k127_3813948_3 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.00000000000007668 78.0
BYD3_k127_3827555_0 Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family K00207,K12527,K17723 - 1.3.1.1,1.3.1.2,1.97.1.9 0.000000000000000000000000000000000000000000000000000000000000004912 226.0
BYD3_k127_3831668_0 ABC transporter K10112 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000086 445.0
BYD3_k127_3831668_1 involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744,K09774 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002306 362.0
BYD3_k127_3831668_2 IgA Peptidase M64 - - - 0.00000000000000002802 96.0
BYD3_k127_3831668_3 radical SAM K06871 - - 0.000004136 57.0
BYD3_k127_3831668_4 Pfam:UPF0118 - - - 0.0006346 50.0
BYD3_k127_3867352_0 Mycolic acid cyclopropane synthetase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003312 256.0
BYD3_k127_3867352_1 Mechanosensitive ion channel - - - 0.000000000000000000000000000000000000000000000000000000000000000007003 239.0
BYD3_k127_3867352_2 - - - - 0.000000000000000000000000000000000000001328 167.0
BYD3_k127_3871473_0 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K07277 - - 0.00000000000000003228 94.0
BYD3_k127_3871473_1 Polymer-forming cytoskeletal - - - 0.00000004688 64.0
BYD3_k127_3886059_0 - Amino acid transport and metabolism K01953 - 6.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000182 411.0
BYD3_k127_3886059_1 Glycosyltransferase Family 4 - - - 0.0000000000000000000000002278 108.0
BYD3_k127_3891617_0 Haemolysin-type calcium-binding repeat (2 copies) - - - 0.000000000000000000000000000000000000000000000000000000000000000000005062 260.0
BYD3_k127_3891617_1 tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain - - - 0.000000000000000000000000000000000000000000000000000003365 198.0
BYD3_k127_3905958_0 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008197 458.0
BYD3_k127_3905958_1 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001705 440.0
BYD3_k127_3905958_2 Putative zinc-binding metallo-peptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000663 359.0
BYD3_k127_3905958_3 - K19341 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000009748 266.0
BYD3_k127_3905958_4 Domain present in carbohydrate binding proteins and sugar hydrolses K07218 - - 0.0000000000000000000000000000000000000000000000000000000000002419 223.0
BYD3_k127_3905958_5 Heme copper-type cytochrome quinol oxidase, subunit K02276 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000001271 223.0
BYD3_k127_3905958_6 Protein of unknown function (DUF1428) - - - 0.000000000000000000000000000000000000000000008903 168.0
BYD3_k127_3905958_7 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.0000000000000000000000000000000000000000702 160.0
BYD3_k127_3905958_8 NosL K19342 - - 0.0000000000000003643 91.0
BYD3_k127_3907415_0 DEAD/H associated K03724 - - 0.0 1246.0
BYD3_k127_3912165_0 Protein tyrosine kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001274 557.0
BYD3_k127_3912165_1 Homocysteine S-methyltransferase K00547 - 2.1.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002402 460.0
BYD3_k127_3912165_10 Type III secretion system lipoprotein chaperone (YscW) - - - 0.000000000000000000000000000000000000000000000000002632 193.0
BYD3_k127_3912165_11 - - - - 0.000000000000000000000000000000000000000000000000004406 191.0
BYD3_k127_3912165_12 Belongs to the ompA family K03286 - - 0.0000000000000000000000000000000000000000000006617 181.0
BYD3_k127_3912165_13 ECF sigma factor - - - 0.0000000000000000000000000000000000008692 145.0
BYD3_k127_3912165_14 Concanavalin A-like lectin/glucanases superfamily - - - 0.00000000000000005141 93.0
BYD3_k127_3912165_15 Polymorphic membrane protein, Chlamydia - - - 0.00000004248 66.0
BYD3_k127_3912165_2 O-methyltransferase K09846 - 2.1.1.210 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002411 457.0
BYD3_k127_3912165_3 histidine kinase A domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005129 439.0
BYD3_k127_3912165_4 PFAM NADP oxidoreductase coenzyme F420-dependent K06988 - 1.5.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002325 336.0
BYD3_k127_3912165_5 Oxidoreductase family, NAD-binding Rossmann fold K13018 - 2.3.1.201 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001483 339.0
BYD3_k127_3912165_6 HWE histidine kinase K13924 - 2.1.1.80,3.1.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001203 296.0
BYD3_k127_3912165_7 Redoxin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000921 237.0
BYD3_k127_3912165_8 Hexapeptide repeat of succinyl-transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000009657 227.0
BYD3_k127_3912165_9 Formyl transferase, C-terminal domain K00604 - 2.1.2.9 0.0000000000000000000000000000000000000000000000000000000006402 211.0
BYD3_k127_3931294_0 Citrate synthase, C-terminal domain K01647 - 2.3.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001434 442.0
BYD3_k127_3931294_1 uridine kinase K00876 - 2.7.1.48 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006118 431.0
BYD3_k127_3931294_2 amine dehydrogenase activity - - - 0.00000000000000000000000000000000000000202 160.0
BYD3_k127_3931294_3 Carbamoyltransferase C-terminus K00612 - - 0.00000000000000000000000007667 123.0
BYD3_k127_3931294_4 COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases - - - 0.0000000000000001149 91.0
BYD3_k127_3931294_5 amine dehydrogenase activity K01406 - 3.4.24.40 0.000000002007 69.0
BYD3_k127_3931294_6 Serine aminopeptidase, S33 - - - 0.000006862 57.0
BYD3_k127_394212_0 ATPase activity K02045 - 3.6.3.25 2.597e-202 651.0
BYD3_k127_394212_1 Bacterial extracellular solute-binding protein K02048 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001033 451.0
BYD3_k127_394212_2 Methyltransferase type 11 K07755 - 2.1.1.137 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001617 278.0
BYD3_k127_394212_3 Belongs to the low molecular weight phosphotyrosine protein phosphatase family K03741 - 1.20.4.1 0.0000000000000000000000000000000000000000000000000000000000002413 224.0
BYD3_k127_394212_4 N-acetylglucosaminylinositol deacetylase activity - - - 0.00000000000000000000000000000000000000004076 155.0
BYD3_k127_394212_5 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.0000000000000000000000000001425 117.0
BYD3_k127_3944123_0 Belongs to the glycosyl hydrolase 2 family - - - 1.544e-267 835.0
BYD3_k127_3944123_1 galactose-1-phosphate uridylyltransferase K00965 GO:0003674,GO:0003824,GO:0004335,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006012,GO:0006793,GO:0006796,GO:0008108,GO:0008150,GO:0008152,GO:0008198,GO:0008270,GO:0009056,GO:0009987,GO:0016052,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016779,GO:0019200,GO:0019318,GO:0019320,GO:0019388,GO:0033499,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046365,GO:0046835,GO:0046872,GO:0046914,GO:0070569,GO:0071704,GO:1901575 2.7.7.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006923 458.0
BYD3_k127_3944123_2 Belongs to the GHMP kinase family. GalK subfamily K00849 - 2.7.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002155 304.0
BYD3_k127_3949522_0 PFAM aromatic amino acid beta-eliminating lyase threonine aldolase K01667 - 4.1.99.1 8.208e-205 653.0
BYD3_k127_3949522_1 response regulator, receiver - - - 0.0001698 50.0
BYD3_k127_3969790_0 HI0933-like protein K07007 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004661 329.0
BYD3_k127_3969790_1 AAA ATPase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000002494 171.0
BYD3_k127_3970150_0 Bacterial protein of unknown function (DUF839) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002461 450.0
BYD3_k127_3970150_1 Rieske-like [2Fe-2S] domain - - - 0.00000000000000000000000000000000000000000000000001623 183.0
BYD3_k127_3971175_0 Bacterial extracellular solute-binding proteins, family 5 Middle K02035,K13893 - - 0.0000000000000000000000000000000000000000000000000000000000002709 226.0
BYD3_k127_3971248_0 COGs COG0318 Acyl-CoA synthetase (AMP-forming) AMP-acid ligase II K01897 - 6.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009116 521.0
BYD3_k127_3971248_1 Receptor family ligand binding region K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004082 411.0
BYD3_k127_3971248_2 Branched-chain amino acid transport system / permease component K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001637 381.0
BYD3_k127_3971248_3 Branched-chain amino acid transport system / permease component K01995,K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005091 353.0
BYD3_k127_3971248_4 ABC transporter, ATP-binding protein K01996 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000175 314.0
BYD3_k127_3971248_5 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003847 298.0
BYD3_k127_3971248_6 PFAM SNARE associated Golgi protein K03975 - - 0.00000000000000000000000000000000000000000000000001389 191.0
BYD3_k127_3971248_7 divalent heavy-metal cations transporter - - - 0.000000000000000000000000000000000102 143.0
BYD3_k127_3971248_8 Amp-dependent synthetase and ligase K00797,K01897 - 2.5.1.16,6.2.1.3 0.00000008698 55.0
BYD3_k127_3971308_0 Adenosylhomocysteinase activity. It is involved in the biological process described with one-carbon metabolic process K01251 GO:0000096,GO:0000097,GO:0000166,GO:0001666,GO:0002376,GO:0002437,GO:0002439,GO:0002544,GO:0003674,GO:0003824,GO:0004013,GO:0005488,GO:0005507,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006152,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0006950,GO:0006952,GO:0006954,GO:0006955,GO:0007584,GO:0007610,GO:0007622,GO:0007623,GO:0008150,GO:0008152,GO:0008652,GO:0009056,GO:0009058,GO:0009063,GO:0009066,GO:0009069,GO:0009116,GO:0009119,GO:0009164,GO:0009605,GO:0009628,GO:0009987,GO:0009991,GO:0016053,GO:0016054,GO:0016787,GO:0016801,GO:0016802,GO:0017076,GO:0017144,GO:0019439,GO:0019510,GO:0019752,GO:0030554,GO:0031667,GO:0032259,GO:0033353,GO:0034641,GO:0034655,GO:0034656,GO:0036094,GO:0036293,GO:0042219,GO:0042221,GO:0042278,GO:0042454,GO:0042745,GO:0042802,GO:0042995,GO:0043005,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043621,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044272,GO:0044273,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046128,GO:0046130,GO:0046394,GO:0046395,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0046700,GO:0046872,GO:0046914,GO:0048037,GO:0048511,GO:0048512,GO:0050662,GO:0050667,GO:0050896,GO:0051186,GO:0051187,GO:0051287,GO:0055086,GO:0070482,GO:0071268,GO:0071704,GO:0072521,GO:0072523,GO:0097159,GO:0097458,GO:0098604,GO:0120025,GO:1901135,GO:1901136,GO:1901265,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606,GO:1901607,GO:1901657,GO:1901658 3.3.1.1 1.575e-224 702.0
BYD3_k127_3971308_1 helix_turn_helix, Arsenical Resistance Operon Repressor K03892 - - 0.0000000000000000000000000000000000000000000000000000006427 205.0
BYD3_k127_3971308_2 Protein of unknown function, DUF547 - - - 0.000000000000000000000000000000000000000000000000000001978 201.0
BYD3_k127_3971308_3 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000006507 202.0
BYD3_k127_3971308_4 Cytochrome c554 and c-prime - - - 0.00000000000000000000000000000000000000000004072 179.0
BYD3_k127_3971308_5 Sulfotransferase domain - - - 0.000000000000000000000000000000000000004871 160.0
BYD3_k127_3971308_6 glyoxalase bleomycin resistance protein dioxygenase K06996 - - 0.000001965 60.0
BYD3_k127_3979350_0 3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase K01247,K13529 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003824,GO:0003905,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006285,GO:0006304,GO:0006307,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008725,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0032131,GO:0032991,GO:0032993,GO:0033554,GO:0034641,GO:0035510,GO:0043170,GO:0043412,GO:0043733,GO:0043916,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:0140097,GO:1901360,GO:1901363 3.2.2.21 0.0000000000000000000000000000000000000000000000000002593 192.0
BYD3_k127_3979350_1 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated K00567,K10778 - 2.1.1.63 0.00000000000000000000000000000000000003342 151.0
BYD3_k127_3979350_2 - - - - 0.0000000000000000000000000000000004295 137.0
BYD3_k127_3984209_0 PFAM Major Facilitator Superfamily K08218 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004818 341.0
BYD3_k127_3984209_1 Conserved hypothetical protein 698 - - - 0.000000000000000000000000000000000000000000000000000000000000000003013 239.0
BYD3_k127_3984209_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000006408 221.0
BYD3_k127_3984209_3 Thermolysin metallopeptidase, alpha-helical domain K01400 - 3.4.24.28 0.0006456 51.0
BYD3_k127_3997540_0 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K01006 - 2.7.9.1 0.0 1253.0
BYD3_k127_3997540_1 chlorophyll binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002571 387.0
BYD3_k127_3997540_2 Bacterial regulatory protein, Fis family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002944 350.0
BYD3_k127_3997540_3 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.0000000000000000000000000000000000000000000000001366 198.0
BYD3_k127_3997540_4 Ribosomal protein L35 K02916 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000002251 83.0
BYD3_k127_3997540_5 Belongs to the bacterial ribosomal protein bS21 family K02970 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:1990904 - 0.000000009923 59.0
BYD3_k127_4013306_0 Predicted permease K07089 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003705 274.0
BYD3_k127_4013306_1 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.0000003439 52.0
BYD3_k127_402623_0 TIGRFAM polyphosphate nucleotide phosphotransferase, PPK2 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004298 408.0
BYD3_k127_402623_1 Glycosyl transferase, family 9 K02841,K02843,K02847,K02849,K21003 - - 0.0000000000000000000000002434 112.0
BYD3_k127_4027471_0 Ribosomal protein S1 K02945,K03527,K12132 GO:0005575,GO:0005576,GO:0018995,GO:0020003,GO:0030430,GO:0033643,GO:0033646,GO:0033655,GO:0043226,GO:0043227,GO:0043230,GO:0043656,GO:0043657,GO:0044215,GO:0044216,GO:0044217,GO:0044421,GO:0065010 1.17.7.4,2.7.11.1 1.115e-224 711.0
BYD3_k127_4027471_1 PFAM DAHP synthetase I KDSA K03856 - 2.5.1.54 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001084 397.0
BYD3_k127_4027471_10 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.000000000000000000000000000000002783 138.0
BYD3_k127_4027471_11 PFAM Phospholipid glycerol acyltransferase K00655 - 2.3.1.51 0.00000000000000000000000000000001913 136.0
BYD3_k127_4027471_2 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 GO:0003674,GO:0003824,GO:0003866,GO:0006082,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0019752,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046417,GO:0071704,GO:1901576 2.5.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001638 331.0
BYD3_k127_4027471_3 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 - 6.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000003077 248.0
BYD3_k127_4027471_4 Belongs to the pseudouridine synthase RsuA family K06178,K06183 - 5.4.99.19,5.4.99.22 0.000000000000000000000000000000000000000000000000000000000000000003459 234.0
BYD3_k127_4027471_5 Phage integrase, N-terminal SAM-like domain K04763 - - 0.0000000000000000000000000000000000000000000000000000000001562 208.0
BYD3_k127_4027471_6 Belongs to the cytidylate kinase family. Type 1 subfamily K00800,K00945,K03977,K13799 GO:0003674,GO:0003824,GO:0004127,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006573,GO:0006575,GO:0006725,GO:0006732,GO:0006753,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0034654,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046939,GO:0046940,GO:0050145,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.5.1.19,2.7.4.25,6.3.2.1 0.000000000000000000000000000000000000000000000000001595 205.0
BYD3_k127_4027471_7 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 - - 0.000000000000000000000000000000000000000000000000004169 188.0
BYD3_k127_4027471_8 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.0000000000000000000000000000000000000000000002446 177.0
BYD3_k127_4027471_9 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 GO:0000027,GO:0000900,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006355,GO:0006412,GO:0006417,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0015934,GO:0016043,GO:0017148,GO:0019219,GO:0019222,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0030371,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032991,GO:0034248,GO:0034249,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045182,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0051252,GO:0060255,GO:0065003,GO:0065007,GO:0070180,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0080090,GO:0090079,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903506,GO:1990904,GO:2000112,GO:2000113,GO:2001141 - 0.0000000000000000000000000000000000009655 146.0
BYD3_k127_4030455_0 ATPase components of ABC transporters with duplicated ATPase domains K06158 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004226 464.0
BYD3_k127_4030455_1 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001185 343.0
BYD3_k127_4030455_2 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003896 262.0
BYD3_k127_4030455_3 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001141 261.0
BYD3_k127_4030455_4 Ami_3 K01448 - 3.5.1.28 0.000000000000000000000000000000000000000000000000000000000000000000004018 251.0
BYD3_k127_4030455_5 Peptidase family M23 - - - 0.00000000000000000000000000000000000000000005222 174.0
BYD3_k127_4034313_0 amino acid activation for nonribosomal peptide biosynthetic process K17713,K20952 - - 0.0000000000000000000000000000000000000000000000000001159 213.0
BYD3_k127_404059_0 PFAM pyruvate carboxyltransferase K01640 - 4.1.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004138 317.0
BYD3_k127_404059_1 Biotin carboxylase C-terminal domain K01965,K01968 - 6.4.1.3,6.4.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004062 303.0
BYD3_k127_404059_2 Oxaloacetate K01960 - 6.4.1.1 0.0000000000008773 77.0
BYD3_k127_4079918_0 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001248 539.0
BYD3_k127_4079918_1 MreB/Mbl protein K03569 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002048 434.0
BYD3_k127_4079918_2 Penicillin-binding protein 2 K05515 GO:0000270,GO:0003674,GO:0003824,GO:0004180,GO:0004185,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006022,GO:0006023,GO:0006024,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0008238,GO:0008360,GO:0008658,GO:0009002,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016020,GO:0016021,GO:0016043,GO:0016787,GO:0017171,GO:0019538,GO:0022603,GO:0022604,GO:0030203,GO:0031224,GO:0031226,GO:0031406,GO:0033218,GO:0033293,GO:0034645,GO:0036094,GO:0042221,GO:0042493,GO:0042546,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044425,GO:0044459,GO:0044464,GO:0045229,GO:0046677,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051128,GO:0065007,GO:0065008,GO:0070008,GO:0070011,GO:0070589,GO:0071554,GO:0071555,GO:0071704,GO:0071840,GO:0071944,GO:0071972,GO:0097159,GO:0140096,GO:1901135,GO:1901137,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901681 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002015 286.0
BYD3_k127_4079918_3 Involved in formation and maintenance of cell shape K03570 - - 0.00000000000000000000000000008652 126.0
BYD3_k127_4079918_4 shape-determining protein MreD K03571 - - 0.00000002811 63.0
BYD3_k127_4085581_0 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000001042 239.0
BYD3_k127_4085581_1 Forkhead associated domain - - - 0.000000000001581 80.0
BYD3_k127_4085581_2 serine-type endopeptidase activity - - - 0.000000004422 68.0
BYD3_k127_4085581_3 biopolymer transport protein - - - 0.000002199 53.0
BYD3_k127_4088077_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 8.002e-210 658.0
BYD3_k127_4088077_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585,K07799 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008637 372.0
BYD3_k127_4088077_10 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296,K18138 - - 0.0000000000000000000002394 98.0
BYD3_k127_4088077_11 Parallel beta-helix repeats - - - 0.0000000001432 73.0
BYD3_k127_4088077_12 lipolytic protein G-D-S-L family - - - 0.00000003913 66.0
BYD3_k127_4088077_13 nucleotide catabolic process K05996 - 3.4.17.18 0.0000003644 63.0
BYD3_k127_4088077_2 Anthranilate synthase component I, N terminal region K01657,K01665,K13950 - 2.6.1.85,4.1.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003111 309.0
BYD3_k127_4088077_3 Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003213 300.0
BYD3_k127_4088077_4 TOBE domain K02017,K02018 - 3.6.3.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002687 282.0
BYD3_k127_4088077_5 Binding-protein-dependent transport system inner membrane component K02018 - - 0.000000000000000000000000000000000000000000000000000000000000000000151 240.0
BYD3_k127_4088077_6 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000002895 240.0
BYD3_k127_4088077_7 Bacterial extracellular solute-binding protein K02020 - - 0.000000000000000000000000000000000000000000000000006204 191.0
BYD3_k127_4088077_8 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.00000000000000000000000000000000000000000002769 182.0
BYD3_k127_4088077_9 TIGRFAM 40-residue YVTN family beta-propeller repeat protein - - - 0.0000000000000000000000000000003378 140.0
BYD3_k127_4112257_0 MotA TolQ ExbB proton channel K03561 - - 0.00000000000000000001177 102.0
BYD3_k127_4112257_1 Tetratricopeptide repeat - - - 0.000000000001517 82.0
BYD3_k127_4112257_2 long-chain fatty acid transporting porin activity - - - 0.000000000002364 79.0
BYD3_k127_4112257_3 Biopolymer transport protein ExbD/TolR K03559,K03560 - - 0.0000000005322 67.0
BYD3_k127_4112257_4 PFAM Biopolymer transport protein ExbD TolR K03560 - - 0.00004899 53.0
BYD3_k127_4112257_5 ompA family - - - 0.00008678 55.0
BYD3_k127_4112257_6 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.0001561 53.0
BYD3_k127_4119027_0 Uncharacterized protein conserved in bacteria (DUF2225) K09766 - - 0.000000000000000000000000000007433 131.0
BYD3_k127_4119027_1 Guanylyl transferase CofC like K09931 - - 0.000000000000000000000000005332 119.0
BYD3_k127_4119027_2 AsmA-like C-terminal region - - - 0.0000000003458 74.0
BYD3_k127_4200831_0 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 5.407e-197 627.0
BYD3_k127_4200831_1 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001011 340.0
BYD3_k127_4200831_2 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.0000000000000000000000000000000000000000000000000000000000000000000000002182 255.0
BYD3_k127_4200831_3 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.0000003834 62.0
BYD3_k127_4200831_4 mannose-ethanolamine phosphotransferase activity - - - 0.0000007332 61.0
BYD3_k127_4202611_0 MutS domain I K03555 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 7.903e-215 694.0
BYD3_k127_4202611_1 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004004 375.0
BYD3_k127_4202611_2 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002897 347.0
BYD3_k127_4202611_3 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.5.1.75 0.0000000000000000000000000000000000000000000000000000000000000001959 238.0
BYD3_k127_4202611_4 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.0000000000000000000000000000000006582 141.0
BYD3_k127_4221913_0 Belongs to the GppA Ppx family K01524 - 3.6.1.11,3.6.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007815 509.0
BYD3_k127_4221913_1 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001536 459.0
BYD3_k127_4221913_2 CHAD domain containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000009681 231.0
BYD3_k127_4221913_3 phosphohistidine phosphatase, SixA K08296 - - 0.0000000000000000001659 96.0
BYD3_k127_4223522_0 AMP-binding enzyme C-terminal domain K04110 - 6.2.1.25 3.462e-226 717.0
BYD3_k127_4223522_1 Acyl-CoA dehydrogenase, C-terminal domain K00249 - 1.3.8.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002803 329.0
BYD3_k127_4223522_2 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07305,K12267 - 1.8.4.11,1.8.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007222 312.0
BYD3_k127_4223522_3 NADH:flavin oxidoreductase / NADH oxidase family K09461 - 1.14.13.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001831 280.0
BYD3_k127_4223522_4 Belongs to the enoyl-CoA hydratase isomerase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001899 274.0
BYD3_k127_4223522_5 Creatinine amidohydrolase K01470 - 3.5.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000765 274.0
BYD3_k127_4223522_6 Belongs to the short-chain dehydrogenases reductases (SDR) family K00019,K07535 GO:0003674,GO:0003824,GO:0006725,GO:0008150,GO:0008152,GO:0009987,GO:0010130,GO:0016043,GO:0016491,GO:0016614,GO:0016616,GO:0018913,GO:0018915,GO:0022607,GO:0042537,GO:0043933,GO:0044085,GO:0044237,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:1901360 1.1.1.30 0.00000000000000000000000000000000000000000000000000000000000000001253 232.0
BYD3_k127_4223522_7 Protein of unknown function (DUF1572) - - - 0.0000000000000000000000000000000000000000000000000128 184.0
BYD3_k127_4223522_8 endoribonuclease L-PSP K09022 - 3.5.99.10 0.0000000000000000000000004881 118.0
BYD3_k127_4227829_0 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.000000000000000000000000000000000000000000000002336 196.0
BYD3_k127_4227829_1 - K01992 - - 0.00000000000009827 78.0
BYD3_k127_4227829_2 Domain of unknown function (DUF4340) - - - 0.00004012 55.0
BYD3_k127_4242267_0 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000004776 264.0
BYD3_k127_4242267_1 von Willebrand factor (vWF) type A domain K07114 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000001265 230.0
BYD3_k127_4242267_2 - - - - 0.000000001343 66.0
BYD3_k127_4242267_3 ATP:ADP antiporter activity K03301 - - 0.0003048 53.0
BYD3_k127_4246345_0 Protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006824 409.0
BYD3_k127_4246345_1 long-chain fatty acid transporting porin activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000009519 275.0
BYD3_k127_4259668_0 CHAT domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003721 368.0
BYD3_k127_4259668_1 PFAM blue (type 1) copper domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000001611 226.0
BYD3_k127_4259668_2 protein conserved in bacteria K09859 - - 0.00000000000000000000000000000000000000000000000000000000000007335 228.0
BYD3_k127_4259668_3 Belongs to the peptidase S8 family K08651,K14743 - 3.4.21.66 0.0000000000000000000000000000000000000000000000000000005519 210.0
BYD3_k127_4259668_4 DNA-templated transcription, initiation K03088 - - 0.0000000000000000000000000000000002899 140.0
BYD3_k127_4260702_0 Bacterial regulatory protein, Fis family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007661 347.0
BYD3_k127_4260702_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K07710 - 2.7.13.3 0.00000000000000000000000000000000000008563 159.0
BYD3_k127_4260702_2 Thrombospondin type 3 repeat - - - 0.00000000000000000002653 91.0
BYD3_k127_4300705_0 PFAM Metallophosphoesterase K09769 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001694 324.0
BYD3_k127_4300705_1 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 GO:0003674,GO:0003824,GO:0004477,GO:0004488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006730,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016645,GO:0016646,GO:0016787,GO:0016810,GO:0016814,GO:0019238,GO:0044237,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0055114 1.5.1.5,3.5.4.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001747 308.0
BYD3_k127_4300705_2 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601,K03797 - 3.1.11.6,3.4.21.102 0.0000000000000000000000000000000000000000000000000000000000000000000000003394 254.0
BYD3_k127_4300705_3 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.0000001463 59.0
BYD3_k127_4314895_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296,K18138 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009361 488.0
BYD3_k127_4314895_1 BNR Asp-box repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009485 374.0
BYD3_k127_4315799_0 CHAT domain - - - 0.00000000000000000000000000000000000000000000004893 192.0
BYD3_k127_4366099_0 protoporphyrinogen oxidase activity K01854 - 5.4.99.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001172 575.0
BYD3_k127_4366099_1 transferase activity, transferring glycosyl groups - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002783 346.0
BYD3_k127_4384700_0 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD K01802 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001812 323.0
BYD3_k127_4384700_2 spore germination K07790 - - 0.0000000000000000000002067 100.0
BYD3_k127_4395649_0 ADP-ribosylation factor family K06883 - - 0.0000000000000000000000000000000000000000000000000000000000000001143 234.0
BYD3_k127_4395649_1 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995,K08256 - 2.4.1.345,2.7.8.5 0.00000000000000000000000000000000000000000002152 174.0
BYD3_k127_4395649_2 Bacterial lipid A biosynthesis acyltransferase K22311 GO:0003674,GO:0003824,GO:0005575,GO:0006629,GO:0006643,GO:0006664,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009247,GO:0009987,GO:0016020,GO:0016740,GO:0016746,GO:0040007,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0046467,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 2.3.1.265 0.00000000000000000000000009409 118.0
BYD3_k127_4397415_0 Belongs to the malate synthase family K01638 - 2.3.3.9 6.646e-225 709.0
BYD3_k127_4397415_1 ATPase associated with various cellular activities, AAA_5 K02584 - - 1.923e-210 672.0
BYD3_k127_4397415_2 PFAM isocitrate lyase and phosphorylmutase K01637 - 4.1.3.1 1.494e-207 654.0
BYD3_k127_4397415_3 IrrE N-terminal-like domain K07110 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001663 522.0
BYD3_k127_4397415_4 Peptidase dimerisation domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000131 513.0
BYD3_k127_4397415_5 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001199 346.0
BYD3_k127_4397415_6 OsmC-like protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003013 263.0
BYD3_k127_4417314_0 TonB-dependent receptor K16092 - - 0.00000000000000000000000000000000000000000000000000000000000001067 239.0
BYD3_k127_4417314_1 amine dehydrogenase activity - - - 0.000000000000003724 87.0
BYD3_k127_4417314_2 Tetratricopeptide repeat protein - - - 0.000001084 56.0
BYD3_k127_4417314_3 extracellular matrix structural constituent - - - 0.000001581 57.0
BYD3_k127_4417314_4 guanyl-nucleotide exchange factor activity K01179,K03929,K09612,K12287,K19701,K19702 GO:0003674,GO:0003824,GO:0004177,GO:0005575,GO:0005623,GO:0006464,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0009987,GO:0016787,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0036211,GO:0042597,GO:0043170,GO:0043412,GO:0043687,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.2.1.4,3.4.11.10,3.4.11.24,3.4.11.6 0.00001377 58.0
BYD3_k127_442372_0 ABC transporter substrate-binding protein K02027 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001207 476.0
BYD3_k127_442372_1 Protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003623 404.0
BYD3_k127_442372_2 ABC-type sugar transport systems, permease components K02025 - - 0.000000000000008271 80.0
BYD3_k127_4440663_0 ABC transporter substrate binding protein K01989 - - 0.000000000000000000000000000000002236 141.0
BYD3_k127_4441233_0 PFAM TRAP C4-dicarboxylate transport system permease DctM subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002034 458.0
BYD3_k127_4441233_1 TRAP-type C4-dicarboxylate transport system small permease component - - - 0.0002146 48.0
BYD3_k127_4471174_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 GO:0003674,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.7 1.777e-231 752.0
BYD3_k127_4471174_1 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001291 476.0
BYD3_k127_4471174_2 PFAM Nucleotidyl transferase K00973 - 2.7.7.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001269 430.0
BYD3_k127_4471174_3 Competence-damaged protein K03742,K03743 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 3.5.1.42 0.0000000000000000000000000000000000000000000000000000000000000007336 234.0
BYD3_k127_4471174_4 PFAM PHP domain protein K01104 - 3.1.3.48 0.00000000000000000000000000000000000000000005169 171.0
BYD3_k127_4471174_5 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.00000000000000000000000000005384 124.0
BYD3_k127_4471174_6 RecX family K03565 - - 0.0000000000000939 79.0
BYD3_k127_4501865_0 amine dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005491 542.0
BYD3_k127_4511316_0 Nitrous oxide reductase K00376 - 1.7.2.4 3.459e-243 770.0
BYD3_k127_4511316_1 P-type ATPase K17686 - 3.6.3.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004271 305.0
BYD3_k127_4511316_2 methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006364 294.0
BYD3_k127_4511316_3 Belongs to the cysteine synthase cystathionine beta- synthase family K01738 - 2.5.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000005146 262.0
BYD3_k127_4511316_4 2 iron, 2 sulfur cluster binding - - - 0.00000000000000000000000001226 115.0
BYD3_k127_4511316_5 Protein of unknown function (DUF2934) - - - 0.0008796 48.0
BYD3_k127_4513586_0 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K00174 GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0030312,GO:0044464,GO:0050896,GO:0055114,GO:0071944 1.2.7.11,1.2.7.3 2.268e-235 756.0
BYD3_k127_4513586_1 COG1013 Pyruvate ferredoxin oxidoreductase and related 2-oxoacid ferredoxin K00175 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008334 462.0
BYD3_k127_4513586_10 Evidence 5 No homology to any previously reported sequences K14194,K21449 - - 0.0000000000414 73.0
BYD3_k127_4513586_11 Periplasmic protein TonB links inner and outer membranes K03832 - - 0.0005313 51.0
BYD3_k127_4513586_12 Tetratricopeptide repeat - - - 0.0006036 50.0
BYD3_k127_4513586_2 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K01007,K08483 - 2.7.3.9,2.7.9.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003191 323.0
BYD3_k127_4513586_3 DHH family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000176 269.0
BYD3_k127_4513586_4 Involved in the TonB-independent uptake of proteins K03641 GO:0003674,GO:0005215,GO:0006810,GO:0008150,GO:0019534,GO:0022857,GO:0051179,GO:0051234,GO:0055085,GO:1901998 - 0.00000000000000000000000000000000000000000000000000000000000000000000008401 259.0
BYD3_k127_4513586_5 Cobalamin adenosyltransferase K00798 - 2.5.1.17 0.00000000000000000000000000000000000000009587 157.0
BYD3_k127_4513586_6 Belongs to the ompA family K03640 - - 0.000000000000000000000000000002621 126.0
BYD3_k127_4513586_7 PFAM MotA TolQ ExbB proton channel K03562 - - 0.00000000000000000000000000003359 126.0
BYD3_k127_4513586_8 PFAM Biopolymer transport protein ExbD TolR K03559,K03560 - - 0.0000000000000000004491 96.0
BYD3_k127_4513586_9 Uncharacterized conserved protein (DUF2203) - - - 0.000000000003264 72.0
BYD3_k127_4520665_0 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 1.1.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005194 464.0
BYD3_k127_4520665_1 Short chain fatty acid transporter K02106 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001248 442.0
BYD3_k127_4520665_2 Glycosyltransferase like family 2 K16698 - - 0.00000000000000000000000000000000000000000000000000000000000000000000008203 247.0
BYD3_k127_4520665_3 Bacterial membrane protein YfhO - - - 0.00000000000001588 81.0
BYD3_k127_4520665_4 - - - - 0.00000000001157 72.0
BYD3_k127_4530849_0 (ABC) transporter K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004541 324.0
BYD3_k127_4530849_1 pyrroloquinoline quinone binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000219 308.0
BYD3_k127_4530849_2 impB/mucB/samB family K02346,K03502 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000007032 276.0
BYD3_k127_4530849_3 Winged helix DNA-binding domain K09927 - - 0.0000000000000000000000000000000000000000000000000000001686 210.0
BYD3_k127_4530849_4 DinB family - - - 0.0000000000000000000000000000000000000000000009131 170.0
BYD3_k127_4530849_5 Pregnancy-associated plasma protein-A - - - 0.0000000000000000000000000000000000000004822 165.0
BYD3_k127_4530849_6 - - - - 0.000000000000005276 80.0
BYD3_k127_4530849_7 - - - - 0.000001259 61.0
BYD3_k127_4530849_8 FlgD Ig-like domain - - - 0.00002095 57.0
BYD3_k127_4531009_0 glycosyl hydrolase, BNR repeat-containing protein - - - 0.000000000000000000000000001171 130.0
BYD3_k127_4531578_0 Belongs to the GPI family K01810,K13810 - 2.2.1.2,5.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002528 440.0
BYD3_k127_4531578_1 Isocitrate/isopropylmalate dehydrogenase K00030 - 1.1.1.41 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003725 430.0
BYD3_k127_4531578_2 Alpha amylase catalytic - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002092 339.0
BYD3_k127_4531578_3 YceI-like domain - - - 0.000000000000000000000000000000000000002547 163.0
BYD3_k127_4531578_4 Carbon dioxide concentrating mechanism carboxysome shell protein - - - 0.0000000000000000000000001151 108.0
BYD3_k127_4531578_5 Belongs to the bacterial glucokinase family K00845 - 2.7.1.2 0.000000000000000001093 101.0
BYD3_k127_4531578_6 BMC K04027 - - 0.00000000000000005094 83.0
BYD3_k127_4531578_7 SatD family (SatD) - - - 0.000003206 57.0
BYD3_k127_4531578_8 polysaccharide deacetylase - - - 0.00003292 49.0
BYD3_k127_4550822_0 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002984 325.0
BYD3_k127_4550822_1 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 - 6.3.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002779 309.0
BYD3_k127_4550822_2 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042 - 2.3.1.157,2.7.7.23 0.000000000000000000000000000000000000000000000000000000000002277 226.0
BYD3_k127_4550822_3 Protein similar to CwfJ C-terminus 1 K19710 - 2.7.7.53 0.000000000000000000000000000000000000000000000000000069 193.0
BYD3_k127_4550822_4 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes K03116,K03117 - - 0.000000000001744 71.0
BYD3_k127_4550822_5 PFAM Cell envelope-related transcriptional attenuator domain - - - 0.00003455 55.0
BYD3_k127_4550822_6 Domain of unknown function (DUF4321) - - - 0.0003393 47.0
BYD3_k127_45521_0 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 GO:0000166,GO:0003674,GO:0003824,GO:0004365,GO:0005488,GO:0008150,GO:0008152,GO:0016491,GO:0016620,GO:0016903,GO:0036094,GO:0043891,GO:0048037,GO:0050662,GO:0051287,GO:0055114,GO:0097159,GO:1901265,GO:1901363 1.2.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002177 471.0
BYD3_k127_45521_1 phosphoglycerate kinase activity K00927,K01803 GO:0003674,GO:0003824,GO:0004618,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016052,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576 2.7.2.3,5.3.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002374 332.0
BYD3_k127_4559894_0 Belongs to the Glu Leu Phe Val dehydrogenases family K00261 - 1.4.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000002494 250.0
BYD3_k127_4559894_1 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 0.0000000000000001088 88.0
BYD3_k127_4617708_0 COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and K03182 - 4.1.1.98 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004837 431.0
BYD3_k127_4622227_0 arylsulfatase activity - - - 0.0000000000000000000000000000000000000000000000000000008514 213.0
BYD3_k127_4623727_0 Two component, sigma54 specific, transcriptional regulator, Fis family K02667,K07713,K07714,K19641 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007649 473.0
BYD3_k127_4623727_1 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000007842 265.0
BYD3_k127_4623727_2 Domains HisKA, HATPase_c - - - 0.0000000000000000000000000000001333 132.0
BYD3_k127_4623727_3 Pfam:N_methyl_2 - - - 0.0000000001253 68.0
BYD3_k127_4623727_4 Type IV pilin PilA K02650 GO:0005575,GO:0005623,GO:0009289,GO:0042995,GO:0044464 - 0.000001305 57.0
BYD3_k127_4647683_0 Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes - - - 0.000000000000000000000000000000002881 130.0
BYD3_k127_4647683_1 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP - - - 0.000000000000000000145 94.0
BYD3_k127_4647683_2 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000004156 71.0
BYD3_k127_4660498_0 Tetratricopeptide repeat K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000009227 281.0
BYD3_k127_4660498_1 DNA-templated transcription, initiation K02405 - - 0.00000000000000000000000000000000000004065 150.0
BYD3_k127_4660498_2 Involved in the tonB-independent uptake of proteins - - - 0.0000000000001682 75.0
BYD3_k127_4669138_0 response regulator K10943 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001528 366.0
BYD3_k127_4669138_1 TIGRFAM type IV pilus assembly protein PilM K02662 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002478 258.0
BYD3_k127_4669138_2 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.000000000000000000000000000000000000000000000000000000000000000001083 239.0
BYD3_k127_4669138_3 Member of the two-component regulatory system AtoS AtoC. In the presence of acetoacetate, AtoS AtoC stimulates the expression of the atoDAEB operon, leading to short chain fatty acid catabolism and activation of the poly-(R)-3-hydroxybutyrate (cPHB) biosynthetic pathway. Also induces the operon in response to spermidine. Involved in the regulation of motility and chemotaxis, via transcriptional induction of the flagellar regulon. AtoS is a membrane-associated kinase that phosphorylates and activates AtoC in response to environmental signals K07710 GO:0000155,GO:0000160,GO:0000166,GO:0003674,GO:0003824,GO:0004672,GO:0004673,GO:0005488,GO:0005524,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0007154,GO:0007165,GO:0008144,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016775,GO:0017076,GO:0018106,GO:0018193,GO:0018202,GO:0019538,GO:0023014,GO:0023052,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035556,GO:0035639,GO:0036094,GO:0036211,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0046777,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007,GO:0071704,GO:0071944,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564 2.7.13.3 0.000000000000000000000000000000000000000000000001111 199.0
BYD3_k127_4669138_4 PFAM Pilus assembly protein PilO K02664 - - 0.0000000000000000005629 95.0
BYD3_k127_4669138_5 PFAM Na-Ca exchanger integrin-beta4 peptidase-like FG-GAP K20276 - - 0.00000000005047 76.0
BYD3_k127_4669138_6 pilus assembly protein PilN K02663 - - 0.0000004717 61.0
BYD3_k127_4674065_0 GAF domain-containing protein K08968 - 1.8.4.14 0.000000000000000000000000000000000000000000000000003071 187.0
BYD3_k127_4674065_1 Histidine kinase - - - 0.0000000000000000000000004567 119.0
BYD3_k127_4712432_0 AcrB/AcrD/AcrF family K15726 - - 3.042e-221 700.0
BYD3_k127_4759755_0 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 3.284e-246 778.0
BYD3_k127_4759755_1 ParB-like nuclease domain K03497 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006829 387.0
BYD3_k127_4759755_10 Acyltransferase K00655 - 2.3.1.51 0.000000000000002859 85.0
BYD3_k127_4759755_11 cellulose binding K00505 - 1.14.18.1 0.0000000009482 72.0
BYD3_k127_4759755_12 SNARE associated Golgi protein - - - 0.0000107 55.0
BYD3_k127_4759755_13 lipid kinase activity - - - 0.00001652 56.0
BYD3_k127_4759755_14 acetoacetate decarboxylase - - - 0.0005086 52.0
BYD3_k127_4759755_2 COG0156 7-keto-8-aminopelargonate synthetase and related enzymes K21784 GO:0003674,GO:0005488,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016999,GO:0017000,GO:0017144,GO:0019842,GO:0036094,GO:0043167,GO:0043169,GO:0044237,GO:0044249,GO:0048037,GO:0070279,GO:0070280,GO:0097159,GO:1901363 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008324 322.0
BYD3_k127_4759755_3 Peptidase family M48 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002452 304.0
BYD3_k127_4759755_4 Phosphomethylpyrimidine kinase K00941 - 2.7.1.49,2.7.4.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003097 274.0
BYD3_k127_4759755_5 Protein of unknown function (DUF1349) - - - 0.0000000000000000000000000000000000000000000000000000000000348 233.0
BYD3_k127_4759755_6 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000142 212.0
BYD3_k127_4759755_7 lipid kinase, YegS Rv2252 BmrU family - - - 0.0000000000000000000000000000000000135 153.0
BYD3_k127_4759755_8 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.000000000000000000000000000000005992 147.0
BYD3_k127_4759755_9 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995 - 2.7.8.5 0.000000000000000000000000000001349 134.0
BYD3_k127_4785752_0 Dienelactone hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001852 396.0
BYD3_k127_4785752_1 oxidoreductase activity K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000009879 229.0
BYD3_k127_4785752_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000621 224.0
BYD3_k127_4785752_3 Fatty acid desaturase K10255 - 1.14.19.23,1.14.19.45 0.0000000000000000000000000000000000000000006092 165.0
BYD3_k127_4785752_4 cellulose binding - - - 0.0000000000000000004866 91.0
BYD3_k127_4785752_5 Protein of unknown function (DUF2934) - - - 0.0003865 49.0
BYD3_k127_479820_0 Polysaccharide biosynthesis protein - - - 0.0000000000000000000000000006326 125.0
BYD3_k127_479820_1 Surface antigen K07277 - - 0.00000000000000001325 93.0
BYD3_k127_4803884_0 Type II/IV secretion system protein K02283,K20527 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000019 517.0
BYD3_k127_4803884_1 Putative Flp pilus-assembly TadE/G-like - - - 0.00000000000000000000000000000000000000000000000000000009901 210.0
BYD3_k127_4803884_2 Type II secretion system K12511 - - 0.00000000000000000000000000000000000000000000000000001187 200.0
BYD3_k127_4803884_3 PFAM Type II secretion system F K12510 - - 0.00000000000000000000000000000000000000000000000000162 194.0
BYD3_k127_4803884_4 Belongs to the GSP D family K02280 - - 0.000000000000000000000000000000000000000000000000003132 198.0
BYD3_k127_4803884_5 NUBPL iron-transfer P-loop NTPase K02282 - - 0.000000000000000000000000000000000000000000000109 183.0
BYD3_k127_4803884_6 Pilus assembly protein CpaB K02279 - - 0.00000000000000000000000000000000007571 145.0
BYD3_k127_4803884_7 Uncharacterized ACR, COG1430 K09005 - - 0.000000000000000000001599 100.0
BYD3_k127_4803884_8 PFAM Peptidase A24A, prepilin type IV K02278 - 3.4.23.43 0.0000000000000000004333 94.0
BYD3_k127_4803884_9 TadE-like protein - - - 0.0000000000001117 79.0
BYD3_k127_4832672_0 CHAT domain - - - 0.00000000000000000000000000005643 135.0
BYD3_k127_4848264_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296,K18138,K18307 - - 0.0 1025.0
BYD3_k127_4848264_1 MgsA AAA+ ATPase C terminal K07478 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002765 400.0
BYD3_k127_4848264_10 Glycosyl hydrolase family 70 K01142,K01176 - 3.1.11.2,3.2.1.1 0.00000000002876 78.0
BYD3_k127_4848264_11 cytoskeletal protein binding K17341 - - 0.0000000003444 74.0
BYD3_k127_4848264_12 amine dehydrogenase activity K12287 - - 0.000000001693 66.0
BYD3_k127_4848264_13 Protein conserved in bacteria - - - 0.000009292 59.0
BYD3_k127_4848264_14 DNA excision K02806 - - 0.00005057 48.0
BYD3_k127_4848264_2 Sodium/calcium exchanger protein K07300 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002735 384.0
BYD3_k127_4848264_3 HDOD domain - - - 0.00000000000000000000000000000000000000000000000000365 197.0
BYD3_k127_4848264_4 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814 - 2.4.1.129 0.000000000000000000000000000000000000000000004582 183.0
BYD3_k127_4848264_5 GAF domain - - - 0.00000000000000000000000000000000000000006912 173.0
BYD3_k127_4848264_6 Belongs to the RtcB family K14415 - 6.5.1.3 0.000000000000000000000000000000000001139 139.0
BYD3_k127_4848264_7 Metal-dependent hydrolase HDOD - - - 0.00000000000000000000000000001203 137.0
BYD3_k127_4848264_8 Lamin Tail Domain - - - 0.000000000000001286 91.0
BYD3_k127_4848264_9 PFAM nucleic acid binding, OB-fold, tRNA - - - 0.000000000003199 79.0
BYD3_k127_4850535_0 TonB-dependent receptor K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008333 301.0
BYD3_k127_4850535_1 Membrane protein involved in the export of o-antigen and teichoic acid K03328 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001461 299.0
BYD3_k127_4850535_2 TonB-dependent receptor K02014 - - 0.000000000000000000000000000000000000000001421 160.0
BYD3_k127_4854107_0 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004648 502.0
BYD3_k127_4854107_1 Belongs to the arginase family K01476,K01480 - 3.5.3.1,3.5.3.11 0.0000000000000000000000000000000000000000000000000000000000002375 222.0
BYD3_k127_4854107_2 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.000000000000000000000000000000000000000000000008054 177.0
BYD3_k127_4854107_3 Sulfatase - - - 0.0000000000000000009599 99.0
BYD3_k127_4854107_4 O-Antigen ligase - - - 0.0000000000000008974 92.0
BYD3_k127_4854107_5 Parallel beta-helix repeats - - - 0.00000597 59.0
BYD3_k127_487908_0 regulation of cell-substrate adhesion K06079 - - 0.000000000000000000004214 104.0
BYD3_k127_4891974_0 ASPIC and UnbV - - - 0.0000000000000000000000000003297 124.0
BYD3_k127_4891974_1 TonB-dependent receptor - - - 0.0000000000000000000000006251 122.0
BYD3_k127_4891974_2 Sigma-70 region 2 K03088 - - 0.000000000000000000000008388 107.0
BYD3_k127_4891974_3 FlgD Ig-like domain K21449 - - 0.00000000000002856 82.0
BYD3_k127_4895162_0 Myo-inositol-1-phosphate synthase K01858 - 5.5.1.4 8.848e-217 680.0
BYD3_k127_4895162_1 Belongs to the short-chain dehydrogenases reductases (SDR) family K07124 - - 0.0000000000000000000000000000000000000000000000000000003814 207.0
BYD3_k127_4895162_2 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) - - - 0.00000000636 67.0
BYD3_k127_4895162_3 dTDP biosynthetic process K00943 GO:0003674,GO:0003824,GO:0004798,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009165,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.4.9 0.00008374 51.0
BYD3_k127_4921174_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 GO:0000166,GO:0003674,GO:0003824,GO:0004175,GO:0004176,GO:0004222,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006508,GO:0006807,GO:0006950,GO:0006979,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0008270,GO:0009056,GO:0009057,GO:0010468,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019222,GO:0019538,GO:0030145,GO:0030163,GO:0030554,GO:0031224,GO:0031226,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0035639,GO:0036094,GO:0040007,GO:0042623,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043273,GO:0044238,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0046872,GO:0046914,GO:0050789,GO:0050896,GO:0060255,GO:0065007,GO:0070011,GO:0071704,GO:0071944,GO:0097159,GO:0097367,GO:0098796,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002066 288.0
BYD3_k127_4921174_1 Belongs to the purine pyrimidine phosphoribosyltransferase family K00760 - 2.4.2.8 0.000000000000000000000000000000000000000000000000000000000009479 215.0
BYD3_k127_4921174_2 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.000000000000000000000000000000000000000000000000000001186 211.0
BYD3_k127_4921174_3 membrane - - - 0.00004563 57.0
BYD3_k127_4928247_0 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 GO:0000988,GO:0000989,GO:0003674,GO:0003756,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006457,GO:0006458,GO:0006725,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010556,GO:0015035,GO:0015036,GO:0016020,GO:0016032,GO:0016043,GO:0016491,GO:0016667,GO:0016853,GO:0016860,GO:0016864,GO:0016989,GO:0019219,GO:0019222,GO:0022607,GO:0031323,GO:0031326,GO:0032991,GO:0034641,GO:0034645,GO:0042026,GO:0043167,GO:0043169,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044403,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0050789,GO:0050794,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0051171,GO:0051252,GO:0051704,GO:0055114,GO:0060255,GO:0061077,GO:0065003,GO:0065007,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0140096,GO:0140110,GO:1901360,GO:1901576,GO:1903506,GO:2001141 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000346 421.0
BYD3_k127_4928247_1 COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases K02503 - - 0.0000000000000000000000000000000000000012 150.0
BYD3_k127_4928247_2 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 GO:0000166,GO:0000774,GO:0003674,GO:0005488,GO:0005515,GO:0008150,GO:0017076,GO:0030234,GO:0030554,GO:0036094,GO:0050790,GO:0051082,GO:0060589,GO:0060590,GO:0065007,GO:0065009,GO:0097159,GO:0098772,GO:1901265,GO:1901363 - 0.0000000000000000000000000000000002674 138.0
BYD3_k127_4928247_3 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.0000000000000000000000000000004087 132.0
BYD3_k127_4928247_4 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.0000000000003019 70.0
BYD3_k127_4957205_0 metallopeptidase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003557 349.0
BYD3_k127_4971340_0 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003366 303.0
BYD3_k127_4971340_1 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.0000000000000000000000000000000000000000000000000000000005029 208.0
BYD3_k127_4971340_2 Evidence 5 No homology to any previously reported sequences - - - 0.000000007542 69.0
BYD3_k127_4980384_0 AlkA N-terminal domain K13529,K13530 - 3.2.2.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002884 312.0
BYD3_k127_4980384_1 Glycosyl transferases group 1 K19424 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001903 258.0
BYD3_k127_4980384_2 Iron-sulfur cluster insertion protein ErpA K15724 GO:0003674,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016043,GO:0016226,GO:0019538,GO:0022607,GO:0031163,GO:0043167,GO:0043169,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0048037,GO:0051186,GO:0051536,GO:0051537,GO:0051539,GO:0051540,GO:0051604,GO:0071704,GO:0071840,GO:1901564 - 0.000000000000004472 77.0
BYD3_k127_5013513_0 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001243 480.0
BYD3_k127_5013513_1 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004862 443.0
BYD3_k127_5013513_2 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000807 447.0
BYD3_k127_5013513_3 ABC transporter K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003622 406.0
BYD3_k127_5013513_4 Secretion protein K01993 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000426 302.0
BYD3_k127_503269_0 benzoyl-CoA reductase K04113 - 1.3.7.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002526 585.0
BYD3_k127_503269_1 BadF/BadG/BcrA/BcrD ATPase family K04114 - 1.3.7.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000254 473.0
BYD3_k127_503269_2 benzoyl-CoA reductase K04112 - 1.3.7.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003914 422.0
BYD3_k127_503269_3 Enoyl-CoA hydratase/isomerase K07537 - 4.2.1.100 0.0000000000000000000000000000000001654 137.0
BYD3_k127_5034212_0 Diguanylate cyclase, GGDEF domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000713 298.0
BYD3_k127_5034212_1 Histidine kinase A domain protein - - - 0.000000000000000000000000000000000000000000000000001697 209.0
BYD3_k127_5034212_2 PFAM response regulator receiver K02483,K07658,K07668 - - 0.000000000000000000000000000000000001724 153.0
BYD3_k127_5034212_3 phosphohydrolase, HD sub domain - - - 0.000000000000000000000000000005774 139.0
BYD3_k127_5034212_4 Cna protein B-type domain - - - 0.000000000000003282 91.0
BYD3_k127_5034212_5 Bacterial Ig-like domain (group 3) K01179 - 3.2.1.4 0.0000004591 64.0
BYD3_k127_5034212_6 Type II transport protein GspH K08084 - - 0.0000009138 59.0
BYD3_k127_5034212_7 Prokaryotic N-terminal methylation motif K02458,K02671 - - 0.00003632 53.0
BYD3_k127_5040178_0 Glycosyl transferase family 21 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001496 469.0
BYD3_k127_5040178_1 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001771 272.0
BYD3_k127_5040178_2 ADP-ribosylglycohydrolase - - - 0.00000000000000000000004038 115.0
BYD3_k127_5045961_0 WD40-like Beta Propeller Repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001527 439.0
BYD3_k127_5045961_1 PFAM type I phosphodiesterase nucleotide pyrophosphatase - - - 0.0000000000000000000000000000000001668 151.0
BYD3_k127_5045961_2 Protein of unknown function (DUF2847) - - - 0.00000000000000000007842 97.0
BYD3_k127_5059522_0 PFAM carboxyl transferase K15052 - 2.1.3.15,6.4.1.3 2.842e-243 773.0
BYD3_k127_5059522_1 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001231 580.0
BYD3_k127_5059522_2 Histidine kinase K13924 - 2.1.1.80,3.1.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001644 513.0
BYD3_k127_5059522_3 Uncharacterized protein conserved in bacteria (DUF2236) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002554 334.0
BYD3_k127_5059522_4 cellulose binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003586 278.0
BYD3_k127_5059522_5 enoyl-CoA hydratase K13766,K15312 - 4.2.1.18 0.0000000000000000000000000000000000000000000000000000000000000000594 233.0
BYD3_k127_5059522_6 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.0000000000000000000000000000000000000000000000000000001177 209.0
BYD3_k127_5059522_7 Biotin carboxylase C-terminal domain K01961 - 6.3.4.14,6.4.1.2 0.000000000000000000000000000000000000000000000000003828 194.0
BYD3_k127_5059522_8 Smr domain - - - 0.00000000000000000000000005126 110.0
BYD3_k127_5059522_9 Belongs to the peptidase S8 family - - - 0.00000000000029 83.0
BYD3_k127_5067617_0 Ring hydroxylating alpha subunit (catalytic domain) K00479 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001355 360.0
BYD3_k127_5067617_1 PFAM Na-Ca exchanger integrin-beta4 peptidase-like FG-GAP K20276 - - 0.000000000000000000000000000000000502 145.0
BYD3_k127_5083471_0 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily K01465 - 3.5.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004303 432.0
BYD3_k127_5083471_1 Belongs to the ATCase OTCase family K00609 GO:0003674,GO:0003824,GO:0004070,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016741,GO:0016743,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001025 375.0
BYD3_k127_5083471_2 Belongs to the purine pyrimidine phosphoribosyltransferase family. PyrR subfamily K02825 - 2.4.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000002928 244.0
BYD3_k127_5083567_0 amino acid - - - 3.705e-234 741.0
BYD3_k127_5083567_1 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384,K22345 GO:0000166,GO:0003674,GO:0003824,GO:0004791,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0009636,GO:0009987,GO:0015036,GO:0016209,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0036094,GO:0042221,GO:0043167,GO:0043168,GO:0044424,GO:0044444,GO:0044464,GO:0048037,GO:0050660,GO:0050662,GO:0050896,GO:0051716,GO:0055114,GO:0070887,GO:0097159,GO:0097237,GO:0098754,GO:0098869,GO:1901265,GO:1901363,GO:1990748 1.8.1.9,4.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003441 387.0
BYD3_k127_5083567_10 ATP-dependent protease La (LON) substrate-binding domain K01338,K07157 - 3.4.21.53 0.0000000000000001288 90.0
BYD3_k127_5083567_11 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.00000000000001422 78.0
BYD3_k127_5083567_2 aldo keto reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005104 336.0
BYD3_k127_5083567_3 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002941 340.0
BYD3_k127_5083567_4 Fe-S protein K18979 - 1.17.99.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002763 316.0
BYD3_k127_5083567_5 Cytochrome C assembly protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003124 315.0
BYD3_k127_5083567_6 SMART Tetratricopeptide domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002912 283.0
BYD3_k127_5083567_7 SMART phosphoesterase PHP domain protein K07053 - 3.1.3.97 0.000000000000000000000000000000000000000000000000000000000005801 220.0
BYD3_k127_5083567_8 4Fe-4S single cluster domain of Ferredoxin I - - - 0.0000000000000000000000000000109 123.0
BYD3_k127_5083567_9 Cytochrome c biogenesis protein - - - 0.0000000000000000001407 104.0
BYD3_k127_510096_0 peptidase S9 prolyl oligopeptidase active site K01303 - 3.4.19.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003153 465.0
BYD3_k127_510096_1 PFAM Aldo keto reductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002194 453.0
BYD3_k127_510096_2 Thrombospondin type 3 repeat K03286 - - 0.0000000000000000000000000001868 128.0
BYD3_k127_510096_3 - - - - 0.0000000006653 69.0
BYD3_k127_5102072_0 Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family K00207,K12527,K17723 - 1.3.1.1,1.3.1.2,1.97.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001683 492.0
BYD3_k127_5102072_1 protein kinase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006602 338.0
BYD3_k127_5102072_2 Domain of unknown function (DUF1731) K07071 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005259 312.0
BYD3_k127_5102072_3 Domain of unknown function (DUF296) K06934 - - 0.000000000000000000000656 104.0
BYD3_k127_5105013_0 WD40-like Beta Propeller Repeat K03641,K07277 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004325 332.0
BYD3_k127_5105013_1 Inositol monophosphatase family K01092 - 3.1.3.25 0.000000000000000000000000000000000000000000000000000000000000000000002561 246.0
BYD3_k127_5105013_2 extracellular matrix structural constituent - - - 0.00000000000000000000001097 106.0
BYD3_k127_5105594_0 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001018 561.0
BYD3_k127_5105594_1 PFAM Nucleotidyl transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001876 280.0
BYD3_k127_5105594_2 Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate K01712 - 4.2.1.49 0.000000000000000000000000000000000000004254 151.0
BYD3_k127_5105594_3 PFAM NAD-dependent epimerase dehydratase K01710 - 4.2.1.46 0.0000000000002048 71.0
BYD3_k127_5105594_4 Fibronectin type 3 domain - - - 0.000000001067 72.0
BYD3_k127_5113447_0 PFAM blue (type 1) copper domain protein - - - 4.147e-222 702.0
BYD3_k127_5113447_1 Protein kinase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001046 325.0
BYD3_k127_5113447_3 A domain in the BMP inhibitor chordin and in microbial proteins. - - - 0.00005707 56.0
BYD3_k127_5118180_0 Glucose / Sorbosone dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002293 367.0
BYD3_k127_5118180_1 - - - - 0.000000000000000000000000000000000000001358 155.0
BYD3_k127_5118180_2 FMN_bind - - - 0.00000000000000000000000000000000000001624 152.0
BYD3_k127_5118180_3 protein flavinylation K03734 - 2.7.1.180 0.000000000000000000000000000002387 132.0
BYD3_k127_5118180_4 Pfam Transposase IS66 - - - 0.00000000000002273 78.0
BYD3_k127_5143130_0 Pirin C-terminal cupin domain K06911 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001521 547.0
BYD3_k127_5143130_1 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003591 259.0
BYD3_k127_5143130_10 DoxX-like family - - - 0.000000000000000000000000000000000002696 142.0
BYD3_k127_5143130_11 YjbR - - - 0.00000000000000000000000000000000001205 142.0
BYD3_k127_5143130_12 Alkylmercury lyase - - - 0.00000000000000000005984 95.0
BYD3_k127_5143130_13 dead deah K03724 - - 0.0000000000000000001263 90.0
BYD3_k127_5143130_14 TOBE domain - - - 0.0000000000000000001323 93.0
BYD3_k127_5143130_15 PFAM 6-O-methylguanine DNA methyltransferase, DNA binding domain K07443 - - 0.000000000002633 70.0
BYD3_k127_5143130_17 Alkylmercury lyase - - - 0.000000002122 60.0
BYD3_k127_5143130_2 Excises ethenocytosine and uracil, which can arise by alkylation or deamination of cytosine, respectively, from the corresponding mispairs with guanine in ds-DNA. It is capable of hydrolyzing the carbon-nitrogen bond between the sugar-phosphate backbone of the DNA and the mispaired base. The complementary strand guanine functions in substrate recognition. Required for DNA damage lesion repair in stationary-phase cells K03649 - 3.2.2.28 0.0000000000000000000000000000000000000000000000000000000000000000001351 244.0
BYD3_k127_5143130_3 - - - - 0.00000000000000000000000000000000000000000000000000000000001268 211.0
BYD3_k127_5143130_4 methyltransferase - - - 0.0000000000000000000000000000000000000000000000002457 187.0
BYD3_k127_5143130_5 Glyoxalase-like domain - - - 0.0000000000000000000000000000000000000000000009812 173.0
BYD3_k127_5143130_6 lactoylglutathione lyase activity K08234 - - 0.000000000000000000000000000000000000000000001458 168.0
BYD3_k127_5143130_7 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) - - - 0.000000000000000000000000000000000000000000007157 169.0
BYD3_k127_5143130_8 acetyltransferase - - - 0.000000000000000000000000000000000001548 147.0
BYD3_k127_5143130_9 nUDIX hydrolase - - - 0.000000000000000000000000000000000002473 141.0
BYD3_k127_5148829_0 ASPIC and UnbV - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009374 356.0
BYD3_k127_5148829_1 ASPIC and UnbV - - - 0.00000000000000001867 96.0
BYD3_k127_5148829_2 Tetratricopeptide repeat - - - 0.0000000000002462 84.0
BYD3_k127_5212052_0 extracellular matrix structural constituent - - - 0.0001757 55.0
BYD3_k127_5227479_0 PD-(D/E)XK nuclease superfamily - - - 0.000000000119 75.0
BYD3_k127_5237357_0 Sigma factor PP2C-like phosphatases K07315 - 3.1.3.3 0.0000000000000000000000000000000000000000000000000000000197 224.0
BYD3_k127_5237357_1 LppC putative lipoprotein K07121 - - 0.00005907 53.0
BYD3_k127_5248170_0 cellulase activity - - - 1.087e-224 724.0
BYD3_k127_5248170_1 Possible lysine decarboxylase K06966 - 3.2.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003018 317.0
BYD3_k127_5248170_2 Hsp33 protein K04083 - - 0.0000000000000000000000000000000000000001021 162.0
BYD3_k127_5248170_3 Transport and Golgi organisation 2 - - - 0.0000000000000000000000000000000002183 150.0
BYD3_k127_5258996_0 COG0471 Di- and tricarboxylate - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003993 447.0
BYD3_k127_5258996_2 Sulfatase - - - 0.000000000000000000000000000000000000000008578 175.0
BYD3_k127_5258996_3 Putative diguanylate phosphodiesterase - - - 0.000009837 56.0
BYD3_k127_5273909_0 6-pyruvoyl tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.00000000000000000000000000000000000000000000000005125 180.0
BYD3_k127_5273909_1 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) K09457 - 1.7.1.13 0.0000000000000000000000000000000000000003502 156.0
BYD3_k127_5273909_2 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 - 4.3.99.3 0.0000000000000000000000000000000000000008378 151.0
BYD3_k127_5273909_3 YARHG - - - 0.000000000000000000000000163 119.0
BYD3_k127_5273909_4 Parallel beta-helix repeats - - - 0.0000005057 62.0
BYD3_k127_5273909_5 guanyl-nucleotide exchange factor activity - - - 0.0000008839 61.0
BYD3_k127_5273909_6 cellulose binding - - - 0.00004266 50.0
BYD3_k127_528080_0 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001355 289.0
BYD3_k127_528080_1 ABC-2 family transporter protein K01992 - - 0.0000000000004067 81.0
BYD3_k127_5296916_0 BadF/BadG/BcrA/BcrD ATPase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005084 320.0
BYD3_k127_5296916_1 Acetyltransferase (GNAT) family - - - 0.00000000000000000000000004191 115.0
BYD3_k127_5296916_2 methyltransferase K15256 - - 0.0000000000003315 72.0
BYD3_k127_5300_0 Belongs to the class-II aminoacyl-tRNA synthetase family K04567,K04568 GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0004812,GO:0004824,GO:0005488,GO:0005524,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006430,GO:0006518,GO:0006520,GO:0006629,GO:0006644,GO:0006650,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009059,GO:0009405,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019637,GO:0019752,GO:0030312,GO:0030322,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0040007,GO:0042221,GO:0042391,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0046471,GO:0046483,GO:0046486,GO:0046677,GO:0046872,GO:0050896,GO:0051704,GO:0065007,GO:0065008,GO:0071704,GO:0071944,GO:0090304,GO:0090407,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.1.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003262 497.0
BYD3_k127_5300_1 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 GO:0003674,GO:0003676,GO:0003723,GO:0003747,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0016149,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001754 397.0
BYD3_k127_5300_2 lipoprotein releasing system, transmembrane protein, LolC E family K09808 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005702 289.0
BYD3_k127_5300_3 Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner K09810 - - 0.000000000000000000000000000000000000000000000000000000000000000000000299 250.0
BYD3_k127_5300_4 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.0000000000000000000000000000000000000000000003766 170.0
BYD3_k127_5300_5 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 GO:0000166,GO:0001882,GO:0001884,GO:0002135,GO:0003674,GO:0003824,GO:0004140,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017076,GO:0018130,GO:0019103,GO:0019438,GO:0019637,GO:0019693,GO:0030554,GO:0032549,GO:0032551,GO:0032552,GO:0032553,GO:0032554,GO:0032557,GO:0032558,GO:0032564,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0036094,GO:0040007,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.7.1.24 0.000000000000000000000000000000000008433 145.0
BYD3_k127_5300_6 UvrB/uvrC motif K19411 GO:0003674,GO:0005488,GO:0005507,GO:0006950,GO:0008150,GO:0008270,GO:0010035,GO:0010038,GO:0042221,GO:0043167,GO:0043169,GO:0046686,GO:0046688,GO:0046870,GO:0046872,GO:0046914,GO:0050896,GO:0050897,GO:0097501,GO:1990169,GO:1990170 - 0.00000000000000000000005808 111.0
BYD3_k127_5300_7 Catalyzes the specific phosphorylation of arginine residues in proteins K19405 - 2.7.14.1 0.0000000000000001225 85.0
BYD3_k127_5307659_0 TIGRFAM type VI secretion protein, EvpB VC_A0108 family K11900 - - 3.796e-196 631.0
BYD3_k127_5307659_1 Isocitrate dehydrogenase K00031 - 1.1.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004881 557.0
BYD3_k127_5307659_10 TIGRFAM Type VI secretion system, lysozyme-related K11897 - - 0.00000000000000002129 94.0
BYD3_k127_5307659_11 Type VI secretion system effector, Hcp - - - 0.000000001824 66.0
BYD3_k127_5307659_2 TIGRFAM type VI secretion protein, VC_A0110 family K11896 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008406 534.0
BYD3_k127_5307659_3 Histidine ammonia-lyase K01745 - 4.3.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001072 460.0
BYD3_k127_5307659_4 Protein conserved in bacteria K11902 - - 0.00000000000000000000000000000000000000000000000000007818 200.0
BYD3_k127_5307659_5 Type VI secretion system, VipA, VC_A0107 or Hcp2 K11901 - - 0.000000000000000000000000000000000000000000000000001057 189.0
BYD3_k127_5307659_6 Protein of avirulence locus involved in temperature-dependent protein secretion K03217,K11898 - - 0.000000000000000000000000000000000000000002352 168.0
BYD3_k127_5307659_7 PTS IIA-like nitrogen-regulatory protein PtsN K02806 - - 0.000000000000000000001549 101.0
BYD3_k127_5307659_8 Amidohydrolase family - - - 0.000000000000000000005969 103.0
BYD3_k127_5307659_9 Type VI secretion system effector, Hcp K11903 - - 0.0000000000000000004725 93.0
BYD3_k127_5318804_0 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000004633 167.0
BYD3_k127_5318804_1 PFAM MotA TolQ ExbB proton channel K03561 - - 0.00000000000000000000000000000003725 140.0
BYD3_k127_5318804_2 repeat-containing protein - - - 0.000004097 58.0
BYD3_k127_5318804_3 Biopolymer transport protein ExbD TolR K03559 - - 0.0003058 49.0
BYD3_k127_532656_0 Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001468 405.0
BYD3_k127_532656_1 PFAM peptidase M48 Ste24p - - - 0.0000000000000000000000000000000000000000000000000000000000004031 224.0
BYD3_k127_532656_2 Domains HisKA, HATPase_c - - - 0.000000000000000000000000000000000001068 155.0
BYD3_k127_532656_3 belongs to the thioredoxin family K03671 - - 0.000000000000000000000000001179 113.0
BYD3_k127_5327593_0 Glycosyl transferase, family 2 - - - 0.0000000000000000000000000000000000000000000000000000000009546 211.0
BYD3_k127_5327593_1 Tetratricopeptide repeat protein - - - 0.00000000000000000000000000000000000000000000000001522 202.0
BYD3_k127_5327593_2 PFAM SMP-30 Gluconolaconase - - - 0.0000000000000000000000000000000000000000000000001847 190.0
BYD3_k127_5327593_3 D,D-heptose 1,7-bisphosphate phosphatase K03273 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008270,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0034200,GO:0042578,GO:0043167,GO:0043169,GO:0044237,GO:0046872,GO:0046914 3.1.3.82,3.1.3.83 0.000000000000000000000000000000000000005951 156.0
BYD3_k127_5354913_0 tRNA synthetase class II core domain (G, H, P, S and T) K01892 - 6.1.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008556 430.0
BYD3_k127_5354913_1 PFAM Sulfite exporter TauE SafE K07090 - - 0.000000000000000000000000000000000000000001894 166.0
BYD3_k127_5354913_2 Tetratricopeptide repeat - - - 0.0000000000000000000002155 106.0
BYD3_k127_5354913_3 Bacterial transcriptional repressor C-terminal K16137 - - 0.000000000000002458 86.0
BYD3_k127_5354913_4 VanZ like family - - - 0.0000000001512 68.0
BYD3_k127_5354913_5 Helix-turn-helix domain - - - 0.0000005089 58.0
BYD3_k127_5359239_0 TRCF K03723 - - 1.167e-234 754.0
BYD3_k127_5359239_1 Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) K00097,K22024 - 1.1.1.262,1.1.1.408,1.1.1.409 0.000000000000000000000000000000000000000000000000000000000000000000000000005958 263.0
BYD3_k127_5359239_2 ABC transporter K09812 - - 0.00000000000000000000000000000000000000000000000000000000000003084 222.0
BYD3_k127_5359239_3 PPIC-type PPIASE domain K03771 - 5.2.1.8 0.00000000000000000000000000000000000000000002229 179.0
BYD3_k127_5359239_4 peptidylprolyl isomerase K03769,K07533 - 5.2.1.8 0.000000000000000000000002424 119.0
BYD3_k127_5359239_5 PFAM PpiC-type peptidyl-prolyl cis-trans isomerase K01802,K03769 - 5.2.1.8 0.0000000000008736 81.0
BYD3_k127_5359239_6 Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation K09811 - - 0.000001551 57.0
BYD3_k127_537561_0 Sigma-70, region 4 K03088 - - 0.00000000000000000000000000000000001141 143.0
BYD3_k127_537561_1 PHP domain protein - - - 0.0000000000000000000002252 111.0
BYD3_k127_537561_2 An anti-sigma factor for extracytoplasmic function (ECF) sigma factor SigK. ECF sigma factors are held in an inactive form by an anti-sigma factor until released by regulated intramembrane proteolysis (RIP). RIP occurs when an extracytoplasmic signal triggers a concerted proteolytic cascade to transmit information and elicit cellular responses. The membrane-spanning regulatory substrate protein is first cut extracytoplasmically (site-1 protease, S1P), then within the membrane itself (site-2 protease, S2P, Rip1), while cytoplasmic proteases finish degrading the regulatory protein, liberating the sigma factor - - - 0.0000000003778 72.0
BYD3_k127_537561_3 type IV pilus biogenesis stability protein PilW K02656 - - 0.0000005571 63.0
BYD3_k127_5403203_0 Maf-like protein K06287 GO:0000278,GO:0000281,GO:0000910,GO:0000917,GO:0005575,GO:0005623,GO:0007049,GO:0008150,GO:0009987,GO:0016043,GO:0022402,GO:0022607,GO:0030428,GO:0032506,GO:0044085,GO:0044464,GO:0051301,GO:0061640,GO:0071840,GO:0090529,GO:1902410,GO:1903047 - 0.000000000000000000000000000000000000000000004685 175.0
BYD3_k127_5403203_1 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 GO:0002161,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006399,GO:0006450,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0034641,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0051499,GO:0051500,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:1901360 - 0.000000000000000000000001964 114.0
BYD3_k127_5403203_2 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0019509,GO:0019752,GO:0043094,GO:0043102,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046523,GO:0071265,GO:0071267,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.23 0.0000000000075 73.0
BYD3_k127_5406231_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 2.636e-223 700.0
BYD3_k127_5406231_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004257 298.0
BYD3_k127_5406231_2 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000738 258.0
BYD3_k127_5406231_3 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000001796 87.0
BYD3_k127_5407210_0 flagellar motor switch protein FliM K02416 - - 0.000000000000000000000000000000000000000000000000000002268 204.0
BYD3_k127_5407210_1 Histidine kinase K07716 - 2.7.13.3 0.000000000000000000000000000000000000003421 159.0
BYD3_k127_5407210_2 PFAM peptidase - - - 0.000000000000000002357 99.0
BYD3_k127_5407210_3 Flagellar motor switch protein FliN K02417 - - 0.0000000000001088 83.0
BYD3_k127_5407210_4 PA14 domain - - - 0.0000002241 59.0
BYD3_k127_5407210_5 Trehalose utilisation K01179 - 3.2.1.4 0.00002392 56.0
BYD3_k127_5417043_0 TIGRFAM methylmalonyl-CoA mutase N-terminal domain K01848 - 5.4.99.2 8.155e-221 700.0
BYD3_k127_5417043_1 Peptidase dimerisation domain K01436,K01438,K01439 - 3.5.1.16,3.5.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001557 489.0
BYD3_k127_5417043_10 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.0000000000000000000004685 99.0
BYD3_k127_5417043_11 Phytol kinase K15892,K18678 - 2.7.1.182,2.7.1.216 0.000000000000003197 86.0
BYD3_k127_5417043_12 GDSL-like Lipase/Acylhydrolase - - - 0.000000000003169 76.0
BYD3_k127_5417043_13 Helix-turn-helix domain - - - 0.000000002413 61.0
BYD3_k127_5417043_2 acyl-CoA dehydrogenase K00249 - 1.3.8.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005341 411.0
BYD3_k127_5417043_3 Coenzyme A transferase K01027,K01028,K01034 - 2.8.3.5,2.8.3.8,2.8.3.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000731 304.0
BYD3_k127_5417043_4 PFAM Coenzyme A transferase K01029 - 2.8.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002654 276.0
BYD3_k127_5417043_5 ArgK protein K07588 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000111 280.0
BYD3_k127_5417043_6 cobalamin binding K01849 - 5.4.99.2 0.0000000000000000000000000000000000000000000000681 172.0
BYD3_k127_5417043_7 TIGRFAM Methylmalonyl-CoA mutase, C-terminal K01849 - 5.4.99.2 0.0000000000000000000000000000000000000000007217 180.0
BYD3_k127_5417043_8 Lamin Tail Domain - - - 0.00000000000000000000000003006 119.0
BYD3_k127_5417043_9 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530,K05788 - - 0.000000000000000000000001299 108.0
BYD3_k127_5527268_0 PFAM Aminotransferase class I and II - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001561 501.0
BYD3_k127_5527268_1 serine-type endopeptidase activity - - - 0.0000000000000000000000007711 113.0
BYD3_k127_5529494_0 Protein of unknown function (DUF3810) - - - 0.0000000000000000000000000000000000000005576 164.0
BYD3_k127_5529494_1 PFAM UTP--glucose-1-phosphate uridylyltransferase K00963 - 2.7.7.9 0.00000000008849 63.0
BYD3_k127_5535646_0 COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005768 387.0
BYD3_k127_5535646_1 von Willebrand factor, type A - - - 0.0000000000000000000000000000000000000000000000000000000000692 216.0
BYD3_k127_5535646_2 glyoxalase bleomycin resistance protein dioxygenase K04750 - - 0.00000000000000000000000000000000000000000000000000000006665 198.0
BYD3_k127_5535646_3 pyridoxamine 5-phosphate - - - 0.00000000000000000000000000000009311 130.0
BYD3_k127_5535646_4 PrcB C-terminal - - - 0.000000000000000000000005419 107.0
BYD3_k127_5538222_0 belongs to the aldehyde dehydrogenase family K00294 - 1.2.1.88 6.332e-240 752.0
BYD3_k127_5538222_1 Belongs to the aldehyde dehydrogenase family K00128 - 1.2.1.3 9.58e-205 654.0
BYD3_k127_5538222_2 PFAM Glutamine synthetase, catalytic K01915 - 6.3.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001417 472.0
BYD3_k127_5538222_3 COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs K00375 - - 0.0000000000000001824 90.0
BYD3_k127_5538222_4 DinB family - - - 0.00000000000007856 83.0
BYD3_k127_5538222_5 - - - - 0.00000000002707 70.0
BYD3_k127_5556687_0 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain - - - 6.952e-245 778.0
BYD3_k127_5556687_1 ATP dependent DNA ligase C terminal region K10747 - 6.5.1.1,6.5.1.6,6.5.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006951 609.0
BYD3_k127_5556687_10 Protein of unknown function, DUF488 - - - 0.000000000000000000000007712 106.0
BYD3_k127_5556687_2 Glycosyltransferase Family 4 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004212 474.0
BYD3_k127_5556687_3 copper resistance - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002129 263.0
BYD3_k127_5556687_4 Exonuclease of the beta-lactamase fold involved in RNA processing K07577 - - 0.000000000000000000000000000000000000000000000000000000000000000002086 232.0
BYD3_k127_5556687_5 Exonuclease of the beta-lactamase fold involved in RNA processing K07577 - - 0.0000000000000000000000000000000000000000000000000000000000958 209.0
BYD3_k127_5556687_6 Cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000000005217 209.0
BYD3_k127_5556687_7 Removes the phosphate from trehalose 6-phosphate to produce free trehalose K01087 - 3.1.3.12 0.00000000000000000000000000000000000000000000000002885 192.0
BYD3_k127_5556687_8 DoxX K15977 - - 0.000000000000000000000000000000000000000000000002203 177.0
BYD3_k127_5556687_9 glycosyl transferase family K00697 - 2.4.1.15,2.4.1.347 0.000000000000000000000000000000003021 130.0
BYD3_k127_5580959_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 1.904e-231 727.0
BYD3_k127_5580959_1 MoeA N-terminal region (domain I and II) K03750 - 2.10.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006133 313.0
BYD3_k127_5580959_2 arylsulfatase A - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000358 276.0
BYD3_k127_5580959_3 COG1874 Beta-galactosidase - - - 0.000000000000000000000000000000000000000000000000000000000000001 233.0
BYD3_k127_5580959_4 Histidine kinase HAMP - - - 0.00000000000000000000000000000000000000009645 165.0
BYD3_k127_5580959_5 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0009987,GO:0010033,GO:0016032,GO:0016465,GO:0019058,GO:0019068,GO:0032991,GO:0035966,GO:0042221,GO:0042802,GO:0043167,GO:0043169,GO:0044403,GO:0044419,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046872,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0051704,GO:0061077,GO:0101031,GO:1990220 - 0.0000000000000000000000000000000004247 134.0
BYD3_k127_5580959_6 PFAM CutA1 divalent ion tolerance protein K03926 - - 0.00000000000000007083 90.0
BYD3_k127_5584254_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 GO:0000166,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.1.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002823 452.0
BYD3_k127_5584254_1 Participates in initiation and elongation during chromosome replication K02314 GO:0003674,GO:0003678,GO:0003824,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006268,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0032392,GO:0032508,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051276,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:1901360,GO:1901576 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000109 425.0
BYD3_k127_5584254_2 glutamate-tRNA ligase activity K01885,K09698 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 6.1.1.17,6.1.1.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002083 372.0
BYD3_k127_5584254_3 Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl- D-erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2- phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4- cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF) K01770,K12506 - 2.7.7.60,4.6.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102 326.0
BYD3_k127_5584254_4 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000004083 292.0
BYD3_k127_5584254_5 photosystem I assembly BtpA K06971 - - 0.000000000000000000000000000000000000000000000000000000000000000003783 238.0
BYD3_k127_5584254_6 Uracil DNA glycosylase superfamily K21929 - 3.2.2.27 0.000000000000000000000000000000000000000000000000000000003409 202.0
BYD3_k127_5584254_7 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.0000000000000002523 79.0
BYD3_k127_5584254_8 Acetyltransferase (GNAT) domain - - - 0.0000001048 63.0
BYD3_k127_5584254_9 - - - - 0.00001355 48.0
BYD3_k127_5597164_0 - - - - 0.00000000000000000000000000000000001098 154.0
BYD3_k127_5611221_0 form. Deacetylates the N-terminal lysine residue of Alba, the major archaeal chromatin protein and that, in turn, increases Alba's DNA binding affinity, thereby repressing transcription K12410 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000006613 263.0
BYD3_k127_5611221_1 Probable molybdopterin binding domain - - - 0.0000000000000000000000000000000000000000006178 163.0
BYD3_k127_5611221_2 von Willebrand factor type A domain - - - 0.00000000364 68.0
BYD3_k127_5623728_0 Cytochrome c554 and c-prime - - - 0.000000000000000000000000000000000000001232 162.0
BYD3_k127_5633393_0 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000256 448.0
BYD3_k127_5633393_1 Belongs to the UPF0403 family - - - 0.00000000000000000000000000000000000004411 147.0
BYD3_k127_5644980_0 DNA polymerase III alpha subunit K02337 - 2.7.7.7 2.092e-263 832.0
BYD3_k127_5686430_0 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006724 294.0
BYD3_k127_5686430_1 arylsulfatase A - - - 0.0000000001837 65.0
BYD3_k127_5686430_2 pectinesterase activity - - - 0.00000006269 65.0
BYD3_k127_5702912_0 Catalyzes the formation of a hydroxyacyl-CoA by addition of water on enoyl-CoA. Also exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities K01782 GO:0003674,GO:0003824,GO:0003857,GO:0004300,GO:0006082,GO:0006629,GO:0006631,GO:0006635,GO:0008150,GO:0008152,GO:0008692,GO:0009056,GO:0009062,GO:0009987,GO:0016042,GO:0016054,GO:0016491,GO:0016614,GO:0016616,GO:0016829,GO:0016835,GO:0016836,GO:0016853,GO:0016854,GO:0016856,GO:0019395,GO:0019752,GO:0030258,GO:0032787,GO:0034440,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0046395,GO:0055114,GO:0071704,GO:0072329,GO:1901575 1.1.1.35,4.2.1.17,5.1.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001926 469.0
BYD3_k127_5702912_1 Belongs to the thiolase family K00626,K00632 - 2.3.1.16,2.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001454 425.0
BYD3_k127_5702912_2 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis K21071 - 2.7.1.11,2.7.1.90 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001073 416.0
BYD3_k127_5702912_3 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 - 2.5.1.3 0.00000000000000000000000000000000000000000000000000006891 194.0
BYD3_k127_5702912_4 esterase of the alpha-beta hydrolase superfamily K07001 - - 0.00000000000000000000000000000000000000000000000000008576 198.0
BYD3_k127_5702912_5 Glycosyl transferases group 1 - - - 0.0000000000000000000003089 106.0
BYD3_k127_5702912_6 Uncharacterised protein family (UPF0158) - - - 0.0000000000001665 77.0
BYD3_k127_5702912_7 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella - - - 0.000001926 59.0
BYD3_k127_5710452_0 Aconitase C-terminal domain K01681 - 4.2.1.3 7.504e-258 813.0
BYD3_k127_5710452_1 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001799 457.0
BYD3_k127_5710452_2 Belongs to the enoyl-CoA hydratase isomerase family K01715 - 4.2.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000455 250.0
BYD3_k127_5710452_3 Methyltransferase domain - - - 0.00000000001123 76.0
BYD3_k127_5710555_0 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) K06920 - 6.3.4.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001913 295.0
BYD3_k127_5710555_1 Uncharacterised protein family UPF0047 - - - 0.0000000000000000000000000000000000000000002248 167.0
BYD3_k127_5710555_2 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K04068,K10026 - 1.97.1.4,4.3.99.3 0.000000000000000000000000000000000000000008018 159.0
BYD3_k127_5710555_3 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 0.0000000000000000000000000000000000000004119 165.0
BYD3_k127_5710555_4 Belongs to the short-chain dehydrogenases reductases (SDR) family K00059 - 1.1.1.100 0.00000000000000000000000000000000000002088 156.0
BYD3_k127_5710555_5 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.0000000000000000000000000000000000008503 156.0
BYD3_k127_5719123_0 component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00163 - 1.2.4.1 0.0 1045.0
BYD3_k127_5719123_1 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004976 490.0
BYD3_k127_5719123_2 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000001444 251.0
BYD3_k127_5719123_3 ECF sigma factor K03088 - - 0.0000000000000000000000000000000000000007236 159.0
BYD3_k127_5719123_4 Belongs to the peptidase S1C family K04691,K04772 - - 0.0000000000000000000000000002665 128.0
BYD3_k127_5719123_5 Putative zinc-finger - - - 0.0000000008915 68.0
BYD3_k127_5719123_6 Pfam:DUF2029 - - - 0.0004124 52.0
BYD3_k127_5720637_0 oligoendopeptidase F K08602 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004214 609.0
BYD3_k127_5720637_1 Participates in initiation and elongation during chromosome replication - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004576 388.0
BYD3_k127_5720637_2 domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000007874 255.0
BYD3_k127_5720637_3 Regulator of peptidoglycan synthesis that is essential for the function of penicillin-binding protein 1B (PBP1b) K07337,K21008 GO:0000270,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008047,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009279,GO:0009987,GO:0016020,GO:0019867,GO:0019899,GO:0030203,GO:0030234,GO:0030312,GO:0030313,GO:0031241,GO:0031975,GO:0034645,GO:0042546,GO:0043085,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044093,GO:0044237,GO:0044249,GO:0044260,GO:0044425,GO:0044462,GO:0044464,GO:0050790,GO:0065007,GO:0065009,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:0071944,GO:0098552,GO:0098772,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000205 207.0
BYD3_k127_5720637_4 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides - - - 0.0000000000000000000000000000000000000000006787 180.0
BYD3_k127_5720637_5 Protein conserved in bacteria K09859 - - 0.000611 46.0
BYD3_k127_5728062_0 BlaR1 peptidase M56 - - - 0.0000000000000000000000000000000000000000000000004919 196.0
BYD3_k127_573871_0 elongation factor Tu domain 2 protein K02355 - - 1.761e-194 628.0
BYD3_k127_573871_1 transcriptional regulatory protein - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002326 318.0
BYD3_k127_573871_2 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 - 3.1.22.4 0.00000000000000000003596 94.0
BYD3_k127_5744824_0 NmrA-like family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000038 363.0
BYD3_k127_5744824_1 FAD dependent oxidoreductase K00111 - 1.1.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000004879 290.0
BYD3_k127_5744824_2 Putative S-adenosyl-L-methionine-dependent methyltransferase - - - 0.00000000002132 74.0
BYD3_k127_5765776_0 2-oxoglutarate dehydrogenase N-terminus K00164 - 1.2.4.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002824 605.0
BYD3_k127_5765776_1 Cytochrome oxidase assembly protein K02259,K03110 - - 0.00000000000000000000000000000000000007318 158.0
BYD3_k127_5767059_0 PFAM Histone deacetylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000185 299.0
BYD3_k127_5767059_1 Protein kinase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001066 286.0
BYD3_k127_5767059_2 domain, Protein - - - 0.000000000000000000000000004204 117.0
BYD3_k127_5767059_3 acylphosphatase activity K01512 GO:0003674,GO:0003824,GO:0003998,GO:0016787,GO:0016817,GO:0016818 3.6.1.7 0.00000000000000000000006114 102.0
BYD3_k127_5767059_4 Serine protease with a broad substrate specificity K17734 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005488,GO:0005509,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0016787,GO:0017171,GO:0019538,GO:0043167,GO:0043169,GO:0043170,GO:0044238,GO:0046872,GO:0070011,GO:0071704,GO:0140096,GO:1901564 - 0.0000000000000000006447 102.0
BYD3_k127_5767059_5 Protein of unknown function, DUF393 - - - 0.0000000000000009321 82.0
BYD3_k127_5767059_6 extracellular matrix structural constituent - - - 0.00000000003323 77.0
BYD3_k127_5767059_7 Serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.00000005072 57.0
BYD3_k127_5846542_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001201 492.0
BYD3_k127_5846542_1 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001258 394.0
BYD3_k127_5846542_2 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family K03309 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001817 341.0
BYD3_k127_5846542_3 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000000000556 100.0
BYD3_k127_5848223_0 Required for chromosome condensation and partitioning K03529 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002593 569.0
BYD3_k127_5848223_1 Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis K01042,K17468 - 2.9.1.1,4.3.1.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003155 402.0
BYD3_k127_5848223_2 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) K03110 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001095 304.0
BYD3_k127_5848223_3 PFAM Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000913 145.0
BYD3_k127_5848223_4 response regulator receiver - - - 0.000000000000000000001423 110.0
BYD3_k127_5848223_5 GGDEF domain containing protein - - - 0.000000000000000004928 98.0
BYD3_k127_5848223_6 Methyltransferase domain - - - 0.0000000000000001396 90.0
BYD3_k127_5848223_7 Sporulation related domain - - - 0.00000000002287 77.0
BYD3_k127_5868857_0 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004748 368.0
BYD3_k127_5868857_1 PFAM Tetratricopeptide TPR_1 repeat-containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000002304 259.0
BYD3_k127_5868857_2 Cupin 2, conserved barrel domain protein - - - 0.0000000000000000000000000000001673 129.0
BYD3_k127_5868857_3 Molybdopterin K03635 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006725,GO:0006732,GO:0006753,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009144,GO:0009150,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0016740,GO:0016782,GO:0016783,GO:0018130,GO:0019538,GO:0019637,GO:0019693,GO:0019720,GO:0030366,GO:0032324,GO:0034641,GO:0042278,GO:0043170,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046039,GO:0046128,GO:0046483,GO:0051186,GO:0051188,GO:0051189,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657 2.8.1.12 0.0000000000000000000000000001389 121.0
BYD3_k127_5868857_4 Parallel beta-helix repeats - - - 0.00000000000000005312 93.0
BYD3_k127_5868857_5 Conserved repeat domain - - - 0.000000006999 68.0
BYD3_k127_5868857_6 Mo-molybdopterin cofactor metabolic process K03636,K21142 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006732,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0018130,GO:0019538,GO:0019637,GO:0019720,GO:0043170,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0051189,GO:0071704,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.8.1.12 0.0000008271 54.0
BYD3_k127_5872397_0 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 - 2.3.1.234 0.00000000000000000000000000000000000000000000000000000000000005074 233.0
BYD3_k127_5872397_1 DNA polymerase III, delta subunit K02341 - 2.7.7.7 0.0000000000000000172 98.0
BYD3_k127_5872397_2 PFAM YbbR-like protein - - - 0.00000000000002677 85.0
BYD3_k127_5872397_3 DNA polymerase III, delta' subunit K02340 - 2.7.7.7 0.000000004742 68.0
BYD3_k127_5886472_0 C-terminal, D2-small domain, of ClpB protein K11907 - - 1.153e-313 989.0
BYD3_k127_5886472_1 Phage late control gene D protein (GPD) K11904 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002043 529.0
BYD3_k127_5886472_2 Pfam:T6SS_VasB K11895 - - 0.00000000000000000000000000000000000000000000000000000000000000000005089 244.0
BYD3_k127_5886472_4 peptidyl-tyrosine sulfation - - - 0.000000000000000000000705 106.0
BYD3_k127_5886472_5 - - - - 0.000001302 55.0
BYD3_k127_589770_0 dihydrolipoamide dehydrogenase K00382 - 1.8.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003012 502.0
BYD3_k127_589770_1 Transketolase, pyrimidine binding domain K00167 - 1.2.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002129 451.0
BYD3_k127_589770_2 e3 binding domain K00658 - 2.3.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001052 392.0
BYD3_k127_589770_3 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor K00161,K11381,K21416 - 1.2.4.1,1.2.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003587 306.0
BYD3_k127_589770_4 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 - 2.3.1.181 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006359 288.0
BYD3_k127_589770_5 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.00000000000000000000000000000000000000000000000000000000000000006188 234.0
BYD3_k127_5908788_0 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006072 350.0
BYD3_k127_5908788_1 Trypsin-like peptidase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008958 284.0
BYD3_k127_5908788_2 Trypsin-like peptidase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001339 254.0
BYD3_k127_5908788_3 Bacterial regulatory proteins, luxR family - - - 0.0000000000000000000000000000000000000000006552 166.0
BYD3_k127_5908788_4 Glycosyltransferase Family 4 - - - 0.000000000000199 74.0
BYD3_k127_5911771_0 Cyclopropane-fatty-acyl-phospholipid synthase K00574 GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008168,GO:0008610,GO:0008757,GO:0009058,GO:0009059,GO:0009273,GO:0009987,GO:0016020,GO:0016053,GO:0016740,GO:0016741,GO:0019752,GO:0030312,GO:0032259,GO:0032787,GO:0034645,GO:0042546,GO:0043170,GO:0043436,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044281,GO:0044283,GO:0044464,GO:0046394,GO:0070589,GO:0071554,GO:0071704,GO:0071766,GO:0071767,GO:0071768,GO:0071840,GO:0071944,GO:0072330,GO:1901576 2.1.1.79 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000265 425.0
BYD3_k127_5911771_1 Pyridoxal-phosphate dependent enzyme K01733 - 4.2.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001161 394.0
BYD3_k127_5911771_2 fatty acid desaturase K00507 - 1.14.19.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001975 374.0
BYD3_k127_5911771_3 Glyoxalase bleomycin resistance protein dioxygenase superfamily protein 19 - - - 0.0000000000000000000000000000000000000000000000007751 183.0
BYD3_k127_5911771_5 4-amino-4-deoxy-L-arabinose transferase activity K13687 - - 0.00000000000000000000000006816 124.0
BYD3_k127_5911771_6 nucleotide catabolic process K05996 - 3.4.17.18 0.000000000000000001109 90.0
BYD3_k127_5926729_0 Domains REC, sigma54 interaction, HTH8 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004124 366.0
BYD3_k127_5926729_1 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.0000000000000000000000000000000000000000000000000000000000004856 221.0
BYD3_k127_5926729_2 (Rhomboid) family K07059 - - 0.00000000000000000000000000000000000000000000000000000002894 204.0
BYD3_k127_5926729_3 beta-lactamase domain protein - - - 0.00000000000000000000000000000000000000000000000000001105 200.0
BYD3_k127_5926729_4 Belongs to the Fur family K09825 - - 0.00000000000000000000000006955 113.0
BYD3_k127_5926729_5 Tetratricopeptide repeat protein - - - 0.0000000000000000000007381 111.0
BYD3_k127_5926729_6 COG COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.000000001817 64.0
BYD3_k127_5926729_7 - - - - 0.0000002722 58.0
BYD3_k127_5926927_0 Glycosyltransferase like family 2 K11936 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003733 451.0
BYD3_k127_5926927_1 radical SAM domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002297 271.0
BYD3_k127_5926927_2 Glycosyl transferase family 21 - - - 0.0000000000000000000001781 112.0
BYD3_k127_5926927_3 PFAM Polysaccharide deacetylase K11931,K21478 - - 0.000000000000000000004147 105.0
BYD3_k127_5926927_4 Tetratricopeptide repeat - - - 0.000000000005934 79.0
BYD3_k127_5929035_0 SPTR Peptidase S8 and S53 subtilisin kexin sedolisin K01113,K14645,K17713 - 3.1.3.1 0.00000000000000000000000000000000000000000000003467 192.0
BYD3_k127_5929035_1 HDOD domain - - - 0.0000000000000000000000000001592 126.0
BYD3_k127_5929035_2 PFAM Fibronectin, type III domain K01179,K06882 - 3.2.1.4 0.000000000117 75.0
BYD3_k127_5929035_3 GGDEF domain - - - 0.0002768 48.0
BYD3_k127_5933435_0 Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin K01151 - 3.1.21.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000168 312.0
BYD3_k127_5933435_1 COG3119 Arylsulfatase A and related enzymes - - - 0.000000000000000000000000000000000000000363 171.0
BYD3_k127_5950216_0 Carbamoyl-phosphate synthase L chain, ATP binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005277 538.0
BYD3_k127_5950216_1 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 - 2.4.1.21 0.000000000000000003513 86.0
BYD3_k127_5950216_2 Belongs to the peptidase S51 family - - - 0.000000000000007534 83.0
BYD3_k127_5977922_0 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 GO:0003674,GO:0003824,GO:0003909,GO:0003911,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016874,GO:0016886,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 6.5.1.2 1.199e-207 672.0
BYD3_k127_5977922_1 membrane organization K07277 - - 0.000000000000000000000000000000000000000000008175 187.0
BYD3_k127_5977922_2 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 - 3.2.2.23,4.2.99.18 0.000000000000000000000000000000002706 133.0
BYD3_k127_5977922_3 CYTH K05873 - 4.6.1.1 0.000000000000000000000000000001858 128.0
BYD3_k127_5977922_4 - - - - 0.00002319 56.0
BYD3_k127_5990526_0 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004148 418.0
BYD3_k127_5990526_1 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.0000000000000000000000000000000002171 140.0
BYD3_k127_5990526_2 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.0000000000000000000007104 108.0
BYD3_k127_5990526_3 Protein of unknown function (DUF2905) - - - 0.00000000000000005955 82.0
BYD3_k127_5990526_4 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 GO:0000725,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008821,GO:0009058,GO:0009059,GO:0009314,GO:0009628,GO:0009987,GO:0016787,GO:0016788,GO:0016889,GO:0016894,GO:0031297,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0045005,GO:0046483,GO:0048476,GO:0050896,GO:0051716,GO:0071704,GO:0071932,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901576 3.1.22.4 0.00007494 46.0
BYD3_k127_6015512_0 homocysteine S-methyltransferase K00297,K00547 - 1.5.1.20,2.1.1.10 6.189e-201 644.0
BYD3_k127_6015512_1 Redoxin K11065 - 1.11.1.15 0.00000000000000000000000000000000000000000000000005447 184.0
BYD3_k127_6015512_2 LVIVD repeat K01179 - 3.2.1.4 0.00001266 57.0
BYD3_k127_601947_0 Polysulphide reductase K00185 - - 5.293e-205 647.0
BYD3_k127_601947_1 Molybdopterin oxidoreductase, iron-sulfur binding subunit K00184 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002062 411.0
BYD3_k127_601947_2 ABC-type Zn2 transport system, periplasmic component surface adhesin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003206 296.0
BYD3_k127_601947_3 Protein of unknown function (DUF3341) - - - 0.00000000000000000000000000000000000000000000000000000000000223 225.0
BYD3_k127_601947_4 Protein of unknown function (DUF3341) - - - 0.000000000000000000000000000000003965 139.0
BYD3_k127_6077194_0 Domain of unknown function (DUF1998) K06877 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004048 630.0
BYD3_k127_6077194_1 Exonuclease K07502 - - 0.00000000000000000000000101 121.0
BYD3_k127_6077194_2 COG0500 SAM-dependent methyltransferases - - - 0.000000000000000000000491 106.0
BYD3_k127_6079297_0 Redoxin - - - 0.0000000000000000000000000000000000000000000000004535 184.0
BYD3_k127_6079297_1 RNA polymerase sigma factor K03088 - - 0.000000000000000000000000003572 119.0
BYD3_k127_6079297_2 Endonuclease I - - - 0.000000004267 69.0
BYD3_k127_609506_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0016465,GO:0032991,GO:0044183,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051082,GO:0061077,GO:0101031,GO:1990220 - 3.974e-207 658.0
BYD3_k127_609506_1 Deoxynucleoside kinase K15518 - 2.7.1.113 0.00000000000000000000000000000000000000000000000000000000000000000000004348 249.0
BYD3_k127_609506_2 Predicted membrane protein (DUF2079) - - - 0.000000000000000000000000000000000000000000000000001446 204.0
BYD3_k127_609506_3 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) K00950 - 2.7.6.3 0.0000000000000000000000000000000000121 152.0
BYD3_k127_609506_4 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 GO:0003674,GO:0005488,GO:0005515,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008150,GO:0009987,GO:0010033,GO:0035966,GO:0042221,GO:0042802,GO:0043167,GO:0043169,GO:0046872,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0061077 - 0.00000000000000000000000000000001968 129.0
BYD3_k127_609506_5 Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin K01633 - 1.13.11.81,4.1.2.25,5.1.99.8 0.0000000000000000001984 94.0
BYD3_k127_609506_6 Cytochrome C biogenesis K02200 - - 0.0002104 51.0
BYD3_k127_6145857_0 cellulase activity - - - 0.0001034 54.0
BYD3_k127_6145857_1 exo-alpha-(2->6)-sialidase activity - - - 0.0004233 52.0
BYD3_k127_6171995_0 nuclease activity K02335 GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0003887,GO:0004518,GO:0004527,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008408,GO:0008409,GO:0009058,GO:0009059,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0018130,GO:0019438,GO:0033554,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:0090305,GO:0097159,GO:0140097,GO:1901360,GO:1901362,GO:1901363,GO:1901576 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005455 434.0
BYD3_k127_6171995_1 NHL repeat containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001013 405.0
BYD3_k127_6171995_2 Nitroreductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006685 297.0
BYD3_k127_6171995_3 Sigma-70, region 4 K03088 - - 0.000000000000000006821 92.0
BYD3_k127_6171995_4 enterobactin catabolic process K07214 - - 0.000000000000001261 91.0
BYD3_k127_6175240_0 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604,K11175 - 2.1.2.2,2.1.2.9 0.0000000000000000000000000000000000000000000004046 179.0
BYD3_k127_6175240_1 cellulose binding K00505 - 1.14.18.1 0.000000000000005944 85.0
BYD3_k127_6176427_0 DNA polymerase X family K02347 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003468 570.0
BYD3_k127_6176427_1 transporter of a GTP-driven Fe(2 ) uptake system K04759 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007084 486.0
BYD3_k127_6176427_10 N-acetylglucosaminylinositol deacetylase activity K22135 - - 0.00000000000000000000000004546 117.0
BYD3_k127_6176427_11 blue (type 1) copper - - - 0.000000003505 64.0
BYD3_k127_6176427_2 Belongs to the bacterial plant glucose-1-phosphate adenylyltransferase family K00975 - 2.7.7.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007368 415.0
BYD3_k127_6176427_3 D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1 K03841 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005984,GO:0005985,GO:0005986,GO:0005996,GO:0006000,GO:0006002,GO:0006006,GO:0006094,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009058,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019203,GO:0019318,GO:0019319,GO:0019637,GO:0030388,GO:0034637,GO:0042132,GO:0042578,GO:0044237,GO:0044238,GO:0044249,GO:0044262,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046351,GO:0046364,GO:0050308,GO:0071704,GO:1901135,GO:1901576 3.1.3.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001504 411.0
BYD3_k127_6176427_4 Evidence 5 No homology to any previously reported sequences - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007719 368.0
BYD3_k127_6176427_5 FES K10773 GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0030312,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:0140097,GO:1901360,GO:1901363 4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000007452 235.0
BYD3_k127_6176427_6 - - - - 0.0000000000000000000000000000000000000000000000000000000000008928 218.0
BYD3_k127_6176427_7 - - - - 0.0000000000000000000000000000000000000000000000000000007795 199.0
BYD3_k127_6176427_8 HAD-hyrolase-like - - - 0.000000000000000000000000000000000000009804 154.0
BYD3_k127_6176427_9 Glycosyltransferase Family 4 - - - 0.00000000000000000000000000000000001229 143.0
BYD3_k127_6188339_0 Serine threonine protein kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003458 478.0
BYD3_k127_6188339_1 4fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.00000000000000000006869 92.0
BYD3_k127_6221316_0 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903,K14067 GO:0003674,GO:0003824,GO:0004774,GO:0004775,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009060,GO:0009361,GO:0009987,GO:0015980,GO:0016874,GO:0016877,GO:0016878,GO:0016999,GO:0017144,GO:0019752,GO:0032991,GO:0042709,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045239,GO:0045333,GO:0055114,GO:0071704,GO:0072350,GO:1902494 6.2.1.5,6.2.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006651 407.0
BYD3_k127_6221316_1 Phosphomethylpyrimidine kinase K03272 - 2.7.1.167,2.7.7.70 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002624 293.0
BYD3_k127_6221316_2 Periplasmic copper-binding protein (NosD) - - - 0.000000000000000000000000000000000000000000000006616 194.0
BYD3_k127_6221316_3 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose - - - 0.0000000000000000000000000000000000000000007668 172.0
BYD3_k127_6223675_0 Bacterial Ig-like domain (group 3) - - - 0.000001176 61.0
BYD3_k127_6230020_0 Molybdopterin oxidoreductase Fe4S4 domain K00336 - 1.6.5.3 3.634e-224 708.0
BYD3_k127_6230020_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 - 1.6.5.3 2.625e-196 623.0
BYD3_k127_6230020_2 Thioredoxin-like [2Fe-2S] ferredoxin K00334 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000002524 211.0
BYD3_k127_6230020_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K13378 - 1.6.5.3 0.0000000000000000000000000000000000000000000000003007 177.0
BYD3_k127_6234277_0 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001909 492.0
BYD3_k127_6234277_1 cyclic nucleotide binding K00384,K10914,K16922 - 1.8.1.9 0.000000000000000000000000000000000000000000000007331 184.0
BYD3_k127_6234277_2 ATP:ADP antiporter activity K03301 - - 0.000000000000000000000000000000000153 143.0
BYD3_k127_6234277_3 Belongs to the UPF0312 family - - - 0.000000000000000000000000001274 122.0
BYD3_k127_6234277_4 YCII-related domain - - - 0.00000000000000000000000003656 115.0
BYD3_k127_6251889_0 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 9.263e-220 704.0
BYD3_k127_6251889_1 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 2.121e-208 672.0
BYD3_k127_6251889_10 PFAM ribosomal protein L7Ae L30e S12e Gadd45 - - - 0.0000007649 56.0
BYD3_k127_6251889_2 DHH family K06881 - 3.1.13.3,3.1.3.7 0.0000000000000000000000000000000000000000000000000000000000000003742 235.0
BYD3_k127_6251889_3 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 GO:0000049,GO:0001522,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016556,GO:0016853,GO:0016866,GO:0031119,GO:0034337,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990481 5.4.99.25 0.00000000000000000000000000000000000000000000000000000000000003142 229.0
BYD3_k127_6251889_4 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.00000000000000000000000000000000000000000000000000000000000009095 235.0
BYD3_k127_6251889_5 Methicillin resistance protein - - - 0.00000000000000000000000000000000000001347 149.0
BYD3_k127_6251889_6 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006139,GO:0006378,GO:0006396,GO:0006397,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0016043,GO:0016070,GO:0016071,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0031123,GO:0031124,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043631,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000005295 130.0
BYD3_k127_6251889_7 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.0000000000000000000003731 103.0
BYD3_k127_6251889_8 Protein of unknown function (DUF503) K09764 - - 0.000000000002035 70.0
BYD3_k127_6251889_9 nuclear chromosome segregation - - - 0.000000004162 66.0
BYD3_k127_6270118_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006929 488.0
BYD3_k127_6270118_1 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.0000000000000000000000003124 119.0
BYD3_k127_6270118_2 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.0000000000000000001237 97.0
BYD3_k127_627682_0 Peptidase family M50 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002648 375.0
BYD3_k127_627682_1 sequence-specific DNA binding K15539 - - 0.00005974 51.0
BYD3_k127_6283103_0 Glycosyl transferase 4-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003939 362.0
BYD3_k127_6283103_1 TIGRFAM FemAB-related protein, PEP-CTERM system-associated - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002076 307.0
BYD3_k127_6283103_2 transferase activity, transferring glycosyl groups - - - 0.000000000000000000000000000000000000000000000000001632 192.0
BYD3_k127_6283103_3 Bacterial transferase hexapeptide (six repeats) - - - 0.000000000000000000000000000000000000000000000001268 183.0
BYD3_k127_6283103_4 methyltransferase - - - 0.000000000000000000000000000000000000000000000009874 180.0
BYD3_k127_6283103_5 Glycosyltransferase Family 4 - - - 0.000000000000000000000002127 117.0
BYD3_k127_6283103_6 Polysaccharide biosynthesis protein - - - 0.00000000000001511 83.0
BYD3_k127_6283103_7 transferase activity, transferring glycosyl groups K13003 - - 0.000003604 59.0
BYD3_k127_6290220_0 Cytochrome c554 and c-prime - - - 1.774e-282 906.0
BYD3_k127_6290220_1 ASPIC and UnbV - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002287 572.0
BYD3_k127_6290220_2 drug transmembrane transporter activity K03327 - - 0.00000000000000000000000000000000000000000000000000000000000000000175 245.0
BYD3_k127_6290220_3 PFAM KWG Leptospira - - - 0.000000000000000000000000000000000000000000000000000000000000001175 238.0
BYD3_k127_6290220_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000007849 221.0
BYD3_k127_6290220_5 response regulator receiver K02667 - - 0.0000000000000000000000000000000000000000000000000000000005542 229.0
BYD3_k127_6290220_6 Peptidyl-prolyl cis-trans isomerase K01802,K03772 - 5.2.1.8 0.000000000000000000003513 102.0
BYD3_k127_6290220_7 Involved in initiation control of chromosome replication K07484 - - 0.000000005747 65.0
BYD3_k127_6290220_8 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.0000003192 63.0
BYD3_k127_6304514_0 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 GO:0003674,GO:0003824,GO:0004595,GO:0005488,GO:0005515,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.7.3 0.0000000000000000000000000000000000000000000000000001397 194.0
BYD3_k127_6304514_1 Methyltransferase domain - - - 0.000000000000000000000000000000000000001892 153.0
BYD3_k127_6304514_2 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 GO:0000287,GO:0003674,GO:0003824,GO:0004765,GO:0005488,GO:0006082,GO:0006520,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019438,GO:0019632,GO:0019752,GO:0032787,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046872,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615 2.7.1.71 0.00000000000000000000000009661 114.0
BYD3_k127_6304514_3 Regulatory protein, FmdB family - - - 0.00000000000000000135 91.0
BYD3_k127_6311179_0 PFAM Aminotransferase class I and II - - - 0.00000000000000000000000000000000000002318 154.0
BYD3_k127_6311179_1 Adenylylsulphate kinase - - - 0.00000000000000000000000000000004243 128.0
BYD3_k127_6341943_0 Biopterin-dependent aromatic amino acid hydroxylase K00500 - 1.14.16.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000001707 265.0
BYD3_k127_6341943_1 Transglutaminase/protease-like homologues - - - 0.00000000000000000000000000000000000000000000000000000000000000000001085 247.0
BYD3_k127_6341943_2 FtsZ-dependent cytokinesis - - - 0.000000000000000000000000000000000000000000000000000002619 207.0
BYD3_k127_6341943_3 acetyltransferases and hydrolases with the alpha beta hydrolase fold - - - 0.000000000000000000000000000000000000000002071 176.0
BYD3_k127_6341943_4 Belongs to the glycosyl hydrolase 13 family - - - 0.00001482 58.0
BYD3_k127_6377914_0 Tetratricopeptide repeat K08884,K12132 - 2.7.11.1 5.086e-201 639.0
BYD3_k127_6377914_1 ECF sigma factor - - - 0.0000000000000000000000000000000000000000000000000000000000000000006971 233.0
BYD3_k127_6396133_0 DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity K03581 - 3.1.11.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004452 554.0
BYD3_k127_6396133_1 Belongs to the thiolase family K00626 - 2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001267 417.0
BYD3_k127_6396133_2 transcription factor binding K02584,K11914 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000292 369.0
BYD3_k127_6396133_3 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.0000000000000000000000000000000000000000000000000000000000000000001592 243.0
BYD3_k127_6396133_4 S-adenosyl-l-methionine hydroxide adenosyltransferase K22205 - - 0.0000000000000000000000000000000000000000000000002754 191.0
BYD3_k127_6401008_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002856 339.0
BYD3_k127_6401008_1 transferase activity, transferring glycosyl groups K00754 - - 0.0000000000000000000000000000000000000000000000000000000000002853 234.0
BYD3_k127_6401008_2 TIGRFAM asparagine synthase (glutamine-hydrolyzing) K01953 - 6.3.5.4 0.00000000000000000000000000000000000001967 153.0
BYD3_k127_6401008_3 Polysaccharide biosynthesis protein - - - 0.0000000000000000000001109 109.0
BYD3_k127_6412974_0 ABC transporter K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001582 307.0
BYD3_k127_6412974_1 - K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002555 294.0
BYD3_k127_6412974_2 - K01992 - - 0.00000000000000000000000000000000000000000000000000000000001101 214.0
BYD3_k127_6441920_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.0 1032.0
BYD3_k127_6441920_1 Responsible for synthesis of pseudouridine from uracil K06180 GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022613,GO:0031118,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 5.4.99.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004051 278.0
BYD3_k127_6441920_10 Histidine kinase - - - 0.0000007013 62.0
BYD3_k127_6441920_2 Thymidine kinase K00857 - 2.7.1.21 0.000000000000000000000000000000000000000000000000000000000000005583 223.0
BYD3_k127_6441920_3 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.000000000000000000000000000000000000000000000001129 186.0
BYD3_k127_6441920_4 The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate K03783 - 2.4.2.1 0.000000000000000000000000000000000000000000008326 174.0
BYD3_k127_6441920_5 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 3.4.23.36 0.00000000000000000000000000000001207 133.0
BYD3_k127_6441920_6 YGGT family K02221 - - 0.000000000000000000000007059 103.0
BYD3_k127_6441920_7 Histidine kinase-like ATPase domain K04757 - 2.7.11.1 0.0000000000000000000006325 100.0
BYD3_k127_6441920_8 Belongs to the UPF0235 family K09131 - - 0.000000000001169 72.0
BYD3_k127_6441920_9 PFAM DivIVA protein K04074 - - 0.000000000006722 76.0
BYD3_k127_6445337_0 - - - - 0.00000000000000000000000000000005352 132.0
BYD3_k127_6445337_1 B12 binding domain - - - 0.00000000000000000001038 104.0
BYD3_k127_6446613_0 Bacterial protein of unknown function (DUF885) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005369 516.0
BYD3_k127_64485_0 PFAM sigma-54 factor interaction domain-containing protein K02481,K07714,K10943 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004842 312.0
BYD3_k127_64485_1 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000002725 234.0
BYD3_k127_64485_2 chitin catabolic process K01183,K03933,K13381 GO:0003674,GO:0003824,GO:0004553,GO:0004568,GO:0005575,GO:0005623,GO:0008843,GO:0016787,GO:0016798,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0044464 3.2.1.14,3.2.1.17 0.0000000000000000000000000000000000000000000008566 187.0
BYD3_k127_64485_3 Belongs to the glycosyl hydrolase 5 (cellulase A) family K01218 - 3.2.1.78 0.000000003873 70.0
BYD3_k127_64485_4 extracellular matrix structural constituent - - - 0.00000001176 68.0
BYD3_k127_6467618_0 Subtilase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000027 342.0
BYD3_k127_6467618_1 agmatine deiminase activity K10536 - 3.5.3.12 0.00000000000000000000000000000000000000000000000000000000000000000000002708 256.0
BYD3_k127_6467618_2 Belongs to the Nudix hydrolase family - - - 0.000000000000000000000003784 109.0
BYD3_k127_6467618_3 cellulase activity K01201 - 3.2.1.45 0.00000000000000000007781 106.0
BYD3_k127_6467618_4 Glycosyl transferase family 41 - - - 0.000001859 61.0
BYD3_k127_6467618_5 Putative zinc- or iron-chelating domain K06940 - - 0.0007624 50.0
BYD3_k127_6504570_0 protein conserved in bacteria K09973 - - 0.000000000000000000006051 108.0
BYD3_k127_6504570_1 Methylamine utilisation protein MauE - - - 0.00000000000000002175 96.0
BYD3_k127_6504570_2 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K07277 - - 0.0000000304 65.0
BYD3_k127_6504570_3 Rhodanese Homology Domain - - - 0.000063 54.0
BYD3_k127_6504570_4 Protein of unknown function (DUF1573) - - - 0.0001388 55.0
BYD3_k127_6509287_0 Surface antigen K07277 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000261 309.0
BYD3_k127_6509287_1 TamB, inner membrane protein subunit of TAM complex K09800 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002166 295.0
BYD3_k127_653230_0 Cytochrome bd-type quinol oxidase subunit 1 K00425 - 1.10.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006666 534.0
BYD3_k127_653230_1 Domain of unknown function (DUF4126) - - - 0.00000000000000000000000000000000000000000000000000000000000000004306 229.0
BYD3_k127_653230_2 oxidase, subunit K00426 - 1.10.3.14 0.000000000000000000000000000000000000000000000000000009831 194.0
BYD3_k127_6547173_0 Type III secretion system lipoprotein chaperone (YscW) - - - 0.0000000000000000000000000000000000000000000000000000000000000001866 235.0
BYD3_k127_6563807_0 PFAM Sporulation stage II, protein E C-terminal K07315 - 3.1.3.3 0.00003415 57.0
BYD3_k127_6563807_1 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.0002275 51.0
BYD3_k127_6567054_0 TIGRFAM DNA polymerase III, alpha subunit K02337,K14162 - 2.7.7.7 2.367e-255 806.0
BYD3_k127_6567054_1 Peptidylprolyl isomerase K01802,K03769,K03770 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000001998 265.0
BYD3_k127_6567054_2 Peptidase family M23 - - - 0.000000000000000000000000000000000000000000000004204 194.0
BYD3_k127_656714_0 tRNA synthetases class II (D, K and N) K01893 GO:0003674,GO:0003824,GO:0004812,GO:0004816,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006421,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004984 575.0
BYD3_k127_656714_1 PFAM Aminotransferase class I and II K10206 - 2.6.1.83 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004906 383.0
BYD3_k127_656714_2 methyltransferase - - - 0.00000000000000000000001937 112.0
BYD3_k127_656714_3 peptidyl-tyrosine sulfation - - - 0.0000000002441 72.0
BYD3_k127_656714_4 Glycosyl transferase family 41 - - - 0.0002631 54.0
BYD3_k127_6568374_0 Pyridoxal-dependent decarboxylase conserved domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007525 556.0
BYD3_k127_6568374_1 PFAM Dienelactone hydrolase K01061 - 3.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000003341 269.0
BYD3_k127_6568374_2 Cupin domain - - - 0.00000000000000000000000000000000000000000000000000000000000000001578 227.0
BYD3_k127_6568374_3 COG0346 Lactoylglutathione lyase and related lyases - - - 0.0000000000000000000000000000000000000000000000000000000008571 209.0
BYD3_k127_6568374_4 Protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000441 173.0
BYD3_k127_6568374_5 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000001985 127.0
BYD3_k127_6623477_0 ABC transporter transmembrane region K18890 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004515 468.0
BYD3_k127_6623477_1 PFAM ABC transporter transmembrane region K06147,K18889 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001197 418.0
BYD3_k127_6623477_10 extracellular polysaccharide biosynthetic process K07011,K16554 - - 0.000000000000000000000006615 117.0
BYD3_k127_6623477_11 protein conserved in bacteria K09931 - - 0.00000002817 55.0
BYD3_k127_6623477_2 PFAM Glycosyl transferase family 2 K00721 - 2.4.1.83 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004179 369.0
BYD3_k127_6623477_3 Bacterial sugar transferase - - - 0.000000000000000000000000000000000000000000000000000001405 205.0
BYD3_k127_6623477_4 PFAM O-antigen polymerase - - - 0.00000000000000000000000000000000001121 151.0
BYD3_k127_6623477_5 CobQ CobB MinD ParA nucleotide binding domain K16554 - - 0.00000000000000000000000000000001035 137.0
BYD3_k127_6623477_6 lysyltransferase activity K07027 - - 0.00000000000000000000000000000001571 145.0
BYD3_k127_6623477_7 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.000000000000000000000000003568 130.0
BYD3_k127_6623477_8 integral membrane protein K07027 - - 0.00000000000000000000000002516 123.0
BYD3_k127_6623477_9 Polysaccharide export protein K01991,K20988 - - 0.0000000000000000000000002228 119.0
BYD3_k127_6631458_0 PFAM fumarylacetoacetate (FAA) hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000009913 235.0
BYD3_k127_6631458_1 Carboxyl transferase domain K01966,K17489 - 2.1.3.1,2.1.3.15,6.4.1.3 0.000000000000000000000000000000000000000000000003473 176.0
BYD3_k127_6631458_2 Protein of unknown function (DUF1579) - - - 0.000000000000000000000000000000000002823 145.0
BYD3_k127_6635617_0 Protein of unknown function, DUF255 K06888 - - 5.092e-212 685.0
BYD3_k127_6635617_1 Peptidase family M28 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008305 424.0
BYD3_k127_6635617_2 PFAM peptidase M1, membrane alanine aminopeptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006459 270.0
BYD3_k127_6635617_3 Polysaccharide biosynthesis C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000001488 248.0
BYD3_k127_6635617_4 Dehydrogenase - - - 0.000000000000000000000000000000000000000000302 168.0
BYD3_k127_6635617_5 Acetyltransferase (GNAT) family K06976 - - 0.000000000000005002 86.0
BYD3_k127_6635617_6 Belongs to the peptidase S8 family - - - 0.00000007044 56.0
BYD3_k127_6650847_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.0 1320.0
BYD3_k127_6650847_1 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) K03183 - 2.1.1.163,2.1.1.201 0.00000000000000000000000000000000000000001064 163.0
BYD3_k127_6650847_2 PFAM GCN5-related N-acetyltransferase - - - 0.000000000000111 74.0
BYD3_k127_6667171_0 oligosaccharyl transferase activity - - - 0.000000000000000000000000000000000000002293 165.0
BYD3_k127_6667171_1 tetraacyldisaccharide 4'-kinase activity K00912,K09791 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 2.7.1.130 0.00000000000000000001024 93.0
BYD3_k127_6667972_0 Polysaccharide biosynthesis protein K02851 - 2.7.8.33,2.7.8.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002143 479.0
BYD3_k127_6667972_1 Thrombospondin type 3 repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000006723 260.0
BYD3_k127_6667972_2 COG1853 Conserved protein domain typically associated with - - - 0.0000000000000000000000000000000000000000000001615 175.0
BYD3_k127_6667972_3 benzoate-CoA ligase K04105 - 6.2.1.25,6.2.1.27 0.00006518 54.0
BYD3_k127_6689500_0 Uncharacterized protein conserved in bacteria (DUF2344) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001087 634.0
BYD3_k127_6689500_1 membrane transporter protein - - - 0.000000000000000000000000000000000000000000000000000002186 199.0
BYD3_k127_6689500_2 - - - - 0.00000000000000000000000000000001068 137.0
BYD3_k127_6689500_3 Redoxin - - - 0.000000000000000009021 97.0
BYD3_k127_6717632_0 COG0457 FOG TPR repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000001759 243.0
BYD3_k127_6742105_0 4Fe-4S binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001488 308.0
BYD3_k127_6742105_1 Protein kinase domain - - - 0.00000000000000000000000000000000000000000000000000000001389 216.0
BYD3_k127_674536_0 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 1.001e-222 707.0
BYD3_k127_674536_1 Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003191 503.0
BYD3_k127_674536_2 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 GO:0003674,GO:0003824,GO:0016740,GO:0016757 2.4.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002649 458.0
BYD3_k127_674536_3 Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003827 450.0
BYD3_k127_6764374_0 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001952 293.0
BYD3_k127_6764374_1 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.00000000000000000000000000000000000002827 158.0
BYD3_k127_6784321_0 Pfam:KaiC K08482 - - 1.041e-202 643.0
BYD3_k127_6784321_1 PhoQ Sensor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003069 432.0
BYD3_k127_6784321_2 KaiB K08481 - - 0.00000000000000000000000000000000000004754 147.0
BYD3_k127_6784321_3 - - - - 0.0000001463 59.0
BYD3_k127_6802475_0 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004356 369.0
BYD3_k127_6802475_1 Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides K03684 GO:0000175,GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0004532,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008408,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016796,GO:0016896,GO:0033890,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090503,GO:0140098,GO:1901360 3.1.13.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004921 284.0
BYD3_k127_6802475_2 DNA protecting protein DprA K04096 - - 0.00000000000000000000000000000000000000000000000000000008003 215.0
BYD3_k127_6802475_3 Belongs to the glycosyl hydrolase 57 family K16149 GO:0000271,GO:0003674,GO:0003824,GO:0003844,GO:0005575,GO:0005576,GO:0005975,GO:0005976,GO:0006073,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009250,GO:0009987,GO:0016051,GO:0016740,GO:0016757,GO:0016758,GO:0030978,GO:0030979,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0071704,GO:1901576 2.4.1.18 0.000000000000000000000000000000000000000000000001284 184.0
BYD3_k127_6802475_4 PFAM Bacterial lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.0000000000000000000000000000000001402 144.0
BYD3_k127_6802475_5 pfkB family carbohydrate kinase K00847,K00852,K18478 - 2.7.1.15,2.7.1.184,2.7.1.4 0.000000000000006333 89.0
BYD3_k127_6802475_6 Phosphoribulokinase / Uridine kinase family K00876 - 2.7.1.48 0.00000004046 63.0
BYD3_k127_6832880_0 DNA polymerase K02337,K14162 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001075 484.0
BYD3_k127_6832880_1 PFAM Adenosine AMP deaminase K01488 - 3.5.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001126 438.0
BYD3_k127_6832880_10 membrane protein (homolog of Drosophila rhomboid) K19225 - 3.4.21.105 0.00000000000000000000000000000001468 143.0
BYD3_k127_6832880_11 40-residue YVTN family beta-propeller repeat - - - 0.000000000000001291 90.0
BYD3_k127_6832880_12 protein secretion - - - 0.000000000001712 81.0
BYD3_k127_6832880_13 extracellular matrix structural constituent - - - 0.00000005346 60.0
BYD3_k127_6832880_14 - - - - 0.0000001407 60.0
BYD3_k127_6832880_15 phosphorelay signal transduction system - - - 0.000009661 58.0
BYD3_k127_6832880_16 PUCC protein - - - 0.0001317 54.0
BYD3_k127_6832880_2 Type II/IV secretion system protein K02669 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003653 390.0
BYD3_k127_6832880_3 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003076 264.0
BYD3_k127_6832880_4 proline dehydrogenase activity K00318 - - 0.00000000000000000000000000000000000000000000000000000000000000000000004581 254.0
BYD3_k127_6832880_5 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.000000000000000000000000000000000000000000000000000000000000000000003788 239.0
BYD3_k127_6832880_6 Domain of unknown function (DUF1848) - - - 0.000000000000000000000000000000000000000000000000000000000004804 226.0
BYD3_k127_6832880_7 Hydrolase, NUDIX family K01515 - 3.6.1.13 0.0000000000000000000000000000000000000000000001891 175.0
BYD3_k127_6832880_8 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella - - - 0.000000000000000000000000000000000000000001274 180.0
BYD3_k127_6832880_9 Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions K05524 - - 0.000000000000000000000000000000000000621 149.0
BYD3_k127_6841468_0 TIGRFAM ornithine aminotransferase K00819 - 2.6.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003975 587.0
BYD3_k127_6841468_1 Aldehyde dehydrogenase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009449 445.0
BYD3_k127_6841468_2 PFAM Aminotransferase class I and II K00812 - 2.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001287 436.0
BYD3_k127_6841468_3 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000007605 269.0
BYD3_k127_6841468_4 Bacterial transferase hexapeptide (six repeats) - - - 0.00000000000000000000000000000000000000000000000000000000009522 212.0
BYD3_k127_6841468_5 Belongs to the phosphoglycerate kinase family K00927 - 2.7.2.3 0.000000000000000000000000000000000000002075 148.0
BYD3_k127_6841468_6 Dodecin K09165 - - 0.000000000000000009071 86.0
BYD3_k127_6841468_7 Preprotein translocase SecG subunit K03075 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006616,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0022857,GO:0022884,GO:0031522,GO:0032978,GO:0032991,GO:0033036,GO:0033365,GO:0034613,GO:0042886,GO:0042887,GO:0043952,GO:0044464,GO:0045047,GO:0045184,GO:0046907,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0061024,GO:0065002,GO:0070727,GO:0070972,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0071944,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:1904680 - 0.0000000000005259 76.0
BYD3_k127_685130_0 Rhomboid family - - - 0.0000000003376 71.0
BYD3_k127_685130_1 Outer membrane assembly lipoprotein YfiO K05807 - - 0.000000005027 64.0
BYD3_k127_685130_2 ompA family - - - 0.00000003694 66.0
BYD3_k127_685130_3 long-chain fatty acid transporting porin activity - - - 0.00000009294 66.0
BYD3_k127_6858257_0 Belongs to the sigma-70 factor family K02405 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000007119 269.0
BYD3_k127_6858257_1 FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation K02410 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004209 265.0
BYD3_k127_6858257_2 The M ring may be actively involved in energy transduction K02409 - - 0.0000000000000000000000000000000000000000000000000000000000000000001746 248.0
BYD3_k127_6858257_3 PFAM MotA TolQ ExbB proton channel K02556 - - 0.00000000000000000000000000000000000000000000000000000000000000816 224.0
BYD3_k127_6858257_4 PFAM OmpA MotB domain protein K02557 - - 0.0000000000000000000000000000000001658 141.0
BYD3_k127_6858257_5 response regulator K13599 - - 0.0000000000000000000000000001503 123.0
BYD3_k127_6858257_6 Controls the rotational direction of flagella during chemotaxis K02415 - - 0.00000000000003526 79.0
BYD3_k127_6858257_7 Type III flagellar switch regulator (C-ring) FliN C-term - - - 0.000000001296 68.0
BYD3_k127_6858257_8 PFAM MgtE intracellular - - - 0.000002324 57.0
BYD3_k127_6863076_0 Peptidase family M1 domain - - - 0.00000000000000000000000000000000000000000000000000000000008083 207.0
BYD3_k127_6863076_1 Glycosyltransferase Family 4 K13668 - 2.4.1.346 0.00000000000000000000000000000000000000000000000001108 195.0
BYD3_k127_6863076_2 Mitochondrial biogenesis AIM24 - - - 0.00000000000000000000000000008888 116.0
BYD3_k127_6863076_3 Mitochondrial biogenesis AIM24 - - - 0.000000000000000003728 100.0
BYD3_k127_6863076_4 - - - - 0.00007471 53.0
BYD3_k127_6867987_0 tRNA methylthiotransferase YqeV K18707 - 2.8.4.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001203 325.0
BYD3_k127_6867987_1 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016782,GO:0034470,GO:0034641,GO:0034660,GO:0035596,GO:0035597,GO:0035600,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0050497,GO:0071704,GO:0090304,GO:1901360 2.8.4.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001237 287.0
BYD3_k127_6867987_2 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 0.0000000000000000000000000001797 123.0
BYD3_k127_6867987_3 lipopolysaccharide metabolic process K07502,K08309,K19804,K21572 - - 0.00000000000000000000000007603 122.0
BYD3_k127_6867987_4 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.000000000000004019 79.0
BYD3_k127_6896380_0 Pkd domain containing protein K01337 - 3.4.21.50 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000648 291.0
BYD3_k127_6896380_1 transferase activity, transferring glycosyl groups - - - 0.00000000000000000000000000000000000000000000000000000000000001169 233.0
BYD3_k127_6896380_2 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) K06169 - - 0.000000000000000000000000000000000000000000000000000000000006334 213.0
BYD3_k127_6896380_3 Glucose / Sorbosone dehydrogenase - - - 0.000000000000000000000000000000000000000004564 174.0
BYD3_k127_6896380_4 Belongs to the peptidase S8 family - - - 0.00000000000000000000000001477 123.0
BYD3_k127_6896380_5 belongs to the glycosyl hydrolase 13 family - - - 0.000000000000003712 88.0
BYD3_k127_6896380_6 - - - - 0.0000002875 54.0
BYD3_k127_6896380_7 Periplasmic copper-binding protein (NosD) - - - 0.000004227 56.0
BYD3_k127_6897323_0 phosphoglycerate mutase K15635 - 5.4.2.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001241 396.0
BYD3_k127_6897323_1 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 0.00000001708 61.0
BYD3_k127_6897837_0 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006415 480.0
BYD3_k127_6897837_1 KR domain K00023,K00059 - 1.1.1.100,1.1.1.36 0.000000000000000000000000000000000000000000000000000000000001321 225.0
BYD3_k127_6897837_2 TAP-like protein K01055 - 3.1.1.24 0.000000000000000000000000000000000000000000000000000212 195.0
BYD3_k127_6897837_3 Endonuclease/Exonuclease/phosphatase family - - - 0.00000000000000000000000000000000000000000002436 179.0
BYD3_k127_6897837_4 Penicillin-binding protein 5, C-terminal domain K07258 - 3.4.16.4 0.00000000000000000000000000000000000000000004265 172.0
BYD3_k127_6897837_5 Cold shock K03704 - - 0.000000000000000000000005637 104.0
BYD3_k127_6912543_0 Oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002027 576.0
BYD3_k127_6912543_1 Glycine cleavage T-protein C-terminal barrel domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005488 471.0
BYD3_k127_6912543_2 Flavin containing amine oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009667 313.0
BYD3_k127_6912543_3 NHL repeat containing protein - - - 0.0000000000000000000000000000000000000000000000000000000008212 222.0
BYD3_k127_6912543_4 Oxidoreductase - - - 0.0000000000000000000000000000000000000004673 157.0
BYD3_k127_6912543_5 Ring hydroxylating alpha subunit (catalytic domain) K00479,K00499 - 1.14.15.7 0.000000000000000000000000000000001165 135.0
BYD3_k127_6912543_6 - - - - 0.00000000000000000003008 98.0
BYD3_k127_6912543_7 Subtilase family - - - 0.0000000006195 72.0
BYD3_k127_6927079_0 transcriptional regulator K16137 - - 0.000000000000000000000000000000000001081 147.0
BYD3_k127_6927079_1 Protein of unknown function (DUF1326) - - - 0.0000000005914 71.0
BYD3_k127_6927079_2 Uncharacterized membrane protein (DUF2298) - - - 0.00002319 56.0
BYD3_k127_6960017_0 Bifunctional nuclease K08999 - - 0.00000000000000000000000000000000000002956 151.0
BYD3_k127_6960017_1 binds to the 23S rRNA K02939 - - 0.00000000000000000000000000255 120.0
BYD3_k127_6960017_2 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000001089 99.0
BYD3_k127_6960017_3 PFAM PpiC-type peptidyl-prolyl cis-trans isomerase K03770 - 5.2.1.8 0.00000000001966 77.0
BYD3_k127_6960017_4 Predicted membrane protein (DUF2232) - - - 0.00000001542 66.0
BYD3_k127_6960017_5 protein trimerization K02453 - - 0.00005097 56.0
BYD3_k127_6960017_6 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component K01999 - - 0.00006791 54.0
BYD3_k127_6985994_0 TonB-dependent Receptor Plug - - - 0.0000000000000000000000000000000000000000000003673 181.0
BYD3_k127_6985994_1 - - - - 0.0000000000000000000000003396 121.0
BYD3_k127_7002299_0 TonB-dependent receptor - - - 2.46e-250 797.0
BYD3_k127_7002299_1 cellulose binding K00505 - 1.14.18.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007802 358.0
BYD3_k127_7002299_2 Transcriptional regulator K02529 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003315 294.0
BYD3_k127_7002299_3 Glycosyltransferase 36 associated - - - 0.000000000000000000000000000000000000000000000000003232 197.0
BYD3_k127_7016843_0 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001207 364.0
BYD3_k127_7016843_1 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002263 254.0
BYD3_k127_7016843_2 NeuB family K03856,K13853 - 2.5.1.54,5.4.99.5 0.0000000000000000000000000000000000000000000000008785 179.0
BYD3_k127_7016843_3 - - - - 0.000000000000000000000000000000000000000000004745 169.0
BYD3_k127_7016843_4 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K11991 - 3.5.4.33 0.000000000000000000000000000000000003298 143.0
BYD3_k127_7016843_5 Phosphatidylglycerophosphatase A K01095 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006629,GO:0006644,GO:0006650,GO:0006655,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0008962,GO:0009058,GO:0009987,GO:0010035,GO:0010038,GO:0016020,GO:0016021,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019637,GO:0030258,GO:0031224,GO:0031226,GO:0032026,GO:0042221,GO:0042577,GO:0042578,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044425,GO:0044459,GO:0044464,GO:0045017,GO:0046471,GO:0046474,GO:0046486,GO:0046839,GO:0050896,GO:0071704,GO:0071944,GO:0090407,GO:1901576 3.1.3.27 0.000000000000000000000000000004291 126.0
BYD3_k127_7016843_6 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995,K08744 GO:0006629,GO:0006644,GO:0006650,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009987,GO:0019637,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0045017,GO:0046474,GO:0046486,GO:0071704,GO:0090407,GO:1901576 2.7.8.41,2.7.8.5 0.00000000000000000000000000003967 127.0
BYD3_k127_7016843_7 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.0000000000000000000000006018 117.0
BYD3_k127_7024687_0 - - - - 0.00000000002273 78.0
BYD3_k127_7026719_0 Ribonuclease E/G family K08300,K08301 - 3.1.26.12 0.00000000000000000000000000000000000000000000000000000000000000000000003548 263.0
BYD3_k127_7026719_1 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.000000000000000000000000000000000000000000000002637 185.0
BYD3_k127_7026719_2 Outer membrane lipoprotein K05807 - - 0.0000001733 57.0
BYD3_k127_7048167_0 Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues K01299 - 3.4.17.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008357 314.0
BYD3_k127_7048167_1 Rhomboid family - - - 0.00000000000000000000000000000000001852 142.0
BYD3_k127_7054873_0 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 - 6.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000298 419.0
BYD3_k127_7054873_1 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K05996,K07752 - 3.4.17.18,3.4.17.22 0.000000000000000000000000000000000000000002016 167.0
BYD3_k127_7054873_2 ORF located using Blastx - - - 0.00000000000000009228 80.0
BYD3_k127_7069635_0 TonB-dependent receptor - - - 0.00000000000000000000000000000000000000000000000002485 198.0
BYD3_k127_7069635_1 cellulase activity K01179,K01224,K01729 - 3.2.1.4,3.2.1.89,4.2.2.3 0.00000133 61.0
BYD3_k127_7136789_0 histidine kinase HAMP region domain protein K13598 - 2.7.13.3 0.000000000000000000000000000000000006815 156.0
BYD3_k127_7136789_1 Belongs to the sulfur carrier protein TusA family K04085 - - 0.000000000000248 75.0
BYD3_k127_7137029_0 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY K03106 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006605,GO:0006612,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0015031,GO:0015833,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0030312,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0032991,GO:0033036,GO:0034613,GO:0035639,GO:0036094,GO:0040007,GO:0042886,GO:0043167,GO:0043168,GO:0044424,GO:0044444,GO:0044464,GO:0045184,GO:0046907,GO:0048500,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0070727,GO:0071702,GO:0071705,GO:0071944,GO:0072657,GO:0090150,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1990904 3.6.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005863 467.0
BYD3_k127_7137029_1 Belongs to the RNA methyltransferase TrmD family K00554 - 2.1.1.228 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001978 280.0
BYD3_k127_7137029_10 serine threonine protein kinase K08884,K12132 GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010565,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018107,GO:0018193,GO:0018210,GO:0019216,GO:0019217,GO:0019222,GO:0019538,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0036211,GO:0042304,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0045717,GO:0045833,GO:0045922,GO:0046777,GO:0046890,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051055,GO:0062012,GO:0062014,GO:0065007,GO:0071704,GO:0071944,GO:0080090,GO:0140096,GO:1901564 2.7.11.1 0.00000000000000000000003277 109.0
BYD3_k127_7137029_11 Belongs to the bacterial ribosomal protein bS16 family K02959 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000717 97.0
BYD3_k127_7137029_12 Belongs to the UPF0102 family K07460 - - 0.00000000000000002315 86.0
BYD3_k127_7137029_2 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA K03500 - 2.1.1.176 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004426 290.0
BYD3_k127_7137029_3 PFAM Ribulose-phosphate 3-epimerase K01783 - 5.1.3.1 0.000000000000000000000000000000000000000000000000000000000000000000002372 244.0
BYD3_k127_7137029_4 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006281,GO:0006298,GO:0006401,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0032299,GO:0032991,GO:0033554,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576 3.1.26.4 0.000000000000000000000000000000000000000000000000000001168 204.0
BYD3_k127_7137029_5 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 - 2.1.2.9 0.00000000000000000000000000000000000000000000000005916 184.0
BYD3_k127_7137029_6 Magnesium chelatase, subunit ChlI C-terminal K07391 - - 0.0000000000000000000000000000000000000000127 159.0
BYD3_k127_7137029_7 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000000000000916 150.0
BYD3_k127_7137029_8 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.00000000000000000000000002524 118.0
BYD3_k127_7137029_9 Tetratricopeptide repeat - - - 0.00000000000000000000002267 111.0
BYD3_k127_7147477_0 PglZ domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000171 587.0
BYD3_k127_7147477_1 PFAM NAD-dependent epimerase dehydratase K01710,K08678 - 4.1.1.35,4.2.1.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002107 482.0
BYD3_k127_7147477_10 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 - 2.5.1.61 0.00000000000000000000000000000000000000001018 164.0
BYD3_k127_7147477_11 This enzyme acetylates the N-terminal alanine of ribosomal protein S18 K03789 - 2.3.1.128 0.0000000000000000000000000000004846 128.0
BYD3_k127_7147477_12 Histidine kinase K07636,K07768 GO:0005575,GO:0005576,GO:0005623,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009405,GO:0009987,GO:0016020,GO:0016310,GO:0018106,GO:0018193,GO:0018202,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044419,GO:0044464,GO:0046777,GO:0051704,GO:0071704,GO:0071944,GO:1901564 2.7.13.3 0.00000000000000000000000002623 122.0
BYD3_k127_7147477_13 Glycoprotease family K14742 - - 0.000000000000000000000001793 112.0
BYD3_k127_7147477_14 Threonylcarbamoyl adenosine biosynthesis protein TsaE K06925 - - 0.0000000000000000000003479 108.0
BYD3_k127_7147477_2 PFAM NAD-dependent epimerase dehydratase K01784 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000887 368.0
BYD3_k127_7147477_3 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 GO:0001676,GO:0003674,GO:0003676,GO:0003677,GO:0003723,GO:0003729,GO:0003824,GO:0003989,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006417,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008270,GO:0008610,GO:0009058,GO:0009317,GO:0009329,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0016053,GO:0016421,GO:0016874,GO:0016885,GO:0017148,GO:0019222,GO:0019752,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032787,GO:0032991,GO:0034248,GO:0034249,GO:0042759,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046872,GO:0046914,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0071704,GO:0072330,GO:0080090,GO:0097159,GO:1901363,GO:1901576,GO:1902494,GO:1990234,GO:2000112,GO:2000113 2.1.3.15,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005905 352.0
BYD3_k127_7147477_4 Integral membrane sensor signal transduction histidine kinase K07709,K13924 - 2.1.1.80,2.7.13.3,3.1.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002021 283.0
BYD3_k127_7147477_5 polysaccharide export K01991 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000009119 277.0
BYD3_k127_7147477_6 COGs COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000001024 222.0
BYD3_k127_7147477_7 The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate K00772,K03783 - 2.4.2.1,2.4.2.28 0.0000000000000000000000000000000000000000000000000000000006646 213.0
BYD3_k127_7147477_8 Glycosyl transferase family 4 K02851 - 2.7.8.33,2.7.8.35 0.000000000000000000000000000000000000000000000000001126 197.0
BYD3_k127_7147477_9 Outer membrane protein beta-barrel family K16087,K16092 - - 0.000000000000000000000000000000000000000000004513 183.0
BYD3_k127_7156865_0 Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp) K01876 - 6.1.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005955 579.0
BYD3_k127_7156865_1 Lysin motif - - - 0.000000000005022 76.0
BYD3_k127_7156865_2 histidyl-tRNA synthetase K01892 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0030312,GO:0040007,GO:0044464,GO:0071944 6.1.1.21 0.0009222 42.0
BYD3_k127_7171593_0 response regulator K13599 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006952 476.0
BYD3_k127_7171593_1 ATPase family associated with various cellular activities (AAA) K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001664 457.0
BYD3_k127_7171593_2 Polysaccharide biosynthesis protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002259 441.0
BYD3_k127_7171593_3 Protein of unknown function DUF58 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007396 375.0
BYD3_k127_7171593_4 Aerotolerance regulator N-terminal - - - 0.00000000000000000000000000000000000000000000000000003958 211.0
BYD3_k127_7171593_5 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.00000000000000000000000000000001558 140.0
BYD3_k127_7171593_6 helix_turn_helix, Arsenical Resistance Operon Repressor K22298 GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0010035,GO:0010038,GO:0010043,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0042221,GO:0044212,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1903506,GO:2000112,GO:2001141 - 0.00000000000005748 78.0
BYD3_k127_7177368_0 Peptidase family M1 domain K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006649 601.0
BYD3_k127_7177368_1 Belongs to the peptidase S8 family K01337,K01387,K05994,K08604,K14645,K20276 - 3.4.11.10,3.4.21.50,3.4.24.25,3.4.24.3 0.00001125 51.0
BYD3_k127_7190313_0 AI-2E family transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006067 347.0
BYD3_k127_7190313_1 GDSL-like Lipase/Acylhydrolase - - - 0.000000000000000000000000000000000002397 156.0
BYD3_k127_724065_0 Ser Thr phosphatase family protein K03269 - 3.6.1.54 0.000000000000000000000000000000000001762 150.0
BYD3_k127_724065_1 PFAM Uncharacterised protein family (UPF0164) - - - 0.00000000000000000000000000000004626 140.0
BYD3_k127_724065_2 Belongs to the peptidase S1C family K04771 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005575,GO:0005623,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0016787,GO:0017171,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043170,GO:0044238,GO:0044464,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.21.107 0.0000000000004144 78.0
BYD3_k127_726068_0 ImcF-related N-terminal domain K11891 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001426 385.0
BYD3_k127_726068_1 Serine threonine protein kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000199 295.0
BYD3_k127_726068_10 histone H2A K63-linked ubiquitination K16922 - - 0.000000000007478 72.0
BYD3_k127_726068_11 PFAM Forkhead-associated protein - - - 0.00000001936 67.0
BYD3_k127_726068_12 - - - - 0.0000001014 60.0
BYD3_k127_726068_13 synthase K00647 - 2.3.1.41 0.0003436 51.0
BYD3_k127_726068_14 deoxyhypusine monooxygenase activity - - - 0.0005025 51.0
BYD3_k127_726068_2 Uncharacterized protein conserved in bacteria (DUF2169) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002196 262.0
BYD3_k127_726068_3 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE K11893 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000599 267.0
BYD3_k127_726068_4 SMART protein phosphatase 2C domain protein K20074 - 3.1.3.16 0.00000000000000000000000000000000000000000000000167 183.0
BYD3_k127_726068_5 Domain of unknown function (DUF4150) - - - 0.0000000000000000000000000000000000000000001771 168.0
BYD3_k127_726068_6 Type VI secretion system protein DotU K11892 - - 0.0000000000000000000000000000001427 132.0
BYD3_k127_726068_7 Lytic transglycosylase catalytic K08307 - - 0.000000000000000000000000000087 135.0
BYD3_k127_726068_8 synthase K00647 - 2.3.1.41 0.000000000000000000001151 102.0
BYD3_k127_726068_9 Type VI secretion K11906 - - 0.00000000000002141 79.0
BYD3_k127_7263624_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003762 626.0
BYD3_k127_7263624_1 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002915 564.0
BYD3_k127_7263624_2 Protein of unknown function (DUF1549) - - - 0.000007682 55.0
BYD3_k127_7270087_0 tryptophan 2,3-dioxygenase activity K00453,K03392 GO:0003674,GO:0003824,GO:0004833,GO:0005488,GO:0006082,GO:0006520,GO:0006568,GO:0006569,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009072,GO:0009074,GO:0009308,GO:0009310,GO:0009987,GO:0016043,GO:0016054,GO:0016491,GO:0016701,GO:0016702,GO:0019439,GO:0019441,GO:0019752,GO:0020037,GO:0022607,GO:0034641,GO:0042180,GO:0042402,GO:0042430,GO:0042436,GO:0042537,GO:0043436,GO:0043933,GO:0044085,GO:0044106,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0046218,GO:0046395,GO:0046483,GO:0046700,GO:0046906,GO:0048037,GO:0051213,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0070189,GO:0071704,GO:0071840,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 1.13.11.11,4.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009868 415.0
BYD3_k127_7270087_1 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K01556 - 3.7.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008405 389.0
BYD3_k127_7270087_2 Uncharacterized conserved protein (DUF2203) - - - 0.00000000000007114 78.0
BYD3_k127_7270087_3 Protein of unknown function DUF72 - - - 0.0003718 44.0
BYD3_k127_7277268_0 Putative esterase K07214 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005117 419.0
BYD3_k127_7277268_1 Belongs to the peptidase S51 family - - - 0.000000000000000000000000000000000009912 142.0
BYD3_k127_7290720_0 radical SAM domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003162 441.0
BYD3_k127_7290720_1 water channel activity K02440,K06188,K09874 - - 0.00000000000000000000000000000000000000000000000000000000000000000002505 242.0
BYD3_k127_7290720_2 Methyltransferase domain - - - 0.000000000000000000000000000000000002631 142.0
BYD3_k127_7309163_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 1.088e-265 845.0
BYD3_k127_7309163_1 Domain of unknown function (DUF4139) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001904 392.0
BYD3_k127_7309163_2 oligosaccharyl transferase activity - - - 0.0000000000000000002519 103.0
BYD3_k127_7309163_3 Domain of unknown function (DUF4115) - - - 0.0000001681 61.0
BYD3_k127_7319341_0 Tetratricopeptide repeat K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000698 567.0
BYD3_k127_7319341_1 carbamoyl transferase, NodU family K00612 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000785 423.0
BYD3_k127_7319341_10 Male sterility protein K01784 - 5.1.3.2 0.00000000000000000000002451 114.0
BYD3_k127_7319341_11 Domain of unknown function (DUF5060) - - - 0.000001688 61.0
BYD3_k127_7319341_13 Carrier of the growing fatty acid chain in fatty acid biosynthesis K03955 GO:0000035,GO:0000036,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0005829,GO:0005975,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006643,GO:0006644,GO:0006664,GO:0006732,GO:0006790,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009106,GO:0009107,GO:0009108,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016043,GO:0016051,GO:0016053,GO:0016226,GO:0018130,GO:0019637,GO:0019752,GO:0019842,GO:0022607,GO:0031163,GO:0031177,GO:0031974,GO:0032787,GO:0033218,GO:0036094,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044272,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0044571,GO:0044620,GO:0046394,GO:0046467,GO:0046483,GO:0046493,GO:0048037,GO:0051186,GO:0051188,GO:0051192,GO:0070013,GO:0071704,GO:0071840,GO:0072330,GO:0072341,GO:0090407,GO:0140104,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901360,GO:1901362,GO:1901576,GO:1903509 - 0.00001653 53.0
BYD3_k127_7319341_14 Surface antigen - - - 0.00002595 57.0
BYD3_k127_7319341_2 slime layer polysaccharide biosynthetic process - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001617 416.0
BYD3_k127_7319341_3 Elongator protein 3, MiaB family, Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004156 366.0
BYD3_k127_7319341_4 PhoQ Sensor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004836 343.0
BYD3_k127_7319341_5 Male sterility protein K01897 - 6.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007755 312.0
BYD3_k127_7319341_6 AMP-binding enzyme K01897 - 6.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000001556 271.0
BYD3_k127_7319341_7 Male sterility protein K01897 - 6.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000005084 243.0
BYD3_k127_7319341_9 Enoyl-CoA hydratase/isomerase - - - 0.0000000000000000000000000000000003225 142.0
BYD3_k127_7330808_0 Alanine dehydrogenase/PNT, N-terminal domain K00324 - 1.6.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002671 381.0
BYD3_k127_7330808_1 Peptidase C26 K07010 - - 0.00000000000000000000000000000000000000000000000005384 186.0
BYD3_k127_7338260_0 Rieske-like [2Fe-2S] domain - - - 1.836e-196 623.0
BYD3_k127_7338260_1 Methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002452 277.0
BYD3_k127_7338260_2 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000006566 261.0
BYD3_k127_7338260_3 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000154 154.0
BYD3_k127_7338260_4 Protein of unknown function (DUF4242) - - - 0.000000000000000000000000000000000000135 143.0
BYD3_k127_7338260_5 OsmC-like protein - - - 0.000000001777 67.0
BYD3_k127_7351648_0 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus K00341 - 1.6.5.3 5.511e-234 741.0
BYD3_k127_7351648_1 Proton-conducting membrane transporter K00342 GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006091,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015672,GO:0015980,GO:0015988,GO:0015990,GO:0016020,GO:0016021,GO:0030964,GO:0031224,GO:0031226,GO:0032991,GO:0034220,GO:0044237,GO:0044425,GO:0044459,GO:0044464,GO:0045271,GO:0045272,GO:0045333,GO:0048037,GO:0048038,GO:0048039,GO:0051179,GO:0051234,GO:0055085,GO:0055114,GO:0070469,GO:0070470,GO:0071944,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098797,GO:0098803,GO:1902494,GO:1902600,GO:1990204 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004844 565.0
BYD3_k127_7351648_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008153 466.0
BYD3_k127_7351648_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016020,GO:0030964,GO:0032991,GO:0044237,GO:0044425,GO:0044459,GO:0044464,GO:0045271,GO:0045272,GO:0045333,GO:0048037,GO:0051536,GO:0051539,GO:0051540,GO:0055114,GO:0070469,GO:0070470,GO:0071944,GO:0098796,GO:0098797,GO:0098803,GO:1902494,GO:1990204 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005649 308.0
BYD3_k127_7351648_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001117 250.0
BYD3_k127_7351648_5 Belongs to the complex I subunit 6 family K00339 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0008137,GO:0008150,GO:0008152,GO:0016020,GO:0016021,GO:0016491,GO:0016651,GO:0016655,GO:0030964,GO:0031224,GO:0031226,GO:0032991,GO:0044425,GO:0044459,GO:0044464,GO:0045271,GO:0045272,GO:0050136,GO:0055114,GO:0070469,GO:0070470,GO:0071944,GO:0098796,GO:0098797,GO:0098803,GO:1902494,GO:1990204 1.6.5.3 0.00000000000000000000000000000000000000001707 166.0
BYD3_k127_7351648_6 Molybdopterin oxidoreductase Fe4S4 domain K00336 - 1.6.5.3 0.0000000000000000000000000000000000000006704 151.0
BYD3_k127_7351648_7 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0005623,GO:0005886,GO:0008137,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0016651,GO:0016655,GO:0030964,GO:0032991,GO:0044425,GO:0044459,GO:0044464,GO:0045271,GO:0045272,GO:0050136,GO:0055114,GO:0070469,GO:0070470,GO:0071944,GO:0098796,GO:0098797,GO:0098803,GO:1902494,GO:1990204 1.6.5.3 0.00000000000000000000000000000003915 135.0
BYD3_k127_7352109_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002268 528.0
BYD3_k127_7352109_1 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005972 394.0
BYD3_k127_7352109_2 nuclear chromosome segregation - - - 0.000000000000000000000000000000000000000000000000000000000000006162 246.0
BYD3_k127_7352109_3 DNA repair enzyme involved in the repair of deaminated bases. Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA K05982 - 3.1.21.7 0.0000000000000000000000000000000000000000000000000000000000005014 219.0
BYD3_k127_7352109_4 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.000000000000000000000000000000000000000000000000000749 203.0
BYD3_k127_7352109_5 Transmembrane protein 260 - - - 0.00000000000000000000000000001847 137.0
BYD3_k127_7352109_6 - - - - 0.0000000000000000000003101 98.0
BYD3_k127_7352109_7 SMART Tetratricopeptide domain protein - - - 0.00000000000003452 87.0
BYD3_k127_7352109_8 Putative 2OG-Fe(II) oxygenase - - - 0.00001249 59.0
BYD3_k127_7352109_9 Tetratricopeptide repeat - - - 0.0004531 53.0
BYD3_k127_7368735_0 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 - 4.1.99.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004824 332.0
BYD3_k127_7385322_0 Domain of Unknown Function with PDB structure (DUF3857) - - - 0.0008341 51.0
BYD3_k127_7405242_0 NAD(P)H-binding K00329,K00356 - 1.6.5.3,1.6.99.3 0.000000000000000000000000000000000007844 147.0
BYD3_k127_7405242_1 Sulfatase K01565 - 3.10.1.1 0.00000000000000000000000000000000002297 154.0
BYD3_k127_7405242_2 Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate - - - 0.0000000000000000000000000000000005792 150.0
BYD3_k127_7417486_0 O-linked GlcNAc transferase-putative TPR-containing transmembrane protein - - - 0.00000000000000000000000000000000000000000000000527 194.0
BYD3_k127_7417486_1 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03437 - - 0.000000000001504 68.0
BYD3_k127_7420443_0 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000373 233.0
BYD3_k127_7420443_1 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 0.0000000000000000000000000000000000000000000000000000009543 205.0
BYD3_k127_7420443_2 NHL repeat - - - 0.000000000000000000000000000000000000000000000000000003702 203.0
BYD3_k127_7420443_3 methyltransferase activity - - - 0.0000000000000000000000000000000005696 143.0
BYD3_k127_7420443_4 DNA polymerase alpha chain like domain - - - 0.00000000000003007 87.0
BYD3_k127_7420443_5 Fibronectin type 3 domain - - - 0.000000000001529 79.0
BYD3_k127_7430966_1 amine dehydrogenase activity - - - 0.000000000000555 79.0
BYD3_k127_7430966_2 Right handed beta helix region K01209 - 3.2.1.55 0.000000003703 63.0
BYD3_k127_7437293_0 cellulose binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000375 262.0
BYD3_k127_7437293_2 - - - - 0.00000000000002685 84.0
BYD3_k127_7437293_3 - - - - 0.00005614 55.0
BYD3_k127_7442822_0 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001034 474.0
BYD3_k127_7444737_0 AcrB/AcrD/AcrF family K15726 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001814 593.0
BYD3_k127_7444737_1 histidine kinase HAMP region domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001998 516.0
BYD3_k127_7444737_2 COG0555 ABC-type sulfate transport system, permease component K02046 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004678 353.0
BYD3_k127_7444737_3 TIGRFAM sulfate ABC transporter, permease protein CysW, sulfate ABC transporter, permease protein K02047 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005328 365.0
BYD3_k127_7444737_4 Two component transcriptional regulator, winged helix family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007849 290.0
BYD3_k127_7444737_5 Barrel-sandwich domain of CusB or HlyD membrane-fusion K15727 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000008904 276.0
BYD3_k127_7444737_6 Outer membrane efflux protein K15725 - - 0.000000000000000000000000000000000000000000000000000003491 207.0
BYD3_k127_7444737_7 TIGRFAM sulfate ABC transporter, periplasmic sulfate-binding protein K02048 - - 0.00000000000000000000000000000000000000000000002716 172.0
BYD3_k127_7458573_0 GTP-binding protein TypA K06207 - - 3.923e-277 867.0
BYD3_k127_7458573_1 PFAM FAD dependent oxidoreductase K00111 - 1.1.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001666 571.0
BYD3_k127_7458573_11 - - - - 0.000000000003232 69.0
BYD3_k127_7458573_12 Major Facilitator Superfamily - - - 0.0000000003688 72.0
BYD3_k127_7458573_13 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.000000002355 67.0
BYD3_k127_7458573_2 Glucose / Sorbosone dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001062 381.0
BYD3_k127_7458573_3 HupE / UreJ protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004209 265.0
BYD3_k127_7458573_4 B3/4 domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000006998 257.0
BYD3_k127_7458573_5 - - - - 0.000000000000000000000000000000000000000000000000000000000006946 227.0
BYD3_k127_7458573_6 Specifically methylates the N7 position of a guanine in 16S rRNA K03501 - 2.1.1.170 0.00000000000000000000000000000000000000000000000000008217 197.0
BYD3_k127_7458573_7 RNA pseudouridylate synthase K06180 - 5.4.99.23 0.0000000000000000000000000000000000000000000000000006345 193.0
BYD3_k127_7458573_8 Sulfatase - - - 0.0000000000000000000000000000000000000000000000929 192.0
BYD3_k127_7458573_9 glyoxalase III activity - - - 0.000000000000000000000000000000000000000002456 166.0
BYD3_k127_7471928_0 TatD related DNase K03424 GO:0003674,GO:0003824,GO:0004518,GO:0004536,GO:0006139,GO:0006259,GO:0006308,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0016787,GO:0016788,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901361,GO:1901575 - 0.00000000000000000000000000000000000000000000000000000000000000000001978 242.0
BYD3_k127_7471928_1 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 GO:0000154,GO:0000179,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.182 0.0000000000000000000000000000001006 130.0
BYD3_k127_7471928_2 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 GO:0003674,GO:0003824,GO:0004812,GO:0004825,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006431,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.10 0.00000000001564 65.0
BYD3_k127_7484909_0 Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling K09001 - 2.7.1.170 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002188 342.0
BYD3_k127_7484909_1 Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate K07106 - 4.2.1.126 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009737 316.0
BYD3_k127_7484909_2 Stage II sporulation protein K06381 - - 0.000000000000000000000000000000000000000000000000001684 207.0
BYD3_k127_7484909_3 Outer membrane protein beta-barrel family - - - 0.00000000000000000000000004222 112.0
BYD3_k127_7484909_5 - - - - 0.0000009796 59.0
BYD3_k127_7484909_6 Required for flagellar hook formation. May act as a scaffolding protein K02389 - - 0.000004338 58.0
BYD3_k127_7485994_0 PFAM sigma-54 factor interaction domain-containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000001949 258.0
BYD3_k127_7488677_0 NADH:flavin oxidoreductase / NADH oxidase family K09461 - 1.14.13.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001055 603.0
BYD3_k127_7488677_1 DNA-3-methyladenine glycosylase K01246 - 3.2.2.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007817 278.0
BYD3_k127_7488677_2 NlpE C-terminal OB domain - - - 0.000000000000000000000000000000000000000000000000000965 197.0
BYD3_k127_7488677_3 Membrane-bound lysozyme-inhibitor of c-type lysozyme - - - 0.000000000000000000000000000000000000002202 158.0
BYD3_k127_7488677_4 PFAM DoxX K15977 - - 0.0000000000000000000000000000000004169 136.0
BYD3_k127_7495074_0 ABC-type Mn2 Zn2 transport K11705,K11708,K19976 GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0010035,GO:0010038,GO:0010043,GO:0016020,GO:0042221,GO:0044464,GO:0050896,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004133 371.0
BYD3_k127_7495074_1 Manganese ABC transporter ATP-binding protein K02074,K09820,K11710,K19973 - 3.6.3.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002792 361.0
BYD3_k127_7495074_2 ABC transporter K11709,K19976 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002278 351.0
BYD3_k127_7495074_3 Belongs to the bacterial solute-binding protein 9 family K11707 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006836 331.0
BYD3_k127_7495074_4 Polysaccharide biosynthesis protein - - - 0.000000002094 66.0
BYD3_k127_7496525_0 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007115 319.0
BYD3_k127_7496525_1 Alpha-L-fucosidase K01206 - 3.2.1.51 0.0000000000000000000000000000000000000000000000000000000000009443 215.0
BYD3_k127_7496525_2 PFAM type I phosphodiesterase nucleotide pyrophosphatase - - - 0.000000000000000000000000002846 129.0
BYD3_k127_7517066_0 Sodium/hydrogen exchanger family K03455 - - 8.131e-227 722.0
BYD3_k127_7517066_1 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000938 203.0
BYD3_k127_7517066_2 - - - - 0.00000000000000000000000000000000003646 139.0
BYD3_k127_7517066_3 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000002365 136.0
BYD3_k127_7517066_4 30S ribosomal protein Thx K19033 - - 0.00000817 51.0
BYD3_k127_7517066_5 Uncharacterized protein conserved in bacteria (DUF2087) - - - 0.0000946 50.0
BYD3_k127_7547973_0 peptidase dimerisation domain K01436 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002452 326.0
BYD3_k127_7547973_1 6-pyruvoyl tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.00000000000000000000000000000000000000000004609 170.0
BYD3_k127_7547973_2 Glycine cleavage T-protein C-terminal barrel domain K00605,K06980 - 2.1.2.10 0.0000000000000000000000000000000000007348 152.0
BYD3_k127_7547973_3 PFAM Polysaccharide deacetylase - - - 0.0000000002203 72.0
BYD3_k127_7548559_0 Serine threonine protein kinase - - - 0.00000000000000000000000000000000000000000000003016 190.0
BYD3_k127_7548559_1 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00003493 50.0
BYD3_k127_7550624_0 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006218 552.0
BYD3_k127_7550624_1 Phosphoribosylglycinamide synthetase, C domain K01945 - 6.3.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004675 370.0
BYD3_k127_7550624_2 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.0000000000000000000000000000000000000000000004648 174.0
BYD3_k127_7550624_3 Belongs to the SUA5 family K07566 - 2.7.7.87 0.0000000000000000000000000000000004264 141.0
BYD3_k127_7550624_4 Low molecular weight phosphotyrosine protein phosphatase K01104,K20201 - 3.1.3.48,3.9.1.2 0.0000000000000000000000000004008 123.0
BYD3_k127_7550624_5 COG0791 Cell wall-associated hydrolases (invasion-associated proteins) K13694,K13695 - 3.4.17.13 0.000000000000000000000001242 113.0
BYD3_k127_7550624_6 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 0.000000000000000000000001518 105.0
BYD3_k127_7550624_7 extracellular matrix structural constituent - - - 0.00000000000000000000107 106.0
BYD3_k127_7555852_0 ApbE family K03734 - 2.7.1.180 0.0006436 46.0
BYD3_k127_7558965_0 Esterase of the alpha-beta hydrolase superfamily K07001 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005303 283.0
BYD3_k127_7558965_1 Endonuclease I - - - 0.00000000000000003207 91.0
BYD3_k127_7558965_2 Fibronectin type 3 domain - - - 0.0000004996 60.0
BYD3_k127_7558965_3 SNARE associated Golgi protein - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000001929 56.0
BYD3_k127_7570795_0 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002537 537.0
BYD3_k127_7570795_1 glycyl-tRNA synthetase alpha subunit K01878 - 6.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001215 398.0
BYD3_k127_7570795_2 PFAM type I phosphodiesterase nucleotide pyrophosphatase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000381 394.0
BYD3_k127_7570795_3 Glycosyltransferase like family 2 - - - 0.0000000000000000000000000000000000000000000000000000000001647 211.0
BYD3_k127_7570795_4 Bacterial membrane protein, YfhO - - - 0.000000000000000000000000000000000000007056 168.0
BYD3_k127_7570795_5 BNR repeat-like domain K05989 - 3.2.1.40 0.00000000000000000000002052 116.0
BYD3_k127_7570795_6 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00000000006443 76.0
BYD3_k127_7570795_7 Acetyltransferase K06975 - - 0.000000002553 64.0
BYD3_k127_7580864_0 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000005508 207.0
BYD3_k127_7608210_0 Aldehyde dehydrogenase (NAD) family protein K13922 - 1.2.1.87 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006136 463.0
BYD3_k127_7608210_1 BMC K04027 - - 0.00000000000000000000000000000002722 127.0
BYD3_k127_7608210_2 Ethanolamine utilisation protein EutN/carboxysome - - - 0.00000000000000000000004642 102.0
BYD3_k127_761075_0 - - - - 0.00000000000000000000002036 109.0
BYD3_k127_761075_1 Polysaccharide biosynthesis protein - - - 0.0000000000000000000021 109.0
BYD3_k127_761075_2 Aminoglycoside phosphotransferase - - - 0.00000000000009228 78.0
BYD3_k127_7614272_0 Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily K17828 - 1.3.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007208 322.0
BYD3_k127_7614272_1 Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD( ) K02823 - - 0.00000000000000000000000000000000000000000008305 169.0
BYD3_k127_7614272_2 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 GO:0003674,GO:0003824,GO:0004590,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006206,GO:0006207,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019856,GO:0034641,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046112,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.23 0.0000000000000000009712 99.0
BYD3_k127_7635058_0 Acyl-CoA dehydrogenase, C-terminal domain K00252 - 1.3.8.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003261 537.0
BYD3_k127_7635058_1 arginine K01478 - 3.5.3.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002649 352.0
BYD3_k127_7635058_2 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 - 2.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000006197 245.0
BYD3_k127_7635058_3 COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 K00528 - 1.18.1.2,1.19.1.1 0.000000000000000000000000000000000000000000000000000000000003013 218.0
BYD3_k127_7643758_0 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001069 362.0
BYD3_k127_7643758_1 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.000000000000000000000000000000209 138.0
BYD3_k127_7643758_2 HEAT repeat - - - 0.0000000000002295 82.0
BYD3_k127_7643780_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695,K03696 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001344 306.0
BYD3_k127_7643780_1 Putative neutral zinc metallopeptidase K06973 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002159 246.0
BYD3_k127_7643780_2 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000000007263 102.0
BYD3_k127_7643780_3 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000002712 84.0
BYD3_k127_7714021_0 Glycosyl transferases group 1 K00754 GO:0003674,GO:0003824,GO:0016740,GO:0016757 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001351 366.0
BYD3_k127_7714021_1 GlcNAc-PI de-N-acetylase K01463 - - 0.000000000000000000000000000000000000000005524 173.0
BYD3_k127_7714021_2 thiolester hydrolase activity K01179,K06889,K10773,K15853 - 3.2.1.4,4.2.99.18 0.000000000000000000000000000000682 130.0
BYD3_k127_7714021_3 Involved in bacillithiol (BSH) biosynthesis. May catalyze the last step of the pathway, the addition of cysteine to glucosamine malate (GlcN-Mal) to generate BSH K22136 - - 0.0000000000000000000000008661 115.0
BYD3_k127_7759443_0 TPM domain - - - 0.000000000000000000000000000000000009043 145.0
BYD3_k127_7759443_1 Fibronectin type III domain - - - 0.000000002842 69.0
BYD3_k127_7780804_0 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006834 516.0
BYD3_k127_7780804_1 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001689 329.0
BYD3_k127_7780804_2 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 0.000000000000000000000000000000000000000000000000000000000000000000017 256.0
BYD3_k127_7780804_3 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.00000000000000005109 89.0
BYD3_k127_7780804_4 Belongs to the bacterial ribosomal protein bL34 family K02914 - - 0.00000002709 57.0
BYD3_k127_7780804_5 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.000006553 55.0
BYD3_k127_7790907_0 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 - 2.2.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000122 285.0
BYD3_k127_7790907_1 Trypsin K04771 - 3.4.21.107 0.00000000000000000000000000000000000000000000000000000000000000000000002828 255.0
BYD3_k127_7790907_2 Adenylosuccinate lyase C-terminus K01756 GO:0003674,GO:0003824,GO:0004018,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016829,GO:0016840,GO:0016842,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046033,GO:0046390,GO:0046483,GO:0055086,GO:0070626,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.3.2.2 0.0000000000000000000000000000000000000000000000000000000000001574 226.0
BYD3_k127_7790907_3 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 GO:0000049,GO:0001522,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363 5.4.99.12 0.0000000000000001959 81.0
BYD3_k127_7807908_0 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 GO:0003674,GO:0003824,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016491,GO:0016725,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046429,GO:0046490,GO:0052592,GO:0055114,GO:0071704,GO:0090407,GO:1901135,GO:1901576 1.17.7.1,1.17.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000002544 259.0
BYD3_k127_7807908_1 Peptidase M1, membrane alanine aminopeptidase K01256 - 3.4.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000069 259.0
BYD3_k127_7807908_2 serine threonine protein kinase K12132 - 2.7.11.1 0.000001248 57.0
BYD3_k127_7811086_0 aconitate hydratase activity K01681 - 4.2.1.3 5.427e-314 984.0
BYD3_k127_7811086_1 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000002872 261.0
BYD3_k127_7811086_2 polygalacturonase activity - - - 0.000000000000000000000000000000000000000001822 175.0
BYD3_k127_7811086_3 - - - - 0.0000000000000000000000000000001557 133.0
BYD3_k127_7814835_0 PFAM Glycosyl transferase, group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001665 342.0
BYD3_k127_7814835_1 PFAM Glycosyl transferase, group 1 K12994 - 2.4.1.349 0.000000000000000000000000000000000000000000000000000000000000000000000000006035 265.0
BYD3_k127_7814835_2 Glycosyltransferase Family 4 - - - 0.00000000000000000000000000000000000000002419 167.0
BYD3_k127_7814835_3 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate K03271 - 5.3.1.28 0.0000000000000009529 77.0
BYD3_k127_7820267_0 Tetratricopeptide repeat - - - 0.00000000000000000001404 106.0
BYD3_k127_7839046_0 Transketolase, pyrimidine binding domain K11381 - 1.2.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002198 553.0
BYD3_k127_7839046_1 Peptidase family M3 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002948 517.0
BYD3_k127_7839046_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003493 473.0
BYD3_k127_7839046_3 PFAM Peptidase M29, aminopeptidase II K19689 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002806 389.0
BYD3_k127_7852847_0 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 7.653e-221 700.0
BYD3_k127_7852847_1 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 - 4.2.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001937 538.0
BYD3_k127_7852847_2 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007002 513.0
BYD3_k127_7852847_3 May be involved in recombinational repair of damaged DNA K03631 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003284 320.0
BYD3_k127_7852847_4 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766,K13497 - 2.4.2.18,4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005698 295.0
BYD3_k127_7852847_5 Peptidase C26 K01658 - 4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000006089 255.0
BYD3_k127_7852847_6 4-amino-4-deoxy-L-arabinose transferase activity K02277 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000001831 224.0
BYD3_k127_7852847_7 Belongs to the TrpC family K01609 GO:0000162,GO:0000287,GO:0003674,GO:0003824,GO:0004425,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016020,GO:0016053,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019752,GO:0030312,GO:0034641,GO:0040007,GO:0042401,GO:0042430,GO:0042435,GO:0043167,GO:0043169,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044464,GO:0046219,GO:0046391,GO:0046394,GO:0046483,GO:0046872,GO:0071704,GO:0071944,GO:1901135,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.1.1.48 0.00000000000000000000000000000000000000000000000000001475 202.0
BYD3_k127_7852847_8 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995,K08744 GO:0003674,GO:0003824,GO:0006629,GO:0006644,GO:0006650,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008444,GO:0008610,GO:0008654,GO:0009058,GO:0009987,GO:0016740,GO:0016772,GO:0016780,GO:0017169,GO:0019637,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0045017,GO:0046474,GO:0046486,GO:0071704,GO:0090407,GO:1901576 2.7.8.41,2.7.8.5 0.0000000000000007805 87.0
BYD3_k127_7857774_0 Belongs to the glycosyl hydrolase 57 family K16149 - 2.4.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003821 280.0
BYD3_k127_7857774_1 Protein of unknown function (DUF3467) - - - 0.00000000000000000000001136 104.0
BYD3_k127_787092_0 helicase K03657 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001219 582.0
BYD3_k127_787092_1 AI-2E family transporter - - - 0.000000000000000000000000000000000000000000000000000001007 207.0
BYD3_k127_787092_2 PFAM RNA recognition motif - - - 0.000000000000000000000000000000001435 132.0
BYD3_k127_787092_3 - - - - 0.000000000000867 70.0
BYD3_k127_787092_4 - - - - 0.000000000428 68.0
BYD3_k127_7872245_0 Belongs to the RtcB family K14415 - 6.5.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004269 579.0
BYD3_k127_7872245_1 TIGRFAM zinc-binding alcohol dehydrogenase family protein K13953 - 1.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004984 314.0
BYD3_k127_7872245_2 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell K03282 GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006884,GO:0008150,GO:0008361,GO:0008381,GO:0009987,GO:0009992,GO:0015267,GO:0016020,GO:0016021,GO:0016043,GO:0019725,GO:0022803,GO:0022836,GO:0022857,GO:0030104,GO:0031224,GO:0032535,GO:0042592,GO:0044425,GO:0048878,GO:0051179,GO:0051234,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0071840,GO:0090066 - 0.0000000000000000000000000000000000000000001753 164.0
BYD3_k127_7872245_3 - K07283 - - 0.00000001132 65.0
BYD3_k127_7892628_0 Enoyl-CoA hydratase/isomerase K07539 - 3.7.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004796 492.0
BYD3_k127_7892628_1 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K07538 - 1.1.1.368 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008889 381.0
BYD3_k127_7892628_2 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000007416 256.0
BYD3_k127_7892628_3 Enoyl-CoA hydratase/isomerase K07537 - 4.2.1.100 0.0000000000000000000001261 102.0
BYD3_k127_7892628_4 ATPase with chaperone activity K07391 - - 0.0000000000125 68.0
BYD3_k127_7949967_0 Protein of unknown function (DUF3108) - - - 0.0000000000000000000000000000000000000000000000000000000000002819 227.0
BYD3_k127_7949967_1 peptidyl-lysine modification to peptidyl-hypusine - - - 0.00000000000000000000000000000000000000000000000192 181.0
BYD3_k127_7949967_2 PFAM Glycosyl transferase, group 1 - - - 0.0000000000000000001358 92.0
BYD3_k127_795237_0 B12 binding domain K00548 - 2.1.1.13 1.234e-246 779.0
BYD3_k127_795237_1 Vitamin B12 dependent methionine synthase activation K00548 - 2.1.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002162 577.0
BYD3_k127_795237_2 RmuC domain protein K09760 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003373 441.0
BYD3_k127_795237_3 metallopeptidase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000006333 237.0
BYD3_k127_795237_4 - - - - 0.0000000000000000000000000000000000000000225 160.0
BYD3_k127_795237_5 PFAM membrane protein of K08972 - - 0.00000000000000000000000003569 120.0
BYD3_k127_795237_6 Tetratricopeptide repeat - - - 0.000078 52.0
BYD3_k127_795237_7 tail specific protease K08676 GO:0003674,GO:0003824,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0016787,GO:0017171,GO:0019538,GO:0043170,GO:0044238,GO:0070011,GO:0071704,GO:0140096,GO:1901564 - 0.000156 51.0
BYD3_k127_7958547_0 Acyl-CoA dehydrogenase, middle domain - - - 6.243e-199 641.0
BYD3_k127_7958547_1 LemA family K03744 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001248 248.0
BYD3_k127_7958547_2 Domain present in phytochromes and cGMP-specific phosphodiesterases. K08968 - 1.8.4.14 0.00000000000000000000000000000000000000000000000000000000001022 216.0
BYD3_k127_7958547_3 Beta-propeller domains of methanol dehydrogenase type K06872 - - 0.0000000000000000000000000000000000000000000000000333 188.0
BYD3_k127_7958547_4 amine dehydrogenase activity - - - 0.00000000000000000000000000002135 129.0
BYD3_k127_7958547_5 cellulose binding K00505 - 1.14.18.1 0.00000003619 64.0
BYD3_k127_7964389_0 SatD family (SatD) - - - 0.000000000000000000000003137 111.0
BYD3_k127_7964389_1 Protein of unknown function (DUF3307) - - - 0.00000000000000000000001689 110.0
BYD3_k127_7964389_2 Thioesterase-like superfamily K01075 - 3.1.2.23 0.00000000000002255 79.0
BYD3_k127_7964389_3 COG2931 RTX toxins and related Ca2 -binding - - - 0.0008097 47.0
BYD3_k127_7972570_0 FAD linked oxidase domain protein - - - 1.047e-196 623.0
BYD3_k127_7972570_1 FAD dependent oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002825 403.0
BYD3_k127_7972570_2 major facilitator superfamily MFS_1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006308 348.0
BYD3_k127_7972570_3 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003751 289.0
BYD3_k127_7972570_4 Belongs to the glutathione peroxidase family K00432 - 1.11.1.9 0.00000000000000000000000000000000000000000000000000000000000000000001591 235.0
BYD3_k127_7972570_5 DegT/DnrJ/EryC1/StrS aminotransferase family - - - 0.000000000000000000000000000000000000000000001837 172.0
BYD3_k127_7972570_6 Carbamoyltransferase C-terminus K00612 - - 0.00000000000000000000000000104 130.0
BYD3_k127_797651_0 - - - - 0.00000000000000000000000000000000003105 156.0
BYD3_k127_797651_1 Protein of unknown function (DUF4230) - - - 0.000000005107 66.0
BYD3_k127_797651_2 Required for flagellar hook formation. May act as a scaffolding protein K02389 - - 0.00009291 56.0
BYD3_k127_802782_0 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710 - 4.2.1.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006269 382.0
BYD3_k127_802782_1 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.00000000000000000000000000000000000000000000000456 177.0
BYD3_k127_802782_2 UDP binding domain K00012 - 1.1.1.22 0.0000000000000000000000000001125 115.0
BYD3_k127_8096825_0 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.0000000000000000000000000000000000000000000000000000000000000000913 246.0
BYD3_k127_8096825_1 Belongs to the peptidase S8 family K13276,K17734 - - 0.000000000000000000000000000000001112 141.0
BYD3_k127_8096825_2 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain - - - 0.000000000000000002008 98.0
BYD3_k127_8096825_3 Domain of unknown function (DUF5060) - - - 0.00000000000000006926 94.0
BYD3_k127_8096825_4 - - - - 0.0004867 48.0
BYD3_k127_8111836_0 Binding-protein-dependent transport system inner membrane component K02033 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001042 339.0
BYD3_k127_8111836_1 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000459 313.0
BYD3_k127_8111836_2 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001408 303.0
BYD3_k127_8111836_3 N-terminal TM domain of oligopeptide transport permease C K02034,K15582 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002688 281.0
BYD3_k127_8111836_4 Outer membrane efflux protein K12340 - - 0.000000000000000000000000000000000000001699 164.0
BYD3_k127_8111836_5 - K03641 - - 0.000000000000000000000000001759 126.0
BYD3_k127_8111836_6 Peptidase M56 - - - 0.000000000000000000009482 105.0
BYD3_k127_8111836_7 positive regulation of macromolecule biosynthetic process K03973 - - 0.00000000000000008874 93.0
BYD3_k127_8146254_0 Alanine dehydrogenase/PNT, N-terminal domain K00290,K14157 - 1.5.1.7,1.5.1.8,1.5.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007233 347.0
BYD3_k127_8146254_1 COGs COG1748 Saccharopine dehydrogenase and related protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001068 271.0
BYD3_k127_8146254_2 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.00000000000000000000000000000000000000000000000000000001987 200.0
BYD3_k127_8146254_3 Belongs to the UPF0301 (AlgH) family K07735 - - 0.0000000000000000000000000000000002065 145.0
BYD3_k127_8146254_4 efflux transmembrane transporter activity K12340,K15725 - - 0.000000002022 70.0
BYD3_k127_8166957_0 Glycosyltransferase Family 4 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005268 302.0
BYD3_k127_8166957_1 Methionine biosynthesis protein MetW - - - 0.000004927 49.0
BYD3_k127_8171775_0 Isocitrate/isopropylmalate dehydrogenase K00052 - 1.1.1.85 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008385 354.0
BYD3_k127_8171775_1 - - - - 0.000000000001924 78.0
BYD3_k127_8178304_0 Eukaryotic DNA topoisomerase I, catalytic core K03168 - 5.99.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003005 414.0
BYD3_k127_8178304_1 Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain - - - 0.00000001924 64.0
BYD3_k127_8209610_0 A G-specific K03575 - - 0.00000000000000000000000000000000000000000002715 170.0
BYD3_k127_8209610_1 Bacterial protein of unknown function (DUF937) - - - 0.000004204 52.0
BYD3_k127_8285608_0 Uncharacterized protein conserved in bacteria (DUF2169) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003966 266.0
BYD3_k127_8285608_1 lyase activity - - - 0.0000003717 61.0
BYD3_k127_8285608_2 - - - - 0.00001771 48.0
BYD3_k127_832210_0 AcrB/AcrD/AcrF family K07787 - - 0.0 1231.0
BYD3_k127_832210_1 Barrel-sandwich domain of CusB or HlyD membrane-fusion K07798 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001116 315.0
BYD3_k127_832210_2 Outer membrane efflux protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004851 262.0
BYD3_k127_832210_3 domain protein - - - 0.00000000000000000000000000000000000000000001549 173.0
BYD3_k127_832371_0 PFAM Integral membrane protein TerC K05794 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005788 328.0
BYD3_k127_832371_1 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family K03309 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001822 254.0
BYD3_k127_8324676_0 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002784 490.0
BYD3_k127_8324676_1 Enoyl- acyl-carrier-protein reductase NADH K00208 - 1.3.1.10,1.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000113 312.0
BYD3_k127_8324676_2 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001821 301.0
BYD3_k127_8324676_3 Belongs to the FPG family K10563 - 3.2.2.23,4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000000001215 259.0
BYD3_k127_8324676_4 PFAM MazG nucleotide pyrophosphohydrolase K02499,K04765 - 3.6.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000002858 247.0
BYD3_k127_8324676_5 Belongs to the ompA family K20276 - - 0.0000000000000000000000000000000000000000000003196 187.0
BYD3_k127_8324676_6 Domain of unknown function (DUF1844) - - - 0.0003254 48.0
BYD3_k127_8335721_0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain K00074 - 1.1.1.157 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005159 350.0
BYD3_k127_8335721_1 Belongs to the thiolase family K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000002781 214.0
BYD3_k127_8335721_2 Concanavalin A-like lectin/glucanases superfamily - - - 0.000000000001112 81.0
BYD3_k127_8342387_0 Glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003647 299.0
BYD3_k127_8342387_1 SNARE associated Golgi protein K03975 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000206 279.0
BYD3_k127_8342387_2 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.000000000000000000000000000000000000000000000000000000000000000000001086 243.0
BYD3_k127_8342387_3 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 GO:0003674,GO:0003824,GO:0004309,GO:0005488,GO:0005515,GO:0006139,GO:0006213,GO:0006220,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008252,GO:0008253,GO:0008254,GO:0009056,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009125,GO:0009129,GO:0009131,GO:0009158,GO:0009161,GO:0009164,GO:0009166,GO:0009173,GO:0009175,GO:0009218,GO:0009222,GO:0009259,GO:0009261,GO:0009987,GO:0016311,GO:0016462,GO:0016787,GO:0016788,GO:0016791,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0030145,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0034656,GO:0042454,GO:0042578,GO:0042802,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0046049,GO:0046050,GO:0046131,GO:0046133,GO:0046135,GO:0046434,GO:0046483,GO:0046700,GO:0046872,GO:0046914,GO:0055086,GO:0071704,GO:0072527,GO:0072529,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1901657,GO:1901658 3.1.3.5 0.00000000000000000000000000000000000000000000000000000000000000000002838 240.0
BYD3_k127_8342387_4 MerR family transcriptional regulator - - - 0.000000000000000000004196 99.0
BYD3_k127_8342387_5 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.000000000000000000009495 96.0
BYD3_k127_8342387_6 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis K00759 - 2.4.2.7 0.00000000000000003668 84.0
BYD3_k127_8362218_0 Serine threonine protein kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007669 476.0
BYD3_k127_8362218_1 HAF family - - - 0.0000000000000000000000000000000000000000000000000004023 201.0
BYD3_k127_8362218_2 - - - - 0.000000000000000000000000000000003941 133.0
BYD3_k127_8362218_3 - - - - 0.0000000000000000000000000000001527 128.0
BYD3_k127_8362218_4 - - - - 0.0000000000000000000000002145 113.0
BYD3_k127_8362218_5 Protein of unknown function DUF47 K07220 - - 0.00000000000000000000005907 106.0
BYD3_k127_8362218_6 transcriptional regulator - - - 0.00000003183 56.0
BYD3_k127_8376908_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 GO:0000988,GO:0000990,GO:0003674,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006352,GO:0006355,GO:0006725,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016070,GO:0016987,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0031323,GO:0031326,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0043254,GO:0044087,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097659,GO:0140110,GO:1901360,GO:1901362,GO:1901576,GO:1903506,GO:2000112,GO:2000142,GO:2001141 - 0.0000000000000000000000005106 117.0
BYD3_k127_8376908_1 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.00000000000001989 83.0
BYD3_k127_8381822_0 Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction K02377 - 1.1.1.271 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000336 339.0
BYD3_k127_8381822_1 Transglycosylase SLT domain K08307,K12204 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003453 339.0
BYD3_k127_8381822_2 transferase activity, transferring glycosyl groups K03208 - - 0.000000000000000000000000000000000000000000000000000000000006993 225.0
BYD3_k127_8381822_3 Glycosyltransferase, group 4 family K02851 - 2.7.8.33,2.7.8.35 0.000000000000000000000000000000000000000000000000001505 199.0
BYD3_k127_8381822_4 Tetratricopeptide repeat - - - 0.00000007769 58.0
BYD3_k127_8437617_0 Amidohydrolase family K01464 - 3.5.2.2 1.208e-195 629.0
BYD3_k127_8437617_1 4Fe-4S dicluster domain K17723 - 1.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004976 610.0
BYD3_k127_8437617_2 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00823,K07250 - 2.6.1.19,2.6.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004722 606.0
BYD3_k127_8437617_3 Aldehyde dehydrogenase family K00140 - 1.2.1.18,1.2.1.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007675 577.0
BYD3_k127_8437617_4 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster K17722 - 1.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000266 400.0
BYD3_k127_8437617_5 ASPIC and UnbV - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002912 374.0
BYD3_k127_8437617_6 PFAM Alcohol dehydrogenase GroES-like domain - - - 0.0000000000000000000000004039 110.0
BYD3_k127_8437617_7 Tetratricopeptide repeat - - - 0.0000000000000002644 93.0
BYD3_k127_8451498_0 Arginyl tRNA synthetase N terminal domain K01887 - 6.1.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005592 398.0
BYD3_k127_8451498_1 PFAM PfkB domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001139 339.0
BYD3_k127_8451498_2 AIR synthase related protein, C-terminal domain K01933 - 6.3.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007599 334.0
BYD3_k127_8451498_3 HD domain K07814 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001279 300.0
BYD3_k127_8451498_4 - - - - 0.000000000000000000000000001588 120.0
BYD3_k127_850037_0 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.00000000000000000000000000000000005314 151.0
BYD3_k127_850037_1 - - - - 0.000000005287 59.0
BYD3_k127_8512084_0 Isocitrate/isopropylmalate dehydrogenase K00030 - 1.1.1.41 0.000000000000000000000000000000000000001312 151.0
BYD3_k127_8512084_1 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 0.000000000000000000000000125 124.0
BYD3_k127_8512084_2 oligosaccharyl transferase activity - - - 0.0000000000000000000614 106.0
BYD3_k127_8512084_3 tetratricopeptide repeat - - - 0.00002478 58.0
BYD3_k127_8522566_0 Glycosyl transferase 4-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008488 312.0
BYD3_k127_8522566_1 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000001302 171.0
BYD3_k127_8522566_2 metal-dependent phosphohydrolase, HD sub domain - - - 0.0000000000000000004918 100.0
BYD3_k127_8524379_0 PFAM ABC transporter related K06020 - 3.6.3.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001363 365.0
BYD3_k127_8524379_1 peptidase activity, acting on L-amino acid peptides K01187,K01448,K07752 - 3.2.1.20,3.4.17.22,3.5.1.28 0.000000000000000000001092 109.0
BYD3_k127_8531621_0 serine threonine protein kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001851 500.0
BYD3_k127_8531621_1 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296,K18138,K18307 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000363 436.0
BYD3_k127_8531621_10 OsmC-like protein - - - 0.000000000000000000000000000000000000000000000000000000000000002235 226.0
BYD3_k127_8531621_11 glyoxalase bleomycin resistance protein dioxygenase K04750 - - 0.00000000000000000000000000000000000000000000000000000000003753 209.0
BYD3_k127_8531621_12 DsrE/DsrF/DrsH-like family - - - 0.00000000000000000000000000000000000000000000000000000000004499 214.0
BYD3_k127_8531621_13 ABC-type transport system involved in resistance to organic solvents, periplasmic component K02067 - - 0.0000000000000000000000000000000000000000007529 169.0
BYD3_k127_8531621_14 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.000000000000000000000000000000000000000001969 168.0
BYD3_k127_8531621_15 metal-dependent phosphohydrolase HD - - - 0.000000000000000000000000000000000000000006289 173.0
BYD3_k127_8531621_16 Bacterial PH domain - - - 0.00000000000000000000000000000000000000005346 155.0
BYD3_k127_8531621_17 Protein of unknown function (DUF3224) - - - 0.00000000000000000000000000000000002039 139.0
BYD3_k127_8531621_18 Belongs to the sulfur carrier protein TusA family - - - 0.000000000000000000000000002596 114.0
BYD3_k127_8531621_19 Protein of unknown function (DUF3175) - - - 0.000000000000000000000000004863 113.0
BYD3_k127_8531621_2 Rhodanese Homology Domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003763 406.0
BYD3_k127_8531621_20 PFAM Outer membrane efflux protein - - - 0.000000000000000000000006061 117.0
BYD3_k127_8531621_21 - - - - 0.000000000000000002185 92.0
BYD3_k127_8531621_22 Protein of unknown function (DUF1232) - - - 0.000000000000000005158 88.0
BYD3_k127_8531621_23 DNA-binding transcription factor activity K06075 - - 0.0000000000000005364 80.0
BYD3_k127_8531621_24 FHA domain containing protein - - - 0.00000000000002137 82.0
BYD3_k127_8531621_25 transport system auxiliary component K18480 - - 0.0000000000001848 79.0
BYD3_k127_8531621_26 - - - - 0.00000000000377 70.0
BYD3_k127_8531621_27 - - - - 0.000000000008141 72.0
BYD3_k127_8531621_28 Bacterial PH domain - - - 0.0000000000364 72.0
BYD3_k127_8531621_3 PFAM Type II secretion system protein E - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000589 393.0
BYD3_k127_8531621_4 PFAM Type II secretion system protein E K02669 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002946 384.0
BYD3_k127_8531621_5 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000108 368.0
BYD3_k127_8531621_6 Permease MlaE K02066 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004936 349.0
BYD3_k127_8531621_7 Phenazine biosynthesis-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001924 307.0
BYD3_k127_8531621_8 Abc transporter K02065 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004471 284.0
BYD3_k127_8531621_9 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K07104 - 1.13.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000001055 259.0
BYD3_k127_8534034_0 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 GO:0000166,GO:0003674,GO:0003824,GO:0004107,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009423,GO:0009987,GO:0010181,GO:0016053,GO:0016829,GO:0016835,GO:0016838,GO:0019438,GO:0019752,GO:0032553,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050662,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 4.2.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006206 373.0
BYD3_k127_8534034_1 Belongs to the peptidase M24B family K01271 - 3.4.13.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001106 280.0
BYD3_k127_8534034_2 Belongs to the TrpF family K01817 - 5.3.1.24 0.000000000000000000000000000000000000000000000006771 183.0
BYD3_k127_8534034_3 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD K01802,K03768 - 5.2.1.8 0.0000000000000000000000000000000000000000000001207 179.0
BYD3_k127_8534034_4 metal-dependent phosphohydrolase HD region - - - 0.000000000000000000000000002772 129.0
BYD3_k127_8534034_5 response regulator containing a CheY-like receiver domain and a GGDEF domain K02488 - 2.7.7.65 0.000000000000000000000235 110.0
BYD3_k127_8546735_0 ERAP1-like C-terminal domain K01256,K01263 - 3.4.11.14,3.4.11.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003204 605.0
BYD3_k127_8546735_1 SnoaL-like domain - - - 0.0000000000000000000000000000008088 127.0
BYD3_k127_8546735_2 Domain of unknown function (DUF4386) - - - 0.0000000000000000000006754 104.0
BYD3_k127_8546735_3 Domain of unknown function (DUF4386) - - - 0.000000000000001323 84.0
BYD3_k127_8546735_4 Peroxisomal biogenesis factor K12261,K13342,K20915 GO:0000038,GO:0000268,GO:0001764,GO:0002119,GO:0002164,GO:0002791,GO:0002793,GO:0003008,GO:0003674,GO:0005048,GO:0005052,GO:0005215,GO:0005216,GO:0005217,GO:0005221,GO:0005261,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005777,GO:0005778,GO:0005782,GO:0005794,GO:0005829,GO:0006082,GO:0006464,GO:0006605,GO:0006612,GO:0006625,GO:0006629,GO:0006631,GO:0006635,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006886,GO:0006887,GO:0006928,GO:0006996,GO:0007005,GO:0007006,GO:0007029,GO:0007031,GO:0007275,GO:0007399,GO:0007417,GO:0007420,GO:0008022,GO:0008104,GO:0008150,GO:0008152,GO:0008324,GO:0009056,GO:0009062,GO:0009791,GO:0009966,GO:0009987,GO:0010256,GO:0010646,GO:0010647,GO:0010817,GO:0012505,GO:0015031,GO:0015075,GO:0015267,GO:0015276,GO:0015318,GO:0015833,GO:0015919,GO:0016020,GO:0016042,GO:0016043,GO:0016054,GO:0016192,GO:0016477,GO:0016558,GO:0016560,GO:0016561,GO:0016567,GO:0017016,GO:0017038,GO:0017137,GO:0019395,GO:0019538,GO:0019752,GO:0019899,GO:0021537,GO:0021543,GO:0021795,GO:0021885,GO:0021895,GO:0021953,GO:0021987,GO:0022008,GO:0022029,GO:0022607,GO:0022803,GO:0022834,GO:0022836,GO:0022838,GO:0022839,GO:0022857,GO:0022890,GO:0023051,GO:0023056,GO:0030154,GO:0030182,GO:0030258,GO:0030425,GO:0030674,GO:0030900,GO:0031090,GO:0031267,GO:0031333,GO:0031903,GO:0031907,GO:0031974,GO:0032446,GO:0032459,GO:0032460,GO:0032462,GO:0032463,GO:0032501,GO:0032502,GO:0032787,GO:0032879,GO:0032940,GO:0032991,GO:0033036,GO:0033218,GO:0033365,GO:0034220,GO:0034440,GO:0034613,GO:0036211,GO:0036477,GO:0040008,GO:0040011,GO:0040014,GO:0040018,GO:0042221,GO:0042277,GO:0042391,GO:0042493,GO:0042579,GO:0042886,GO:0042995,GO:0043005,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043235,GO:0043254,GO:0043412,GO:0043436,GO:0043574,GO:0043855,GO:0043933,GO:0043949,GO:0044057,GO:0044060,GO:0044085,GO:0044087,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044260,GO:0044267,GO:0044281,GO:0044282,GO:0044422,GO:0044424,GO:0044438,GO:0044439,GO:0044444,GO:0044446,GO:0044463,GO:0044464,GO:0044743,GO:0045046,GO:0045055,GO:0045184,GO:0045185,GO:0045927,GO:0046395,GO:0046883,GO:0046887,GO:0046903,GO:0046907,GO:0047485,GO:0048468,GO:0048471,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048638,GO:0048639,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0048870,GO:0050789,GO:0050793,GO:0050794,GO:0050877,GO:0050896,GO:0050905,GO:0051020,GO:0051046,GO:0051047,GO:0051049,GO:0051050,GO:0051094,GO:0051128,GO:0051129,GO:0051179,GO:0051234,GO:0051235,GO:0051239,GO:0051240,GO:0051259,GO:0051262,GO:0051286,GO:0051459,GO:0051461,GO:0051641,GO:0051649,GO:0051674,GO:0055085,GO:0055114,GO:0060090,GO:0060322,GO:0061024,GO:0065002,GO:0065003,GO:0065007,GO:0065008,GO:0070013,GO:0070647,GO:0070727,GO:0071702,GO:0071704,GO:0071705,GO:0071806,GO:0071840,GO:0072329,GO:0072347,GO:0072594,GO:0072657,GO:0072662,GO:0072663,GO:0090087,GO:0090150,GO:0090276,GO:0090277,GO:0097447,GO:0097458,GO:0098588,GO:0098655,GO:0098805,GO:0099094,GO:0120025,GO:0120038,GO:1901090,GO:1901091,GO:1901093,GO:1901094,GO:1901564,GO:1901575,GO:1902531,GO:1903530,GO:1903532,GO:1990351,GO:1990415,GO:1990429 - 0.000000004323 61.0
BYD3_k127_8555896_0 ABC transporter - - - 6.001e-217 703.0
BYD3_k127_8555896_1 Lanthionine synthetase C-like protein K20484 - - 0.0000000000000000000000000000000000000000000000000000000000000000005651 244.0
BYD3_k127_8555896_2 Barrel-sandwich domain of CusB or HlyD membrane-fusion - - - 0.00000000003807 72.0
BYD3_k127_8555896_3 Methyltransferase domain - - - 0.0001273 45.0
BYD3_k127_8561043_0 Bacterial Ig-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002111 432.0
BYD3_k127_8561043_1 Protein of Unknown function (DUF2784) - - - 0.000000000000000002655 86.0
BYD3_k127_8561043_2 cellulose binding - - - 0.0000000000001393 84.0
BYD3_k127_8561043_3 - - - - 0.00003448 53.0
BYD3_k127_8567740_0 Psort location CytoplasmicMembrane, score - - - 0.0000000000000000000000000000000000000000000000000000000000000000001352 254.0
BYD3_k127_8567740_1 amine dehydrogenase activity K14274 - - 0.00006322 51.0
BYD3_k127_8568278_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.0 1064.0
BYD3_k127_8568278_1 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 3.533e-253 797.0
BYD3_k127_8568278_2 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006551 407.0
BYD3_k127_8568278_3 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001397 338.0
BYD3_k127_8568278_4 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002241 282.0
BYD3_k127_8568278_5 Modulates transcription in response to changes in cellular NADH NAD( ) redox state K01926 - - 0.0000000000000000000000000000000000000000000000000008482 191.0
BYD3_k127_8568278_6 Protein of unknown function DUF72 - - - 0.000000000000000000000000000000000000000000000000003636 204.0
BYD3_k127_8568278_7 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP K03629 - - 0.0000000000000000000000000000000000000000000000001497 192.0
BYD3_k127_8568278_8 Protein of unknown function (DUF721) - - - 0.00000001416 62.0
BYD3_k127_8568278_9 Periplasmic copper-binding protein (NosD) - - - 0.000001353 61.0
BYD3_k127_8572840_0 Belongs to the ClpA ClpB family K03696 - - 0.0 1023.0
BYD3_k127_8572840_1 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K02372,K02535,K13599,K16363 GO:0003674,GO:0003824,GO:0016829,GO:0016835,GO:0016836,GO:0019171 3.5.1.108,4.2.1.59 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002143 449.0
BYD3_k127_8572840_10 Outer membrane protein (OmpH-like) K06142 - - 0.000000000000000001915 93.0
BYD3_k127_8572840_11 UvrB/uvrC motif K19411 GO:0003674,GO:0005488,GO:0005507,GO:0006950,GO:0008150,GO:0008270,GO:0010035,GO:0010038,GO:0042221,GO:0043167,GO:0043169,GO:0046686,GO:0046688,GO:0046870,GO:0046872,GO:0046914,GO:0050896,GO:0050897,GO:0097501,GO:1990169,GO:1990170 - 0.0001843 46.0
BYD3_k127_8572840_2 Surface antigen K07277 GO:0005575,GO:0005623,GO:0008104,GO:0008150,GO:0009279,GO:0009987,GO:0016020,GO:0016043,GO:0019867,GO:0022607,GO:0030312,GO:0030313,GO:0031224,GO:0031230,GO:0031241,GO:0031246,GO:0031975,GO:0032991,GO:0033036,GO:0034613,GO:0043163,GO:0043165,GO:0044085,GO:0044091,GO:0044425,GO:0044462,GO:0044464,GO:0045184,GO:0045229,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0061024,GO:0070727,GO:0071709,GO:0071840,GO:0071944,GO:0072657,GO:0090150,GO:0098552,GO:0098796,GO:1990063 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007849 431.0
BYD3_k127_8572840_3 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 GO:0003674,GO:0005488,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008289,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0019637,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.4.1.182 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004079 280.0
BYD3_k127_8572840_4 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.000000000000000000000000000000000000000000000000000000000000000000000000000001109 284.0
BYD3_k127_8572840_5 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.0000000000000000000000000000000000000000000000000000000000000000000000000002295 275.0
BYD3_k127_8572840_6 Catalyzes the specific phosphorylation of arginine residues in a large number of proteins. Is part of the bacterial stress response system. Protein arginine phosphorylation has a physiologically important role and is involved in the regulation of many critical cellular processes, such as protein homeostasis, motility, competence, and stringent and stress responses, by regulating gene expression and protein activity K19405 GO:0006950,GO:0008150,GO:0010035,GO:0010038,GO:0042221,GO:0046686,GO:0046688,GO:0050896,GO:0097501,GO:1990169,GO:1990170 2.7.14.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000003079 269.0
BYD3_k127_8572840_7 Oxidoreductase family, NAD-binding Rossmann fold K09949 - - 0.0000000000000000000000000000000000000000000000000000000000001267 224.0
BYD3_k127_8572840_8 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) K02527 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016020,GO:0016051,GO:0016740,GO:0019637,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044464,GO:0046467,GO:0046493,GO:0071704,GO:0071944,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.00000000000000000000000000000000000001019 164.0
BYD3_k127_8572840_9 Domain of unknown function (DUF374) K02527,K09778 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.00000000000000000000000000000000001561 156.0
BYD3_k127_8578497_0 Belongs to the DegT DnrJ EryC1 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001813 413.0
BYD3_k127_8578497_1 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002088 361.0
BYD3_k127_8578497_2 PFAM sugar transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003498 295.0
BYD3_k127_8578497_3 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000002523 226.0
BYD3_k127_8578497_4 Radical SAM K22227 - - 0.00000000000000000000000000000000000000000000000000005835 203.0
BYD3_k127_8578497_5 transferase activity, transferring glycosyl groups - - - 0.00000000000000000000000000000000000000001307 171.0
BYD3_k127_8578497_6 glycosyl transferase family - - - 0.0000000000000000000000000492 123.0
BYD3_k127_8578497_7 PFAM lipopolysaccharide biosynthesis protein K08253 - 2.7.10.2 0.0000000000000000001316 98.0
BYD3_k127_8578497_8 O-Antigen ligase - - - 0.00003645 56.0
BYD3_k127_8587245_0 PFAM glycosyl transferase group 1 - - - 0.00000000000000000000000000000000000000001321 169.0
BYD3_k127_8587245_1 - - - - 0.000000000000000000000002794 109.0
BYD3_k127_8587245_2 - - - - 0.000000000000000002533 86.0
BYD3_k127_8587245_3 Parallel beta-helix repeats - - - 0.00000001145 67.0
BYD3_k127_8587245_4 TonB dependent receptor K16087 GO:0005575,GO:0005623,GO:0008150,GO:0009279,GO:0009987,GO:0010035,GO:0010038,GO:0010039,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0042221,GO:0044462,GO:0044464,GO:0050896,GO:0051716,GO:0070887,GO:0071241,GO:0071248,GO:0071281,GO:0071944 - 0.0000007491 59.0
BYD3_k127_8619532_0 glycosyl transferase family K00697 - 2.4.1.15,2.4.1.347 2.628e-249 786.0
BYD3_k127_8619532_1 PFAM Glycoside hydrolase 15-related K01178 - 3.2.1.3 1.973e-248 779.0
BYD3_k127_8640890_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004661 601.0
BYD3_k127_8640890_1 Peptidase family M23 K21471 GO:0000920,GO:0001896,GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0008219,GO:0009273,GO:0009314,GO:0009628,GO:0009987,GO:0012501,GO:0016020,GO:0016787,GO:0030288,GO:0030313,GO:0031975,GO:0032153,GO:0042221,GO:0042493,GO:0042546,GO:0042597,GO:0043085,GO:0044085,GO:0044093,GO:0044464,GO:0050790,GO:0050896,GO:0051301,GO:0051336,GO:0051345,GO:0065007,GO:0065009,GO:0071554,GO:0071840,GO:0071944 - 0.00000000000000000000000000000000000000000000000001047 203.0
BYD3_k127_8640890_2 Belongs to the ABC-4 integral membrane protein family. FtsX subfamily K09811,K09812 GO:0000910,GO:0005575,GO:0005576,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0006928,GO:0007049,GO:0007154,GO:0007165,GO:0007166,GO:0008150,GO:0008356,GO:0009274,GO:0009276,GO:0009605,GO:0009607,GO:0009615,GO:0009966,GO:0009987,GO:0010033,GO:0010646,GO:0016020,GO:0016021,GO:0016043,GO:0019221,GO:0022402,GO:0022603,GO:0022607,GO:0023051,GO:0023052,GO:0030312,GO:0030313,GO:0031224,GO:0031226,GO:0031975,GO:0032153,GO:0032506,GO:0034097,GO:0040007,GO:0040011,GO:0042173,GO:0042221,GO:0043207,GO:0043937,GO:0043938,GO:0044085,GO:0044425,GO:0044459,GO:0044464,GO:0045595,GO:0045597,GO:0045881,GO:0048518,GO:0048522,GO:0048583,GO:0048870,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051094,GO:0051179,GO:0051301,GO:0051674,GO:0051704,GO:0051707,GO:0051716,GO:0065007,GO:0070098,GO:0070297,GO:0070887,GO:0071310,GO:0071345,GO:0071840,GO:0071944,GO:0071976,GO:0090529,GO:1902531 - 0.000000000000000000000000000001221 130.0
BYD3_k127_8640890_3 TatD related DNase K03424 - - 0.0007114 47.0
BYD3_k127_8650741_0 POT family K03305 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001806 541.0
BYD3_k127_8650741_1 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004364 291.0
BYD3_k127_8650741_2 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000000000000000000000000000000000000000000000000000000006449 221.0
BYD3_k127_8650741_3 sulfurtransferase activity K00566 - 2.8.1.13 0.0000000004199 61.0
BYD3_k127_8650741_4 - - - - 0.0000004346 54.0
BYD3_k127_8650741_5 Belongs to the peptidase S8 family K01337,K01387,K05994,K08604,K14645,K20276 - 3.4.11.10,3.4.21.50,3.4.24.25,3.4.24.3 0.00005607 55.0
BYD3_k127_8659871_0 RNA polymerase recycling family C-terminal K03580 - - 0.00000000000000000000000000000000000000000000006099 188.0
BYD3_k127_8659871_1 - - - - 0.00000000000000000000000000001572 128.0
BYD3_k127_8663322_0 Belongs to the MurCDEF family K01924 - 6.3.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000458 500.0
BYD3_k127_8663322_1 electron transfer activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003038 448.0
BYD3_k127_8663322_10 Peptidoglycan polymerase that is essential for cell division K03588 - - 0.00000000000000000000000000000000000000000000006274 174.0
BYD3_k127_8663322_11 SWI complex, BAF60b domains - - - 0.00000000000000000000000000006405 125.0
BYD3_k127_8663322_12 Cell division protein FtsQ K03589 - - 0.000000008406 66.0
BYD3_k127_8663322_2 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005515,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0022607,GO:0032153,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034622,GO:0035639,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043933,GO:0044085,GO:0044424,GO:0044464,GO:0051258,GO:0051301,GO:0065003,GO:0071840,GO:0097159,GO:0097367,GO:1901265,GO:1901363 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001467 433.0
BYD3_k127_8663322_3 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001398 425.0
BYD3_k127_8663322_4 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004304 391.0
BYD3_k127_8663322_5 NfeD-like C-terminal, partner-binding K07403 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002031 370.0
BYD3_k127_8663322_6 prohibitin homologues - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004253 337.0
BYD3_k127_8663322_7 ethanolamine catabolic process - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004965 314.0
BYD3_k127_8663322_8 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.000000000000000000000000000000000000000000000000000000000001546 223.0
BYD3_k127_8663322_9 Cell wall formation K00075,K01921 GO:0000166,GO:0000270,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008360,GO:0008762,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016043,GO:0016491,GO:0016614,GO:0016616,GO:0022603,GO:0022604,GO:0030203,GO:0034645,GO:0036094,GO:0042546,GO:0043167,GO:0043168,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0045229,GO:0048037,GO:0050660,GO:0050662,GO:0050789,GO:0050793,GO:0050794,GO:0051128,GO:0055114,GO:0065007,GO:0065008,GO:0070589,GO:0071554,GO:0071555,GO:0071704,GO:0071840,GO:0097159,GO:1901135,GO:1901137,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576 1.3.1.98,6.3.2.4 0.00000000000000000000000000000000000000000000000000000000009801 215.0
BYD3_k127_866369_0 ATP dependent DNA ligase domain protein K01971 - 6.5.1.1 6.45e-261 831.0
BYD3_k127_866369_1 cellulose binding - - - 1.376e-225 703.0
BYD3_k127_866369_10 Uncharacterized conserved protein (DUF2277) - - - 0.00000000000000000000000000000000009428 135.0
BYD3_k127_866369_11 GIY-YIG catalytic domain K07461 - - 0.00000000000000000004371 95.0
BYD3_k127_866369_12 Universal stress protein - - - 0.000000000000000472 83.0
BYD3_k127_866369_13 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process K03385 - 1.7.2.2 0.00000000000001232 85.0
BYD3_k127_866369_14 alpha-L-arabinofuranosidase - - - 0.00000005392 65.0
BYD3_k127_866369_15 - - - - 0.0004065 53.0
BYD3_k127_866369_2 Alcohol dehydrogenase GroES-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000381 577.0
BYD3_k127_866369_3 C-terminal domain of 1-Cys peroxiredoxin K03386 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008725 409.0
BYD3_k127_866369_4 Protein of unknown function DUF72 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001544 281.0
BYD3_k127_866369_5 Dienelactone hydrolase family K07020 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000008563 268.0
BYD3_k127_866369_6 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001339 254.0
BYD3_k127_866369_7 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000007728 205.0
BYD3_k127_866369_8 mannose-1-phosphate guanylyltransferase activity K00971,K16011 - 2.7.7.13,5.3.1.8 0.00000000000000000000000000000000000000000000000002184 192.0
BYD3_k127_866369_9 Mo-molybdopterin cofactor metabolic process K03636,K21147 - 2.7.7.80,2.8.1.11 0.00000000000000000000000000000000000001732 154.0
BYD3_k127_8665157_0 Lantibiotic biosynthesis dehydratase C-term K20483 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001257 486.0
BYD3_k127_8667726_0 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006721,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016114,GO:0016491,GO:0016614,GO:0016616,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0030145,GO:0030604,GO:0032787,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046490,GO:0046872,GO:0046914,GO:0048037,GO:0050661,GO:0050662,GO:0051483,GO:0051484,GO:0055114,GO:0070402,GO:0071704,GO:0090407,GO:0097159,GO:1901135,GO:1901265,GO:1901363,GO:1901576 1.1.1.267 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005179 396.0
BYD3_k127_8667726_1 phosphatidate cytidylyltransferase activity K00981 - 2.7.7.41 0.00000000000000000000000000000006966 128.0
BYD3_k127_8667726_2 zinc metalloprotease K11749 - - 0.00001795 48.0
BYD3_k127_8667741_0 Proton-conducting membrane transporter K12141 GO:0005575,GO:0005623,GO:0005886,GO:0006950,GO:0006974,GO:0008150,GO:0009987,GO:0016020,GO:0016021,GO:0031224,GO:0033554,GO:0044425,GO:0044464,GO:0050896,GO:0051716,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001612 379.0
BYD3_k127_8667741_1 NADH dehydrogenase (ubiquinone) activity K14089 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002225 376.0
BYD3_k127_8667741_2 Hydrogenase 4 membrane K12140 GO:0008150,GO:0040007 - 0.0000000000000000000000000000000000000006716 161.0
BYD3_k127_8667741_3 NADH dehydrogenase K00337 - 1.6.5.3 0.000000000000000000000000000000000000001433 149.0
BYD3_k127_8669391_0 Tetratricopeptide repeat - - - 0.0000000000000000001349 101.0
BYD3_k127_8673811_0 MacB-like periplasmic core domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008571 300.0
BYD3_k127_8673811_1 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004328 264.0
BYD3_k127_8673811_2 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000007749 261.0
BYD3_k127_8679802_0 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002318 369.0
BYD3_k127_8679802_1 Bacterial sugar transferase K03606 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003776 321.0
BYD3_k127_8679802_2 UbiA prenyltransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001729 261.0
BYD3_k127_8679802_3 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237,GO:0050515 2.7.1.148 0.000000000000000000000000000000000000000000000000000001185 202.0
BYD3_k127_8679802_4 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate K03271 - 5.3.1.28 0.0000000000000000000000000000000000000000000001753 171.0
BYD3_k127_8679802_5 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000002568 146.0
BYD3_k127_8679802_6 Could be involved in septation K06412 - - 0.0000000000000000000000003237 114.0
BYD3_k127_8679802_7 Small Multidrug Resistance protein - - - 0.00000000000000002597 96.0
BYD3_k127_8683101_0 Glycosyltransferase 36 associated - - - 2.532e-292 925.0
BYD3_k127_8683101_1 COG2723 Beta-glucosidase 6-phospho-beta-glucosidase beta- galactosidase K05350 - 3.2.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000257 354.0
BYD3_k127_8704308_0 PFAM glycosyl transferase, family 35 K00688 - 2.4.1.1 4.549e-234 739.0
BYD3_k127_871218_0 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 GO:0003674,GO:0003678,GO:0003824,GO:0004003,GO:0004386,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006268,GO:0006270,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032392,GO:0032508,GO:0033554,GO:0034641,GO:0034645,GO:0042623,GO:0043138,GO:0043140,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0046483,GO:0050896,GO:0051276,GO:0051716,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:1901360,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003637 490.0
BYD3_k127_871218_1 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000966 442.0
BYD3_k127_871218_10 Binds the 23S rRNA K02909 - - 0.000000000000000000000000008795 112.0
BYD3_k127_871218_11 tetratricopeptide repeat - - - 0.000001927 60.0
BYD3_k127_871218_2 Belongs to the peptidase S8 family K13276 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001272 448.0
BYD3_k127_871218_3 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004022 406.0
BYD3_k127_871218_4 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K02887,K03628 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006353,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0018130,GO:0019438,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0042802,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097659,GO:1901360,GO:1901362,GO:1901363,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001941 341.0
BYD3_k127_871218_5 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K02887,K03628 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006353,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0018130,GO:0019438,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0042802,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097659,GO:1901360,GO:1901362,GO:1901363,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000529 319.0
BYD3_k127_871218_6 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 0.000000000000000000000000000000000000000000000000000000000000000000004438 256.0
BYD3_k127_871218_7 Belongs to the peptidase S8 family K13276 - - 0.00000000000000000000000000000000000000000000000000000000000000000002936 261.0
BYD3_k127_871218_8 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif - - - 0.0000000000000000000000000000000000000000000000000000000000000000002196 244.0
BYD3_k127_871218_9 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 - 2.1.1.297 0.000000000000000000000000000000000000000002187 169.0
BYD3_k127_8727496_0 imidazolonepropionase activity K01443 - 3.5.1.25 1.282e-220 721.0
BYD3_k127_8727496_1 Squalene/phytoene synthase K00801 - 2.5.1.21 0.000000000004425 74.0
BYD3_k127_8731747_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007146 486.0
BYD3_k127_8731747_1 Involved in the biosynthesis of porphyrin-containing compound - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003108 280.0
BYD3_k127_8731747_2 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 GO:0005575,GO:0005623,GO:0005886,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016020,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0044464,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0071944,GO:0080090,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 - 0.00000000000000000000000000000000000000000000000000000000316 212.0
BYD3_k127_8772009_0 Domains REC, sigma54 interaction, HTH8 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005952 424.0
BYD3_k127_8772009_1 Histidine kinase K03407 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000234 239.0
BYD3_k127_8772009_2 PFAM ATP-binding region, ATPase domain protein K07709 - 2.7.13.3 0.0000000000000000000000000000000000000000000000128 196.0
BYD3_k127_8772009_3 COG0840 Methyl-accepting chemotaxis protein K03406 - - 0.000000000000000000005611 108.0
BYD3_k127_8772009_4 Chemotaxis protein CheW - - - 0.0000002552 62.0
BYD3_k127_8772009_5 regulation of bacterial-type flagellum-dependent cell motility by regulation of motor speed - - - 0.00000215 58.0
BYD3_k127_8776251_0 Oxygen tolerance - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005294 391.0
BYD3_k127_8776251_1 protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008604 353.0
BYD3_k127_8776251_10 Tetratricopeptide repeat - - - 0.0000001343 63.0
BYD3_k127_8776251_2 Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S- adenosylmethionine. Has broad substrate specificity with 6- aminopurine nucleosides as preferred substrates K00772 - 2.4.2.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002005 328.0
BYD3_k127_8776251_3 Subtilase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001272 329.0
BYD3_k127_8776251_4 von Willebrand factor (vWF) type A domain K07114 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007668 299.0
BYD3_k127_8776251_5 von Willebrand factor (vWF) type A domain K07114,K12511 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001606 298.0
BYD3_k127_8776251_6 ATPase associated with various cellular K03924 - - 0.00000000000000000000000000000000000000000000004317 172.0
BYD3_k127_8776251_7 Amidohydrolase family - - - 0.0000000000000000000000001018 121.0
BYD3_k127_8776251_8 Psort location CytoplasmicMembrane, score - - - 0.000000000000000000464 98.0
BYD3_k127_8776251_9 Evidence 5 No homology to any previously reported sequences - - - 0.000000000006926 80.0
BYD3_k127_877802_0 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003465 349.0
BYD3_k127_877802_1 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007565 287.0
BYD3_k127_877802_2 Glycosyl transferase family 2 K00721,K00786 - 2.4.1.83 0.000000000000000000000000000000000000000000000000000000000000000000000008749 257.0
BYD3_k127_877802_3 Glycosyltransferase like family 2 - - - 0.0000000000000000000000000000000000004501 155.0
BYD3_k127_877802_4 Glycosyltransferase like family 2 K00721 - 2.4.1.83 0.000000000000000000000000001068 128.0
BYD3_k127_877802_5 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00000000000000000001674 107.0
BYD3_k127_877802_6 Uncharacterized conserved protein (DUF2304) K09153 - - 0.000000000000000008997 87.0
BYD3_k127_877802_7 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000000000000001414 91.0
BYD3_k127_877802_8 Glycosyl transferases group 1 K13668 - 2.4.1.346 0.000000000000006312 87.0
BYD3_k127_877802_9 COG3119 Arylsulfatase A and related enzymes - - - 0.00004319 48.0
BYD3_k127_8781007_0 denitrification pathway - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003104 254.0
BYD3_k127_8781007_1 - K20326 - - 0.0000000000000000000000000000000000000000000000000000000000000000000004918 249.0
BYD3_k127_8781007_2 Rhodanese Homology Domain K01011,K21028 - 2.8.1.1,2.8.1.11,2.8.1.2 0.0000000000000000000000000000000000000000000008889 178.0
BYD3_k127_8781648_0 DNA polymerase X K02347 - - 3.291e-241 764.0
BYD3_k127_8781648_1 pyridine nucleotide-disulphide oxidoreductase - - - 0.000000000000000000000000000000000000000000000000002067 193.0
BYD3_k127_8781648_2 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions K01507 - 3.6.1.1 0.000000000000000000000000000000000000000000000004346 176.0
BYD3_k127_8781648_3 - - - - 0.00000000000000000001459 98.0
BYD3_k127_8781648_4 - - - - 0.000000000000000001626 85.0
BYD3_k127_8781648_5 translation initiation factor activity - - - 0.000000000002365 68.0
BYD3_k127_8791308_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003908 321.0
BYD3_k127_8791308_1 Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose K01790 - 5.1.3.13 0.000000000000000000000000000000000000000000000000000000000000000008353 229.0
BYD3_k127_8791308_2 MFS_1 like family K08161 - - 0.00000000000000000000000000000000000000000000000000000000000000111 234.0
BYD3_k127_8791308_3 DNA-templated transcription, initiation K03088 - - 0.0000000000000000000000000000433 125.0
BYD3_k127_8807164_0 Belongs to the peptidase M16 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001461 321.0
BYD3_k127_8807164_1 - - - - 0.00000000000000000000000000000000000000000000000000208 196.0
BYD3_k127_8807164_2 Sulfotransferase family - - - 0.00000000000000000000000000000000008253 145.0
BYD3_k127_8807164_3 Polysaccharide biosynthesis C-terminal domain - - - 0.00000000000000000000000002431 128.0
BYD3_k127_8807164_4 Chain length determinant protein - - - 0.0000000496 64.0
BYD3_k127_8807164_5 COG3307 Lipid A core - O-antigen ligase and related enzymes - - - 0.000002368 60.0
BYD3_k127_8807164_6 PFAM Phospholipase Carboxylesterase K06999 - - 0.0001715 53.0
BYD3_k127_8817344_0 Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate K18285 - 2.5.1.120 0.0000000000000000000000000000000000000000000000000001041 193.0
BYD3_k127_8817344_1 COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and K03182 - 4.1.1.98 0.000000000000000000000000000000000003925 142.0
BYD3_k127_8834855_0 CAAX protease self-immunity K07052 - - 0.00000000000005157 83.0
BYD3_k127_8834855_1 Polyphosphate kinase 2 (PPK2) - - - 0.0000000001359 67.0
BYD3_k127_8835285_0 PFAM Glycoside hydrolase 15-related - - - 3.213e-222 733.0
BYD3_k127_8835285_1 ABC-type sugar transport system, permease component K02026 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000219 333.0
BYD3_k127_8835285_2 transmembrane transport K02025,K15771 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002297 305.0
BYD3_k127_8847221_0 WD40 domain protein beta Propeller K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000001708 272.0
BYD3_k127_8847221_1 RelA SpoT domain protein - - - 0.000000000000000000000000000000000000000000000000000000004648 213.0
BYD3_k127_8847221_2 hydroperoxide reductase activity - - - 0.0000000000000000000000003577 108.0
BYD3_k127_8847221_3 hydroperoxide reductase activity - - - 0.000000000000000002744 89.0
BYD3_k127_8854859_0 Aldehyde dehydrogenase family K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001214 507.0
BYD3_k127_8854859_1 PFAM phenylacetic acid catabolic family protein K02609 - 1.14.13.149 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005478 432.0
BYD3_k127_8854859_2 Aldehyde dehydrogenase family K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003501 370.0
BYD3_k127_8854859_3 Enoyl-CoA hydratase/isomerase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001841 278.0
BYD3_k127_8854859_4 Enoyl-CoA hydratase/isomerase K01692 - 4.2.1.17 0.0000000000000000000000000000000000000000000000000000000001418 212.0
BYD3_k127_8854859_5 PFAM phenylacetic acid catabolic family protein K02611 - 1.14.13.149 0.00000000000000000000000000000000000000000000001022 183.0
BYD3_k127_8854859_6 PFAM transferase hexapeptide repeat containing protein - - - 0.0000000000000000000000000000000000000000000001169 180.0
BYD3_k127_8854859_7 Methionine biosynthesis protein MetW - - - 0.0000000000000000000000000000000000006738 149.0
BYD3_k127_8854859_8 Pfam:DUF59 K02612 - - 0.000000000000000000000000004259 113.0
BYD3_k127_8854859_9 Iron-sulfur cluster assembly protein K02612 - - 0.000001185 54.0
BYD3_k127_8887781_0 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001821 517.0
BYD3_k127_8887781_1 Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose K01711 - 4.2.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001246 472.0
BYD3_k127_8887781_2 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001064 330.0
BYD3_k127_8887781_3 Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose K15856 - 1.1.1.281 0.00000000000000000000000000000000000000000000000000000000000000000000000000004152 269.0
BYD3_k127_8887781_4 Calcineurin-like phosphoesterase superfamily domain - - - 0.0000000000000000000000000000000000000000000000000000000007058 209.0
BYD3_k127_8887781_5 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 - 2.5.1.78 0.000000000000000000000000000000000000000000000000001475 189.0
BYD3_k127_8887781_6 Protein of unknown function (DUF2723) - - - 0.00000000000000000000000000000000000004309 154.0
BYD3_k127_8887781_7 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.0000000000000000000000000006711 124.0
BYD3_k127_8903833_0 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05540 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008461 290.0
BYD3_k127_8903833_1 Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11785 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001916 282.0
BYD3_k127_8903833_2 Belongs to the RtcB family K14415 - 6.5.1.3 0.000000000000000000000000000000000004144 138.0
BYD3_k127_8906565_0 Transglycosylase K05366 GO:0003674,GO:0005488,GO:0005515,GO:0042802 2.4.1.129,3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003563 537.0
BYD3_k127_8906565_1 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K05996,K07752 - 3.4.17.18,3.4.17.22 0.000000000000000000000000000000000000000000000000000000000000000001693 242.0
BYD3_k127_8906565_2 Belongs to the bacterial ribosomal protein bL33 family K02913 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042221,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046677,GO:0050896,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000001446 78.0
BYD3_k127_8906565_3 Belongs to the bacterial ribosomal protein bL28 family K02902 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000001016 66.0
BYD3_k127_8906565_4 Belongs to the peptidase S8 family K07093 - - 0.00000002207 66.0
BYD3_k127_8919968_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000009909 224.0
BYD3_k127_8919968_1 Evidence 5 No homology to any previously reported sequences - - - 0.0000000000000000000000000000000000000000000000003482 179.0
BYD3_k127_8919968_2 Evidence 5 No homology to any previously reported sequences - - - 0.00000000000000000000000000000000000000000000001305 178.0
BYD3_k127_8941751_0 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003898 503.0
BYD3_k127_8941751_1 - - - - 0.000000000000000000000007793 105.0
BYD3_k127_8941751_2 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.000000002296 62.0
BYD3_k127_8944462_0 TIGRFAM phosphate ABC transporter, inner membrane subunit PstA K02038 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005529 357.0
BYD3_k127_8944462_1 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001905 340.0
BYD3_k127_8944462_2 Plays a role in the regulation of phosphate uptake K02039 - - 0.00000000000000000000000000000000000000000000000000000002849 212.0
BYD3_k127_8960891_1 translation initiation factor activity K03699 - - 0.00000000000000003545 91.0
BYD3_k127_8960891_2 Calcineurin-like phosphoesterase superfamily domain - - - 0.00000000000000007054 94.0
BYD3_k127_8961372_0 oxidoreductase activity, acting on diphenols and related substances as donors K09471 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0008152,GO:0016491,GO:0044424,GO:0044464,GO:0055114 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003995 494.0
BYD3_k127_8961372_1 pyrroloquinoline quinone binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000746 326.0
BYD3_k127_8961372_2 Cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000000598 202.0
BYD3_k127_8961372_3 pyridoxamine 5-phosphate - - - 0.0000000000004052 74.0
BYD3_k127_8969231_0 SPFH Band 7 PHB domain protein K04087 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003574 275.0
BYD3_k127_8969231_1 prohibitin homologues - - - 0.00000000000000000000000000000000000000000000000000000000000005594 226.0
BYD3_k127_8969231_2 ZIP Zinc transporter K16267 - - 0.00000000000000000000000000000000000000000000000000000000004907 220.0
BYD3_k127_8969231_3 Predicted permease K07089,K17686 - 3.6.3.54 0.00000000000000000000000000000000001506 145.0
BYD3_k127_8969231_4 Parallel beta-helix repeats - - - 0.000000000000000000000003725 117.0
BYD3_k127_8969231_5 4-amino-4-deoxy-L-arabinose transferase activity K14340 - - 0.000000000000004343 88.0
BYD3_k127_8969231_6 HflC and HflK could encode or regulate a protease K04088 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006508,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0008233,GO:0009266,GO:0009408,GO:0009628,GO:0009897,GO:0009986,GO:0016020,GO:0016021,GO:0016787,GO:0019538,GO:0031224,GO:0031226,GO:0031233,GO:0032991,GO:0043086,GO:0043170,GO:0044092,GO:0044238,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0050790,GO:0050896,GO:0065007,GO:0065009,GO:0071575,GO:0071704,GO:0071944,GO:0098552,GO:0098796,GO:0140096,GO:1901564 - 0.0000001252 58.0
BYD3_k127_8977405_0 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 - 2.5.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004841 543.0
BYD3_k127_8977405_1 Nitrite and sulphite reductase 4Fe-4S K00366,K00381,K00392 - 1.7.7.1,1.8.1.2,1.8.7.1 0.00000000000000000000000000000000000000000000000000000000000000000000006675 261.0
BYD3_k127_8977405_2 Belongs to the PAPS reductase family. CysH subfamily K00390,K00860 GO:0003674,GO:0003824,GO:0004604,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0008152,GO:0016491,GO:0016667,GO:0016671,GO:0044424,GO:0044464,GO:0055114 1.8.4.10,1.8.4.8,2.7.1.25 0.0000000000000000000000000000000000000000000000000000000000000000000003086 259.0
BYD3_k127_8977405_3 Bifunctional phosphoglucose phosphomannose isomerase K15916 - 5.3.1.8,5.3.1.9 0.000000000000000000000000000000000000000000000000000004594 207.0
BYD3_k127_8977405_4 Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr) K06023 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000000000000000000000001059 175.0
BYD3_k127_8977405_5 PTS HPr component phosphorylation site K11189 - - 0.00000000000000000002575 94.0
BYD3_k127_8993648_0 Belongs to the ABC transporter superfamily K02031,K02032 - - 7.86e-236 744.0
BYD3_k127_8993648_1 COGs COG1629 Outer membrane receptor protein mostly Fe transport - - - 0.00000000000000000000000000000006946 139.0
BYD3_k127_9007591_0 PFAM blue (type 1) copper domain protein - - - 0.0000000000000000000000000000000001259 141.0
BYD3_k127_9007591_1 aminopeptidase N - - - 0.000000000000000000003137 101.0
BYD3_k127_9007591_2 Double sensory domain of two-component sensor kinase - - - 0.0001166 52.0
BYD3_k127_9014837_0 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 GO:0003674,GO:0003824,GO:0004045,GO:0016787,GO:0016788,GO:0052689,GO:0140098,GO:0140101 3.1.1.29 0.000000000000000000000000000000000000000000001451 173.0
BYD3_k127_9014837_1 single-stranded DNA binding K03111 - - 0.000000000000000000000000000000001235 136.0
BYD3_k127_9014837_2 Binds together with S18 to 16S ribosomal RNA K02990 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0019843,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070181,GO:0097159,GO:1901363,GO:1990904 - 0.000000000000000001399 92.0
BYD3_k127_9046477_0 synthetase K01907 - 6.2.1.16 1.186e-199 647.0
BYD3_k127_9046477_1 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 - 2.7.1.30 1.126e-198 636.0
BYD3_k127_9046477_2 membrane protein involved in D-alanine - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003776 295.0
BYD3_k127_9046477_3 PhoQ Sensor - - - 0.0000000000000000000000000000000001202 148.0
BYD3_k127_9046477_4 Protein of Unknown function (DUF2784) - - - 0.000000000000000000000000000003674 121.0
BYD3_k127_9046477_5 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000007718 123.0
BYD3_k127_9046477_6 - - - - 0.00000000000000000006741 102.0
BYD3_k127_9046477_7 Carrier of the growing fatty acid chain in fatty acid biosynthesis - - - 0.000000008018 62.0
BYD3_k127_9055654_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000221 498.0
BYD3_k127_9055654_1 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 - 2.5.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000002077 249.0
BYD3_k127_9055654_2 Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria K18672 GO:0003674,GO:0003824,GO:0004016,GO:0009975,GO:0016829,GO:0016849 2.7.7.85 0.0000000000000000000000000000000000000000000000000000000000000001016 231.0
BYD3_k127_9055654_3 Serine aminopeptidase, S33 K18368 GO:0000302,GO:0003674,GO:0003824,GO:0003846,GO:0004620,GO:0004622,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005794,GO:0005886,GO:0005911,GO:0006629,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0008374,GO:0009506,GO:0009636,GO:0010035,GO:0010038,GO:0010043,GO:0012505,GO:0016020,GO:0016298,GO:0016411,GO:0016740,GO:0016746,GO:0016747,GO:0016787,GO:0016788,GO:0030054,GO:0042221,GO:0042493,GO:0042542,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046677,GO:0046686,GO:0050896,GO:0052689,GO:0055044,GO:0071704,GO:0071944,GO:0090430,GO:1901700 - 0.00008252 53.0
BYD3_k127_9076564_0 glycosyl transferase group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005627 315.0
BYD3_k127_9076564_1 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides - - - 0.00000000000000000000008555 107.0
BYD3_k127_9076564_2 antisigma factor binding K04749 - - 0.00000000000000002055 86.0
BYD3_k127_9076564_3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.000000003092 66.0
BYD3_k127_919125_0 PFAM aminotransferase, class I K10907 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001141 429.0
BYD3_k127_919125_1 COG1975 Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family K07402 - - 0.00000000000000000000000000000000000000000000000006364 190.0
BYD3_k127_924747_0 Phosphotransfer between the C1 and C5 carbon atoms of pentose K01839 - 5.4.2.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002611 471.0
BYD3_k127_924747_1 The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis K00756,K00758 - 2.4.2.2,2.4.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001596 328.0
BYD3_k127_924747_2 Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate K01619 - 4.1.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000002676 261.0
BYD3_k127_924747_3 This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis K01489 - 3.5.4.5 0.00000000000000000000001692 111.0
BYD3_k127_950465_0 PFAM binding-protein-dependent transport systems inner membrane component K02033 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001552 359.0
BYD3_k127_950465_1 COG0747 ABC-type dipeptide transport system, periplasmic component K02035 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004153 330.0
BYD3_k127_950465_2 PFAM binding-protein-dependent transport systems inner membrane component K02034 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009006 322.0
BYD3_k127_950465_3 Uncharacterized ACR, COG1993 K09137 - - 0.000000000000000000000000000000000000000001451 159.0
BYD3_k127_950465_4 - - - - 0.00000000000000000000000000000000004233 136.0
BYD3_k127_950465_5 PFAM Bacterial extracellular solute-binding proteins, family 5 Middle K02035,K13893 - - 0.00000000000000000000000000000001139 134.0
BYD3_k127_950465_6 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0008150,GO:0008509,GO:0015075,GO:0015103,GO:0015318,GO:0015698,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0098656,GO:0098660,GO:0098661,GO:1903424,GO:1903425 - 0.00000000000000000005805 94.0
BYD3_k127_953460_0 Psort location Cytoplasmic, score K01867 - 6.1.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004823 379.0
BYD3_k127_953460_1 ASPIC and UnbV - - - 0.000000000000000000000000000000000000000000000004608 196.0
BYD3_k127_972236_0 PFAM LOR SDH bifunctional enzyme conserved region - - - 0.0000000000000000000000000000000000000000000000000000000000006943 216.0
BYD3_k127_972236_1 SMART AAA ATPase K02450 - - 0.0000000000000000000000000000000000000000000000000000000001274 221.0
BYD3_k127_972236_2 polysaccharide export K01991 - - 0.00000000000000000004069 102.0
BYD3_k127_972236_3 protein involved in exopolysaccharide biosynthesis K16554,K16692 - - 0.000000000000000003728 98.0
BYD3_k127_974834_0 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002482 310.0
BYD3_k127_974834_1 Insulinase (Peptidase family M16) K07263 - - 0.0000000000000000000000000000000000000000000000000000000009265 231.0