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Overview

ID MAG00157
Name BYDH1_bin.30
Sample SMP0004
Taxonomy
Kingdom Bacteria
Phylum Pseudomonadota
Class Gammaproteobacteria
Order Burkholderiales
Family Nitrosomonadaceae
Genus Nitrosomonas
Species
Assembly information
Completeness (%) 92.68
Contamination (%) 1.33
GC content (%) 45.0
N50 (bp) 19,044
Genome size (bp) 2,288,741

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes2298

Gene name Description KEGG GOs EC E-value Score Sequence
BYDH1_k127_10006019_0 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 0.0 1201.0
BYDH1_k127_10006019_1 ABC transporter K06147,K18893 - - 0.0 1172.0
BYDH1_k127_10006019_10 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002733 310.0
BYDH1_k127_10006019_11 acetyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003156 299.0
BYDH1_k127_10006019_12 Putative DNA-binding domain K09929 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000012 279.0
BYDH1_k127_10006019_13 Transcriptional regulatory protein, C terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000007877 250.0
BYDH1_k127_10006019_14 - - - - 0.00000000000000000000000000000000000000009141 154.0
BYDH1_k127_10006019_15 Universal stress protein family - - - 0.000000000000000000000000000000001345 134.0
BYDH1_k127_10006019_16 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.0000000000000002615 82.0
BYDH1_k127_10006019_2 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 2.325e-310 953.0
BYDH1_k127_10006019_3 TraB family - - - 1.655e-242 752.0
BYDH1_k127_10006019_4 Sulfate permease family - - - 5.141e-235 732.0
BYDH1_k127_10006019_5 Belongs to the FPP GGPP synthase family K00795 - 2.5.1.1,2.5.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000452 554.0
BYDH1_k127_10006019_6 Converts GTP to 7,8-dihydroneopterin triphosphate K09007 - 3.5.4.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005857 528.0
BYDH1_k127_10006019_7 Protein of unknown function (DUF692) K09930 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005563 515.0
BYDH1_k127_10006019_8 two-component system sensor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000137 475.0
BYDH1_k127_10006019_9 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006526 400.0
BYDH1_k127_10080549_0 Hydrogenase formation hypA family K04654 - - 4.924e-243 751.0
BYDH1_k127_10080549_1 AIR synthase related protein, N-terminal domain K04655 - - 8.009e-220 683.0
BYDH1_k127_10080549_2 L,D-transpeptidase catalytic domain K16291 - - 1.754e-194 609.0
BYDH1_k127_10080549_3 L,D-transpeptidase catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008281 353.0
BYDH1_k127_10080549_4 Belongs to the enoyl-CoA hydratase isomerase family K19640 - - 0.0000000000000000000000000000000000000000000000000000000000000001699 223.0
BYDH1_k127_10080549_5 Alanine-zipper, major outer membrane lipoprotein K06078 - - 0.00000000000000000000000000000000000000003851 154.0
BYDH1_k127_10080549_6 Hydrogenase assembly chaperone hypC hupF K04653 - - 0.000000000000000000000000000000002331 130.0
BYDH1_k127_10080549_7 PFAM porin, Gram-negative type - - - 0.00000000000000000000000000001431 119.0
BYDH1_k127_10210248_0 TIGRFAM TonB-dependent vitamin B12 receptor K16092 - - 0.0 1179.0
BYDH1_k127_10210248_1 phospholipase Carboxylesterase K06999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007388 420.0
BYDH1_k127_10210248_10 Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation K02232 - 6.3.5.10 0.0000000000000000000004288 96.0
BYDH1_k127_10210248_11 TIGRFAM Undecaprenyl-phosphate glucose phosphotransferase, WcaJ K03606 - - 0.000000000000000000007449 91.0
BYDH1_k127_10210248_2 Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids K19221 - 2.5.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002729 393.0
BYDH1_k127_10210248_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005202 365.0
BYDH1_k127_10210248_4 Proton-conducting membrane transporter K00342 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000007873 216.0
BYDH1_k127_10210248_5 Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate K02231 - 2.7.1.156,2.7.7.62 0.0000000000000000000000000000000000000000000000000000000016 201.0
BYDH1_k127_10210248_6 Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6- dimethylbenzimidazole (DMB) K00768 - 2.4.2.21 0.000000000000000000000000000000000255 137.0
BYDH1_k127_10210248_7 Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation K02232 - 6.3.5.10 0.0000000000000000000000000000003241 125.0
BYDH1_k127_10210248_8 Transglutaminase-like superfamily - - - 0.0000000000000000000000003394 107.0
BYDH1_k127_10210248_9 Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate K02231 - 2.7.1.156,2.7.7.62 0.00000000000000000000001711 100.0
BYDH1_k127_10232253_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 0.0 1838.0
BYDH1_k127_10232253_1 Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744 - - 0.0 1370.0
BYDH1_k127_10232253_10 - - - - 7.338e-273 841.0
BYDH1_k127_10232253_11 PFAM DNA-repair protein, UmuC-like K03502 - - 1.807e-271 837.0
BYDH1_k127_10232253_12 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 1.584e-259 801.0
BYDH1_k127_10232253_13 Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation K03771 - 5.2.1.8 2.031e-251 781.0
BYDH1_k127_10232253_14 Uncharacterized protein family (UPF0051) K09015 - - 4.441e-250 775.0
BYDH1_k127_10232253_15 Uncharacterized protein conserved in bacteria (DUF2331) - - - 1.209e-224 698.0
BYDH1_k127_10232253_16 Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) K00097 - 1.1.1.262 3.161e-203 634.0
BYDH1_k127_10232253_17 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002998 553.0
BYDH1_k127_10232253_18 HDOD domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002743 539.0
BYDH1_k127_10232253_19 ABC transporter K09013 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000297 503.0
BYDH1_k127_10232253_2 pyruvate-flavodoxin oxidoreductase activity - - - 0.0 1164.0
BYDH1_k127_10232253_20 TIGRFAM Phosphoserine phosphatase SerB K01079 - 3.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004279 481.0
BYDH1_k127_10232253_21 Domain of unknown function (DUF4126) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003775 436.0
BYDH1_k127_10232253_22 PFAM SH3, type 3 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002027 404.0
BYDH1_k127_10232253_23 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003417 371.0
BYDH1_k127_10232253_24 Scaffold protein Nfu/NifU N terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005336 364.0
BYDH1_k127_10232253_25 Transcriptional regulator K13643 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009928 310.0
BYDH1_k127_10232253_26 NifU-like N terminal domain K04488 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001113 308.0
BYDH1_k127_10232253_27 COG2346, Truncated hemoglobins K06886 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001014 269.0
BYDH1_k127_10232253_28 Universal stress protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003215 266.0
BYDH1_k127_10232253_29 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.0000000000000000000000000000000000000000000000000000000000000000000000000001581 264.0
BYDH1_k127_10232253_3 malic enzyme K00029 - 1.1.1.40 0.0 1024.0
BYDH1_k127_10232253_30 DNA polymerase III (Chi subunit) K02339 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000002806 256.0
BYDH1_k127_10232253_31 Chromate resistance - - - 0.00000000000000000000000000000000000000000000000000000000000000007993 222.0
BYDH1_k127_10232253_32 Belongs to the HesB IscA family K13628 - - 0.000000000000000000000000000000000000000000000000000000000000004412 217.0
BYDH1_k127_10232253_33 - - - - 0.000000000000000000000000000000000000000000000000005882 183.0
BYDH1_k127_10232253_34 PFAM Uncharacterised protein family UPF0150 - - - 0.00000000000000000000000000000000004707 135.0
BYDH1_k127_10232253_35 - - - - 0.0000000000000000000000000000305 121.0
BYDH1_k127_10232253_36 HicA toxin of bacterial toxin-antitoxin, - - - 0.00000000000000008308 82.0
BYDH1_k127_10232253_37 Transposase IS200 like K07491 - - 0.00000002278 55.0
BYDH1_k127_10232253_38 Transposase K07491 - - 0.00005644 45.0
BYDH1_k127_10232253_4 Uncharacterized protein family (UPF0051) K09014 - - 1.309e-311 955.0
BYDH1_k127_10232253_5 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0016787,GO:0019538,GO:0019904,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0097718,GO:0140096,GO:1901564 3.4.11.1 2.132e-307 944.0
BYDH1_k127_10232253_6 Cache domain - - - 2.065e-299 924.0
BYDH1_k127_10232253_7 TIGRFAM Diguanylate cyclase - - - 1.307e-292 901.0
BYDH1_k127_10232253_8 Chromate transporter K07240 - - 4.435e-287 883.0
BYDH1_k127_10232253_9 Aldehyde dehydrogenase K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 7.135e-284 874.0
BYDH1_k127_10245174_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001796 458.0
BYDH1_k127_10245174_1 Adenosine-5'-phosphosulfate reductase beta subunit K00395 - 1.8.99.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001909 342.0
BYDH1_k127_10245174_2 PUA-like domain K00958 - 2.7.7.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006919 315.0
BYDH1_k127_1026685_0 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 1.274e-311 956.0
BYDH1_k127_1026685_1 PFAM Peptidase S13, D-Ala-D-Ala carboxypeptidase C K07259 - 3.4.16.4 3.022e-266 821.0
BYDH1_k127_1026685_2 Phosphomethylpyrimidine kinase K00941 - 2.7.1.49,2.7.4.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008187 537.0
BYDH1_k127_1026685_3 HAD-superfamily hydrolase, subfamily IA, variant 3 K01091 - 3.1.3.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001836 488.0
BYDH1_k127_1026685_4 Tetrapyrrole (Corrin/Porphyrin) Methylases K07056 - 2.1.1.198 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001243 454.0
BYDH1_k127_1026685_5 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003219 449.0
BYDH1_k127_1026685_6 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004264 382.0
BYDH1_k127_1026685_7 Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione K01759 - 4.4.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000002599 261.0
BYDH1_k127_1026685_8 ApaG domain K06195 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002847 259.0
BYDH1_k127_1026685_9 PFAM Rubredoxin-type Fe(Cys)4 protein - - - 0.00000000000000000000000000000000000003054 143.0
BYDH1_k127_1038641_0 RNA polymerase recycling family C-terminal K03580 - - 0.0 1702.0
BYDH1_k127_1038641_1 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 - - 0.0 1633.0
BYDH1_k127_1038641_10 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002649 505.0
BYDH1_k127_1038641_11 Belongs to the universal ribosomal protein uS2 family K02967 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003343 481.0
BYDH1_k127_1038641_12 helix_turn_helix, cAMP Regulatory protein K01420 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003806 479.0
BYDH1_k127_1038641_13 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002441 450.0
BYDH1_k127_1038641_14 Protein of unknown function (DUF2490) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005473 366.0
BYDH1_k127_1038641_15 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005482 342.0
BYDH1_k127_1038641_16 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001544 336.0
BYDH1_k127_1038641_17 Peptidyl-prolyl cis-trans isomerase K03775 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001496 319.0
BYDH1_k127_1038641_18 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006514 306.0
BYDH1_k127_1038641_19 Belongs to the skp family K06142 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001277 289.0
BYDH1_k127_1038641_2 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K07277 - - 0.0 1421.0
BYDH1_k127_1038641_20 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 - 4.2.1.59 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002243 287.0
BYDH1_k127_1038641_21 Cytochrome C oxidase, cbb3-type, subunit III K12263 - - 0.000000000000000000000000000000000000000000000000000001963 191.0
BYDH1_k127_1038641_22 InterPro DEAD DEAH box helicase - - - 0.00000000003291 63.0
BYDH1_k127_1038641_23 cytochrome - - - 0.0001073 46.0
BYDH1_k127_1038641_3 zinc metalloprotease K11749 - - 4.656e-282 868.0
BYDH1_k127_1038641_4 Belongs to the anaerobic coproporphyrinogen-III oxidase family - GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006782,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016491,GO:0016627,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0046501,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0051989,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 - 4.975e-275 850.0
BYDH1_k127_1038641_5 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 1.041e-243 757.0
BYDH1_k127_1038641_6 PFAM Glutaredoxin - - - 3.01e-226 706.0
BYDH1_k127_1038641_7 PFAM Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 2.07e-206 642.0
BYDH1_k127_1038641_8 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000119 539.0
BYDH1_k127_1038641_9 Belongs to the CDS family K00981 - 2.7.7.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005882 508.0
BYDH1_k127_10406530_0 ADP-ribosylglycohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004439 575.0
BYDH1_k127_10406530_1 Belongs to the ParB family K03497 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001163 525.0
BYDH1_k127_10406530_2 Belongs to the HpcH HpaI aldolase family K01644,K08691 - 4.1.3.24,4.1.3.25,4.1.3.34 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005538 321.0
BYDH1_k127_10406530_3 PFAM Cobyrinic acid a,c-diamide synthase K03496 - - 0.0000000000000000000000000000000000000000004874 157.0
BYDH1_k127_10406530_4 Trm112p-like protein K09791 - - 0.00000000000000000000000000000003499 125.0
BYDH1_k127_10415583_0 PFAM Outer membrane efflux protein K15725 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008556 601.0
BYDH1_k127_10415583_1 Maf-like protein K06287 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002374 352.0
BYDH1_k127_10415583_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000009099 211.0
BYDH1_k127_10415583_3 Uncharacterized ACR, COG1399 K07040 - - 0.000000005867 56.0
BYDH1_k127_10449966_0 Signal transduction histidine kinase K07636 - 2.7.13.3 3.195e-266 821.0
BYDH1_k127_10449966_1 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) K03183 - 2.1.1.163,2.1.1.201 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006429 490.0
BYDH1_k127_10449966_2 TIGRFAM Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB K07657 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001048 460.0
BYDH1_k127_10449966_3 Protein of unknown function (DUF971) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002398 277.0
BYDH1_k127_10449966_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000000005545 230.0
BYDH1_k127_10449966_5 PFAM Integrase, catalytic core K07497 - - 0.000000000000000006512 82.0
BYDH1_k127_10449966_6 HTH-like domain K07497 - - 0.0000000000002927 70.0
BYDH1_k127_10449966_7 Transposase DDE domain - - - 0.0000000000008772 67.0
BYDH1_k127_10501321_0 VIT family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000692 393.0
BYDH1_k127_10501321_1 Lipid A 3-O-deacylase (PagL) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002493 372.0
BYDH1_k127_10501321_2 TIGRFAM Methionine sulphoxide reductase B K07305 - 1.8.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002501 348.0
BYDH1_k127_10501321_3 Phosphoesterase family K01114 - 3.1.4.3 0.000000001435 59.0
BYDH1_k127_1051120_0 LexA-binding, inner membrane-associated putative hydrolase K07038 - - 1.591e-207 649.0
BYDH1_k127_1051120_1 PFAM Glutamine amidotransferase class-I K01951 - 6.3.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001071 474.0
BYDH1_k127_1051120_2 Dicarboxylate transport - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001725 306.0
BYDH1_k127_10582479_0 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle K01595 - 4.1.1.31 0.0 1767.0
BYDH1_k127_10582479_1 cyanophycin synthetase K03802 - 6.3.2.29,6.3.2.30 0.0 1644.0
BYDH1_k127_10582479_10 Type II secretion system K02653 - - 1.03e-245 761.0
BYDH1_k127_10582479_11 HemY protein N-terminus K02498 - - 5.802e-227 706.0
BYDH1_k127_10582479_12 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 1.072e-222 692.0
BYDH1_k127_10582479_13 PFAM Type II secretion system protein E K02669,K12203 - - 9.246e-217 674.0
BYDH1_k127_10582479_14 Oxidoreductase FAD-binding domain K00523 - 1.17.1.1 5.378e-216 672.0
BYDH1_k127_10582479_15 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03110 - - 1.317e-198 621.0
BYDH1_k127_10582479_16 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 - 2.5.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101 597.0
BYDH1_k127_10582479_17 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006073 592.0
BYDH1_k127_10582479_18 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003192 578.0
BYDH1_k127_10582479_19 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001404 550.0
BYDH1_k127_10582479_2 cyanophycin synthetase K03802 - 6.3.2.29,6.3.2.30 0.0 1425.0
BYDH1_k127_10582479_20 PFAM NAD-dependent epimerase dehydratase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003395 548.0
BYDH1_k127_10582479_21 PFAM Metal-dependent hydrolase HDOD - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006865 526.0
BYDH1_k127_10582479_22 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004342 524.0
BYDH1_k127_10582479_23 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes K03089 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006501 521.0
BYDH1_k127_10582479_24 Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity K18778 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007565 502.0
BYDH1_k127_10582479_25 Part of the ABC transporter FtsEX involved in cellular division K09811 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001697 501.0
BYDH1_k127_10582479_26 uroporphyrinogen III synthase K01719 - 4.2.1.75 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005355 485.0
BYDH1_k127_10582479_27 TIGRFAM Cell division ATP-binding protein FtsE K09812 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003461 417.0
BYDH1_k127_10582479_28 3'-to-5' exoribonuclease specific for small oligoribonucleotides K13288 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006122 380.0
BYDH1_k127_10582479_29 Lumazine binding domain K00793 - 2.5.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001624 354.0
BYDH1_k127_10582479_3 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.0 1060.0
BYDH1_k127_10582479_30 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 - 2.7.1.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001256 345.0
BYDH1_k127_10582479_31 Conserved hypothetical protein 95 K08316 - 2.1.1.171 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001442 340.0
BYDH1_k127_10582479_32 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001238 319.0
BYDH1_k127_10582479_33 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 - 2.5.1.78 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000812 308.0
BYDH1_k127_10582479_34 Yqey-like protein K09117 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006878 259.0
BYDH1_k127_10582479_35 Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG) K01095 - 3.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000001958 248.0
BYDH1_k127_10582479_36 diol metabolic process K01724 - 4.2.1.96 0.0000000000000000000000000000000000000000000000000000000000000000000006663 237.0
BYDH1_k127_10582479_37 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.0000000000000000000000000000000000000000000000000000000000000000008006 230.0
BYDH1_k127_10582479_38 EF hand - - - 0.0000000000000000000000000000000000000000000000000000001332 201.0
BYDH1_k127_10582479_39 4Fe-4S binding domain - - - 0.00000000000000000000000000000000000000000000000007488 177.0
BYDH1_k127_10582479_4 PFAM Peptidase M16 K07263 - - 7.706e-283 873.0
BYDH1_k127_10582479_40 Belongs to the bacterial ribosomal protein bS21 family K02970 - - 0.00000000000000000000000000000000003522 134.0
BYDH1_k127_10582479_41 type II secretion system protein E K02670 - - 0.00000000000000000000000000001596 117.0
BYDH1_k127_10582479_42 PFAM IstB domain protein ATP-binding protein - - - 0.0002543 44.0
BYDH1_k127_10582479_5 TIGRFAM Sodium sulphate symporter K11106,K14445 - - 1.312e-269 833.0
BYDH1_k127_10582479_6 Domain of unknown function DUF21 - - - 4.696e-258 797.0
BYDH1_k127_10582479_7 PFAM Peptidase M48 K06013 - 3.4.24.84 5.819e-258 797.0
BYDH1_k127_10582479_8 PFAM Peptidase M16 K07263 - - 8.483e-258 797.0
BYDH1_k127_10582479_9 HDOD domain - - - 5.409e-249 771.0
BYDH1_k127_10633230_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007008 500.0
BYDH1_k127_10633230_1 carbon utilization - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002395 350.0
BYDH1_k127_10633230_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005777 327.0
BYDH1_k127_10633230_3 Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB K02652 - - 0.000000000000000000000000005485 115.0
BYDH1_k127_10633230_4 Belongs to the GSP D family K02453 - - 0.000000000000000000001428 94.0
BYDH1_k127_10638162_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K15726 - - 0.0 1966.0
BYDH1_k127_10638162_1 Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA K12297 - 2.1.1.173,2.1.1.264 0.0 1415.0
BYDH1_k127_10638162_10 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 4.245e-219 681.0
BYDH1_k127_10638162_11 Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling K09001 - 2.7.1.170 7.964e-213 663.0
BYDH1_k127_10638162_12 Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis K00973 - 2.7.7.24 1.386e-197 617.0
BYDH1_k127_10638162_13 May be involved in recombination K03554 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002099 577.0
BYDH1_k127_10638162_14 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002067 489.0
BYDH1_k127_10638162_15 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003494 447.0
BYDH1_k127_10638162_16 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions K01507 - 3.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009526 367.0
BYDH1_k127_10638162_17 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003663 358.0
BYDH1_k127_10638162_18 Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose K01790 - 5.1.3.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003882 357.0
BYDH1_k127_10638162_19 WYL domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003778 354.0
BYDH1_k127_10638162_2 Tex-like protein N-terminal domain K06959 - - 0.0 1397.0
BYDH1_k127_10638162_20 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006397 299.0
BYDH1_k127_10638162_21 Zeta toxin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007409 282.0
BYDH1_k127_10638162_22 Polymer-forming cytoskeletal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000009621 255.0
BYDH1_k127_10638162_23 - K07039 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002214 267.0
BYDH1_k127_10638162_24 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003402 247.0
BYDH1_k127_10638162_25 Required for insertion of 4Fe-4S clusters K15724 - - 0.00000000000000000000000000000000000000000000000000000000000000001286 225.0
BYDH1_k127_10638162_26 Putative prokaryotic signal transducing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000261 224.0
BYDH1_k127_10638162_27 Domain of unknown function (DUF5062) - - - 0.00000000000000000000000000000000000000000000003547 170.0
BYDH1_k127_10638162_28 Protein of unknown function DUF86 - - - 0.00000000000000000000000000000000000000000000005164 173.0
BYDH1_k127_10638162_29 ParD-like antitoxin of type II bacterial toxin-antitoxin system - - - 0.000000000000000000000000000000000000000002082 159.0
BYDH1_k127_10638162_3 Glutaminyl-tRNA synthetase K01886 - 6.1.1.18 0.0 1193.0
BYDH1_k127_10638162_30 DNA-binding protein VF530 - - - 0.00000000000000000000000000000000000000007411 156.0
BYDH1_k127_10638162_31 RNA-binding K14761 - - 0.0000000000000000000000000000000000007623 139.0
BYDH1_k127_10638162_32 HIRAN - - - 0.0000000000000000000000000000001871 128.0
BYDH1_k127_10638162_33 Methyltransferase domain - - - 0.000000000000000000000000000001048 124.0
BYDH1_k127_10638162_34 HicB_like antitoxin of bacterial toxin-antitoxin system - - - 0.0000000000000000000000000001823 119.0
BYDH1_k127_10638162_35 Metal dependent phosphohydrolases with conserved 'HD' motif. K07012 - - 0.000000000000000000000000013 115.0
BYDH1_k127_10638162_36 Nucleotidyltransferase domain - - - 0.0000000000000000000005793 100.0
BYDH1_k127_10638162_37 HicA toxin of bacterial toxin-antitoxin, - - - 0.000000000000000000005131 94.0
BYDH1_k127_10638162_38 Protein of unknown function (DUF433) - - - 0.0000000000000000000141 94.0
BYDH1_k127_10638162_4 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K15727 - - 7.962e-309 948.0
BYDH1_k127_10638162_40 Protein of unknown function DUF86 - - - 0.000000382 52.0
BYDH1_k127_10638162_5 Belongs to the DEAD box helicase family - GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008026,GO:0008104,GO:0008150,GO:0008186,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032991,GO:0033036,GO:0035770,GO:0036464,GO:0042623,GO:0043186,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044424,GO:0044444,GO:0044464,GO:0045495,GO:0051179,GO:0060293,GO:0070035,GO:0140098,GO:1990904 - 2.184e-288 887.0
BYDH1_k127_10638162_6 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 4.704e-284 874.0
BYDH1_k127_10638162_7 PFAM peptidase - - - 3.85e-283 871.0
BYDH1_k127_10638162_8 ABC transporter K02021,K11085 - - 3.314e-279 867.0
BYDH1_k127_10638162_9 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 - 6.1.1.1 3.485e-246 762.0
BYDH1_k127_10721269_0 Polysaccharide biosynthesis protein - - - 0.0 1095.0
BYDH1_k127_10721269_1 PFAM FAD dependent oxidoreductase K00111 - 1.1.5.3 5.825e-321 985.0
BYDH1_k127_10721269_2 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 GO:0003674,GO:0003824,GO:0004370,GO:0005975,GO:0006066,GO:0006071,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019751,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0071704,GO:1901615 2.7.1.30 3.358e-213 672.0
BYDH1_k127_10721269_3 Glycerophosphoryl diester phosphodiesterase family K01126 - 3.1.4.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001063 463.0
BYDH1_k127_10721269_4 glycosyl transferase, family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002283 464.0
BYDH1_k127_10721269_5 Protoglobin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001014 411.0
BYDH1_k127_10721269_6 Ankyrin repeat K06867 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001707 376.0
BYDH1_k127_1077792_0 Belongs to the ABC transporter superfamily K02031,K02032 - - 0.0 1290.0
BYDH1_k127_1077792_1 von Willebrand factor, type A K02448 - - 0.0 1215.0
BYDH1_k127_1077792_10 - - - - 0.00000000000000000000000000000002356 127.0
BYDH1_k127_1077792_11 Phosphate-selective porin O and P K07221 - - 0.0000000000000000000008969 94.0
BYDH1_k127_1077792_2 PFAM binding-protein-dependent transport systems inner membrane component K02034 - - 7.281e-307 943.0
BYDH1_k127_1077792_3 Cytochrome c oxidase, subunit I K04561 - 1.7.2.5 1.277e-290 893.0
BYDH1_k127_1077792_4 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007772 583.0
BYDH1_k127_1077792_5 CbbQ/NirQ/NorQ C-terminal K04748 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004884 535.0
BYDH1_k127_1077792_6 Belongs to the glutathione peroxidase family K00432 - 1.11.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001482 344.0
BYDH1_k127_1077792_7 Cytochrome c K02305 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004789 309.0
BYDH1_k127_1077792_8 Phosphate-selective porin O and P K07221 - - 0.000000000000000000000000000000000000000002218 155.0
BYDH1_k127_1077792_9 - - - - 0.000000000000000000000000000000000007505 138.0
BYDH1_k127_10799180_0 Insecticidal toxin complex protein TcaC - - - 0.0 1856.0
BYDH1_k127_10799180_1 Belongs to the Glu Leu Phe Val dehydrogenases family K00262 - 1.4.1.4 1.152e-288 887.0
BYDH1_k127_10799180_4 Soluble lytic murein transglycosylase L domain K08309 - - 0.0000000000000009852 78.0
BYDH1_k127_11002211_0 Glycosyl transferase family group 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001645 441.0
BYDH1_k127_11002211_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000665 236.0
BYDH1_k127_11002211_2 Diguanylate cyclase with PAS PAC sensor - - - 0.00004129 48.0
BYDH1_k127_11042830_0 PFAM aminotransferase, class I K14267 - 2.6.1.17 5.415e-253 781.0
BYDH1_k127_11042830_1 HI0933-like protein K07007 - - 7.406e-232 721.0
BYDH1_k127_11042830_10 - - - - 0.00000005289 55.0
BYDH1_k127_11042830_2 PFAM Copper resistance D K07245 - - 2.264e-225 698.0
BYDH1_k127_11042830_3 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 - 2.5.1.75 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001232 578.0
BYDH1_k127_11042830_4 Belongs to the transferase hexapeptide repeat family K00674 - 2.3.1.117 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004958 549.0
BYDH1_k127_11042830_5 BON domain K04065 - - 0.000000000000000000000000000000000000000000000000000000000000905 210.0
BYDH1_k127_11042830_6 - - - - 0.0000000000000000000000000000000000000000000000006961 176.0
BYDH1_k127_11042830_7 Protein of unknown function (DUF2909) - - - 0.00000000000000000000000004793 108.0
BYDH1_k127_11042830_9 DDE superfamily endonuclease - - - 0.0000000000000001651 78.0
BYDH1_k127_11291003_0 dehydrogenase, E1 component K00164 - 1.2.4.2 1.981e-286 885.0
BYDH1_k127_11291003_1 Belongs to the citrate synthase family K01647 - 2.3.3.1 2.735e-285 877.0
BYDH1_k127_11291003_2 succinate dehydrogenase fumarate reductase K00240 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009060,GO:0009987,GO:0015980,GO:0016020,GO:0016491,GO:0022900,GO:0022904,GO:0044237,GO:0044464,GO:0045333,GO:0048037,GO:0051536,GO:0051537,GO:0051538,GO:0051539,GO:0051540,GO:0055114,GO:0071944 1.3.5.1,1.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001317 482.0
BYDH1_k127_11291003_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001787 423.0
BYDH1_k127_11291003_4 Flavinator of succinate dehydrogenase K09159 - - 0.000000000000000000000000000000000000000008699 154.0
BYDH1_k127_11291003_5 endonuclease activity - - - 0.00000000000000000000000000000009927 125.0
BYDH1_k127_11326638_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 7.33e-262 809.0
BYDH1_k127_11326638_1 Uncharacterized ACR, YdiU/UPF0061 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001129 548.0
BYDH1_k127_11326638_2 Sulfotransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005041 460.0
BYDH1_k127_11326638_3 Nacht domain - - - 0.00000000000000000000000000000000000000000000000000000000000000006079 226.0
BYDH1_k127_11326638_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000002156 216.0
BYDH1_k127_11326638_5 Nacht domain - - - 0.000000000000000000000000000000000000000000000000000171 186.0
BYDH1_k127_11359049_0 Cytidylyltransferase-like - - - 4.548e-234 725.0
BYDH1_k127_11359049_1 2Fe-2S -binding K02192 - - 0.0000000000000000000000000004554 114.0
BYDH1_k127_11359049_2 Thioredoxin-like domain K03671,K03672 - 1.8.1.8 0.0000000000005034 71.0
BYDH1_k127_11388257_0 Transglycosylase SLT domain K08305 - - 4.375e-255 789.0
BYDH1_k127_11388257_1 AFG1-like ATPase K06916 - - 2.7e-243 753.0
BYDH1_k127_11388257_10 Transposase K07481 - - 0.00000000000000017 80.0
BYDH1_k127_11388257_11 PFAM Transposase, IS4-like K07481 - - 0.0000000000000006346 79.0
BYDH1_k127_11388257_12 - - - - 0.000000004419 62.0
BYDH1_k127_11388257_2 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 2.541e-208 649.0
BYDH1_k127_11388257_3 Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP K01525 - 3.6.1.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001205 525.0
BYDH1_k127_11388257_4 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008839,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016627,GO:0016628,GO:0019752,GO:0019877,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576 1.17.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003132 509.0
BYDH1_k127_11388257_5 PFAM Major facilitator superfamily K08218 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002072 289.0
BYDH1_k127_11388257_6 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K06186 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000009151 254.0
BYDH1_k127_11388257_7 Belongs to the Fur family K03711 - - 0.0000000000000000000000000000000000000000000000000000002963 196.0
BYDH1_k127_11388257_8 Phosphate acyltransferases K00655 - 2.3.1.51 0.0000000000000000000000000000000000000000000000000001601 195.0
BYDH1_k127_11388257_9 - - - - 0.000000000000000000000000000000000000000000000000003146 187.0
BYDH1_k127_1149799_0 Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis K03688 - - 9.52e-246 770.0
BYDH1_k127_1149799_1 Metallo-peptidase family M12B Reprolysin-like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004205 310.0
BYDH1_k127_1149799_2 Transposase K07486 - - 0.000000000000000000000000000000000000000000000000000009118 193.0
BYDH1_k127_1149799_3 COG3316 Transposase and inactivated derivatives K07498 - - 0.000000000000000000004099 93.0
BYDH1_k127_1149799_4 BNR repeat-like domain - - - 0.0000000001249 63.0
BYDH1_k127_1149799_5 Transposase and inactivated derivatives - - - 0.00004802 47.0
BYDH1_k127_1166147_0 Belongs to the UPF0758 family K03630 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001114 433.0
BYDH1_k127_1166147_1 Belongs to the bacterial ribosomal protein bL28 family K02902 - - 0.0000000000000000000000000000000000000000007412 158.0
BYDH1_k127_1166147_2 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.0000000000004242 69.0
BYDH1_k127_1166147_3 Belongs to the bacterial ribosomal protein bL33 family K02913 - - 0.000000000009107 64.0
BYDH1_k127_11696507_0 TRAP transporter T-component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003429 479.0
BYDH1_k127_11696507_1 Phosphoglycerate mutase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001434 405.0
BYDH1_k127_11696507_2 PIN domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000514 258.0
BYDH1_k127_11696507_3 PFAM MgtC SapB transporter - - - 0.0000000000000000000133 91.0
BYDH1_k127_11696507_4 Antitoxin Phd_YefM, type II toxin-antitoxin system - - - 0.000132 48.0
BYDH1_k127_11733539_0 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 - 2.4.1.21 3.052e-308 946.0
BYDH1_k127_11733539_1 Cytochrome c - - - 4.31e-276 850.0
BYDH1_k127_11733539_2 Belongs to the GPI family K01810 - 5.3.1.9 0.00000000000000000000000000000004853 124.0
BYDH1_k127_11757961_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.0 1180.0
BYDH1_k127_11757961_1 TIR domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003142 295.0
BYDH1_k127_11757961_2 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system K09803 - - 0.0000000000000000000000000000000000000000000000000002943 185.0
BYDH1_k127_11757961_3 ParE toxin of type II toxin-antitoxin system, parDE K06218 - - 0.0000000000000000000000000000000000000000000000000009679 184.0
BYDH1_k127_11757961_4 - - - - 0.0000000000000000000000000000004651 125.0
BYDH1_k127_11757961_5 Bacterial antitoxin of type II TA system, VapB - - - 0.000000000000000000000000004188 111.0
BYDH1_k127_11757961_6 Antitoxin component of a toxin-antitoxin (TA) module K18923 - - 0.0000000000000000000003745 98.0
BYDH1_k127_11806080_0 PFAM Transposase, IS4-like - - - 5.587e-239 745.0
BYDH1_k127_11806080_1 iron dependent repressor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003257 519.0
BYDH1_k127_11806080_2 PFAM transposase, IS4 family protein - - - 0.0000000000000000000000001285 106.0
BYDH1_k127_11806080_3 TraB family - - - 0.000000000000007136 74.0
BYDH1_k127_11806080_4 PFAM Transposase, IS4-like - - - 0.000002884 50.0
BYDH1_k127_11853668_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 2.7.7.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001343 563.0
BYDH1_k127_11853668_1 Transposase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000184 488.0
BYDH1_k127_11853668_2 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006014 386.0
BYDH1_k127_11853668_3 Ribosomal protein L17 K02879 - - 0.00000000000000000000000000000000000000000000000000000000000000000001319 234.0
BYDH1_k127_11950275_0 4fe-4S ferredoxin, iron-sulfur binding domain protein K00384,K21567 - 1.18.1.2,1.19.1.1,1.8.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001409 436.0
BYDH1_k127_11950275_1 ferredoxin-NADP+ reductase activity - - - 0.0000000000000000000000000000000000000000000000000000000557 208.0
BYDH1_k127_11950275_2 heat shock protein binding - - - 0.0000000000000000000000000000000000000000000000000000214 192.0
BYDH1_k127_1196610_0 PFAM glycosyl transferase, family 51 K05366 - 2.4.1.129,3.4.16.4 0.0 1473.0
BYDH1_k127_1196610_1 Belongs to the GSP D family K02666 - - 0.0 1208.0
BYDH1_k127_1196610_10 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003081 541.0
BYDH1_k127_1196610_11 CAAX protease self-immunity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001167 535.0
BYDH1_k127_1196610_12 Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor K03524 - 6.3.4.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002936 475.0
BYDH1_k127_1196610_13 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003954 466.0
BYDH1_k127_1196610_14 Phosphoribosyl transferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001757 432.0
BYDH1_k127_1196610_15 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002483 433.0
BYDH1_k127_1196610_16 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006416 430.0
BYDH1_k127_1196610_17 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000122 394.0
BYDH1_k127_1196610_18 2'-5' RNA ligase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001457 396.0
BYDH1_k127_1196610_19 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K01947,K03525 - 2.7.1.33,6.3.4.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004535 381.0
BYDH1_k127_1196610_2 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 5.854e-267 824.0
BYDH1_k127_1196610_20 One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome K02926 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004113 375.0
BYDH1_k127_1196610_21 Pilus assembly protein, PilO K02664 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007596 376.0
BYDH1_k127_1196610_22 Necessary for normal cell division and for the maintenance of normal septation K03978 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003406 372.0
BYDH1_k127_1196610_23 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008547 355.0
BYDH1_k127_1196610_24 Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring K01935 - 6.3.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006756 341.0
BYDH1_k127_1196610_25 The physiological role of BioH is to remove the methyl group introduced by BioC when the pimeloyl moiety is complete. It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway through the hydrolysis of the ester bonds of pimeloyl-ACP esters K02170 - 3.1.1.85 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001714 339.0
BYDH1_k127_1196610_26 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008709 332.0
BYDH1_k127_1196610_27 PFAM Fimbrial assembly K02663 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003103 326.0
BYDH1_k127_1196610_28 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001849 310.0
BYDH1_k127_1196610_29 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006817 295.0
BYDH1_k127_1196610_3 TIGRFAM type IV pilus assembly protein PilM K02662 - - 5.475e-222 690.0
BYDH1_k127_1196610_30 Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide K03216 - 2.1.1.207 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005014 291.0
BYDH1_k127_1196610_31 PFAM Pilus assembly protein K02665 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000008027 291.0
BYDH1_k127_1196610_32 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 - - 0.000000000000000000000000000000000000000000000000000000000000000000000006608 246.0
BYDH1_k127_1196610_33 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 - - 0.00000000000000000000000000000000000000000000000000000000000000000000005325 241.0
BYDH1_k127_1196610_34 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 - - 0.0000000000000000000000000000000000000000000000000000000000000000005349 228.0
BYDH1_k127_1196610_35 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 - - 0.000000000000000000000000000000000000000000000000000000000000000002165 228.0
BYDH1_k127_1196610_36 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 - - 0.000000000000000000000000000000000000000000000000000000000000000008754 225.0
BYDH1_k127_1196610_37 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 - - 0.00000000000000000000000000000000000000000000000000000000000000004218 225.0
BYDH1_k127_1196610_38 - - - - 0.00000000000000000000000000000000000000000000000000000000000001499 216.0
BYDH1_k127_1196610_39 Reduction of activated sulfate into sulfite K00390 - 1.8.4.10,1.8.4.8 0.0000000000000000000000000000000000000000000000000000000000001956 212.0
BYDH1_k127_1196610_4 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00652 - 2.3.1.47 7.915e-210 656.0
BYDH1_k127_1196610_40 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 - - 0.000000000000000000000000000000000000000000000000000000000000481 211.0
BYDH1_k127_1196610_41 Binds to the 23S rRNA K02876 - - 0.000000000000000000000000000000000000000000000000000000000004901 210.0
BYDH1_k127_1196610_42 Involved in the binding of tRNA to the ribosomes K02946 - - 0.0000000000000000000000000000000000000000000000000000000001951 203.0
BYDH1_k127_1196610_43 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 - - 0.000000000000000000000000000000000000000000000000000000000904 203.0
BYDH1_k127_1196610_44 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 - - 0.00000000000000000000000000000000000000000000000000002071 188.0
BYDH1_k127_1196610_45 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit K02895 - - 0.000000000000000000000000000000000000000000000000001034 186.0
BYDH1_k127_1196610_46 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 - - 0.000000000000000000000000000000000000000000000004637 174.0
BYDH1_k127_1196610_47 Ribosomal protein L17 K02879 - - 0.000000000000000000000000000000000000000000000004981 175.0
BYDH1_k127_1196610_48 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 - - 0.000000000000000000000000000000000000000000318 158.0
BYDH1_k127_1196610_49 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.0000000000000000000000000000000000000000664 151.0
BYDH1_k127_1196610_5 Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism K01012 - 2.8.1.6 1.061e-208 649.0
BYDH1_k127_1196610_50 Domain of unknown function (DUF4177) - - - 0.00000000000000000000000000000000000001705 143.0
BYDH1_k127_1196610_51 Ribosomal protein L30 K02907 - - 0.0000000000000000000000003802 106.0
BYDH1_k127_1196610_52 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.00000000000000005157 80.0
BYDH1_k127_1196610_53 Belongs to the universal ribosomal protein uL29 family K02904 - - 0.0000000000000001141 81.0
BYDH1_k127_1196610_54 Belongs to the bacterial ribosomal protein bL36 family K02919 - - 0.0000000000000001341 79.0
BYDH1_k127_1196610_6 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 2.7.7.6 7.045e-206 642.0
BYDH1_k127_1196610_7 Belongs to the ALAD family K01698 GO:0003674,GO:0003824,GO:0004655,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009987,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0043167,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.2.1.24 5.171e-195 610.0
BYDH1_k127_1196610_8 Signal transduction response regulator, receiver K03415 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009536 586.0
BYDH1_k127_1196610_9 Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl- L-methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway K02169 - 2.1.1.197 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005692 582.0
BYDH1_k127_12039345_0 PFAM Major facilitator superfamily K08218 - - 4.994e-277 855.0
BYDH1_k127_12039345_1 Cell wall hydrolase autolysin K01448 - 3.5.1.28 5.12e-268 830.0
BYDH1_k127_12039345_10 MlaD protein K02067 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001052 547.0
BYDH1_k127_12039345_11 Exodeoxyribonuclease III xth K01142 - 3.1.11.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005243 522.0
BYDH1_k127_12039345_12 HDOD domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005023 493.0
BYDH1_k127_12039345_13 Dienelactone hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000171 463.0
BYDH1_k127_12039345_14 Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P) K03414 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001479 443.0
BYDH1_k127_12039345_15 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002724 376.0
BYDH1_k127_12039345_16 N-acetylmuramoyl-L-alanine amidase (Family 2) K03806 GO:0000270,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0006022,GO:0006026,GO:0006027,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0008745,GO:0009056,GO:0009057,GO:0009253,GO:0009254,GO:0009392,GO:0016020,GO:0016787,GO:0016810,GO:0016811,GO:0019867,GO:0030203,GO:0043167,GO:0043169,GO:0043170,GO:0046872,GO:0046914,GO:0061783,GO:0071704,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575 3.5.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003563 370.0
BYDH1_k127_12039345_17 'signal transduction protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001111 359.0
BYDH1_k127_12039345_18 AAA domain, putative AbiEii toxin, Type IV TA system K02065 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008948 352.0
BYDH1_k127_12039345_19 Haem-degrading - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008258 334.0
BYDH1_k127_12039345_2 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 3.369e-258 797.0
BYDH1_k127_12039345_20 ABC-type transport auxiliary lipoprotein component K18480 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001498 335.0
BYDH1_k127_12039345_21 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 - 2.7.4.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008821 300.0
BYDH1_k127_12039345_22 AFG1-like ATPase K06916 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003077 286.0
BYDH1_k127_12039345_23 Response regulator receiver K03413 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000045 252.0
BYDH1_k127_12039345_24 DNA-binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005151 242.0
BYDH1_k127_12039345_25 BrnA antitoxin of type II toxin-antitoxin system - - - 0.00000000000000000000000000000000000000000000000008394 182.0
BYDH1_k127_12039345_26 Threonylcarbamoyl adenosine biosynthesis protein TsaE K06925 - - 0.0000000000000000000000000000000000000000001753 164.0
BYDH1_k127_12039345_27 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system K09803 - - 0.0000000000000006559 81.0
BYDH1_k127_12039345_28 small periplasmic lipoprotein - - - 0.000000000004374 66.0
BYDH1_k127_12039345_29 Prokaryotic dksA/traR C4-type zinc finger - - - 0.0000000002477 63.0
BYDH1_k127_12039345_3 Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate K08289 - 2.1.2.2 3.52e-248 767.0
BYDH1_k127_12039345_30 PFAM Integrase, catalytic core K07497 - - 0.0000171 48.0
BYDH1_k127_12039345_4 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K18979 - 1.17.99.6 2.171e-240 744.0
BYDH1_k127_12039345_5 Permease MlaE K02066 - - 3.735e-217 677.0
BYDH1_k127_12039345_6 PFAM Squalene phytoene synthase K00801 - 2.5.1.21 6.209e-217 675.0
BYDH1_k127_12039345_7 TIGRFAM DNA polymerase III, delta prime subunit K02341 - 2.7.7.7 1.274e-211 659.0
BYDH1_k127_12039345_8 NmrA-like family K00091 - 1.1.1.219 1.03e-203 635.0
BYDH1_k127_12039345_9 Belongs to the glucose-6-phosphate 1-epimerase family K01792 - 5.1.3.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000428 588.0
BYDH1_k127_12136529_0 PFAM glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001036 368.0
BYDH1_k127_12136529_1 PFAM sugar transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003112 281.0
BYDH1_k127_12136529_2 COG0438 Glycosyltransferase - - - 0.0000000000000000000000000000000000000000001575 174.0
BYDH1_k127_12136529_3 Capsular polysaccharide biosynthesis protein - - - 0.000000000001072 79.0
BYDH1_k127_12136529_4 Bacterial cellulose synthase subunit - - - 0.00001189 59.0
BYDH1_k127_12136529_5 PFAM GGDEF domain containing protein - - - 0.00001523 56.0
BYDH1_k127_12152944_0 DNA mismatch repair protein MutS - - - 0.0 1039.0
BYDH1_k127_12152944_1 ABC-type branched-chain amino acid transport systems, periplasmic component K01999 - - 1.555e-273 844.0
BYDH1_k127_12152944_10 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000004072 220.0
BYDH1_k127_12152944_11 - - - - 0.0000000000000000000000001738 106.0
BYDH1_k127_12152944_12 BrnA antitoxin of type II toxin-antitoxin system - - - 0.000000000001045 68.0
BYDH1_k127_12152944_2 SMART Diguanylate phosphodiesterase - - - 1.335e-271 846.0
BYDH1_k127_12152944_3 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903,K14067 - 6.2.1.5,6.2.1.9 4.458e-242 751.0
BYDH1_k127_12152944_4 MacB-like periplasmic core domain K02004 - - 7.084e-234 726.0
BYDH1_k127_12152944_5 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 2.547e-219 684.0
BYDH1_k127_12152944_6 PFAM Endonuclease exonuclease phosphatase K06896 - 3.1.3.90 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001826 572.0
BYDH1_k127_12152944_7 pfam abc K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003238 354.0
BYDH1_k127_12152944_8 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902,K08692 GO:0003674,GO:0003824,GO:0004774,GO:0004776,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0016874,GO:0016877,GO:0016878,GO:0031974,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0070013 6.2.1.5,6.2.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001502 274.0
BYDH1_k127_12152944_9 Protein of unknown function (DUF2971) - - - 0.000000000000000000000000000000000000000000000000000000000000000001112 236.0
BYDH1_k127_12162437_0 Diguanylate cyclase phosphodiesterase with PAS PAC sensor(S) - - - 0.0 1260.0
BYDH1_k127_12162437_1 Formate acetyltransferase K00656 - 2.3.1.54 0.0 1217.0
BYDH1_k127_12162437_10 Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner K09810 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003584 312.0
BYDH1_k127_12162437_11 Ion channel - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007459 285.0
BYDH1_k127_12162437_12 4Fe-4S single cluster domain K04069 - 1.97.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003921 274.0
BYDH1_k127_12162437_14 PFAM Peptidase S8 S53, subtilisin kexin sedolisin - - - 0.0000000000000000000000000000000109 126.0
BYDH1_k127_12162437_2 SMART ATPase, AAA type, core K06148 - - 0.0 1033.0
BYDH1_k127_12162437_3 TIGRFAM Lipoprotein releasing system, transmembrane protein, LolC E family K09808 - - 8.126e-249 770.0
BYDH1_k127_12162437_5 Belongs to the arginase family K01480 - 3.5.3.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000644 600.0
BYDH1_k127_12162437_6 PFAM Peptidase S8 S53, subtilisin kexin sedolisin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001872 593.0
BYDH1_k127_12162437_7 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009326 513.0
BYDH1_k127_12162437_8 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003224 451.0
BYDH1_k127_12162437_9 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002253 322.0
BYDH1_k127_1221335_0 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 - 1.9.3.1 0.0 1065.0
BYDH1_k127_1221335_1 FAD linked oxidases, C-terminal domain K00102,K03777 - 1.1.2.4,1.1.5.12 5.158e-277 854.0
BYDH1_k127_1221335_10 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 - 2.7.2.8 0.0000000000000000000000000003104 113.0
BYDH1_k127_1221335_11 Glycosyl transferase family 4 K13007 - - 0.000000000000000000000000009627 112.0
BYDH1_k127_1221335_12 Protein of unknown function (DUF2970) - - - 0.0000000000000000000003886 96.0
BYDH1_k127_1221335_2 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001223 575.0
BYDH1_k127_1221335_3 cytochrome c oxidase, subunit III K02276 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002241 574.0
BYDH1_k127_1221335_4 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002628 460.0
BYDH1_k127_1221335_5 SURF1-like protein K14998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001814 413.0
BYDH1_k127_1221335_6 transport-associated - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000455 345.0
BYDH1_k127_1221335_7 Two component signalling adaptor domain K02659 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005118 318.0
BYDH1_k127_1221335_8 PFAM Cytochrome c oxidase assembly protein CtaG Cox11 K02258 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006904 316.0
BYDH1_k127_1221335_9 signal sequence binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003344 268.0
BYDH1_k127_12216992_0 Cytidylyltransferase-like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007061 307.0
BYDH1_k127_12216992_1 Haemolysin-type calcium-binding repeat (2 copies) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003111 278.0
BYDH1_k127_12216992_2 2Fe-2S -binding K02192 - - 0.000000000000000000000000000000000004748 138.0
BYDH1_k127_12216992_3 - - - - 0.00000000000000000000000000000000003086 137.0
BYDH1_k127_12216992_4 PFAM NAD-dependent glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.000000000001866 68.0
BYDH1_k127_12232898_0 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 9.687e-231 716.0
BYDH1_k127_12232898_1 ABC transporter K06020 - 3.6.3.25 0.0000000000000000000000000000000000000000000000000000000000000002763 220.0
BYDH1_k127_12232898_2 - - - - 0.0000000000000000000000006179 104.0
BYDH1_k127_12232898_3 PFAM plasmid - - - 0.0000000000000001835 80.0
BYDH1_k127_12272562_0 Signal transduction response regulator, receiver - - - 8.506e-231 716.0
BYDH1_k127_12272562_1 Diguanylate cyclase - - - 1.041e-214 720.0
BYDH1_k127_12272562_2 PFAM Transposase, IS4-like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002948 354.0
BYDH1_k127_12272562_3 transposase activity - - - 0.00000000000000000000000008007 108.0
BYDH1_k127_12272562_4 transposition - - - 0.0000000000000006696 78.0
BYDH1_k127_12272562_5 PFAM Transposase, IS4-like K07481 - - 0.0000000000001187 70.0
BYDH1_k127_12272562_6 - - - - 0.00000000001041 75.0
BYDH1_k127_12272562_7 Helicase associated domain - - - 0.000001301 51.0
BYDH1_k127_12276521_0 Belongs to the HpcH HpaI aldolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006569 306.0
BYDH1_k127_12276521_1 Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003498 271.0
BYDH1_k127_12276521_2 D-isomer specific 2-hydroxyacid dehydrogenase K12972 - 1.1.1.79,1.1.1.81 0.000000000000000000000000000000000000000000000005786 184.0
BYDH1_k127_12276521_3 glycerol-3-phosphate dehydrogenase [NAD(P)+] activity K00057 - 1.1.1.94 0.0000000001592 63.0
BYDH1_k127_12276521_4 DNA recombination - - - 0.0000000007696 70.0
BYDH1_k127_12276521_5 Domain of unknown function (DUF4105) - - - 0.000000009119 59.0
BYDH1_k127_12276521_6 PFAM IstB domain protein ATP-binding protein - - - 0.0008326 44.0
BYDH1_k127_12312734_0 Protein of unknown function (DUF3570) - - - 0.0 1441.0
BYDH1_k127_12312734_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009777 435.0
BYDH1_k127_12312734_2 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001197 316.0
BYDH1_k127_12312734_3 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002466 302.0
BYDH1_k127_12312734_4 Redoxin domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007307 289.0
BYDH1_k127_12312734_5 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001351 242.0
BYDH1_k127_12312734_6 - - - - 0.00000000000000000000000000000000000000000000000000003861 191.0
BYDH1_k127_12312734_7 Domain of unknown function (DUF4266) - - - 0.00000000000000000000000000003358 117.0
BYDH1_k127_12313838_0 Transcriptional regulator, LysR K10918,K18900 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001905 567.0
BYDH1_k127_12313838_1 Belongs to the pirin family K06911 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008456 377.0
BYDH1_k127_12313838_2 Alpha/beta hydrolase family - - - 0.000000000000001825 77.0
BYDH1_k127_12462372_0 DNA methylase K00590 - 2.1.1.113 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006175 391.0
BYDH1_k127_12462372_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002888 286.0
BYDH1_k127_12462372_3 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 - - 0.000000000000000003229 85.0
BYDH1_k127_12462372_4 - - - - 0.00000000000002779 77.0
BYDH1_k127_12462372_5 DegT/DnrJ/EryC1/StrS aminotransferase family K04127 - 5.1.1.17 0.0001548 46.0
BYDH1_k127_12506300_0 Orn/Lys/Arg decarboxylase, C-terminal domain K01583 - 4.1.1.19 0.0 1193.0
BYDH1_k127_12506300_1 PFAM Lytic transglycosylase-like, catalytic - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000109 319.0
BYDH1_k127_12506300_2 PFAM Peptidyl-prolyl cis-trans isomerase, cyclophilin-type K03767 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000001206 203.0
BYDH1_k127_12538899_0 Subunit R is required for both nuclease and ATPase activities, but not for modification K01153 - 3.1.21.3 2.341e-233 729.0
BYDH1_k127_12538899_1 RIO1 family K07178 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002292 504.0
BYDH1_k127_12538899_2 Subunit R is required for both nuclease and ATPase activities, but not for modification K01153 - 3.1.21.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002423 502.0
BYDH1_k127_12538899_3 - - - - 0.0000000000000000000000000000000000002957 146.0
BYDH1_k127_12538899_4 Bacteriophage replication gene A protein (GPA) - - - 0.0000000000003424 70.0
BYDH1_k127_12546295_0 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 0.0 1170.0
BYDH1_k127_12546295_1 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.0000000000000000000000000000000000000000000000000000000000002031 213.0
BYDH1_k127_12546295_2 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.00000000000000000000000001255 110.0
BYDH1_k127_12546295_3 Belongs to the bacterial ribosomal protein bL34 family K02914 - - 0.00000000000000000809 83.0
BYDH1_k127_12546295_4 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.00000000267 57.0
BYDH1_k127_12650693_0 Cytochrome c-type biogenesis protein CcmF K02198 - - 0.0 1317.0
BYDH1_k127_12650693_1 RuBisCO catalyzes two reactions the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site K01601 - 4.1.1.39 3.306e-318 975.0
BYDH1_k127_12650693_10 Bacterial regulatory helix-turn-helix protein, lysR family K21703 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008449 590.0
BYDH1_k127_12650693_11 alpha/beta hydrolase fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002961 571.0
BYDH1_k127_12650693_12 CbbQ/NirQ/NorQ C-terminal K04748 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007966 545.0
BYDH1_k127_12650693_13 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02195 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003615 487.0
BYDH1_k127_12650693_14 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02194 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006649 399.0
BYDH1_k127_12650693_15 PEP-CTERM motif - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005738 386.0
BYDH1_k127_12650693_16 once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system K02193 - 3.6.3.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000393 378.0
BYDH1_k127_12650693_17 oxidoreductase DsbE K02199 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001998 360.0
BYDH1_k127_12650693_18 subunit of a heme lyase K02200 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004595 307.0
BYDH1_k127_12650693_19 PFAM Alkyl hydroperoxide reductase K03564 GO:0003674,GO:0003824,GO:0004601,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0008379,GO:0009636,GO:0009987,GO:0016209,GO:0016491,GO:0016684,GO:0019725,GO:0033554,GO:0034599,GO:0042221,GO:0042592,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044464,GO:0045454,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0051920,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1990748 1.11.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005665 297.0
BYDH1_k127_12650693_2 von Willebrand factor, type A - - - 4.635e-292 897.0
BYDH1_k127_12650693_20 Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH K02197 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003194 277.0
BYDH1_k127_12650693_21 Outer membrane lipoprotein Slp family K07285 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001885 277.0
BYDH1_k127_12650693_22 SelR domain K07305,K12267 - 1.8.4.11,1.8.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000462 265.0
BYDH1_k127_12650693_23 ribulose bisphosphate carboxylase, small chain K01602 - 4.1.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000002086 250.0
BYDH1_k127_12650693_24 Isoprenylcysteine carboxyl methyltransferase (ICMT) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002672 244.0
BYDH1_k127_12650693_25 - - - - 0.00000000000000000000000000000000000000000000000000000000000000001017 226.0
BYDH1_k127_12650693_26 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.0000000000000000000000000000000000000000000000000000001871 196.0
BYDH1_k127_12650693_27 Antibiotic biosynthesis monooxygenase - - - 0.000000000000000000000000000000000000000000000000000003675 191.0
BYDH1_k127_12650693_28 - - - - 0.00000000000000000000000000000000000009963 142.0
BYDH1_k127_12650693_29 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02196 - - 0.0000000000008281 70.0
BYDH1_k127_12650693_3 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 1.444e-284 877.0
BYDH1_k127_12650693_30 Histidine kinase K07680,K07778,K11617,K14988 - 2.7.13.3 0.000000000983 62.0
BYDH1_k127_12650693_4 Na H antiporter NhaC K03315 - - 2.391e-274 848.0
BYDH1_k127_12650693_5 MFS_1 like family - - - 1.62e-256 792.0
BYDH1_k127_12650693_6 Tetratricopeptide repeat K02200 - - 1.691e-247 768.0
BYDH1_k127_12650693_7 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 - 2.1.1.190 1.048e-233 725.0
BYDH1_k127_12650693_8 alcohol dehydrogenase K00001 - 1.1.1.1 3.453e-217 678.0
BYDH1_k127_12650693_9 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000567 610.0
BYDH1_k127_12661564_0 The M ring may be actively involved in energy transduction K02409 - - 0.0 1004.0
BYDH1_k127_12661564_1 ATP synthase alpha/beta family, nucleotide-binding domain K02412 - 3.6.3.14 6.536e-294 903.0
BYDH1_k127_12661564_2 response regulator K10943 - - 7.731e-242 751.0
BYDH1_k127_12661564_3 Signal transduction histidine kinase K10942 - 2.7.13.3 1.587e-233 725.0
BYDH1_k127_12661564_4 Flagellar hook-length control K02414 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002259 530.0
BYDH1_k127_12661564_5 Flagellar motor switch K02410 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004131 454.0
BYDH1_k127_12661564_6 flagellar assembly protein FliH K02411 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006505 405.0
BYDH1_k127_12661564_7 Flagellar FliJ protein K02413 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003658 260.0
BYDH1_k127_12661564_8 ISXO2-like transposase domain - - - 0.0005102 43.0
BYDH1_k127_12735255_0 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 2.818e-254 788.0
BYDH1_k127_12735255_1 A domain family that is part of the cupin metalloenzyme superfamily. K18850 - 1.14.11.47 4.194e-221 688.0
BYDH1_k127_12735255_10 Pfam Transposase - - - 0.000000000001138 70.0
BYDH1_k127_12735255_11 Transposase DDE domain - - - 0.000000000007704 64.0
BYDH1_k127_12735255_12 Pfam Transposase - - - 0.00000000001258 67.0
BYDH1_k127_12735255_2 Peptidase family S49 K04773 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001092 556.0
BYDH1_k127_12735255_3 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002421 391.0
BYDH1_k127_12735255_4 TIGRFAM Methionine sulphoxide reductase B K07305 - 1.8.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009335 333.0
BYDH1_k127_12735255_5 - - - - 0.00000000000000000000000001519 109.0
BYDH1_k127_12735255_6 - - - - 0.0000000000000000000000111 100.0
BYDH1_k127_12735255_8 PFAM transposase, IS4 family protein - - - 0.000000000000000003466 83.0
BYDH1_k127_12735255_9 - - - - 0.0000000000007462 70.0
BYDH1_k127_12770934_0 Mechanosensitive ion channel K05802,K22051 - - 0.0 1582.0
BYDH1_k127_12770934_1 McrBC 5-methylcytosine restriction system component K19147 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001286 423.0
BYDH1_k127_12770934_2 DsrE/DsrF-like family - - - 0.000000000000000000000000000000000000000000000000000000000000000004433 226.0
BYDH1_k127_12770934_3 - - - - 0.000000000000000000000000000000000000000002488 159.0
BYDH1_k127_12770934_4 PFAM Integrase, catalytic core K07497 - - 0.0000000000000000002912 89.0
BYDH1_k127_12770934_5 Putative transposase - - - 0.00000000000000007075 81.0
BYDH1_k127_1329564_0 decarboxylase - - - 1.606e-284 875.0
BYDH1_k127_1329564_1 Putative beta-barrel porin-2, OmpL-like. bbp2 - - - 4.077e-275 849.0
BYDH1_k127_1329564_10 Universal stress protein K06149 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006348 291.0
BYDH1_k127_1329564_11 Belongs to the UPF0225 family K09858 - - 0.00000000000000000000000000000000000000000000000000000000000000000001279 234.0
BYDH1_k127_1329564_12 Small Multidrug Resistance protein K03297 - - 0.0000000000000000000000000000000000000000000000000000001376 196.0
BYDH1_k127_1329564_13 - - - - 0.000000000000000003843 83.0
BYDH1_k127_1329564_2 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346,K03502 GO:0000731,GO:0003674,GO:0003824,GO:0003887,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0006139,GO:0006259,GO:0006281,GO:0006301,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016604,GO:0016607,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019985,GO:0031974,GO:0031981,GO:0032991,GO:0033554,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0035770,GO:0036464,GO:0042276,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0070013,GO:0071704,GO:0071897,GO:0090304,GO:0140097,GO:1901360,GO:1901362,GO:1901576,GO:1990904 2.7.7.7 3.971e-214 668.0
BYDH1_k127_1329564_3 D-isomer specific 2-hydroxyacid dehydrogenase K00018,K00058 - 1.1.1.29,1.1.1.399,1.1.1.95 2.178e-203 634.0
BYDH1_k127_1329564_4 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 1.64e-200 628.0
BYDH1_k127_1329564_5 Serine aminopeptidase, S33 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001296 543.0
BYDH1_k127_1329564_6 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K05807 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001535 510.0
BYDH1_k127_1329564_7 PFAM Type IV pilus assembly PilZ - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000225 493.0
BYDH1_k127_1329564_8 PFAM Abortive infection protein K07052 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008359 439.0
BYDH1_k127_1329564_9 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length K04760 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007531 359.0
BYDH1_k127_1344009_0 PFAM transposase, IS4 family protein K07481 - - 2.841e-218 686.0
BYDH1_k127_1344009_1 D-isomer specific 2-hydroxyacid dehydrogenase K03778 - 1.1.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005059 355.0
BYDH1_k127_1344009_2 Flavin-binding monooxygenase-like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007082 342.0
BYDH1_k127_1344009_3 Domain of unknown function (DUF4156) - - - 0.00000000000000000000000000000000000000000000000009508 179.0
BYDH1_k127_1344009_4 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.0000000000000000000000000000000000000000000001381 170.0
BYDH1_k127_1344009_5 VanZ like family - - - 0.000000000000672 73.0
BYDH1_k127_1344009_6 D-isomer specific 2-hydroxyacid dehydrogenase K03778 - 1.1.1.28 0.00000000003529 66.0
BYDH1_k127_1485168_0 Flagellar basal body rod FlgEFG protein C-terminal K02396 - - 0.0 1045.0
BYDH1_k127_1485168_1 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 6.209e-320 981.0
BYDH1_k127_1485168_10 Belongs to the flagella basal body rod proteins family K02392 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003522 442.0
BYDH1_k127_1485168_11 Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P-ring assembly K02386 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003222 427.0
BYDH1_k127_1485168_12 Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation K02393 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007685 412.0
BYDH1_k127_1485168_13 Beta-lactamase enzyme family K07262 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007412 387.0
BYDH1_k127_1485168_14 Required for flagellar hook formation. May act as a scaffolding protein K02389 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001372 373.0
BYDH1_k127_1485168_15 Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body K02387 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002541 259.0
BYDH1_k127_1485168_16 Belongs to the flagella basal body rod proteins family K02388 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004835 247.0
BYDH1_k127_1485168_17 Protein of unknown function (DUF498/DUF598) - - - 0.0000000000000000000000000000000000000000000000000000000000000000001364 231.0
BYDH1_k127_1485168_18 Belongs to the transcriptional regulatory Fis family K03557 - - 0.0000000000000000000000000000000000000000008165 156.0
BYDH1_k127_1485168_19 - - - - 0.0000000000000000000000000000000000000005419 148.0
BYDH1_k127_1485168_2 Belongs to the GARS family K01945 - 6.3.4.13 8.225e-267 825.0
BYDH1_k127_1485168_20 Phosphopantetheine attachment site - - - 0.000000000000000000000000000000000000002787 147.0
BYDH1_k127_1485168_3 Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation K02394 - - 4.423e-218 679.0
BYDH1_k127_1485168_4 Bacterial flagellin N-terminal helical region K02397 - - 1.553e-208 653.0
BYDH1_k127_1485168_5 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05540 - - 3.448e-208 648.0
BYDH1_k127_1485168_6 Rod binding protein K02395 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003972 596.0
BYDH1_k127_1485168_7 Flagellar basal body rod protein K02390 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004675 547.0
BYDH1_k127_1485168_8 TIGRFAM Ubiquinone biosynthesis hydroxylase, UbiH UbiF VisC COQ6 K03185 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001172 453.0
BYDH1_k127_1485168_9 Belongs to the flagella basal body rod proteins family K02391 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003039 447.0
BYDH1_k127_1494702_0 MMPL family K07003 - - 0.0 1544.0
BYDH1_k127_1494702_1 Selenide, water dikinase K01008 - 2.7.9.3 0.0 1330.0
BYDH1_k127_1494702_10 AI-2E family transporter - - - 9.467e-214 665.0
BYDH1_k127_1494702_11 Catalyzes the transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA K06917 - - 3.129e-208 650.0
BYDH1_k127_1494702_12 flagellar motor switch protein FliM K02416 - - 9.35e-199 620.0
BYDH1_k127_1494702_13 NmrA-like family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000337 563.0
BYDH1_k127_1494702_14 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009572 532.0
BYDH1_k127_1494702_15 Plays a role in the flagellum-specific transport system K02419 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008077 482.0
BYDH1_k127_1494702_16 Role in flagellar biosynthesis K02421 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004079 468.0
BYDH1_k127_1494702_17 Alpha/beta hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003297 469.0
BYDH1_k127_1494702_18 TIGRFAM HAD-superfamily hydrolase, subfamily IB (PSPase-like) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000231 455.0
BYDH1_k127_1494702_19 Belongs to the DnaA family K10763 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000117 438.0
BYDH1_k127_1494702_2 AMP-dependent synthetase K00666 - - 0.0 1178.0
BYDH1_k127_1494702_20 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000166 404.0
BYDH1_k127_1494702_21 Protein of unknown function (DUF3108) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001518 396.0
BYDH1_k127_1494702_22 Papain family cysteine protease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002429 375.0
BYDH1_k127_1494702_23 MlaC protein K07323 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001701 354.0
BYDH1_k127_1494702_24 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003111 287.0
BYDH1_k127_1494702_25 Flagellar motor switch K02417,K03225 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000454 287.0
BYDH1_k127_1494702_26 Controls the rotational direction of flagella during chemotaxis K02415 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003969 272.0
BYDH1_k127_1494702_27 ISXO2-like transposase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000009383 271.0
BYDH1_k127_1494702_28 Activator of Hsp90 ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000006492 245.0
BYDH1_k127_1494702_29 PFAM Transposase IS200 like K07491 - - 0.00000000000000000000000000000000000000000000000000000000000001608 217.0
BYDH1_k127_1494702_3 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 1.335e-320 983.0
BYDH1_k127_1494702_30 Peptidoglycan-binding domain 1 protein - - - 0.000000000000000000000000000000000000000000000000000000000002209 213.0
BYDH1_k127_1494702_31 Role in flagellar biosynthesis K02420 - - 0.0000000000000000000000000000000000000000000007985 166.0
BYDH1_k127_1494702_32 Phosphopantetheine attachment site - - - 0.00000000000000000000000000000000000000002357 153.0
BYDH1_k127_1494702_33 flagellar biosynthesis protein K02418 - - 0.00000000000000000000000000000000005417 138.0
BYDH1_k127_1494702_35 glycosyl transferase, family 2 - - - 0.00002569 47.0
BYDH1_k127_1494702_4 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00819 - 2.6.1.13 1.31e-295 908.0
BYDH1_k127_1494702_5 Membrane - - - 2.695e-268 837.0
BYDH1_k127_1494702_6 Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB NOP family K03500 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0031974,GO:0031981,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0046483,GO:0070013,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:1901360 2.1.1.176 1.693e-265 819.0
BYDH1_k127_1494702_7 PFAM aminotransferase, class I K00652 - 2.3.1.47 1.381e-250 774.0
BYDH1_k127_1494702_8 Domain of unknown function (DUF3463) - - - 2.968e-248 766.0
BYDH1_k127_1494702_9 Phosphoribosylformylglycinamidine cyclo-ligase K01933 - 6.3.3.1 1.023e-218 679.0
BYDH1_k127_1629350_0 Outer membrane efflux protein - - - 0.0 1289.0
BYDH1_k127_1629350_1 PFAM Glycosyl transferase, family 2 K11936 - - 5.098e-267 824.0
BYDH1_k127_1629350_2 GGDEF domain - - - 0.000000000000000000000000000000000007736 136.0
BYDH1_k127_1672736_0 PFAM Lytic transglycosylase-like, catalytic - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001907 372.0
BYDH1_k127_1672736_1 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002088 252.0
BYDH1_k127_1672736_2 Alginate export - - - 0.00000000000000000000000000000000000000000000000000000832 192.0
BYDH1_k127_1672736_3 Uncharacterized small protein (DUF2292) - - - 0.0007318 42.0
BYDH1_k127_1700606_0 sulfite reductase, dissimilatory-type alpha subunit K11180 - 1.8.99.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004407 447.0
BYDH1_k127_1700606_1 DsrC like protein K11179 - - 0.000000000000000000000000000000000000000000000004828 173.0
BYDH1_k127_1700606_2 Cas6 Crispr - - - 0.0000000000000000000000000000000000000000004971 166.0
BYDH1_k127_1700606_3 - - - - 0.0000000000000000000001744 99.0
BYDH1_k127_1711748_0 May be involved in recombinational repair of damaged DNA K03631 - - 1.285e-310 958.0
BYDH1_k127_1711748_1 Signal transduction histidine kinase K07637 - 2.7.13.3 1.159e-265 821.0
BYDH1_k127_1711748_10 PFAM Integrase catalytic region - - - 0.0000007037 50.0
BYDH1_k127_1711748_2 Catalyzes the ferrous insertion into protoporphyrin IX K01772 - 4.99.1.1,4.99.1.9 4.197e-231 716.0
BYDH1_k127_1711748_3 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 1.305e-204 638.0
BYDH1_k127_1711748_4 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008153 578.0
BYDH1_k127_1711748_5 PFAM Signal transduction response regulator, receiver K07660 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004872 437.0
BYDH1_k127_1711748_6 Small metal-binding protein - - - 0.00000000000000000000000000000000000000000000000000000004088 199.0
BYDH1_k127_1711748_7 peptidase - - - 0.00000000000000000000000000000000000000000000001131 171.0
BYDH1_k127_1711748_8 membrane - - - 0.000000000000000000000000000000000000000000008462 163.0
BYDH1_k127_1711748_9 - - - - 0.0000000000000000000000000000000000000000004491 161.0
BYDH1_k127_1713023_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 0.0 1734.0
BYDH1_k127_1713023_1 ribonuclease II K01147 - 3.1.13.1 0.0 1165.0
BYDH1_k127_1713023_10 stringent starvation protein B K03600 - - 0.000000000000000000000000000000000000000000000000000000000000000000006661 236.0
BYDH1_k127_1713023_11 transposition K07497 - - 0.00000000000000000000000000000000000000000000000000009608 191.0
BYDH1_k127_1713023_12 transposition K07497 - - 0.00000000000000000000000000001933 124.0
BYDH1_k127_1713023_13 - - - - 0.000003396 49.0
BYDH1_k127_1713023_2 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00412 - - 6.101e-266 819.0
BYDH1_k127_1713023_3 Peptidase family M23 K08259 - 3.4.24.75 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002566 580.0
BYDH1_k127_1713023_4 Cytochrome C1 family K00413 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003362 455.0
BYDH1_k127_1713023_5 SMART Diguanylate phosphodiesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001571 473.0
BYDH1_k127_1713023_6 Gram-negative bacterial TonB protein C-terminal K03832 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008776 449.0
BYDH1_k127_1713023_7 Glutathione S-transferase, N-terminal domain K03599 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001504 399.0
BYDH1_k127_1713023_8 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00411 - 1.10.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004395 395.0
BYDH1_k127_1713023_9 Protein of unknown function (DUF721) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001356 285.0
BYDH1_k127_1754425_0 TIGRFAM DNA polymerase III, alpha subunit K02337 - 2.7.7.7 0.0 2271.0
BYDH1_k127_1754425_1 Peptidase family U32 C-terminal domain K08303 - - 8.884e-282 868.0
BYDH1_k127_1754425_2 The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) K00658 - 2.3.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003872 500.0
BYDH1_k127_1795727_0 Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine cysteine desulfurase (IscS) system K14058 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001571 581.0
BYDH1_k127_1795727_1 Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps K04084 - 1.8.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005171 509.0
BYDH1_k127_1795727_2 Thioredoxin-like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002139 359.0
BYDH1_k127_1795727_3 PFAM Blue (type 1) copper domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005008 294.0
BYDH1_k127_1795727_4 Protein of unknown function, DUF - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001694 280.0
BYDH1_k127_1795727_5 Protein of Unknown function (DUF2784) - - - 0.000000000000000000000000000000000000000000000000000000000000000001163 228.0
BYDH1_k127_1944504_0 PFAM Copper resistance D K07245 - - 0.0 1266.0
BYDH1_k127_1944504_1 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 - 4.1.99.17 0.0 1255.0
BYDH1_k127_1944504_10 Ribosomal RNA adenine dimethylase K00573 - 2.1.1.77 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001813 411.0
BYDH1_k127_1944504_11 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) K00950 - 2.7.6.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004424 329.0
BYDH1_k127_1944504_12 PFAM Copper resistance protein CopC K07156 - - 0.000000000000000000000000000000000000000000000000000000000000000000001179 237.0
BYDH1_k127_1944504_13 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000006123 233.0
BYDH1_k127_1944504_14 Domain of Unknown Function (DUF748) - - - 0.0000000000004698 68.0
BYDH1_k127_1944504_2 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 0.0 1213.0
BYDH1_k127_1944504_3 Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control K00970 - 2.7.7.19 4.588e-290 892.0
BYDH1_k127_1944504_4 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 - - 3.336e-284 875.0
BYDH1_k127_1944504_5 TIGRFAM type I secretion outer membrane protein, TolC K12340 - - 1.01e-206 650.0
BYDH1_k127_1944504_6 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 4.408e-206 644.0
BYDH1_k127_1944504_7 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006622 535.0
BYDH1_k127_1944504_8 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 - 6.3.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004215 495.0
BYDH1_k127_1944504_9 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004979 479.0
BYDH1_k127_1979236_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K15726 - - 0.0 1801.0
BYDH1_k127_1979236_1 cytochrome C peroxidase - - - 0.0 1313.0
BYDH1_k127_1979236_10 Protein of unknown function (DUF1499) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000858 405.0
BYDH1_k127_1979236_11 NUDIX domain K01515 - 3.6.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003415 401.0
BYDH1_k127_1979236_12 PFAM Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005488 334.0
BYDH1_k127_1979236_13 Thioredoxin-like domain K03671,K03672 - 1.8.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002039 286.0
BYDH1_k127_1979236_14 Glycine-zipper domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002141 240.0
BYDH1_k127_1979236_15 Protein of unknown function (DUF3579) - - - 0.00000000000000000000000000000000000000000000000000000000000009076 214.0
BYDH1_k127_1979236_16 - - - - 0.00000000000000000000000000000000000000000000000000000006836 196.0
BYDH1_k127_1979236_17 MerR HTH family regulatory protein K18997 - - 0.000000000000000000000000000000000000000000000000000003116 191.0
BYDH1_k127_1979236_18 - - - - 0.0000000000000000000000000000000000000000000000000001474 188.0
BYDH1_k127_1979236_19 - - - - 0.0000000000000000000000000000000000003604 141.0
BYDH1_k127_1979236_2 PFAM Multicopper oxidase, type K04753,K08100,K14588 - 1.3.3.5 0.0 1000.0
BYDH1_k127_1979236_21 DDE domain - - - 0.000000000000000006146 85.0
BYDH1_k127_1979236_3 Putative Na+/H+ antiporter - - - 2.763e-261 806.0
BYDH1_k127_1979236_4 PFAM Peptidase S1 S6, chymotrypsin Hap K08070 - 1.3.1.74 5.587e-240 743.0
BYDH1_k127_1979236_5 outer membrane efflux protein K15725 - - 3.481e-233 725.0
BYDH1_k127_1979236_6 Bacterial protein of unknown function (DUF839) K07093 - - 3.757e-227 707.0
BYDH1_k127_1979236_7 Putative aminopeptidase - - - 5.803e-206 644.0
BYDH1_k127_1979236_8 PFAM heat shock protein DnaJ K05516 - - 7.249e-196 612.0
BYDH1_k127_1979236_9 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K15727 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000257 612.0
BYDH1_k127_1996498_0 TIGRFAM Acetolactate synthase, large subunit, biosynthetic K01652 - 2.2.1.6 0.0 1139.0
BYDH1_k127_1996498_1 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 0.0 1072.0
BYDH1_k127_1996498_10 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005989 502.0
BYDH1_k127_1996498_11 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000473 428.0
BYDH1_k127_1996498_12 Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage K08311 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007755 385.0
BYDH1_k127_1996498_13 TIGRFAM Acetolactate synthase, small subunit K01653 GO:0003674,GO:0003824,GO:0003984,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005948,GO:0006082,GO:0006520,GO:0006549,GO:0006573,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009097,GO:0009099,GO:0009987,GO:0016053,GO:0016740,GO:0016744,GO:0019752,GO:0032991,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494,GO:1990234 2.2.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002728 312.0
BYDH1_k127_1996498_14 Thioredoxin-like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008425 300.0
BYDH1_k127_1996498_15 Transglycosylase SLT domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003089 251.0
BYDH1_k127_1996498_16 RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs K03666 - - 0.000000000000000000000000000000000000000009582 154.0
BYDH1_k127_1996498_2 Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell K00982 - 2.7.7.42,2.7.7.89 0.0 1041.0
BYDH1_k127_1996498_3 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 0.0 1003.0
BYDH1_k127_1996498_4 modulator of DNA gyrase K03568 - - 7.567e-312 957.0
BYDH1_k127_1996498_5 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 3.169e-213 666.0
BYDH1_k127_1996498_6 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 3.496e-213 664.0
BYDH1_k127_1996498_7 PFAM Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 2.878e-211 658.0
BYDH1_k127_1996498_8 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K01501,K11206 - 3.5.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004491 556.0
BYDH1_k127_1996498_9 HflC and HflK could encode or regulate a protease K04088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004492 544.0
BYDH1_k127_2104185_0 Response regulator receiver K02487,K03407,K06596 - 2.7.13.3 0.0 2625.0
BYDH1_k127_2104185_1 ABC transporter K06147 - - 0.0 1440.0
BYDH1_k127_2104185_10 Protein of unknown function, DUF484 K02488 - 2.7.7.65 2.447e-234 726.0
BYDH1_k127_2104185_11 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 - 2.3.1.1,2.3.1.35 9.801e-218 680.0
BYDH1_k127_2104185_12 PFAM Sulfotransferase K01014 - 2.8.2.1 3.198e-203 632.0
BYDH1_k127_2104185_13 Bacterial regulatory helix-turn-helix protein, lysR family K21703 - - 3.015e-199 621.0
BYDH1_k127_2104185_14 AAA domain (dynein-related subfamily) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005085 597.0
BYDH1_k127_2104185_15 Belongs to the Nudix hydrolase family K03574 - 3.6.1.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002741 581.0
BYDH1_k127_2104185_16 Protein of unknown function (DUF815) K06923 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004789 562.0
BYDH1_k127_2104185_17 Protein of unknown function (DUF455) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002549 535.0
BYDH1_k127_2104185_18 PFAM Methionine biosynthesis MetW - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000426 430.0
BYDH1_k127_2104185_19 PFAM RNA polymerase sigma factor 70, region 4 type 2 K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000238 361.0
BYDH1_k127_2104185_2 PFAM chemotaxis K02660 - - 0.0 1197.0
BYDH1_k127_2104185_20 Ribulose bisphosphate carboxylase, small chain K01602 - 4.1.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002545 315.0
BYDH1_k127_2104185_21 Domain of unknown function (DUF1854) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007093 291.0
BYDH1_k127_2104185_22 CHAP domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002725 280.0
BYDH1_k127_2104185_23 Thioesterase superfamily K10806 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001811 278.0
BYDH1_k127_2104185_24 Protein of unknown function (DUF3619) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002087 278.0
BYDH1_k127_2104185_25 system, fructose subfamily IIA component K02821 - 2.7.1.194 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001485 267.0
BYDH1_k127_2104185_26 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003133 241.0
BYDH1_k127_2104185_27 CHAP domain - - - 0.000000000000000000000000000000000000000000000000000002263 190.0
BYDH1_k127_2104185_28 Cold shock protein domain K03704 - - 0.000000000000000000000000000000000000004569 145.0
BYDH1_k127_2104185_29 Peptidase M4 - - - 0.000000000000000000000000000000005402 132.0
BYDH1_k127_2104185_3 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K08483 - 2.7.3.9 0.0 1102.0
BYDH1_k127_2104185_30 Protein of unknown function (DUF1353) - - - 0.0000000000000000000000000000000236 128.0
BYDH1_k127_2104185_31 PTS HPr component phosphorylation site K11189 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.00000000000000000000000000000002641 127.0
BYDH1_k127_2104185_32 Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase K09862 - - 0.0000000000000000000000000000002828 124.0
BYDH1_k127_2104185_34 Domain of unknown function (DUF4372) - - - 0.0000003845 56.0
BYDH1_k127_2104185_4 RuBisCO catalyzes two reactions the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site K01601 - 4.1.1.39 0.0 1009.0
BYDH1_k127_2104185_5 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 GO:0006082,GO:0006520,GO:0006566,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009987,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0071704,GO:1901564,GO:1901605 4.3.1.19 0.0 999.0
BYDH1_k127_2104185_6 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007 - 2.7.9.2 1.678e-265 819.0
BYDH1_k127_2104185_7 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 1.16e-254 787.0
BYDH1_k127_2104185_8 PFAM ketose-bisphosphate aldolase, class-II K01624 - 4.1.2.13 1.166e-248 770.0
BYDH1_k127_2104185_9 Transfers a succinyl group from succinyl-CoA to L- homoserine, forming succinyl-L-homoserine K00641 - 2.3.1.31 9.867e-248 764.0
BYDH1_k127_2115408_0 Alginate export - - - 0.0 1028.0
BYDH1_k127_2115408_1 PFAM amidohydrolase - - - 1.586e-231 725.0
BYDH1_k127_2115408_2 Radical SAM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007184 546.0
BYDH1_k127_2115408_3 TatD related DNase K03424 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001907 422.0
BYDH1_k127_2115408_4 PFAM Di-haem cytochrome c peroxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000166 338.0
BYDH1_k127_2115408_5 6-pyruvoyl tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004906 306.0
BYDH1_k127_2115408_6 PEP-CTERM motif - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009009 297.0
BYDH1_k127_2262994_0 Belongs to the AlaDH PNT family K00259 - 1.4.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003752 461.0
BYDH1_k127_2262994_1 KR domain K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008723 429.0
BYDH1_k127_2262994_2 Ankyrin repeat K06867 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005356 341.0
BYDH1_k127_2262994_3 TatD related DNase K03424 - - 0.0000000000000000000000000000000000000000000512 160.0
BYDH1_k127_2371389_0 nitroreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007599 404.0
BYDH1_k127_2371389_1 RF-1 domain K15034 - - 0.00000000000000000000000000000000000000000000000000000000000000000004426 233.0
BYDH1_k127_2371389_2 protein conserved in bacteria K09941 - - 0.00000000000000000000000000000000000000000000000000000000000002651 217.0
BYDH1_k127_2390836_0 Heavy metal transport detoxification protein K17686,K19597 - 3.6.3.54 0.0 1416.0
BYDH1_k127_2390836_1 FtsX-like permease family K02004 - - 2.836e-273 844.0
BYDH1_k127_2390836_10 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003471 499.0
BYDH1_k127_2390836_11 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000024 489.0
BYDH1_k127_2390836_12 Short-chain dehydrogenase reductase SDR K00059,K03793 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008667,GO:0009058,GO:0009237,GO:0009238,GO:0009239,GO:0009712,GO:0009713,GO:0009987,GO:0016043,GO:0016491,GO:0016627,GO:0016628,GO:0018130,GO:0018958,GO:0019184,GO:0019290,GO:0019438,GO:0019540,GO:0019748,GO:0022607,GO:0034641,GO:0042802,GO:0043043,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044550,GO:0046189,GO:0046483,GO:0051186,GO:0051188,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 1.1.1.100,1.5.1.33 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002387 479.0
BYDH1_k127_2390836_13 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001578 432.0
BYDH1_k127_2390836_14 imidazoleglycerol-phosphate dehydratase K01693 - 4.2.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001279 377.0
BYDH1_k127_2390836_15 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008867 364.0
BYDH1_k127_2390836_16 Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP K01496,K11755 - 3.5.4.19,3.6.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000007649 244.0
BYDH1_k127_2390836_17 HIT domain K02503 - - 0.0000000000000000000000000000000000000000000000000000000000000000000006379 237.0
BYDH1_k127_2390836_18 Protein of unknown function, DUF393 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000473 235.0
BYDH1_k127_2390836_19 phosphoribosyl-ATP diphosphatase activity K01523 - 3.6.1.31 0.0000000000000000000000000000000000000000000000000000000000002497 211.0
BYDH1_k127_2390836_2 Lipocalin-like domain - - - 5.206e-233 722.0
BYDH1_k127_2390836_20 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.000000000000000000000000000000000000000000000000000001494 192.0
BYDH1_k127_2390836_21 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation K03117 - - 0.000000000000000000000000000000000000000000000000003018 186.0
BYDH1_k127_2390836_22 PFAM Heavy metal transport detoxification protein K07213 - - 0.000000000000000000000000000000004586 128.0
BYDH1_k127_2390836_23 Belongs to the UPF0102 family K07460 - - 0.00000000000000000000001325 103.0
BYDH1_k127_2390836_24 - - - - 0.0000000000000000000006976 96.0
BYDH1_k127_2390836_26 - - - - 0.000000000002573 66.0
BYDH1_k127_2390836_3 Putative S-adenosyl-L-methionine-dependent methyltransferase - - - 8.659e-233 726.0
BYDH1_k127_2390836_4 LppC putative lipoprotein K07121 - - 8.846e-216 676.0
BYDH1_k127_2390836_5 Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate K01465 - 3.5.2.3 3.324e-208 649.0
BYDH1_k127_2390836_6 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 4.404e-207 646.0
BYDH1_k127_2390836_7 'signal transduction protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002315 560.0
BYDH1_k127_2390836_8 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 GO:0000105,GO:0000162,GO:0003674,GO:0003824,GO:0003949,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006547,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003789 499.0
BYDH1_k127_2390836_9 TIGRFAM Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 GO:0000105,GO:0000162,GO:0003674,GO:0003824,GO:0003949,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006547,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001044 497.0
BYDH1_k127_2439877_0 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 4.393e-302 929.0
BYDH1_k127_2439877_1 Belongs to the MurCDEF family K01924 - 6.3.2.8 7.169e-294 903.0
BYDH1_k127_2439877_10 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.0000000000000000003034 87.0
BYDH1_k127_2439877_2 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929,K15792 - 6.3.2.10,6.3.2.13 9.728e-270 834.0
BYDH1_k127_2439877_3 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 3.962e-263 811.0
BYDH1_k127_2439877_4 Peptidoglycan polymerase that is essential for cell division K03588 - - 6.843e-232 719.0
BYDH1_k127_2439877_5 Cell wall formation K01921 - 6.3.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002951 580.0
BYDH1_k127_2439877_6 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007088 505.0
BYDH1_k127_2439877_7 Cell wall formation K00075 - 1.3.1.98 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000116 453.0
BYDH1_k127_2439877_8 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000357 411.0
BYDH1_k127_2439877_9 POTRA domain, FtsQ-type - - - 0.000000000000000000000000000000000000006271 155.0
BYDH1_k127_244633_0 PFAM Aminotransferase, class V K00830 - 2.6.1.44,2.6.1.45,2.6.1.51 1.293e-261 807.0
BYDH1_k127_2450995_0 endonuclease exonuclease phosphatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001075 488.0
BYDH1_k127_2450995_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005952 350.0
BYDH1_k127_2450995_2 Glycine-zipper domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002694 295.0
BYDH1_k127_2450995_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000008671 246.0
BYDH1_k127_2450995_4 PFAM Ammonia monooxygenase particulate methane monooxygenase, subunit C K10946 - - 0.0000000000000000008281 85.0
BYDH1_k127_2564736_0 Double sensory domain of two-component sensor kinase - - - 0.0 1521.0
BYDH1_k127_2564736_1 Beta-Casp domain K07576 - - 1.873e-296 910.0
BYDH1_k127_2564736_2 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 6.098e-286 880.0
BYDH1_k127_2564736_3 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00833 - 2.6.1.62 2.189e-283 872.0
BYDH1_k127_2564736_4 Protein of unknown function (DUF3422) - - - 9.461e-258 798.0
BYDH1_k127_2564736_5 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.000000000000000000000000000000000000002075 148.0
BYDH1_k127_2834097_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 0.0 1144.0
BYDH1_k127_2834097_1 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 0.0 1045.0
BYDH1_k127_2834097_10 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0032296,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363 3.1.26.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000255 447.0
BYDH1_k127_2834097_11 RNA polymerase sigma factor K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001787 391.0
BYDH1_k127_2834097_12 Anti sigma-E protein RseA, N-terminal domain K03597 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001659 335.0
BYDH1_k127_2834097_13 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001093 321.0
BYDH1_k127_2834097_14 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006824 302.0
BYDH1_k127_2834097_15 CreA protein K05805 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002224 302.0
BYDH1_k127_2834097_16 MEKHLA domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001306 270.0
BYDH1_k127_2834097_17 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.0000000000000000000000000000000000000000000000000000000000000000000003068 238.0
BYDH1_k127_2834097_18 Domain of unknown function (DUF4845) - - - 0.0000000000000000000000000000000000000000000000000000000002326 204.0
BYDH1_k127_2834097_19 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.000000000000000000000000000000004495 128.0
BYDH1_k127_2834097_2 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00382 GO:0003674,GO:0003824,GO:0004148,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005759,GO:0006082,GO:0006084,GO:0006085,GO:0006086,GO:0006090,GO:0006139,GO:0006163,GO:0006164,GO:0006464,GO:0006637,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0018130,GO:0018335,GO:0019362,GO:0019438,GO:0019538,GO:0019637,GO:0019693,GO:0019752,GO:0031974,GO:0031981,GO:0032787,GO:0032991,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0035383,GO:0035384,GO:0036211,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043436,GO:0043543,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044272,GO:0044281,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045239,GO:0045240,GO:0045252,GO:0045254,GO:0046390,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0061732,GO:0070013,GO:0071616,GO:0071704,GO:0072521,GO:0072522,GO:0072524,GO:0090407,GO:0106077,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902494,GO:1990204,GO:1990234 1.8.1.4 4.314e-290 893.0
BYDH1_k127_2834097_20 Glutaredoxin-like domain (DUF836) K00384 - 1.8.1.9 0.000000000000000000000005385 104.0
BYDH1_k127_2834097_22 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.00001017 47.0
BYDH1_k127_2834097_3 Belongs to the peptidase S1C family K04771 - 3.4.21.107 3.385e-288 888.0
BYDH1_k127_2834097_4 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 3.093e-267 824.0
BYDH1_k127_2834097_5 Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide-linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N-acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides K00997,K01207 - 2.7.8.7,3.2.1.52 3.814e-224 696.0
BYDH1_k127_2834097_6 MucB/RseB C-terminal domain K03598 - - 7.674e-196 612.0
BYDH1_k127_2834097_7 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001016 555.0
BYDH1_k127_2834097_8 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003748 552.0
BYDH1_k127_2834097_9 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 - 2.6.99.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002193 447.0
BYDH1_k127_2857547_0 Toxic component of a toxin-antitoxin (TA) module. An RNase K18828 - - 0.000000000000000000000000000000000000000000000000001133 186.0
BYDH1_k127_2857547_1 ParE toxin of type II toxin-antitoxin system, parDE - - - 0.00000000000000000000000000000000000004637 145.0
BYDH1_k127_2857547_2 .,Oxidizes proline to glutamate for use as a carbon and nitrogen source - - - 0.000000000000000000000000000000005964 129.0
BYDH1_k127_2857547_3 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system K19166 - - 0.00000000000000000000000000001883 117.0
BYDH1_k127_2857547_4 SpoVT AbrB - - - 0.00000000000000000000000000003027 118.0
BYDH1_k127_2857547_5 ABC transporter K01996 - - 0.0000002234 52.0
BYDH1_k127_2907951_0 Haemolysin-type calcium-binding repeat (2 copies) - - - 0.0 2908.0
BYDH1_k127_2907951_1 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 6.09e-315 968.0
BYDH1_k127_2907951_10 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K01563,K11991 - 3.5.4.33,3.8.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001668 320.0
BYDH1_k127_2907951_11 low molecular weight K01104 GO:0000271,GO:0003674,GO:0003824,GO:0004721,GO:0004725,GO:0005975,GO:0005976,GO:0006464,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009242,GO:0009987,GO:0016051,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019538,GO:0033692,GO:0034637,GO:0034645,GO:0035335,GO:0036211,GO:0042578,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044267,GO:0046377,GO:0071704,GO:0140096,GO:1901135,GO:1901137,GO:1901564,GO:1901576 3.1.3.48 0.00000000000000000000000000000000000000000000000000000000000000000000002022 241.0
BYDH1_k127_2907951_12 ErfK YbiS YcfS YnhG family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000008478 234.0
BYDH1_k127_2907951_13 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.000000000000000000000000000000000000000000000000000000001042 201.0
BYDH1_k127_2907951_14 - - - - 0.000000000000000000000000000000000000000000000006263 173.0
BYDH1_k127_2907951_15 addiction module antidote protein HigA K21498 - - 0.0000000000000000001733 89.0
BYDH1_k127_2907951_17 - - - - 0.0000002088 55.0
BYDH1_k127_2907951_18 - - - - 0.000003752 49.0
BYDH1_k127_2907951_2 AMP-dependent synthetase - - - 2.307e-303 934.0
BYDH1_k127_2907951_3 TIGRFAM Mannose-1-phosphate guanylyltransferase mannose-6-phosphate isomerase K16011 - 2.7.7.13,5.3.1.8 9.444e-299 918.0
BYDH1_k127_2907951_4 RNase_H superfamily - - - 1.264e-290 894.0
BYDH1_k127_2907951_5 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 1.359e-288 888.0
BYDH1_k127_2907951_6 PFAM Orn DAP Arg decarboxylase 2 K01586 - 4.1.1.20 8.891e-239 741.0
BYDH1_k127_2907951_7 PFAM Metal-dependent phosphohydrolase, HD K01768 - 4.6.1.1 5.022e-218 682.0
BYDH1_k127_2907951_8 Specifically methylates the 50S ribosomal protein L3 on a specific glutamine residue K07320 - 2.1.1.298 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002221 598.0
BYDH1_k127_2907951_9 Belongs to the pseudouridine synthase RsuA family K06178 - 5.4.99.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002435 515.0
BYDH1_k127_2989245_0 DNA topoisomerase, type IA, central K03169 - 5.99.1.2 0.0 1639.0
BYDH1_k127_2989245_1 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 0.0 1349.0
BYDH1_k127_2989245_10 Sigma-54 interaction domain - - - 6.48e-261 805.0
BYDH1_k127_2989245_11 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA K03500 - 2.1.1.176 2.113e-254 787.0
BYDH1_k127_2989245_12 Belongs to the phosphoglycerate kinase family K00927 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.7.2.3 1.293e-246 763.0
BYDH1_k127_2989245_13 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype K01624 - 4.1.2.13 2.069e-229 710.0
BYDH1_k127_2989245_14 DNA recombination-mediator protein A K04096 - - 3.851e-218 679.0
BYDH1_k127_2989245_15 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 GO:0000166,GO:0003674,GO:0003824,GO:0004365,GO:0005488,GO:0008150,GO:0008152,GO:0016491,GO:0016620,GO:0016903,GO:0036094,GO:0043891,GO:0048037,GO:0050662,GO:0051287,GO:0055114,GO:0097159,GO:1901265,GO:1901363 1.2.1.12 1.543e-215 670.0
BYDH1_k127_2989245_16 SMART ATPase, AAA type, core K09691 - - 5.014e-213 668.0
BYDH1_k127_2989245_17 Lysin motif - - - 8.419e-211 662.0
BYDH1_k127_2989245_18 Glycosyltransferase like family 2 K20444 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002115 612.0
BYDH1_k127_2989245_19 Inositol monophosphatase K01082,K01092 - 3.1.3.25,3.1.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009173 535.0
BYDH1_k127_2989245_2 Signal transduction histidine kinase - - - 0.0 1329.0
BYDH1_k127_2989245_20 PFAM NAD-dependent epimerase dehydratase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001723 514.0
BYDH1_k127_2989245_21 Transport permease protein K09690 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005609 500.0
BYDH1_k127_2989245_22 Glycosyltransferase like family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007496 499.0
BYDH1_k127_2989245_23 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003107 473.0
BYDH1_k127_2989245_24 Glycosyltransferase like family K07011 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003329 468.0
BYDH1_k127_2989245_25 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 - 2.1.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006892 456.0
BYDH1_k127_2989245_26 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 - 2.7.4.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002622 406.0
BYDH1_k127_2989245_27 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 - 4.1.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002724 395.0
BYDH1_k127_2989245_28 Redoxin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005836 388.0
BYDH1_k127_2989245_29 transferase activity, transferring glycosyl groups - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001815 379.0
BYDH1_k127_2989245_3 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 - - 0.0 1116.0
BYDH1_k127_2989245_30 Domain of unknown function (DUF4390) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001092 357.0
BYDH1_k127_2989245_31 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001485 352.0
BYDH1_k127_2989245_32 Sulfotransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002347 345.0
BYDH1_k127_2989245_33 Belongs to the Smg family K03747 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001809 313.0
BYDH1_k127_2989245_34 Domain of unknown function (DUF4357) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001141 297.0
BYDH1_k127_2989245_35 Polysaccharide biosynthesis protein K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000282 289.0
BYDH1_k127_2989245_36 Response regulator receiver K02657 - - 0.00000000000000000000000000000000000000000000000000000000000000000000004685 242.0
BYDH1_k127_2989245_37 - - - - 0.000000000000000000000000000000000000000000000000000000000005667 234.0
BYDH1_k127_2989245_38 Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes - - - 0.000000000000000000000000000000000000000000000000000003599 190.0
BYDH1_k127_2989245_39 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K05788 - - 0.00000000000000000000000000000000000000000000000000001629 188.0
BYDH1_k127_2989245_4 Acetyltransferase (GNAT) domain - - - 0.0 1076.0
BYDH1_k127_2989245_40 transferase activity, transferring glycosyl groups K00745,K12988,K18704 - 2.4.1.166,2.7.8.14,2.7.8.47 0.000000000000000000000000000000000000000000000002177 184.0
BYDH1_k127_2989245_41 - - - - 0.000000000000000000000000000000000000000001435 156.0
BYDH1_k127_2989245_42 COG0438 Glycosyltransferase - - - 0.0000000000000000000000000000002767 143.0
BYDH1_k127_2989245_43 Pfam:DUF1049 K08992 - - 0.00000000000000000000000006747 108.0
BYDH1_k127_2989245_44 Domain of unknown function (DUF4357) - - - 0.00000000000000017 80.0
BYDH1_k127_2989245_5 Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA K03498 - - 4.995e-303 930.0
BYDH1_k127_2989245_6 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 2.088e-301 926.0
BYDH1_k127_2989245_7 TrkA-N domain protein K03499 - - 4.922e-285 878.0
BYDH1_k127_2989245_8 Belongs to the acetyltransferase family. ArgA subfamily K14682 - 2.3.1.1 2.175e-278 857.0
BYDH1_k127_2989245_9 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 1.421e-266 825.0
BYDH1_k127_3125270_0 - - - - 0.0 1171.0
BYDH1_k127_3125270_1 ABC transporter transmembrane region K06147 - - 0.0 1105.0
BYDH1_k127_3125270_10 deaminase zinc-binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001411 364.0
BYDH1_k127_3125270_11 PFAM Outer membrane protein, OmpA MotB, C-terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001694 329.0
BYDH1_k127_3125270_12 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03768 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004506 324.0
BYDH1_k127_3125270_13 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005509 259.0
BYDH1_k127_3125270_14 - - - - 0.00000000000000000000000000000000000000000000000000000000001596 206.0
BYDH1_k127_3125270_15 Protein of unknown function (DUF2798) - - - 0.000000000000000000000000000000000000003278 146.0
BYDH1_k127_3125270_16 - - - - 0.00000000000000000000000000325 115.0
BYDH1_k127_3125270_17 PFAM Transposase, IS4-like - - - 0.0000000000007559 69.0
BYDH1_k127_3125270_2 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455 - - 0.0 1053.0
BYDH1_k127_3125270_3 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 - 6.1.1.16 4.805e-290 892.0
BYDH1_k127_3125270_4 Psort location CytoplasmicMembrane, score 10.00 - - - 3.987e-238 740.0
BYDH1_k127_3125270_5 AAA domain K02450 - - 1.428e-229 715.0
BYDH1_k127_3125270_6 MotA/TolQ/ExbB proton channel family K02556 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000702 558.0
BYDH1_k127_3125270_7 Membrane MotB of proton-channel complex MotA/MotB K02557 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001079 553.0
BYDH1_k127_3125270_8 tRNA (guanine-N7-)-methyltransferase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004485 438.0
BYDH1_k127_3125270_9 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K01802,K03767,K03768 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009315 374.0
BYDH1_k127_3141171_0 Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN NodQ subfamily K00955,K00956 - 2.7.1.25,2.7.7.4 1.123e-255 790.0
BYDH1_k127_3141171_1 adenylyltransferase, small subunit K00957 - 2.7.7.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004395 602.0
BYDH1_k127_3278783_0 Fatty acid cis/trans isomerase (CTI) - - - 7.346e-270 851.0
BYDH1_k127_3278783_1 Protein of unknown function (DUF504) - - - 0.0000000000000000000000000000001322 123.0
BYDH1_k127_3278783_2 Phosphoesterase family K01114 - 3.1.4.3 0.00008055 46.0
BYDH1_k127_3278783_3 Peptidase family M28 - - - 0.0008146 43.0
BYDH1_k127_3293184_0 COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001579 477.0
BYDH1_k127_3293184_1 SMART ATPase, AAA type, core K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009003 367.0
BYDH1_k127_3293184_2 Domain of unknown function (DUF1993) K09983 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003178 333.0
BYDH1_k127_3301477_0 PFAM transposase, mutator type K07493 - - 2.503e-256 791.0
BYDH1_k127_3301477_1 PFAM N-6 DNA methylase K03427 - 2.1.1.72 0.0000000000000000000000000000000000000000000000000000000000000000005146 229.0
BYDH1_k127_3301477_2 Transposase - - - 0.00000000000000000000000000002133 119.0
BYDH1_k127_3308798_0 TIGRFAM type I secretion outer membrane protein, TolC K12538 - - 1.791e-259 803.0
BYDH1_k127_3308798_1 TIGRFAM Type I secretion membrane fusion protein, HlyD K02022,K12537,K12542 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000148 438.0
BYDH1_k127_3308798_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005382 271.0
BYDH1_k127_3308798_4 Belongs to the bacterial ribosomal protein bL34 family K02914 - - 0.00000000000000000809 83.0
BYDH1_k127_3461719_0 Belongs to the GSP D family K02453 - - 0.0 1153.0
BYDH1_k127_3461719_1 DNA polymerase III K01141 - 3.1.11.1 6.699e-285 878.0
BYDH1_k127_3461719_2 Type II secretory pathway, pseudopilin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001594 380.0
BYDH1_k127_3461719_3 Prokaryotic N-terminal methylation motif K02456 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001641 316.0
BYDH1_k127_3461719_4 Endoribonuclease L-PSP - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000117 260.0
BYDH1_k127_3461719_5 PFAM type II secretion system protein G K02456 - - 0.000000000000000000000000000000000000000000000000000000000000000000000328 239.0
BYDH1_k127_3461719_6 DDE superfamily endonuclease - - - 0.000000000000000000000000005997 111.0
BYDH1_k127_3461719_7 DDE superfamily endonuclease - - - 0.00000000002511 64.0
BYDH1_k127_3552287_0 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002505 557.0
BYDH1_k127_3552287_1 Tellurite resistance protein TerB K05801 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003622 492.0
BYDH1_k127_3552287_2 Transport permease protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004388 467.0
BYDH1_k127_3552287_3 Glutathione S-transferase, C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000116 329.0
BYDH1_k127_3552287_4 Belongs to the BolA IbaG family - - - 0.000000000000000000000000000000000000000000001207 165.0
BYDH1_k127_3552287_5 BNR repeat-like domain - - - 0.00002848 47.0
BYDH1_k127_3560312_0 PFAM Transposase, IS4-like K07481 - - 1.333e-256 792.0
BYDH1_k127_3560312_1 - - - - 0.000000000000000000000000000000000000000001147 158.0
BYDH1_k127_3560312_2 pathogenesis K01119 - 3.1.3.6,3.1.4.16 0.00001262 49.0
BYDH1_k127_3593108_0 Ketoacyl-synthetase C-terminal extension - - - 0.0 5122.0
BYDH1_k127_3593108_1 Ketoacyl-synthetase C-terminal extension K15676 - - 0.0 3033.0
BYDH1_k127_3593108_10 alpha beta alpha domain I K01835,K01840,K15778 GO:0000271,GO:0000287,GO:0003674,GO:0003824,GO:0004614,GO:0004615,GO:0005488,GO:0005975,GO:0005976,GO:0006082,GO:0006629,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0009058,GO:0009059,GO:0009103,GO:0009243,GO:0009244,GO:0009311,GO:0009312,GO:0009405,GO:0009987,GO:0016051,GO:0016053,GO:0016853,GO:0016866,GO:0016868,GO:0017144,GO:0019752,GO:0033692,GO:0034637,GO:0034645,GO:0042120,GO:0042121,GO:0043167,GO:0043169,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044281,GO:0044283,GO:0044419,GO:0046394,GO:0046401,GO:0046402,GO:0046872,GO:0051704,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 5.4.2.2,5.4.2.8 1.598e-283 872.0
BYDH1_k127_3593108_11 Putative beta-barrel porin-2, OmpL-like. bbp2 - - - 2.252e-259 803.0
BYDH1_k127_3593108_12 Belongs to the aspartokinase family K00928 GO:0003674,GO:0003824,GO:0004072,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0019202,GO:0019752,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576 2.7.2.4 8.546e-257 793.0
BYDH1_k127_3593108_13 OsmC-like protein K06889,K07397 - - 1.114e-244 758.0
BYDH1_k127_3593108_14 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 - 2.5.1.6 1.13e-243 754.0
BYDH1_k127_3593108_15 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00382,K00627 - 1.8.1.4,2.3.1.12 1.42e-243 756.0
BYDH1_k127_3593108_16 MacB-like periplasmic core domain K02004 - - 4.958e-239 741.0
BYDH1_k127_3593108_17 Alpha/beta hydrolase family - - - 4.676e-232 719.0
BYDH1_k127_3593108_18 A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response - - - 8.555e-208 647.0
BYDH1_k127_3593108_19 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 2.854e-207 648.0
BYDH1_k127_3593108_2 Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00163 - 1.2.4.1 0.0 1804.0
BYDH1_k127_3593108_20 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 1.204e-201 627.0
BYDH1_k127_3593108_21 Methylenetetrahydrofolate reductase K00297 GO:0000166,GO:0003674,GO:0003824,GO:0004489,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006575,GO:0006725,GO:0006730,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009396,GO:0009987,GO:0016043,GO:0016053,GO:0016491,GO:0016645,GO:0016646,GO:0018130,GO:0019438,GO:0019752,GO:0022607,GO:0034641,GO:0036094,GO:0042398,GO:0042558,GO:0042559,GO:0043167,GO:0043168,GO:0043436,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046653,GO:0046654,GO:0048037,GO:0050660,GO:0050662,GO:0051186,GO:0051188,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:0071949,GO:0097159,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 1.5.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006978 552.0
BYDH1_k127_3593108_22 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001883 531.0
BYDH1_k127_3593108_23 PFAM Class II aldolase adducin K01628 - 4.1.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004689 516.0
BYDH1_k127_3593108_24 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009198 472.0
BYDH1_k127_3593108_25 PFAM NAD-dependent glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004123 456.0
BYDH1_k127_3593108_26 Hep Hag repeat protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000875 429.0
BYDH1_k127_3593108_27 PFAM Signal transduction response regulator, receiver - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009818 421.0
BYDH1_k127_3593108_28 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000186 415.0
BYDH1_k127_3593108_29 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001866 392.0
BYDH1_k127_3593108_3 Histidine kinase - - - 0.0 1366.0
BYDH1_k127_3593108_30 PFAM Exopolysaccharide synthesis, ExoD - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004535 386.0
BYDH1_k127_3593108_31 Maf-like protein K06287 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002052 385.0
BYDH1_k127_3593108_32 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 - 2.1.1.177 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001483 299.0
BYDH1_k127_3593108_33 PFAM RNA-binding S4 K04762 - - 0.0000000000000000000000000000000000000000000000000000000000000000000003607 239.0
BYDH1_k127_3593108_34 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000007419 237.0
BYDH1_k127_3593108_35 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.0000000000000000000000000000000000000000000000000000005788 194.0
BYDH1_k127_3593108_36 protein conserved in bacteria K09941 - - 0.00000000000000000000000000000000000000000000000000001795 188.0
BYDH1_k127_3593108_37 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.00000000000000000000000000000000000000000000000000005107 187.0
BYDH1_k127_3593108_38 Zinc-finger domain - - - 0.000000000000000000000000000000000000001052 148.0
BYDH1_k127_3593108_4 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.0 1108.0
BYDH1_k127_3593108_5 ADP-glyceromanno-heptose 6-epimerase activity - - - 0.0 1037.0
BYDH1_k127_3593108_6 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01916,K01950 - 6.3.1.5,6.3.5.1 1.984e-320 984.0
BYDH1_k127_3593108_7 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 GO:0000096,GO:0000097,GO:0000166,GO:0001666,GO:0002376,GO:0002437,GO:0002439,GO:0002544,GO:0003674,GO:0003824,GO:0004013,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006152,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0006950,GO:0006952,GO:0006954,GO:0006955,GO:0007584,GO:0007610,GO:0007622,GO:0007623,GO:0008150,GO:0008152,GO:0008652,GO:0009056,GO:0009058,GO:0009063,GO:0009066,GO:0009069,GO:0009116,GO:0009119,GO:0009164,GO:0009605,GO:0009628,GO:0009987,GO:0009991,GO:0016053,GO:0016054,GO:0016787,GO:0016801,GO:0016802,GO:0017076,GO:0017144,GO:0019439,GO:0019510,GO:0019752,GO:0030554,GO:0031667,GO:0033353,GO:0034641,GO:0034655,GO:0034656,GO:0036094,GO:0036293,GO:0042219,GO:0042221,GO:0042278,GO:0042454,GO:0042745,GO:0042802,GO:0042995,GO:0043005,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044272,GO:0044273,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046128,GO:0046130,GO:0046394,GO:0046395,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0046700,GO:0048037,GO:0048511,GO:0048512,GO:0050662,GO:0050667,GO:0050896,GO:0051186,GO:0051187,GO:0051287,GO:0055086,GO:0070482,GO:0071268,GO:0071704,GO:0072521,GO:0072523,GO:0097159,GO:0097458,GO:0098604,GO:0120025,GO:1901135,GO:1901136,GO:1901265,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606,GO:1901607,GO:1901657,GO:1901658 3.3.1.1 1.283e-307 944.0
BYDH1_k127_3593108_8 Ribonuclease E/G family K08301 - - 4.004e-298 916.0
BYDH1_k127_3593108_9 PFAM Peptidase M48 - - - 7.921e-291 897.0
BYDH1_k127_3638288_0 TonB-dependent receptor K16090 - - 0.0 1253.0
BYDH1_k127_3638288_1 - - - - 0.0 1084.0
BYDH1_k127_3643536_0 Histidine kinase K20974 - 2.7.13.3 0.0 2204.0
BYDH1_k127_3643536_1 TIGRFAM Undecaprenyl-phosphate glucose phosphotransferase, WcaJ K03606 - - 2.91e-291 897.0
BYDH1_k127_3643536_2 Protein conserved in bacteria - - - 2.909e-237 738.0
BYDH1_k127_3643536_3 Putative diguanylate phosphodiesterase - - - 4.661e-210 659.0
BYDH1_k127_3643536_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005835 351.0
BYDH1_k127_3643536_5 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002392 280.0
BYDH1_k127_3899164_0 CobW/HypB/UreG, nucleotide-binding domain K04652 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003101 563.0
BYDH1_k127_3899164_1 TPM domain K06872 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009574 475.0
BYDH1_k127_3899164_2 Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide K04656 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004294 411.0
BYDH1_k127_3899164_3 LemA family K03744 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004867 384.0
BYDH1_k127_3899164_4 HupE UreJ protein K03192 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003025 327.0
BYDH1_k127_3899164_5 TPM domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006422 303.0
BYDH1_k127_3899164_6 hydrogenase maturation protease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005967 262.0
BYDH1_k127_3899164_7 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000007287 247.0
BYDH1_k127_3899164_8 Probably plays a role in a hydrogenase nickel cofactor insertion step K04651 - - 0.000000000000000000000000000000000000000000000000000000000002225 209.0
BYDH1_k127_3899164_9 TIGRFAM Undecaprenyl-phosphate glucose phosphotransferase, WcaJ K03606 - - 0.000000000000000000007449 91.0
BYDH1_k127_3900354_0 Ribosomal RNA adenine dimethylase - - - 3.877e-208 647.0
BYDH1_k127_3900354_1 Uncharacterized protein conserved in bacteria (DUF2130) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005436 290.0
BYDH1_k127_3900354_2 PIN domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004349 246.0
BYDH1_k127_3996699_0 Uncharacterized protein conserved in bacteria (DUF2309) K09822 - - 0.0 1889.0
BYDH1_k127_3996699_1 Proton-conducting membrane transporter K00342 - 1.6.5.3 3.495e-270 837.0
BYDH1_k127_3996699_2 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus - - - 1.528e-268 833.0
BYDH1_k127_3996699_3 Proton-conducting membrane transporter K00342 - 1.6.5.3 1.189e-261 814.0
BYDH1_k127_3996699_4 Proton-conducting membrane transporter K00342 - 1.6.5.3 2.818e-217 677.0
BYDH1_k127_3996699_5 Carboxysome Shell Carbonic Anhydrase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000751 471.0
BYDH1_k127_3996699_6 Phosphorylase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007246 355.0
BYDH1_k127_3996699_7 Carboxysome Shell Carbonic Anhydrase - - - 0.000000000000000000000000000000006481 128.0
BYDH1_k127_3999136_0 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 0.0 1575.0
BYDH1_k127_3999136_1 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.0 1298.0
BYDH1_k127_3999136_10 diguanylate cyclase K02488 - 2.7.7.65 1.11e-236 736.0
BYDH1_k127_3999136_11 Metallo-beta-lactamase superfamily K01069 - 3.1.2.6 1.381e-196 614.0
BYDH1_k127_3999136_12 NADH:flavin oxidoreductase / NADH oxidase family K10680 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004124 604.0
BYDH1_k127_3999136_13 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 - 5.4.99.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007518 586.0
BYDH1_k127_3999136_14 Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate K03179 - 2.5.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001151 574.0
BYDH1_k127_3999136_15 Fructosamine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002615 542.0
BYDH1_k127_3999136_16 Belongs to the peptidase M48B family K03799 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001182 533.0
BYDH1_k127_3999136_17 membrane K08994 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004325 497.0
BYDH1_k127_3999136_18 Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001102 409.0
BYDH1_k127_3999136_19 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004989 365.0
BYDH1_k127_3999136_2 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 0.0 1282.0
BYDH1_k127_3999136_20 NADH ubiquinone oxidoreductase, 20 Kd subunit K18007 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 1.12.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001602 361.0
BYDH1_k127_3999136_21 Removes the pyruvyl group from chorismate, with concomitant aromatization of the ring, to provide 4- hydroxybenzoate (4HB) for the ubiquinone pathway K03181 - 4.1.3.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006333 356.0
BYDH1_k127_3999136_22 Lipocalin-like domain K03098 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001337 329.0
BYDH1_k127_3999136_23 Required for maturation of 30S ribosomal subunits K09748 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004832 303.0
BYDH1_k127_3999136_24 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002121 251.0
BYDH1_k127_3999136_25 Endoribonuclease L-PSP K09022 - 3.5.99.10 0.000000000000000000000000000000000000000000000000000000000000000000000002967 245.0
BYDH1_k127_3999136_26 synthase K01737 - 4.1.2.50,4.2.3.12 0.00000000000000000000000000000000000000000000000000000000000000000000001554 245.0
BYDH1_k127_3999136_27 - - - - 0.000000000000000000000000000000000000000000000000000000001782 202.0
BYDH1_k127_3999136_28 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic K05589 - - 0.0000000000000000000000000000000000000000000004097 169.0
BYDH1_k127_3999136_29 Putative member of DMT superfamily (DUF486) K09922 - - 0.000000000000000000000000000000000000000000004835 164.0
BYDH1_k127_3999136_3 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 GO:0001775,GO:0002376,GO:0003674,GO:0003824,GO:0003883,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006213,GO:0006220,GO:0006221,GO:0006241,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008283,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009163,GO:0009165,GO:0009199,GO:0009201,GO:0009208,GO:0009209,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0015949,GO:0016874,GO:0016879,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0032943,GO:0034404,GO:0034641,GO:0034654,GO:0042098,GO:0042100,GO:0042110,GO:0042113,GO:0042221,GO:0042455,GO:0042493,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045321,GO:0046036,GO:0046131,GO:0046132,GO:0046134,GO:0046390,GO:0046483,GO:0046649,GO:0046651,GO:0050896,GO:0055086,GO:0070661,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.4.2 0.0 1119.0
BYDH1_k127_3999136_30 transcriptional regulator, XRE family - - - 0.0000000000000000000000000000000000000001177 151.0
BYDH1_k127_3999136_31 Protein of unknown function (DUF2905) - - - 0.00000000000000000000000000000000004024 134.0
BYDH1_k127_3999136_32 - - - - 0.000000000000000007451 85.0
BYDH1_k127_3999136_4 Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol, an intermediate step in ubiquinone biosynthesis K03182 - 4.1.1.98 0.0 994.0
BYDH1_k127_3999136_5 Participates in both transcription termination and antitermination K02600 - - 2.483e-299 920.0
BYDH1_k127_3999136_6 argininosuccinate lyase K01755 - 4.3.2.1 5.992e-298 919.0
BYDH1_k127_3999136_7 Nickel-dependent hydrogenase K00436 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 1.12.1.2 2.616e-293 904.0
BYDH1_k127_3999136_8 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 GO:0000015,GO:0000287,GO:0003674,GO:0003824,GO:0004634,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005856,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009986,GO:0009987,GO:0016052,GO:0016053,GO:0016310,GO:0016829,GO:0016835,GO:0016836,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0032991,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042802,GO:0042866,GO:0043167,GO:0043169,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046872,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1902494 4.2.1.11 1.343e-265 819.0
BYDH1_k127_3999136_9 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 1.235e-250 775.0
BYDH1_k127_4089698_0 SMART Diguanylate phosphodiesterase - - - 0.0 1080.0
BYDH1_k127_4089698_1 TIGRFAM RND efflux system, outer membrane lipoprotein, NodT K18139 - - 5.758e-247 768.0
BYDH1_k127_4089698_2 PEP-CTERM motif - - - 0.0000000000000003139 85.0
BYDH1_k127_4138273_0 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.0 1355.0
BYDH1_k127_4138273_1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 0.0 1176.0
BYDH1_k127_4138273_10 Uracil DNA glycosylase superfamily K21929 - 3.2.2.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004136 439.0
BYDH1_k127_4138273_11 Tetratricopeptide repeat-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001141 401.0
BYDH1_k127_4138273_12 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995,K08744 - 2.7.8.41,2.7.8.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000446 375.0
BYDH1_k127_4138273_13 Rhodanese Homology Domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000797 279.0
BYDH1_k127_4138273_14 Belongs to the UPF0178 family K09768 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003525 271.0
BYDH1_k127_4138273_15 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 - 2.7.4.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000001915 263.0
BYDH1_k127_4138273_16 Protein of unknown function (DUF465) K09794 - - 0.0000000000000000000000000000000000000001266 151.0
BYDH1_k127_4138273_17 4-oxalocrotonate tautomerase K01821 - 5.3.2.6 0.000000000000000000000000000000003571 128.0
BYDH1_k127_4138273_18 Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis K03688 - - 0.00000000004067 64.0
BYDH1_k127_4138273_2 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 2.096e-298 916.0
BYDH1_k127_4138273_3 synthetase, class II (G H P K01892 - 6.1.1.21 1.594e-264 816.0
BYDH1_k127_4138273_4 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 - 1.17.7.1,1.17.7.3 7.795e-263 810.0
BYDH1_k127_4138273_5 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K17713 - - 1.632e-230 717.0
BYDH1_k127_4138273_6 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 - 2.1.1.192 6.294e-224 695.0
BYDH1_k127_4138273_7 Domain of unknown function (DUF4115) K15539 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001154 605.0
BYDH1_k127_4138273_8 repeat protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001298 492.0
BYDH1_k127_4138273_9 TIGRFAM Pilus biogenesis stability type IV, PilW K02656 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007375 467.0
BYDH1_k127_4199596_0 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 1.916e-241 747.0
BYDH1_k127_4199596_1 Sodium:dicarboxylate symporter family K11102 - - 5.334e-236 733.0
BYDH1_k127_4199596_2 Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen-IX K00228 GO:0003674,GO:0005488,GO:0005515,GO:0042802,GO:0042803,GO:0046983 1.3.3.3 4.203e-205 638.0
BYDH1_k127_4199596_3 PFAM Metal-dependent phosphohydrolase, HD K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003809 600.0
BYDH1_k127_4204942_0 type II secretion system protein E K02454 - - 0.0 1449.0
BYDH1_k127_4204942_1 Patatin-like phospholipase K07001 - - 6.604e-244 754.0
BYDH1_k127_4204942_2 PFAM Integral membrane protein TerC - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009937 436.0
BYDH1_k127_4204942_3 Belongs to the peptidase S33 family K01259 - 3.4.11.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009788 415.0
BYDH1_k127_4204942_4 Belongs to the universal stress protein A family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006506 273.0
BYDH1_k127_4204942_5 cAMP phosphodiesterases class-II K01120 - 3.1.4.17 0.00000000000000000000000000000000000000000000000000000000000000000000000004824 250.0
BYDH1_k127_4204942_6 Protein of unknown function (DUF2442) - - - 0.0000000000000000000000000000000000000000000147 163.0
BYDH1_k127_4204942_7 - - - - 0.000000000000000000000000006363 112.0
BYDH1_k127_4231297_0 Binding-protein-dependent transport system inner membrane component K02011 - - 0.0 1012.0
BYDH1_k127_4231297_1 50S ribosome-binding GTPase K06946 - - 6.219e-304 935.0
BYDH1_k127_4231297_10 Bacterial protein of unknown function (DUF882) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000584 380.0
BYDH1_k127_4231297_11 Belongs to the ompA family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001437 317.0
BYDH1_k127_4231297_12 Belongs to the thioredoxin family K03671 - - 0.0000000000000000000000000000000000000000000000000000000000000000004964 229.0
BYDH1_k127_4231297_13 Cupin domain K11312 - - 0.00000000000000000000000000000000000000000000000000000000003443 206.0
BYDH1_k127_4231297_14 - - - - 0.000000000000000000000000000000000000000000000000000001196 194.0
BYDH1_k127_4231297_15 - - - - 0.00000000000000000000000000000000000000000000000002527 189.0
BYDH1_k127_4231297_16 Binds the 23S rRNA K02909 - - 0.0000000000000000000000000000000000000002924 149.0
BYDH1_k127_4231297_18 PFAM Magnesium chelatase, ChlI subunit K07391 - - 0.0000000007151 59.0
BYDH1_k127_4231297_2 Putative peptidoglycan binding domain K21470 - - 1.616e-297 918.0
BYDH1_k127_4231297_3 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 3.026e-270 833.0
BYDH1_k127_4231297_4 PFAM Peptidase M18 K01267 - 3.4.11.21 2.743e-258 798.0
BYDH1_k127_4231297_5 Domain of unknown function (DUF697) - - - 2.475e-248 768.0
BYDH1_k127_4231297_6 Zinc-binding dehydrogenase K12957,K13979 - - 3.984e-216 671.0
BYDH1_k127_4231297_7 Bacterial extracellular solute-binding protein K02012 - - 9.466e-210 653.0
BYDH1_k127_4231297_8 Belongs to the ABC transporter superfamily K02010 - 3.6.3.30 1.301e-206 645.0
BYDH1_k127_4231297_9 Protein of unknown function (DUF3750) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001975 477.0
BYDH1_k127_4266374_0 - - - - 2.093e-235 734.0
BYDH1_k127_4266374_1 Belongs to the pseudouridine synthase RsuA family K06182 - 5.4.99.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009098 324.0
BYDH1_k127_4266374_2 Rhodanese Homology Domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001647 278.0
BYDH1_k127_4266374_4 Peptidase M4 - - - 0.00000000000000000000000000001035 118.0
BYDH1_k127_4406794_0 Glycosyl hydrolase 36 superfamily, catalytic domain - - - 0.0 1168.0
BYDH1_k127_4406794_1 Protein of unknown function, DUF - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009214 343.0
BYDH1_k127_4406794_2 Cytochrome c, class I - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002259 310.0
BYDH1_k127_4406794_3 PFAM transport-associated K04065 - - 0.000000000000000000000000000000000000000000000000009286 181.0
BYDH1_k127_4406794_4 - - - - 0.00000000000000000000000000000000000000000002287 165.0
BYDH1_k127_4406794_5 PFAM NAD-dependent glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.000000000000001501 79.0
BYDH1_k127_4406794_6 PFAM Blue (type 1) copper domain - - - 0.0000000000000102 73.0
BYDH1_k127_4468737_0 Glycosyl transferase family 4 K13007 - - 5.801e-204 636.0
BYDH1_k127_4468737_1 Polysaccharide biosynthesis protein - - - 0.000000000000000000000000000002245 121.0
BYDH1_k127_4482707_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 - 2.7.7.6 0.0 2696.0
BYDH1_k127_4482707_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 - 2.7.7.6 0.0 2640.0
BYDH1_k127_4482707_2 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003491 419.0
BYDH1_k127_4482707_3 Participates in transcription elongation, termination and antitermination K02601 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001532 355.0
BYDH1_k127_4482707_4 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007858 312.0
BYDH1_k127_4482707_5 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000076 279.0
BYDH1_k127_4482707_6 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.0000000000000000000000000000000000000000000000000000000000125 208.0
BYDH1_k127_4482707_7 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation K03073 - - 0.000000000000000000000000000000000000000000000000000000002958 200.0
BYDH1_k127_4482707_8 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.00000000000000005157 80.0
BYDH1_k127_4482707_9 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation K03073 - - 0.000002578 49.0
BYDH1_k127_451331_0 DeoC/LacD family aldolase K11645 - 4.1.2.13 5.881e-224 694.0
BYDH1_k127_451331_1 Sel1-like repeats. K07126 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001245 426.0
BYDH1_k127_451331_2 Ankyrin repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002565 425.0
BYDH1_k127_451331_3 TIGRFAM Ubiquinone biosynthesis hydroxylase, UbiH UbiF VisC COQ6 K03185 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004743 357.0
BYDH1_k127_451331_4 helix_turn_helix, Lux Regulon K07689 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001279 344.0
BYDH1_k127_4515401_0 Neisseria PilC beta-propeller domain K02674 - - 0.0 1507.0
BYDH1_k127_4515401_1 Belongs to the ClpA ClpB family K03694 - - 0.0 1447.0
BYDH1_k127_4515401_10 DAHP synthetase I family K03856 - 2.5.1.54 2.666e-241 746.0
BYDH1_k127_4515401_11 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 3.679e-214 666.0
BYDH1_k127_4515401_12 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 4.969e-211 658.0
BYDH1_k127_4515401_13 TIGRFAM glycine oxidase ThiO K03153 - 1.4.3.19 5.458e-210 655.0
BYDH1_k127_4515401_14 Protein conserved in bacteria - - - 1.943e-205 642.0
BYDH1_k127_4515401_15 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K03527 - 1.17.7.4 1.98e-199 621.0
BYDH1_k127_4515401_16 TYPE 4 fimbrial BIOGENESIS K02672 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001256 538.0
BYDH1_k127_4515401_17 Plays a role in the regulation of phosphate uptake K02039 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005803 452.0
BYDH1_k127_4515401_18 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.7.4.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007856 419.0
BYDH1_k127_4515401_19 Response regulator receiver K15012 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005552 346.0
BYDH1_k127_4515401_2 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 0.0 1285.0
BYDH1_k127_4515401_20 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003701 301.0
BYDH1_k127_4515401_21 type IV pilus modification protein PilV K02671 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000009864 267.0
BYDH1_k127_4515401_22 Ferric uptake regulator family K03711 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000009302 258.0
BYDH1_k127_4515401_23 Modulates RecA activity K03565 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002054 253.0
BYDH1_k127_4515401_24 Type II transport protein GspH K08084 - - 0.00000000000000000000000000000000000000000000000000000000000000000004113 236.0
BYDH1_k127_4515401_25 Pilus assembly protein PilX - - - 0.000000000000000000000000000000000000000000000000000000000000001711 221.0
BYDH1_k127_4515401_26 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation K06891 - - 0.00000000000000000000000000000000000000000000000000000003914 196.0
BYDH1_k127_4515401_27 - - - - 0.000000000000000000000000000000000000000000000000000002857 192.0
BYDH1_k127_4515401_28 Type IV minor pilin ComP, DNA uptake sequence receptor K02655 - - 0.0000000000000000000000000000000000000000000000001227 179.0
BYDH1_k127_4515401_29 PFAM Cold-shock protein, DNA-binding K03704 - - 0.0000000000000000000000000000000000001488 141.0
BYDH1_k127_4515401_3 TonB-dependent Receptor Plug Domain K02014 - - 0.0 1151.0
BYDH1_k127_4515401_30 - - - - 0.000000000000000000000000000000000008748 139.0
BYDH1_k127_4515401_31 COG2801 Transposase and inactivated derivatives K07497 - - 0.0000000000000003815 79.0
BYDH1_k127_4515401_32 Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate K01807 - 5.3.1.6 0.0000000000001116 70.0
BYDH1_k127_4515401_33 PFAM NAD-dependent glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.00003292 49.0
BYDH1_k127_4515401_34 Part of the tripartite ATP-independent periplasmic (TRAP) transport system - - - 0.00003926 48.0
BYDH1_k127_4515401_4 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 2.034e-294 905.0
BYDH1_k127_4515401_5 Putative diguanylate phosphodiesterase - - - 9.715e-289 890.0
BYDH1_k127_4515401_6 Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions K21071 - 2.7.1.11,2.7.1.90 2.06e-275 847.0
BYDH1_k127_4515401_7 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 1.796e-262 810.0
BYDH1_k127_4515401_8 Signal transduction histidine kinase K15011 - 2.7.13.3 3.609e-259 801.0
BYDH1_k127_4515401_9 TIGRFAM isocitrate dehydrogenase, NADP-dependent K00031 GO:0003674,GO:0003824,GO:0003862,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006551,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009098,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.42 7.901e-255 788.0
BYDH1_k127_4526595_0 Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues K01299 - 3.4.17.19 1.07e-228 707.0
BYDH1_k127_4526595_1 Beta-lactamase enzyme family K07262 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001701 403.0
BYDH1_k127_454686_0 Belongs to the 'phage' integrase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001617 464.0
BYDH1_k127_454686_2 Protein of unknown function DUF86 - - - 0.000000000000000000000000000001458 126.0
BYDH1_k127_454686_3 nucleotidyltransferase activity - - - 0.0000000000000006559 81.0
BYDH1_k127_454686_4 DNA polymerase beta domain protein region - - - 0.000004384 53.0
BYDH1_k127_454686_5 Transposase IS200 like - - - 0.0001959 44.0
BYDH1_k127_4554682_0 Outer membrane efflux protein - - - 1.471e-237 743.0
BYDH1_k127_4554682_1 FtsX-like permease family K02004 - - 6.778e-208 650.0
BYDH1_k127_4554682_10 ubiquitin - - - 0.00000000000000009077 83.0
BYDH1_k127_4554682_11 PFAM Transposase, IS4-like K07481 - - 0.0000000000001942 72.0
BYDH1_k127_4554682_12 addiction module killer protein - - - 0.00000002786 55.0
BYDH1_k127_4554682_13 addiction module killer protein - - - 0.00002656 46.0
BYDH1_k127_4554682_2 Biotin-lipoyl like K02005 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001253 568.0
BYDH1_k127_4554682_3 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000479 414.0
BYDH1_k127_4554682_4 pilus organization - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005669 302.0
BYDH1_k127_4554682_5 MafB19-like deaminase K01485 - 3.5.4.1 0.0000000000000000000000000000000000000000000000000000000000000000001298 232.0
BYDH1_k127_4554682_6 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000002018 180.0
BYDH1_k127_4554682_7 Fungal family of unknown function (DUF1776) - - - 0.0000000000000000000000000000000000000000003734 157.0
BYDH1_k127_4554682_8 type I site-specific restriction-modification system, R subunit K01153 - 3.1.21.3 0.0000000000000000000000000000000000183 136.0
BYDH1_k127_4554682_9 GYD domain - - - 0.00000000000000000000000000000004376 127.0
BYDH1_k127_4592042_0 Uncharacterized protein conserved in bacteria (DUF2130) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002015 540.0
BYDH1_k127_4592042_1 Transposase IS116/IS110/IS902 family - - - 0.000000000000000000000000000000000000008764 148.0
BYDH1_k127_4592042_2 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate - - - 0.000000000000000000000000000000000000009178 145.0
BYDH1_k127_4592042_3 PFAM Transposase IS3 IS911 K07483 - - 0.0000000000000000000000000000000000002706 141.0
BYDH1_k127_4592042_4 - - - - 0.0000000000000000000001531 102.0
BYDH1_k127_4592042_5 Protein of unknown function DUF45 K07043 - - 0.0000000000000000001219 93.0
BYDH1_k127_4592042_6 PFAM NAD-dependent glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.00004517 49.0
BYDH1_k127_4646357_0 HELICc2 K03722 - 3.6.4.12 0.0 1223.0
BYDH1_k127_4646357_1 DNA helicase K03654 - 3.6.4.12 0.0 1144.0
BYDH1_k127_4646357_10 nuclear chromosome segregation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005068 391.0
BYDH1_k127_4646357_11 Polyketide cyclase / dehydrase and lipid transport - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004699 311.0
BYDH1_k127_4646357_12 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005461 327.0
BYDH1_k127_4646357_13 Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene K03664 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001176 290.0
BYDH1_k127_4646357_14 Domain of unknown function (DUF4124) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002859 254.0
BYDH1_k127_4646357_15 - - - - 0.0000000000000000000000000000000000000000000000000000000000000518 216.0
BYDH1_k127_4646357_16 This protein binds to 23S rRNA in the presence of protein L20 K02888 - - 0.00000000000000000000000000000000000000000000000000000002813 199.0
BYDH1_k127_4646357_17 Belongs to the bacterial ribosomal protein bL27 family K02899 - - 0.00000000000000000000000000000000000000000000003987 169.0
BYDH1_k127_4646357_18 Belongs to the UPF0125 (RnfH) family K09801 - - 0.00000000000000000000000000000000000000000001072 164.0
BYDH1_k127_4646357_19 nuclear chromosome segregation - - - 0.000000000000000000000000000000000000000001338 164.0
BYDH1_k127_4646357_2 Signal transduction histidine kinase, subgroup 1, dimerisation phosphoacceptor K02668 - 2.7.13.3 0.0 998.0
BYDH1_k127_4646357_20 - K06950 - - 0.00000000000000000000000000000000000000649 145.0
BYDH1_k127_4646357_21 - - - - 0.000000000000000000000000000000008453 126.0
BYDH1_k127_4646357_22 Transposase DDE domain - - - 0.0000000000008772 67.0
BYDH1_k127_4646357_3 TIGRFAM glutamine synthetase, type I K01915,K20712 GO:0003674,GO:0003824,GO:0006725,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0016866,GO:0034022,GO:0042537,GO:0044237,GO:0050486,GO:0071704,GO:1901360 5.4.4.3,6.3.1.2 1.877e-313 960.0
BYDH1_k127_4646357_4 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate K00931 - 2.7.2.11 6.905e-224 695.0
BYDH1_k127_4646357_5 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 2.889e-218 678.0
BYDH1_k127_4646357_6 Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group K02259 - - 7.829e-209 650.0
BYDH1_k127_4646357_7 Belongs to the FPP GGPP synthase family K02523 - 2.5.1.90 2.706e-195 610.0
BYDH1_k127_4646357_8 Exodeoxyribonuclease III xth K01142 - 3.1.11.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001644 494.0
BYDH1_k127_4646357_9 response regulator receiver K02667 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005928 456.0
BYDH1_k127_4708938_0 COG1629 Outer membrane receptor proteins, mostly Fe transport K02014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002179 579.0
BYDH1_k127_4708938_1 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004866 295.0
BYDH1_k127_4708938_2 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses - - - 0.00000000000000000000000000000000000000000000000000006323 196.0
BYDH1_k127_4751665_0 M3B, thimet oligopeptidase F K01414 - 3.4.24.70 0.0 1343.0
BYDH1_k127_4751665_1 Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC - - - 1.181e-273 842.0
BYDH1_k127_4751665_10 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K00058 - 1.1.1.399,1.1.1.95 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004325 569.0
BYDH1_k127_4751665_11 O-Antigen ligase K02847 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002543 541.0
BYDH1_k127_4751665_12 Belongs to the RNA methyltransferase TrmD family K00554 - 2.1.1.228 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000508 516.0
BYDH1_k127_4751665_13 Methyltransferase FkbM domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009743 511.0
BYDH1_k127_4751665_14 HpcH/HpaI aldolase/citrate lyase family K01630 - 4.1.2.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004093 501.0
BYDH1_k127_4751665_15 Cytidylyltransferase K00979 - 2.7.7.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005619 484.0
BYDH1_k127_4751665_16 Peptidyl-prolyl cis-trans isomerase K03769 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001345 485.0
BYDH1_k127_4751665_17 MlaA lipoprotein K04754 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001882 481.0
BYDH1_k127_4751665_18 Glycosyltransferase Family 4 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003096 437.0
BYDH1_k127_4751665_19 Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol K06134 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000026 408.0
BYDH1_k127_4751665_2 Dihydroorotase, multifunctional complex type K01465 - 3.5.2.3 6.908e-272 838.0
BYDH1_k127_4751665_20 Haloacid dehalogenase-like hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004525 398.0
BYDH1_k127_4751665_21 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase K01057 - 3.1.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001425 392.0
BYDH1_k127_4751665_22 Belongs to the UPF0301 (AlgH) family K07735 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001 359.0
BYDH1_k127_4751665_23 probably involved in intracellular septation K06190 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007746 357.0
BYDH1_k127_4751665_24 invasion associated locus B - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001617 336.0
BYDH1_k127_4751665_25 Phosphoribosyl transferase domain K02825 - 2.4.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001112 325.0
BYDH1_k127_4751665_26 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002035 320.0
BYDH1_k127_4751665_27 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002967 245.0
BYDH1_k127_4751665_28 Belongs to the ArsC family K00537 - 1.20.4.1 0.00000000000000000000000000000000000000000000000000000000000002156 216.0
BYDH1_k127_4751665_29 Hydantoinase B/oxoprolinase K01469 - 3.5.2.9 0.00000000000000000000000000000000000000000000000000000000007829 205.0
BYDH1_k127_4751665_3 Cysteine-rich domain K11473 - - 8.193e-264 815.0
BYDH1_k127_4751665_30 YCII-related domain K09780 - - 0.0000000000000000000000000000000000000000000000002363 177.0
BYDH1_k127_4751665_31 Domain of unknown function (DUF2024) - - - 0.000000000000000000000000000000000000000000000002501 173.0
BYDH1_k127_4751665_32 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 - - 0.00000000000000000000000000000000000000000000005349 173.0
BYDH1_k127_4751665_33 Belongs to the bacterial ribosomal protein bS16 family K02959 - - 0.0000000000000000000000000000000000000000000001447 170.0
BYDH1_k127_4751665_35 Rubredoxin - - - 0.0000000000000008113 77.0
BYDH1_k127_4751665_36 hmm pf01609 - - - 0.000000001584 62.0
BYDH1_k127_4751665_37 PFAM transposase, IS4 family protein K07481 - - 0.0006972 44.0
BYDH1_k127_4751665_4 PFAM Major facilitator superfamily - - - 6.534e-254 786.0
BYDH1_k127_4751665_5 Pyridine nucleotide-disulphide oxidoreductase K05297,K12265 - 1.18.1.1 1.717e-222 692.0
BYDH1_k127_4751665_6 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 4.185e-222 691.0
BYDH1_k127_4751665_7 Belongs to the ATCase OTCase family K00609 - 2.1.3.2 3.321e-200 624.0
BYDH1_k127_4751665_8 PFAM NAD-dependent epimerase dehydratase K01784 - 5.1.3.2 7.32e-199 620.0
BYDH1_k127_4751665_9 PFAM Glycosyl transferase, family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001273 607.0
BYDH1_k127_4785599_0 AcrB/AcrD/AcrF family K03296,K18138 - - 0.0 1889.0
BYDH1_k127_4785599_1 Belongs to the peptidase S16 family - - - 0.0 1505.0
BYDH1_k127_4785599_10 Transcriptional regulatory protein, C terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002348 268.0
BYDH1_k127_4785599_11 Universal stress protein family - - - 0.00000000000000000000000000000000003556 139.0
BYDH1_k127_4785599_2 PFAM Multicopper oxidase, type - - - 0.0 1114.0
BYDH1_k127_4785599_3 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735,K13829 - 2.7.1.71,4.2.3.4 0.0 1071.0
BYDH1_k127_4785599_4 Signal transduction histidine kinase, subgroup 1, dimerisation phosphoacceptor - - - 4.085e-247 766.0
BYDH1_k127_4785599_5 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 - 4.1.1.37 1.418e-231 717.0
BYDH1_k127_4785599_6 Sulfate permease family - - - 6.003e-209 659.0
BYDH1_k127_4785599_7 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585,K18094 - - 4.296e-206 647.0
BYDH1_k127_4785599_8 PFAM multicopper oxidase type 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007647 597.0
BYDH1_k127_4785599_9 Belongs to the dGTPase family. Type 2 subfamily K01129 - 3.1.5.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004952 505.0
BYDH1_k127_4854746_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.0 1842.0
BYDH1_k127_4854746_1 Diguanylate cyclase phosphodiesterase with PAS PAC - - - 0.0 1816.0
BYDH1_k127_4854746_10 Glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001911 606.0
BYDH1_k127_4854746_11 PFAM histone deacetylase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000318 595.0
BYDH1_k127_4854746_12 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000107 585.0
BYDH1_k127_4854746_13 Enoyl- acyl-carrier-protein reductase NADH K00208 - 1.3.1.10,1.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003149 514.0
BYDH1_k127_4854746_14 Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily K01834 - 5.4.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001487 486.0
BYDH1_k127_4854746_15 UBA THIF-type NAD FAD binding K21029 - 2.7.7.80 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006911 444.0
BYDH1_k127_4854746_16 Belongs to the class I-like SAM-binding methyltransferase superfamily. TPMT family K00569 - 2.1.1.67 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002734 414.0
BYDH1_k127_4854746_17 Bacterial regulatory proteins, tetR family K05501 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006912 363.0
BYDH1_k127_4854746_18 PFAM thioesterase superfamily K19222 - 3.1.2.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005434 323.0
BYDH1_k127_4854746_19 Biotin lipoyl attachment K01941 - 6.3.4.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007603 315.0
BYDH1_k127_4854746_2 CoA binding domain K09181 - - 0.0 1710.0
BYDH1_k127_4854746_20 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001783 314.0
BYDH1_k127_4854746_21 Bacterial SH3 domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004915 301.0
BYDH1_k127_4854746_22 One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA K03071 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001057 282.0
BYDH1_k127_4854746_23 Rhodanese Homology Domain K01011 - 2.8.1.1,2.8.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001836 273.0
BYDH1_k127_4854746_24 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003255 269.0
BYDH1_k127_4854746_25 Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins K03676 - - 0.000000000000000000000000000000000000000000000003173 172.0
BYDH1_k127_4854746_26 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.00000000000000000000000000000000000000000004765 161.0
BYDH1_k127_4854746_27 - - - - 0.000000000000000000000006149 102.0
BYDH1_k127_4854746_29 - - - - 0.0000000001061 62.0
BYDH1_k127_4854746_3 extracellular solute-binding protein, family 5 - - - 0.0 1422.0
BYDH1_k127_4854746_30 - - - - 0.000008247 51.0
BYDH1_k127_4854746_4 Peptidyl-prolyl cis-trans isomerase K03770 - 5.2.1.8 0.0 1138.0
BYDH1_k127_4854746_5 Belongs to the peptidase S41A family K03797 - 3.4.21.102 4.228e-293 902.0
BYDH1_k127_4854746_6 L-serine dehydratase single chain form K01752 - 4.3.1.17 9.198e-292 897.0
BYDH1_k127_4854746_7 Protein of unknown function (DUF3422) - - - 1.363e-274 847.0
BYDH1_k127_4854746_8 Peptidase family M23 - - - 3.254e-225 702.0
BYDH1_k127_4854746_9 PFAM binding-protein-dependent transport systems inner membrane component K02033 - - 3.441e-197 616.0
BYDH1_k127_4871770_0 protein synthesis factor, GTP-binding K06207 - - 0.0 1189.0
BYDH1_k127_4871770_1 WD40-like Beta Propeller Repeat - - - 1.062e-232 721.0
BYDH1_k127_4871770_2 Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps K04084 - 1.8.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000001535 257.0
BYDH1_k127_4871770_3 domain, Protein K00703,K07082 - 2.4.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000227 256.0
BYDH1_k127_4871770_4 divalent ion tolerance protein K03926 GO:0003674,GO:0005488,GO:0005507,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0043167,GO:0043169,GO:0044424,GO:0044464,GO:0046872,GO:0046914 - 0.000000000000000000000000000000000000000000000000000000000000000573 219.0
BYDH1_k127_4871770_5 - - - - 0.000000000000000000000000000001647 123.0
BYDH1_k127_4871770_6 PFAM Restriction endonuclease, type I, R subunit Type III, Res subunit K01156 - 3.1.21.5 0.000000000000000000000000006179 111.0
BYDH1_k127_4871770_7 helicase activity K07316 - 2.1.1.72 0.0007497 46.0
BYDH1_k127_4907899_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.0 1742.0
BYDH1_k127_4907899_1 Biotin-lipoyl like K01993,K16922 - - 0.0 1483.0
BYDH1_k127_4907899_10 Acyl-CoA dehydrogenase, C-terminal domain - - - 1.446e-221 691.0
BYDH1_k127_4907899_11 Belongs to the GcvT family K06980 - - 4.615e-213 664.0
BYDH1_k127_4907899_12 cysteine protease - - - 1.773e-196 615.0
BYDH1_k127_4907899_13 Belongs to the pseudomonas-type ThrB family K02204 - 2.7.1.39 6.796e-194 606.0
BYDH1_k127_4907899_14 Uncharacterized conserved protein (DUF2278) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006341 597.0
BYDH1_k127_4907899_15 PFAM Phosphoribulokinase uridine kinase K00855 - 2.7.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003365 571.0
BYDH1_k127_4907899_16 ABC transporter, phosphonate, periplasmic substrate-binding protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008686 554.0
BYDH1_k127_4907899_17 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005547 520.0
BYDH1_k127_4907899_18 Cytokinin riboside 5'-monophosphate phosphoribohydrolase K06966 - 3.2.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002493 484.0
BYDH1_k127_4907899_19 Protein of unknown function (DUF502) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007548 460.0
BYDH1_k127_4907899_2 Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs K08300 - 3.1.26.12 0.0 1444.0
BYDH1_k127_4907899_20 transposition K07497 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002036 436.0
BYDH1_k127_4907899_21 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004883 318.0
BYDH1_k127_4907899_22 Glycine-zipper domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001545 297.0
BYDH1_k127_4907899_23 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005933 263.0
BYDH1_k127_4907899_24 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001148 259.0
BYDH1_k127_4907899_25 - K19168 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000009323 253.0
BYDH1_k127_4907899_26 Protein of unknown function (DUF2782) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000008393 247.0
BYDH1_k127_4907899_27 - - - - 0.00000000000000000000000000000000000000000000000000000000000003404 216.0
BYDH1_k127_4907899_28 - - - - 0.0000000000000000000000000000000000000000000000000000000003344 204.0
BYDH1_k127_4907899_3 UvrD REP K03657 - 3.6.4.12 0.0 1390.0
BYDH1_k127_4907899_30 Transposase - - - 0.000000000000000000000000000000000000000000000009283 172.0
BYDH1_k127_4907899_31 glycerol-3-phosphate dehydrogenase [NAD(P)+] activity K00057 - 1.1.1.94 0.000000001964 59.0
BYDH1_k127_4907899_32 ABC-2 family transporter protein - - - 0.0000007159 52.0
BYDH1_k127_4907899_4 Alpha amylase, catalytic domain K01176 - 3.2.1.1 0.0 1313.0
BYDH1_k127_4907899_5 Dynamin family - - - 3.55e-305 937.0
BYDH1_k127_4907899_6 Outer membrane efflux protein K18139 - - 8.261e-288 886.0
BYDH1_k127_4907899_7 Bacterial protein of unknown function (DUF839) K07093 - - 1.244e-262 813.0
BYDH1_k127_4907899_8 amine dehydrogenase activity - - - 6.327e-250 792.0
BYDH1_k127_4907899_9 Belongs to the sulfur carrier protein TusA family - - - 1.867e-236 734.0
BYDH1_k127_4940888_0 DNA polymerase X family K02347 - - 0.0 1115.0
BYDH1_k127_4940888_1 tRNA-splicing ligase RtcB K14415 - 6.5.1.3 5.517e-308 945.0
BYDH1_k127_4940888_10 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000197 292.0
BYDH1_k127_4940888_11 Archease protein family (MTH1598/TM1083) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001425 271.0
BYDH1_k127_4940888_2 Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP K00763 - 6.3.4.21 5.235e-238 737.0
BYDH1_k127_4940888_3 PFAM Copper resistance D K07245 - - 3.891e-225 702.0
BYDH1_k127_4940888_4 Specifically methylates the adenine in position 2030 of 23S rRNA K07115 - 2.1.1.266 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001086 566.0
BYDH1_k127_4940888_5 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005885 440.0
BYDH1_k127_4940888_6 Phosphoribosyl transferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000521 416.0
BYDH1_k127_4940888_7 Sigma 54 modulation protein / S30EA ribosomal protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001208 367.0
BYDH1_k127_4940888_8 Isochorismatase family K08281 - 3.5.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005545 366.0
BYDH1_k127_4940888_9 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003628 312.0
BYDH1_k127_5113680_0 PFAM Magnesium chelatase, ChlI subunit K07391 - - 2.004e-297 917.0
BYDH1_k127_5113680_1 Sodium:alanine symporter family K03310 - - 3.146e-291 896.0
BYDH1_k127_5113680_10 - - - - 0.00000000000000000000000000000000000000000000000000000000000003567 216.0
BYDH1_k127_5113680_11 Membrane fusogenic activity K09806 - - 0.00000000000000000000000000000000000000000000374 166.0
BYDH1_k127_5113680_12 - K07039 - - 0.0000000000000000000000000000000000008106 139.0
BYDH1_k127_5113680_13 ThiS family K03154 - - 0.00000000000000000000000000000000001296 136.0
BYDH1_k127_5113680_14 PFAM transposase, IS4 family protein - - - 0.000000000000000000000000000006247 119.0
BYDH1_k127_5113680_15 Permease MlaE K02066 - - 0.000000000000000000000003595 103.0
BYDH1_k127_5113680_17 Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA K03439 - 2.1.1.33 0.000000000001713 70.0
BYDH1_k127_5113680_18 - - - - 0.000000276 54.0
BYDH1_k127_5113680_19 DNA-binding transcription factor activity K10680 - - 0.000006704 49.0
BYDH1_k127_5113680_2 peptidase M24B, X-Pro dipeptidase aminopeptidase K01262 - 3.4.11.9 1.309e-278 859.0
BYDH1_k127_5113680_3 Phosphotransferase enzyme family K07102 - 2.7.1.221 2.259e-207 646.0
BYDH1_k127_5113680_4 amine dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003935 591.0
BYDH1_k127_5113680_5 ABC transporter K02065 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009727 533.0
BYDH1_k127_5113680_6 nuclease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002431 527.0
BYDH1_k127_5113680_7 Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S K03149 - 2.8.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001651 501.0
BYDH1_k127_5113680_8 Nucleotidyl transferase K00992 - 2.7.7.99 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000159 434.0
BYDH1_k127_5113680_9 Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA K03439 - 2.1.1.33 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001277 398.0
BYDH1_k127_5157959_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00283 - 1.4.4.2 4.87e-318 974.0
BYDH1_k127_5157959_1 pfkB family carbohydrate kinase K00852,K00856 - 2.7.1.15,2.7.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001503 295.0
BYDH1_k127_5157959_2 Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides K11065 - 1.11.1.15 0.000000000000000000000000000000000000000000000000000001016 192.0
BYDH1_k127_5161613_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 0.0 1751.0
BYDH1_k127_5161613_1 3-hydroxyacyl-CoA dehydrogenase K07516 - 1.1.1.35 0.0 1654.0
BYDH1_k127_5161613_10 Belongs to the bacterial glucokinase family K00845 - 2.7.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005472 599.0
BYDH1_k127_5161613_11 E3 Ubiquitin ligase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005296 574.0
BYDH1_k127_5161613_12 TIGRFAM Polyphosphate nucleotide phosphotransferase, PPK2 K00937 - 2.7.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005404 471.0
BYDH1_k127_5161613_13 PFAM Peptidase M48 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001625 458.0
BYDH1_k127_5161613_14 SMART HTH transcriptional regulator, Crp K10914 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002747 406.0
BYDH1_k127_5161613_15 LemA family K03744 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002198 366.0
BYDH1_k127_5161613_17 cytochrome - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000229 281.0
BYDH1_k127_5161613_18 Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane K03643 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001506 275.0
BYDH1_k127_5161613_19 PFAM Glyoxalase bleomycin resistance protein dioxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001136 253.0
BYDH1_k127_5161613_2 PFAM glycosyl transferase, family 35 K00688 - 2.4.1.1 0.0 1438.0
BYDH1_k127_5161613_20 ArsC family K00537 - 1.20.4.1 0.00000000000000000000000000000000000000000000000000000000000000003222 224.0
BYDH1_k127_5161613_21 AraC-like ligand binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000001365 221.0
BYDH1_k127_5161613_22 Domain of unknown function (DUF4156) - - - 0.000000000000000000000000000000000000000000000000000000000000007101 218.0
BYDH1_k127_5161613_23 - - - - 0.00000000000000000000000000000000000000000000000000000000000001594 216.0
BYDH1_k127_5161613_25 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.0000000000000000000000000000000000000000000001048 179.0
BYDH1_k127_5161613_26 Dodecin K09165 - - 0.00000000000000000000000000000000004084 134.0
BYDH1_k127_5161613_27 Protein of unknown function (DUF3622) - - - 0.00000000000000000000000000001736 119.0
BYDH1_k127_5161613_28 manually curated - - - 0.00000000000003256 73.0
BYDH1_k127_5161613_29 - - - - 0.0000000000001675 72.0
BYDH1_k127_5161613_3 Putative diguanylate phosphodiesterase K21023 - 2.7.7.65 0.0 1035.0
BYDH1_k127_5161613_30 - - - - 0.0009642 46.0
BYDH1_k127_5161613_4 Bacterial protein of unknown function (DUF853) K06915 - - 1.008e-275 850.0
BYDH1_k127_5161613_5 Metal-dependent hydrolase HDOD - - - 1.368e-262 813.0
BYDH1_k127_5161613_6 CHAD - - - 2.321e-260 809.0
BYDH1_k127_5161613_7 Belongs to the thiolase family K00632 - 2.3.1.16 2.881e-249 771.0
BYDH1_k127_5161613_8 Belongs to the UPF0176 family K07146 - - 1.226e-195 610.0
BYDH1_k127_5161613_9 DNA polymerase III (Delta subunit) K02340 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006148 605.0
BYDH1_k127_5216174_0 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004032 565.0
BYDH1_k127_5216174_1 Belongs to the IlvD Edd family K01687 - 4.2.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000107 471.0
BYDH1_k127_5232996_0 Signal transduction histidine kinase, subgroup 1, dimerisation phosphoacceptor - - - 0.0 1173.0
BYDH1_k127_5232996_1 SMART Signal transduction response regulator, receiver - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000244 382.0
BYDH1_k127_5232996_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001816 379.0
BYDH1_k127_5232996_3 Protein of unknown function DUF86 - - - 0.00000000000000000000000000000000000000000000000000000000000000000001109 236.0
BYDH1_k127_5232996_4 Putative motility protein - - - 0.000000000000000000000000000003225 122.0
BYDH1_k127_5232996_5 Nucleotidyltransferase domain - - - 0.0000000000000000000000008072 104.0
BYDH1_k127_5232996_6 PFAM Ammonia monooxygenase particulate methane monooxygenase, subunit C K10946 - - 0.0000000000000000007393 86.0
BYDH1_k127_5235786_0 Signal transduction histidine kinase, phosphotransfer (Hpt) - - - 0.0 1022.0
BYDH1_k127_5235786_1 7 transmembrane helices usually fused to an inactive transglutaminase - - - 2.149e-306 942.0
BYDH1_k127_5235786_2 Sugar-transfer associated ATP-grasp - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002172 497.0
BYDH1_k127_5235786_3 Putative ATP-dependant zinc protease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006628 457.0
BYDH1_k127_5235786_4 - - - - 0.00000000000000000000000000000000000000001297 153.0
BYDH1_k127_5242049_0 Required for chromosome condensation and partitioning K03529 - - 0.0 1875.0
BYDH1_k127_5242049_1 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 0.0 1173.0
BYDH1_k127_5242049_10 Belongs to the dCTP deaminase family K01494 - 3.5.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002602 400.0
BYDH1_k127_5242049_11 phosphatase activity K01560,K07025,K20866,K21063 GO:0003674,GO:0003824,GO:0006766,GO:0006767,GO:0006771,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042578,GO:0042726,GO:0042727,GO:0043726,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 3.1.3.10,3.1.3.104,3.8.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001699 382.0
BYDH1_k127_5242049_12 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis K00287 - 1.5.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002397 319.0
BYDH1_k127_5242049_13 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) K09457 - 1.7.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003265 282.0
BYDH1_k127_5242049_14 Iron-binding zinc finger CDGSH type - - - 0.0000000000000000000000000000000000000000000000001058 177.0
BYDH1_k127_5242049_15 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.000000000000000000000000000000000000000000000002162 174.0
BYDH1_k127_5242049_2 PFAM Peptidase M17, leucyl aminopeptidase K01255 - 3.4.11.1 7.128e-302 927.0
BYDH1_k127_5242049_3 Lysin motif K08307 - - 1.108e-258 799.0
BYDH1_k127_5242049_4 Belongs to the Orn Lys Arg decarboxylase class-II family K01581 - 4.1.1.17 1.245e-256 791.0
BYDH1_k127_5242049_5 TIGRFAM TIGR03790 family protein - - - 1.28e-241 754.0
BYDH1_k127_5242049_6 Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins - - - 2.043e-237 736.0
BYDH1_k127_5242049_7 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 3.558e-222 692.0
BYDH1_k127_5242049_8 PFAM Integrase catalytic region - - - 5.498e-217 676.0
BYDH1_k127_5242049_9 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis K00560 - 2.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001452 525.0
BYDH1_k127_53514_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.0 1185.0
BYDH1_k127_53514_1 TRAP transporter T-component - - - 0.00000000000000000000001799 103.0
BYDH1_k127_5393257_0 Multicopper oxidase type - - - 0.0 1514.0
BYDH1_k127_5393257_1 ABC transporter C-terminal domain K15738 - - 0.0 1217.0
BYDH1_k127_5393257_10 Domain of unknown function (DUF1841) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007034 276.0
BYDH1_k127_5393257_11 Multicopper oxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002421 278.0
BYDH1_k127_5393257_12 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000163 269.0
BYDH1_k127_5393257_13 PFAM Cytochrome c, class I - - - 0.000000000000000000000000000000000000000000000000000000000002908 209.0
BYDH1_k127_5393257_14 Cytochrome c, class I - - - 0.000000000000000000000000000000000000000000000000000000000007877 207.0
BYDH1_k127_5393257_15 PFAM transposase, IS4 family protein - - - 0.0000000000000000000000000000000000002367 148.0
BYDH1_k127_5393257_16 PFAM transposase, IS4 family protein - - - 0.000000000000000000000000006322 113.0
BYDH1_k127_5393257_17 PFAM transposase, IS4 family protein - - - 0.00000000000003762 77.0
BYDH1_k127_5393257_2 Multicopper oxidase type - - - 0.0 1106.0
BYDH1_k127_5393257_3 Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor K00254 - 1.3.5.2 3.692e-206 644.0
BYDH1_k127_5393257_4 FtsZ-dependent cytokinesis - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001025 533.0
BYDH1_k127_5393257_5 May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate K21420 - 2.3.2.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006985 466.0
BYDH1_k127_5393257_6 Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine K00684 - 2.3.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005272 449.0
BYDH1_k127_5393257_7 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002917 410.0
BYDH1_k127_5393257_8 Part of a membrane complex involved in electron transport K03616 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003327 411.0
BYDH1_k127_5393257_9 Multicopper oxidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003837 311.0
BYDH1_k127_542072_0 membrane transporter protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002909 480.0
BYDH1_k127_542072_1 COG0526, thiol-disulfide isomerase and thioredoxins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002684 420.0
BYDH1_k127_542072_2 EVE domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003289 283.0
BYDH1_k127_542072_3 ParD-like antitoxin of type II bacterial toxin-antitoxin system - - - 0.000000000000000000001409 94.0
BYDH1_k127_542072_4 ParE-like toxin of type II bacterial toxin-antitoxin system - - - 0.00000000000003656 73.0
BYDH1_k127_542072_5 ParE-like toxin of type II bacterial toxin-antitoxin system - - - 0.0000000000512 65.0
BYDH1_k127_5487071_0 Diguanylate cyclase phosphodiesterase with PAS PAC - - - 0.0 1705.0
BYDH1_k127_5487071_1 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 0.0 1461.0
BYDH1_k127_5487071_10 Thiol disulfide interchange protein K03673 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004894 392.0
BYDH1_k127_5487071_11 Essential for recycling GMP and indirectly, cGMP K00942 - 2.7.4.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004181 384.0
BYDH1_k127_5487071_12 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002739 304.0
BYDH1_k127_5487071_13 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA K01520 - 3.6.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001837 291.0
BYDH1_k127_5487071_14 Uncharacterized ACR, COG1430 K09005 - - 0.00000000000000000000000000000000000000000000000006002 181.0
BYDH1_k127_5487071_15 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 - 2.7.7.6 0.000000000000000000000000000000000006109 137.0
BYDH1_k127_5487071_2 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K01139 - 2.7.6.5,3.1.7.2 0.0 1344.0
BYDH1_k127_5487071_3 Arginyl-tRNA synthetase K01887 - 6.1.1.19 0.0 1129.0
BYDH1_k127_5487071_4 PFAM Metal-dependent hydrolase HDOD - - - 8.59e-298 919.0
BYDH1_k127_5487071_5 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03106 - 3.6.5.4 1.036e-269 832.0
BYDH1_k127_5487071_6 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 1.493e-225 702.0
BYDH1_k127_5487071_7 PFAM Cytochrome c assembly protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004033 545.0
BYDH1_k127_5487071_8 Specifically methylates the ribose of guanosine 2251 in 23S rRNA K03218 - 2.1.1.185 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002106 469.0
BYDH1_k127_5487071_9 Sporulation related domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001529 434.0
BYDH1_k127_5522782_0 Molybdopterin oxidoreductase Fe4S4 domain K00336 - 1.6.5.3 0.0 1480.0
BYDH1_k127_5522782_1 chain 5 L K00341 - 1.6.5.3 0.0 1234.0
BYDH1_k127_5522782_10 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003392 575.0
BYDH1_k127_5522782_11 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002188 504.0
BYDH1_k127_5522782_12 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008872 458.0
BYDH1_k127_5522782_13 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000143 388.0
BYDH1_k127_5522782_14 Belongs to the complex I subunit 6 family K00339 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001844 361.0
BYDH1_k127_5522782_15 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003362 338.0
BYDH1_k127_5522782_16 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001973 336.0
BYDH1_k127_5522782_17 Thioredoxin-like [2Fe-2S] ferredoxin K00334 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001316 316.0
BYDH1_k127_5522782_18 Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein K03611 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000192 288.0
BYDH1_k127_5522782_19 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000002201 235.0
BYDH1_k127_5522782_2 Molecular chaperone. Has ATPase activity K04079 - - 0.0 1173.0
BYDH1_k127_5522782_20 Preprotein translocase SecG subunit K03075 - - 0.00000000000000000000000000000000000000000000000000000002784 198.0
BYDH1_k127_5522782_22 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 - 1.6.5.3 0.0000000000000000000000000000000000000000000000001058 178.0
BYDH1_k127_5522782_23 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated K00567 - 2.1.1.63 0.000000000000000000003298 99.0
BYDH1_k127_5522782_24 BNR repeat-like domain - - - 0.0002646 46.0
BYDH1_k127_5522782_3 NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 4.704e-311 954.0
BYDH1_k127_5522782_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 - 1.6.5.3 2.263e-293 899.0
BYDH1_k127_5522782_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 2.029e-287 885.0
BYDH1_k127_5522782_6 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 5.665e-280 860.0
BYDH1_k127_5522782_7 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 3.812e-226 703.0
BYDH1_k127_5522782_8 Phosphate transport system permease protein K02038 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001508 579.0
BYDH1_k127_5522782_9 Tyrosine recombinase XerD K04763 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006894 576.0
BYDH1_k127_5524007_0 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 - 6.1.1.20 0.0 1420.0
BYDH1_k127_5524007_1 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 0.0 1253.0
BYDH1_k127_5524007_10 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001847 341.0
BYDH1_k127_5524007_11 helix_turn_helix, mercury resistance - - - 0.000000000000000000000000000000000000000000000000000000000000000000007015 235.0
BYDH1_k127_5524007_12 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 - - 0.000000000000000000000000000000000000000000000000000000000000000003148 226.0
BYDH1_k127_5524007_13 Small metal-binding protein - - - 0.000000000000000000000000000000000000000000000000001484 185.0
BYDH1_k127_5524007_14 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K04764 - - 0.0000000000000000000000000000000000000000000002482 168.0
BYDH1_k127_5524007_15 Belongs to the bacterial ribosomal protein bL35 family K02916 - - 0.0000000000000000000000000000005404 122.0
BYDH1_k127_5524007_2 Threonine synthase K01733 - 4.2.3.1 1.888e-272 840.0
BYDH1_k127_5524007_3 PFAM aminotransferase, class I K14260 - 2.6.1.2,2.6.1.66 1.904e-270 833.0
BYDH1_k127_5524007_4 homoserine dehydrogenase K00003 - 1.1.1.3 3.637e-259 801.0
BYDH1_k127_5524007_5 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 - 6.1.1.20 6.441e-220 682.0
BYDH1_k127_5524007_6 Lysin motif K06194 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001166 605.0
BYDH1_k127_5524007_7 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001528 506.0
BYDH1_k127_5524007_8 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001713 474.0
BYDH1_k127_5524007_9 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005048 404.0
BYDH1_k127_5525057_0 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase - - - 0.0 2294.0
BYDH1_k127_5525057_1 Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate K00381,K00392 - 1.8.1.2,1.8.7.1 0.0 1162.0
BYDH1_k127_5525057_10 Belongs to the MtfA family K09933 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001738 518.0
BYDH1_k127_5525057_11 Reduction of activated sulfate into sulfite K00390 - 1.8.4.10,1.8.4.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004285 494.0
BYDH1_k127_5525057_12 Uncharacterized ACR, YdiU/UPF0061 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002245 476.0
BYDH1_k127_5525057_13 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005167 347.0
BYDH1_k127_5525057_14 Predicted small integral membrane protein (DUF2165) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001932 310.0
BYDH1_k127_5525057_15 Bacterial protein of unknown function (DUF934) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003087 275.0
BYDH1_k127_5525057_16 Haem-degrading - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007538 261.0
BYDH1_k127_5525057_17 Protein of unknown function (DUF3293) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000009511 249.0
BYDH1_k127_5525057_18 HAD-hyrolase-like - - - 0.00000000000000000000000000000000000000000000000000000000021 203.0
BYDH1_k127_5525057_19 4TM region of pyridine nucleotide transhydrogenase, mitoch K00322,K00324 - 1.6.1.1,1.6.1.2 0.0000000000000000000000000000000000000000000000000000000023 201.0
BYDH1_k127_5525057_2 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 3.008e-289 889.0
BYDH1_k127_5525057_20 - - - - 0.000000000000000000000000000000000000000000004228 163.0
BYDH1_k127_5525057_22 - - - - 0.0000000000000000000000002681 105.0
BYDH1_k127_5525057_24 nucleotide-binding Protein - - - 0.000000000001937 69.0
BYDH1_k127_5525057_25 TIR domain - - - 0.000006107 49.0
BYDH1_k127_5525057_3 Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN NodQ subfamily K00955,K00956 - 2.7.1.25,2.7.7.4 2.968e-270 832.0
BYDH1_k127_5525057_4 PFAM Alanine dehydrogenase PNT K00324 - 1.6.1.2 2.008e-224 698.0
BYDH1_k127_5525057_5 Bacterial regulatory helix-turn-helix protein, lysR family K13634 - - 2.869e-202 631.0
BYDH1_k127_5525057_6 Bacterial transferase hexapeptide (six repeats) K00640 - 2.3.1.30 2.256e-196 613.0
BYDH1_k127_5525057_7 Pyridoxal-phosphate dependent enzyme K01738 - 2.5.1.47 1.993e-195 611.0
BYDH1_k127_5525057_8 adenylyltransferase, small subunit K00957 - 2.7.7.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002467 598.0
BYDH1_k127_5525057_9 Tim44 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008193 536.0
BYDH1_k127_5554186_0 PFAM alpha beta hydrolase K07019 - - 1.024e-212 662.0
BYDH1_k127_5554186_1 Required for the activity of the bacterial periplasmic transport system of putrescine K02055,K11069 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000258 517.0
BYDH1_k127_5554186_2 hydrolase of the alpha beta superfamily K07018 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001104 386.0
BYDH1_k127_5554186_3 Ferredoxin - - - 0.000000000000000000000000000000000000000000000000000000000000001308 218.0
BYDH1_k127_5564211_0 GTP-binding protein, HSR1-related - - - 3.26e-292 898.0
BYDH1_k127_5564211_1 Protein of unknown function (DUF2868) - - - 2.282e-286 882.0
BYDH1_k127_5564211_2 PFAM Glutamine amidotransferase class-I K01951 - 6.3.5.2 0.000000000000001592 79.0
BYDH1_k127_5596164_0 Subtilase family K08651,K14645 - 3.4.21.66 1.213e-246 765.0
BYDH1_k127_5596164_1 GGDEF domain - - - 1.382e-217 676.0
BYDH1_k127_5596164_2 PFAM RNA polymerase sigma factor 70, region 4 type 2 K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001285 391.0
BYDH1_k127_5596164_3 Putative zinc-finger - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002678 392.0
BYDH1_k127_5596164_4 Bacterial protein of unknown function (Gcw_chp) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003512 359.0
BYDH1_k127_5855400_0 Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end K02407 - - 0.0 1052.0
BYDH1_k127_5855400_1 Flagellar hook-length control protein FliK - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008123 590.0
BYDH1_k127_5855400_2 flagellar protein FliS K02422 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000712 256.0
BYDH1_k127_5855400_3 Flagellar protein FliT K02423 - - 0.0000000000000000000000000000000000000000000000000000000000007457 210.0
BYDH1_k127_5855400_4 PFAM Flagellar protein FlaG protein K06603 - - 0.00000000000000000000000000000000000000003119 155.0
BYDH1_k127_5855400_5 FlhB HrpN YscU SpaS Family K04061 - - 0.000000000000000000000000000000002946 131.0
BYDH1_k127_5855400_6 Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella K02406 - - 0.000000000000000008994 82.0
BYDH1_k127_6078628_0 type II secretion system protein E K02454 - - 0.0 1060.0
BYDH1_k127_6078628_1 modulator of DNA gyrase K03592 - - 1.767e-283 873.0
BYDH1_k127_6078628_2 Type II secretion system K02455 - - 3.104e-245 758.0
BYDH1_k127_6078628_3 - - - - 3.109e-196 616.0
BYDH1_k127_6078628_4 Putative neutral zinc metallopeptidase K06973 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101 442.0
BYDH1_k127_6078628_5 Belongs to the UPF0307 family K09889 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001345 308.0
BYDH1_k127_6078628_6 general secretion pathway protein G K02456 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000009425 284.0
BYDH1_k127_6078628_7 PFAM Peptidase S8 S53, subtilisin kexin sedolisin - - - 0.0000000000000000000000000000000000000000000000000000000000000000001023 231.0
BYDH1_k127_6078628_8 Belongs to the sulfur carrier protein TusA family K04085 - - 0.0000000000000000000000000000000000001581 142.0
BYDH1_k127_6078628_9 Histidine kinase - - - 0.0000000000000000001223 90.0
BYDH1_k127_6127158_0 PFAM Peptidase S45, penicillin amidase K01434 - 3.5.1.11 0.0 1426.0
BYDH1_k127_6127158_1 Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02400 - - 0.0 1283.0
BYDH1_k127_6127158_10 FlgN protein K02399 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004259 269.0
BYDH1_k127_6127158_11 PFAM Anti-sigma-28 factor, FlgM K02398 - - 0.00000000000000000000000000000000000000000000000000006674 187.0
BYDH1_k127_6127158_2 signal recognition particle SRP54 K02404 - - 1.73e-246 764.0
BYDH1_k127_6127158_3 Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02401 - - 4.46e-217 677.0
BYDH1_k127_6127158_4 MotA/TolQ/ExbB proton channel family K02556 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001466 483.0
BYDH1_k127_6127158_5 Protein of unknown function (DUF3025) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001644 479.0
BYDH1_k127_6127158_6 Membrane MotB of proton-channel complex MotA/MotB K02557 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007687 465.0
BYDH1_k127_6127158_7 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes K02405 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002349 461.0
BYDH1_k127_6127158_8 Etoposide-induced protein 2.4 (EI24) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002784 427.0
BYDH1_k127_6127158_9 Belongs to the ParA family K04562 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002924 384.0
BYDH1_k127_6150820_0 Heat shock 70 kDa protein K04043 GO:0000166,GO:0000988,GO:0000989,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008144,GO:0008150,GO:0008270,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010033,GO:0010556,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0016989,GO:0017076,GO:0017111,GO:0019219,GO:0019222,GO:0022607,GO:0030554,GO:0031323,GO:0031326,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033554,GO:0034620,GO:0035639,GO:0035966,GO:0035967,GO:0036094,GO:0042221,GO:0043167,GO:0043168,GO:0043169,GO:0043531,GO:0043933,GO:0044085,GO:0044183,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0050789,GO:0050794,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0051171,GO:0051252,GO:0051716,GO:0060255,GO:0061077,GO:0065003,GO:0065007,GO:0070887,GO:0071310,GO:0071840,GO:0080090,GO:0097159,GO:0097367,GO:0140110,GO:1901265,GO:1901363,GO:1903506,GO:2001141 - 0.0 996.0
BYDH1_k127_6150820_1 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 1.685e-240 743.0
BYDH1_k127_6176871_0 AMP-dependent synthetase K01897 - 6.2.1.3 0.0 1082.0
BYDH1_k127_6176871_1 Ppx GppA phosphatase K01524 - 3.6.1.11,3.6.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009749 392.0
BYDH1_k127_6176871_2 Phosphoglycerate mutase family K08296 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008149 313.0
BYDH1_k127_6176871_3 HNH nucleases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001208 243.0
BYDH1_k127_6176871_4 Helix-hairpin-helix domain - - - 0.0000000000000000000000000000000000001413 145.0
BYDH1_k127_6202341_0 Methionine synthase K00548 - 2.1.1.13 0.0 2415.0
BYDH1_k127_6202341_1 TIGRFAM acetyl-CoA carboxylase, biotin carboxylase K01961 GO:0003674,GO:0003824,GO:0004075,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010565,GO:0016053,GO:0016874,GO:0016879,GO:0019216,GO:0019217,GO:0019222,GO:0019752,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032787,GO:0042304,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045717,GO:0045833,GO:0045922,GO:0046394,GO:0046890,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051055,GO:0062012,GO:0062014,GO:0065007,GO:0071704,GO:0072330,GO:0080090,GO:1901576 6.3.4.14,6.4.1.2 8.308e-292 897.0
BYDH1_k127_6202341_2 Ribosomal protein L11 methyltransferase K02687 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007038 565.0
BYDH1_k127_6202341_3 zinc-ribbon domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002841 428.0
BYDH1_k127_6202341_4 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006181 287.0
BYDH1_k127_6202341_5 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000335 277.0
BYDH1_k127_6202341_6 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.0000000000000001664 80.0
BYDH1_k127_6202341_7 - - - - 0.000000000004053 68.0
BYDH1_k127_6202341_9 - - - - 0.0005464 46.0
BYDH1_k127_6204216_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.0 1661.0
BYDH1_k127_6204216_1 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.0 1380.0
BYDH1_k127_6204216_10 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine K00831 - 2.6.1.52 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002173 530.0
BYDH1_k127_6204216_11 Prephenate dehydrogenase K04517 - 1.3.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005977 505.0
BYDH1_k127_6204216_12 FecR protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001773 329.0
BYDH1_k127_6204216_13 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002233 301.0
BYDH1_k127_6204216_14 Belongs to the UPF0234 family K09767 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006193 289.0
BYDH1_k127_6204216_15 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001303 242.0
BYDH1_k127_6204216_16 heme binding - - - 0.0000000000000000000000001988 108.0
BYDH1_k127_6204216_17 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.00000000000000006736 80.0
BYDH1_k127_6204216_2 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 - 6.3.4.5 4.594e-265 816.0
BYDH1_k127_6204216_3 D-isomer specific 2-hydroxyacid dehydrogenase K00058 - 1.1.1.399,1.1.1.95 3.895e-244 756.0
BYDH1_k127_6204216_4 PFAM aminotransferase class-III K00821 - 2.6.1.11,2.6.1.17 3.002e-240 744.0
BYDH1_k127_6204216_5 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 3.48e-232 720.0
BYDH1_k127_6204216_6 PFAM Peptidase S11, D-alanyl-D-alanine carboxypeptidase A K01286,K07258 - 3.4.16.4 1.174e-222 694.0
BYDH1_k127_6204216_7 NeuB family K03856 - 2.5.1.54 5.289e-217 674.0
BYDH1_k127_6204216_8 Prephenate dehydratase K01713,K14170 - 4.2.1.51,4.2.1.91,5.4.99.5 7.82e-211 657.0
BYDH1_k127_6204216_9 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 GO:0000050,GO:0003674,GO:0003824,GO:0004585,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0016743,GO:0019627,GO:0019752,GO:0034641,GO:0042450,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.3.3 3.146e-194 606.0
BYDH1_k127_6446074_0 BT1 family - - - 0.0 1033.0
BYDH1_k127_6446074_1 MltA specific insert domain K08304 - - 3.725e-256 790.0
BYDH1_k127_6446074_10 PEP-CTERM motif - - - 0.0000000000000000000000000000000000000321 150.0
BYDH1_k127_6446074_11 Competence protein ComEA K02237 - - 0.0000000000000000000000000000000000001568 143.0
BYDH1_k127_6446074_12 4-hydroxybenzoyl-CoA thioesterase K07107 - - 0.0000000000000000000000000000000004175 133.0
BYDH1_k127_6446074_14 PFAM Integrase, catalytic core K07497 - - 0.00003723 46.0
BYDH1_k127_6446074_2 TIGRFAM Ubiquinone biosynthesis hydroxylase, UbiH UbiF VisC COQ6 K03185 - - 2.294e-244 757.0
BYDH1_k127_6446074_3 Belongs to the peptidase S1C family K04691,K04772 - - 8.154e-226 702.0
BYDH1_k127_6446074_4 Belongs to the cysteine synthase cystathionine beta- synthase family K12339 GO:0000003,GO:0000096,GO:0000097,GO:0000902,GO:0000904,GO:0003006,GO:0003674,GO:0003824,GO:0004124,GO:0005488,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005773,GO:0005774,GO:0005777,GO:0005829,GO:0005886,GO:0006082,GO:0006520,GO:0006534,GO:0006535,GO:0006563,GO:0006790,GO:0006807,GO:0007568,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009507,GO:0009532,GO:0009536,GO:0009566,GO:0009567,GO:0009570,GO:0009653,GO:0009826,GO:0009856,GO:0009860,GO:0009932,GO:0009987,GO:0010035,GO:0010038,GO:0016020,GO:0016043,GO:0016049,GO:0016053,GO:0016740,GO:0016765,GO:0019344,GO:0019752,GO:0019842,GO:0019953,GO:0022414,GO:0030154,GO:0030170,GO:0031090,GO:0032501,GO:0032502,GO:0032989,GO:0036094,GO:0040007,GO:0042221,GO:0042579,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0044706,GO:0046394,GO:0046686,GO:0048037,GO:0048046,GO:0048468,GO:0048588,GO:0048589,GO:0048856,GO:0048868,GO:0048869,GO:0050662,GO:0050896,GO:0051704,GO:0060560,GO:0070279,GO:0071704,GO:0071840,GO:0071944,GO:0097159,GO:0098588,GO:0098805,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.5.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001246 571.0
BYDH1_k127_6446074_5 NIF3 (NGG1p interacting factor 3) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003107 473.0
BYDH1_k127_6446074_6 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process K03981 - 5.3.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003255 473.0
BYDH1_k127_6446074_7 PFAM DNA methylase, adenine-specific K03427 - 2.1.1.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001965 372.0
BYDH1_k127_6446074_8 PEP-CTERM motif - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006068 294.0
BYDH1_k127_6446074_9 Gram-negative-bacterium-type cell outer membrane assembly K04064,K06186 GO:0006950,GO:0006970,GO:0008150,GO:0009628,GO:0050896 - 0.0000000000000000000000000000000000000000000000000000000000000000000416 232.0
BYDH1_k127_6474210_0 Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine K12960 - 3.5.4.28,3.5.4.31 6.654e-283 870.0
BYDH1_k127_6474210_1 ABC-type uncharacterized transport system - - - 1.449e-266 823.0
BYDH1_k127_6474210_10 Belongs to the pseudouridine synthase RsuA family K06181 - 5.4.99.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004398 374.0
BYDH1_k127_6474210_11 Belongs to the ompA family K03286 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001145 335.0
BYDH1_k127_6474210_12 YGGT family K02221 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003912 326.0
BYDH1_k127_6474210_13 Phosphoglycerate mutase family K08296 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000254 266.0
BYDH1_k127_6474210_14 Belongs to the UPF0235 family K09131 - - 0.000000000000000000000000000000000000000000000000000004379 190.0
BYDH1_k127_6474210_2 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 - 3.2.2.23,4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004338 532.0
BYDH1_k127_6474210_3 Belongs to the 'phage' integrase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003126 521.0
BYDH1_k127_6474210_4 Domain of unknown function (DUF4340) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004297 498.0
BYDH1_k127_6474210_5 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005609 485.0
BYDH1_k127_6474210_6 O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway K00568 - 2.1.1.222,2.1.1.64 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000253 480.0
BYDH1_k127_6474210_7 ABC transporter K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002441 450.0
BYDH1_k127_6474210_8 HAD-superfamily hydrolase, subfamily IA, variant 1 K22292 - 3.1.3.105 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007301 441.0
BYDH1_k127_6474210_9 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002144 423.0
BYDH1_k127_6504428_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02621 - - 0.0 1417.0
BYDH1_k127_6504428_1 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02622 - - 0.0 1233.0
BYDH1_k127_6504428_10 Binds together with S18 to 16S ribosomal RNA K02990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003209 291.0
BYDH1_k127_6504428_11 Binds to the 23S rRNA K02939 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003874 271.0
BYDH1_k127_6504428_12 Binds single-stranded DNA at the primosome assembly site (PAS) K02686 - - 0.000000000000000000000000000000000000000000000000000003039 190.0
BYDH1_k127_6504428_13 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 - - 0.00000000000000000000000000000000000000000000000000001338 189.0
BYDH1_k127_6504428_14 PFAM Transposase, IS4-like K07481 - - 0.000000000000000000000000000000000008685 136.0
BYDH1_k127_6504428_15 Transposase - - - 0.00000000000002418 72.0
BYDH1_k127_6504428_2 it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins K02314 - 3.6.4.12 5.251e-292 899.0
BYDH1_k127_6504428_3 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766 GO:0000162,GO:0003674,GO:0003824,GO:0004048,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.18 8.968e-202 630.0
BYDH1_k127_6504428_4 HDOD domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003394 526.0
BYDH1_k127_6504428_5 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003489 522.0
BYDH1_k127_6504428_6 Belongs to the TrpC family K01609 GO:0003674,GO:0003824,GO:0004425,GO:0016829,GO:0016830,GO:0016831 4.1.1.48 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005652 501.0
BYDH1_k127_6504428_7 OST-HTH/LOTUS domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000186 455.0
BYDH1_k127_6504428_8 PFAM Glutamine amidotransferase class-I K01658 - 4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005147 386.0
BYDH1_k127_6504428_9 Ion transport protein K10716 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001661 353.0
BYDH1_k127_658055_0 Belongs to the 'phage' integrase family - - - 1.902e-236 735.0
BYDH1_k127_658055_1 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 1.252e-232 720.0
BYDH1_k127_658055_10 - - - - 0.0000000000000000000000000004945 124.0
BYDH1_k127_658055_11 - - - - 0.0000000000000000009049 89.0
BYDH1_k127_658055_13 - - - - 0.00000002288 64.0
BYDH1_k127_658055_2 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 GO:0002097,GO:0002099,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016853,GO:0018130,GO:0019438,GO:0034404,GO:0034470,GO:0034641,GO:0034654,GO:0034660,GO:0042455,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0051075,GO:0055086,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.99.17 3.188e-207 646.0
BYDH1_k127_658055_3 Plasmid recombination enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007846 421.0
BYDH1_k127_658055_4 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003385 259.0
BYDH1_k127_658055_5 Preprotein translocase subunit K03210 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003542 252.0
BYDH1_k127_658055_6 - - - - 0.000000000000000000000000000000000000000000000000000000000000000001282 235.0
BYDH1_k127_658055_7 Helix-turn-helix domain - - - 0.0000000000000000000000000000000000000000000704 164.0
BYDH1_k127_658055_8 Transcriptional regulator - - - 0.00000000000000000000000000000000000000001027 153.0
BYDH1_k127_658055_9 hmm pf01609 - - - 0.000000000000000000000000000001095 124.0
BYDH1_k127_6583340_0 Diguanylate cyclase - - - 8.864e-310 955.0
BYDH1_k127_6583340_1 PFAM aminotransferase, class I K00812 - 2.6.1.1 6.019e-244 757.0
BYDH1_k127_6583340_2 Functions in complex with FlhD as a master transcriptional regulator that regulates transcription of several flagellar and non-flagellar operons by binding to their promoter region. Activates expression of class 2 flagellar genes, including fliA, which is a flagellum-specific sigma factor that turns on the class 3 genes. Also regulates genes whose products function in a variety of physiological pathways K02402 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002748 351.0
BYDH1_k127_6583340_3 Functions in complex with FlhC as a master transcriptional regulator that regulates transcription of several flagellar and non-flagellar operons by binding to their promoter region. Activates expression of class 2 flagellar genes, including fliA, which is a flagellum-specific sigma factor that turns on the class 3 genes. Also regulates genes whose products function in a variety of physiological pathways K02403 - - 0.000000000000000000000000000000000000000000000000007818 181.0
BYDH1_k127_6583340_4 ISXO2-like transposase domain - - - 0.0003504 43.0
BYDH1_k127_6653236_0 Aconitase C-terminal domain K01681 - 4.2.1.3 0.0 1747.0
BYDH1_k127_6653236_1 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 0.0 1352.0
BYDH1_k127_6653236_10 PFAM Ammonia monooxygenase particulate methane monooxygenase, subunit C K10946 - - 0.00000000000000000000000000006045 115.0
BYDH1_k127_6653236_11 - - - - 0.000000000000000002635 89.0
BYDH1_k127_6653236_12 - - - - 0.00000001195 56.0
BYDH1_k127_6653236_13 - - - - 0.000004884 52.0
BYDH1_k127_6653236_14 - - - - 0.00001208 48.0
BYDH1_k127_6653236_15 TIGRFAM phosphate binding protein K02040 - - 0.0003703 43.0
BYDH1_k127_6653236_2 Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes - - - 0.0 1237.0
BYDH1_k127_6653236_3 Phosphate-selective porin O and P K07221 - - 3.106e-318 979.0
BYDH1_k127_6653236_4 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 5.64e-299 920.0
BYDH1_k127_6653236_5 WD40-like Beta Propeller Repeat - - - 2.532e-220 686.0
BYDH1_k127_6653236_6 Tfp pilus assembly protein FimV - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006049 607.0
BYDH1_k127_6653236_7 Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters K06204 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002111 280.0
BYDH1_k127_6653236_8 Domain of unknown function (DUF4124) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001646 256.0
BYDH1_k127_6653236_9 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 - - 0.000000000000000000000000000000000000000000000002501 173.0
BYDH1_k127_6717751_0 Polysaccharide biosynthesis/export protein K01991 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001706 498.0
BYDH1_k127_6717751_1 TIGRFAM peptidyl-prolyl cis-trans isomerase, EpsD family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002158 395.0
BYDH1_k127_6717751_2 Chain length determinant protein - - - 0.00000000000000000000000000000000000000000000000000000000000009821 214.0
BYDH1_k127_674057_0 Glycosyl hydrolases family 31 K01811 - 3.2.1.177 9.174e-241 756.0
BYDH1_k127_674057_1 transposase IS116 IS110 IS902 family - - - 0.000000000000000000000000000000000000000000000000000000006668 215.0
BYDH1_k127_674057_2 Neutral/alkaline non-lysosomal ceramidase, N-terminal - - - 0.0000000000607 66.0
BYDH1_k127_6798690_0 YqaJ-like viral recombinase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000001505 227.0
BYDH1_k127_6798690_1 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 GO:0000725,GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008047,GO:0008150,GO:0008152,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0030234,GO:0031668,GO:0033554,GO:0034641,GO:0042802,GO:0043085,GO:0043170,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050790,GO:0050896,GO:0051716,GO:0065007,GO:0065009,GO:0071496,GO:0071704,GO:0090304,GO:0097159,GO:0098772,GO:1901360,GO:1901363 - 0.0000000000000000000000000000000000000001148 154.0
BYDH1_k127_682122_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0 1621.0
BYDH1_k127_682122_1 NlpB/DapX lipoprotein K07287 - - 4.877e-229 711.0
BYDH1_k127_682122_2 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005417 579.0
BYDH1_k127_682122_3 SMART Diguanylate phosphodiesterase - - - 0.000000000000000000000000000000000000000000000000000000000001367 210.0
BYDH1_k127_6831421_0 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001037 329.0
BYDH1_k127_6831421_1 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 - - 0.000000000000000000000000000000000000000000000000000000000000000000001403 237.0
BYDH1_k127_6831421_2 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 - - 0.00000000000000000000000000000000000000000000000000000000000000000004938 231.0
BYDH1_k127_6831421_3 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit K02895 - - 0.00000000000000000000000000000000000000000000000008908 178.0
BYDH1_k127_6831421_4 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 - - 0.00000000000000000000000000000000000000000001748 163.0
BYDH1_k127_6831767_0 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 - 6.3.4.4 5.92e-280 861.0
BYDH1_k127_6831767_1 Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine K02502 - - 4.961e-223 695.0
BYDH1_k127_6831767_2 HflC and HflK could regulate a protease K04087 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002933 550.0
BYDH1_k127_6831767_3 HflC and HflK could encode or regulate a protease K04088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005364 282.0
BYDH1_k127_6831767_4 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000001018 223.0
BYDH1_k127_6831767_5 - - - - 0.000000000000000000000000000000000000000000000000000000000000002558 218.0
BYDH1_k127_6831767_6 - - - - 0.000000000000000000000000000000000000000007688 156.0
BYDH1_k127_6831767_7 Binds directly to 16S ribosomal RNA K02968 - - 0.00000000000000000000000000000000000000001451 153.0
BYDH1_k127_6831767_8 Uncharacterized protein conserved in bacteria (DUF2065) K09937 - - 0.00000000000000000000000000006273 116.0
BYDH1_k127_6831767_9 PFAM transposase, IS4 family protein K07481 - - 0.0006215 44.0
BYDH1_k127_6950684_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 - - 0.0 1192.0
BYDH1_k127_6950684_1 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002447 555.0
BYDH1_k127_6950684_2 SNARE associated Golgi protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000424 316.0
BYDH1_k127_695809_0 PFAM Rieske 2Fe-2S K00499 - 1.14.15.7 3.024e-254 783.0
BYDH1_k127_695809_1 EamA-like transporter family K15270 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001103 555.0
BYDH1_k127_695809_2 repeat protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000485 445.0
BYDH1_k127_695809_3 SpoIIAA-like - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005414 246.0
BYDH1_k127_7059455_0 Belongs to the peptidase S11 family K01286,K07258 - 3.4.16.4 6.019e-244 754.0
BYDH1_k127_7059455_1 Belongs to the IlvD Edd family K01687 - 4.2.1.9 5.009e-225 698.0
BYDH1_k127_7059455_2 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 1.33e-206 642.0
BYDH1_k127_7059455_3 PFAM Aminotransferase, class IV K00824 - 2.6.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001292 548.0
BYDH1_k127_7059455_4 Protein of unknown function (DUF2914) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006573 419.0
BYDH1_k127_7059455_5 Nudix hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001206 372.0
BYDH1_k127_7059455_6 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 - 2.3.1.181 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005368 343.0
BYDH1_k127_7059455_7 OsmC-like protein K07397 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001386 276.0
BYDH1_k127_7059455_8 PFAM Cytochrome c, class I K08738 GO:0005575,GO:0005623,GO:0042597,GO:0044464 - 0.000000000000000000000000000000000000000000000000000005863 190.0
BYDH1_k127_7059455_9 Belongs to the UPF0250 family K09158 - - 0.000000000000000000000000000000000000000000000005725 172.0
BYDH1_k127_7068754_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1858.0
BYDH1_k127_7068754_1 TIGRFAM ATPase, P-type, K Mg Cd Cu Zn Na Ca Na H-transporter K01537 - 3.6.3.8 0.0 1475.0
BYDH1_k127_7068754_10 Iron-storage protein K03594 - 1.16.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002559 309.0
BYDH1_k127_7068754_11 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 GO:0000725,GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008047,GO:0008150,GO:0008152,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0030234,GO:0031668,GO:0033554,GO:0034641,GO:0042802,GO:0043085,GO:0043170,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050790,GO:0050896,GO:0051716,GO:0065007,GO:0065009,GO:0071496,GO:0071704,GO:0090304,GO:0097159,GO:0098772,GO:1901360,GO:1901363 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009105 290.0
BYDH1_k127_7068754_12 Sulphur transport K07112 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004518 251.0
BYDH1_k127_7068754_13 transporter component K07112 - - 0.000000000000000000000000000000000000000000000000000000000009725 209.0
BYDH1_k127_7068754_14 transcriptional regulator, ArsR - - - 0.0000000000000000000000000000000000000000000000000000005954 193.0
BYDH1_k127_7068754_15 - - - - 0.00000000000000000000000000000286 120.0
BYDH1_k127_7068754_16 Hemin uptake protein hemP - - - 0.00000000000000000000008162 99.0
BYDH1_k127_7068754_17 MOFRL family K11529 - 2.7.1.165 0.00000000000000000001328 93.0
BYDH1_k127_7068754_2 Pyridine nucleotide-disulphide oxidoreductase K17218 - 1.8.5.4 7.961e-295 910.0
BYDH1_k127_7068754_3 Sugar (and other) transporter - - - 3.981e-262 811.0
BYDH1_k127_7068754_4 PFAM Heat shock protein DnaJ, N-terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009328 593.0
BYDH1_k127_7068754_5 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009371 566.0
BYDH1_k127_7068754_6 MOFRL family K11529 - 2.7.1.165 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000872 512.0
BYDH1_k127_7068754_7 membrane transporter protein K07090 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009385 387.0
BYDH1_k127_7068754_8 Uncharacterized protein conserved in bacteria (DUF2325) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002188 342.0
BYDH1_k127_7068754_9 Tyrosine phosphatase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003218 325.0
BYDH1_k127_712262_0 Required for the activity of the bacterial periplasmic transport system of putrescine K02055,K11069 - - 2.931e-229 711.0
BYDH1_k127_712262_1 Binding-protein-dependent transport system inner membrane component K02054,K11071 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006824 556.0
BYDH1_k127_712262_2 Domain of unknown function (DUF4372) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001557 534.0
BYDH1_k127_712262_3 Binding-protein-dependent transport system inner membrane component K11070 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005232 482.0
BYDH1_k127_712262_4 PFAM Transposase, IS4-like K07481 - - 0.000000000000000000000003589 104.0
BYDH1_k127_712262_5 Domain of unknown function (DUF4372) - - - 0.0000000000000000001872 88.0
BYDH1_k127_712262_6 Esterase-like activity of phytase - - - 0.00000000001399 64.0
BYDH1_k127_713761_0 EAL domain - - - 0.0 1156.0
BYDH1_k127_713761_1 PFAM Phospholipid glycerol acyltransferase - - - 0.0 1140.0
BYDH1_k127_713761_10 Predicted integral membrane protein (DUF2269) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001527 359.0
BYDH1_k127_713761_11 low molecular weight K03741 - 1.20.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008131 303.0
BYDH1_k127_713761_12 endonuclease K07451 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005416 293.0
BYDH1_k127_713761_13 PFAM Glyoxalase bleomycin resistance protein dioxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000799 252.0
BYDH1_k127_713761_14 PFAM Arsenical resistance operon trans-acting repressor ArsD - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001675 239.0
BYDH1_k127_713761_15 - - - - 0.000000000000000000000000000000000000000000000000000000002725 202.0
BYDH1_k127_713761_16 Regulatory protein ArsR K03892 - - 0.00000000000000000000000000000000000000000000000000000000287 201.0
BYDH1_k127_713761_17 HicB_like antitoxin of bacterial toxin-antitoxin system - - - 0.0000000000000000000000000000000000000234 143.0
BYDH1_k127_713761_18 Esterase-like activity of phytase - - - 0.00000000001399 64.0
BYDH1_k127_713761_2 SMART ATPase, AAA type, core K01551 - 3.6.3.16 0.0 1078.0
BYDH1_k127_713761_20 Belongs to the peptidase S16 family - - - 0.0000000002601 61.0
BYDH1_k127_713761_3 Involved in arsenical resistance. Thought to form the channel of an arsenite pump K03893 - - 6.96e-240 745.0
BYDH1_k127_713761_4 Glycosyl transferase family 1 - - - 2.494e-229 710.0
BYDH1_k127_713761_5 Peptidase M14, carboxypeptidase A - - - 3.684e-217 674.0
BYDH1_k127_713761_6 PFAM Diacylglycerol kinase, catalytic - - - 1.788e-204 638.0
BYDH1_k127_713761_7 Patatin-like phospholipase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002689 580.0
BYDH1_k127_713761_8 Calcineurin-like phosphoesterase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009402 562.0
BYDH1_k127_713761_9 PFAM Alpha beta hydrolase fold-1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001743 449.0
BYDH1_k127_7164636_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1520.0
BYDH1_k127_7164636_1 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 - - 1.612e-272 839.0
BYDH1_k127_7164636_2 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 5.889e-246 763.0
BYDH1_k127_7164636_3 PFAM Endonuclease exonuclease phosphatase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000025 520.0
BYDH1_k127_7164636_4 Short-chain dehydrogenase reductase SDR - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002651 480.0
BYDH1_k127_7164636_5 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003415 416.0
BYDH1_k127_7164636_6 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995 - 2.7.8.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008473 351.0
BYDH1_k127_7164636_7 CDP-archaeol synthase K19664 - 2.7.7.67 0.00000001832 56.0
BYDH1_k127_7164636_8 - - - - 0.000007581 49.0
BYDH1_k127_7166999_0 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K11072 - 3.6.3.31 5.398e-215 670.0
BYDH1_k127_7166999_1 cytochrome c peroxidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001862 471.0
BYDH1_k127_7166999_2 - - - - 0.0000000000000000000006727 109.0
BYDH1_k127_7207682_0 Belongs to the Dps family K03594 - 1.16.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001787 304.0
BYDH1_k127_7207682_1 Glycine-zipper domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001279 263.0
BYDH1_k127_7207682_2 Glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.00000000000000000000000000000000000000000000000000000000000000000000742 243.0
BYDH1_k127_7207682_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000006975 225.0
BYDH1_k127_7207682_4 - - - - 0.00000000000000000000000000000000000000000000000007719 179.0
BYDH1_k127_7207682_5 Belongs to the BolA IbaG family K05527 - - 0.000000000000000000000000000000000000000000000002884 174.0
BYDH1_k127_7207682_6 - - - - 0.00000000000001158 77.0
BYDH1_k127_7255510_0 Belongs to the GPI family K01810 - 5.3.1.9 0.0 1030.0
BYDH1_k127_7255510_1 Belongs to the glycosyl hydrolase 57 family K22451 - 2.4.1.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002271 462.0
BYDH1_k127_7372684_0 FtsX-like permease family K02004 - - 4.215e-238 741.0
BYDH1_k127_7372684_1 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001013 415.0
BYDH1_k127_7372684_2 PPIC-type PPIASE domain K03769 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000004557 184.0
BYDH1_k127_7372684_3 - - - - 0.0000000000000000000000000000000000000009521 150.0
BYDH1_k127_7372684_4 TIGRFAM methyltransferase FkbM family - - - 0.000000000000003592 78.0
BYDH1_k127_7379306_0 Pyruvate kinase, barrel domain K00873 - 2.7.1.40 0.0 1059.0
BYDH1_k127_7379306_1 domain, Protein - - - 1.325e-310 956.0
BYDH1_k127_7379306_10 Esterase-like activity of phytase - - - 0.000000000000000000000000000000000000000000000000000005375 191.0
BYDH1_k127_7379306_11 - - - - 0.0000000000000000000000000000000001892 133.0
BYDH1_k127_7379306_2 Part of the ABC transporter complex PstSACB involved in phosphate import K02040 - - 8.305e-216 671.0
BYDH1_k127_7379306_3 probably responsible for the translocation of the substrate across the membrane K02037 - - 2.548e-194 607.0
BYDH1_k127_7379306_4 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009664 552.0
BYDH1_k127_7379306_5 PFAM binding-protein-dependent transport systems inner membrane component K02038 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005591 541.0
BYDH1_k127_7379306_6 Sodium Bile acid symporter family K03453 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001434 490.0
BYDH1_k127_7379306_7 PFAM TonB-dependent receptor, beta-barrel - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002917 369.0
BYDH1_k127_7379306_8 Esterase-like activity of phytase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000006161 259.0
BYDH1_k127_7379306_9 Sulfotransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002885 255.0
BYDH1_k127_7525525_0 intramolecular transferase activity, transferring amino groups K01845 - 5.4.3.8 2.203e-275 848.0
BYDH1_k127_7525525_1 Methionine aminopeptidase K01265 GO:0003674,GO:0003824,GO:0004177,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008198,GO:0008233,GO:0008235,GO:0008237,GO:0008238,GO:0009987,GO:0016787,GO:0019538,GO:0036211,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0070006,GO:0070011,GO:0070084,GO:0071704,GO:0140096,GO:1901564 3.4.11.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001002 552.0
BYDH1_k127_7525525_2 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 - 2.7.7.56 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002837 476.0
BYDH1_k127_7525525_3 Cytochrome c, class I - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005365 390.0
BYDH1_k127_7525525_4 PFAM Sporulation domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004169 358.0
BYDH1_k127_7525525_5 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 - 2.5.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007269 358.0
BYDH1_k127_7525525_6 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 - 3.6.1.66 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002197 304.0
BYDH1_k127_7525525_7 Phosphomethylpyrimidine kinase K00941 - 2.7.1.49,2.7.4.7 0.00000000000000000000000000000000000000000000000000000000000001294 218.0
BYDH1_k127_75881_0 Tetratricopeptide repeat - - - 0.0 1080.0
BYDH1_k127_75881_1 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 1.206e-201 629.0
BYDH1_k127_75881_10 Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell K03608 - - 0.00000000000000000000000000000000000000000000001214 172.0
BYDH1_k127_75881_2 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 8.366e-197 614.0
BYDH1_k127_75881_3 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 - 2.7.1.148 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006959 537.0
BYDH1_k127_75881_4 Belongs to the ParA family K03609 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008368 522.0
BYDH1_k127_75881_5 Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization K03610 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005537 467.0
BYDH1_k127_75881_6 Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein K02494 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007732 413.0
BYDH1_k127_75881_7 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002427 394.0
BYDH1_k127_75881_8 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 - 3.1.1.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001528 390.0
BYDH1_k127_75881_9 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.0000000000000000000000000000000000000000000000000000000000000001232 222.0
BYDH1_k127_7647203_0 Radical SAM superfamily K04069 - 1.97.1.4 6.345e-242 748.0
BYDH1_k127_7647203_1 Lipase (class 3) - - - 3.966e-238 739.0
BYDH1_k127_7647203_2 PFAM UPF0103 Mediator of ErbB2-driven cell motility K06990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004007 492.0
BYDH1_k127_7647203_3 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009588 437.0
BYDH1_k127_7647203_4 Domain of unknown function (DUF4372) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002604 393.0
BYDH1_k127_7647203_5 phosphoribosyltransferase K07100 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000458 368.0
BYDH1_k127_7647203_6 PFAM AMMECR1 domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000007059 221.0
BYDH1_k127_7647203_7 ISXO2-like transposase domain - - - 0.0001028 45.0
BYDH1_k127_7684361_0 Metallo-peptidase family M12B Reprolysin-like - - - 3.037e-293 905.0
BYDH1_k127_7684361_1 Protein tyrosine kinase K08282 - 2.7.11.1 2.94e-237 743.0
BYDH1_k127_7684361_2 sequence-specific DNA binding - - - 0.0001134 46.0
BYDH1_k127_780339_0 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710 - 4.2.1.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007281 529.0
BYDH1_k127_780339_1 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 - 1.1.1.133 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001471 289.0
BYDH1_k127_780339_2 positive regulation of growth K07746 - - 0.0000000000000000000000000234 110.0
BYDH1_k127_780339_3 Transposase IS200 like - - - 0.0008146 43.0
BYDH1_k127_7822061_0 Mediates influx of magnesium ions K03284 - - 7.576e-224 695.0
BYDH1_k127_7822061_1 PFAM NAD-dependent epimerase dehydratase K01784 - 5.1.3.2 2.304e-217 676.0
BYDH1_k127_7822061_2 hydrolase activity, acting on ester bonds - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003478 604.0
BYDH1_k127_7822061_3 UTP-glucose-1-phosphate uridylyltransferase K00963 - 2.7.7.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006123 573.0
BYDH1_k127_7822061_4 Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN NodQ subfamily K00955,K00956 - 2.7.1.25,2.7.7.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001747 535.0
BYDH1_k127_7822061_5 Protein of unknown function VcgC/VcgE (DUF2780) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002486 303.0
BYDH1_k127_7822061_6 - - - - 0.000000000000000000000000000000000006016 136.0
BYDH1_k127_7822061_7 - - - - 0.0000000000000003992 79.0
BYDH1_k127_7822061_8 Cytidylyltransferase-like - - - 0.000003356 49.0
BYDH1_k127_7823849_0 Vacuole effluxer Atg22 like K06902 - - 9.833e-265 817.0
BYDH1_k127_7823849_1 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 1.078e-236 732.0
BYDH1_k127_7823849_2 Sulfotransferase family - - - 1.899e-201 627.0
BYDH1_k127_7823849_3 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 - 4.2.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000261 606.0
BYDH1_k127_7823849_4 Sulfatase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001212 578.0
BYDH1_k127_7823849_5 Belongs to the Nudix hydrolase family. NudJ subfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002544 292.0
BYDH1_k127_7823849_6 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006365 258.0
BYDH1_k127_7823849_7 - - - - 0.000000000000000000002719 93.0
BYDH1_k127_7904100_0 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455 - - 0.0 1170.0
BYDH1_k127_7904100_1 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 0.0 1142.0
BYDH1_k127_7904100_2 Reutilizes the intact tripeptide L-alanyl-gamma-D- glutamyl-meso-diaminopimelate by linking it to UDP-N- acetylmuramate K02558 - 6.3.2.45 1.736e-292 899.0
BYDH1_k127_7904100_3 Glutamate-cysteine ligase K01919 - 6.3.2.2 3.168e-281 865.0
BYDH1_k127_7904100_4 Multicopper oxidase K00368,K08100 - 1.3.3.5,1.7.2.1 8.91e-227 704.0
BYDH1_k127_7904100_5 Belongs to the prokaryotic GSH synthase family K01920 - 6.3.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003596 527.0
BYDH1_k127_7904100_6 Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5- dihydroxy-2-cyclopenten-1-yl) moiety of the queuosine in the wobble position of the QUC anticodon K01894 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005431 516.0
BYDH1_k127_7904100_7 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis K00759 GO:0000166,GO:0001775,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0003674,GO:0003824,GO:0003999,GO:0005488,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006807,GO:0006810,GO:0006887,GO:0006955,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0012505,GO:0016192,GO:0016208,GO:0016740,GO:0016757,GO:0016763,GO:0017076,GO:0018130,GO:0019438,GO:0030141,GO:0030554,GO:0031410,GO:0031974,GO:0031981,GO:0031982,GO:0031983,GO:0032553,GO:0032555,GO:0032559,GO:0032940,GO:0034641,GO:0034654,GO:0034774,GO:0036094,GO:0036230,GO:0042119,GO:0043094,GO:0043101,GO:0043167,GO:0043168,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043299,GO:0043312,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044433,GO:0044444,GO:0044446,GO:0044464,GO:0045055,GO:0045321,GO:0046483,GO:0046903,GO:0050896,GO:0051179,GO:0051234,GO:0060205,GO:0070013,GO:0071704,GO:0072521,GO:0072522,GO:0097159,GO:0097367,GO:0097708,GO:0099503,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.4.2.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002502 346.0
BYDH1_k127_7904100_8 Cytochrome c - - - 0.0000000000000000000000003258 108.0
BYDH1_k127_7935950_0 Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation K02021,K11085 - - 3.658e-286 889.0
BYDH1_k127_7935950_10 Glycosyltransferase family 10 (fucosyltransferase) C-term - - - 0.0000005028 61.0
BYDH1_k127_7935950_11 Glycosyltransferase Family 4 K02844 - - 0.0007058 43.0
BYDH1_k127_7935950_2 COG0438 Glycosyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001179 381.0
BYDH1_k127_7935950_3 Glycosyl transferase, family 2 K20444 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005532 291.0
BYDH1_k127_7935950_4 Glycosyltransferase family 25 (LPS biosynthesis protein) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001128 280.0
BYDH1_k127_7935950_5 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004694 265.0
BYDH1_k127_7935950_6 Caenorhabditis protein of unknown function, DUF268 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000253 254.0
BYDH1_k127_7935950_7 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000002593 192.0
BYDH1_k127_7935950_8 O-methyltransferase activity - - - 0.000000000000000000000000000000000000000000000000004388 190.0
BYDH1_k127_7935950_9 Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP K01525 - 3.6.1.41 0.000000000000000000000000000000000000002409 147.0
BYDH1_k127_7940389_0 PFAM Glycosyl transferase, family 2 K00721,K00786 - 2.4.1.83 0.0 1632.0
BYDH1_k127_7940389_1 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K00646,K09458 GO:0003674,GO:0003824,GO:0004312,GO:0004315,GO:0016740,GO:0016746,GO:0016747,GO:0033817 2.3.1.179 1.217e-260 804.0
BYDH1_k127_7940389_10 Uncharacterized ACR, COG1399 K07040 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001807 322.0
BYDH1_k127_7940389_11 Protein of unknown function (DUF4019) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006015 250.0
BYDH1_k127_7940389_12 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.000000000000000000000000000000000000003621 146.0
BYDH1_k127_7940389_13 Belongs to the bacterial ribosomal protein bL32 family K02911 - - 0.000000000000000000000000000000001548 129.0
BYDH1_k127_7940389_2 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 1.43e-214 668.0
BYDH1_k127_7940389_3 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 2.484e-204 636.0
BYDH1_k127_7940389_4 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 1.671e-195 612.0
BYDH1_k127_7940389_5 malonyl CoA-acyl carrier protein transacylase K00645,K13935,K15355 - 2.3.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007909 556.0
BYDH1_k127_7940389_6 PFAM Zinc iron permease K16267 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001006 484.0
BYDH1_k127_7940389_7 Belongs to the multicopper oxidase YfiH RL5 family K05810 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001013 475.0
BYDH1_k127_7940389_8 Ankyrin repeat K06867 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009174 460.0
BYDH1_k127_7940389_9 Short-chain dehydrogenase reductase SDR K00059 GO:0003674,GO:0003824,GO:0006725,GO:0008150,GO:0008152,GO:0009987,GO:0010130,GO:0016043,GO:0016491,GO:0016614,GO:0016616,GO:0018913,GO:0018915,GO:0022607,GO:0042537,GO:0043933,GO:0044085,GO:0044237,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:1901360 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002739 454.0
BYDH1_k127_7987592_0 Belongs to the CarB family K01955 - 6.3.5.5 0.0 2072.0
BYDH1_k127_7987592_1 Cytochrome c1 - - - 0.0 1257.0
BYDH1_k127_7987592_10 Belongs to the 'phage' integrase family - - - 2.728e-253 783.0
BYDH1_k127_7987592_11 Belongs to the CarA family K01956 - 6.3.5.5 7.419e-247 763.0
BYDH1_k127_7987592_12 TIGRFAM phosphate binding protein K02040 - - 5.564e-201 627.0
BYDH1_k127_7987592_13 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006208 589.0
BYDH1_k127_7987592_14 PFAM Integrase, catalytic region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005182 514.0
BYDH1_k127_7987592_15 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 - 2.5.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009858 503.0
BYDH1_k127_7987592_16 Belongs to the NadC ModD family K00767 - 2.4.2.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004648 460.0
BYDH1_k127_7987592_17 Mut7-C ubiquitin K09122 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001043 454.0
BYDH1_k127_7987592_18 Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit K02427 - 2.1.1.166 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009501 389.0
BYDH1_k127_7987592_19 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002929 295.0
BYDH1_k127_7987592_2 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009056,GO:0009057,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019538,GO:0030163,GO:0042623,GO:0042802,GO:0043170,GO:0044238,GO:0044464,GO:0070011,GO:0071704,GO:0071944,GO:0140096,GO:1901564,GO:1901565,GO:1901575 - 0.0 1241.0
BYDH1_k127_7987592_20 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000142 290.0
BYDH1_k127_7987592_21 CRS1_YhbY K07574 - - 0.00000000000000000000000000000000000000000000000000000000002282 207.0
BYDH1_k127_7987592_22 Cytotoxic translational repressor of toxin-antitoxin stability system - - - 0.0000000000000000000000000000000000000000000000000000000234 198.0
BYDH1_k127_7987592_23 PFAM transposase IS3 IS911 family protein K07483 - - 0.0000000000000000000000000000000000000000000000004238 176.0
BYDH1_k127_7987592_24 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.000000000000000000000000000000000000000007113 155.0
BYDH1_k127_7987592_25 - - - - 0.00000000000000000000000000000000000000004949 160.0
BYDH1_k127_7987592_26 Helix-turn-helix XRE-family like proteins - - - 0.00000000000000000000000000000001559 128.0
BYDH1_k127_7987592_27 Helix-turn-helix domain - - - 0.00000000000000000000000001519 109.0
BYDH1_k127_7987592_3 TIGRFAM Oxaloacetate decarboxylase, alpha subunit K01960 - 6.4.1.1 0.0 1174.0
BYDH1_k127_7987592_30 SMART Diguanylate phosphodiesterase - - - 0.0000000000003999 70.0
BYDH1_k127_7987592_4 Belongs to the glutamate synthase family - - - 6.98e-321 983.0
BYDH1_k127_7987592_5 TIGRFAM Acetyl-CoA carboxylase, biotin carboxylase K01959 - 6.4.1.1 3.479e-303 934.0
BYDH1_k127_7987592_6 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 4.589e-292 897.0
BYDH1_k127_7987592_7 Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme K02302,K02303 - 1.3.1.76,2.1.1.107,4.99.1.4 2.538e-281 868.0
BYDH1_k127_7987592_8 Belongs to the 5'-nucleotidase family K01081 - 3.1.3.5 3.85e-280 867.0
BYDH1_k127_7987592_9 Cytochrome P450 - - - 2.736e-276 850.0
BYDH1_k127_8037380_0 Diguanylate cyclase phosphodiesterase with PAS PAC - - - 0.0 1334.0
BYDH1_k127_8037380_1 signal transduction protein containing a membrane domain an EAL and a GGDEF domain - - - 0.0 1103.0
BYDH1_k127_8037380_2 acetyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003986 609.0
BYDH1_k127_8037380_3 PFAM RIO-like kinase K07178 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001673 540.0
BYDH1_k127_8037380_4 antibiotic catabolic process - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001868 456.0
BYDH1_k127_8037380_5 PEP-CTERM motif - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003302 358.0
BYDH1_k127_8037380_6 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002648 307.0
BYDH1_k127_8037380_7 PFAM Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.00000000000000000000000000000000000000005253 151.0
BYDH1_k127_8037380_8 Putative quorum-sensing-regulated virulence factor K09954 - - 0.00000000000000000000000000000000000000251 146.0
BYDH1_k127_8037380_9 Sel1 domain protein repeat-containing protein K07126 - - 0.0005303 44.0
BYDH1_k127_8092339_0 PFAM cell divisionFtsK SpoIIIE K03466 - - 0.0 1448.0
BYDH1_k127_8092339_1 AAA C-terminal domain K07478 - - 1.614e-269 835.0
BYDH1_k127_8092339_10 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009255 404.0
BYDH1_k127_8092339_11 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001116 369.0
BYDH1_k127_8092339_12 PFAM MotA TolQ ExbB proton channel K03561 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001085 336.0
BYDH1_k127_8092339_13 Biopolymer transport protein ExbD TolR K03559 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003385 259.0
BYDH1_k127_8092339_14 RDD family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002377 256.0
BYDH1_k127_8092339_15 PFAM Biopolymer transport protein ExbD TolR K03559 - - 0.0000000000000000000000000000000000000000000000000000000000000000002374 230.0
BYDH1_k127_8092339_16 Phosphate-starvation-inducible E - - - 0.000000000000000000000000000000000000000000000000000000000000000243 221.0
BYDH1_k127_8092339_17 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) K03634 - - 0.00000000000000000000000006011 115.0
BYDH1_k127_8092339_18 PFAM TonB-dependent receptor, beta-barrel - - - 0.00000000000000006382 83.0
BYDH1_k127_8092339_19 May be involved in recombination K03554 - - 0.000000000000001704 76.0
BYDH1_k127_8092339_2 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 7.565e-269 830.0
BYDH1_k127_8092339_3 PFAM MotA TolQ ExbB proton channel K03561 - - 6.149e-220 692.0
BYDH1_k127_8092339_4 TPR repeat - - - 3.379e-215 672.0
BYDH1_k127_8092339_5 diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003294 497.0
BYDH1_k127_8092339_6 MotA TolQ ExbB proton channel K03561 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001111 460.0
BYDH1_k127_8092339_7 TIGRFAM Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB K07657 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003061 455.0
BYDH1_k127_8092339_8 Protein of unknown function (DUF3450) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002111 417.0
BYDH1_k127_8092339_9 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004395 411.0
BYDH1_k127_8150754_0 Catalyzes cross-linking of the peptidoglycan cell wall K05515 - 3.4.16.4 0.0 1256.0
BYDH1_k127_8150754_1 Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis K03688 - - 1.926e-314 963.0
BYDH1_k127_8150754_10 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine K07566 - 2.7.7.87 1.915e-205 641.0
BYDH1_k127_8150754_11 Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr) K06023 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001572 601.0
BYDH1_k127_8150754_12 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002207 567.0
BYDH1_k127_8150754_13 Involved in formation and maintenance of cell shape K03570 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002615 554.0
BYDH1_k127_8150754_14 Haloacid dehalogenase-like hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001455 505.0
BYDH1_k127_8150754_15 Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001317 495.0
BYDH1_k127_8150754_16 Branched-chain amino acid ATP-binding cassette transporter K06861 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000508 460.0
BYDH1_k127_8150754_17 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 - 2.5.1.129 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003098 397.0
BYDH1_k127_8150754_18 Belongs to the 5-formyltetrahydrofolate cyclo-ligase family K01934 - 6.3.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008234 383.0
BYDH1_k127_8150754_19 protein conserved in bacteria K03690 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011 363.0
BYDH1_k127_8150754_2 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 5.73e-308 945.0
BYDH1_k127_8150754_20 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003804 361.0
BYDH1_k127_8150754_21 Lipopolysaccharide-assembly, LptC-related K11719 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002623 346.0
BYDH1_k127_8150754_22 Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane K09774 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001487 343.0
BYDH1_k127_8150754_23 PTS IIA-like nitrogen-regulatory protein PtsN K02806 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001702 245.0
BYDH1_k127_8150754_24 Uncharacterised BCR, YnfA/UPF0060 family K09771 - - 0.00000000000000000000000000000000000000000000000000000000000000006585 222.0
BYDH1_k127_8150754_25 Sigma 54 modulation protein K05808 - - 0.00000000000000000000000000000000000000000000000000000000008136 207.0
BYDH1_k127_8150754_26 shape-determining protein MreD K03571 - - 0.0000000000000000000000000000000000000000000000000000008162 197.0
BYDH1_k127_8150754_27 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.000000000000000000000000000000000000000000000002565 173.0
BYDH1_k127_8150754_28 PFAM Modulator of Rho-dependent transcription termination K19000 - - 0.0000000000000000000000000000000000000000000158 164.0
BYDH1_k127_8150754_29 Subunit R is required for both nuclease and ATPase activities, but not for modification K01153 - 3.1.21.3 0.000006558 49.0
BYDH1_k127_8150754_3 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 4.628e-301 927.0
BYDH1_k127_8150754_30 Subunit R is required for both nuclease and ATPase activities, but not for modification K01153 - 3.1.21.3 0.00001655 49.0
BYDH1_k127_8150754_4 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03092 - - 4.918e-284 876.0
BYDH1_k127_8150754_5 Catalyzes the phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol K06131 - - 2.828e-243 753.0
BYDH1_k127_8150754_6 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 8.984e-235 727.0
BYDH1_k127_8150754_7 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 1.073e-219 684.0
BYDH1_k127_8150754_8 cell shape determining protein, MreB Mrl K03569 - - 1.6e-219 683.0
BYDH1_k127_8150754_9 TIGRFAM A G-specific adenine glycosylase K03575 - - 1.837e-219 683.0
BYDH1_k127_8232032_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.0 1164.0
BYDH1_k127_8232032_1 FAD linked oxidases, C-terminal domain K00102,K00104,K03777 - 1.1.2.4,1.1.3.15,1.1.5.12 1.509e-317 972.0
BYDH1_k127_8232032_2 4Fe-4S double cluster binding domain K11473 - - 4.429e-259 799.0
BYDH1_k127_8232032_3 SMART Peptidoglycan-binding Lysin subgroup K16291 - - 1.566e-220 687.0
BYDH1_k127_8232032_4 FAD linked oxidase K00104,K11472 - 1.1.3.15 7.792e-199 623.0
BYDH1_k127_8232032_5 Carotenoid biosynthesis protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002515 567.0
BYDH1_k127_8232032_6 Asparaginase K01424,K13051 - 3.4.19.5,3.5.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004806 565.0
BYDH1_k127_8232032_7 PFAM 6-phosphogluconate dehydrogenase, NAD-binding K00042 - 1.1.1.60 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001496 556.0
BYDH1_k127_8232032_8 PFAM Transposase, IS4-like - - - 0.00000000002913 63.0
BYDH1_k127_8272501_0 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 0.0 1345.0
BYDH1_k127_8272501_1 TonB-dependent Receptor Plug Domain K02014 - - 0.0 1324.0
BYDH1_k127_8272501_2 Glucose / Sorbosone dehydrogenase K21430 - - 1.585e-237 737.0
BYDH1_k127_8272501_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002062 491.0
BYDH1_k127_8272501_4 - - - - 0.0000000000000000000000000000000000000000000000000000000001371 208.0
BYDH1_k127_8272501_5 RES - - - 0.0000000000000008464 78.0
BYDH1_k127_8272501_8 PFAM Integrase, catalytic core K07497 - - 0.0002427 46.0
BYDH1_k127_8387192_0 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 6.936e-225 698.0
BYDH1_k127_8387192_1 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 - 2.1.1.297 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001285 531.0
BYDH1_k127_8387192_2 Belongs to the glutaredoxin family. Monothiol subfamily K07390 - - 0.00000000002032 64.0
BYDH1_k127_8411807_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1472.0
BYDH1_k127_8411807_1 ribosomal large subunit export from nucleus - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001233 334.0
BYDH1_k127_8411807_2 Domain in cystathionine beta-synthase and other proteins. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000288 264.0
BYDH1_k127_8411807_3 Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP K00763 - 6.3.4.21 0.000000000000000000000000000000000000000000000000000000005454 199.0
BYDH1_k127_8462583_0 Cobalamin synthesis protein cobW C-terminal domain - - - 7.463e-252 778.0
BYDH1_k127_8462583_1 Ammonium transporter K03320,K06580 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000169 548.0
BYDH1_k127_8462583_2 Protein of unknown function (DUF1826) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007721 359.0
BYDH1_k127_8462583_3 COG1629 Outer membrane receptor proteins, mostly Fe transport K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002738 340.0
BYDH1_k127_8462583_4 Belongs to the Fur family K09823 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002495 293.0
BYDH1_k127_8462583_5 HxlR-like helix-turn-helix - - - 0.0008264 43.0
BYDH1_k127_8528640_0 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation K00549 - 2.1.1.14 0.0 1492.0
BYDH1_k127_8528640_1 Bacterial regulatory helix-turn-helix protein, lysR family K03576 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006284 564.0
BYDH1_k127_8528640_2 PFAM TENA THI-4 protein Coenzyme PQQ biosynthesis protein C K06137 - 1.3.3.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001183 494.0
BYDH1_k127_8528640_3 Transposase IS200 like K07491 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002705 287.0
BYDH1_k127_8528640_4 membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002188 275.0
BYDH1_k127_8528640_5 Belongs to the glutaredoxin family. Monothiol subfamily K07390 - - 0.00000000000000000000000000000000000000000000000000000000000003936 214.0
BYDH1_k127_8528640_6 SIR2-like domain - - - 0.00000000000000000000000000000000000000000001748 163.0
BYDH1_k127_8528640_7 NAD+ binding - - - 0.000000131 54.0
BYDH1_k127_8545820_0 Cysteine-rich domain - - - 0.0 1306.0
BYDH1_k127_8545820_1 pilus assembly protein FimV K08086 - - 0.0 1237.0
BYDH1_k127_8545820_10 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001792 571.0
BYDH1_k127_8545820_11 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008328 532.0
BYDH1_k127_8545820_12 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 - 5.4.99.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002466 503.0
BYDH1_k127_8545820_13 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006627 415.0
BYDH1_k127_8545820_14 Ammonium transporter K03320,K06580 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004261 400.0
BYDH1_k127_8545820_15 Belongs to the TrpF family K01817 - 5.3.1.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000564 395.0
BYDH1_k127_8545820_16 Sporulation related domain K03749 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001429 352.0
BYDH1_k127_8545820_17 CNP1-like family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000075 309.0
BYDH1_k127_8545820_18 Colicin V production K03558 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001657 299.0
BYDH1_k127_8545820_19 Rubrerythrin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006851 287.0
BYDH1_k127_8545820_2 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 0.0 998.0
BYDH1_k127_8545820_20 Transposase DDE domain - - - 0.0000000000000000000000008275 103.0
BYDH1_k127_8545820_3 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 6.259e-300 921.0
BYDH1_k127_8545820_4 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 GO:0000162,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0042802,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.2.1.20 1.04e-261 806.0
BYDH1_k127_8545820_5 Belongs to the folylpolyglutamate synthase family K11754 - 6.3.2.12,6.3.2.17 1.777e-260 805.0
BYDH1_k127_8545820_6 Nucleoside H+ symporter K05820 - - 6.36e-246 760.0
BYDH1_k127_8545820_7 Catalyzes the formation of L-homocysteine from O- succinyl-L-homoserine (OSHS) and hydrogen sulfide K01739,K10764 - 2.5.1.48 4.372e-243 752.0
BYDH1_k127_8545820_8 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 2.496e-239 740.0
BYDH1_k127_8545820_9 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 GO:0003674,GO:0003824,GO:0003862,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006551,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009098,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.85 8.628e-214 665.0
BYDH1_k127_8697775_0 Acyltransferase family - - - 2.356e-218 679.0
BYDH1_k127_8697775_1 Prolyl oligopeptidase family K06889 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008028 441.0
BYDH1_k127_8697775_2 Uncharacterized protein family, UPF0114 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001302 388.0
BYDH1_k127_8697775_3 Belongs to the CinA family K03743 - 3.5.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002059 323.0
BYDH1_k127_8697775_4 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902,K08692 - 6.2.1.5,6.2.1.9 0.000000000000000000000000000000000000000000000000000007115 189.0
BYDH1_k127_8716696_0 alpha-ribazole phosphatase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003174 319.0
BYDH1_k127_8716696_1 HNH nucleases - - - 0.0000000000000000000000000000000000000000000000000001021 194.0
BYDH1_k127_8716696_10 TIGRFAM Nucleotidyltransferase substrate binding protein, HI0074 - - - 0.0000879 45.0
BYDH1_k127_8716696_2 PFAM Nucleotidyltransferase - - - 0.000000000000000000000000000000000000003554 149.0
BYDH1_k127_8716696_3 YoeB-like toxin of bacterial type II toxin-antitoxin system - - - 0.000000000000000000000000000000000000003644 147.0
BYDH1_k127_8716696_4 Antitoxin component of a toxin-antitoxin (TA) module - - - 0.00000000000000000000000000000000000004254 143.0
BYDH1_k127_8716696_5 Antitoxin component of a toxin-antitoxin (TA) module - - - 0.0000000000000000000000000000000000768 134.0
BYDH1_k127_8716696_6 TIGRFAM Nucleotidyltransferase substrate binding protein, HI0074 - - - 0.00000000000000000000000000000001105 128.0
BYDH1_k127_8716696_7 HAD-hyrolase-like - - - 0.00000000000000000004866 90.0
BYDH1_k127_8716696_8 NnrS protein K07234 - - 0.0000000000000000008738 85.0
BYDH1_k127_8737215_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 1.606e-320 983.0
BYDH1_k127_8737215_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 6.685e-293 900.0
BYDH1_k127_8737215_10 TolA C-terminal K03646 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001 524.0
BYDH1_k127_8737215_11 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001039 489.0
BYDH1_k127_8737215_12 transcriptional regulatory protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001633 459.0
BYDH1_k127_8737215_13 MotA TolQ ExbB proton channel K03562 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001061 430.0
BYDH1_k127_8737215_14 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0008144,GO:0016829,GO:0016840,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0046872,GO:0046983,GO:0048037,GO:0050662,GO:0051536,GO:0051539,GO:0051540,GO:1901681,GO:1904047 4.3.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001902 429.0
BYDH1_k127_8737215_15 Belongs to the BI1 family K19416 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000422 399.0
BYDH1_k127_8737215_16 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) K06920 - 6.3.4.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004324 400.0
BYDH1_k127_8737215_17 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002565 372.0
BYDH1_k127_8737215_18 Cytochrome P460 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000455 353.0
BYDH1_k127_8737215_19 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001671 343.0
BYDH1_k127_8737215_2 Involved in the TonB-independent uptake of proteins K03641 - - 2.852e-273 842.0
BYDH1_k127_8737215_20 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 - 3.1.22.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002398 322.0
BYDH1_k127_8737215_21 Belongs to the ompA family K03640 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005538 321.0
BYDH1_k127_8737215_22 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003263 305.0
BYDH1_k127_8737215_23 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008703 286.0
BYDH1_k127_8737215_24 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02109 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001924 281.0
BYDH1_k127_8737215_25 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001523 273.0
BYDH1_k127_8737215_26 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002892 260.0
BYDH1_k127_8737215_27 Biopolymer transport protein ExbD TolR K03560 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000009835 246.0
BYDH1_k127_8737215_28 ATP synthase I chain K02116 - - 0.0000000000000000000000000000000000000000000000000000000000004544 212.0
BYDH1_k127_8737215_29 4-hydroxybenzoyl-CoA thioesterase K07107 - - 0.000000000000000000000000000000000000000000000000000000000004967 208.0
BYDH1_k127_8737215_3 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042 - 2.3.1.157,2.7.7.23 4.466e-259 803.0
BYDH1_k127_8737215_30 - - - - 0.000000000000000000000000000000000000000000000000000000000005689 209.0
BYDH1_k127_8737215_31 Aldolase K01633 - 1.13.11.81,4.1.2.25,5.1.99.8 0.00000000000000000000000000000000000000000000000000000000002282 207.0
BYDH1_k127_8737215_32 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000008691 196.0
BYDH1_k127_8737215_33 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 - - 0.000000000000000000000000000000000000000000000005192 172.0
BYDH1_k127_8737215_34 Protein of unknown function (DUF3460) - - - 0.00000000000000000000000000002424 117.0
BYDH1_k127_8737215_35 - - - - 0.0000000000000000000000005489 105.0
BYDH1_k127_8737215_36 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 0.000000000000548 68.0
BYDH1_k127_8737215_37 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 0.000000000118 62.0
BYDH1_k127_8737215_38 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 0.0000007365 52.0
BYDH1_k127_8737215_4 Belongs to the thiolase family K00626 - 2.3.1.9 1.542e-239 743.0
BYDH1_k127_8737215_5 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 7.036e-212 659.0
BYDH1_k127_8737215_6 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 - 2.3.1.234 1.592e-205 641.0
BYDH1_k127_8737215_7 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008564 553.0
BYDH1_k127_8737215_8 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001297 542.0
BYDH1_k127_8737215_9 Short-chain dehydrogenase reductase SDR - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001032 534.0
BYDH1_k127_8918228_0 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002138 452.0
BYDH1_k127_8918228_1 Glycyl-tRNA synthetase K01878 - 6.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000533 266.0
BYDH1_k127_9008191_0 Belongs to the helicase family. UvrD subfamily K03582 - 3.1.11.5 0.0 2023.0
BYDH1_k127_9008191_1 PD-(D/E)XK nuclease superfamily K01144 - 3.1.11.5 2.377e-259 820.0
BYDH1_k127_9137750_0 SMART ATPase, AAA type, core K06158 - - 0.0 996.0
BYDH1_k127_9187020_0 Purine nucleoside phosphorylase which is highly specific for 6-oxopurine nucleosides. Cleaves guanosine or inosine to respective bases and sugar-1-phosphate molecules. Involved in purine salvage K00772,K03815 - 2.4.2.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003122 479.0
BYDH1_k127_9187020_1 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 - 6.5.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001316 421.0
BYDH1_k127_9187020_2 Phosphoribosyl transferase domain K00760 - 2.4.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001115 310.0
BYDH1_k127_9187020_3 serine-type aminopeptidase activity K14475 - - 0.00000000329 66.0
BYDH1_k127_9193122_0 Histidine kinase K03407 GO:0003674,GO:0005488,GO:0005515,GO:0019904 2.7.13.3 0.0 1270.0
BYDH1_k127_9193122_1 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor - - - 1.517e-311 958.0
BYDH1_k127_9193122_10 TIGRFAM Diguanylate cyclase K13590 - 2.7.7.65 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003332 477.0
BYDH1_k127_9193122_11 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001061 397.0
BYDH1_k127_9193122_12 Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis K03411 - 3.5.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002059 393.0
BYDH1_k127_9193122_13 NlpC/P60 family K13695,K19303 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005047 315.0
BYDH1_k127_9193122_14 PFAM CheW-like protein K03408 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003139 306.0
BYDH1_k127_9193122_15 Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella K02406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002214 276.0
BYDH1_k127_9193122_16 PFAM Signal transduction response regulator, receiver K03413 - - 0.000000000000000000000000000000000000000000000000000000000000000000009696 233.0
BYDH1_k127_9193122_17 Domain of unknown function (DUF4389) - - - 0.0000000000000000000000000000000000000000000000000000000179 198.0
BYDH1_k127_9193122_18 PFAM Transposase, IS4-like K07481 - - 0.0000000000000000000002728 98.0
BYDH1_k127_9193122_19 Regulator of peptidoglycan synthesis that is essential for the function of penicillin-binding protein 1B (PBP1b) K07337 - - 0.00000000000002276 79.0
BYDH1_k127_9193122_2 SMART Diguanylate cyclase K13590 - 2.7.7.65 7.521e-307 946.0
BYDH1_k127_9193122_20 - - - - 0.00000000000009991 72.0
BYDH1_k127_9193122_23 - - - - 0.0000002018 53.0
BYDH1_k127_9193122_3 Sulfatase K01130 - 3.1.6.1 4.033e-280 867.0
BYDH1_k127_9193122_4 Cytochrome c554 and c-prime - - - 4.863e-264 834.0
BYDH1_k127_9193122_5 PFAM Chemotaxis methyl-accepting receptor, signalling K03406,K03776,K05874 - - 1.73e-250 784.0
BYDH1_k127_9193122_6 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 1.033e-218 680.0
BYDH1_k127_9193122_7 Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP K00575 - 2.1.1.80 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001281 587.0
BYDH1_k127_9193122_8 HDOD domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001931 569.0
BYDH1_k127_9193122_9 Protein of unknown function - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003929 578.0
BYDH1_k127_9193462_0 Domain of Unknown Function (DUF748) - - - 0.0 1815.0
BYDH1_k127_9193462_1 Catalyzes cross-linking of the peptidoglycan cell wall at the division septum K03587 - 3.4.16.4 0.0 1115.0
BYDH1_k127_9193462_10 Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily K01834 - 5.4.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004461 473.0
BYDH1_k127_9193462_11 endonuclease III K01247 - 3.2.2.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009959 439.0
BYDH1_k127_9193462_12 Uracil DNA glycosylase superfamily K03649 - 3.2.2.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004596 310.0
BYDH1_k127_9193462_13 Peptidyl-prolyl cis-trans isomerase K01802,K03772 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004073 298.0
BYDH1_k127_9193462_14 Belongs to the MraZ family K03925 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004767 297.0
BYDH1_k127_9193462_15 Protein of unknown function (DUF454) K09790 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002432 287.0
BYDH1_k127_9193462_16 Histidine triad (HIT) protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000797 279.0
BYDH1_k127_9193462_17 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic K03586 - - 0.0000000000000000000000000000000000000000000000000003243 185.0
BYDH1_k127_9193462_2 Domain of unknown function (DUF4139) - - - 3.759e-290 893.0
BYDH1_k127_9193462_3 PFAM Aminotransferase, class V K04487 - 2.8.1.7 1.449e-229 713.0
BYDH1_k127_9193462_4 response regulator containing a CheY-like receiver - - - 3.825e-221 688.0
BYDH1_k127_9193462_5 fatty acid desaturase - - - 6.561e-219 680.0
BYDH1_k127_9193462_6 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 2.475e-200 625.0
BYDH1_k127_9193462_7 VanZ like family - - - 9.899e-196 613.0
BYDH1_k127_9193462_8 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 - 2.1.1.199 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001133 573.0
BYDH1_k127_9193462_9 PFAM Nucleotidyl transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001523 475.0
BYDH1_k127_927334_0 DnaJ molecular chaperone homology domain - - - 2.087e-214 668.0
BYDH1_k127_927334_1 Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate K01807 - 5.3.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000165 426.0
BYDH1_k127_927334_2 Plays a role in the regulation of phosphate uptake K02039 - - 0.000000000000000000000000000000000000000000000000003028 183.0
BYDH1_k127_9395048_0 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 0.0 1175.0
BYDH1_k127_9395048_1 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 3.489e-268 828.0
BYDH1_k127_9395048_10 Putative regulatory protein - - - 0.000000000000000000000000000000000000000002575 157.0
BYDH1_k127_9395048_11 tigrfam pep-cterm - - - 0.0000000000000000000000000000000000003371 145.0
BYDH1_k127_9395048_12 FR47-like protein - - - 0.0000000000000699 71.0
BYDH1_k127_9395048_13 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.0000000006137 61.0
BYDH1_k127_9395048_2 Belongs to the 'phage' integrase family. XerC subfamily K03733 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003597 556.0
BYDH1_k127_9395048_3 PFAM Ammonia monooxygenase particulate methane monooxygenase, subunit C K10946 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003007 551.0
BYDH1_k127_9395048_4 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008837,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016053,GO:0016853,GO:0016854,GO:0016855,GO:0019752,GO:0036361,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0047661,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.1.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000596 534.0
BYDH1_k127_9395048_5 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 - 3.4.25.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003839 333.0
BYDH1_k127_9395048_6 Protein of unknown function, DUF484 K09921 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007478 292.0
BYDH1_k127_9395048_7 Nudix hydrolase K08310 - 3.6.1.67 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006407 274.0
BYDH1_k127_9395048_8 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001836 255.0
BYDH1_k127_9395048_9 FR47-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000001607 214.0
BYDH1_k127_9399644_0 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 6.314e-217 676.0
BYDH1_k127_9399644_1 TIGRFAM Phage SPO1 DNA polymerase-related protein K21929 - 3.2.2.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003641 467.0
BYDH1_k127_9399644_10 - - - - 0.00000000000000008324 79.0
BYDH1_k127_9399644_11 - - - - 0.000000000000002472 75.0
BYDH1_k127_9399644_2 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) K00991,K12506 - 2.7.7.60,4.6.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007489 441.0
BYDH1_k127_9399644_3 PFAM Peptidase M22, glycoprotease K14742 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008938 436.0
BYDH1_k127_9399644_4 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007426 347.0
BYDH1_k127_9399644_5 This enzyme acetylates the N-terminal alanine of ribosomal protein S18 K03789,K14742 - 2.3.1.128 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003153 300.0
BYDH1_k127_9399644_6 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770,K12506 - 2.7.7.60,4.6.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008491 274.0
BYDH1_k127_9399644_8 - - - - 0.000000000000000000000000003612 111.0
BYDH1_k127_9399644_9 - - - - 0.00000000000000000000005733 97.0
BYDH1_k127_9488419_0 DinB superfamily - - - 0.0 1436.0
BYDH1_k127_9488419_1 SNARE associated Golgi protein - - - 0.0 1347.0
BYDH1_k127_9488419_10 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K00170 - 1.2.7.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005882 494.0
BYDH1_k127_9488419_11 Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001709 444.0
BYDH1_k127_9488419_12 2-oxoacid acceptor oxidoreductase, gamma subunit, pyruvate 2-ketoisovalerate K00172 - 1.2.7.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003174 397.0
BYDH1_k127_9488419_13 Predicted periplasmic protein (DUF2092) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002698 355.0
BYDH1_k127_9488419_14 Belongs to the ompA family K03286 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002362 308.0
BYDH1_k127_9488419_15 Uncharacterized protein conserved in bacteria (DUF2064) K09931 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002808 296.0
BYDH1_k127_9488419_16 Las17-binding protein actin regulator - - - 0.000000000000000000000000000000000000000000000000000000000001446 214.0
BYDH1_k127_9488419_17 Las17-binding protein actin regulator - - - 0.0000000000000000000000000000000000000000000000000000003409 199.0
BYDH1_k127_9488419_18 - - - - 0.00000000000000000000000000000000000000000000000000003145 196.0
BYDH1_k127_9488419_19 - - - - 0.00000000000000000000000000000000000002637 150.0
BYDH1_k127_9488419_2 Sulfatase K01130 - 3.1.6.1 0.0 1225.0
BYDH1_k127_9488419_20 Protein of unknown function (DUF3313) - - - 0.000000000000000000000000000000001208 139.0
BYDH1_k127_9488419_21 Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis K03688 - - 0.00000000000000000000000000004183 116.0
BYDH1_k127_9488419_22 Lysozyme inhibitor LprI - - - 0.00000000000000000000001008 102.0
BYDH1_k127_9488419_24 ISXO2-like transposase domain - - - 0.0005102 43.0
BYDH1_k127_9488419_3 AMP-binding enzyme C-terminal domain K00666 - - 3.368e-260 812.0
BYDH1_k127_9488419_4 PFAM aminotransferase, class I K00842,K14155 - 4.4.1.8 1.701e-240 746.0
BYDH1_k127_9488419_5 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) K07755 - 2.1.1.137 3.662e-232 719.0
BYDH1_k127_9488419_6 Radical SAM superfamily - - - 8.102e-205 638.0
BYDH1_k127_9488419_7 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg K00174 - 1.2.7.11,1.2.7.3 4.466e-194 614.0
BYDH1_k127_9488419_8 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase K00261 - 1.4.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005016 530.0
BYDH1_k127_9488419_9 ydiK promoter presents a PurR sequence, suggesting that its expression is purine-regulated - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001066 508.0
BYDH1_k127_9650401_0 PFAM Prenyltransferase squalene oxidase K06045 - 4.2.1.129,5.4.99.17 0.0 1306.0
BYDH1_k127_9650401_1 lipid A ABC exporter family, fused ATPase and inner membrane subunits K06147 - - 0.0 1034.0
BYDH1_k127_9650401_2 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 1.451e-263 817.0
BYDH1_k127_9650401_3 MlaA lipoprotein K04754 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000418 474.0
BYDH1_k127_9650401_4 MotA TolQ ExbB proton channel K03561 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001284 385.0
BYDH1_k127_9650401_5 Phosphorylase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000346 250.0
BYDH1_k127_9650401_6 Protein of unknown function (DUF423) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000004188 241.0
BYDH1_k127_9650401_7 - - - - 0.0000000000000000000000000000000006089 135.0
BYDH1_k127_9650401_8 TIGRFAM methyltransferase FkbM family - - - 0.000000000000000000000000000006834 130.0
BYDH1_k127_9672321_0 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007 - 2.7.9.2 0.0 1506.0
BYDH1_k127_9672321_1 lipid kinase activity - - - 0.0 1170.0
BYDH1_k127_9672321_10 acetyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001558 478.0
BYDH1_k127_9672321_11 MotA/TolQ/ExbB proton channel family K03561 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006115 413.0
BYDH1_k127_9672321_12 Haemolysin-type calcium-binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002968 439.0
BYDH1_k127_9672321_13 PFAM Glycoside hydrolase, family 19, catalytic K03791 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003689 369.0
BYDH1_k127_9672321_14 Protein of unknown function (DUF2959) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006676 358.0
BYDH1_k127_9672321_15 YaeQ - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001259 347.0
BYDH1_k127_9672321_16 Belongs to the ompA family K03286 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003255 339.0
BYDH1_k127_9672321_17 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002364 279.0
BYDH1_k127_9672321_18 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004811 273.0
BYDH1_k127_9672321_19 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004873 249.0
BYDH1_k127_9672321_2 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 - - 0.0 1120.0
BYDH1_k127_9672321_20 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.00000000000000000000000000000000000000000000000000000002905 201.0
BYDH1_k127_9672321_21 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.000000000000000000000000000000000000000000000000000000231 223.0
BYDH1_k127_9672321_22 Biopolymer transport protein ExbD/TolR K03559 - - 0.00000000002752 69.0
BYDH1_k127_9672321_3 Belongs to the CDP-alcohol phosphatidyltransferase class-I family - - - 5.314e-264 814.0
BYDH1_k127_9672321_4 PFAM Permease YjgP YjgQ K11720 - - 7.548e-204 639.0
BYDH1_k127_9672321_5 PFAM Permease YjgP YjgQ K07091 - - 1.159e-203 636.0
BYDH1_k127_9672321_6 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003963 539.0
BYDH1_k127_9672321_7 Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the phosphoenolpyruvate synthase (PEPS) by catalyzing its phosphorylation dephosphorylation K09773 - 2.7.11.33,2.7.4.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008724 532.0
BYDH1_k127_9672321_8 MobA-like NTP transferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006581 509.0
BYDH1_k127_9672321_9 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002488 494.0
BYDH1_k127_9672665_0 Regulator of K conductance, C-terminal - - - 0.0 1101.0
BYDH1_k127_9672665_1 Belongs to the RNase T2 family K01166 - 3.1.27.1 2.612e-202 633.0
BYDH1_k127_9672665_2 Cytochrome P460 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005392 415.0
BYDH1_k127_9672665_3 Protein of unknown function (DUF3617) - - - 0.000000003717 58.0
BYDH1_k127_9712475_0 ABC-type transport system involved in lysophospholipase L1 biosynthesis permease component K02004 - - 0.0 1554.0
BYDH1_k127_9712475_1 Involved in the biosynthesis of porphyrin-containing compound - - - 8.617e-253 781.0
BYDH1_k127_9712475_2 Responsible for synthesis of pseudouridine from uracil K06179 - 5.4.99.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001376 606.0
BYDH1_k127_9712475_3 PFAM formate nitrite transporter K02598,K21993 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001849 505.0
BYDH1_k127_9712475_4 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005334 463.0
BYDH1_k127_9712475_5 ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007503 436.0
BYDH1_k127_9712475_6 GDSL-like Lipase/Acylhydrolase family K10804 - 3.1.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009183 333.0
BYDH1_k127_9715270_0 PFAM DNA-repair protein, UmuC-like K03502 - - 2.977e-263 812.0
BYDH1_k127_9715270_1 PFAM Exonuclease, RNase T DNA polymerase III K02342 - 2.7.7.7 4.863e-198 619.0
BYDH1_k127_9715270_2 PFAM Peptidase S24 S26A S26B, conserved region K03503 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001032 358.0
BYDH1_k127_9715270_3 RNase H - - - 0.00000000000000000000001888 100.0
BYDH1_k127_9778948_0 Competence protein ComEC Rec2 K02238 - - 0.0 1430.0
BYDH1_k127_9778948_1 PFAM Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase K13924 - 2.1.1.80,3.1.1.61 3.32e-321 987.0
BYDH1_k127_9778948_2 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000002737 194.0
BYDH1_k127_9833544_0 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002429 473.0
BYDH1_k127_9833544_1 Restriction endonuclease, type I, EcoRI, R subunit Type III, Res subunit, N-terminal K01153 - 3.1.21.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002451 304.0
BYDH1_k127_9833544_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000001806 219.0
BYDH1_k127_995956_0 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 GO:0000105,GO:0003674,GO:0003824,GO:0004399,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019752,GO:0030145,GO:0034641,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046872,GO:0046914,GO:0052803,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.23 1.231e-263 814.0
BYDH1_k127_995956_1 tRNA rRNA methyltransferase, SpoU K03437 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000385 518.0
BYDH1_k127_995956_2 Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity K00765 - 2.4.2.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000002007 256.0
BYDH1_k127_9981635_0 ROK family K00845,K00847,K00884 - 2.7.1.2,2.7.1.4,2.7.1.59 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001579 552.0
BYDH1_k127_9981635_2 Transposase IS116/IS110/IS902 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000001057 245.0
BYDH1_k127_9981635_3 PFAM Transposase, IS4-like K07481 - - 0.000000000000008515 75.0
BYDH1_k127_9981635_4 DsrE/DsrF-like family - - - 0.00001543 51.0