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Overview

ID MAG00161
Name BYDH1_bin.35
Sample SMP0004
Taxonomy
Kingdom Bacteria
Phylum Pseudomonadota
Class Gammaproteobacteria
Order SG8-11
Family SG8-11
Genus UBA6921
Species
Assembly information
Completeness (%) 82.69
Contamination (%) 0.93
GC content (%) 59.0
N50 (bp) 8,954
Genome size (bp) 2,234,612

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes2203

Gene name Description KEGG GOs EC E-value Score Sequence
BYDH1_k127_10037443_0 P-type ATPase K17686 - 3.6.3.54 1.097e-281 883.0
BYDH1_k127_10037443_1 PFAM HNH endonuclease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000252 239.0
BYDH1_k127_10037443_2 Ethanolamine utilisation protein EutQ K06995 - - 0.000000000000000000000000000000000001056 140.0
BYDH1_k127_10037443_3 Cytochrome c - - - 0.00000000000000000000000000000000137 133.0
BYDH1_k127_10037443_4 Lipid A 3-O-deacylase (PagL) - - - 0.00000000000000000000000005222 122.0
BYDH1_k127_10037443_5 Protein of unknown function (DUF1090) - - - 0.0000000001188 66.0
BYDH1_k127_10081726_0 Virulence factor BrkB K07058 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001521 310.0
BYDH1_k127_10081726_1 PFAM Phosphatidylethanolamine-binding protein K06910 - - 0.0000000000000000000000000000000000000000000000000000000000000000001322 233.0
BYDH1_k127_10081726_2 Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates K16785 - - 0.0000000000002202 76.0
BYDH1_k127_10081726_4 Nitroreductase family - - - 0.00008702 45.0
BYDH1_k127_10081726_5 P pilus assembly Cpx signaling pathway, periplasmic inhibitor zinc-resistance associated protein K06006 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006457,GO:0008150,GO:0009987,GO:0010033,GO:0014070,GO:0030288,GO:0030313,GO:0031975,GO:0042221,GO:0042597,GO:0044464,GO:0050896,GO:0051082,GO:0061077,GO:1990507 - 0.0002368 47.0
BYDH1_k127_1008419_0 Dehydrogenase E1 component K00164 - 1.2.4.2 0.0 1140.0
BYDH1_k127_1008419_1 The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) K00658 - 2.3.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001624 473.0
BYDH1_k127_1008419_2 E3 component of 2-oxoglutarate dehydrogenase complex K00382 - 1.8.1.4 0.000000000000000000000000000000000000000000000000000000001374 207.0
BYDH1_k127_10120280_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 1.458e-242 763.0
BYDH1_k127_10120280_1 Peptidase family M28 - - - 3.148e-198 632.0
BYDH1_k127_10120280_2 oxidoreductase FAD NAD(P)-binding domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000249 406.0
BYDH1_k127_10120280_3 MafB19-like deaminase - - - 0.0000000000000000000000000000000000000008662 153.0
BYDH1_k127_10198898_0 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001656 355.0
BYDH1_k127_10198898_1 Type II secretory pathway, component ExeA - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001019 299.0
BYDH1_k127_10198898_2 Phosphate transport system permease protein K02038 - - 0.0000000000000000000000000000000000000000000119 163.0
BYDH1_k127_10198898_3 Plays a role in the regulation of phosphate uptake K02039 - - 0.0000000000000000000000000000000000000000001615 169.0
BYDH1_k127_10198898_4 CBS domain containing protein K03699 - - 0.0000000000000000000000000000000000000000004392 164.0
BYDH1_k127_10255548_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.0 1219.0
BYDH1_k127_10255548_1 COG4664 TRAP-type mannitol chloroaromatic compound transport system, large permease component - - - 1.449e-213 672.0
BYDH1_k127_10255548_10 Modulates the synthesis of GlmS, by affecting the processing and stability of the regulatory small RNA GlmZ. When glucosamine-6-phosphate (GlcN6P) concentrations are high in the cell, RapZ binds GlmZ and targets it to cleavage by RNase E. Consequently, GlmZ is inactivated and unable to activate GlmS synthesis. Under low GlcN6P concentrations, RapZ is sequestered and inactivated by an other regulatory small RNA, GlmY, preventing GlmZ degradation and leading to synthesis of GlmS K06958 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005515,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0034641,GO:0042802,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001418 318.0
BYDH1_k127_10255548_11 Unwinds DNA duplexes with 3' to 5' polarity with respect to the bound strand and initiates unwinding most effectively when a single-stranded region is present K03657 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001456 313.0
BYDH1_k127_10255548_12 Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr) K06023 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001065 302.0
BYDH1_k127_10255548_13 F plasmid transfer operon, TraF, protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001763 313.0
BYDH1_k127_10255548_14 Endonuclease Exonuclease Phosphatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001573 299.0
BYDH1_k127_10255548_15 Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate K03270 GO:0000271,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0006629,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0008781,GO:0009058,GO:0009059,GO:0009103,GO:0009987,GO:0016051,GO:0016311,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0016791,GO:0019143,GO:0033692,GO:0034637,GO:0034645,GO:0042578,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0070567,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 3.1.3.45 0.000000000000000000000000000000000000000000000000000000000000000000000000008808 255.0
BYDH1_k127_10255548_16 TRAP-type mannitol chloroaromatic compound transport system, small permease component - - - 0.00000000000000000000000000000000000000000000000000000000000003446 219.0
BYDH1_k127_10255548_17 Thiol disulfide interchange protein K03673 - - 0.00000000000000000000000000000000000000000000000000000000006433 211.0
BYDH1_k127_10255548_18 Necessary for normal cell division and for the maintenance of normal septation K03978 - - 0.000000000000000000000000000000000000000000000000000000003322 205.0
BYDH1_k127_10255548_19 Cyclic nucleotide-monophosphate binding domain - - - 0.00000000000000000000000000000000000000000000000000001493 192.0
BYDH1_k127_10255548_2 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03092 GO:0000976,GO:0001067,GO:0001130,GO:0001216,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0006355,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0019219,GO:0019222,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032991,GO:0032993,GO:0043565,GO:0044212,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902680,GO:1903506,GO:1903508,GO:1990837,GO:2000112,GO:2001141 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001706 567.0
BYDH1_k127_10255548_20 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K02806 - - 0.0000000000000000000000000000000000000002435 154.0
BYDH1_k127_10255548_21 system, fructose subfamily IIA component K02821 - 2.7.1.194 0.0000000000000000000000000000000000001492 145.0
BYDH1_k127_10255548_22 Sigma 54 modulation protein K05808 - - 0.000000000000000000000000000000006937 130.0
BYDH1_k127_10255548_23 COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) K04762 - - 0.00000000000000000000000000000001775 130.0
BYDH1_k127_10255548_24 Phosphotransferase System K11189 - - 0.0000000000000000000000000000000538 126.0
BYDH1_k127_10255548_25 PFAM cytochrome c, class I K08738 - - 0.000000000000000000000000000001571 123.0
BYDH1_k127_10255548_26 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.0000000000000000000000006407 107.0
BYDH1_k127_10255548_27 Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. Facilitates the transfer of LPS from the inner membrane to the periplasmic protein LptA. Could be a docking site for LptA K11719 - - 0.000000000000000000000002352 114.0
BYDH1_k127_10255548_28 F plasmid transfer operon, TraF, protein - - - 0.00000000000000000000002404 112.0
BYDH1_k127_10255548_29 Protein of unknown function (DUF2782) - - - 0.0000000000000000000001653 102.0
BYDH1_k127_10255548_3 Part of the tripartite ATP-independent periplasmic (TRAP) transport system - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002951 512.0
BYDH1_k127_10255548_30 Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm K09774 GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006810,GO:0006869,GO:0008150,GO:0009279,GO:0010876,GO:0015920,GO:0016020,GO:0017089,GO:0019867,GO:0030288,GO:0030312,GO:0030313,GO:0031975,GO:0033036,GO:0042597,GO:0042802,GO:0044462,GO:0044464,GO:0046836,GO:0051179,GO:0051234,GO:0071702,GO:0071944,GO:1901264 - 0.000000000000000002981 92.0
BYDH1_k127_10255548_4 Arabinose 5-phosphate isomerase K06041 - 5.3.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000391 441.0
BYDH1_k127_10255548_5 Belongs to the LOG family K06966 - 3.2.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002288 378.0
BYDH1_k127_10255548_6 Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate K03179 - 2.5.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003165 363.0
BYDH1_k127_10255548_7 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K08483 - 2.7.3.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003339 366.0
BYDH1_k127_10255548_8 PFAM ABC transporter K06861 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003032 342.0
BYDH1_k127_10255548_9 PFAM Fructosamine - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004714 341.0
BYDH1_k127_10257642_0 Oxidizes proline to glutamate for use as a carbon and nitrogen source K13821 - 1.2.1.88,1.5.5.2 1.158e-197 632.0
BYDH1_k127_10257642_1 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004176 357.0
BYDH1_k127_10257642_2 PFAM Formylglycine-generating sulfatase enzyme K18912 - 1.14.99.50 0.000000000000000000000000000000000000000000000000000000000000000000000000004703 265.0
BYDH1_k127_10257642_3 PFAM Formylglycine-generating sulfatase enzyme - - - 0.00000000000000000000000000000000000000000000001134 184.0
BYDH1_k127_10313186_0 PFAM EAL domain K21025 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000151 526.0
BYDH1_k127_10313186_1 Belongs to the peptidase M48B family K03799 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005114 443.0
BYDH1_k127_10313186_2 TIGRFAM lysine 2,3-aminomutase YodO family protein K01843,K19810 - 5.4.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007095 370.0
BYDH1_k127_10313186_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000234 273.0
BYDH1_k127_10313186_4 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02621 GO:0000819,GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006259,GO:0006265,GO:0006276,GO:0006725,GO:0006807,GO:0006996,GO:0007049,GO:0007059,GO:0007062,GO:0008150,GO:0008152,GO:0009330,GO:0009987,GO:0016020,GO:0016043,GO:0019897,GO:0019898,GO:0022402,GO:0030541,GO:0032991,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0046483,GO:0051276,GO:0071103,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0097159,GO:0098813,GO:1901360,GO:1901363 - 0.0000000000000000000000000000000000000000000000000005974 188.0
BYDH1_k127_10331328_0 ABC transporter K06158 - - 2.942e-233 738.0
BYDH1_k127_10331328_1 Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) K01626 - 2.5.1.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004223 522.0
BYDH1_k127_10331328_2 Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA K12297 - 2.1.1.173,2.1.1.264 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001476 514.0
BYDH1_k127_10331328_3 Specifically methylates the adenine in position 2030 of 23S rRNA K07115 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0008988,GO:0009451,GO:0009987,GO:0010467,GO:0015976,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036307,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.266 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003042 335.0
BYDH1_k127_10331328_4 Sodium Bile acid symporter family K03453 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003182 302.0
BYDH1_k127_10331328_5 Protein of unknown function (DUF3301) - - - 0.000000000000000000000001002 107.0
BYDH1_k127_10331328_6 - - - - 0.000000000000000005993 87.0
BYDH1_k127_10331328_7 small protein containing a coiled-coil domain - - - 0.000000009122 60.0
BYDH1_k127_10331328_8 Pfam:DUF461 - - - 0.00000002064 57.0
BYDH1_k127_10344084_0 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005403 388.0
BYDH1_k127_10344084_1 cheY-homologous receiver domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001757 328.0
BYDH1_k127_10344084_2 Thiamine biosynthesis protein (ThiI) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003569 256.0
BYDH1_k127_10344084_3 - - - - 0.000000000000000000000000000000000000000000000004099 179.0
BYDH1_k127_10344084_4 Bacterial extracellular solute-binding proteins, family 3 K02030 - - 0.000000000000000000000000000000000000000000007032 175.0
BYDH1_k127_10344084_5 COG0642 Signal transduction histidine kinase - - - 0.000000000000000000000001654 105.0
BYDH1_k127_10379478_0 PFAM Transketolase central region K00162,K21417 - 1.2.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002048 574.0
BYDH1_k127_10379478_1 Dehydrogenase E1 component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000278 520.0
BYDH1_k127_10379478_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001068 342.0
BYDH1_k127_10379478_3 2OG-Fe(II) oxygenase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000005538 222.0
BYDH1_k127_10379478_4 - - - - 0.0000000000000000000000000000000000000000000000000001139 195.0
BYDH1_k127_10379478_5 Sel1-like repeats. - - - 0.000000000000000000000000000000000000000000000002188 177.0
BYDH1_k127_10379478_6 e3 binding domain K00382 - 1.8.1.4 0.000000000000000000000000000000000005278 139.0
BYDH1_k127_10379478_7 - - - - 0.000000000000000000000000000004916 127.0
BYDH1_k127_10379478_8 Cytochrome c - - - 0.00000000000000000000000019 108.0
BYDH1_k127_10384834_0 PFAM regulator of chromosome condensation, RCC1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005463 377.0
BYDH1_k127_10384834_1 Flavodoxin domain K00230 - 1.3.5.3 0.000000000000000000000000000000000000000000000000000000000000002091 223.0
BYDH1_k127_10384834_2 ABC-type sugar transport system periplasmic component - - - 0.00000000000000000000000000000000000000000000000000003044 213.0
BYDH1_k127_10384834_3 NfeD-like C-terminal, partner-binding K07340 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000005423 160.0
BYDH1_k127_10384834_4 protein conserved in bacteria - - - 0.0000000000000000000000000000009261 129.0
BYDH1_k127_10384834_5 prohibitin homologues - - - 0.000000000000000000000005707 102.0
BYDH1_k127_10384834_6 domain, Protein K00703,K07082 - 2.4.1.21 0.000000000000000002171 89.0
BYDH1_k127_10384834_7 amine dehydrogenase activity - - - 0.000000000003335 80.0
BYDH1_k127_10427910_0 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003875 495.0
BYDH1_k127_10427910_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003814 300.0
BYDH1_k127_10427910_2 CHASE4 domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002545 287.0
BYDH1_k127_10427910_3 PFAM Fibronectin, type III domain - - - 0.0000000000000000000000000000000000000000000001558 190.0
BYDH1_k127_10427910_4 COG0666 FOG Ankyrin repeat K06867 - - 0.000000000000000000000000000000000000000001762 176.0
BYDH1_k127_10427910_5 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.0000000000000000000000000003883 113.0
BYDH1_k127_10427910_6 FOG TPR repeat, SEL1 subfamily K07126 - - 0.000000000001423 81.0
BYDH1_k127_10427910_7 Domain of unknown function K20276 - - 0.000051 56.0
BYDH1_k127_10458150_0 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006114 458.0
BYDH1_k127_10458150_1 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004105 280.0
BYDH1_k127_10458150_2 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001073 277.0
BYDH1_k127_10458150_3 PFAM MucB RseB K03598 - - 0.00000000000000000000000000000000000000000000000000000000000002134 227.0
BYDH1_k127_10458150_4 PFAM Anti sigma-E protein RseA K03597 - - 0.0000000000000000000004925 102.0
BYDH1_k127_10462679_0 COG2274 ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain K11004 - - 6.901e-295 920.0
BYDH1_k127_10462679_1 type I secretion membrane fusion protein, HlyD family K02022,K11003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009135 376.0
BYDH1_k127_10462679_2 MazG-like family - - - 0.000000000000000000000000000000000000006486 147.0
BYDH1_k127_10462679_3 Protein of unknown function (DUF503) K09764 - - 0.000000000000008559 79.0
BYDH1_k127_1057959_0 DNA photolyase K01669 - 4.1.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005402 552.0
BYDH1_k127_1057959_1 helix_turn_helix, mercury resistance - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001682 285.0
BYDH1_k127_1057959_2 Belongs to the glutathione peroxidase family - - - 0.0000000000000000000000000000000000000000000000000000000000002645 216.0
BYDH1_k127_1057959_3 - - - - 0.0000000000000000000000000000000000000000000000000001449 193.0
BYDH1_k127_10617741_0 Oxidoreductase FAD-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001084 349.0
BYDH1_k127_10617741_1 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000003792 264.0
BYDH1_k127_10617741_2 PFAM methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001648 254.0
BYDH1_k127_10617741_3 Bacterial-like globin K06886 - - 0.00000000000000000000000000000000000000000000000000000000003283 206.0
BYDH1_k127_10617741_4 Histidine kinase-like ATPases - - - 0.0000000000000000000000000000000000000003736 154.0
BYDH1_k127_10617741_5 PilZ domain - - - 0.00000001977 64.0
BYDH1_k127_10673807_0 Phage late control gene D protein (GPD) K11904 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005051 584.0
BYDH1_k127_10714376_0 AcrB/AcrD/AcrF family K07787 - - 0.0 1420.0
BYDH1_k127_10714376_1 Acts as a magnesium transporter K06213 - - 1.045e-216 681.0
BYDH1_k127_10714376_10 Sodium Bile acid symporter family K03453 - - 0.0000000000001284 72.0
BYDH1_k127_10714376_11 Copper binding periplasmic protein CusF - - - 0.0000000001607 66.0
BYDH1_k127_10714376_2 Patatin-like phospholipase K07001 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007476 426.0
BYDH1_k127_10714376_3 HlyD membrane-fusion protein of T1SS K07798 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008908 347.0
BYDH1_k127_10714376_4 Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000002889 184.0
BYDH1_k127_10714376_5 long-chain fatty acid transporting porin activity K07267 - - 0.0000000000000000000000000000000000000000008525 171.0
BYDH1_k127_10714376_6 protein SCO1 SenC PrrC, involved in biogenesis of respiratory and photosynthetic systems K07152 - - 0.0000000000000000000000000007117 123.0
BYDH1_k127_10714376_7 COG0226 ABC-type phosphate transport system, periplasmic component - - - 0.000000000000000000000004816 106.0
BYDH1_k127_10714376_8 - - - - 0.00000000000000000001934 95.0
BYDH1_k127_10714376_9 Copper chaperone PCu(A)C K09796 - - 0.0000000000000000826 87.0
BYDH1_k127_10746078_0 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 - 4.1.99.17 0.0 1039.0
BYDH1_k127_10746078_1 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01581,K01586 - 4.1.1.17,4.1.1.20 5.043e-209 659.0
BYDH1_k127_10746078_2 peptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006573 549.0
BYDH1_k127_10746078_3 ATP-grasp domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004184 422.0
BYDH1_k127_10746078_4 COG2897 Rhodanese-related sulfurtransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000002687 241.0
BYDH1_k127_10746078_6 Coenzyme PQQ synthesis protein D (PqqD) - - - 0.0000000000000000001218 92.0
BYDH1_k127_10845_0 TIGRFAM penicillin-binding protein, 1A K05366 - 2.4.1.129,3.4.16.4 4.266e-289 909.0
BYDH1_k127_10845_1 Belongs to the sulfate adenylyltransferase family K00958 - 2.7.7.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008816 586.0
BYDH1_k127_10845_10 Sel1-like repeats. K07126 - - 0.00000156 56.0
BYDH1_k127_10845_2 TIGRFAM type IV pilus assembly protein PilM K02662 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007965 461.0
BYDH1_k127_10845_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002316 246.0
BYDH1_k127_10845_4 Pilus assembly protein, PilO K02664 - - 0.00000000000000000000000000000000000000000000000000000000000000004215 229.0
BYDH1_k127_10845_5 COG3166 Tfp pilus assembly protein PilN K02663 - - 0.0000000000000000000000000000000000000000000000009029 183.0
BYDH1_k127_10845_6 pilus assembly protein PilP K02665 - - 0.0000000000000000000000000000000000000000000009787 172.0
BYDH1_k127_10845_7 MoaE protein K03635 - 2.8.1.12 0.00000000000000000000000000000000000000000003275 166.0
BYDH1_k127_10845_8 type IV pilus secretin PilQ K02666 - - 0.0000000000002365 78.0
BYDH1_k127_10845_9 - - - - 0.000000000002844 67.0
BYDH1_k127_10953289_0 Pyridine nucleotide-disulphide oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005941 569.0
BYDH1_k127_10953289_1 - - - - 0.00000000000000000000000001748 113.0
BYDH1_k127_10953289_2 Predicted membrane protein (DUF2214) K08983 - - 0.0000000000000000000004796 101.0
BYDH1_k127_10953289_3 Belongs to the SlyX family K03745 - - 0.0000000003452 63.0
BYDH1_k127_10957828_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 GO:0000715,GO:0000716,GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006283,GO:0006289,GO:0006355,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0008094,GO:0008150,GO:0008152,GO:0009889,GO:0009987,GO:0010468,GO:0010556,GO:0015616,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019219,GO:0019222,GO:0019899,GO:0031323,GO:0031326,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0043175,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051252,GO:0051276,GO:0051716,GO:0060255,GO:0065007,GO:0070063,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:0140097,GO:1901360,GO:1901363,GO:1903506,GO:2000112,GO:2001141 - 3.347e-292 910.0
BYDH1_k127_10957828_1 Belongs to the citrate synthase family K01647 - 2.3.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001048 555.0
BYDH1_k127_10957828_2 Transglutaminase/protease-like homologues - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001382 477.0
BYDH1_k127_10957828_3 PFAM N-formylglutamate amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002202 351.0
BYDH1_k127_10957828_4 Involved in chromosome partitioning - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002468 317.0
BYDH1_k127_10957828_5 membrane protein, TerC - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003187 317.0
BYDH1_k127_10995004_0 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009898,GO:0009987,GO:0016020,GO:0016310,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019538,GO:0019843,GO:0019897,GO:0019898,GO:0022613,GO:0031234,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0035639,GO:0036094,GO:0036211,GO:0042254,GO:0042274,GO:0043021,GO:0043024,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0044877,GO:0046777,GO:0070181,GO:0071704,GO:0071840,GO:0071944,GO:0097159,GO:0097367,GO:0098552,GO:0098562,GO:1901265,GO:1901363,GO:1901564 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005764 394.0
BYDH1_k127_10995004_1 PFAM Aminoglycoside phosphotransferase K07102 - 2.7.1.221 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001563 341.0
BYDH1_k127_10995004_2 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 - 2.6.99.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004897 339.0
BYDH1_k127_10995004_3 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 GO:0000287,GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016072,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019899,GO:0022613,GO:0032296,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043167,GO:0043169,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363 3.1.26.3 0.00000000000000000000000000000000000000000000000000000000000000000000000001405 256.0
BYDH1_k127_10995004_4 Involved in DNA repair and RecF pathway recombination K03584 - - 0.000000000000000000000000000000000000000000000000000000000000001283 226.0
BYDH1_k127_10995004_5 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.000000000000000000000000000000001135 137.0
BYDH1_k127_10995004_6 Domain of unknown function (DUF4845) - - - 0.00004167 49.0
BYDH1_k127_11004586_0 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 3.502e-290 900.0
BYDH1_k127_11004586_1 Protein tyrosine kinase K12132 - 2.7.11.1 3.007e-216 702.0
BYDH1_k127_11004586_10 Regulatory protein, FmdB family - - - 0.000000000000000000000000000000003953 130.0
BYDH1_k127_11004586_2 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004436 316.0
BYDH1_k127_11004586_3 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000001581 242.0
BYDH1_k127_11004586_4 Serine/threonine phosphatases, family 2C, catalytic domain K20074 - 3.1.3.16 0.0000000000000000000000000000000000000000000000000000000000000000002666 244.0
BYDH1_k127_11004586_5 Putative zinc- or iron-chelating domain K06940 - - 0.00000000000000000000000000000000000000000000000000000000001441 216.0
BYDH1_k127_11004586_6 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 - 3.1.22.4 0.00000000000000000000000000000000000000000000000000000297 197.0
BYDH1_k127_11004586_7 Haloacid dehalogenase-like hydrolase K20881 - 3.1.3.5 0.00000000000000000000000000000000000000000000000000001041 192.0
BYDH1_k127_11004586_8 (FHA) domain - - - 0.0000000000000000000000000000000000000000000000000003555 193.0
BYDH1_k127_11004586_9 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000000000000000000000001335 184.0
BYDH1_k127_11080432_0 PFAM Cyclopropane-fatty-acyl-phospholipid synthase K00574 - 2.1.1.79 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004488 514.0
BYDH1_k127_11080432_1 Protein of unknown function (DUF1365) K09701 - - 0.0000000000000000000000000000000000000000000000000000000000000000000003128 243.0
BYDH1_k127_11080432_2 Domain of unknown function DUF302 - - - 0.00000000000000000000000000000000000000000008851 166.0
BYDH1_k127_11080432_3 COG0790 FOG TPR repeat, SEL1 subfamily K07126 - - 0.0000000000000000000381 104.0
BYDH1_k127_11080432_4 Beta propeller domain - - - 0.0000002061 59.0
BYDH1_k127_11083230_0 PrkA family serine protein kinase K07180 - - 0.0 1113.0
BYDH1_k127_11083230_1 SpoVR family - - - 2.148e-252 785.0
BYDH1_k127_11083230_10 Protein of unknown function (DUF3135) - - - 0.0000000000000000000000003612 109.0
BYDH1_k127_11083230_11 Glycosyltransferase - - - 0.0000000000000001772 88.0
BYDH1_k127_11083230_12 TIGRFAM flagellar basal-body rod protein FlgF K02391 - - 0.000000000008874 66.0
BYDH1_k127_11083230_13 COG2747 Negative regulator of flagellin synthesis (anti-sigma28 factor) K02398 - - 0.0000000004208 64.0
BYDH1_k127_11083230_14 Outer membrane protein beta-barrel domain - - - 0.0000013 58.0
BYDH1_k127_11083230_15 Flagellar biosynthesis protein flgN K02399 - - 0.000006589 54.0
BYDH1_k127_11083230_16 Recombinase zinc beta ribbon domain - - - 0.0001929 48.0
BYDH1_k127_11083230_2 Belongs to the UPF0229 family K09786 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002977 538.0
BYDH1_k127_11083230_3 basal body rod protein K02390 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003693 425.0
BYDH1_k127_11083230_4 Two component signalling adaptor domain K03415 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003687 361.0
BYDH1_k127_11083230_5 Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP K00575 - 2.1.1.80 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005226 304.0
BYDH1_k127_11083230_6 Belongs to the flagella basal body rod proteins family K02388 - - 0.0000000000000000000000000000000000000000000000000001774 188.0
BYDH1_k127_11083230_7 Required for flagellar hook formation. May act as a scaffolding protein K02389 - - 0.00000000000000000000000000000000000000000000000001002 188.0
BYDH1_k127_11083230_8 Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body K02387 - - 0.000000000000000000000000000000002579 134.0
BYDH1_k127_11083230_9 Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P-ring assembly K02386 - - 0.00000000000000000000000000000004699 134.0
BYDH1_k127_11131670_0 NADH-quinone oxidoreductase K00336 - 1.6.5.3 1.585e-286 901.0
BYDH1_k127_11131670_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 6.164e-252 780.0
BYDH1_k127_11131670_10 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 - 1.6.5.3 0.0000000000000000000000000000000000000003164 151.0
BYDH1_k127_11131670_11 NADH-Ubiquinone oxidoreductase (complex I) chain 5 L domain protein K00341 - 1.6.5.3 0.00000000000000000000000000006268 117.0
BYDH1_k127_11131670_12 PFAM Preprotein translocase SecG subunit K03075 - - 0.00000000000000000000000001047 115.0
BYDH1_k127_11131670_13 Domain of unknown function (DUF4266) - - - 0.000000000000000001075 87.0
BYDH1_k127_11131670_14 Protein of unknown function (DUF3570) - - - 0.000002731 53.0
BYDH1_k127_11131670_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 - 1.6.5.3 3.387e-224 700.0
BYDH1_k127_11131670_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003799 535.0
BYDH1_k127_11131670_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002039 330.0
BYDH1_k127_11131670_5 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003726 325.0
BYDH1_k127_11131670_6 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002927 300.0
BYDH1_k127_11131670_7 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001177 287.0
BYDH1_k127_11131670_8 Belongs to the complex I subunit 6 family K00339 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000009995 256.0
BYDH1_k127_11131670_9 NADH dehydrogenase K00334 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000006159 235.0
BYDH1_k127_11147407_0 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 - 6.3.4.5 4.645e-229 715.0
BYDH1_k127_11147407_1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation K00382 - 1.8.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001437 337.0
BYDH1_k127_11147407_2 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002478 337.0
BYDH1_k127_11147407_3 Domain of unknown function (DUF1841) - - - 0.0000000000000000000000000000000000000000006265 163.0
BYDH1_k127_11147407_4 Catalyzes the phosphorolysis of diverse nucleosides, yielding D-ribose 1-phosphate and the respective free bases. Can use uridine, adenosine, guanosine, cytidine, thymidine, inosine and xanthosine as substrates. Also catalyzes the reverse reactions K09913 GO:0003674,GO:0003824,GO:0004731,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016154,GO:0016740,GO:0016757,GO:0016763,GO:0044424,GO:0044444,GO:0044464 2.4.2.1,2.4.2.2 0.00000000000000000000000000000005507 128.0
BYDH1_k127_11147407_5 Transcriptional regulator, Crp Fnr family - - - 0.000000000000000000000000004075 116.0
BYDH1_k127_11167811_0 5'-nucleotidase, C-terminal domain K01119 - 3.1.3.6,3.1.4.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003455 350.0
BYDH1_k127_11167811_1 PFAM sodium calcium exchanger membrane region K07300 - - 0.00000000000000009904 81.0
BYDH1_k127_11242102_0 nitrogen regulation protein K07712 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 1.472e-227 712.0
BYDH1_k127_11242102_1 signal transduction histidine kinase K07708 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002156 397.0
BYDH1_k127_11242102_2 ATPase activity, coupled to transmembrane movement of substances - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005832 287.0
BYDH1_k127_11242102_4 Prokaryotic N-terminal methylation motif - - - 0.00000000000000000000000000006052 125.0
BYDH1_k127_11280959_0 ImcF-related N-terminal domain K11891 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002377 377.0
BYDH1_k127_11280959_1 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE K11893 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002069 338.0
BYDH1_k127_11280959_2 Type VI secretion system protein DotU K11892 - - 0.000000000000000000000000000000000000000003671 163.0
BYDH1_k127_11280959_3 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 - - - 0.00000000000000000001653 100.0
BYDH1_k127_11398034_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0 1381.0
BYDH1_k127_11398034_1 Sulfate transporter antisigma-factor antagonist STAS - - - 1.24e-204 654.0
BYDH1_k127_11398034_10 - - - - 0.00000000000004106 78.0
BYDH1_k127_11398034_2 response to heat K07090 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004107 462.0
BYDH1_k127_11398034_3 PFAM ATP-binding region ATPase domain protein K07645 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001641 386.0
BYDH1_k127_11398034_4 His Kinase A (phospho-acceptor) domain K02484,K07645 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002179 367.0
BYDH1_k127_11398034_5 Transcriptional regulatory protein, C terminal K02483 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000222 311.0
BYDH1_k127_11398034_6 Transcriptional regulatory protein, C terminal K02483 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003814 310.0
BYDH1_k127_11398034_7 Phosphate acyltransferases K00655 - 2.3.1.51 0.00000000000000000000000000000000000000000000000000000000000000000000001035 249.0
BYDH1_k127_11398034_8 Diguanylate phosphodiesterase - - - 0.000000000000000000000000000000000000000000000000000008649 195.0
BYDH1_k127_11398034_9 Ankyrin repeat - - - 0.0000000000000000004765 93.0
BYDH1_k127_11496213_0 Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide K07147 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002702 418.0
BYDH1_k127_11496213_1 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 GO:0000027,GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005515,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006996,GO:0008150,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0022607,GO:0022613,GO:0022618,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0032794,GO:0034622,GO:0035639,GO:0036094,GO:0042254,GO:0042255,GO:0042273,GO:0043021,GO:0043022,GO:0043023,GO:0043167,GO:0043168,GO:0043933,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:0097159,GO:0097216,GO:0097367,GO:1901265,GO:1901363 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008702 390.0
BYDH1_k127_11496213_10 - - - - 0.0000000000000000000009765 102.0
BYDH1_k127_11496213_11 Domain of unknown function (DUF4266) - - - 0.000000000000000115 82.0
BYDH1_k127_11496213_12 Putative zinc-finger - - - 0.000000000726 69.0
BYDH1_k127_11496213_2 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009479 342.0
BYDH1_k127_11496213_3 Protein of unknown function (DUF3570) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002155 310.0
BYDH1_k127_11496213_4 Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain K17247 - - 0.000000000000000000000000000000000000000000000000000000000000001687 226.0
BYDH1_k127_11496213_5 PFAM Adenylate cyclase K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000001323 209.0
BYDH1_k127_11496213_6 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000000000000000004406 191.0
BYDH1_k127_11496213_7 Major facilitator superfamily K08218 - - 0.000000000000000000000000000000000000000000000000005524 186.0
BYDH1_k127_11496213_8 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.000000000000000000000000000000000000000004253 160.0
BYDH1_k127_11496213_9 PEP-CTERM motif - - - 0.00000000000000000000000000815 118.0
BYDH1_k127_11593507_0 Belongs to the binding-protein-dependent transport system permease family K11961 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001055 585.0
BYDH1_k127_11593507_1 TIGRFAM urea ABC transporter, ATP-binding protein UrtD K11962 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000447 407.0
BYDH1_k127_11593507_2 ABC transporter K11963 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002715 357.0
BYDH1_k127_11593507_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000003082 221.0
BYDH1_k127_11593507_4 Cytotoxic translational repressor of toxin-antitoxin stability system - - - 0.000000000000000000000000000000005825 130.0
BYDH1_k127_11616479_0 Glucose / Sorbosone dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002894 616.0
BYDH1_k127_11616479_1 PFAM EAL domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005053 348.0
BYDH1_k127_11616479_2 Peptidoglycan-binding domain 1 protein K02450 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0016020,GO:0044424,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001025 333.0
BYDH1_k127_11616479_3 UPF0114 protein - - - 0.00000000000000000000000000000000000000000000000000000000000000009657 227.0
BYDH1_k127_11616479_4 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000000000000000000000000000000000000005358 170.0
BYDH1_k127_11616479_5 MazG-like family - - - 0.00000000000000000000341 94.0
BYDH1_k127_11639044_0 PFAM Type II secretion system protein E K02669 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001841 577.0
BYDH1_k127_11639044_1 Dynamin family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001453 583.0
BYDH1_k127_11639044_2 Exodeoxyribonuclease III K01142 - 3.1.11.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001157 385.0
BYDH1_k127_11639044_3 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005442 310.0
BYDH1_k127_11639044_4 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001058 303.0
BYDH1_k127_11639044_5 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001343 291.0
BYDH1_k127_11639044_6 integral membrane protein K02221 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000007148 173.0
BYDH1_k127_11639044_7 oligosaccharyl transferase activity - - - 0.000000000000000000000000000000000005649 154.0
BYDH1_k127_11639044_8 Belongs to the UPF0235 family K09131 - - 0.00000000000000000000000001513 111.0
BYDH1_k127_11732361_0 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 - 4.2.1.20 3.087e-214 671.0
BYDH1_k127_11732361_1 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000896 434.0
BYDH1_k127_11732361_2 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003499 350.0
BYDH1_k127_11732361_3 Belongs to the folylpolyglutamate synthase family K11754 - 6.3.2.12,6.3.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006199 301.0
BYDH1_k127_11732361_4 Belongs to the TrpF family K01817 - 5.3.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007149 268.0
BYDH1_k127_11732361_5 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 GO:0000049,GO:0001522,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363 5.4.99.12 0.000000000000000000000000000000000000000000000000000007288 193.0
BYDH1_k127_11746489_0 ABC transporter, phosphonate, periplasmic substrate-binding protein K02044 - - 0.000000000000000000000000000000000000000000000000001001 194.0
BYDH1_k127_11746489_1 signal transduction histidine - - - 0.00000000000000000000000000000000000000000002524 170.0
BYDH1_k127_11746489_2 Bacterial protein of unknown function (DUF883) - - - 0.0000000000000000000000003319 109.0
BYDH1_k127_11746489_3 Late competence development protein ComFB - - - 0.0000000000000000001428 97.0
BYDH1_k127_11746489_4 Putative Actinobacterial Holin-X, holin superfamily III - - - 0.000000000004889 73.0
BYDH1_k127_11746489_5 - - - - 0.00000000003266 68.0
BYDH1_k127_11752055_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K01139 - 2.7.6.5,3.1.7.2 7.288e-300 937.0
BYDH1_k127_11752055_1 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 GO:0003674,GO:0003678,GO:0003724,GO:0003824,GO:0004003,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006807,GO:0006996,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0008186,GO:0009314,GO:0009379,GO:0009628,GO:0009987,GO:0010501,GO:0016043,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032392,GO:0032508,GO:0032991,GO:0033202,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048476,GO:0050896,GO:0051276,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:0140098,GO:1901360,GO:1902494 3.6.4.12 3.16e-269 846.0
BYDH1_k127_11752055_2 5'-nucleotidase, C-terminal domain K11751,K17224 - 3.1.3.5,3.6.1.45 1.27e-235 741.0
BYDH1_k127_11752055_3 Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor K00833 - 2.6.1.62 9.283e-217 680.0
BYDH1_k127_11752055_4 endoribonuclease L-PSP - - - 0.000000000000000000000000000000000000000000000000002647 186.0
BYDH1_k127_11752055_5 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 - 2.7.7.6 0.000000000000000000000006686 103.0
BYDH1_k127_117870_0 Belongs to the beta-ketoacyl-ACP synthases family K00647 - 2.3.1.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000271 615.0
BYDH1_k127_117870_1 sulphate transporter K03321 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008283 580.0
BYDH1_k127_117870_10 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 0.0000000000000000000000000000000000005803 150.0
BYDH1_k127_117870_11 MOSC domain - - - 0.000000000000000000000000000003096 122.0
BYDH1_k127_117870_12 acylphosphatase K01512 - 3.6.1.7 0.000000000000000000000769 100.0
BYDH1_k127_117870_13 SMART Tetratricopeptide - - - 0.00000000001378 71.0
BYDH1_k127_117870_14 pilus assembly protein FimV K08086 - - 0.000000009501 66.0
BYDH1_k127_117870_2 Belongs to the glucose-6-phosphate 1-epimerase family K01792 - 5.1.3.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003634 346.0
BYDH1_k127_117870_3 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007817 331.0
BYDH1_k127_117870_4 HDOD domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002914 323.0
BYDH1_k127_117870_5 Necessary for the introduction of cis unsaturation into fatty acids. Catalyzes the dehydration of (3R)-3-hydroxydecanoyl- ACP to E-(2)-decenoyl-ACP and then its isomerization to Z-(3)- decenoyl-ACP. Can catalyze the dehydratase reaction for beta- hydroxyacyl-ACPs with saturated chain lengths up to 16 0, being most active on intermediate chain length K01716 - 4.2.1.59,5.3.3.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002314 291.0
BYDH1_k127_117870_6 thiolester hydrolase activity K06889,K07397 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003211 290.0
BYDH1_k127_117870_7 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000003413 229.0
BYDH1_k127_117870_8 - - - - 0.0000000000000000000000000000000000000000000000000000000004433 207.0
BYDH1_k127_117870_9 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.000000000000000000000000000000000000000000000000000002544 193.0
BYDH1_k127_11823842_0 of ABC transporters with duplicated ATPase - - - 1.04e-275 856.0
BYDH1_k127_11823842_1 Sigma-70 factor, region 1.2 K03087 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001741 425.0
BYDH1_k127_11823842_10 PFAM Smr - - - 0.0000000000000000000000000000000003199 139.0
BYDH1_k127_11823842_11 Protein of unknown function (DUF498/DUF598) - - - 0.0000000000000000000000007997 116.0
BYDH1_k127_11823842_12 DNA-sulfur modification-associated - - - 0.000000009769 67.0
BYDH1_k127_11823842_2 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008024 374.0
BYDH1_k127_11823842_3 Responsible for synthesis of pseudouridine from uracil- 13 in transfer RNAs K06176 GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0016070,GO:0016853,GO:0016866,GO:0034641,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101 339.0
BYDH1_k127_11823842_4 PFAM Aminotransferase class I and II K14261 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003221 299.0
BYDH1_k127_11823842_5 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 GO:0003674,GO:0003824,GO:0004719,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0010340,GO:0016740,GO:0016741,GO:0019538,GO:0030091,GO:0032259,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0051998,GO:0071704,GO:0140096,GO:1901564 2.1.1.77 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001459 277.0
BYDH1_k127_11823842_6 COG2897 Rhodanese-related sulfurtransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001131 253.0
BYDH1_k127_11823842_7 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000001282 249.0
BYDH1_k127_11823842_8 peptidase K06194 - - 0.0000000000000000000000000000000000000000000000000000000000389 214.0
BYDH1_k127_11823842_9 Cyclic nucleotide-monophosphate binding domain - - - 0.000000000000000000000000000000000000000000002351 169.0
BYDH1_k127_12041702_0 PAS fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008516 389.0
BYDH1_k127_12041702_1 Protein of unknown function (DUF3365) - - - 0.000000000000000000000000000000000000000000000002946 184.0
BYDH1_k127_12041702_2 Bacterial extracellular solute-binding proteins, family 3 K02030 - - 0.00000000000000000000000000000000000000004186 168.0
BYDH1_k127_12041702_3 PFAM YicC-like - - - 0.00000000000000000000000000001081 124.0
BYDH1_k127_12109758_0 Carbohydrate phosphorylase K00688 - 2.4.1.1 1.521e-237 743.0
BYDH1_k127_12109758_1 Fatty acid desaturase K10255 - 1.14.19.23,1.14.19.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002551 465.0
BYDH1_k127_12109758_2 phosphoglycerate mutase activity K01834 GO:0003674,GO:0003824,GO:0004619,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006109,GO:0006139,GO:0006140,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009894,GO:0009987,GO:0010675,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016866,GO:0016868,GO:0017144,GO:0018130,GO:0019219,GO:0019220,GO:0019222,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0031323,GO:0031329,GO:0032787,GO:0034248,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0043455,GO:0043456,GO:0043470,GO:0043471,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046538,GO:0046700,GO:0046939,GO:0050789,GO:0050794,GO:0051171,GO:0051174,GO:0051186,GO:0051188,GO:0051193,GO:0051196,GO:0055086,GO:0060255,GO:0062012,GO:0065007,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0080090,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1902031 5.4.2.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002736 323.0
BYDH1_k127_12109758_3 part of a sulfur-relay system K11179 - - 0.0000000000000000000000000000000008277 136.0
BYDH1_k127_12111522_0 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002852 533.0
BYDH1_k127_12111522_1 - - - - 0.000000000000000000000000000000000000000000000000000000000001932 212.0
BYDH1_k127_12111522_2 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases - - - 0.000000000000000000000000000000000000000000000000000000000002242 239.0
BYDH1_k127_12111522_3 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000001055 182.0
BYDH1_k127_12111522_4 - - - - 0.00000000000000000000000001717 119.0
BYDH1_k127_12111522_5 von Willebrand factor (vWF) type A domain - - - 0.00006103 55.0
BYDH1_k127_12287754_0 Belongs to the 5'-nucleotidase family K01119 - 3.1.3.6,3.1.4.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003535 378.0
BYDH1_k127_12348134_0 TIGRFAM dihydroorotase, multifunctional complex type K01465 - 3.5.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002509 522.0
BYDH1_k127_12348134_1 Belongs to the ATCase OTCase family K00609 - 2.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002449 490.0
BYDH1_k127_12348134_2 Type II/IV secretion system protein K02670 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002641 483.0
BYDH1_k127_12348134_3 Oxidoreductase FAD-binding domain K02823 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001059 424.0
BYDH1_k127_12348134_4 Belongs to the UPF0301 (AlgH) family K07735 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000000000006677 256.0
BYDH1_k127_12348134_5 phosphoribosyltransferase K02825 - 2.4.2.9 0.000000000000000000000000000000000000000000000000000000000000000001383 231.0
BYDH1_k127_12348134_6 PFAM Gram-negative bacterial tonB protein K03832 - - 0.0000000000000000000000000000000000000000000000004001 183.0
BYDH1_k127_12348134_7 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 - - 0.00000000000000000000000000000000000002947 147.0
BYDH1_k127_12348134_8 twitching motility protein K02669 - - 0.00000004283 54.0
BYDH1_k127_1235625_0 general secretion pathway protein G K02456 - - 0.000000000000000000000000000000000000000000000000000000000000000278 222.0
BYDH1_k127_1235625_1 Rhomboid family - - - 0.00000000000000000000000000000000000002257 150.0
BYDH1_k127_1235625_2 Type II secretion system (T2SS), protein J - - - 0.0000000000000000000000000000000000001206 149.0
BYDH1_k127_1235625_3 Diguanylate cyclase, GGDEF domain - - - 0.00000000000000000000000000000004874 135.0
BYDH1_k127_1235625_4 General secretion pathway protein I K02458 GO:0002790,GO:0006810,GO:0008104,GO:0008150,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0032940,GO:0033036,GO:0042886,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0071702,GO:0071705 - 0.0000000000000000000003629 100.0
BYDH1_k127_1235625_5 Adenylate cyclase K05851 GO:0003674,GO:0003824,GO:0004016,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006171,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009187,GO:0009190,GO:0009259,GO:0009260,GO:0009975,GO:0009987,GO:0016829,GO:0016849,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046058,GO:0046390,GO:0046483,GO:0052652,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.6.1.1 0.0000000000000000001061 90.0
BYDH1_k127_1235625_6 general secretion pathway protein K02457 GO:0002790,GO:0006810,GO:0008104,GO:0008150,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0032940,GO:0033036,GO:0042886,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0071702,GO:0071705 - 0.00000000000006131 79.0
BYDH1_k127_12367739_0 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002625 491.0
BYDH1_k127_12367739_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008035 440.0
BYDH1_k127_12367739_2 Belongs to the UPF0176 family K07146 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001799 356.0
BYDH1_k127_12367739_3 Outer membrane lipoprotein-sorting protein - - - 0.00000000000000000000000000000000002832 136.0
BYDH1_k127_12367739_4 Phospholipid methyltransferase - - - 0.00000000000000000000000000000002717 131.0
BYDH1_k127_12367739_5 Tetratricopeptide repeat - - - 0.000000000000000003855 87.0
BYDH1_k127_12400090_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 0.0 1304.0
BYDH1_k127_12400090_1 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 9.983e-220 686.0
BYDH1_k127_12400090_10 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly K03589 - - 0.00000000000000000000000001576 112.0
BYDH1_k127_12400090_11 Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase K09862 - - 0.00000000000000006062 83.0
BYDH1_k127_12400090_12 Protein of unknown function (DUF721) - - - 0.000000007697 63.0
BYDH1_k127_12400090_2 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001861 554.0
BYDH1_k127_12400090_3 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 - 2.3.1.1,2.3.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004442 503.0
BYDH1_k127_12400090_4 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K02535 - 3.5.1.108 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003164 482.0
BYDH1_k127_12400090_5 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003618 346.0
BYDH1_k127_12400090_6 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes K03574 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008413,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017110,GO:0030145,GO:0033554,GO:0034641,GO:0035539,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044715,GO:0044716,GO:0046483,GO:0046872,GO:0046914,GO:0047429,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:1901360 3.6.1.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000508 316.0
BYDH1_k127_12400090_7 Peptidase family M23 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004793 302.0
BYDH1_k127_12400090_8 Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity K18778 - - 0.00000000000000000000000000000000000000000000000000000000000000000000004743 250.0
BYDH1_k127_12400090_9 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 - 2.7.1.24 0.000000000000000000000000000000000000000000000000000000003612 205.0
BYDH1_k127_12409852_0 Glycosyltransferase like family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006412 315.0
BYDH1_k127_12409852_1 TIGRFAM Hydrolase, ortholog 1, exosortase system type 1 associated - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000198 311.0
BYDH1_k127_12409852_2 lipolytic protein G-D-S-L family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007267 300.0
BYDH1_k127_12409852_3 PFAM Orn DAP Arg decarboxylase 2 K01586 - 4.1.1.20 0.000000000000000000000000000000000000000002642 156.0
BYDH1_k127_1243639_0 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 7.012e-221 707.0
BYDH1_k127_1243639_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K03407 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004284 591.0
BYDH1_k127_1243639_2 Two component signalling adaptor domain K03408 - - 0.0000000000000000000000000000000000000000000000000000001418 200.0
BYDH1_k127_1243948_0 ABC transporter K15738 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000493 578.0
BYDH1_k127_1243948_1 Methyl-accepting chemotaxis protein K03406 - - 0.000000000000000000000000000000000000000000000000000001638 201.0
BYDH1_k127_1243948_2 Mycobacterial 4 TMS phage holin, superfamily IV K08972 - - 0.000000000000000000000000000693 120.0
BYDH1_k127_1243948_3 transmembrane signaling receptor activity - - - 0.000000000000000000009936 96.0
BYDH1_k127_12456765_0 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002029 516.0
BYDH1_k127_12456765_1 PFAM FAD dependent oxidoreductase K00111 - 1.1.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002313 457.0
BYDH1_k127_12456765_2 DMSO reductase anchor subunit (DmsC) K21309 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007809 413.0
BYDH1_k127_12456765_3 Dienelactone hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001502 327.0
BYDH1_k127_12456765_4 2OG-Fe(II) oxygenase - - - 0.00000000000000000000000000000000000000000000000000000000005995 210.0
BYDH1_k127_12456765_5 PFAM Glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.00000000000000000000000000001154 123.0
BYDH1_k127_12456765_6 Rieske [2Fe-2S] domain K05710 - - 0.000000000000000003133 88.0
BYDH1_k127_12456765_7 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein K21308 - - 0.00003522 46.0
BYDH1_k127_12469844_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00283 - 1.4.4.2 1.196e-248 775.0
BYDH1_k127_12469844_1 PFAM pfkB family carbohydrate kinase K00856 - 2.7.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008179 499.0
BYDH1_k127_12469844_2 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003249 282.0
BYDH1_k127_12469844_3 Glycine cleavage system P-protein K00282 - 1.4.4.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005524 273.0
BYDH1_k127_12469844_4 TIGRFAM alkylphosphonate utilization operon protein PhnA K06193 - - 0.0000000000000000000000000000000000000000000000000000001465 196.0
BYDH1_k127_12469844_5 Lipopolysaccharide kinase (Kdo/WaaP) family K11211 - 2.7.1.166 0.0000000000000000000000000000000000000000000000000000007816 201.0
BYDH1_k127_12469844_6 Recycling of diacylglycerol produced during the turnover of membrane phospholipid K00901 - 2.7.1.107 0.000000000000000000000000000000000000000005371 157.0
BYDH1_k127_12469844_7 protein conserved in bacteria - - - 0.000000000000000000003029 96.0
BYDH1_k127_12474742_0 Uncharacterized alpha/beta hydrolase domain (DUF2235) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005404 430.0
BYDH1_k127_12474742_1 Mitochondrial biogenesis AIM24 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001047 393.0
BYDH1_k127_12474742_2 COG1404 Subtilisin-like serine proteases K14645 - - 0.0000000000000000000000000000000000000000000000000000000000000000000003992 249.0
BYDH1_k127_12474742_3 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000002052 208.0
BYDH1_k127_12474742_4 - - - - 0.0000000001172 68.0
BYDH1_k127_12474742_5 Protein of unknown function (DUF2892) - - - 0.0001744 49.0
BYDH1_k127_12499574_0 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 - 1.1.1.23 2.65e-204 644.0
BYDH1_k127_12499574_1 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 1.457e-197 623.0
BYDH1_k127_12499574_10 BolA-like protein - - - 0.00000000000000000003915 93.0
BYDH1_k127_12499574_11 NTP binding protein (Contains STAS domain) K07122 - - 0.0000000000000871 75.0
BYDH1_k127_12499574_2 Aminotransferase class I and II K00817 GO:0000105,GO:0003674,GO:0003824,GO:0004400,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042802,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.6.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003174 448.0
BYDH1_k127_12499574_3 Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005198 426.0
BYDH1_k127_12499574_4 ABC transporter permease K02066 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005641 364.0
BYDH1_k127_12499574_5 imidazoleglycerol-phosphate dehydratase K01089,K01693 - 3.1.3.15,4.2.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004887 338.0
BYDH1_k127_12499574_6 Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity K00765 - 2.4.2.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002516 304.0
BYDH1_k127_12499574_7 MlaD protein K02067 - - 0.000000000000000000000000000000000000000000000000000000000003032 212.0
BYDH1_k127_12499574_8 PFAM ABC transporter K02065 - - 0.00000000000000000000000000000000000000000000000006105 179.0
BYDH1_k127_12499574_9 PFAM toluene tolerance K07323 - - 0.000000000000000000000000000000000000000000000002142 182.0
BYDH1_k127_1252849_0 Histidine kinase K07641 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003881 396.0
BYDH1_k127_1252849_1 Histidine kinase K20974 - 2.7.13.3 0.0000000000000000000000000004268 130.0
BYDH1_k127_1252849_2 Belongs to the ompA family K03640 GO:0005575,GO:0005623,GO:0008150,GO:0009279,GO:0009987,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031224,GO:0031230,GO:0031241,GO:0031246,GO:0031975,GO:0032153,GO:0044425,GO:0044462,GO:0044464,GO:0051301,GO:0071944,GO:0098552 - 0.0000000000000000002572 96.0
BYDH1_k127_12529154_0 Belongs to the MtfA family K09933 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003503 307.0
BYDH1_k127_12529154_1 diguanylate cyclase (GGDEF) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000009569 250.0
BYDH1_k127_12529154_2 DNA internalization-related competence protein ComEC Rec2 K02238 - - 0.0000000000000000000000000000000000000000000000000000000000000000001702 239.0
BYDH1_k127_12546517_0 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 2.483e-201 634.0
BYDH1_k127_12546517_1 AAA ATPase, central domain protein K07478 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007824 602.0
BYDH1_k127_12546517_2 Belongs to the ParA family K03609 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001084 404.0
BYDH1_k127_12546517_3 smart pdz dhr glgf - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000315 326.0
BYDH1_k127_12546517_4 PKHD-type hydroxylase K07336 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000102 274.0
BYDH1_k127_12546517_5 Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization K03610 - - 0.000000000000000000000000000000000000000000000000000000009254 209.0
BYDH1_k127_12546517_6 - - - - 0.00000000000000000000000000000000000000000000000000007421 195.0
BYDH1_k127_12546517_7 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 - - 0.00000000000000000000000000000000000000004675 156.0
BYDH1_k127_12546517_8 Uncharacterized ACR, COG1993 K09137 - - 0.000000000000000000000000000000005251 133.0
BYDH1_k127_12546517_9 Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell K03608 - - 0.0000000000000000000000000004825 115.0
BYDH1_k127_12643711_0 PFAM tRNA synthetase class II (G H P and S) K01892 - 6.1.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005412 572.0
BYDH1_k127_12643711_1 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 - 1.17.7.1,1.17.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005666 561.0
BYDH1_k127_12643711_10 Domain of unknown function (DUF4115) K15539 - - 0.000000000000000000000000006262 121.0
BYDH1_k127_12643711_11 Iron-sulphur cluster assembly - GO:0003674,GO:0004857,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006790,GO:0008150,GO:0008152,GO:0008198,GO:0009987,GO:0016043,GO:0016226,GO:0022607,GO:0030234,GO:0031163,GO:0043086,GO:0043167,GO:0043169,GO:0044085,GO:0044092,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0050790,GO:0051186,GO:0065007,GO:0065009,GO:0071840,GO:0098772 - 0.00001976 48.0
BYDH1_k127_12643711_2 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140101,GO:0140102,GO:1901360 2.1.1.192 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005154 479.0
BYDH1_k127_12643711_3 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K17713 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001108 313.0
BYDH1_k127_12643711_4 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001338 264.0
BYDH1_k127_12643711_5 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 GO:0003674,GO:0003824,GO:0004550,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006165,GO:0006220,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009132,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0019205,GO:0019637,GO:0034641,GO:0044237,GO:0044238,GO:0044281,GO:0044464,GO:0046483,GO:0046939,GO:0055086,GO:0071704,GO:0072521,GO:0072527,GO:1901360,GO:1901564 2.7.4.6 0.000000000000000000000000000000000000000000000000000000000000000257 223.0
BYDH1_k127_12643711_6 ferredoxin, 2Fe-2S K04755 - - 0.0000000000000000000000000000000000000000000000000005504 185.0
BYDH1_k127_12643711_7 type IV pilus biogenesis stability protein PilW K02656 - - 0.000000000000000000000000000000000000000000001368 178.0
BYDH1_k127_12643711_8 protein conserved in bacteria - GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0009897,GO:0009986,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0031233,GO:0044425,GO:0044459,GO:0044464,GO:0071575,GO:0071944,GO:0098552 - 0.0000000000000000000000000000000000000009563 156.0
BYDH1_k127_12643711_9 Fe-S assembly protein IscX - GO:0003674,GO:0004857,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006790,GO:0008150,GO:0008152,GO:0008198,GO:0009987,GO:0016043,GO:0016226,GO:0022607,GO:0030234,GO:0031163,GO:0043086,GO:0043167,GO:0043169,GO:0044085,GO:0044092,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0050790,GO:0051186,GO:0065007,GO:0065009,GO:0071840,GO:0098772 - 0.000000000000000000000000006074 112.0
BYDH1_k127_12729099_0 Polysaccharide chain length determinant protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002381 509.0
BYDH1_k127_12729099_1 PFAM Glycosyl transferase, group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005236 264.0
BYDH1_k127_12729099_2 Capsular exopolysaccharide family K08252,K16692 - 2.7.10.1 0.00000000000000000000000000000000000000000000000000000000000000000000000052 255.0
BYDH1_k127_12729099_3 Glycosyl transferase, family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000009986 228.0
BYDH1_k127_12729099_4 polysaccharide export protein K01991 - - 0.0000000000000000000000000000000000000000000002126 175.0
BYDH1_k127_12729099_5 - - - - 0.00000000000007114 78.0
BYDH1_k127_12729099_6 Protein conserved in bacteria - - - 0.0000000005552 71.0
BYDH1_k127_12750604_0 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 1.19e-261 817.0
BYDH1_k127_12750604_1 Diguanylate cyclase - - - 1.011e-204 666.0
BYDH1_k127_12750604_10 lactoylglutathione lyase activity - - - 0.00000000003637 69.0
BYDH1_k127_12750604_11 Acid phosphatase homologues - - - 0.00000006964 54.0
BYDH1_k127_12750604_2 Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme K02302 - 1.3.1.76,2.1.1.107,4.99.1.4 8.671e-199 629.0
BYDH1_k127_12750604_3 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001677 493.0
BYDH1_k127_12750604_4 PFAM glycosyl transferase family 39 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001939 428.0
BYDH1_k127_12750604_5 Bacterial regulatory helix-turn-helix protein, lysR family K13634 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007707 410.0
BYDH1_k127_12750604_6 Flagellar Assembly Protein A K09749 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001042 307.0
BYDH1_k127_12750604_7 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003697 261.0
BYDH1_k127_12750604_8 PFAM Lytic transglycosylase catalytic - - - 0.000000000000000000000000000000000000000000000000000000000001535 215.0
BYDH1_k127_12750604_9 - - - - 0.00000000000002704 76.0
BYDH1_k127_1302848_0 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP K02837 - - 1.259e-276 858.0
BYDH1_k127_1302848_1 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 2.511e-216 677.0
BYDH1_k127_1302848_10 Forms part of the polypeptide exit tunnel K02926 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008232 267.0
BYDH1_k127_1302848_11 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001628 250.0
BYDH1_k127_1302848_12 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.000000000000000000000000000000000000000000000000000000000000000000002949 235.0
BYDH1_k127_1302848_13 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 - - 0.00000000000000000000000000000000000000000000000000000000000000000002178 237.0
BYDH1_k127_1302848_14 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 - - 0.0000000000000000000000000000000000000000000000000000000000000004938 221.0
BYDH1_k127_1302848_15 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 GO:0000027,GO:0000049,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000008454 220.0
BYDH1_k127_1302848_16 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0097159,GO:1901363,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000007535 216.0
BYDH1_k127_1302848_17 Ribosomal protein L17 K02879 - - 0.000000000000000000000000000000000000000000000000000000006919 200.0
BYDH1_k127_1302848_18 Binds to the 23S rRNA K02876 - - 0.000000000000000000000000000000000000000000000000000000557 196.0
BYDH1_k127_1302848_19 Involved in the binding of tRNA to the ribosomes K02946 - - 0.000000000000000000000000000000000000000000000000000007831 190.0
BYDH1_k127_1302848_2 Sulphur transport K07112 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002937 520.0
BYDH1_k127_1302848_20 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009894,GO:0009987,GO:0010467,GO:0010468,GO:0010608,GO:0015935,GO:0016043,GO:0019219,GO:0019222,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0031323,GO:0031329,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043487,GO:0043488,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0061013,GO:0065003,GO:0065007,GO:0065008,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0080090,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903311,GO:1990904 - 0.0000000000000000000000000000000000000000000000000006516 186.0
BYDH1_k127_1302848_21 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 - - 0.00000000000000000000000000000000000000000000000001698 183.0
BYDH1_k127_1302848_22 Protein of unknown function (DUF1566) - - - 0.000000000000000000000000000000000000000000001498 178.0
BYDH1_k127_1302848_23 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit K02895 - - 0.000000000000000000000000000000000000000000001505 167.0
BYDH1_k127_1302848_24 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 - - 0.000000000000000000000000000000000000000000003835 165.0
BYDH1_k127_1302848_25 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000003338 158.0
BYDH1_k127_1302848_26 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 - - 0.0000000000000000000000000000000000000000598 156.0
BYDH1_k127_1302848_27 General secretion pathway protein C K02452 - - 0.000000000000000000000000000000000000000493 163.0
BYDH1_k127_1302848_28 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042221,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046677,GO:0050896,GO:0065003,GO:0070181,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000009565 128.0
BYDH1_k127_1302848_29 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000005088 125.0
BYDH1_k127_1302848_3 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 GO:0003674,GO:0003824,GO:0003899,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 2.7.7.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001295 503.0
BYDH1_k127_1302848_30 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 - - 0.0000000000000000000000000009162 115.0
BYDH1_k127_1302848_31 Ribosomal protein L30 K02907 - - 0.0000000000000000005584 87.0
BYDH1_k127_1302848_32 Belongs to the universal ribosomal protein uL29 family K02904 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000008718 79.0
BYDH1_k127_1302848_33 Belongs to the bacterial ribosomal protein bL36 family K02919 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000001469 70.0
BYDH1_k127_1302848_34 - - - - 0.0002309 48.0
BYDH1_k127_1302848_4 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 GO:0000027,GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046872,GO:0046914,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004848 440.0
BYDH1_k127_1302848_5 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008434 361.0
BYDH1_k127_1302848_6 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003254 298.0
BYDH1_k127_1302848_7 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000727 294.0
BYDH1_k127_1302848_8 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005388 289.0
BYDH1_k127_1302848_9 general secretion pathway protein D K02453 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005995 290.0
BYDH1_k127_1309983_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 0.0 1229.0
BYDH1_k127_1309983_1 Belongs to the aspartokinase family K00928 - 2.7.2.4 6.986e-210 657.0
BYDH1_k127_1309983_2 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005887 349.0
BYDH1_k127_1309983_3 Modulates RecA activity K03565 - - 0.0000000000000000000000000003017 120.0
BYDH1_k127_1309983_4 Could accelerate the degradation of some genes transcripts potentially through selective RNA binding K03563 - - 0.000000000000000000000003942 102.0
BYDH1_k127_1309983_5 COG0457 FOG TPR repeat - - - 0.0000000001491 69.0
BYDH1_k127_1309983_6 - - - - 0.000000009335 58.0
BYDH1_k127_1322440_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K13490 - - 1.51e-205 667.0
BYDH1_k127_1322440_1 diguanylate cyclase K07315,K11444 - 2.7.7.65,3.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001317 366.0
BYDH1_k127_1322440_2 SpoVR family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001043 337.0
BYDH1_k127_1322440_3 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K13491 - 3.1.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003895 320.0
BYDH1_k127_1322440_4 chemotaxis K03408,K13486,K13489 - - 0.00000000000000000000000000000000000000000000006778 177.0
BYDH1_k127_1322440_5 PFAM CheR methyltransferase, SAM binding domain K13486 - - 0.0000000000000000114 85.0
BYDH1_k127_1322440_6 Outer membrane protein beta-barrel domain - - - 0.0000191 54.0
BYDH1_k127_1384219_0 Belongs to the SUA5 family - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007227 291.0
BYDH1_k127_1384219_1 Sulfatase-modifying factor enzyme 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002106 280.0
BYDH1_k127_1384219_2 probably involved in intracellular septation K06190 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002025 243.0
BYDH1_k127_1384219_3 Peptidase family M50 - - - 0.00000000000000000000000000000000000000000000000000000000000000000004512 235.0
BYDH1_k127_1384219_4 PPIC-type PPIASE domain K03769 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000005853 197.0
BYDH1_k127_1384219_5 YCII-related domain - - - 0.0000000000000000000000000000000000000001469 156.0
BYDH1_k127_1384219_6 phosphohistidine phosphatase, SixA - - - 0.000000000000000000000000000000000003712 149.0
BYDH1_k127_1384219_7 Belongs to the BolA IbaG family K05527 - - 0.00000000000000000000000000999 115.0
BYDH1_k127_1384219_8 Winged helix-turn-helix DNA-binding - - - 0.000003172 49.0
BYDH1_k127_1415065_0 AAA domain - - - 3.742e-266 841.0
BYDH1_k127_1415065_1 TIGRFAM ATP-binding cassette protein, ChvD family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004749 360.0
BYDH1_k127_1415065_2 ABC transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000023 307.0
BYDH1_k127_1415065_3 Protein of unknown function (DUF2914) - - - 0.0000000000000000004063 94.0
BYDH1_k127_1432836_0 Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor K00697 - 2.4.1.15,2.4.1.347 6.452e-321 997.0
BYDH1_k127_1432836_1 Argininosuccinate lyase C-terminal K01755 GO:0003674,GO:0003824,GO:0004056,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016829,GO:0016840,GO:0016842,GO:0019752,GO:0042450,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.3.2.1 1.532e-230 728.0
BYDH1_k127_1432836_10 TfoX C-terminal domain K07343 - - 0.0000000000002841 74.0
BYDH1_k127_1432836_2 Sodium/hydrogen exchanger family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000535 481.0
BYDH1_k127_1432836_3 mechanosensitive ion channel K16052 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006676 346.0
BYDH1_k127_1432836_4 Histidine kinase K08082 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003002 344.0
BYDH1_k127_1432836_5 Psort location CytoplasmicMembrane, score - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001085 327.0
BYDH1_k127_1432836_6 Response regulator of the LytR AlgR family K02477,K08083 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002658 267.0
BYDH1_k127_1432836_7 - - - - 0.000000000000000000000000000000000000000000000000000000000000005407 224.0
BYDH1_k127_1432836_8 Removes the phosphate from trehalose 6-phosphate to produce free trehalose K01087 - 3.1.3.12 0.000000000000000000000000000000000000000000000000000000009776 207.0
BYDH1_k127_1432836_9 glucan 1,4-alpha-glucosidase activity K01178 - 3.2.1.3 0.000000000000000000000000000000000000000000000000007211 184.0
BYDH1_k127_1433995_0 STAS domain K03321 - - 6.338e-234 738.0
BYDH1_k127_1433995_1 PFAM Metal-dependent phosphohydrolase, HD K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001194 502.0
BYDH1_k127_1433995_2 PFAM sodium calcium exchanger membrane region K07301 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003274 496.0
BYDH1_k127_1433995_3 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002886 376.0
BYDH1_k127_1433995_4 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01531,K12955 - 3.6.3.2 0.0000000000000000000000000000000000000000000000000000000003447 209.0
BYDH1_k127_1433995_5 Domain of unknown function (DUF4336) - - - 0.00000000000000000000000000000000000000000000000000001871 200.0
BYDH1_k127_1433995_6 Chromate resistance exported protein - - - 0.00000000000000000003846 89.0
BYDH1_k127_1433995_7 - - - - 0.00001109 55.0
BYDH1_k127_1443008_0 Putative modulator of DNA gyrase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005374 445.0
BYDH1_k127_1443008_1 COG1718 Serine threonine protein kinase involved in cell cycle control K07178 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002531 418.0
BYDH1_k127_1443008_2 Transposase K07486 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005039 284.0
BYDH1_k127_1443008_3 SpoU rRNA Methylase family K02533,K15396 - 2.1.1.200 0.00000000000000000000000000000000000000000000000000000000000000000000000001343 258.0
BYDH1_k127_1443008_4 Putative modulator of DNA gyrase - - - 0.00000000000000000000000000000000000000000000000000005217 188.0
BYDH1_k127_1443008_5 Bacterial regulatory helix-turn-helix protein, lysR family K13634 - - 0.000000000000000000000000000000000000000000000000005492 184.0
BYDH1_k127_1443008_6 - - - - 0.00000000000000000000000000000000000001232 164.0
BYDH1_k127_1485140_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 - - 2.192e-229 726.0
BYDH1_k127_1485140_1 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 7.869e-223 696.0
BYDH1_k127_1485140_2 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004072 569.0
BYDH1_k127_1485140_3 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001823 438.0
BYDH1_k127_1485140_4 COG0835 Chemotaxis signal transduction protein K03415 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007529 378.0
BYDH1_k127_1485140_5 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002639 308.0
BYDH1_k127_1485140_6 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.000000000000000000000000000000000000000000000000000000000000003675 221.0
BYDH1_k127_1485140_7 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.0000000000000000000000000000000000002978 141.0
BYDH1_k127_1485140_8 Preprotein translocase, YajC subunit K03210 - - 0.0000000000000000000000000000000005805 134.0
BYDH1_k127_1542360_0 Belongs to the aconitase IPM isomerase family K01682 - 4.2.1.3,4.2.1.99 0.0 1298.0
BYDH1_k127_1542360_1 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 4.279e-218 685.0
BYDH1_k127_1542360_2 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004932 287.0
BYDH1_k127_1542360_3 Haem-degrading - - - 0.000000000000000000000000000000000000000000005062 169.0
BYDH1_k127_1542360_4 protein acetylation - - - 0.00000000000000000007408 98.0
BYDH1_k127_158315_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 0.0 1381.0
BYDH1_k127_158315_1 Belongs to the 5'-nucleotidase family K11751,K17224 - 3.1.3.5,3.6.1.45 2.793e-262 819.0
BYDH1_k127_158315_10 C-type monoheme cytochrome, which is part of the SoxAX cytochrome complex involved in sulfur oxidation. The SoxAX complex catalyzes the formation of a heterodisulfide bond between the conserved cysteine residue on a sulfur carrier SoxYZ complex subunit SoxY and thiosulfate or other inorganic sulfur substrates. This leads to the intermediary formation of conspicuous sulfur globules inside of the cells K17222 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007947 332.0
BYDH1_k127_158315_11 Permease YjgP YjgQ K11720 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005743 288.0
BYDH1_k127_158315_12 PFAM Phosphoglycerate mutase K02226 - 3.1.3.73 0.000000000000000000000000000000000000000000000000000000000000000000000000000000244 269.0
BYDH1_k127_158315_13 DsrE/DsrF/DrsH-like family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002139 247.0
BYDH1_k127_158315_14 Permease YjgP YjgQ family K07091 - - 0.00000000000000000000000000000000000000000000000000000000000000000000213 249.0
BYDH1_k127_158315_15 Zinc metalloprotease (Elastase) K01400,K08604 - 3.4.24.25,3.4.24.28 0.0000000000000000000000000000000000000000000000000000000000006437 242.0
BYDH1_k127_158315_16 Outer membrane protein transport protein (OMPP1/FadL/TodX) K06076 - - 0.00000000000000000000000000000000000000000000007397 173.0
BYDH1_k127_158315_17 Sulfur oxidation protein SoxY K17226 - - 0.00000000000000000000000000000000000000000000104 170.0
BYDH1_k127_158315_18 Cytochrome c K19713 - 1.8.2.2 0.0000000000000000000000000000000000001516 146.0
BYDH1_k127_158315_19 Sulphur oxidation protein SoxZ K17227 - - 0.0000000000000000000000000000000000336 136.0
BYDH1_k127_158315_2 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 2.132e-215 679.0
BYDH1_k127_158315_20 Belongs to the sulfur carrier protein TusA family K04085 - - 0.000000000000000000000000000000001459 131.0
BYDH1_k127_158315_21 DNA polymerase III, chi subunit K02339 - 2.7.7.7 0.00000000000000000000000000000002022 130.0
BYDH1_k127_158315_22 Cytochrome C oxidase, cbb3-type, subunit III K17223 - - 0.0000000000000000000000000003049 119.0
BYDH1_k127_158315_23 Subtilase family - - - 0.000000000000000009778 98.0
BYDH1_k127_158315_24 Domain of unknown function (DUF4340) - - - 0.00000000000000007561 93.0
BYDH1_k127_158315_25 CheB methylesterase K03412,K06597 - 3.1.1.61,3.5.1.44 0.0009347 51.0
BYDH1_k127_158315_3 Gliding motility protein GldG - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001585 558.0
BYDH1_k127_158315_4 Vacuole effluxer Atg22 like K06902 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001567 511.0
BYDH1_k127_158315_5 pyrroloquinoline quinone binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004732 547.0
BYDH1_k127_158315_6 Inorganic H+ pyrophosphatase K15987 - 3.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001238 436.0
BYDH1_k127_158315_7 Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001144 381.0
BYDH1_k127_158315_8 ATPases associated with a variety of cellular activities K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001378 369.0
BYDH1_k127_158315_9 COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001089 354.0
BYDH1_k127_1618626_0 accessory protein K06959 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0009314,GO:0009628,GO:0010212,GO:0044424,GO:0044444,GO:0044464,GO:0050896 - 0.0 1035.0
BYDH1_k127_1618626_1 Glutathione S-transferase K00799 - 2.5.1.18 0.0000000000000000000000000000000000000000000000001078 181.0
BYDH1_k127_1618626_2 endonuclease III - - - 0.000000000000000000000000000000003096 131.0
BYDH1_k127_1618626_3 - - - - 0.00000000000000000000000005499 117.0
BYDH1_k127_1642198_0 Protein of unknown function, DUF255 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006148 456.0
BYDH1_k127_1642198_1 Trypsin K04691 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008815 442.0
BYDH1_k127_1642198_10 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 GO:0002790,GO:0003674,GO:0005215,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008565,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0032940,GO:0033036,GO:0034613,GO:0042886,GO:0045184,GO:0046903,GO:0046907,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0070727,GO:0071702,GO:0071705 - 0.00000000000000000008195 91.0
BYDH1_k127_1642198_2 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000637 426.0
BYDH1_k127_1642198_3 TIGRFAM phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 - 5.3.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001058 396.0
BYDH1_k127_1642198_4 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006557 330.0
BYDH1_k127_1642198_5 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.00000000000000000000000000000000000000000000000000000000000000002576 226.0
BYDH1_k127_1642198_6 NGG1p interacting factor 3 - - - 0.00000000000000000000000000000000000000000000000000000000000005676 218.0
BYDH1_k127_1642198_7 Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP K01496 - 3.5.4.19 0.0000000000000000000000000000000000000000000000000000000025 203.0
BYDH1_k127_1642198_8 PFAM Phosphoribosyl-ATP pyrophosphohydrolase K01523 GO:0000105,GO:0003674,GO:0003824,GO:0004636,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 3.6.1.31 0.000000000000000000000000000000000000000000001328 166.0
BYDH1_k127_1642198_9 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation K03117 GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009977,GO:0015031,GO:0015291,GO:0015399,GO:0015405,GO:0015450,GO:0015833,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0022884,GO:0031224,GO:0031226,GO:0032991,GO:0033036,GO:0033281,GO:0034613,GO:0042802,GO:0042886,GO:0042887,GO:0043953,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0046907,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0065002,GO:0070727,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0098796,GO:0098797,GO:1904680 - 0.00000000000000000004591 95.0
BYDH1_k127_1656710_0 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source K01916 - 6.3.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003752 440.0
BYDH1_k127_1656710_1 COGs COG0318 Acyl-CoA synthetase (AMP-forming) AMP-acid ligase II K00666,K01897 - 6.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004287 381.0
BYDH1_k127_1656710_2 polysaccharide deacetylase - - - 0.000000000000000000000000000000000000000000000000000000000000001171 230.0
BYDH1_k127_1656710_3 transferase activity, transferring acyl groups K03824 - - 0.0000000000000000000000004721 118.0
BYDH1_k127_1656710_4 heat shock protein binding K05801 - - 0.000000000686 66.0
BYDH1_k127_1656710_5 Enoyl- acyl-carrier-protein reductase NADH K00208 GO:0003674,GO:0003824,GO:0004312,GO:0004318,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009987,GO:0016043,GO:0016053,GO:0016491,GO:0016627,GO:0016628,GO:0016740,GO:0016746,GO:0016747,GO:0017144,GO:0018130,GO:0019752,GO:0022607,GO:0030497,GO:0032787,GO:0034641,GO:0042364,GO:0042802,GO:0043436,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 1.3.1.10,1.3.1.9 0.00000001915 55.0
BYDH1_k127_1723282_0 Belongs to the GPI family K01810 GO:0003674,GO:0003824,GO:0004347,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0033554,GO:0034404,GO:0034599,GO:0034641,GO:0034654,GO:0034655,GO:0042221,GO:0042802,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0050896,GO:0051186,GO:0051188,GO:0051716,GO:0055086,GO:0070887,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576 5.3.1.9 2.765e-279 867.0
BYDH1_k127_1723282_1 Belongs to the cysteine synthase cystathionine beta- synthase family K01738 - 2.5.1.47 5.482e-219 698.0
BYDH1_k127_1723282_10 FG-GAP repeat protein - - - 0.0000000000000000000000134 116.0
BYDH1_k127_1723282_11 Domain of unknown function DUF11 - - - 0.00000000000000000000004352 114.0
BYDH1_k127_1723282_12 Protein of unknown function (DUF2892) - - - 0.0000000000000000000608 91.0
BYDH1_k127_1723282_13 - - - - 0.000000000000000003467 88.0
BYDH1_k127_1723282_2 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000134 321.0
BYDH1_k127_1723282_3 Methionine biosynthesis protein MetW - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000028 312.0
BYDH1_k127_1723282_4 Belongs to the D-alanine--D-alanine ligase family K01921,K01955 - 6.3.2.4,6.3.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001932 306.0
BYDH1_k127_1723282_5 thiamine-containing compound biosynthetic process K02051 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003321 282.0
BYDH1_k127_1723282_6 PFAM molybdopterin binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004833 277.0
BYDH1_k127_1723282_7 Flavodoxin-like fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005519 257.0
BYDH1_k127_1723282_8 DsrE/DsrF-like family - - - 0.00000000000000000000000000000000000000000000000000005653 192.0
BYDH1_k127_1723282_9 - - - - 0.000000000000000000000000000000000001375 141.0
BYDH1_k127_176537_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00372 - - 0.0 1163.0
BYDH1_k127_176537_1 Pyridine nucleotide-disulphide oxidoreductase K00362,K05297 - 1.18.1.1,1.7.1.15 0.0 1033.0
BYDH1_k127_176537_2 TIGRFAM nitrite reductase NAD(P)H , small subunit K00363 - 1.7.1.15 0.0000000000000000000000000000000000000000002475 160.0
BYDH1_k127_176537_3 COG1055 Na H antiporter NhaD and related arsenite permeases - - - 0.0000000000000000000000000000000000000001958 150.0
BYDH1_k127_176537_4 Putative prokaryotic signal transducing protein - - - 0.000000000000005412 77.0
BYDH1_k127_1809089_0 PFAM YaeQ - - - 0.000000000000000000000000000000000000000000000000000000000000000001794 236.0
BYDH1_k127_1809089_1 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000144 193.0
BYDH1_k127_1809089_3 Domain of unknown function (DUF5062) - - - 0.000000000000000000000000002632 115.0
BYDH1_k127_1809089_4 Domain of unknown function (DUF4389) - - - 0.0000000000000000000000003319 109.0
BYDH1_k127_1809089_5 RNA-binding K14761 - - 0.000000000000000000003498 94.0
BYDH1_k127_1809089_6 Cysteine-rich CPXCG - - - 0.0000000000000003263 85.0
BYDH1_k127_1809089_7 peptidase - - - 0.000003361 53.0
BYDH1_k127_1810969_0 TIGRFAM glutamine synthetase, type I K01915 - 6.3.1.2 1.992e-263 817.0
BYDH1_k127_1810969_1 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002203 375.0
BYDH1_k127_1810969_2 PFAM tRNA - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005828 297.0
BYDH1_k127_1810969_3 Belongs to the sulfur carrier protein TusA family - - - 0.00000000000000000000000006123 108.0
BYDH1_k127_1810969_4 Domain of unknown function (DUF4124) - - - 0.0000000000000000001077 96.0
BYDH1_k127_1810969_5 signal transduction histidine kinase K07708 - 2.7.13.3 0.000000007581 59.0
BYDH1_k127_1820289_0 PFAM AMP-dependent synthetase K01897 - 6.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000005852 253.0
BYDH1_k127_1820289_1 Tellurite resistance protein TehB - - - 0.000000000000000000000000000000000000000000000000000000000001109 228.0
BYDH1_k127_1820289_2 Provides the (R)-glutamate required for cell wall biosynthesis K01776 - 5.1.1.3 0.00000000000000000000000000000000000000000000000000000004264 200.0
BYDH1_k127_1820289_3 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814 - 2.4.1.129 0.0000000000000000000000000000000000000000000001718 176.0
BYDH1_k127_1820289_4 Polymer-forming cytoskeletal - - - 0.000000212 57.0
BYDH1_k127_1837749_0 PFAM Formylglycine-generating sulfatase enzyme K18912 - 1.14.99.50 0.0000000000000000000000000000000000000000000000000000000000000000000000000004582 271.0
BYDH1_k127_1837749_1 Sulfatase-modifying factor enzyme 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000007715 241.0
BYDH1_k127_1837749_2 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems, periplasmic components K02051 - - 0.00000000000000000000000000000000000000000000000000000000000000000008424 243.0
BYDH1_k127_1837749_3 ABC transporter K02049 - - 0.0000000000000000000000000000000000000000000000000000000000000000002668 242.0
BYDH1_k127_1837749_4 Sulfatase-modifying factor enzyme 1 K20333 - - 0.00000000000000000000000000000000000000000000000000000000000000001499 235.0
BYDH1_k127_1837749_5 PFAM binding-protein-dependent transport systems inner membrane component K02050 - - 0.00000000000000000000000000000000000000000000000000000000000000004058 231.0
BYDH1_k127_1837749_6 iron ion homeostasis K02012 GO:0005575,GO:0005623,GO:0042597,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000005052 234.0
BYDH1_k127_1837749_7 PFAM Formylglycine-generating sulfatase enzyme K06196,K12267 - 1.8.4.11,1.8.4.12 0.000000000000000000000000000000000000000000000000006979 190.0
BYDH1_k127_1837749_8 EamA-like transporter family - - - 0.00000000000000000000000000000000000000004155 163.0
BYDH1_k127_1837749_9 Methyltransferase domain - - - 0.000000000000000002103 96.0
BYDH1_k127_1861369_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 4.708e-224 707.0
BYDH1_k127_1861369_1 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000525 467.0
BYDH1_k127_1861369_2 signal transduction protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000494 243.0
BYDH1_k127_1861369_3 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995,K08744 - 2.7.8.41,2.7.8.5 0.00000000000000000000000000000000000000000000000000000000000000009874 226.0
BYDH1_k127_1861369_4 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03564 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000004288 198.0
BYDH1_k127_1861369_5 Type II secretion system protein B K02451 - - 0.000000000000000000004688 102.0
BYDH1_k127_1861369_6 Type II secretory pathway component ExeA K02450 - - 0.00000000006166 65.0
BYDH1_k127_1880919_0 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002059 468.0
BYDH1_k127_1880919_1 Belongs to the FPP GGPP synthase family K02523 - 2.5.1.90 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005009 424.0
BYDH1_k127_1880919_2 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate K00931 GO:0000287,GO:0003674,GO:0003824,GO:0004349,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006560,GO:0006561,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016597,GO:0016740,GO:0016772,GO:0016774,GO:0017144,GO:0018130,GO:0019202,GO:0019752,GO:0031406,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046872,GO:0055129,GO:0071704,GO:0097159,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1901973 2.7.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000325 302.0
BYDH1_k127_1880919_3 This protein binds to 23S rRNA in the presence of protein L20 K02888 GO:0003674,GO:0003735,GO:0005198 - 0.000000000000000000000000000000000000005326 149.0
BYDH1_k127_1880919_4 Belongs to the bacterial ribosomal protein bL27 family K02899 GO:0000027,GO:0001558,GO:0003674,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040008,GO:0042254,GO:0042255,GO:0042256,GO:0042273,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0044877,GO:0048518,GO:0050789,GO:0050794,GO:0051128,GO:0065003,GO:0065007,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090069,GO:0090070,GO:1901564,GO:1901566,GO:1901576,GO:1902626,GO:1990904 - 0.00000000000000000000000000000000004616 135.0
BYDH1_k127_1880919_5 - - - - 0.00003024 47.0
BYDH1_k127_1880919_6 - K06950 - - 0.00009613 48.0
BYDH1_k127_1918900_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 GO:0003674,GO:0003824,GO:0003916,GO:0003917,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006265,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009987,GO:0016043,GO:0016853,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051276,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:1901360 5.99.1.2 0.0 1133.0
BYDH1_k127_1918900_1 acyl-CoA dehydrogenase K06445 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002484 496.0
BYDH1_k127_1918900_2 PFAM Phosphoribulokinase uridine kinase K00855 - 2.7.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003244 441.0
BYDH1_k127_1918900_3 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003091 344.0
BYDH1_k127_1918900_4 TIGRFAM DNA protecting protein DprA K04096 - - 0.0000000000000000000000000000000000000000000000000000000000000000003638 234.0
BYDH1_k127_1918900_5 transcriptional regulator, Rrf2 family K13771 - - 0.000000000000000000000000000000000000000002819 159.0
BYDH1_k127_1918900_6 Belongs to the Smg family K03747 - - 0.00000000000000000000000000000000000001032 150.0
BYDH1_k127_1952418_0 Protein of unknown function (DUF692) K09930 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002764 404.0
BYDH1_k127_1952418_1 cytochrome c peroxidase K00428 - 1.11.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000004897 250.0
BYDH1_k127_1952418_10 Atypical PilZ domain, cyclic di-GMP receptor - - - 0.000000000000000004328 91.0
BYDH1_k127_1952418_2 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000001453 244.0
BYDH1_k127_1952418_3 A domain in the BMP inhibitor chordin and in microbial proteins. - - - 0.0000000000000000000000000000000000000000000000000000000000000004797 237.0
BYDH1_k127_1952418_4 Putative DNA-binding domain - - - 0.00000000000000000000000000000000000000000000000004354 189.0
BYDH1_k127_1952418_5 PhoQ Sensor - - - 0.00000000000000000000000000000000000000000008138 173.0
BYDH1_k127_1952418_6 PFAM DsrE DsrF-like family - - - 0.00000000000000000000000000000007302 127.0
BYDH1_k127_1952418_7 - - - - 0.000000000000000000000000001502 114.0
BYDH1_k127_1952418_8 helix_turn_helix, cAMP Regulatory protein - - - 0.000000000000000000000000001609 121.0
BYDH1_k127_1952418_9 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 GO:0003674,GO:0003678,GO:0003824,GO:0004003,GO:0004386,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006268,GO:0006270,GO:0006276,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009628,GO:0009987,GO:0010212,GO:0010332,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032392,GO:0032508,GO:0033554,GO:0034641,GO:0034645,GO:0042221,GO:0042623,GO:0043138,GO:0043140,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0046483,GO:0046677,GO:0050896,GO:0051276,GO:0051716,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:1901360,GO:1901576 - 0.0000000000000000000000003371 108.0
BYDH1_k127_2019299_0 Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02400 - - 2.751e-290 905.0
BYDH1_k127_2019299_1 FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation K02416 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001972 464.0
BYDH1_k127_2019299_10 Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P) K03414 - - 0.0000000000000000000000000000000000000000000000000000000000000002434 228.0
BYDH1_k127_2019299_11 Signal transducing histidine kinase, homodimeric K03407 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000001254 197.0
BYDH1_k127_2019299_12 FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation K02417 - - 0.000000000000000000000000000000000000000000003008 167.0
BYDH1_k127_2019299_13 Flagellar basal body-associated protein FliL - - - 0.00000000000000000000000002779 118.0
BYDH1_k127_2019299_14 Bacterial export proteins, family 3 K02420 - - 0.00000000000000000000000007172 112.0
BYDH1_k127_2019299_15 PFAM flagellar biosynthesis protein, FliO K02418 - - 0.000000000000000003138 95.0
BYDH1_k127_2019299_2 Belongs to the ParA family K04562 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004 406.0
BYDH1_k127_2019299_3 Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02401 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001461 366.0
BYDH1_k127_2019299_4 SRP54-type protein, GTPase domain K02404 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005132 344.0
BYDH1_k127_2019299_5 cytochrome c peroxidase K00428 - 1.11.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001757 328.0
BYDH1_k127_2019299_6 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes K02405 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002847 320.0
BYDH1_k127_2019299_7 Plays a role in the flagellum-specific transport system K02419 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008466 292.0
BYDH1_k127_2019299_8 Role in flagellar biosynthesis K02421 - - 0.0000000000000000000000000000000000000000000000000000000000000000002777 237.0
BYDH1_k127_2019299_9 cheY-homologous receiver domain K03413 - - 0.000000000000000000000000000000000000000000000000000000000000000001361 229.0
BYDH1_k127_205530_0 Allophanate hydrolase subunit 1 K01941 - 6.3.4.6 0.0 1150.0
BYDH1_k127_205530_1 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle K01595 GO:0003674,GO:0003824,GO:0004611,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0008964,GO:0009060,GO:0009987,GO:0015980,GO:0016829,GO:0016830,GO:0016831,GO:0016999,GO:0017144,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045333,GO:0055114,GO:0071704,GO:0072350 4.1.1.31 2.388e-212 679.0
BYDH1_k127_205530_10 Acetyltransferase (GNAT) domain - - - 0.0007961 44.0
BYDH1_k127_205530_2 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components K02051 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002327 468.0
BYDH1_k127_205530_3 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle K01595 - 4.1.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001609 383.0
BYDH1_k127_205530_4 Binding-protein-dependent transport system inner membrane component K02050 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001081 353.0
BYDH1_k127_205530_5 TIGRFAM Urea carboxylase-associated protein 2 K09967 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005787 347.0
BYDH1_k127_205530_6 TIGRFAM Urea carboxylase-associated protein 1 K09967 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002943 336.0
BYDH1_k127_205530_7 ABC transporter K02049 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001625 336.0
BYDH1_k127_205530_8 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000176 266.0
BYDH1_k127_205530_9 Metallo-beta-lactamase superfamily K13075 - 3.1.1.81 0.0000000000000000000000000000000000000000000000000000000000000000000000000004881 258.0
BYDH1_k127_205837_0 COG3157 Hemolysin-coregulated protein K11903 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000993 303.0
BYDH1_k127_205837_1 PFAM Protein phosphatase 2C K01090,K20074 - 3.1.3.16 0.0000000000000000000000000000000000000000000000000000000000000001413 236.0
BYDH1_k127_205837_2 YoeB-like toxin of bacterial type II toxin-antitoxin system K19158 - - 0.00000000000000000000000000000002641 127.0
BYDH1_k127_205837_3 histone H2A K63-linked ubiquitination - - - 0.0000000000000000000000000000401 121.0
BYDH1_k127_205837_4 Domain of unknown function (DUF4150) - - - 0.0000000000000000000002985 110.0
BYDH1_k127_205837_5 Antitoxin component of a toxin-antitoxin (TA) module - - - 0.000000000000000000001468 96.0
BYDH1_k127_2065929_0 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 1.085e-302 945.0
BYDH1_k127_2065929_1 it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins K02314 - 3.6.4.12 2.459e-216 680.0
BYDH1_k127_2065929_10 Binds to the 23S rRNA K02939 - - 0.0000000000000000000000000000000000000000000000000000004072 196.0
BYDH1_k127_2065929_11 membrane - - - 0.0000000000000000000000000000000000000000000000002136 188.0
BYDH1_k127_2065929_12 Binds together with S18 to 16S ribosomal RNA K02990 - - 0.0000000000000000000000000000000000000000000004843 173.0
BYDH1_k127_2065929_13 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0019843,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0048027,GO:0070181,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000006005 126.0
BYDH1_k127_2065929_14 Binds the second messenger bis-(3'-5') cyclic dimeric guanosine monophosphate (c-di-GMP). Can bind two c-di-GMP molecules per monomer. May play a role in bacterial second- messenger regulated processes. Binding to c-di-GMP induces a conformational change of the C- and N-termini resulting in the exposure of a highly negative surface on one side of the protein to a - - - 0.00000000000000000000000000005319 126.0
BYDH1_k127_2065929_15 protein conserved in bacteria K09937 - - 0.000000000000135 72.0
BYDH1_k127_2065929_2 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 GO:0003674,GO:0003824,GO:0004019,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0015949,GO:0016874,GO:0016879,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033554,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046033,GO:0046040,GO:0046085,GO:0046086,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0050896,GO:0051716,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.4.4 1.076e-212 667.0
BYDH1_k127_2065929_3 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 9.186e-200 631.0
BYDH1_k127_2065929_4 Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine K02502 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001456 452.0
BYDH1_k127_2065929_5 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004815 383.0
BYDH1_k127_2065929_6 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001505 397.0
BYDH1_k127_2065929_7 HflC and HflK could regulate a protease K04087 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000353 323.0
BYDH1_k127_2065929_8 (ABC) transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004679 300.0
BYDH1_k127_2065929_9 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. RlmB subfamily K03218 GO:0000154,GO:0000451,GO:0000453,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070039,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.185 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004829 302.0
BYDH1_k127_2069476_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 GO:0003674,GO:0003824,GO:0004812,GO:0004822,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006428,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.5 0.0 1420.0
BYDH1_k127_2069476_1 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K03527 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016491,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0032787,GO:0042380,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046490,GO:0048037,GO:0051536,GO:0051538,GO:0051540,GO:0055114,GO:0071704,GO:0090407,GO:1901135,GO:1901576 1.17.7.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005339 473.0
BYDH1_k127_2069476_2 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.0000000000000000000000000000000000000000000000000000000008397 205.0
BYDH1_k127_2069476_3 FKBP-type peptidyl-prolyl cis-trans isomerase K03774 - 5.2.1.8 0.000000000000000000000000000000000000071 147.0
BYDH1_k127_2069476_4 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.00000000000000000000001129 102.0
BYDH1_k127_2069476_5 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.00000000000000001883 82.0
BYDH1_k127_2069476_6 COG4968 Tfp pilus assembly protein PilE K02655 - - 0.0000000000000004603 83.0
BYDH1_k127_2090256_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 GO:0000988,GO:0000990,GO:0003674,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006352,GO:0006355,GO:0006725,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016070,GO:0016987,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0031323,GO:0031326,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0043254,GO:0044087,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097659,GO:0140110,GO:1901360,GO:1901362,GO:1901576,GO:1903506,GO:2000112,GO:2000142,GO:2001141 - 1.029e-253 796.0
BYDH1_k127_2090256_1 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004024 587.0
BYDH1_k127_2090256_2 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 GO:0000287,GO:0000408,GO:0002949,GO:0003674,GO:0003824,GO:0004175,GO:0004222,GO:0005488,GO:0005506,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006508,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0019538,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0042802,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0070011,GO:0070525,GO:0071704,GO:0090304,GO:0140030,GO:0140032,GO:0140096,GO:1901360,GO:1901564 2.3.1.234 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002241 490.0
BYDH1_k127_2090256_3 Inositol monophosphatase family K01082 - 3.1.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001264 303.0
BYDH1_k127_2090256_4 PFAM NUDIX hydrolase K08312 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002107 243.0
BYDH1_k127_2090256_5 Belongs to the UPF0061 (SELO) family - - - 0.00000000000000000000000000000000000000000000000000000000003011 208.0
BYDH1_k127_2090256_6 Yqey-like protein K09117 - - 0.00000000000000000000000000000000000000000000000463 177.0
BYDH1_k127_2090256_7 Belongs to the bacterial histone-like protein family - - - 0.000000000000000000000000000002963 123.0
BYDH1_k127_2090256_8 Belongs to the bacterial ribosomal protein bS21 family K02970 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000003116 110.0
BYDH1_k127_2114253_0 reductase, dissimilatory-type beta subunit K11181 - 1.8.99.5 3.555e-201 630.0
BYDH1_k127_2114253_1 Nitrate reductase gamma subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000015 335.0
BYDH1_k127_2114253_2 DsrE/DsrF-like family K07235 - - 0.00000000000000000000000000000000000000000000000000000000000004886 214.0
BYDH1_k127_2114253_3 Belongs to the DsrF TusC family K07236 - - 0.00000000000000000000000000000000000000000000000000000002149 199.0
BYDH1_k127_2114253_4 part of a sulfur-relay system K11179 - - 0.000000000000000000000000000000000000000000000000000004161 192.0
BYDH1_k127_2114253_5 DsrH like protein K07237 - - 0.0000000000000000000000000000001629 128.0
BYDH1_k127_2114253_6 TIGRFAM sulfite reductase, dissimilatory-type alpha subunit K11180 - 1.8.99.5 0.0000001598 52.0
BYDH1_k127_2141472_0 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 2.382e-231 720.0
BYDH1_k127_2141472_1 Diguanylate cyclase K02488 - 2.7.7.65 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006945 308.0
BYDH1_k127_2141472_10 Cytochrome c7 and related cytochrome c - - - 0.000000000000000000000000000000000000000008812 161.0
BYDH1_k127_2141472_11 PFAM Outer membrane lipoprotein Slp K07285 - - 0.00000000000000000000000000000000000000001072 160.0
BYDH1_k127_2141472_12 Cytochrome c7 and related cytochrome c - - - 0.0000000000000000000000000000000002989 144.0
BYDH1_k127_2141472_13 protein ubiquitination K21441 - - 0.00000000000000000000000007295 114.0
BYDH1_k127_2141472_14 Ankyrin repeats (many copies) - - - 0.0000000000000000000007711 105.0
BYDH1_k127_2141472_15 Methyltransferase type 11 - - - 0.0000000000000000308 84.0
BYDH1_k127_2141472_2 SMART cyclic nucleotide-binding K10914 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004832 256.0
BYDH1_k127_2141472_3 HDOD domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001864 258.0
BYDH1_k127_2141472_4 PFAM LVIVD repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000003588 257.0
BYDH1_k127_2141472_5 Catalyzes the dehydration of methylthioribulose-1- phosphate (MTRu-1-P) into 2,3-diketo-5-methylthiopentyl-1- phosphate (DK-MTP-1-P) K08964 - 4.2.1.109 0.00000000000000000000000000000000000000000000000000000000007775 211.0
BYDH1_k127_2141472_6 Belongs to the thioredoxin family K03671 - - 0.00000000000000000000000000000000000000000000000000000003143 197.0
BYDH1_k127_2141472_7 Belongs to the 5-formyltetrahydrofolate cyclo-ligase family K01934 GO:0003674,GO:0003824,GO:0006082,GO:0006575,GO:0006725,GO:0006730,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009396,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0016882,GO:0018130,GO:0019438,GO:0019752,GO:0022611,GO:0030272,GO:0032502,GO:0034641,GO:0035999,GO:0042398,GO:0042558,GO:0042559,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0046653,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.3.2 0.00000000000000000000000000000000000000000002095 169.0
BYDH1_k127_2141472_8 belongs to the Fur family K09826 - - 0.00000000000000000000000000000000000000000004706 163.0
BYDH1_k127_2141472_9 PFAM Outer membrane lipoprotein Slp K07285 - - 0.000000000000000000000000000000000000000001834 163.0
BYDH1_k127_2187691_0 von Willebrand factor, type A K07114 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004535 580.0
BYDH1_k127_2187691_1 CBS-domain-containing membrane protein K07168 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001502 302.0
BYDH1_k127_2187691_2 PHP domain K07053 - 3.1.3.97 0.00000000000000000000000000000000000000000000000000000000000000000000000000000662 269.0
BYDH1_k127_2187691_3 Belongs to the UPF0234 family K09767 - - 0.000000000000000000000000000000000000000000000000000000000003139 215.0
BYDH1_k127_2187691_4 Sortase family - - - 0.000000000000000000000000000000000000000000000002041 182.0
BYDH1_k127_2187691_5 COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases - - - 0.00000000000000000000000000000000000000000000003164 173.0
BYDH1_k127_2187691_6 COG3170 Tfp pilus assembly protein FimV K08086 - - 0.000000000000001207 79.0
BYDH1_k127_2188284_0 Belongs to the GARS family K01945 - 6.3.4.13 4.118e-216 676.0
BYDH1_k127_2188284_1 Bacterial protein of unknown function (DUF853) K06915 - - 2.116e-196 623.0
BYDH1_k127_2188284_2 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000169 484.0
BYDH1_k127_2188284_3 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.000000000000000000000000000000000000000000000000000000000000000000006817 240.0
BYDH1_k127_2188284_4 Doubled CXXCH motif (Paired_CXXCH_1) - - - 0.00000000000000000000000000000000000000000000000000000006167 208.0
BYDH1_k127_2188284_5 SurA N-terminal domain - - - 0.000000000000000000000000000000000000000000000000000005332 204.0
BYDH1_k127_2189764_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004049 389.0
BYDH1_k127_2189764_1 diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001521 362.0
BYDH1_k127_2189764_2 ABC transporter, phosphonate, periplasmic substrate-binding protein K02044 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000684 313.0
BYDH1_k127_2189764_3 AAA domain K07028 - - 0.00000000000000000000000000000000000000000000000001219 188.0
BYDH1_k127_2254557_0 Doubled CXXCH motif (Paired_CXXCH_1) - - - 7.604e-274 869.0
BYDH1_k127_2254557_1 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001321 454.0
BYDH1_k127_2254557_10 Lactonase, 7-bladed beta-propeller - - - 0.000000000000000000000000000105 134.0
BYDH1_k127_2254557_11 - - - - 0.00000000000000000000000004396 124.0
BYDH1_k127_2254557_12 PFAM NHL repeat containing protein - - - 0.0000000000000000000407 102.0
BYDH1_k127_2254557_13 Lactonase, 7-bladed beta-propeller - - - 0.0000000000000111 88.0
BYDH1_k127_2254557_14 - - - - 0.000000009319 68.0
BYDH1_k127_2254557_2 6-bladed beta-propeller - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008282 385.0
BYDH1_k127_2254557_3 Belongs to the anaerobic coproporphyrinogen-III oxidase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002833 384.0
BYDH1_k127_2254557_4 PFAM CBS domain K06189 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004491 349.0
BYDH1_k127_2254557_5 Cytochrome c554 and c-prime - - - 0.000000000000000000000000000000000000000000000000000000000000000000305 236.0
BYDH1_k127_2254557_6 Cytochrome c7 and related cytochrome c - - - 0.000000000000000000000000000000000000000000000000000000001522 206.0
BYDH1_k127_2254557_7 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 GO:0000469,GO:0000478,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004540,GO:0005488,GO:0006139,GO:0006355,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016070,GO:0016072,GO:0016151,GO:0016787,GO:0016788,GO:0016892,GO:0016894,GO:0019219,GO:0019222,GO:0019538,GO:0022613,GO:0030490,GO:0031323,GO:0031326,GO:0031554,GO:0031564,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042274,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043244,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0046483,GO:0046872,GO:0046914,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1903506,GO:2000112,GO:2001141 - 0.000000000000000000000000000000000000000000000101 176.0
BYDH1_k127_2254557_8 Cytochrome c7 and related cytochrome c - - - 0.0000000000000000000000000000000000000000001511 165.0
BYDH1_k127_2254557_9 PhoH-like protein K06217 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000000000000007313 128.0
BYDH1_k127_2281217_0 Binding-protein-dependent transport system inner membrane component K02011 - - 2.264e-204 648.0
BYDH1_k127_2281217_1 DEAD-box RNA helicase involved in ribosome assembly. Has RNA-dependent ATPase activity and unwinds double-stranded RNA K11927 GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006807,GO:0006950,GO:0006996,GO:0008026,GO:0008150,GO:0008152,GO:0008186,GO:0009266,GO:0009408,GO:0009628,GO:0009987,GO:0010501,GO:0016043,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0034641,GO:0042254,GO:0042255,GO:0042623,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0065003,GO:0070035,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0140098,GO:1901360 3.6.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004838 556.0
BYDH1_k127_2281217_2 Belongs to the ABC transporter superfamily K02010 - 3.6.3.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001879 471.0
BYDH1_k127_2281217_3 diguanylate cyclase - - - 0.0000000000000000000000000000000000000000004514 174.0
BYDH1_k127_2303246_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 6.261e-269 838.0
BYDH1_k127_2303246_1 Belongs to the KdsA family K01627 - 2.5.1.55 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005475 471.0
BYDH1_k127_2303246_2 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001297 404.0
BYDH1_k127_2303246_3 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.0000000000000000000000000000000000000000000000000000000000008016 218.0
BYDH1_k127_2309318_0 Asparagine synthase K01953 - 6.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002115 615.0
BYDH1_k127_2309318_1 Glycosyl transferase 4-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001505 529.0
BYDH1_k127_2309318_2 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003741 449.0
BYDH1_k127_2309318_3 O-antigen ligase like membrane protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003566 420.0
BYDH1_k127_2309318_4 PFAM Polysaccharide deacetylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001189 334.0
BYDH1_k127_2309318_5 ubiE/COQ5 methyltransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002024 290.0
BYDH1_k127_2309318_6 Serine aminopeptidase, S33 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000007231 252.0
BYDH1_k127_2309318_7 COG1670 acetyltransferases, including N-acetylases of ribosomal proteins - - - 0.00000000000000000000000000000000000000000000000000000000000005224 221.0
BYDH1_k127_2309318_8 TPR repeat - - - 0.0000000000000000000000000000000000000000000000000001055 195.0
BYDH1_k127_2309318_9 Phosphopantetheine attachment site - - - 0.00000000000000000000001723 103.0
BYDH1_k127_2322123_0 Ammonium transporter K03320 - - 1.057e-210 660.0
BYDH1_k127_2322123_1 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004809 391.0
BYDH1_k127_2322123_2 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001053 364.0
BYDH1_k127_2322123_3 Iron-binding zinc finger CDGSH type - - - 0.00000000000000000000000000000000008913 134.0
BYDH1_k127_2322123_4 Domain of unknown function (DUF4124) - - - 0.00000003838 61.0
BYDH1_k127_2548075_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 7.421e-216 687.0
BYDH1_k127_2548075_1 glyoxalase III activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000337 266.0
BYDH1_k127_2548075_2 RibD C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000002122 199.0
BYDH1_k127_2548075_3 Antibiotic biosynthesis monooxygenase - - - 0.0000000000000000000000000000000000000000000002867 168.0
BYDH1_k127_2548075_4 Sugar (and other) transporter - - - 0.00000000000000000000000000000000000000009053 153.0
BYDH1_k127_2548075_5 - - - - 0.00000000000000000000000000000003217 132.0
BYDH1_k127_2573609_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 6.664e-290 896.0
BYDH1_k127_2573609_1 Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps K04084 - 1.8.1.8 3.834e-195 629.0
BYDH1_k127_2573609_2 lipid A export permease ATP-binding protein MsbA K11085 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001448 286.0
BYDH1_k127_2573609_3 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 - - 0.0000000000000000000000000000000000000000002554 159.0
BYDH1_k127_2573609_4 CutA1 divalent ion tolerance protein K03926 - - 0.00000000000000000000000000002181 121.0
BYDH1_k127_2578149_0 Patatin-like phospholipase - - - 2.347e-219 700.0
BYDH1_k127_2578149_1 Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen-IX K00228 GO:0003674,GO:0005488,GO:0005515,GO:0042802,GO:0042803,GO:0046983 1.3.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003985 534.0
BYDH1_k127_2578149_10 TIGRFAM Diguanylate cyclase K13590 - 2.7.7.65 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002568 291.0
BYDH1_k127_2578149_11 Cytochrome C and Quinol oxidase polypeptide I - - - 0.000000000000000000000000000000000000000000000000000000000000000003259 229.0
BYDH1_k127_2578149_12 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Catalyzes the conversion of L-threonine, HCO(3)(-) CO(2) and ATP to give threonylcarbamoyl-AMP (TC-AMP) as the acyladenylate intermediate, with the release of diphosphate K07566 - 2.7.7.87 0.000000000000000000000000000000000000000000000000000000000000007847 220.0
BYDH1_k127_2578149_13 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 GO:0003674,GO:0003824,GO:0004595,GO:0005488,GO:0005515,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.7.3 0.00000000000000000000000000000000000000000000000000000000000006276 217.0
BYDH1_k127_2578149_14 ABC transporter, phosphonate, periplasmic substrate-binding protein K02044 - - 0.0000000000000000000000000000000000000000000000000000000002059 214.0
BYDH1_k127_2578149_15 Specifically methylates the guanine in position 966 of 16S rRNA in the assembled 30S particle K08316 - 2.1.1.171 0.00000000000000000000000000000000000000000000000000000006003 201.0
BYDH1_k127_2578149_17 4Fe-4S binding domain - - - 0.0000000000000000000000000000000000000001123 155.0
BYDH1_k127_2578149_18 - - - - 0.0000000000000000000000000000000000000005048 153.0
BYDH1_k127_2578149_19 COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases - - - 0.00000000000000000000000000000001643 129.0
BYDH1_k127_2578149_2 Branched-chain amino acid transport system / permease component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008057 513.0
BYDH1_k127_2578149_20 ABC transporter, periplasmic molybdate-binding protein K02020 - - 0.0000000000000000000000000002589 117.0
BYDH1_k127_2578149_3 GGDEF domain containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003987 530.0
BYDH1_k127_2578149_4 Receptor family ligand binding region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001103 484.0
BYDH1_k127_2578149_5 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009626 461.0
BYDH1_k127_2578149_6 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000892 325.0
BYDH1_k127_2578149_7 ABC-type branched-chain amino acid transport systems ATPase component K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001707 324.0
BYDH1_k127_2578149_8 molybdate abc transporter K02018,K15496 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002525 287.0
BYDH1_k127_2578149_9 Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system K02017 GO:0003674,GO:0003824,GO:0005215,GO:0006810,GO:0006811,GO:0006820,GO:0008150,GO:0008509,GO:0015075,GO:0015098,GO:0015103,GO:0015318,GO:0015399,GO:0015405,GO:0015412,GO:0015689,GO:0015698,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0034220,GO:0042623,GO:0042626,GO:0043225,GO:0043492,GO:0051179,GO:0051234,GO:0055085,GO:0098656,GO:0099133 3.6.3.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007738 296.0
BYDH1_k127_2607994_0 MotA/TolQ/ExbB proton channel family K02556 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001453 341.0
BYDH1_k127_2607994_1 PFAM Cobyrinic acid a,c-diamide synthase K03496 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008897 295.0
BYDH1_k127_2607994_2 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000005628 245.0
BYDH1_k127_2607994_3 PFAM OmpA MotB domain protein K02557 - - 0.0000000000000000000000000000000000000000000000000000000000000000000006275 247.0
BYDH1_k127_2607994_4 Two component signalling adaptor domain K03408 - - 0.000000000000000000000000000000000000000000000000000000000001171 214.0
BYDH1_k127_2607994_5 FlhB HrpN YscU SpaS Family K04061 - - 0.000000000000000000000001139 113.0
BYDH1_k127_2607994_6 Two component signalling adaptor domain K03408 - - 0.00000000002443 75.0
BYDH1_k127_2607994_7 Flagellar hook-length control protein FliK - - - 0.00000000002485 73.0
BYDH1_k127_2607994_8 Protein of unknown function (DUF2802) - - - 0.00003146 52.0
BYDH1_k127_2626988_0 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009360,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030234,GO:0030337,GO:0032991,GO:0034641,GO:0034645,GO:0042575,GO:0042802,GO:0043170,GO:0043846,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050790,GO:0061695,GO:0065007,GO:0065009,GO:0071704,GO:0090304,GO:0098772,GO:1901360,GO:1901576,GO:1902494,GO:1990234 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001677 550.0
BYDH1_k127_2626988_1 MotA/TolQ/ExbB proton channel family K02556 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004231 336.0
BYDH1_k127_2626988_10 response regulator - - - 0.000000000009902 69.0
BYDH1_k127_2626988_2 Flagellar motor protein K02557 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004041 293.0
BYDH1_k127_2626988_3 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes K02405 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001028 276.0
BYDH1_k127_2626988_4 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001311 276.0
BYDH1_k127_2626988_5 P-aminobenzoate N-oxygenase AurF - - - 0.0000000000000000000000000000000000000000000000000000000000000000006727 239.0
BYDH1_k127_2626988_6 signal transduction histidine kinase - - - 0.0000000000000000000000000000000000000000000005124 184.0
BYDH1_k127_2626988_7 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.0000000000000000000000000000000000000002566 151.0
BYDH1_k127_2626988_8 PFAM Sel1 domain protein repeat-containing protein K07126 - - 0.0000000000000000000000002018 114.0
BYDH1_k127_2626988_9 protein conserved in bacteria K09920 - - 0.000000000001478 73.0
BYDH1_k127_2691878_0 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 - 4.3.1.19 2.214e-233 730.0
BYDH1_k127_2691878_1 Efflux ABC transporter permease protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003231 367.0
BYDH1_k127_2691878_2 Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate K01807 - 5.3.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001179 329.0
BYDH1_k127_2691878_3 COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain - - - 0.00000000000000000000000000000000000000000000000000000007629 211.0
BYDH1_k127_2691878_4 Part of the ABC transporter complex LolCDE involved in the translocation of K02003 - - 0.0000000000000000000000000000000000009439 141.0
BYDH1_k127_2691878_5 - - - - 0.000000000000000008485 92.0
BYDH1_k127_2713600_0 Uncharacterized protein conserved in bacteria (DUF2169) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001264 379.0
BYDH1_k127_2713600_1 synthase K00647 - 2.3.1.41 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001182 336.0
BYDH1_k127_2713600_2 deoxyhypusine monooxygenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002167 300.0
BYDH1_k127_2713600_3 Domain of unknown function (DUF4150) - - - 0.0000000000000000000000000000000000000000000000000000001609 196.0
BYDH1_k127_2713600_4 - - - - 0.00000000000000000000000000581 117.0
BYDH1_k127_2713600_5 - - - - 0.00000000002485 71.0
BYDH1_k127_2713600_6 Diguanylate cyclase - - - 0.00000004085 55.0
BYDH1_k127_2713600_7 synthase K00647 - 2.3.1.41 0.00000005012 58.0
BYDH1_k127_2713600_9 Rhs element vgr protein - - - 0.000355 46.0
BYDH1_k127_272652_0 Zinc-uptake complex component A periplasmic K02077 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000604 363.0
BYDH1_k127_272652_1 phosphate-selective porin O and P - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004248 366.0
BYDH1_k127_272652_2 ABC-3 protein K02075 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003215 310.0
BYDH1_k127_272652_3 PFAM protein-L-isoaspartate(D-aspartate) O-methyltransferase K00573 - 2.1.1.77 0.00000000000000000000000000000000000000000000000000000000000000005648 238.0
BYDH1_k127_272652_5 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 - 4.1.99.17 0.000000000000000000000000000000000000000000000000000000001008 205.0
BYDH1_k127_2741026_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 8.645e-319 987.0
BYDH1_k127_2741026_1 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001437 524.0
BYDH1_k127_2741026_2 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 - 1.17.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001927 364.0
BYDH1_k127_2741026_3 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0042802,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008413 352.0
BYDH1_k127_2741026_4 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002957 250.0
BYDH1_k127_2741026_5 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 - - 0.000000000000000000000000000000000000000000000000003389 183.0
BYDH1_k127_2741026_6 Belongs to the bacterial ribosomal protein bL35 family K02916 - - 0.00000000000000000001436 92.0
BYDH1_k127_282758_0 peptidase M24B, X-Pro dipeptidase aminopeptidase K01262 - 3.4.11.9 1.321e-200 634.0
BYDH1_k127_282758_1 NYN domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000169 418.0
BYDH1_k127_282758_2 Ubiquinone biosynthesis hydroxylase, UbiH UbiF VisC COQ6 K03185 - - 0.000000000000000000000000000000000000000000000000000000000000000000000003715 254.0
BYDH1_k127_282758_3 Methyltransferase type 11 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000921 237.0
BYDH1_k127_282758_4 Belongs to the UPF0149 family K09895 - - 0.000000000000000000000000000002049 128.0
BYDH1_k127_282758_5 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.000000000000000000001266 100.0
BYDH1_k127_282758_6 TIGRFAM TIGR02449 family protein K09892 - - 0.000000000001762 70.0
BYDH1_k127_2858277_0 pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for K15987 - 3.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003023 574.0
BYDH1_k127_2858277_1 Sulfatase-modifying factor enzyme 1 - - - 0.00000000000000000000000000000000000000000000000000000000000001901 225.0
BYDH1_k127_2862913_0 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 0.0 1032.0
BYDH1_k127_2862913_1 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 4.874e-245 765.0
BYDH1_k127_2862913_2 Radical SAM superfamily K04069 - 1.97.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002299 604.0
BYDH1_k127_2862913_3 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 - 5.4.99.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004124 353.0
BYDH1_k127_2862913_4 Molybdenum cofactor biosynthesis K03638,K03831 - 2.7.7.75 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002648 288.0
BYDH1_k127_2862913_5 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 - - 0.000000000000000000000000000000002619 130.0
BYDH1_k127_2862913_6 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009266,GO:0009409,GO:0009628,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0030490,GO:0033554,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0042274,GO:0043021,GO:0043024,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071840,GO:0090304,GO:1901360 - 0.0000000000000000000000000000006502 126.0
BYDH1_k127_2862913_7 protein conserved in bacteria - - - 0.00005936 47.0
BYDH1_k127_2876046_0 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K13487 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007077 342.0
BYDH1_k127_2876046_1 PFAM CheR methyltransferase, SAM binding domain K13486 - - 0.000000000000000000000000000000000000000000000000000000000000001033 234.0
BYDH1_k127_2876046_2 Chase2 domain K01768 - 4.6.1.1 0.0000000000000000000000000000000000009202 148.0
BYDH1_k127_2876046_3 Two component signalling adaptor domain K13488 - - 0.000000000000000000000000001392 123.0
BYDH1_k127_2936091_0 TIGRFAM acetyl-CoA carboxylase, biotin carboxylase K01961 - 6.3.4.14,6.4.1.2 2.227e-237 739.0
BYDH1_k127_2936091_1 Ribosomal protein L11 methyltransferase K02687 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006479,GO:0006480,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0016278,GO:0016279,GO:0016740,GO:0016741,GO:0018011,GO:0018012,GO:0018022,GO:0018023,GO:0018193,GO:0018194,GO:0018205,GO:0019538,GO:0031365,GO:0032259,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0140096,GO:1901564 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009886 338.0
BYDH1_k127_2936091_2 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05540 - - 0.0000000000000000000000000000000000000000000000000000000000000000001393 233.0
BYDH1_k127_2936091_3 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.00000000000000000000000000000000000000000000000000000000133 204.0
BYDH1_k127_2936091_4 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.00000000000000000000000000000000000000000000000000002148 192.0
BYDH1_k127_2936091_5 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.000000000000000000000000000000000000000000001896 171.0
BYDH1_k127_2936091_6 Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps K04084 - 1.8.1.8 0.00000000000000000000000000000000000000005843 154.0
BYDH1_k127_2936091_7 Mj0042 family finger-like - - - 0.000000000000000000000000000000000003831 151.0
BYDH1_k127_2941742_0 Oxygen tolerance - - - 0.000000000000000000000000000000000000000000000000000006184 210.0
BYDH1_k127_2941742_1 Protein of unknown function (DUF3570) - - - 0.0000000000000000000000000000000000000000001933 171.0
BYDH1_k127_2941742_2 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000109 147.0
BYDH1_k127_2955985_0 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002072 600.0
BYDH1_k127_2955985_1 PFAM Cobyrinic acid a,c-diamide synthase K03496 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002137 377.0
BYDH1_k127_2955985_2 Belongs to the ParB family K03497 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002284 327.0
BYDH1_k127_2955985_3 HDOD domain - - - 0.0000000000000000000000000000000000000000000000000000000000000003641 238.0
BYDH1_k127_2955985_4 Specifically methylates the N7 position of guanine in position 527 of 16S rRNA K03501 - 2.1.1.170 0.00000000000000000000000000000000000000000000000000000000000008708 219.0
BYDH1_k127_2955985_5 PFAM 3-hydroxyacyl-CoA dehydrogenase K01782 - 1.1.1.35,4.2.1.17,5.1.2.3 0.0000000000000000000000000001193 116.0
BYDH1_k127_2955985_6 Thioredoxin - - - 0.00000000000000000008186 93.0
BYDH1_k127_3004612_0 Putative diguanylate phosphodiesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004298 528.0
BYDH1_k127_3004612_1 General secretion pathway protein F K02455,K02653 - - 0.0000000000000000000000000007984 113.0
BYDH1_k127_3004612_2 Rhodanese Homology Domain K03972 GO:0003674,GO:0003824,GO:0004792,GO:0005575,GO:0005623,GO:0016740,GO:0016782,GO:0016783,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0044464 - 0.0000001975 59.0
BYDH1_k127_3014963_0 Fructose-1,6-bisphosphatase K01622 - 3.1.3.11,4.1.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002378 319.0
BYDH1_k127_3014963_1 Domain of unknown function (DUF4105) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004042 276.0
BYDH1_k127_3014963_2 Prolyl oligopeptidase family K06889 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001245 263.0
BYDH1_k127_3014963_3 - - - - 0.0000000000000000000000000009526 118.0
BYDH1_k127_3026663_0 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000543 540.0
BYDH1_k127_3026663_1 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003845 512.0
BYDH1_k127_3026663_2 ubiE/COQ5 methyltransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001225 507.0
BYDH1_k127_3026663_3 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002775 506.0
BYDH1_k127_3026663_4 Protein of unknown function (DUF3641) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000154 364.0
BYDH1_k127_3026663_5 Tetratricopeptide TPR_2 repeat protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004983 379.0
BYDH1_k127_3026663_6 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 - 2.7.1.148 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006463 329.0
BYDH1_k127_3026663_7 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 - 2.1.1.297 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003373 308.0
BYDH1_k127_3026663_8 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 - - 0.00000000000000000000000000000000000000000000000000000000004882 213.0
BYDH1_k127_3026663_9 Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein K02494 GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0006807,GO:0008104,GO:0008150,GO:0008152,GO:0008289,GO:0009279,GO:0010876,GO:0016020,GO:0019538,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0033036,GO:0033218,GO:0034613,GO:0042157,GO:0042277,GO:0043170,GO:0044238,GO:0044462,GO:0044464,GO:0044872,GO:0044873,GO:0044874,GO:0051179,GO:0051641,GO:0051668,GO:0070727,GO:0071704,GO:0071723,GO:0071944,GO:0072657,GO:1901564 - 0.00000000000000000000000000000000003886 147.0
BYDH1_k127_3059389_0 Adenylate cyclase K05851 GO:0003674,GO:0003824,GO:0004016,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006171,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009187,GO:0009190,GO:0009259,GO:0009260,GO:0009975,GO:0009987,GO:0016829,GO:0016849,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046058,GO:0046390,GO:0046483,GO:0052652,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.6.1.1 1.333e-223 722.0
BYDH1_k127_3059389_1 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007308 553.0
BYDH1_k127_3059389_2 PFAM phospholipase Carboxylesterase K06999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002493 259.0
BYDH1_k127_3072952_0 major facilitator superfamily K05820 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004244 443.0
BYDH1_k127_3072952_1 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 GO:0000166,GO:0003674,GO:0003824,GO:0004107,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009423,GO:0009987,GO:0010181,GO:0016053,GO:0016829,GO:0016835,GO:0016838,GO:0019438,GO:0019752,GO:0032553,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050662,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 4.2.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008082 435.0
BYDH1_k127_3072952_2 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005081 316.0
BYDH1_k127_3072952_3 LemA Family K03744 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000008895 261.0
BYDH1_k127_3072952_4 - - - - 0.0000000000000000000000000000000000005207 144.0
BYDH1_k127_3107955_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K18138 - - 0.0 1308.0
BYDH1_k127_3107955_1 Cation transporter/ATPase, N-terminus K01537 - 3.6.3.8 0.0 1201.0
BYDH1_k127_3107955_10 peptidylprolyl isomerase K03770 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007295 455.0
BYDH1_k127_3107955_11 Predicted methyltransferase regulatory domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003179 439.0
BYDH1_k127_3107955_12 prohibitin homologues - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008268 404.0
BYDH1_k127_3107955_13 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0000413,GO:0003674,GO:0003755,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0006464,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009266,GO:0009408,GO:0009628,GO:0009987,GO:0016853,GO:0016859,GO:0018193,GO:0018208,GO:0019538,GO:0036211,GO:0042802,GO:0043021,GO:0043022,GO:0043170,GO:0043335,GO:0043412,GO:0044183,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0050896,GO:0051083,GO:0061077,GO:0071704,GO:0140096,GO:1901564 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002354 385.0
BYDH1_k127_3107955_14 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 GO:0003674,GO:0003824,GO:0004477,GO:0004486,GO:0004488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006575,GO:0006725,GO:0006730,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016645,GO:0016646,GO:0016787,GO:0016810,GO:0016814,GO:0019238,GO:0019752,GO:0034641,GO:0042558,GO:0043436,GO:0043603,GO:0044237,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0055114,GO:0071704,GO:1901360,GO:1901564 1.5.1.5,3.5.4.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002878 370.0
BYDH1_k127_3107955_15 signal transduction histidine kinase K07637 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006412 356.0
BYDH1_k127_3107955_16 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003837 332.0
BYDH1_k127_3107955_17 PFAM Polyphosphate kinase 2 (PPK2) K22468 - 2.7.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004864 329.0
BYDH1_k127_3107955_18 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001457 323.0
BYDH1_k127_3107955_19 Barrel-sandwich domain of CusB or HlyD membrane-fusion K03585 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001722 319.0
BYDH1_k127_3107955_2 Required for chromosome condensation and partitioning K03529 - - 0.0 1199.0
BYDH1_k127_3107955_20 of a CheY-like receiver domain and a winged-helix DNA-binding domain K07660 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001756 298.0
BYDH1_k127_3107955_21 Belongs to the peptidase S11 family K07262 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003049 297.0
BYDH1_k127_3107955_22 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007953 290.0
BYDH1_k127_3107955_23 tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000285 288.0
BYDH1_k127_3107955_24 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) K09457 - 1.7.1.13 0.00000000000000000000000000000000000000000000000000000000000000001309 227.0
BYDH1_k127_3107955_25 Belongs to the glutathione peroxidase family - - - 0.00000000000000000000000000000000000000000000000000000000000000002348 231.0
BYDH1_k127_3107955_26 Belongs to the SOS response-associated peptidase family - - - 0.0000000000000000000000000000000000000000000000000000000000005513 217.0
BYDH1_k127_3107955_27 YMGG-like Gly-zipper - - - 0.0000000000000000000000000000000000000000000000000000000000005739 222.0
BYDH1_k127_3107955_28 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000000000000000453 201.0
BYDH1_k127_3107955_29 molybdopterin-guanine dinucleotide biosynthesis protein K03753 - - 0.0000000000000000000000000000000000000000000000000009068 200.0
BYDH1_k127_3107955_3 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1181.0
BYDH1_k127_3107955_30 PFAM Histidine triad (HIT) protein K02503 - - 0.0000000000000000000000000000000000000000000000000058 182.0
BYDH1_k127_3107955_31 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.00000000000000000000000000000000000000000000000001782 189.0
BYDH1_k127_3107955_32 BON domain - - - 0.00000000000000000000000000000000000000000000000008308 188.0
BYDH1_k127_3107955_33 - - - - 0.0000000000000000000000000000000000000000000000002507 188.0
BYDH1_k127_3107955_34 Protein of unknown function (DUF3014) - - - 0.0000000000000000000000000000000000000000000000002813 185.0
BYDH1_k127_3107955_36 Lysin motif - - - 0.0000000000000000000000000000000000000006733 164.0
BYDH1_k127_3107955_37 Protein of unknown function (DUF615) K09889 - - 0.000000000000000000000000000000000000001964 152.0
BYDH1_k127_3107955_38 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.000000000000000000000000000000004703 129.0
BYDH1_k127_3107955_39 Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins K03528 - - 0.0000000000000000000000000000003057 134.0
BYDH1_k127_3107955_4 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 - 6.5.1.2 2.211e-272 853.0
BYDH1_k127_3107955_40 PFAM cytochrome c, class I K08738 - - 0.00000000000000000000000000005385 120.0
BYDH1_k127_3107955_41 - - - - 0.000000000000000000000000009699 113.0
BYDH1_k127_3107955_42 - - - - 0.00000000000000003246 85.0
BYDH1_k127_3107955_43 sequence-specific DNA binding K13280 - 3.4.21.89 0.00000000000000003459 85.0
BYDH1_k127_3107955_44 Protein of unknown function (DUF2934) - - - 0.0000002535 56.0
BYDH1_k127_3107955_45 rho-dependent transcription termination K19000 - - 0.00000223 53.0
BYDH1_k127_3107955_47 - - - - 0.000007308 50.0
BYDH1_k127_3107955_48 - - - - 0.000007389 48.0
BYDH1_k127_3107955_49 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 GO:0003674,GO:0003824,GO:0004477,GO:0004486,GO:0004488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006575,GO:0006725,GO:0006730,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016645,GO:0016646,GO:0016787,GO:0016810,GO:0016814,GO:0019238,GO:0019752,GO:0034641,GO:0042558,GO:0043436,GO:0043603,GO:0044237,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0055114,GO:0071704,GO:1901360,GO:1901564 1.5.1.5,3.5.4.9 0.00001225 51.0
BYDH1_k127_3107955_5 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 - - 3.084e-216 679.0
BYDH1_k127_3107955_50 Cadherin repeats. - - - 0.00006905 55.0
BYDH1_k127_3107955_6 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 - 6.1.1.16 7.438e-209 657.0
BYDH1_k127_3107955_7 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002984 579.0
BYDH1_k127_3107955_8 PFAM carbohydrate kinase K00854 - 2.7.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101 496.0
BYDH1_k127_3107955_9 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001745 469.0
BYDH1_k127_3150401_0 Belongs to the peptidase M16 family K07263 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003316 570.0
BYDH1_k127_3150401_1 PFAM Peptidase M16 K07263 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001016 494.0
BYDH1_k127_3150401_2 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03110 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001332 453.0
BYDH1_k127_3150401_3 TIGRFAM Cell division ATP-binding protein FtsE K09812 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001667 302.0
BYDH1_k127_3150401_4 Part of the ABC transporter FtsEX involved in cellular division K09811 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000006835 258.0
BYDH1_k127_3150401_5 Bacterial regulatory helix-turn-helix protein, lysR family K04761 - - 0.000000000000000000000005181 102.0
BYDH1_k127_3150401_6 membrane - - - 0.0000000000000000000006067 99.0
BYDH1_k127_3189751_0 COG0542 ATPases with chaperone activity, ATP-binding subunit K11907 - - 5.901e-297 925.0
BYDH1_k127_3189751_1 Protein tyrosine kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000153 544.0
BYDH1_k127_3189751_10 Outer membrane protein beta-barrel domain - - - 0.00000000006084 70.0
BYDH1_k127_3189751_11 Type VI secretion system, VipA, VC_A0107 or Hcp2 K11901 - - 0.00000001158 68.0
BYDH1_k127_3189751_12 COG2931, RTX toxins and related Ca2 -binding proteins - - - 0.0000003903 63.0
BYDH1_k127_3189751_2 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000271 492.0
BYDH1_k127_3189751_3 regulator of chromosome condensation, RCC1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000249 350.0
BYDH1_k127_3189751_4 Polysaccharide deacetylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002554 334.0
BYDH1_k127_3189751_5 - - - - 0.0000000000000000000000000000000000000000000000000000179 198.0
BYDH1_k127_3189751_6 Lysin motif - - - 0.000000000000000000000000000000000000000000002044 179.0
BYDH1_k127_3189751_7 type VI secretion protein K11900 - - 0.0000000000000000000000000007183 130.0
BYDH1_k127_3189751_9 histone H2A K63-linked ubiquitination - - - 0.00000000000000003192 87.0
BYDH1_k127_319954_0 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008838 514.0
BYDH1_k127_319954_1 Transcriptional regulatory protein, C terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000131 318.0
BYDH1_k127_319954_2 FAD linked - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009047 311.0
BYDH1_k127_319954_3 cyclic nucleotide-binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003176 280.0
BYDH1_k127_319954_4 - - - - 0.0000000000000000000000000000000000000000000000000000000000005425 219.0
BYDH1_k127_319954_5 Thioredoxin-like - - - 0.000000000000000000000000000000000000000000000000001913 187.0
BYDH1_k127_319954_6 PKD domain - - - 0.000000000000000000000000000000000000000007576 175.0
BYDH1_k127_319954_7 Kelch-like family member 4 K10442 GO:0000151,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005815,GO:0005856,GO:0015630,GO:0031461,GO:0031463,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044422,GO:0044424,GO:0044430,GO:0044446,GO:0044464,GO:1902494,GO:1990234 - 0.000000000000000000000000000000000007953 156.0
BYDH1_k127_319954_8 - - - - 0.000000000000009035 78.0
BYDH1_k127_3202200_0 Involved in the TonB-independent uptake of proteins K03641 GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006810,GO:0008104,GO:0008150,GO:0009719,GO:0009987,GO:0010033,GO:0010243,GO:0015031,GO:0015833,GO:0015893,GO:0017038,GO:0019904,GO:0030288,GO:0030313,GO:0031975,GO:0032153,GO:0032991,GO:0033036,GO:0042221,GO:0042493,GO:0042597,GO:0042886,GO:0042891,GO:0043213,GO:0044464,GO:0044877,GO:0045184,GO:0046677,GO:0046678,GO:0050896,GO:0051179,GO:0051234,GO:0051716,GO:0070887,GO:0071236,GO:0071237,GO:0071310,GO:0071417,GO:0071495,GO:0071702,GO:0071705,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001575 458.0
BYDH1_k127_3202200_1 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 - 4.3.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001671 343.0
BYDH1_k127_3202200_2 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) K06920 - 6.3.4.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004158 338.0
BYDH1_k127_3202200_3 PFAM MotA TolQ ExbB proton channel K03562 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002396 291.0
BYDH1_k127_3202200_4 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000001528 187.0
BYDH1_k127_3202200_5 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.00000000000000000000000000000000000000000000000002061 188.0
BYDH1_k127_3202200_6 Tol-Pal system-associated acyl-CoA thioesterase K07107 - - 0.0000000000000000000000000000000000000000000000009825 177.0
BYDH1_k127_3202200_7 Biopolymer transport protein ExbD TolR K03560 - - 0.00000000000000000000000000000000000000000003076 173.0
BYDH1_k127_3202200_8 Belongs to the ompA family K03640 GO:0005575,GO:0005623,GO:0008150,GO:0009279,GO:0009987,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031224,GO:0031230,GO:0031241,GO:0031246,GO:0031975,GO:0032153,GO:0044425,GO:0044462,GO:0044464,GO:0051301,GO:0071944,GO:0098552 - 0.000000000000000000000000000000000001495 145.0
BYDH1_k127_3202200_9 TolA C-terminal K03646 - - 0.000000000000000000000000000001348 132.0
BYDH1_k127_3225058_0 DNA polymerase III alpha subunit K02337 - 2.7.7.7 0.0 1503.0
BYDH1_k127_3225058_1 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 - 2.4.1.182 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003683 275.0
BYDH1_k127_3225058_2 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000009228 259.0
BYDH1_k127_3225058_3 His Kinase A (phosphoacceptor - - - 0.00000000000000000000000000000000000000000000000000000000000254 223.0
BYDH1_k127_3312545_0 Belongs to the acetyltransferase family. ArgA subfamily K14682 - 2.3.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005974 550.0
BYDH1_k127_3312545_1 Periplasmic component of the Tol biopolymer transport system - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001339 409.0
BYDH1_k127_3312545_2 Probable molybdopterin binding domain K03750 - 2.10.1.1 0.00000000000000000000000000000000000000000000004382 178.0
BYDH1_k127_3320204_0 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 8.685e-224 700.0
BYDH1_k127_3320204_1 Calcineurin-like phosphoesterase superfamily domain K07095 - - 0.000000000000000000000000000000000000000000000000000000000000000000005374 239.0
BYDH1_k127_3320204_2 Transcriptional regulator K13633 - - 0.00000000000000000000000000000000000000000000000000000000000001004 222.0
BYDH1_k127_3356046_0 Phosphate transport system permease protein K02038 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004163 499.0
BYDH1_k127_3356046_1 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000268 439.0
BYDH1_k127_3356046_10 Unwinds DNA duplexes with 3' to 5' polarity with respect to the bound strand and initiates unwinding most effectively when a single-stranded region is present K03657 - 3.6.4.12 0.00000000004777 63.0
BYDH1_k127_3356046_2 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U20 and U20a in tRNAs K05539 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000576 442.0
BYDH1_k127_3356046_3 Plays a role in the regulation of phosphate uptake K02039 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003802 300.0
BYDH1_k127_3356046_4 Bifunctional enzyme that catalyzes the enolization of 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P) into the intermediate 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate (HK-MTPenyl-1-P), which is then dephosphorylated to form the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK- MTPene) K09880 - 3.1.3.77 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002438 293.0
BYDH1_k127_3356046_5 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003565 277.0
BYDH1_k127_3356046_6 Peptidyl-prolyl cis-trans K03772,K03773 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000001092 197.0
BYDH1_k127_3356046_7 Molecular chaperone - - - 0.000000000000000000000000000000000000000000001379 174.0
BYDH1_k127_3356046_8 Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway K08967 - 1.13.11.53,1.13.11.54 0.0000000000000000000000000000000000000003565 152.0
BYDH1_k127_3356046_9 Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway K08967 - 1.13.11.53,1.13.11.54 0.000000000000000000000000000194 114.0
BYDH1_k127_3371068_0 A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit contributes ATPase, 3'-5' helicase, exonuclease activity and loads RecA onto ssDNA K03582,K16898 - 3.1.11.5,3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000022 456.0
BYDH1_k127_3371068_1 Belongs to the RNA methyltransferase TrmD family K00554 - 2.1.1.228 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005151 378.0
BYDH1_k127_3371068_10 PFAM Methylated-DNA- protein -cysteine S-methyltransferase DNA binding K00567 - 2.1.1.63 0.000000000000000000000000000000000006184 143.0
BYDH1_k127_3371068_11 Belongs to the bacterial ribosomal protein bS16 family K02959 GO:0000028,GO:0000217,GO:0000400,GO:0003674,GO:0003676,GO:0003677,GO:0003735,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006259,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0016787,GO:0016788,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0090305,GO:0097159,GO:0140097,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000938 128.0
BYDH1_k127_3371068_12 cheY-homologous receiver domain - - - 0.0000000000000000000000000008109 117.0
BYDH1_k127_3371068_2 TIGRFAM Tyrosine recombinase XerD K04763 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001902 383.0
BYDH1_k127_3371068_3 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003167 335.0
BYDH1_k127_3371068_4 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process K03981 - 5.3.4.1 0.0000000000000000000000000000000000000000000000000000000000000000004036 239.0
BYDH1_k127_3371068_5 TIGRFAM phosphonate ABC transporter, periplasmic phosphonate-binding protein K02044 - - 0.000000000000000000000000000000000000000000000000000000000000000007614 236.0
BYDH1_k127_3371068_6 response regulator K02485 - - 0.000000000000000000000000000000000000000000000000000000000006774 210.0
BYDH1_k127_3371068_7 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.000000000000000000000000000000000000000000000000000001646 197.0
BYDH1_k127_3371068_8 PAS fold - - - 0.00000000000000000000000000000000000000000000000000001515 194.0
BYDH1_k127_3371068_9 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 - - 0.0000000000000000000000000000000000000000000000000183 181.0
BYDH1_k127_3371843_0 TIGRFAM methionine aminopeptidase, type I K01265 - 3.4.11.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006092 426.0
BYDH1_k127_3371843_1 Belongs to the universal ribosomal protein uS2 family K02967 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002139 363.0
BYDH1_k127_3371843_2 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003715 364.0
BYDH1_k127_3371843_3 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen K00990 - 2.7.7.59 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005091 353.0
BYDH1_k127_3371843_4 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000263 343.0
BYDH1_k127_3371843_5 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003093 250.0
BYDH1_k127_3380575_0 Periplasmic binding protein domain K11959 - - 1.327e-240 748.0
BYDH1_k127_3380575_1 Belongs to the binding-protein-dependent transport system permease family K01997,K11960 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002508 576.0
BYDH1_k127_3380575_2 Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG K03189 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003201 331.0
BYDH1_k127_3380575_3 Required for maturation of urease via the functional incorporation of the urease nickel metallocenter K03188 - - 0.000000000000000000000000000000000000000000000000000000000000000004095 233.0
BYDH1_k127_3380575_4 Bacterial protein of unknown function (Gcw_chp) - - - 0.000000000000000000000000000007281 128.0
BYDH1_k127_3380575_5 Belongs to the binding-protein-dependent transport system permease family K11961 - - 0.000005772 51.0
BYDH1_k127_3402428_0 Molecular chaperone. Has ATPase activity K04079 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003516 504.0
BYDH1_k127_3402428_1 GGDEF domain containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001561 341.0
BYDH1_k127_3402428_2 Rhodanese Homology Domain - - - 0.000000000000000000000000792 110.0
BYDH1_k127_3415704_0 FAD linked - - - 0.0 1186.0
BYDH1_k127_3415704_1 Belongs to the Glu Leu Phe Val dehydrogenases family K00262 - 1.4.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002651 564.0
BYDH1_k127_3415704_10 Part of a sulfur-relay system K11179 - - 0.00000000000000000000000000000000000000000000000000004982 187.0
BYDH1_k127_3415704_11 cellulase activity - - - 0.000000000000000000000000000000000000000000000001969 190.0
BYDH1_k127_3415704_12 PFAM sigma-54 factor interaction domain-containing protein K02584,K07713 - - 0.0000000000000000000000000004002 122.0
BYDH1_k127_3415704_13 - - - - 0.00005906 52.0
BYDH1_k127_3415704_2 Histidine kinase K07636 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001248 445.0
BYDH1_k127_3415704_3 Putative S-adenosyl-L-methionine-dependent methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007039 432.0
BYDH1_k127_3415704_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000398 420.0
BYDH1_k127_3415704_5 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07657 GO:0001098,GO:0001108,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0042802,GO:0043254,GO:0044087,GO:0044424,GO:0044464,GO:0050789,GO:0050794,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:1903506,GO:2000112,GO:2000142,GO:2001141 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002594 320.0
BYDH1_k127_3415704_6 PFAM Short-chain dehydrogenase reductase SDR K03793 - 1.5.1.33 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003508 312.0
BYDH1_k127_3415704_7 histidine kinase HAMP region domain protein K03406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005307 280.0
BYDH1_k127_3415704_8 sister chromatid segregation - - - 0.000000000000000000000000000000000000000000000000000000000000000000158 239.0
BYDH1_k127_3415704_9 cellulase activity - - - 0.0000000000000000000000000000000000000000000000000000002803 212.0
BYDH1_k127_3424808_0 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03106 - 3.6.5.4 4.879e-207 652.0
BYDH1_k127_3424808_1 CBS domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003638 498.0
BYDH1_k127_3424808_2 Carbon-nitrogen hydrolase K12251 - 3.5.1.53 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002822 473.0
BYDH1_k127_3424808_3 Belongs to the agmatine deiminase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002104 466.0
BYDH1_k127_3424808_4 cAMP phosphodiesterases class-II - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001268 293.0
BYDH1_k127_3424808_5 Cytochrome c assembly protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002304 253.0
BYDH1_k127_3424808_6 DAHP synthetase I family K03856 - 2.5.1.54 0.000000000000000000000002205 104.0
BYDH1_k127_3424808_7 ABC transporter, phosphonate, periplasmic substrate-binding protein K02044 - - 0.0000000000000001412 84.0
BYDH1_k127_3459485_0 Elongation factor P--(R)-beta-lysine ligase K04568 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002614 342.0
BYDH1_k127_3459485_1 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001002 338.0
BYDH1_k127_3459485_2 Involved in peptide bond synthesis. Alleviates ribosome stalling that occurs when 3 or more consecutive Pro residues or the sequence PPG is present in a protein, possibly by augmenting the peptidyl transferase activity of the ribosome. Modification of K02356 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006414,GO:0006417,GO:0006448,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0017148,GO:0019222,GO:0019538,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0034248,GO:0034249,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0045900,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0071704,GO:0072344,GO:0080090,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:2000112,GO:2000113,GO:2001124,GO:2001125 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008039 302.0
BYDH1_k127_3459485_3 Catalyzes the ferrous insertion into protoporphyrin IX K01772 - 4.99.1.1,4.99.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000002388 250.0
BYDH1_k127_3459485_4 PFAM electron transport protein SCO1 SenC K07152 - - 0.00000000000000000000000000000000000009027 150.0
BYDH1_k127_3459485_5 Copper chaperone PCu(A)C K09796 - - 0.00000000000000004544 89.0
BYDH1_k127_3459485_6 TIGRFAM lysine 2,3-aminomutase YodO family protein K01843,K19810 - 5.4.3.2 0.00001196 50.0
BYDH1_k127_3569412_0 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001658 493.0
BYDH1_k127_3569412_1 COG0457 FOG TPR repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003896 472.0
BYDH1_k127_3569412_2 High frequency lysogenization protein HflD homolog K07153 - - 0.0000000000000000000000000000000000000000000000000000001278 201.0
BYDH1_k127_3569412_3 Zn-dependent protease with chaperone function - - - 0.000000000000000000000000000000000000000000000412 189.0
BYDH1_k127_3569412_4 Sigma-54 interaction domain - - - 0.000000002574 58.0
BYDH1_k127_357188_0 sigma54 specific, transcriptional regulator, Fis family K10941 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001197 546.0
BYDH1_k127_357188_1 PFAM response regulator receiver K10943 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001098 510.0
BYDH1_k127_357188_2 FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation K02410 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003537 449.0
BYDH1_k127_357188_3 The M ring may be actively involved in energy transduction K02409 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001625 426.0
BYDH1_k127_357188_4 Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation K10942 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008728 297.0
BYDH1_k127_357188_5 Flagellar protein export ATPase FliI K02412 - 3.6.3.14 0.00000000000000000000000000000000000000000000000000006163 192.0
BYDH1_k127_357188_6 dksA traR - - - 0.0000000000000000000000000000001593 128.0
BYDH1_k127_357188_7 Flagellar assembly protein FliH - - - 0.000000000000000000000000000222 123.0
BYDH1_k127_357188_8 PFAM flagellar hook-basal body complex protein FliE K02408 - - 0.00000000000000000000002284 102.0
BYDH1_k127_357188_9 Histidine kinase-like ATPases - - - 0.0000000000003868 70.0
BYDH1_k127_3572386_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001475 595.0
BYDH1_k127_3572386_1 pseudouridine synthase activity K06180 GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022613,GO:0031118,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 5.4.99.23 0.00000000000000000000000000000000000000000000000000000000000004933 218.0
BYDH1_k127_3572386_2 Domain of unknown function (DUF1857) - - - 0.000000000000000000000000000000000000007446 151.0
BYDH1_k127_3572386_3 endonuclease III - - - 0.000000000000000000000008016 106.0
BYDH1_k127_3597904_0 Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl- L-methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway K02169 GO:0003674,GO:0003824,GO:0004141,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008757,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009987,GO:0010340,GO:0016053,GO:0016740,GO:0016741,GO:0016787,GO:0016788,GO:0016874,GO:0016879,GO:0016882,GO:0017144,GO:0018130,GO:0019752,GO:0032259,GO:0032787,GO:0034641,GO:0042364,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0052689,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.1.197 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002296 350.0
BYDH1_k127_3597904_1 Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring K01935 GO:0003674,GO:0003824,GO:0004141,GO:0016874,GO:0016879,GO:0016882 6.3.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000004501 244.0
BYDH1_k127_3597904_2 Iron-containing alcohol dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000557 196.0
BYDH1_k127_3597904_3 The physiological role of BioH is to remove the methyl group introduced by BioC when the pimeloyl moiety is complete. It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway through the hydrolysis of the ester bonds of pimeloyl-ACP esters K02170 - 3.1.1.85 0.00000000000000000000000000000000000000000000006996 174.0
BYDH1_k127_36082_0 cytochrome C peroxidase - - - 5.567e-213 670.0
BYDH1_k127_36082_1 cytochrome C peroxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002593 593.0
BYDH1_k127_36082_2 - - - - 0.000000000000000000000000000000000000000001043 172.0
BYDH1_k127_3689609_0 FAD dependent oxidoreductase K06954 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004637 576.0
BYDH1_k127_3689609_1 Outer Membrane Lipoprotein K03098 - - 0.0000000000000000000000000000000000000000000000000000000000000000000006297 244.0
BYDH1_k127_3689609_2 Uncharacterized protein conserved in bacteria (DUF2147) - - - 0.00000000000000000000000000000000000003361 147.0
BYDH1_k127_3689609_3 Protein of unknown function (DUF1365) K09701 - - 0.0000000000000007711 79.0
BYDH1_k127_3852745_0 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 0.0 1058.0
BYDH1_k127_3852745_1 Belongs to the glycosyl hydrolase 57 family - - - 2.271e-234 737.0
BYDH1_k127_3852745_2 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 9.548e-219 688.0
BYDH1_k127_3852745_3 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 5.74e-213 667.0
BYDH1_k127_3852745_4 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 - 2.4.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008365 577.0
BYDH1_k127_3852745_5 4-alpha-glucanotransferase K00705 - 2.4.1.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007434 476.0
BYDH1_k127_3852745_6 6-phosphogluconate dehydrogenase, C-terminal domain K00033 - 1.1.1.343,1.1.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005673 450.0
BYDH1_k127_3852745_7 Belongs to the bacterial glucokinase family K00845 - 2.7.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003338 346.0
BYDH1_k127_3864683_0 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000703 335.0
BYDH1_k127_3864683_1 DNA internalization-related competence protein ComEC Rec2 K02238 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002573 289.0
BYDH1_k127_3864683_2 PFAM MotA TolQ ExbB proton channel K03561 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002445 266.0
BYDH1_k127_3864683_3 COG0848 Biopolymer transport protein K03559 - - 0.0000000000000000000000000000000000000284 149.0
BYDH1_k127_3864683_4 Belongs to the UPF0434 family K09791 - - 0.0000000000000000000000009534 104.0
BYDH1_k127_3864683_5 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.00000000001335 64.0
BYDH1_k127_3901261_0 modulator of DNA gyrase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004255 575.0
BYDH1_k127_3901261_1 Anthranilate synthase component I K01657,K01665 - 2.6.1.85,4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006685 491.0
BYDH1_k127_3901261_2 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 GO:0000270,GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006022,GO:0006807,GO:0008150,GO:0008152,GO:0008932,GO:0008933,GO:0016020,GO:0016021,GO:0016740,GO:0016757,GO:0030203,GO:0030288,GO:0030313,GO:0031224,GO:0031226,GO:0031975,GO:0042597,GO:0043170,GO:0044425,GO:0044459,GO:0044464,GO:0061783,GO:0071704,GO:0071944,GO:1901135,GO:1901564 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002752 401.0
BYDH1_k127_3901261_3 PFAM Aminotransferase, class IV K02619 - 4.1.3.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008326 292.0
BYDH1_k127_3901261_4 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 GO:0003674,GO:0003824,GO:0004798,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009165,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.4.9 0.000000000000000000000000000000000000000000000000000000000000000000000000007303 262.0
BYDH1_k127_3901261_5 COG0470 ATPase involved in DNA replication K02341 GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009360,GO:0009987,GO:0032991,GO:0034641,GO:0034645,GO:0042575,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0061695,GO:0071704,GO:0090304,GO:1901360,GO:1901576,GO:1902494,GO:1990234 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000001277 252.0
BYDH1_k127_3901261_6 PilZ domain K02676 - - 0.000000000000000000000000000000000000000000000000000006191 191.0
BYDH1_k127_3901261_7 Putative modulator of DNA gyrase - - - 0.00000000000005456 74.0
BYDH1_k127_3904951_0 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 3.104e-267 855.0
BYDH1_k127_3904951_1 Glutathione synthase ribosomal protein S6 modification enzyme (Glutaminyl transferase) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004388 598.0
BYDH1_k127_3904951_2 Peptidase_C39 like family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000971 518.0
BYDH1_k127_3904951_3 Belongs to the pirin family K06911 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001163 327.0
BYDH1_k127_3904951_4 Histidine kinase-, DNA gyrase B-, and HSP90-like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008405 293.0
BYDH1_k127_3904951_5 Protein of unknown function (DUF502) - - - 0.0000000000000000000000000000000000000000000000000005984 190.0
BYDH1_k127_3904951_6 Domain of unknown function (DUF4399) - - - 0.0000000000000000000000000000000000009703 145.0
BYDH1_k127_3904951_7 of membrane protease K07340 - - 0.000000000000000000000000004219 115.0
BYDH1_k127_3904951_8 TIGRFAM molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 - - 0.0000000000000000000000003519 108.0
BYDH1_k127_3904951_9 Sugar (and other) transporter - - - 0.0000000000000000000003301 98.0
BYDH1_k127_3908066_0 Transfers a succinyl group from succinyl-CoA to L- homoserine, forming succinyl-L-homoserine K00651 - 2.3.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000544 545.0
BYDH1_k127_3908066_1 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001977 439.0
BYDH1_k127_3908066_2 TIGRFAM formate dehydrogenase, alpha subunit, archaeal-type K00123 - 1.17.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002513 429.0
BYDH1_k127_3908066_3 Methyltransferase domain - - - 0.00000000000000000000000002236 112.0
BYDH1_k127_3927658_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.0 1164.0
BYDH1_k127_3927658_1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 2.676e-316 976.0
BYDH1_k127_3927658_10 -O-antigen K02847,K12984 - - 0.000000000000000000000000000000000000000000000000000000007048 216.0
BYDH1_k127_3927658_11 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 - - 0.0000000000000000000000000000000000000000000000000000001959 196.0
BYDH1_k127_3927658_12 Sigma 54 modulation protein / S30EA ribosomal protein - - - 0.00000000000000000000000000000000000000000000000000002843 194.0
BYDH1_k127_3927658_13 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.0000000000000000000000000000000000000000000000000006571 188.0
BYDH1_k127_3927658_14 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.000000000000000000000000000000000000000000000001214 180.0
BYDH1_k127_3927658_15 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 - - 0.0000000000000000000000000000000000000000000006906 166.0
BYDH1_k127_3927658_16 Glycosyl transferase 4-like domain - - - 0.00000000000000000000000000000000000000000004808 173.0
BYDH1_k127_3927658_17 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000000000000000000000000004139 153.0
BYDH1_k127_3927658_18 Uncharacterized ACR, COG1678 - - - 0.000000000000000000003659 101.0
BYDH1_k127_3927658_19 - - - - 0.00000000000000000009967 95.0
BYDH1_k127_3927658_2 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 4.782e-270 839.0
BYDH1_k127_3927658_20 ATP synthase I chain K02116 - - 0.000000000001007 73.0
BYDH1_k127_3927658_22 - - - - 0.00000000003396 70.0
BYDH1_k127_3927658_3 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 1.085e-257 798.0
BYDH1_k127_3927658_4 Belongs to the peptidase S1C family K04771,K04772 - 3.4.21.107 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001675 524.0
BYDH1_k127_3927658_5 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042 - 2.3.1.157,2.7.7.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002338 515.0
BYDH1_k127_3927658_6 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005585 490.0
BYDH1_k127_3927658_7 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004769 403.0
BYDH1_k127_3927658_8 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004427 387.0
BYDH1_k127_3927658_9 COG0209 Ribonucleotide reductase, alpha subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001299 350.0
BYDH1_k127_3940007_0 TIGRFAM ribonuclease, Rne Rng family K08301 - - 2.534e-205 649.0
BYDH1_k127_3940007_1 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate K00147 GO:0003674,GO:0003824,GO:0004350,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006560,GO:0006561,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016491,GO:0016620,GO:0016903,GO:0017144,GO:0018130,GO:0019752,GO:0042802,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0055114,GO:0055129,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.2.1.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003246 604.0
BYDH1_k127_3940007_2 Protein of unknown function - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002036 565.0
BYDH1_k127_3940007_3 dna polymerase III delta subunit K02340 GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009360,GO:0009987,GO:0032991,GO:0034641,GO:0034645,GO:0042575,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0061695,GO:0071704,GO:0090304,GO:1901360,GO:1901576,GO:1902494,GO:1990234 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005528 331.0
BYDH1_k127_3940007_4 Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K11206 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006801 261.0
BYDH1_k127_3940007_5 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 - 2.1.1.177 0.000000000000000000000000000000000000000000000000000000000000001248 222.0
BYDH1_k127_3940007_6 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.0000000000000000000000000000000000000000000000000000000001148 220.0
BYDH1_k127_3940007_7 Maf-like protein K06287 - - 0.0000000000000000000000000000000000000000000000000000000001346 211.0
BYDH1_k127_3940007_8 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006417,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0017148,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0034248,GO:0034249,GO:0043021,GO:0043023,GO:0044087,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0080090,GO:0090069,GO:0090071,GO:2000112,GO:2000113 - 0.000000000000000000000000000000000000000283 153.0
BYDH1_k127_4002536_0 Catalyzes the biosynthesis of agmatine from arginine K01585 - 4.1.1.19 3.741e-253 796.0
BYDH1_k127_4002536_1 HupE / UreJ protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002642 350.0
BYDH1_k127_4002536_2 Histidine kinase K02482 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000325 351.0
BYDH1_k127_4002536_3 Transporter associated domain K03699 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000001697 254.0
BYDH1_k127_4002536_4 response regulator receiver K13041 - - 0.00000000000000000000000000000000000000000000000000000000000008879 220.0
BYDH1_k127_4002536_5 Belongs to the P(II) protein family K04751,K04752 - - 0.0000000000000000000000000000143 120.0
BYDH1_k127_4002536_6 Transporter associated domain K03699 - - 0.0000000000000000000000001984 117.0
BYDH1_k127_400774_0 Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate K01952 - 6.3.5.3 5.2e-322 998.0
BYDH1_k127_400774_1 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 1.595e-245 766.0
BYDH1_k127_400774_2 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002555 549.0
BYDH1_k127_400774_3 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001163 496.0
BYDH1_k127_400774_4 peptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004409 274.0
BYDH1_k127_400774_5 PFAM Pentapeptide - - - 0.000000000000000000000000000000000000009934 155.0
BYDH1_k127_400774_6 - - - - 0.00000000007948 67.0
BYDH1_k127_4008195_0 COG4992 Ornithine acetylornithine aminotransferase K00821 - 2.6.1.11,2.6.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003361 494.0
BYDH1_k127_4008195_1 Hydantoinase B/oxoprolinase K01474 - 3.5.2.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002945 398.0
BYDH1_k127_4008195_2 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003656 335.0
BYDH1_k127_4061847_0 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K07277 - - 1.04e-244 778.0
BYDH1_k127_4061847_1 zinc metalloprotease K11749 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002321 426.0
BYDH1_k127_4061847_2 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006721,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016114,GO:0016491,GO:0016614,GO:0016616,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0030145,GO:0030604,GO:0032787,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046490,GO:0046872,GO:0046914,GO:0048037,GO:0050661,GO:0050662,GO:0051483,GO:0051484,GO:0055114,GO:0070402,GO:0071704,GO:0090407,GO:0097159,GO:1901135,GO:1901265,GO:1901363,GO:1901576 1.1.1.267 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004267 394.0
BYDH1_k127_4061847_3 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006232 370.0
BYDH1_k127_4061847_4 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005203 345.0
BYDH1_k127_4061847_5 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 - 4.2.1.59 0.00000000000000000000000000000000000000000000000000001236 194.0
BYDH1_k127_4061847_6 Belongs to the skp family K06142 - - 0.000000000000000000000000000000000000000831 155.0
BYDH1_k127_4164477_0 C-methyltransferase C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001901 612.0
BYDH1_k127_4164477_1 Polysaccharide biosynthesis protein K01709 - 4.2.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004031 526.0
BYDH1_k127_4164477_2 C-methyltransferase C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009293 500.0
BYDH1_k127_4164477_3 O-linked N-acetylglucosamine transferase, SPINDLY family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006063 519.0
BYDH1_k127_4164477_4 O-linked N-acetylglucosamine transferase, SPINDLY family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000248 467.0
BYDH1_k127_4164477_5 Nucleotidyl transferase K00978 - 2.7.7.33 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003571 451.0
BYDH1_k127_4164477_6 repeat-containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006433 486.0
BYDH1_k127_4164477_7 Cephalosporin hydroxylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004561 410.0
BYDH1_k127_4164477_8 NAD dependent epimerase/dehydratase family K19180 - 1.1.1.339 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002845 381.0
BYDH1_k127_4164477_9 Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose K01790 - 5.1.3.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001917 309.0
BYDH1_k127_4174241_0 TIGRFAM ATPase, P-type, K Mg Cd Cu Zn Na Ca Na H-transporter K01539 - 3.6.3.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001603 600.0
BYDH1_k127_4174241_1 TIGRFAM hydrolase, TatD family K03424 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004158 338.0
BYDH1_k127_4174241_2 Sensor histidine kinase, PAS, PAS, PAS and PAS domain-containing - - - 0.00000000000001213 73.0
BYDH1_k127_4174241_3 COG3209 Rhs family protein - - - 0.000000207 63.0
BYDH1_k127_4201845_0 SCP-2 sterol transfer family - - - 0.00000000000000000000000000000000000000000000000000000000000000002961 227.0
BYDH1_k127_4201845_1 COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain - - - 0.0000000000000000000000000000000000000000000000000000000007955 216.0
BYDH1_k127_4201845_2 alpha-ribazole phosphatase activity - - - 0.000000000000000000000000000000000000000000000000000537 190.0
BYDH1_k127_4201845_3 GIY-YIG catalytic domain K07461 - - 0.00000000000000000005268 93.0
BYDH1_k127_4209055_0 acyl-CoA dehydrogenase activity K00249 - 1.3.8.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001735 510.0
BYDH1_k127_4209055_1 lipolytic protein G-D-S-L family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000008107 315.0
BYDH1_k127_4209055_2 Acyltransferase family - - - 0.00000000000000000000000000006674 129.0
BYDH1_k127_4209055_3 acyl carrier protein - - - 0.000000000000000000000282 98.0
BYDH1_k127_4209055_4 PFAM SMP-30 Gluconolaconase - - - 0.000000000000000000002024 110.0
BYDH1_k127_4316846_0 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001049 526.0
BYDH1_k127_4316846_1 histidine kinase A domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005166 402.0
BYDH1_k127_4316846_2 - - - - 0.0003561 48.0
BYDH1_k127_4362762_0 type I secretion outer membrane protein, TolC K12340 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001898 351.0
BYDH1_k127_4362762_1 PFAM protein-L-isoaspartate(D-aspartate) O-methyltransferase K00573 - 2.1.1.77 0.00000000000000000000000000000000000000000000000000000000000000000000005566 246.0
BYDH1_k127_4362762_2 Rhodanese Homology Domain - - - 0.000000000000000000000000000000000000008217 147.0
BYDH1_k127_4362762_3 Belongs to the peptidase S8 family K14645 - - 0.0000000000000000000001338 107.0
BYDH1_k127_4399044_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 1.632e-215 693.0
BYDH1_k127_4399044_1 Polysulphide reductase, NrfD K00185 - - 6.237e-210 661.0
BYDH1_k127_4399044_10 Cytochrome c - - - 0.0000000000000000000000000000000000000000000001181 174.0
BYDH1_k127_4399044_11 Protein of unknown function (DUF3341) - - - 0.0000000000000000000000000000000000000000002378 166.0
BYDH1_k127_4399044_12 stringent starvation protein B K03600 - - 0.00000000000000000000000000000000000001622 148.0
BYDH1_k127_4399044_13 Universal stress protein K06149 - - 0.0000000000000000000000000000000006907 135.0
BYDH1_k127_4399044_14 Tetratricopeptide repeat - - - 0.000000000000000000000000000394 124.0
BYDH1_k127_4399044_15 Biopolymer transport protein ExbD/TolR - - - 0.000000000000000000002217 98.0
BYDH1_k127_4399044_16 - - - - 0.000000000000001603 80.0
BYDH1_k127_4399044_2 Tetratricopeptide repeat - - - 9.662e-195 641.0
BYDH1_k127_4399044_3 4Fe-4S dicluster domain K00184 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003601 375.0
BYDH1_k127_4399044_4 Putative diguanylate phosphodiesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008442 383.0
BYDH1_k127_4399044_5 Polysulphide reductase, NrfD - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006661 296.0
BYDH1_k127_4399044_6 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006301 301.0
BYDH1_k127_4399044_7 stringent starvation protein A K03599 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001359 270.0
BYDH1_k127_4399044_8 MotA/TolQ/ExbB proton channel family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002719 253.0
BYDH1_k127_4399044_9 Cytochrome c7 and related cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000002248 200.0
BYDH1_k127_4439397_0 Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. Also shows phosphatase, 2'- nucleotidase and 2',3'-cyclic phosphodiesterase activities. These phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases K00974 - 2.7.7.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007411 537.0
BYDH1_k127_4439397_1 PFAM Aldehyde dehydrogenase K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001053 535.0
BYDH1_k127_4439397_10 PFAM Glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.000000000000000000000000000005284 124.0
BYDH1_k127_4439397_11 Outer membrane lipoprotein - - - 0.00000000000000000000001966 110.0
BYDH1_k127_4439397_12 Sel1-like repeats. K07126 - - 0.0000000000003201 75.0
BYDH1_k127_4439397_13 Putative beta-barrel porin-2, OmpL-like. bbp2 - - - 0.000002257 59.0
BYDH1_k127_4439397_2 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006024 547.0
BYDH1_k127_4439397_3 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) K08309 GO:0000270,GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005623,GO:0006022,GO:0006026,GO:0006027,GO:0006807,GO:0008150,GO:0008152,GO:0008932,GO:0008933,GO:0009056,GO:0009057,GO:0009253,GO:0009274,GO:0016740,GO:0016757,GO:0030203,GO:0030288,GO:0030312,GO:0030313,GO:0031975,GO:0042597,GO:0043170,GO:0044464,GO:0061783,GO:0071704,GO:0071944,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001933 447.0
BYDH1_k127_4439397_4 zinc protease protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008883 347.0
BYDH1_k127_4439397_5 NAD-dependent epimerase dehydratase K00329,K00356 - 1.6.5.3,1.6.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004452 322.0
BYDH1_k127_4439397_6 protein conserved in bacteria K09859 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007143 323.0
BYDH1_k127_4439397_7 COG3417 Collagen-binding surface adhesin SpaP (antigen I II family) K07337 - - 0.0000000000000000000000000000000000000000000000000000000000000000000008048 242.0
BYDH1_k127_4439397_8 LPP20 lipoprotein - - - 0.00000000000000000000000000000000000000000000000858 184.0
BYDH1_k127_4439397_9 LPP20 lipoprotein - - - 0.00000000000000000000000000000002018 134.0
BYDH1_k127_4508750_0 PFAM aminotransferase class V K00830 - 2.6.1.44,2.6.1.45,2.6.1.51 1.019e-201 634.0
BYDH1_k127_4508750_1 TIGRFAM Arsenical-resistance protein K03325 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003016 547.0
BYDH1_k127_4508750_10 - - - - 0.0000000000000000000000000001 117.0
BYDH1_k127_4508750_2 PFAM permease K07089 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007188 485.0
BYDH1_k127_4508750_3 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K03320 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001382 421.0
BYDH1_k127_4508750_4 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004194 383.0
BYDH1_k127_4508750_5 SMART Protein-tyrosine phosphatase, low molecular weight K03741 - 1.20.4.1 0.000000000000000000000000000000000000000000000000000000001047 207.0
BYDH1_k127_4508750_6 PFAM OsmC family protein - - - 0.0000000000000000000000000000000000000000000000000001074 190.0
BYDH1_k127_4508750_7 helix_turn_helix, Arsenical Resistance Operon Repressor K03892 - - 0.00000000000000000000000000000000000000001383 156.0
BYDH1_k127_4508750_8 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 0.000000000000000000000000000000000004055 140.0
BYDH1_k127_4508750_9 Thioredoxin domain - - - 0.00000000000000000000000000000000000894 138.0
BYDH1_k127_4546709_0 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009617 602.0
BYDH1_k127_4546709_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000167 453.0
BYDH1_k127_4546709_2 PFAM SNARE associated Golgi protein K03975 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001343 299.0
BYDH1_k127_4546709_3 Alpha/beta hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005488 280.0
BYDH1_k127_4546709_4 Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate K08289 - 2.1.2.2 0.0000000000000000000000000000000004743 132.0
BYDH1_k127_4546709_5 Concanavalin A-like lectin/glucanases superfamily - - - 0.000007199 51.0
BYDH1_k127_4562094_0 Type IV pili methyl-accepting chemotaxis transducer N-term K02660 - - 6.309e-209 670.0
BYDH1_k127_4562094_1 glutamate--cysteine ligase K01919 - 6.3.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001098 576.0
BYDH1_k127_4562094_2 Signal transducing histidine kinase, homodimeric domain K02487,K06596 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003913 417.0
BYDH1_k127_4562094_3 response regulator K02657 - - 0.00000000000000000000000000000000000000000000000000000000000008257 214.0
BYDH1_k127_4562094_4 cheY-homologous receiver domain K02658 - - 0.0000000000000000000000000000000000000000000000005845 177.0
BYDH1_k127_4562094_5 COG1352 Methylase of chemotaxis methyl-accepting proteins K00575,K02661 - 2.1.1.80 0.000000000000000000000000000000000000000000000004823 183.0
BYDH1_k127_4562094_6 Type IV pili signal transduction protein PilI K02659 - - 0.00000000000000000000000000000000000001699 155.0
BYDH1_k127_4562094_7 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.000000000000000000000001081 108.0
BYDH1_k127_4581582_0 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008987,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016053,GO:0017144,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0019805,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046496,GO:0046874,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.5.1.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002233 472.0
BYDH1_k127_4581582_1 Mortierella verticillata NRRL 6337 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004539 311.0
BYDH1_k127_4581582_2 PFAM NUDIX hydrolase K01515 - 3.6.1.13 0.000000000000000000000000000000000000000000000000000000000001113 214.0
BYDH1_k127_4581582_3 - - - - 0.0000000000000000000000000003598 132.0
BYDH1_k127_4581582_4 Serine protease with a broad substrate specificity K17734 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005488,GO:0005509,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0016787,GO:0017171,GO:0019538,GO:0043167,GO:0043169,GO:0043170,GO:0044238,GO:0046872,GO:0070011,GO:0071704,GO:0140096,GO:1901564 - 0.0000000000000000000000001794 124.0
BYDH1_k127_4581582_5 - - - - 0.000000000002058 74.0
BYDH1_k127_4587067_0 Belongs to the citrate synthase family K01647 - 2.3.3.1 5.283e-205 645.0
BYDH1_k127_4587067_1 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 - 1.1.1.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009899 345.0
BYDH1_k127_4587067_2 Bacterial transferase hexapeptide (six repeats) - - - 0.0000000000000000000000000000000000000000000000000000000000000000001215 234.0
BYDH1_k127_4587067_3 - - - - 0.0000000000000000000000000000000000000000000005885 168.0
BYDH1_k127_4587067_4 Glutaredoxin - - - 0.000000000000000000003068 99.0
BYDH1_k127_4587067_5 Conserved repeat domain - - - 0.0006047 52.0
BYDH1_k127_4684311_0 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 GO:0000976,GO:0001067,GO:0001130,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006282,GO:0006351,GO:0006355,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009432,GO:0009605,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0009991,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031668,GO:0032774,GO:0032991,GO:0032993,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0042802,GO:0043170,GO:0043565,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0045892,GO:0045934,GO:0046483,GO:0048519,GO:0048523,GO:0048583,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051716,GO:0060255,GO:0065007,GO:0071496,GO:0071704,GO:0080090,GO:0080134,GO:0080135,GO:0090304,GO:0097159,GO:0097659,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2001020,GO:2001141 3.4.21.88 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001308 273.0
BYDH1_k127_4684311_1 Component of the SOS system and an inhibitor of cell division. Accumulation of SulA causes rapid cessation of cell division and the appearance of long, non-septate filaments. In the presence of GTP, binds a polymerization-competent form of FtsZ in a 1 1 ratio, thus inhibiting FtsZ polymerization and therefore preventing it from participating in the assembly of the Z ring. This mechanism prevents the premature segregation of damaged DNA to daughter cells during cell division K14160 - - 0.000000000000000000000000000000000000000000000000000000000000001461 223.0
BYDH1_k127_4684311_2 TIGRFAM Addiction module killer protein - - - 0.000000000000000000000000000000000001138 141.0
BYDH1_k127_4684311_3 addiction module antidote protein - - - 0.000000000000000000000000000000000001571 141.0
BYDH1_k127_4684311_4 Protein of unknown function (DUF3592) - - - 0.00000002236 61.0
BYDH1_k127_4686468_0 NMT1-like family - - - 2.203e-202 636.0
BYDH1_k127_4686468_1 COG0600 ABC-type nitrate sulfonate bicarbonate transport system, permease component K15577 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002072 417.0
BYDH1_k127_4686468_2 TIGRFAM nitrate ABC transporter, ATPase subunits C and D K15578 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005913 413.0
BYDH1_k127_4686468_3 Pyridine nucleotide-disulphide oxidoreductase K00362,K05297 - 1.18.1.1,1.7.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001151 356.0
BYDH1_k127_4686468_4 PFAM response regulator receiver K07183 - - 0.00000000000000000000000000000000000000000000000000000000004322 211.0
BYDH1_k127_4686468_5 metallopeptidase activity - - - 0.0000000000000000000000000000000000000000000000000000000005006 219.0
BYDH1_k127_468720_0 lipoprotein releasing system, transmembrane protein, LolC E family K09808 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000808 537.0
BYDH1_k127_468720_1 COG1157 Flagellar biosynthesis type III secretory pathway ATPase K02412 GO:0003674,GO:0005488,GO:0005515,GO:0042802 3.6.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001321 494.0
BYDH1_k127_468720_2 Part of the ABC transporter complex LolCDE involved in the translocation of K09810 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0015399,GO:0015405,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0034613,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0043167,GO:0043168,GO:0043492,GO:0044425,GO:0044459,GO:0044464,GO:0044872,GO:0044873,GO:0044874,GO:0051179,GO:0051234,GO:0051641,GO:0055085,GO:0070727,GO:0071944,GO:0072657,GO:0089705,GO:0097159,GO:0097367,GO:0098796,GO:0098797,GO:1901265,GO:1901363,GO:1990778 - 0.00000000000000000000000000000000000000000000000000000002359 201.0
BYDH1_k127_468720_3 Helix-turn-helix XRE-family like proteins K21498 - - 0.00000000000000000000000000000000008451 134.0
BYDH1_k127_468720_4 RelE-like toxin of type II toxin-antitoxin system HigB K07334 - - 0.00000000000000000000000003246 110.0
BYDH1_k127_4705416_0 ABC-type uncharacterized transport system - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001582 471.0
BYDH1_k127_4705416_1 pfam abc K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000187 398.0
BYDH1_k127_4705416_2 PFAM Hydantoinase oxoprolinase K01473 - 3.5.2.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006924 398.0
BYDH1_k127_4705416_3 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007355 273.0
BYDH1_k127_4705416_4 Protoglobin K13590,K21019 - 2.7.7.65 0.000000000000000000000000000000000000000000000000000000000000000000001162 249.0
BYDH1_k127_4833207_0 it can initiate unwinding at a nick in the DNA. It binds to the single-stranded DNA and acts in a progressive fashion along the DNA in the 3' to 5' direction K03656,K03657 GO:0003674,GO:0003678,GO:0003824,GO:0004003,GO:0004386,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006268,GO:0006725,GO:0006807,GO:0006996,GO:0007049,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009628,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022402,GO:0032392,GO:0032508,GO:0034641,GO:0034645,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044786,GO:0044787,GO:0046483,GO:0050896,GO:0051276,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:1901360,GO:1901576 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001604 284.0
BYDH1_k127_4833207_1 PFAM Formylglycine-generating sulfatase enzyme K18912 - 1.14.99.50 0.00000000000000000000000000000000000000000000000000000000000000000000000000008414 268.0
BYDH1_k127_4833207_2 Sel1 domain protein repeat-containing protein K07126 - - 0.000000000000000000000000000000000000000000001498 173.0
BYDH1_k127_4833207_3 PFAM Formylglycine-generating sulfatase enzyme - - - 0.000000000000000000000000000000000000000002672 171.0
BYDH1_k127_4833207_4 Pentapeptide repeats (9 copies) - - - 0.000000000000001063 83.0
BYDH1_k127_4838688_0 - - - - 2.972e-272 856.0
BYDH1_k127_4838688_1 PFAM Metal-dependent phosphohydrolase, HD K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001651 476.0
BYDH1_k127_4838688_10 - - - - 0.00000000522 61.0
BYDH1_k127_4838688_2 ABC transporter, phosphonate, periplasmic substrate-binding protein K02044 - - 0.0000000000000000000000000000000000000000000000000000000000000000006727 239.0
BYDH1_k127_4838688_3 Domain of unknown function (DUF4382) - - - 0.000000000000000000000000000000000000000000000000000005197 201.0
BYDH1_k127_4838688_4 Glutathione S-transferase, N-terminal domain K00799 - 2.5.1.18 0.00000000000000000000000000000000000000000000007815 178.0
BYDH1_k127_4838688_5 Polyketide cyclase / dehydrase and lipid transport - - - 0.0000000000000000000000000000000000000000000007171 177.0
BYDH1_k127_4838688_6 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.0000000000000000000000000000001227 130.0
BYDH1_k127_4838688_7 PFAM cytochrome c class I K08738 - - 0.000000000000000001057 97.0
BYDH1_k127_4838688_8 TIGRFAM Diguanylate cyclase - - - 0.000000000003416 68.0
BYDH1_k127_4838688_9 RNA pseudouridylate synthase K06177 - 5.4.99.28,5.4.99.29 0.000000000005268 69.0
BYDH1_k127_4856072_0 PEP-utilising enzyme, mobile domain K01007 - 2.7.9.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007169 546.0
BYDH1_k127_4871897_0 Belongs to the transferase hexapeptide repeat family K00674 - 2.3.1.117 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004413 475.0
BYDH1_k127_4871897_1 Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls K01439 GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009014,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016053,GO:0016787,GO:0016810,GO:0016811,GO:0019752,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046451,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 3.5.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002108 399.0
BYDH1_k127_4871897_2 His Kinase A (phospho-acceptor) domain K02484,K07645 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003269 352.0
BYDH1_k127_4871897_3 Transcriptional regulatory protein, C terminal K02483 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000008803 262.0
BYDH1_k127_4871897_4 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000006448 200.0
BYDH1_k127_4935561_0 ABC transporter substrate-binding protein PnrA-like K02058 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003778 506.0
BYDH1_k127_4935561_1 Nucleoside-binding outer membrane protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003871 312.0
BYDH1_k127_4935561_2 FCD - - - 0.000000000000000000000000000000000000000000000000000000000000000000000005998 250.0
BYDH1_k127_4935561_3 fatty acid desaturase - - - 0.00000000000000000000000000000000000000000000000000000003167 201.0
BYDH1_k127_4935561_4 PFAM Branched-chain amino acid transport system permease component K02057 - - 0.000000000000001959 78.0
BYDH1_k127_4960828_0 PFAM aldo keto reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001607 448.0
BYDH1_k127_4960828_1 PFAM HNH endonuclease - - - 0.000000000000000000000000000000000000000000000007748 174.0
BYDH1_k127_4960828_2 Belongs to the UPF0225 family K09858 - - 0.000000000000000000000000000000000000000000614 160.0
BYDH1_k127_4960828_3 PFAM Cold-shock protein, DNA-binding K03704 - - 0.00000000000000000000000000000147 121.0
BYDH1_k127_4960828_4 DEAD-box RNA helicase involved in ribosome assembly. Has RNA-dependent ATPase activity and unwinds double-stranded RNA K11927 GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006807,GO:0006950,GO:0006996,GO:0008026,GO:0008150,GO:0008152,GO:0008186,GO:0009266,GO:0009408,GO:0009628,GO:0009987,GO:0010501,GO:0016043,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0034641,GO:0042254,GO:0042255,GO:0042623,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0065003,GO:0070035,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0140098,GO:1901360 3.6.4.13 0.000000000000000000000002495 105.0
BYDH1_k127_4965584_0 AMP-binding enzyme C-terminal domain K00666 - - 1.395e-255 801.0
BYDH1_k127_4965584_1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg K00174 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005168 600.0
BYDH1_k127_4965584_2 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K00170 - 1.2.7.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001347 483.0
BYDH1_k127_4965584_3 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006256 436.0
BYDH1_k127_4965584_4 Heat shock 70 kDa protein K04043 - - 0.00000000000000000000000000000000000000000000000000000000000000000000002911 245.0
BYDH1_k127_4965584_5 2-oxoacid acceptor oxidoreductase, gamma subunit, pyruvate 2-ketoisovalerate K00172 - 1.2.7.1 0.0000000000000000000000000005952 113.0
BYDH1_k127_5026551_0 Putative amidoligase enzyme (DUF2126) - - - 0.0 1483.0
BYDH1_k127_5026551_1 Circularly permuted ATP-grasp type 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004293 481.0
BYDH1_k127_5026551_2 PFAM 20S proteasome, A and B subunits K07395 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001235 325.0
BYDH1_k127_5089951_0 Glycosyltransferase like family 2 K20534 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004303 425.0
BYDH1_k127_5089951_1 Polysaccharide biosynthesis protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001815 396.0
BYDH1_k127_5089951_2 TIGRFAM asparagine synthase (glutamine-hydrolyzing) K01953 - 6.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002583 320.0
BYDH1_k127_5089951_3 Glycosyltransferase like family 2 K20444 - - 0.00000000000000000000000000000000000000000000000000000000000000000000009821 250.0
BYDH1_k127_5089951_4 thiolester hydrolase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000001672 238.0
BYDH1_k127_5089951_5 Glycosyl transferase, family 2 - - - 0.00000000000000000000000000000000000000000000004521 182.0
BYDH1_k127_5089951_6 PFAM GCN5-related N-acetyltransferase - - - 0.0000000000000000000000000000000000000000000001489 176.0
BYDH1_k127_5089951_7 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.00000000000000000000000724 117.0
BYDH1_k127_510159_0 TIGRFAM asparagine synthase (glutamine-hydrolyzing) K01953 - 6.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008026 365.0
BYDH1_k127_510159_1 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 - 3.2.2.23,4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005316 281.0
BYDH1_k127_510159_2 PFAM thioesterase superfamily K10806 - - 0.000000000000000000000000000000000000000000003712 168.0
BYDH1_k127_5139067_0 Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions K21071 - 2.7.1.11,2.7.1.90 1.212e-235 733.0
BYDH1_k127_5139067_1 Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis K03688 - - 2.052e-219 693.0
BYDH1_k127_5139067_10 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions K01507 - 3.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002258 279.0
BYDH1_k127_5139067_11 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.0000000000000000000000000000000000000000000000000000000000000001198 225.0
BYDH1_k127_5139067_12 organic phosphonate transport K02044 - - 0.000000000000000000000000000000000000000000000000000001168 204.0
BYDH1_k127_5139067_13 Protein of unknown function (DUF971) - - - 0.00000000000000000000000000000000000000000000000000001621 195.0
BYDH1_k127_5139067_14 Belongs to the ALAD family K01698 - 4.2.1.24 0.0000000000000000000000000000000000000000000000000009876 186.0
BYDH1_k127_5139067_15 histidine kinase HAMP region domain protein K03406 - - 0.00000000000000000000000000000000000000000000000004135 194.0
BYDH1_k127_5139067_16 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03214 - - 0.000000000000000000000000000000000000000000001922 173.0
BYDH1_k127_5139067_17 Sterol-binding domain protein K03690 - - 0.000000000000000000000000000000000000000000002536 174.0
BYDH1_k127_5139067_18 protein conserved in bacteria K09921 - - 0.000000000000000000000000000000000000000002684 163.0
BYDH1_k127_5139067_19 Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin K03636 - - 0.0000000000000000003659 90.0
BYDH1_k127_5139067_2 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 6.474e-207 656.0
BYDH1_k127_5139067_20 Outer membrane lipoprotein K07285 - - 0.0000000005577 71.0
BYDH1_k127_5139067_3 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004524 382.0
BYDH1_k127_5139067_4 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) K03183 GO:0003674,GO:0003824,GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0008150,GO:0008152,GO:0008168,GO:0008169,GO:0008425,GO:0008757,GO:0009058,GO:0009108,GO:0009233,GO:0009234,GO:0009987,GO:0016740,GO:0016741,GO:0030580,GO:0032259,GO:0042180,GO:0042181,GO:0043333,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0051186,GO:0051188,GO:0071704,GO:1901576,GO:1901661,GO:1901663 2.1.1.163,2.1.1.201 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001448 376.0
BYDH1_k127_5139067_5 Belongs to the 'phage' integrase family. XerC subfamily K03733 GO:0000150,GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006259,GO:0006276,GO:0006310,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008907,GO:0009009,GO:0009037,GO:0009987,GO:0015074,GO:0032991,GO:0034641,GO:0042150,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0048476,GO:0071139,GO:0071704,GO:0090304,GO:0097159,GO:0140097,GO:1901360,GO:1901363 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000508 360.0
BYDH1_k127_5139067_6 cation diffusion facilitator family transporter K16264 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004924 351.0
BYDH1_k127_5139067_7 Fumarylacetoacetate (FAA) hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007441 347.0
BYDH1_k127_5139067_8 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000381 305.0
BYDH1_k127_5139067_9 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 - 3.4.25.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001184 290.0
BYDH1_k127_5142167_0 PFAM cytochrome c oxidase subunit I K00404 - 1.9.3.1 9.872e-272 840.0
BYDH1_k127_5142167_1 Spermidine synthase K00797 - 2.5.1.16 1.854e-215 698.0
BYDH1_k127_5142167_10 PFAM response regulator receiver - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001805 359.0
BYDH1_k127_5142167_11 Phosphotransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001935 332.0
BYDH1_k127_5142167_13 oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor K00404 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000141 289.0
BYDH1_k127_5142167_15 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001431 248.0
BYDH1_k127_5142167_16 PFAM Glyoxalase bleomycin resistance protein dioxygenase K07032 - - 0.0000000000000000000000000000000000000000000000000000000000000000000009445 238.0
BYDH1_k127_5142167_17 cytochrome - - - 0.0000000000000000000000000000000000000000000000000000000000004638 220.0
BYDH1_k127_5142167_18 Cytochrome c - - - 0.000000000000000000000000000000000000000000000000000000000005308 214.0
BYDH1_k127_5142167_19 ATP-dependent protease La (LON) substrate-binding domain K07157 - - 0.000000000000000000000000000000000000000000000000000000000006682 213.0
BYDH1_k127_5142167_2 Reutilizes the intact tripeptide L-alanyl-gamma-D- glutamyl-meso-diaminopimelate by linking it to UDP-N- acetylmuramate K02558 - 6.3.2.45 6.58e-200 632.0
BYDH1_k127_5142167_20 COG0526, thiol-disulfide isomerase and thioredoxins - - - 0.000000000000000000000000000000000000000000000000000007559 194.0
BYDH1_k127_5142167_21 - - - - 0.00000000000000000000000000000000000000000000000003596 192.0
BYDH1_k127_5142167_22 PFAM ApaG domain protein K06195 - - 0.00000000000000000000000000000000000000000000000005736 181.0
BYDH1_k127_5142167_23 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000001631 184.0
BYDH1_k127_5142167_24 Cytochrome c - - - 0.0000000000000000000000000000000000000000000001248 173.0
BYDH1_k127_5142167_25 - - - - 0.000000000000000000000000000000000000001676 153.0
BYDH1_k127_5142167_26 - - - - 0.00000000000000000000000000000000006404 139.0
BYDH1_k127_5142167_27 - - - - 0.00000000000000000000000000000000006993 138.0
BYDH1_k127_5142167_28 - - - - 0.00000000000000000000000000001071 130.0
BYDH1_k127_5142167_3 4 iron, 4 sulfur cluster binding K02574 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000307 514.0
BYDH1_k127_5142167_30 - - - - 0.0000000000000000000000003556 107.0
BYDH1_k127_5142167_31 SNARE associated Golgi protein - - - 0.0000000000000000000000009021 110.0
BYDH1_k127_5142167_32 regulator - - - 0.0000000000000000000000009685 115.0
BYDH1_k127_5142167_33 Histidine kinase - - - 0.00000000000000000000002474 104.0
BYDH1_k127_5142167_34 - - - - 0.0000000000000000001624 93.0
BYDH1_k127_5142167_35 - - - - 0.00000000000000008124 85.0
BYDH1_k127_5142167_37 - - - - 0.00000000001467 69.0
BYDH1_k127_5142167_39 - - - - 0.000000002124 62.0
BYDH1_k127_5142167_4 peptidase M48, Ste24p - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003846 508.0
BYDH1_k127_5142167_40 - - - - 0.000000002977 69.0
BYDH1_k127_5142167_5 Cytochrome C oxidase, mono-heme subunit/FixO - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002788 428.0
BYDH1_k127_5142167_6 Sulfatase-modifying factor enzyme 1 K20333 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000853 424.0
BYDH1_k127_5142167_7 PLD-like domain K06131 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003082 388.0
BYDH1_k127_5142167_8 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003574 379.0
BYDH1_k127_5142167_9 Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides K03684 - 3.1.13.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005697 376.0
BYDH1_k127_5158738_0 Belongs to the peptidase S11 family K07258 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008213 419.0
BYDH1_k127_5158738_1 PFAM Aminotransferase, class IV K00824 - 2.6.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001281 347.0
BYDH1_k127_5158738_2 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 GO:0003674,GO:0003824,GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009106,GO:0009107,GO:0009108,GO:0009249,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010605,GO:0010629,GO:0016053,GO:0016415,GO:0016740,GO:0016746,GO:0016747,GO:0016772,GO:0016779,GO:0016874,GO:0016879,GO:0016979,GO:0018065,GO:0018130,GO:0018193,GO:0018205,GO:0019222,GO:0019538,GO:0019752,GO:0032787,GO:0033819,GO:0036211,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0048519,GO:0050789,GO:0051186,GO:0051188,GO:0051604,GO:0060255,GO:0065007,GO:0071704,GO:0072330,GO:0140096,GO:1901360,GO:1901362,GO:1901564,GO:1901576 2.3.1.181 0.00000000000000000000000000000000000000000000000000000000000000000000000000003816 271.0
BYDH1_k127_5158738_3 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.0000000000000000000000000000000000000000000000000000000000000000008285 235.0
BYDH1_k127_5158738_4 Belongs to the UPF0250 family K09158 - - 0.000000000000000000001394 96.0
BYDH1_k127_5160864_0 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 - - 1.624e-275 856.0
BYDH1_k127_5160864_1 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 - 3.3.1.1 2.476e-248 772.0
BYDH1_k127_5160864_10 Chain length determinant protein - - - 0.00000000000000000000118 106.0
BYDH1_k127_5160864_11 PFAM Aminotransferase, class I K00812 - 2.6.1.1 0.000000000000000000006889 93.0
BYDH1_k127_5160864_12 Competence protein ComEA K02237 GO:0005575,GO:0005623,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0044464 - 0.00000000000000011 82.0
BYDH1_k127_5160864_2 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 - 2.5.1.6 6.587e-204 639.0
BYDH1_k127_5160864_3 Belongs to the mannose-6-phosphate isomerase type 2 family K00971,K16011 - 2.7.7.13,5.3.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005835 578.0
BYDH1_k127_5160864_4 Methylenetetrahydrofolate reductase K00297 - 1.5.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008506 417.0
BYDH1_k127_5160864_5 Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane K19804 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001775 369.0
BYDH1_k127_5160864_6 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 - 4.1.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002635 291.0
BYDH1_k127_5160864_7 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 GO:0003674,GO:0003824,GO:0004127,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006573,GO:0006575,GO:0006725,GO:0006732,GO:0006753,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009117,GO:0009123,GO:0009165,GO:0009314,GO:0009628,GO:0009987,GO:0010165,GO:0010212,GO:0015939,GO:0015940,GO:0015949,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0034654,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046939,GO:0046940,GO:0050145,GO:0050896,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.4.25 0.0000000000000000000000000000000000000000000007025 168.0
BYDH1_k127_5160864_8 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K05788 - - 0.0000000000000000000000000000000000000000001498 161.0
BYDH1_k127_5160864_9 extracellular polysaccharide biosynthetic process K07011 - - 0.0000000000000000000000000008139 129.0
BYDH1_k127_517234_0 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003965 451.0
BYDH1_k127_517234_1 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) K00991 - 2.7.7.60 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006363 287.0
BYDH1_k127_517234_2 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0008150,GO:0008152,GO:0008270,GO:0008685,GO:0009058,GO:0009108,GO:0009987,GO:0016829,GO:0016849,GO:0030145,GO:0042180,GO:0042181,GO:0042802,GO:0043167,GO:0043169,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:1901576,GO:1901661,GO:1901663 4.6.1.12 0.0000000000000000000000000000000000000000000000000000000000000001937 226.0
BYDH1_k127_517234_3 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic K05589 - - 0.00000000000000000007201 95.0
BYDH1_k127_5184064_0 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001575 483.0
BYDH1_k127_5184064_1 response regulator K20977 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008778 477.0
BYDH1_k127_5184064_2 Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis K03411 - 3.5.1.44 0.000000000000000000000000000000000000000000000000000000000000000000000002462 250.0
BYDH1_k127_5184064_3 Anti-anti-sigma regulatory factor (Antagonist of anti-sigma factor) K20978 - - 0.0000000000000000000000000006677 115.0
BYDH1_k127_5184064_4 Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP K00575 - 2.1.1.80 0.0000000000000000006671 86.0
BYDH1_k127_5184064_5 Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.00008326 45.0
BYDH1_k127_5288190_0 Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties K00688 - 2.4.1.1 0.0 1234.0
BYDH1_k127_5288190_1 Ammonium transporter K03320,K06580 - - 3.372e-209 655.0
BYDH1_k127_5288190_2 nucleotide catabolic process - - - 0.00000000000000000000000000000000000000000000000000000002773 214.0
BYDH1_k127_5288190_3 Sel1-like repeats. K07126 - - 0.0000000000000000000000000000000000000007402 156.0
BYDH1_k127_5288190_4 Binds RpoD and negatively regulates RpoD-mediated transcription activation by preventing the interaction between the primary sigma factor RpoD with the catalytic core of the RNA polymerase and with promoter DNA. May be involved in replacement of the RNA polymerase sigma subunit from RpoD to RpoS during the transition from exponential growth to the stationary phase K07740 GO:0000988,GO:0000989,GO:0003674,GO:0008150,GO:0009889,GO:0010556,GO:0016989,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0140110,GO:1903506,GO:2001141 - 0.00000000000000000000003668 105.0
BYDH1_k127_5288190_5 Putative DNA-binding domain - - - 0.000000000000006343 76.0
BYDH1_k127_5394372_0 Thioredoxin-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005912 341.0
BYDH1_k127_5394372_1 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008291 336.0
BYDH1_k127_5394372_2 Belongs to the pseudouridine synthase RsuA family K06178 GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022613,GO:0031118,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 5.4.99.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001158 332.0
BYDH1_k127_5394372_3 diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001111 250.0
BYDH1_k127_5394372_4 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.000000000000000000000000000000000000000000000000000000000000000000005457 241.0
BYDH1_k127_5394372_5 TIGRFAM Tryptophanyl-tRNA synthetase K01867 - 6.1.1.2 0.00000000000000000000000000000000000000000000000000000000000000000002643 233.0
BYDH1_k127_5539608_0 Tripartite ATP-independent periplasmic transporter, DctM component K11690 - - 9.41e-213 667.0
BYDH1_k127_5539608_1 COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component K11688 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002387 477.0
BYDH1_k127_5539608_2 Tripartite ATP-independent periplasmic transporters, DctQ component K11689 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003855 271.0
BYDH1_k127_5539608_3 Mercury scavenger that specifically binds to one mercury ion and which passes it to the mercuric reductase (MerA) via the MerT protein K08364 - - 0.000000002355 63.0
BYDH1_k127_5539806_0 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 1.305e-265 835.0
BYDH1_k127_5539806_1 glycyl-tRNA synthetase, alpha subunit K01878 - 6.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004477 544.0
BYDH1_k127_5539806_10 COG0241 Histidinol phosphatase and related phosphatases K03273 - 3.1.3.82,3.1.3.83 0.0000000000000000000000000000000000000000000000000000000000000000001339 239.0
BYDH1_k127_5539806_11 PFAM Eukaryotic-type carbonic anhydrase K01674 - 4.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000002503 234.0
BYDH1_k127_5539806_12 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.000000000000000000000000000000000000000000000000006749 196.0
BYDH1_k127_5539806_13 COG0790 FOG TPR repeat, SEL1 subfamily - - - 0.00000000000000000000000000000000000000008389 167.0
BYDH1_k127_5539806_14 PFAM RNP-1 like RNA-binding protein - - - 0.00000000000000000000000000009454 117.0
BYDH1_k127_5539806_15 Anti-anti-sigma regulatory factor (Antagonist of anti-sigma factor) K20978 - - 0.000000000000000000003019 96.0
BYDH1_k127_5539806_16 Domain of unknown function (DUF3330) - - - 0.0000000000001196 72.0
BYDH1_k127_5539806_2 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 GO:0000166,GO:0001510,GO:0001882,GO:0001883,GO:0002097,GO:0002098,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005515,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006457,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009268,GO:0009451,GO:0009628,GO:0009636,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019003,GO:0030488,GO:0030955,GO:0031420,GO:0032259,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034470,GO:0034641,GO:0034660,GO:0035639,GO:0036094,GO:0042221,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0050896,GO:0061077,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901363 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000252 509.0
BYDH1_k127_5539806_3 response regulator K20977 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001125 492.0
BYDH1_k127_5539806_4 Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006637 498.0
BYDH1_k127_5539806_5 Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) K00097 GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006081,GO:0006725,GO:0006732,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0008614,GO:0008615,GO:0009058,GO:0009108,GO:0009110,GO:0009987,GO:0016491,GO:0016614,GO:0016616,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0034641,GO:0036094,GO:0042364,GO:0042802,GO:0042816,GO:0042819,GO:0042822,GO:0042823,GO:0043167,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046184,GO:0046483,GO:0046872,GO:0046914,GO:0048037,GO:0050570,GO:0050662,GO:0051186,GO:0051188,GO:0051287,GO:0055114,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:0097159,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 1.1.1.262 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006137 432.0
BYDH1_k127_5539806_6 Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation K03771 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005345 428.0
BYDH1_k127_5539806_7 glycosyl - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001876 364.0
BYDH1_k127_5539806_8 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003518 325.0
BYDH1_k127_5539806_9 PFAM Phospholipid glycerol acyltransferase K00655 - 2.3.1.51 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001281 309.0
BYDH1_k127_5557622_0 Beta-Casp domain K07576 - - 3.544e-200 633.0
BYDH1_k127_5557622_1 Bacterial protein of unknown function (DUF839) K07093 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005056 582.0
BYDH1_k127_5557622_2 COG0226 ABC-type phosphate transport system, periplasmic component K02040 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000317 450.0
BYDH1_k127_5557622_3 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007441 395.0
BYDH1_k127_5557622_4 oxidoreductase FAD NAD(P)-binding domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000001199 244.0
BYDH1_k127_5557622_5 phosphate transport system permease - - - 0.0000000000000000000000000000000000000000000000000000000000000000001755 235.0
BYDH1_k127_5557622_6 Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG) K01095 - 3.1.3.27 0.00000000000000000000000000000000000000000000000000000009917 199.0
BYDH1_k127_5557622_7 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.0000000000000000000000000000000004082 136.0
BYDH1_k127_5559333_0 AAA-type ATPase, and DNA-binding domains - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000023 368.0
BYDH1_k127_5559333_1 Peptidase family M48 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000008909 259.0
BYDH1_k127_5659244_0 Belongs to the heme-copper respiratory oxidase family K00404 - 1.9.3.1 3.25e-268 830.0
BYDH1_k127_5659244_1 COG1194 A G-specific DNA glycosylase K03575 GO:0003674,GO:0003824,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:1901360 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000165 413.0
BYDH1_k127_5659244_2 COG2993 Cbb3-type cytochrome oxidase, cytochrome c subunit K00405 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006864 347.0
BYDH1_k127_5659244_3 Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes - - - 0.0000000000000000000000000000000000000006756 149.0
BYDH1_k127_5659244_4 Phage integrase family - - - 0.0000000000000000000000001664 107.0
BYDH1_k127_5659244_5 - - - - 0.0000000000000000000009449 98.0
BYDH1_k127_5659244_6 - - - - 0.00000000008063 70.0
BYDH1_k127_5659244_7 C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex K00406 - - 0.0000000003988 61.0
BYDH1_k127_5659244_8 Cbb3-type cytochrome oxidase component FixQ - - - 0.000000002186 63.0
BYDH1_k127_5659244_9 - - - - 0.0000001354 54.0
BYDH1_k127_5680880_0 Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell K00982 - 2.7.7.42,2.7.7.89 1.097e-264 839.0
BYDH1_k127_5680880_1 PFAM Type II secretion system protein E K02670 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002696 528.0
BYDH1_k127_5680880_2 - K01992 - - 0.000000000000000000000000000000000000000000000000000000000000001292 227.0
BYDH1_k127_5680880_3 - - - - 0.0000000000000000000000000000000000009373 151.0
BYDH1_k127_5683912_0 Belongs to the FAD-dependent oxidoreductase 2 family. FRD SDH subfamily K00239 - 1.3.5.1,1.3.5.4 8.713e-274 852.0
BYDH1_k127_5683912_1 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 GO:0003674,GO:0003824,GO:0004812,GO:0004824,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006430,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.6 3.5e-256 796.0
BYDH1_k127_5683912_2 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001049 538.0
BYDH1_k127_5683912_3 Belongs to the GcvT family K06980 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002187 369.0
BYDH1_k127_5683912_4 PFAM Metal-dependent hydrolase HDOD - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000009357 254.0
BYDH1_k127_5683912_5 PFAM import inner membrane translocase subunit Tim44 - - - 0.000000000000000000000000000000000000000000000000002724 189.0
BYDH1_k127_5683912_6 acetyltransferase - - - 0.0000000000000000000000000000000000000000001019 169.0
BYDH1_k127_5683912_7 TIGRFAM Succinate dehydrogenase, cytochrome b556 subunit K00241 - - 0.00000000000000000000000008619 110.0
BYDH1_k127_5683912_8 succinate dehydrogenase activity K00242 GO:0000104,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009055,GO:0009060,GO:0009987,GO:0015980,GO:0016020,GO:0016043,GO:0016491,GO:0016627,GO:0016999,GO:0017004,GO:0017144,GO:0019752,GO:0020037,GO:0022607,GO:0022900,GO:0032991,GO:0034622,GO:0043436,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0045273,GO:0045274,GO:0045281,GO:0045282,GO:0045333,GO:0046906,GO:0048037,GO:0055114,GO:0065003,GO:0070469,GO:0070470,GO:0071704,GO:0071840,GO:0071944,GO:0072350,GO:0097159,GO:0098796,GO:0098797,GO:0098803,GO:1901363,GO:1902494,GO:1990204 - 0.0000000000000000004133 91.0
BYDH1_k127_588715_0 Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB K02454 - - 3.667e-214 679.0
BYDH1_k127_588715_1 4Fe-4S dicluster domain K11473 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001806 537.0
BYDH1_k127_588715_2 general secretion pathway protein D K02453 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004552 277.0
BYDH1_k127_588715_3 COG0277 FAD FMN-containing dehydrogenases K11472 GO:0003674,GO:0003824,GO:0006066,GO:0006082,GO:0008150,GO:0008152,GO:0009056,GO:0009441,GO:0009987,GO:0016054,GO:0016491,GO:0016614,GO:0017144,GO:0019154,GO:0019752,GO:0032787,GO:0034308,GO:0034310,GO:0042737,GO:0043436,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0046164,GO:0046296,GO:0046395,GO:0055114,GO:0071704,GO:0072329,GO:1901575,GO:1901615,GO:1901616 - 0.000000000000000000000000000000000000000000000000000000000000000000001056 241.0
BYDH1_k127_5921732_0 heat shock protein binding - - - 5.713e-233 752.0
BYDH1_k127_5921732_1 heat shock protein binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005632 528.0
BYDH1_k127_5921732_10 cytochrome complex assembly K02200 - - 0.0001942 53.0
BYDH1_k127_5921732_2 4Fe-4S binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000477 520.0
BYDH1_k127_5921732_3 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004821 503.0
BYDH1_k127_5921732_4 PFAM Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002357 478.0
BYDH1_k127_5921732_5 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.00000000000000000000000000000000000000000000000000000000000001128 218.0
BYDH1_k127_5921732_6 Ankyrin repeats (many copies) - - - 0.00000000000000000000000000000000000000000000004097 184.0
BYDH1_k127_5921732_7 COGs COG0790 FOG TPR repeat SEL1 subfamily K07126 - - 0.000000000000000000000000000000000000000000004542 184.0
BYDH1_k127_5921732_8 ferredoxin-NADP+ reductase activity - - - 0.0000000000000000000000000000000000000001119 165.0
BYDH1_k127_5921732_9 peptidase activity, acting on L-amino acid peptides K01337,K01400,K20276 - 3.4.21.50,3.4.24.28 0.00000221 59.0
BYDH1_k127_5978214_0 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611,K09065,K13252 - 2.1.3.3,2.1.3.6,2.1.3.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003654 453.0
BYDH1_k127_5978214_1 COG0604 NADPH quinone reductase and related Zn-dependent K00344 - 1.6.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002588 418.0
BYDH1_k127_5978214_2 COG2863 Cytochrome c553 - - - 0.00000000000000000000000000000000000000001112 161.0
BYDH1_k127_5978214_3 SH3 domain K07184 - - 0.0000000000000000000000000000000000001104 149.0
BYDH1_k127_5978214_4 COG4992 Ornithine acetylornithine aminotransferase K00821 - 2.6.1.11,2.6.1.17 0.000000000000000000000000827 105.0
BYDH1_k127_5997124_0 Catalyzes cross-linking of the peptidoglycan cell wall at the division septum K03587 - 3.4.16.4 1.395e-206 657.0
BYDH1_k127_5997124_1 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 GO:0000270,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008765,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0030203,GO:0034645,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 6.3.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007495 451.0
BYDH1_k127_5997124_2 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070475,GO:0071424,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.199 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001884 383.0
BYDH1_k127_5997124_3 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001338 286.0
BYDH1_k127_5997124_4 MraZ protein, putative antitoxin-like K03925 - - 0.000000000000000000000000000000000000000001806 161.0
BYDH1_k127_5997124_5 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic K03586 - - 0.0000000000000000138 87.0
BYDH1_k127_6005117_0 MazG nucleotide pyrophosphohydrolase domain K04765 - 3.6.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001432 304.0
BYDH1_k127_6005117_1 signal transduction protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001907 250.0
BYDH1_k127_6005117_2 HDOD domain - - - 0.00000000000000000000000000000000000000000000000000000000000258 220.0
BYDH1_k127_6005117_3 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0008728,GO:0008893,GO:0009116,GO:0009117,GO:0009119,GO:0009150,GO:0009259,GO:0009605,GO:0009987,GO:0009991,GO:0015949,GO:0015969,GO:0016020,GO:0016740,GO:0016772,GO:0016778,GO:0016787,GO:0016788,GO:0016794,GO:0019637,GO:0019693,GO:0030312,GO:0031667,GO:0033865,GO:0033875,GO:0034032,GO:0034035,GO:0034641,GO:0042278,GO:0042578,GO:0042594,GO:0044237,GO:0044238,GO:0044281,GO:0044464,GO:0046128,GO:0046483,GO:0050896,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:1901068,GO:1901135,GO:1901360,GO:1901564,GO:1901657 2.7.6.5 0.000000000000000000000000000000000000000000114 164.0
BYDH1_k127_6005117_4 ABC transporter, ATP-binding protein K02003 - - 0.000000000000000000000000000000000004627 142.0
BYDH1_k127_6005117_5 Barrel-sandwich domain of CusB or HlyD membrane-fusion - - - 0.00000000000000000009755 105.0
BYDH1_k127_6005117_6 Forkhead associated domain - - - 0.00000000000000112 80.0
BYDH1_k127_6005117_7 Transcriptional regulatory protein, C terminal - - - 0.0000003209 64.0
BYDH1_k127_6005117_8 Outer membrane protein beta-barrel domain - - - 0.0000005681 59.0
BYDH1_k127_6058322_0 Type II secretion system (T2SS), protein E, N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000142 554.0
BYDH1_k127_6058322_1 nuclear chromosome segregation K01153,K13924,K15492 - 2.1.1.80,3.1.1.61,3.1.21.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006891 358.0
BYDH1_k127_6058322_2 NAD(P)H-binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001761 278.0
BYDH1_k127_6058322_3 PIN domain - - - 0.000000000000000000000000000000000000000000000000000000001719 202.0
BYDH1_k127_6058322_4 COG1651 Protein-disulfide isomerase - - - 0.000000000000000000000000000000000000000000000000000000006013 208.0
BYDH1_k127_6058322_5 Belongs to the DsbB family K03611 - - 0.0000000000000000000000000000000000000000000002035 174.0
BYDH1_k127_6058322_6 Arc-like DNA binding domain - - - 0.0000000000000000000000000000000000008292 141.0
BYDH1_k127_6058322_7 SCO1/SenC K07152 - - 0.0000000000000000000000000007078 123.0
BYDH1_k127_6058322_8 tRNA-splicing ligase RtcB K14415 - 6.5.1.3 0.00000000000005362 72.0
BYDH1_k127_6191558_0 Vitamin B12 dependent methionine synthase, activation K00548 - 2.1.1.13 0.0 1801.0
BYDH1_k127_6191558_1 GTP-binding protein TypA K06207 - - 2.139e-301 935.0
BYDH1_k127_6191558_10 DsrE/DsrF-like family K09004 - - 0.00000000000000000000000000001601 123.0
BYDH1_k127_6191558_11 - - - - 0.00000000000000000000000002174 116.0
BYDH1_k127_6191558_12 PFAM TrkA-N domain K03499 - - 0.0000000000000000002872 87.0
BYDH1_k127_6191558_2 Site-specific recombinase - - - 9.684e-271 849.0
BYDH1_k127_6191558_3 Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA K03498 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009613 574.0
BYDH1_k127_6191558_4 Belongs to the peptidase S33 family K01259 - 3.4.11.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002239 503.0
BYDH1_k127_6191558_5 Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP K01525 - 3.6.1.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001278 344.0
BYDH1_k127_6191558_6 Kdo2-lipid A biosynthetic process K02517 - 2.3.1.241 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001949 287.0
BYDH1_k127_6191558_7 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 - - 0.000000000000000000000000000000000000000000000000000000000002209 213.0
BYDH1_k127_6191558_8 Rhodanese Homology Domain - - - 0.00000000000000000000000000000000000000000000000000000000000807 218.0
BYDH1_k127_6191558_9 Sel1 domain protein repeat-containing protein K07126 - - 0.0000000000000000000000000000000000009565 150.0
BYDH1_k127_6221686_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1427.0
BYDH1_k127_6221686_1 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001543 437.0
BYDH1_k127_6221686_2 Redoxin K03564 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000000000000008816 231.0
BYDH1_k127_6221686_3 Uncharacterized protein family, UPF0114 - - - 0.000000000000000000000000000000000000000000000000000000000000000002583 232.0
BYDH1_k127_6221686_4 PFAM Amino acid-binding ACT K03567 - - 0.00000000000000000000000000000000000000000000000000000000000000001727 228.0
BYDH1_k127_6221686_5 - - - - 0.000000000000000000000006889 108.0
BYDH1_k127_6221686_6 Alpha beta hydrolase - - - 0.0000003761 55.0
BYDH1_k127_6257744_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 1.288e-237 739.0
BYDH1_k127_6257744_1 Protein of unknown function (DUF2442) - - - 0.00000000000000000000000000000000292 130.0
BYDH1_k127_6257744_2 Domain of unknown function (DUF4160) - - - 0.000000000000000000000000000000004274 129.0
BYDH1_k127_6257744_3 - - - - 0.000000000000000000000005982 111.0
BYDH1_k127_6279647_0 Glutamate synthase K00265 - 1.4.1.13,1.4.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006499 571.0
BYDH1_k127_6279647_1 dGTPase preferentially hydrolyzes dGTP over the other canonical NTPs K01129 GO:0003674,GO:0003824,GO:0006139,GO:0006163,GO:0006195,GO:0006203,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008832,GO:0009056,GO:0009058,GO:0009117,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009151,GO:0009155,GO:0009166,GO:0009200,GO:0009204,GO:0009215,GO:0009217,GO:0009262,GO:0009264,GO:0009394,GO:0009987,GO:0015949,GO:0016787,GO:0016788,GO:0016793,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042578,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046070,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576 3.1.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008525 518.0
BYDH1_k127_6279647_2 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735 - 4.2.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007143 470.0
BYDH1_k127_6279647_3 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 GO:0000287,GO:0003674,GO:0003824,GO:0004765,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009423,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019438,GO:0019632,GO:0019752,GO:0032787,GO:0043167,GO:0043169,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0046872,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615 2.7.1.71 0.000000000000000000000000000000000000000000000000000003206 195.0
BYDH1_k127_6279647_4 Type II secretory pathway, component HofQ K02666 - - 0.000000000000000000000000001487 113.0
BYDH1_k127_6279647_5 AAA domain K03112 - - 0.00000000000000000001164 107.0
BYDH1_k127_6279647_6 - - - - 0.000000000000004721 77.0
BYDH1_k127_6297032_0 PAS fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001533 478.0
BYDH1_k127_6297032_1 Metallophosphoesterase K07098 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001243 440.0
BYDH1_k127_6297032_2 Belongs to the NAD(P)-dependent epimerase dehydratase family K01784,K12448 - 5.1.3.2,5.1.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000471 361.0
BYDH1_k127_6297032_3 Peptidase_C39 like family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000009843 267.0
BYDH1_k127_6297032_4 COG0575 CDP-diglyceride synthetase - - - 0.000000000000000000000000000000000001886 141.0
BYDH1_k127_6297032_5 - - - - 0.00000000000000000001342 97.0
BYDH1_k127_633806_0 TIGRFAM Flagellar hook-associated protein, FlgK K02396 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001963 533.0
BYDH1_k127_633806_1 Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation K02394 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001448 473.0
BYDH1_k127_633806_10 Flagellar protein FliT K02423 - - 0.000000003258 63.0
BYDH1_k127_633806_2 Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end K02407 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003165 428.0
BYDH1_k127_633806_3 Belongs to the bacterial flagellin family K02397 - - 0.00000000000000000000000000000000000000000000000000000000000003219 226.0
BYDH1_k127_633806_4 Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella K02406 GO:0005575,GO:0005576,GO:0005623,GO:0009288,GO:0042995,GO:0043226,GO:0043228,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000484 195.0
BYDH1_k127_633806_5 Flagellar protein FliS K02422 - - 0.000000000000000000000000000000000008333 139.0
BYDH1_k127_633806_6 Flagellar rod assembly protein muramidase FlgJ K02395 - - 0.00000000000000000000005125 102.0
BYDH1_k127_633806_7 COG0457 FOG TPR repeat - - - 0.000000000000005421 75.0
BYDH1_k127_633806_8 Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation K02393 - - 0.0000000000004024 69.0
BYDH1_k127_633806_9 FlaG protein K06603 - - 0.0000000003037 66.0
BYDH1_k127_6381784_0 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) K08307 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0008150,GO:0008932,GO:0008933,GO:0009893,GO:0016020,GO:0016740,GO:0016757,GO:0019222,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043085,GO:0044093,GO:0044464,GO:0048518,GO:0050789,GO:0050790,GO:0051341,GO:0051353,GO:0061783,GO:0065007,GO:0065009 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005656 478.0
BYDH1_k127_6466538_0 PFAM peptidase M1, membrane alanine aminopeptidase K01256 - 3.4.11.2 0.0 1147.0
BYDH1_k127_6466538_1 PRMT5 oligomerisation domain K11434 - 2.1.1.319 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001412 280.0
BYDH1_k127_6483844_0 response regulator receiver - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003741 472.0
BYDH1_k127_6483844_1 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003293 409.0
BYDH1_k127_6483844_2 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006033 362.0
BYDH1_k127_6483844_3 PilZ domain K03406 - - 0.000000000000000000000000000000000000000000000000000000000009402 216.0
BYDH1_k127_6483844_4 Histidine kinase K03320,K03406,K03407,K07315 - 2.7.13.3,3.1.3.3 0.0000000000000000000000000000000000000001188 174.0
BYDH1_k127_6491763_0 Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate K01952 GO:0000166,GO:0003674,GO:0003824,GO:0004642,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006520,GO:0006541,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009064,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016874,GO:0016879,GO:0016884,GO:0016887,GO:0017076,GO:0017111,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605 6.3.5.3 5.077e-262 820.0
BYDH1_k127_6491763_1 chemotaxis K03406 - - 0.000000000000000000000000000000000007625 139.0
BYDH1_k127_6565636_0 Phosphoglucomutase/phosphomannomutase, C-terminal domain K01835 - 5.4.2.2 1.242e-253 791.0
BYDH1_k127_6565636_1 Cyclic nucleotide-monophosphate binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008088 310.0
BYDH1_k127_6565636_2 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007 - 2.7.9.2 0.00000000000000000001628 92.0
BYDH1_k127_6565636_3 TfoX N-terminal domain K07343 - - 0.0000000000000002073 80.0
BYDH1_k127_6607094_0 Asparagine synthase K01953 - 6.3.5.4 1.047e-226 711.0
BYDH1_k127_6607094_1 FemAB family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003591 486.0
BYDH1_k127_6607094_2 Glycosyl transferases group 1 K00786 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001034 466.0
BYDH1_k127_6607094_3 PFAM Glycosyl transferase, group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007008 411.0
BYDH1_k127_6607094_4 eight transmembrane protein EpsH - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002298 332.0
BYDH1_k127_6607094_5 Domain of unknown function (DUF3473) - - - 0.000000000000000000000000000000000000000000000000000000000000000001324 230.0
BYDH1_k127_6638983_0 Cytochrome c-type biogenesis protein CcmF K02198 - - 7.094e-284 885.0
BYDH1_k127_6638983_1 COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II K01897 - 6.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002267 564.0
BYDH1_k127_6638983_10 Doubled CXXCH motif (Paired_CXXCH_1) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005081 304.0
BYDH1_k127_6638983_11 Tetratricopeptide repeat K02200 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002078 304.0
BYDH1_k127_6638983_12 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02194 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003918 284.0
BYDH1_k127_6638983_13 oxidoreductase DsbE K02199 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002009 253.0
BYDH1_k127_6638983_14 once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system K02193 - 3.6.3.41 0.000000000000000000000000000000000000000000000000000000000000000000002201 241.0
BYDH1_k127_6638983_15 Cytochrome C oxidase, cbb3-type, subunit III K00406 - - 0.00000000000000000000000000000000000000000000000000000000001103 218.0
BYDH1_k127_6638983_16 Iron--sulfur cluster insertion protein erpA K15724 - - 0.0000000000000000000000000000000000000000000000000000002243 195.0
BYDH1_k127_6638983_17 Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH K02197 - - 0.000000000000000000000000000000000000000000000000455 179.0
BYDH1_k127_6638983_18 subunit of a heme lyase K02200 - - 0.000000000000000000000000000000000000002228 152.0
BYDH1_k127_6638983_19 Integral membrane protein CcmA involved in cell shape determination - - - 0.00000000000000000000000000000000000003511 147.0
BYDH1_k127_6638983_2 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 - 6.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002149 548.0
BYDH1_k127_6638983_20 - - - - 0.00000000000000000000000001583 119.0
BYDH1_k127_6638983_21 Doubled CXXCH motif (Paired_CXXCH_1) - - - 0.00000000000000000000001137 110.0
BYDH1_k127_6638983_22 - - - - 0.0000000000000000000004046 95.0
BYDH1_k127_6638983_23 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000000000000148 83.0
BYDH1_k127_6638983_24 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02196 - - 0.000000000001493 70.0
BYDH1_k127_6638983_26 neural crest formation K10450 GO:0000151,GO:0001837,GO:0002009,GO:0003002,GO:0003401,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005798,GO:0005815,GO:0005829,GO:0005856,GO:0006464,GO:0006513,GO:0006807,GO:0006810,GO:0006888,GO:0006900,GO:0006901,GO:0006903,GO:0006996,GO:0007154,GO:0007165,GO:0007166,GO:0007267,GO:0007275,GO:0007389,GO:0008150,GO:0008152,GO:0009653,GO:0009790,GO:0009792,GO:0009888,GO:0009952,GO:0009966,GO:0009968,GO:0009987,GO:0010646,GO:0010648,GO:0012505,GO:0012506,GO:0012507,GO:0014029,GO:0014031,GO:0014032,GO:0014033,GO:0015630,GO:0016020,GO:0016043,GO:0016050,GO:0016055,GO:0016192,GO:0016567,GO:0019538,GO:0022607,GO:0023051,GO:0023052,GO:0023057,GO:0030111,GO:0030117,GO:0030120,GO:0030127,GO:0030133,GO:0030134,GO:0030135,GO:0030154,GO:0030178,GO:0030658,GO:0030659,GO:0030660,GO:0030662,GO:0031090,GO:0031410,GO:0031461,GO:0031463,GO:0031982,GO:0032446,GO:0032501,GO:0032502,GO:0032991,GO:0036211,GO:0040007,GO:0042802,GO:0043009,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043412,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044430,GO:0044433,GO:0044444,GO:0044446,GO:0044464,GO:0046907,GO:0048193,GO:0048194,GO:0048199,GO:0048207,GO:0048208,GO:0048468,GO:0048475,GO:0048513,GO:0048519,GO:0048523,GO:0048583,GO:0048585,GO:0048589,GO:0048646,GO:0048729,GO:0048731,GO:0048762,GO:0048856,GO:0048863,GO:0048864,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051179,GO:0051234,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0051716,GO:0060026,GO:0060028,GO:0060429,GO:0060485,GO:0060560,GO:0060828,GO:0061024,GO:0065003,GO:0065007,GO:0070647,GO:0071704,GO:0071840,GO:0090090,GO:0090114,GO:0097708,GO:0098588,GO:0098796,GO:0098805,GO:0198738,GO:1901564,GO:1902494,GO:1905114,GO:1990234 - 0.0000000009656 71.0
BYDH1_k127_6638983_3 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001751 500.0
BYDH1_k127_6638983_4 Two component regulator propeller - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003486 481.0
BYDH1_k127_6638983_5 PFAM Two component regulator propeller - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009022 471.0
BYDH1_k127_6638983_6 PFAM peptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001519 389.0
BYDH1_k127_6638983_7 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02195 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005681 362.0
BYDH1_k127_6638983_8 NHL repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002226 350.0
BYDH1_k127_6638983_9 Cytochrome C oxidase, cbb3-type, subunit III K00406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002486 331.0
BYDH1_k127_6653111_0 tRNA-splicing ligase RtcB K14415 - 6.5.1.3 1.716e-219 688.0
BYDH1_k127_6653111_1 acid phosphatase activity K01179,K21449 - 3.2.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001347 344.0
BYDH1_k127_6653111_2 Protein of unknown function, DUF255 - - - 0.0000000000000000000000000000000000000000000000000000000000000008029 224.0
BYDH1_k127_6653111_3 Archease protein family (MTH1598/TM1083) - - - 0.0000000000000000000000000000000000000000000000016 179.0
BYDH1_k127_6653111_4 Dual specificity phosphatase, catalytic domain - - - 0.00000000000000000000000000000000000000000006254 165.0
BYDH1_k127_6681441_0 Phosphomethylpyrimidine kinase K00941 - 2.7.1.49,2.7.4.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008902 370.0
BYDH1_k127_6681441_1 Uncharacterised protein family (UPF0093) K08973 - - 0.00000000000000000000000000000000000000000000000000000000009073 209.0
BYDH1_k127_6681441_2 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 - 2.5.1.3 0.000000000000000000000000000000000000000000000000000000002112 208.0
BYDH1_k127_6681441_3 Domain of unknown function (DUF4398) - - - 0.000000000000000000000000002862 117.0
BYDH1_k127_6681441_4 PFAM Aminotransferase class-III K01845 - 5.4.3.8 0.000000006951 56.0
BYDH1_k127_6749667_0 Belongs to the CarB family K01955 - 6.3.5.5 0.0 1630.0
BYDH1_k127_6749667_1 Extracellular solute-binding protein - - - 0.0 1024.0
BYDH1_k127_6749667_10 Carboxypeptidase regulatory-like domain K01365,K02030,K14475 - 3.4.22.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001916 328.0
BYDH1_k127_6749667_11 Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit K02427 - 2.1.1.166 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000008938 285.0
BYDH1_k127_6749667_12 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007806 273.0
BYDH1_k127_6749667_13 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001836 244.0
BYDH1_k127_6749667_14 Multicopper oxidase - - - 0.000000000000000000000000000000000005195 149.0
BYDH1_k127_6749667_15 Multicopper oxidase - - - 0.0000000000000000000000000000001683 145.0
BYDH1_k127_6749667_16 Domain of unknown function (DUF4149) - - - 0.000000000000000000000000002261 117.0
BYDH1_k127_6749667_17 CRS1_YhbY K07574 GO:0000027,GO:0000028,GO:0000966,GO:0000967,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016072,GO:0022607,GO:0022613,GO:0022618,GO:0034470,GO:0034471,GO:0034622,GO:0034641,GO:0034660,GO:0042254,GO:0042255,GO:0042273,GO:0042274,GO:0043021,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0046483,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:1901360,GO:1990275 - 0.0000000000000000000000403 104.0
BYDH1_k127_6749667_18 cheY-homologous receiver domain - - - 0.00000000000000001779 96.0
BYDH1_k127_6749667_19 Protein of unknown function (DUF2914) - - - 0.000000000000421 78.0
BYDH1_k127_6749667_2 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 6.4e-323 998.0
BYDH1_k127_6749667_21 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.0000002514 55.0
BYDH1_k127_6749667_22 SdrD B-like domain - - - 0.00007507 57.0
BYDH1_k127_6749667_3 Belongs to the ABC transporter superfamily K02031,K02032 - - 4.219e-273 855.0
BYDH1_k127_6749667_4 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000226 615.0
BYDH1_k127_6749667_5 PFAM binding-protein-dependent transport systems inner membrane component K02034 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003163 593.0
BYDH1_k127_6749667_6 Carbamoyl-phosphate synthetase glutamine chain K01956 GO:0000050,GO:0003674,GO:0003824,GO:0004088,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005951,GO:0006082,GO:0006139,GO:0006206,GO:0006207,GO:0006220,GO:0006221,GO:0006520,GO:0006525,GO:0006526,GO:0006541,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019627,GO:0019637,GO:0019693,GO:0019752,GO:0019856,GO:0032991,GO:0034641,GO:0034654,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046112,GO:0046390,GO:0046394,GO:0046483,GO:0055086,GO:0071704,GO:0071941,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494 6.3.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007248 559.0
BYDH1_k127_6749667_7 Oligopeptide transport system permease protein OppB K02033 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001839 513.0
BYDH1_k127_6749667_8 DEAD-box RNA helicase involved in RNA degradation. Has RNA-dependent ATPase activity and unwinds double-stranded RNA K03732 - 3.6.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009542 525.0
BYDH1_k127_6749667_9 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 - 2.5.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001238 327.0
BYDH1_k127_6777877_0 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008397 355.0
BYDH1_k127_6777877_1 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006724 316.0
BYDH1_k127_6777877_2 Radical SAM superfamily K04069 - 1.97.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000005497 269.0
BYDH1_k127_6777877_3 Ig-like domain from next to BRCA1 gene - - - 0.0000000000000000000000000000000000000000000004872 182.0
BYDH1_k127_6777877_4 PBP superfamily domain K02040 - - 0.00000000000000000000000000000006508 130.0
BYDH1_k127_6777877_5 rhs family - - - 0.0000000005519 71.0
BYDH1_k127_6782556_0 Belongs to the anaerobic coproporphyrinogen-III oxidase family - - - 6.927e-211 668.0
BYDH1_k127_6782556_1 Chase2 domain K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009454 440.0
BYDH1_k127_6782556_2 TIGRFAM ATP-binding cassette protein, ChvD family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007049 379.0
BYDH1_k127_6782556_3 Specifically methylates the 50S ribosomal protein L3 on a specific glutamine residue K07320 - 2.1.1.298 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002297 380.0
BYDH1_k127_6782556_4 long-chain fatty acid transport protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005407 314.0
BYDH1_k127_6782556_5 Peptidase m48 ste24p - - - 0.00000000000000000000000000000000000000000000000000000007635 205.0
BYDH1_k127_6782556_6 nuclease - - - 0.0000000000000000003565 94.0
BYDH1_k127_6782556_7 Bacterial SH3 domain - - - 0.0000000000001665 77.0
BYDH1_k127_678537_0 DEAD DEAH box helicase K03724 - - 0.0 1723.0
BYDH1_k127_678537_1 PFAM ROK family protein K00845,K00847 - 2.7.1.2,2.7.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002274 445.0
BYDH1_k127_678537_10 cell adhesion involved in biofilm formation K01186 - 3.2.1.18 0.0000626 57.0
BYDH1_k127_678537_11 hydrolase family 81 - - - 0.0002484 55.0
BYDH1_k127_678537_2 UbiA prenyltransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004439 435.0
BYDH1_k127_678537_3 COG0491 Zn-dependent hydrolases, including glyoxylases K01069 - 3.1.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004416 316.0
BYDH1_k127_678537_4 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007617 289.0
BYDH1_k127_678537_5 Histidine Phosphotransfer domain - - - 0.0000000000000000000000000000000000000000000000000000000000007508 224.0
BYDH1_k127_678537_6 involved in chromosome partitioning K03496 - - 0.000000000000000000000000000000000000000000000004529 181.0
BYDH1_k127_678537_7 - - - - 0.00000000000000000000000001916 108.0
BYDH1_k127_678537_8 - - - - 0.0000000000000000001464 97.0
BYDH1_k127_678537_9 Tfp pilus assembly protein FimV - - - 0.00001197 59.0
BYDH1_k127_6839796_0 PFAM glycosyl transferase family 35 K00688 - 2.4.1.1 0.0 1095.0
BYDH1_k127_6839796_1 GAF domain - - - 6.293e-204 649.0
BYDH1_k127_6839796_10 Domain of unknown function (DUF4154) - - - 0.00000000000004919 81.0
BYDH1_k127_6839796_11 - - - - 0.0000000001685 68.0
BYDH1_k127_6839796_2 HD domain K07814 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000125 475.0
BYDH1_k127_6839796_3 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004219 468.0
BYDH1_k127_6839796_4 Outer membrane protein beta-barrel family K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000218 435.0
BYDH1_k127_6839796_5 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007 - 2.7.9.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003587 280.0
BYDH1_k127_6839796_6 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate K03271 - 5.3.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000002899 245.0
BYDH1_k127_6839796_7 PFAM glycoside hydrolase, family 77 K00705 - 2.4.1.25 0.00000000000000000000000000000000000000000000000000000000000001499 216.0
BYDH1_k127_6839796_8 Response regulator receiver - - - 0.000000000000000000000000000000000000000000000000000992 186.0
BYDH1_k127_6839796_9 cheY-homologous receiver domain - - - 0.00000000000000000000000000000000000000000001048 172.0
BYDH1_k127_686923_0 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase - - - 1.491e-284 887.0
BYDH1_k127_686923_1 4Fe-4S dicluster domain - - - 2.635e-269 834.0
BYDH1_k127_686923_10 - - - - 0.00000000000000000000000000000000003141 139.0
BYDH1_k127_686923_11 Belongs to the HesB IscA family K13628 - - 0.00000000000000000000008456 101.0
BYDH1_k127_686923_12 Belongs to the MsrB Met sulfoxide reductase family K07305 - 1.8.4.12 0.000000000000000000001298 94.0
BYDH1_k127_686923_2 Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source K02224 - 6.3.5.11,6.3.5.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005192 586.0
BYDH1_k127_686923_3 PFAM Polysulphide reductase, NrfD K00185 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004525 527.0
BYDH1_k127_686923_4 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein K00184 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001792 339.0
BYDH1_k127_686923_5 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005309 356.0
BYDH1_k127_686923_6 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001539 349.0
BYDH1_k127_686923_7 Histidine kinase K07673 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003347 338.0
BYDH1_k127_686923_8 response regulator receiver K07684 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003544 271.0
BYDH1_k127_686923_9 Nitrate reductase gamma subunit - - - 0.000000000000000000000000000000000000000000000000000000000003412 210.0
BYDH1_k127_6880592_0 Belongs to the IlvD Edd family K01687 GO:0003674,GO:0003824,GO:0004160,GO:0016829,GO:0016835,GO:0016836 4.2.1.9 1.328e-278 865.0
BYDH1_k127_6880592_1 FecR protein - - - 6.004e-203 672.0
BYDH1_k127_6880592_2 TonB dependent receptor K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001506 559.0
BYDH1_k127_6880592_3 Histidine Phosphotransfer domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000378 567.0
BYDH1_k127_6880592_4 Transcriptional regulatory protein, C terminal K02483 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003315 332.0
BYDH1_k127_6880592_5 ABC transporter substrate binding protein K01989 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005422 257.0
BYDH1_k127_6880592_6 Domain of Unknown Function (DUF349) - - - 0.0000000000000000000000000000000005555 138.0
BYDH1_k127_6880592_7 Histidine kinase - - - 0.0002412 49.0
BYDH1_k127_6899889_0 FG-GAP repeat protein - - - 0.000000000000000000000000000000000000000000000000000006329 218.0
BYDH1_k127_6899889_1 Mannose-6-phosphate isomerase - - - 0.000000000000000000000000000000000000000000000000007174 184.0
BYDH1_k127_6899889_2 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009314,GO:0009380,GO:0009381,GO:0009628,GO:0009987,GO:0016462,GO:0016787,GO:0016788,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032991,GO:0033554,GO:0034641,GO:0042802,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0097159,GO:0140097,GO:1901360,GO:1901363,GO:1902494,GO:1905347,GO:1905348,GO:1990391 - 0.00000000000000000000000000000000006494 134.0
BYDH1_k127_6899889_3 Phage derived protein Gp49-like (DUF891) - - - 0.000000000000000000000000000000001251 132.0
BYDH1_k127_6899889_4 Transcriptional regulator - - - 0.000000000000000000000000000002229 125.0
BYDH1_k127_6899889_5 PFAM Cupin 2, conserved barrel - - - 0.00000000000000007963 83.0
BYDH1_k127_6904877_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K21307 - 1.8.5.6 0.0 1688.0
BYDH1_k127_6904877_1 heat shock protein binding - - - 4.873e-278 882.0
BYDH1_k127_6904877_2 4Fe-4S binding domain K21308 - - 0.0000000000000000000000000000000000002148 140.0
BYDH1_k127_698907_0 heat shock protein binding - - - 1.695e-256 820.0
BYDH1_k127_698907_1 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01531,K12955 - 3.6.3.2 7.805e-223 707.0
BYDH1_k127_698907_2 Polysaccharide biosynthesis protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001869 371.0
BYDH1_k127_698907_3 peptidase activity, acting on L-amino acid peptides K01337,K01400,K20276 - 3.4.21.50,3.4.24.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000009713 306.0
BYDH1_k127_698907_4 Histidine kinase-, DNA gyrase B-, and HSP90-like - - - 0.0000000000000000000000000000003597 133.0
BYDH1_k127_698907_5 amine dehydrogenase activity K01406,K01448,K13735,K20276,K21449 - 3.4.24.40,3.5.1.28 0.0000000001035 76.0
BYDH1_k127_7107171_0 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 2.279e-240 751.0
BYDH1_k127_7107171_1 Cytochrome b(N-terminal)/b6/petB K00412 - - 3.494e-203 638.0
BYDH1_k127_7107171_2 Catalyzes the formation of L-homocysteine from O- succinyl-L-homoserine (OSHS) and hydrogen sulfide K10764 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008993 604.0
BYDH1_k127_7107171_3 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal K00411 - 1.10.2.2 0.00000000000000000000000000000000000000000000000000000000000000000007756 234.0
BYDH1_k127_7107171_4 Sulfatase - - - 0.00000000000000000000000000000000000000000000000000000000000000404 237.0
BYDH1_k127_7107171_5 Colicin v production K03558 GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0008152,GO:0009058,GO:0009403,GO:0009404,GO:0009987,GO:0016020,GO:0019748,GO:0044237,GO:0044249,GO:0044464,GO:0044550,GO:0071944 - 0.000000000000000000000000000000000000001806 152.0
BYDH1_k127_7107171_6 Cytochrome C1 family K00413 - - 0.00000000000000000000000000108 119.0
BYDH1_k127_7107171_7 Protein conserved in bacteria K03749 - - 0.00000000000006026 75.0
BYDH1_k127_7129696_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008586 615.0
BYDH1_k127_7129696_1 AAA ATPase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001212 511.0
BYDH1_k127_7235680_0 Spermine/spermidine synthase domain K00797 - 2.5.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006112 625.0
BYDH1_k127_7235680_1 diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001494 481.0
BYDH1_k127_7235680_2 Thioredoxin - - - 0.000000000000000000000000000000000000000000001505 167.0
BYDH1_k127_7235680_3 - - - - 0.000000000000000000000001663 106.0
BYDH1_k127_7235680_4 Flagellar FliJ protein - - - 0.0000000000000000000002658 102.0
BYDH1_k127_72795_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 0.0 1037.0
BYDH1_k127_72795_1 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002619 482.0
BYDH1_k127_72795_2 Belongs to the dCTP deaminase family K01494 - 3.5.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002021 359.0
BYDH1_k127_72795_3 Part of a membrane complex involved in electron transport K03616 - - 0.00000000000000000000000000000000000000000000000000000000000002924 227.0
BYDH1_k127_72795_4 Protein of unknown function (DUF3108) - - - 0.000000000000000000000000000000000000000004982 164.0
BYDH1_k127_72795_5 Tetratricopeptide repeat - - - 0.00000000000000000000009679 106.0
BYDH1_k127_72795_6 Type II transport protein GspH - - - 0.00001248 50.0
BYDH1_k127_7357159_0 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 1.788e-252 784.0
BYDH1_k127_7357159_1 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004073,GO:0006082,GO:0006520,GO:0006549,GO:0006553,GO:0006555,GO:0006566,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009081,GO:0009082,GO:0009085,GO:0009086,GO:0009088,GO:0009089,GO:0009097,GO:0009987,GO:0016053,GO:0016491,GO:0016620,GO:0016903,GO:0019752,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046451,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.2.1.11 9.662e-197 617.0
BYDH1_k127_7357159_2 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 GO:0003674,GO:0003824,GO:0003862,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006551,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009098,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.85 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006155 528.0
BYDH1_k127_7357159_3 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002706 355.0
BYDH1_k127_7357159_4 COG3170 Tfp pilus assembly protein FimV K08086 - - 0.00000000000000000000000000000001987 134.0
BYDH1_k127_7357159_5 Protein of unknown function (DUF2288) - - - 0.000005825 50.0
BYDH1_k127_7479899_0 Polysaccharide biosynthesis protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001235 563.0
BYDH1_k127_7479899_1 Oxidative deamination of D-amino acids K00285 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006082,GO:0006520,GO:0006522,GO:0006524,GO:0006807,GO:0008150,GO:0008152,GO:0008718,GO:0009056,GO:0009063,GO:0009078,GO:0009080,GO:0009987,GO:0016020,GO:0016054,GO:0016491,GO:0016638,GO:0019478,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044464,GO:0046144,GO:0046395,GO:0046416,GO:0046436,GO:0055114,GO:0055130,GO:0071704,GO:0071944,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 1.4.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001948 481.0
BYDH1_k127_7479899_2 Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily K01834 - 5.4.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002008 322.0
BYDH1_k127_7479899_4 Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA K03215 - 2.1.1.190 0.0000000008662 59.0
BYDH1_k127_7495205_0 Allophanate hydrolase K01457 - 3.5.1.54 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001011 533.0
BYDH1_k127_7495205_1 Catalyzes the reversible phosphorylation of S-methyl-5'- thioinosine (MTI) to hypoxanthine and 5-methylthioribose-1- phosphate. Involved in the breakdown of S-methyl-5'-thioadenosine (MTA), a major by-product of polyamine biosynthesis. Catabolism of (MTA) occurs via deamination to MTI and phosphorolysis to hypoxanthine K00772,K19696 - 2.4.2.28,2.4.2.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000878 374.0
BYDH1_k127_7495205_2 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.0000000000000000000000000000000000000000000000000000000000000000000000005065 249.0
BYDH1_k127_7495205_3 phosphoribosyltransferase K00760 - 2.4.2.8 0.000000000000000000000000000000000000000000000000000000000000002727 226.0
BYDH1_k127_7495205_4 DsrE/DsrF-like family - - - 0.000000000000000000000008611 105.0
BYDH1_k127_7495205_6 Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide-linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N-acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides K01207 - 3.2.1.52 0.000000005963 58.0
BYDH1_k127_7495205_7 - - - - 0.00000001708 60.0
BYDH1_k127_7528227_0 PFAM binding-protein-dependent transport systems inner membrane component K02037 - - 1e-234 744.0
BYDH1_k127_7528227_1 PBP superfamily domain K02040 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006754 479.0
BYDH1_k127_7528227_2 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005041 485.0
BYDH1_k127_7554801_0 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle K01595 - 4.1.1.31 0.0 1101.0
BYDH1_k127_7554801_1 SNF2 family N-terminal domain - - - 2.907e-282 906.0
BYDH1_k127_7554801_10 LPP20 lipoprotein K09860 - - 0.00000000000000000003233 99.0
BYDH1_k127_7554801_11 PilZ domain - - - 0.0000000002539 66.0
BYDH1_k127_7554801_12 - - - - 0.0002626 45.0
BYDH1_k127_7554801_2 Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control K00970 - 2.7.7.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008928 509.0
BYDH1_k127_7554801_3 Outer membrane protein transport protein (OMPP1/FadL/TodX) K06076 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001442 458.0
BYDH1_k127_7554801_4 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001003 341.0
BYDH1_k127_7554801_5 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 - 6.3.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000154 291.0
BYDH1_k127_7554801_6 Deoxynucleoside kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002365 278.0
BYDH1_k127_7554801_7 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 GO:0000287,GO:0003674,GO:0003824,GO:0003848,GO:0005488,GO:0016740,GO:0016772,GO:0016778,GO:0043167,GO:0043169,GO:0046872 2.7.6.3 0.0000000000000000000000000000000000000000000000005157 179.0
BYDH1_k127_7554801_8 Flagellar assembly protein T, C-terminal domain - - - 0.000000000000000000000000001283 127.0
BYDH1_k127_7554801_9 - - - - 0.0000000000000000000000001053 117.0
BYDH1_k127_7593729_0 Catalyzes the synthesis of GMP from XMP K01951 GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004165 414.0
BYDH1_k127_7593729_1 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K11991 - 3.5.4.33 0.00000000000000000000000000000000000000000000000000000000002071 211.0
BYDH1_k127_7593729_2 Phytochelatin synthase - - - 0.0000000000000000000000000000000000000000000002332 178.0
BYDH1_k127_7593729_3 Protein of unknown function DUF86 - - - 0.00000000000000000000000000000000001099 143.0
BYDH1_k127_7593729_4 - - - - 0.0000000000000000000000000000000004668 142.0
BYDH1_k127_7593729_5 Protein of unknown function (DUF504) - - - 0.0000000000000000000000000006938 115.0
BYDH1_k127_7593729_6 Virulence protein RhuM family - - - 0.00000000000000000000000008426 109.0
BYDH1_k127_7593729_7 domain protein - - - 0.000000000000006176 85.0
BYDH1_k127_7593729_8 Nucleotidyltransferase domain K07075 - - 0.0000000000000267 77.0
BYDH1_k127_7613160_0 Belongs to the PEP-utilizing enzyme family K08484 - 2.7.3.9 1.875e-275 867.0
BYDH1_k127_7613160_1 Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage K08311 - - 0.000000000000000000000000000000000000000000000000000000000000000000002716 240.0
BYDH1_k127_7613160_2 Phosphoserine phosphatase - - - 0.0000000000000000000000000000000000000000000000000005278 187.0
BYDH1_k127_7613160_3 - - - - 0.0000000000000004283 85.0
BYDH1_k127_7634658_0 Belongs to the cysteine synthase cystathionine beta- synthase family K12339 - 2.5.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004007 490.0
BYDH1_k127_7634658_1 UTP-glucose-1-phosphate uridylyltransferase K00963 - 2.7.7.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000197 428.0
BYDH1_k127_7634658_2 3'-5' exonuclease related to the exonuclease domain of PolB K07501 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003044 367.0
BYDH1_k127_7634658_3 Lactonase, 7-bladed beta-propeller - - - 0.0000000000000000000000000000000000000000000000000000000000001259 227.0
BYDH1_k127_7634658_4 Thymidine phosphorylase K00758 - 2.4.2.4 0.00000000000000000000000000005547 123.0
BYDH1_k127_7634658_5 - - - - 0.000000006274 58.0
BYDH1_k127_7737628_0 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 8.665e-201 635.0
BYDH1_k127_7737628_1 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype K01624 - 4.1.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004256 599.0
BYDH1_k127_7737628_2 Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S K03149 - 2.8.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000225 445.0
BYDH1_k127_7737628_3 Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA K03439 - 2.1.1.33 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001115 289.0
BYDH1_k127_7737628_4 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001789 263.0
BYDH1_k127_7737628_5 COG2104 Sulfur transfer protein involved in thiamine biosynthesis K03154 - - 0.0000000000000000003202 88.0
BYDH1_k127_7737628_6 - - - - 0.00000002786 55.0
BYDH1_k127_7758848_0 TrkA-N domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007274 562.0
BYDH1_k127_7758848_1 - - - - 0.000000000000000000000000000000000000000000000001928 177.0
BYDH1_k127_7758848_2 Protein involved in meta-pathway of phenol degradation - - - 0.0000000000000000000000000000000000000000000008558 178.0
BYDH1_k127_7758848_3 Domain of unkown function (DUF1775) K09796 - - 0.00000000000000000000000000000000000000000001461 170.0
BYDH1_k127_7758848_4 Domain of unknown function DUF302 - - - 0.0000000000000000000000000000000000000000001509 169.0
BYDH1_k127_7758848_5 - - - - 0.00000000000002078 80.0
BYDH1_k127_7780201_0 Subtilase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002879 522.0
BYDH1_k127_7780201_1 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis K00560 GO:0000287,GO:0003674,GO:0003824,GO:0004799,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006220,GO:0006221,GO:0006231,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009157,GO:0009162,GO:0009165,GO:0009176,GO:0009177,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009314,GO:0009394,GO:0009628,GO:0009987,GO:0016740,GO:0016741,GO:0018130,GO:0019438,GO:0019637,GO:0019692,GO:0032259,GO:0034641,GO:0034654,GO:0042083,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046073,GO:0046385,GO:0046483,GO:0046872,GO:0050896,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002636 465.0
BYDH1_k127_7780201_2 SAM-dependent K06969 - 2.1.1.191 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000096 454.0
BYDH1_k127_7780201_3 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000115 396.0
BYDH1_k127_7780201_4 Mediates influx of magnesium ions K03284 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005249 354.0
BYDH1_k127_7780201_5 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis K00287,K18590 - 1.5.1.3 0.00000000000000000000000000000000000000001053 158.0
BYDH1_k127_7806551_0 Aldehyde dehydrogenase family K00128 - 1.2.1.3 1.9e-228 719.0
BYDH1_k127_7806551_1 saccharopine dehydrogenase activity K00290 - 1.5.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001669 499.0
BYDH1_k127_7806551_3 Pyridine nucleotide-disulphide oxidoreductase K05297,K12265 - 1.18.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003578 377.0
BYDH1_k127_7806551_4 Response regulator receiver K03413 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005975 261.0
BYDH1_k127_7806551_5 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000000000000000002217 173.0
BYDH1_k127_7806551_6 Provides the (R)-glutamate required for cell wall biosynthesis K01776 GO:0000270,GO:0003674,GO:0003824,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016853,GO:0016854,GO:0016855,GO:0030203,GO:0034645,GO:0036361,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0047661,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 5.1.1.3 0.0000000000000000000000000001564 117.0
BYDH1_k127_7806551_7 rubredoxin - GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0005515,GO:0006091,GO:0006807,GO:0008150,GO:0008152,GO:0008199,GO:0009055,GO:0009987,GO:0010467,GO:0016491,GO:0019538,GO:0022900,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0046872,GO:0046914,GO:0051604,GO:0055114,GO:0070678,GO:0071704,GO:1901564 - 0.000000000000000000000000001531 111.0
BYDH1_k127_7907934_0 Aldehyde K07303 - 1.3.99.16 1.642e-271 857.0
BYDH1_k127_7907934_1 Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family K07402 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000308 276.0
BYDH1_k127_7907934_2 [2Fe-2S] binding domain K03518 - 1.2.5.3 0.0000000000000000000000000000000000000000000000000000000000000000002484 232.0
BYDH1_k127_7907934_3 MobA-Related Protein K07141 - 2.7.7.76 0.0000000005157 63.0
BYDH1_k127_7907934_4 membrane K08988 - - 0.00000005049 54.0
BYDH1_k127_7924931_0 MMPL family K07003 - - 2.228e-277 874.0
BYDH1_k127_7924931_1 surface antigen variable number repeat protein K07001 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005894 545.0
BYDH1_k127_7924931_2 nuclease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002547 392.0
BYDH1_k127_7924931_3 RHS Repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000008891 268.0
BYDH1_k127_7924931_4 Bacterial transcriptional repressor C-terminal - - - 0.000000000000000000000000000000000000000000000001107 181.0
BYDH1_k127_7924931_5 Leucine-rich repeat K13730 - - 0.00000000000000000000000000007616 136.0
BYDH1_k127_7924931_6 Galactose-1-phosphate uridyl transferase, N-terminal domain K00965 - 2.7.7.12 0.000000003939 58.0
BYDH1_k127_7938219_0 in Yersinia the HmsR protein is an inner membrane protein K11936 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002906 422.0
BYDH1_k127_7938219_1 Hypothetical glycosyl hydrolase family 13 K11931 - - 0.0000000000000000000000000000000000000000000000000000000008956 220.0
BYDH1_k127_7938219_2 Poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA K11935 - - 0.00000000008893 73.0
BYDH1_k127_7952614_0 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002712 430.0
BYDH1_k127_7952614_1 Belongs to the SAICAR synthetase family K01923 GO:0003674,GO:0003824,GO:0004639,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001868 387.0
BYDH1_k127_7952614_10 Transcriptional regulator K13643 - - 0.000000000000000000000000000000000004461 141.0
BYDH1_k127_7952614_12 Tetratricopeptide repeat - - - 0.00000000000000000000000003178 124.0
BYDH1_k127_7952614_13 - - - - 0.0000000000000000007817 93.0
BYDH1_k127_7952614_14 DNA-directed DNA polymerase activity - - - 0.0000000000005798 82.0
BYDH1_k127_7952614_15 guanyl-nucleotide exchange factor activity K01179,K03929,K09612,K12287,K19701,K19702 GO:0003674,GO:0003824,GO:0004177,GO:0005575,GO:0005623,GO:0006464,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0009987,GO:0016787,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0036211,GO:0042597,GO:0043170,GO:0043412,GO:0043687,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.2.1.4,3.4.11.10,3.4.11.24,3.4.11.6 0.000000000009444 78.0
BYDH1_k127_7952614_16 23S rRNA-intervening sequence protein - - - 0.00000002746 56.0
BYDH1_k127_7952614_2 ZIP Zinc transporter K16267 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007673 273.0
BYDH1_k127_7952614_3 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016436,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070042,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.193 0.00000000000000000000000000000000000000000000000000000000000000000000000009648 255.0
BYDH1_k127_7952614_4 A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters K04488 - - 0.00000000000000000000000000000000000000000000000000000000000000000003742 233.0
BYDH1_k127_7952614_5 membrane organization K20543 - - 0.0000000000000000000000000000000000000000000000000000000000000000006158 232.0
BYDH1_k127_7952614_6 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.000000000000000000000000000000000000000000000000000000000000000001098 232.0
BYDH1_k127_7952614_7 (Lipo)protein K07287 - - 0.0000000000000000000000000000000000000000000000000000000002017 216.0
BYDH1_k127_7952614_8 Protein of unknown function (DUF3047) - - - 0.0000000000000000000000000000000000000000000000000000000002973 209.0
BYDH1_k127_7952614_9 PFAM Amino acid-binding ACT K03567 - - 0.0000000000000000000000000000000000000000000000000000139 194.0
BYDH1_k127_7999176_0 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 3.305e-199 629.0
BYDH1_k127_7999176_1 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005548 427.0
BYDH1_k127_7999176_2 PFAM Prephenate dehydratase K14170 - 4.2.1.51,5.4.99.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001646 356.0
BYDH1_k127_7999176_3 PFAM Prephenate dehydrogenase K04517 - 1.3.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007858 336.0
BYDH1_k127_7999176_4 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 GO:0003674,GO:0003824,GO:0004127,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006573,GO:0006575,GO:0006725,GO:0006732,GO:0006753,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009117,GO:0009123,GO:0009165,GO:0009314,GO:0009628,GO:0009987,GO:0010165,GO:0010212,GO:0015939,GO:0015940,GO:0015949,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0034654,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046939,GO:0046940,GO:0050145,GO:0050896,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.4.25 0.0000000000000000000000000000000001761 137.0
BYDH1_k127_8068960_0 ABC transporter transmembrane region K06147 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007255 366.0
BYDH1_k127_8068960_1 Nitroreductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000531 222.0
BYDH1_k127_8068960_2 Thioredoxin-like - - - 0.00000000000000000000000000000000000000000000000000000000002507 210.0
BYDH1_k127_8068960_3 PFAM Cold-shock protein, DNA-binding K03704 - - 0.000000000000000000000000000008599 122.0
BYDH1_k127_8076062_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009314,GO:0009380,GO:0009628,GO:0032991,GO:0042802,GO:0044424,GO:0044464,GO:0050896,GO:1902494,GO:1905347,GO:1905348,GO:1990391 - 0.0 1012.0
BYDH1_k127_8076062_1 PFAM Aminotransferase class I and II K00812 - 2.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002542 550.0
BYDH1_k127_816398_0 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 1.341e-221 697.0
BYDH1_k127_816398_1 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009679 566.0
BYDH1_k127_816398_10 COG4942 Membrane-bound metallopeptidase - GO:0000920,GO:0001896,GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0008219,GO:0009273,GO:0009314,GO:0009628,GO:0009987,GO:0012501,GO:0016020,GO:0016787,GO:0030288,GO:0030313,GO:0031975,GO:0032153,GO:0042221,GO:0042493,GO:0042546,GO:0042597,GO:0043085,GO:0044085,GO:0044093,GO:0044464,GO:0050790,GO:0050896,GO:0051301,GO:0051336,GO:0051345,GO:0065007,GO:0065009,GO:0071554,GO:0071840,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007588 283.0
BYDH1_k127_816398_11 TIGRFAM DJ-1 family protein K03152 - 3.5.1.124 0.0000000000000000000000000000000000000000000000000000000000000000009615 232.0
BYDH1_k127_816398_12 Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide K03216 GO:0001510,GO:0002128,GO:0002130,GO:0002131,GO:0002132,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016300,GO:0016427,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042802,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0052665,GO:0052666,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.207 0.00000000000000000000000000000000000000000000000000000000000000005087 226.0
BYDH1_k127_816398_13 One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA K03071 - - 0.00000000000000000000000000000000000000000000000000000000000652 211.0
BYDH1_k127_816398_14 Competence protein - - - 0.000000000000000000000000000000000000000000000000000000000392 210.0
BYDH1_k127_816398_15 Thioredoxin K03672 - 1.8.1.8 0.0000000000000000000000000000000000000000000000000000000006464 205.0
BYDH1_k127_816398_16 regulatory protein, arsR - - - 0.00000000000000000000000000000000000000000000001597 175.0
BYDH1_k127_816398_17 Belongs to the bacterial ribosomal protein bL28 family K02902 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000003471 147.0
BYDH1_k127_816398_18 PFAM Rhodanese-like - - - 0.00000000000000000000000000000000001487 139.0
BYDH1_k127_816398_19 Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins K03676 - - 0.0000000000000000000009963 100.0
BYDH1_k127_816398_2 Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily K17828 - 1.3.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006342 520.0
BYDH1_k127_816398_20 Belongs to the bacterial ribosomal protein bL33 family K02913 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042221,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046677,GO:0050896,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000001049 94.0
BYDH1_k127_816398_21 chemotaxis protein K03413 - - 0.0000000000000000005499 91.0
BYDH1_k127_816398_22 YfaZ precursor - - - 0.00000000000000507 84.0
BYDH1_k127_816398_3 PFAM Fatty acid desaturase K00507 - 1.14.19.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001201 497.0
BYDH1_k127_816398_4 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 - 2.7.7.56 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002046 370.0
BYDH1_k127_816398_5 Glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009878 367.0
BYDH1_k127_816398_6 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001256 382.0
BYDH1_k127_816398_7 Biotin and Thiamin Synthesis associated domain K01012,K16180 - 2.8.1.6,5.4.99.58 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005552 316.0
BYDH1_k127_816398_8 PFAM Sporulation domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002265 308.0
BYDH1_k127_816398_9 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0035870,GO:0036220,GO:0036222,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0046872,GO:0046983,GO:0047429,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 3.6.1.66 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000101 279.0
BYDH1_k127_8246335_0 DNA segregation ATPase FtsK SpoIIIE K03466 - - 2.674e-294 921.0
BYDH1_k127_8246335_1 alanine dehydrogenase K00259 - 1.4.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002196 431.0
BYDH1_k127_8246335_2 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001005 427.0
BYDH1_k127_8246335_3 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000004207 254.0
BYDH1_k127_8246335_4 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) K03634 - - 0.000000000000000000000000000000000000000000000000000000006776 205.0
BYDH1_k127_8246335_5 ABC transporter, phosphonate, periplasmic substrate-binding protein K02044 - - 0.0000000000000000000000000000000000000000000000000000005715 202.0
BYDH1_k127_8246335_6 Uncharacterized protein conserved in bacteria (DUF2059) K09924 - - 0.0000000000000000000001634 103.0
BYDH1_k127_8246335_7 Chemotaxis protein histidine kinase and related - - - 0.0000000007661 72.0
BYDH1_k127_8272190_0 PFAM von Willebrand factor type A - - - 0.0 1101.0
BYDH1_k127_8272190_1 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 0.0 1051.0
BYDH1_k127_8272190_10 diguanylate cyclase - - - 0.0000000000000000000000000000000001884 150.0
BYDH1_k127_8272190_11 TonB-dependent receptor K02014 - - 0.000000000000000000005969 103.0
BYDH1_k127_8272190_12 PBP superfamily domain K02040 - - 0.000000000000000000006363 104.0
BYDH1_k127_8272190_13 Enoyl-(Acyl carrier protein) reductase - - - 0.000000000000000001649 90.0
BYDH1_k127_8272190_14 Cytochrome c - - - 0.0000000004533 64.0
BYDH1_k127_8272190_2 RuBisCO catalyzes two reactions the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site K01601 - 4.1.1.39 9.835e-298 915.0
BYDH1_k127_8272190_3 Putative diguanylate phosphodiesterase - - - 3.096e-225 724.0
BYDH1_k127_8272190_4 ATPase associated with various cellular activities, AAA_5 K04748 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001735 464.0
BYDH1_k127_8272190_5 Bacterial regulatory helix-turn-helix protein, lysR family K21703 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003654 358.0
BYDH1_k127_8272190_6 COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 K03148,K21029 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006732,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019538,GO:0019637,GO:0019720,GO:0043170,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0051189,GO:0061605,GO:0070566,GO:0071704,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.7.73,2.7.7.80 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009491 304.0
BYDH1_k127_8272190_7 PFAM Ribulose bisphosphate carboxylase, small chain K01602 - 4.1.1.39 0.00000000000000000000000000000000000000000000000000000000000002294 215.0
BYDH1_k127_8272190_8 Rhodanese Homology Domain - - - 0.0000000000000000000000000000000000000000000000000000000003138 213.0
BYDH1_k127_8272190_9 - - - - 0.0000000000000000000000000000000000000002604 149.0
BYDH1_k127_8303974_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004177 421.0
BYDH1_k127_8303974_1 Concanavalin A-like lectin/glucanases superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006662 284.0
BYDH1_k127_8303974_2 domain protein - - - 0.0000000000000006363 88.0
BYDH1_k127_8303974_3 radical SAM protein YgiQ - - - 0.0000000000007559 69.0
BYDH1_k127_8303974_4 heat shock protein binding - - - 0.00000000006624 73.0
BYDH1_k127_8303974_5 heat shock protein binding - - - 0.00001077 50.0
BYDH1_k127_8311099_0 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 - 2.2.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005294 402.0
BYDH1_k127_8311099_1 adenosyltransferase K00798 - 2.5.1.17 0.0000000000000000000000000000000000000000000000000000000000000000003749 233.0
BYDH1_k127_8311099_2 TonB dependent receptor K02014 - - 0.00000000000000000000000000000000000000000000000000000000000001388 239.0
BYDH1_k127_8311099_3 ABC-type Fe3 -hydroxamate transport system, periplasmic component K02016 - - 0.0000000000000000000000000000000000000001382 153.0
BYDH1_k127_8311099_4 Sulfatase-modifying factor enzyme 1 - - - 0.0000000000000000000000000000000000000006162 159.0
BYDH1_k127_8311099_5 TIGRFAM cold shock domain protein CspD K03704 GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006275,GO:0006355,GO:0006950,GO:0008150,GO:0008156,GO:0009266,GO:0009409,GO:0009605,GO:0009628,GO:0009889,GO:0009890,GO:0009892,GO:0009991,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031667,GO:0042594,GO:0044424,GO:0044444,GO:0044464,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051053,GO:0051171,GO:0051172,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1903506,GO:2000112,GO:2000113,GO:2001141 - 0.000000000000000000001888 97.0
BYDH1_k127_8311099_6 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.0000000005957 70.0
BYDH1_k127_8366405_0 heat shock protein binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002209 508.0
BYDH1_k127_8366405_1 in Yersinia the HmsR protein is an inner membrane protein K11936 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006608 461.0
BYDH1_k127_8366405_2 peptidase activity, acting on L-amino acid peptides K01337,K01400,K20276 - 3.4.21.50,3.4.24.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002775 352.0
BYDH1_k127_8366405_3 Histidine triad (Hit) protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000008484 235.0
BYDH1_k127_8366405_4 Domain of unknown function (DUF4279) - - - 0.000000000000000000000000000000000000000000000000000000000005899 210.0
BYDH1_k127_8366405_5 Hypothetical glycosyl hydrolase family 13 K11931 - - 0.00000000000000000000000000000000000000000000000000000001888 216.0
BYDH1_k127_8366405_6 COG0457 FOG TPR repeat - - - 0.00000000000000000000000000000000000001009 146.0
BYDH1_k127_8366405_8 alginic acid biosynthetic process - - - 0.00000000000000003813 97.0
BYDH1_k127_8366405_9 Tetratricopeptide repeats K11935 - - 0.0000000000005465 81.0
BYDH1_k127_8408750_0 Mycolic acid cyclopropane synthetase K00574 - 2.1.1.79 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003498 484.0
BYDH1_k127_8408750_1 Protein of unknown function (DUF1722) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003171 364.0
BYDH1_k127_8408750_2 Belongs to the glutathione peroxidase family - - - 0.0000000000000000000000000000000000000001301 152.0
BYDH1_k127_8408750_3 Protein of unknown function (DUF2878) - - - 0.000000000000000000000000000000000000002211 154.0
BYDH1_k127_8408750_4 Protein of unknown function (DUF2892) - - - 0.000369 46.0
BYDH1_k127_8423003_0 TIGRFAM urea ABC transporter, ATP-binding protein UrtD K11962 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004297 395.0
BYDH1_k127_8423003_1 4Fe-4S ferredoxin iron-sulfur binding domain protein K11473 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000129 382.0
BYDH1_k127_8423003_2 ATPases associated with a variety of cellular activities K11963 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001455 341.0
BYDH1_k127_8423003_3 Belongs to the binding-protein-dependent transport system permease family K11961 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001048 339.0
BYDH1_k127_8423003_4 Ferredoxin - - - 0.000000000000000000000000000000000000000000000004353 173.0
BYDH1_k127_8423003_5 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.00000000001309 66.0
BYDH1_k127_8450556_0 response regulator receiver K02487,K06596 - - 5.714e-237 767.0
BYDH1_k127_8450556_1 CheB methylesterase K06597 - - 0.0000000000000000000000000000000000000000000000000000000001527 218.0
BYDH1_k127_8450556_2 Two component signalling adaptor domain K06598 - - 0.00000000000000000000000001475 115.0
BYDH1_k127_8726307_0 response regulator receiver K02481 - - 3.916e-194 614.0
BYDH1_k127_8726307_1 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004777 554.0
BYDH1_k127_8726307_2 Sugar transferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003336 458.0
BYDH1_k127_8726307_3 Type II secretory pathway, component ExeA - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003638 314.0
BYDH1_k127_8730358_0 Inositol monophosphatase K01092 - 3.1.3.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008715 389.0
BYDH1_k127_8730358_1 Type II/IV secretion system protein K02670 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002355 359.0
BYDH1_k127_8730358_2 PFAM Rhodanese domain protein K01011 - 2.8.1.1,2.8.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001284 309.0
BYDH1_k127_8730358_3 Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA K02533,K15396 - 2.1.1.200 0.00000000000000000000000000000000001029 142.0
BYDH1_k127_8730358_4 Sel1-like repeats. - - - 0.0000001102 58.0
BYDH1_k127_881857_0 Pirin C-terminal cupin domain K06911 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002558 479.0
BYDH1_k127_881857_1 ABC transporter transmembrane region K06147 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001136 456.0
BYDH1_k127_881857_2 - - - - 0.0000000000000000000000006156 107.0
BYDH1_k127_8958464_0 5'-nucleotidase, C-terminal domain K01119 - 3.1.3.6,3.1.4.16 1.897e-204 655.0
BYDH1_k127_8958464_1 it can initiate unwinding at a nick in the DNA. It binds to the single-stranded DNA and acts in a progressive fashion along the DNA in the 3' to 5' direction K03656 - 3.6.4.12 2.752e-204 646.0
BYDH1_k127_8958464_2 Domain of unknown function (DUF4188) - - - 0.0000000000000000000000000000000000000000000000000000000005154 205.0
BYDH1_k127_8958464_3 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.0000000000000000000000000000000000000000000001466 171.0
BYDH1_k127_9016899_0 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01916,K01950 - 6.3.1.5,6.3.5.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009233 606.0
BYDH1_k127_9016899_1 Responsible for synthesis of pseudouridine from uracil K06180 GO:0000027,GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022607,GO:0022613,GO:0022618,GO:0031118,GO:0034470,GO:0034622,GO:0034641,GO:0034660,GO:0042254,GO:0042255,GO:0042273,GO:0043170,GO:0043412,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:1901360 5.4.99.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005758 391.0
BYDH1_k127_9016899_2 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006936 392.0
BYDH1_k127_9016899_3 Flavin containing amine oxidoreductase K00274 - 1.4.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006854 309.0
BYDH1_k127_9016899_4 phosphoserine phosphatase K01079 - 3.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001611 301.0
BYDH1_k127_9016899_5 Belongs to the multicopper oxidase YfiH RL5 family K05810 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004038 291.0
BYDH1_k127_9016899_6 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K05807 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001305 260.0
BYDH1_k127_9016899_7 Belongs to the P(II) protein family K04751 GO:0000166,GO:0003674,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006808,GO:0008144,GO:0008150,GO:0009889,GO:0010565,GO:0017076,GO:0019216,GO:0019217,GO:0019222,GO:0030234,GO:0030554,GO:0031323,GO:0031326,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042304,GO:0042802,GO:0043167,GO:0043168,GO:0044424,GO:0044444,GO:0044464,GO:0046890,GO:0050789,GO:0050790,GO:0050794,GO:0062012,GO:0065007,GO:0065009,GO:0080090,GO:0097159,GO:0097367,GO:0098772,GO:1901265,GO:1901363 - 0.0000000000000000000000000000000000000000000000000000001101 198.0
BYDH1_k127_9034310_0 Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress K04083 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001604 324.0
BYDH1_k127_9034310_1 Sigma 54 modulation protein / S30EA ribosomal protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004427 250.0
BYDH1_k127_9034310_2 HEAT repeats - - - 0.00000000000000000000000000000000000000000000000000000009852 204.0
BYDH1_k127_9034310_3 Sel1 domain protein repeat-containing protein K07126 - - 0.000000000000000000003028 102.0
BYDH1_k127_9034310_4 Lytic polysaccharide mono-oxygenase, cellulose-degrading - - - 0.000000000000000008716 96.0
BYDH1_k127_9034310_5 RNA pseudouridylate synthase K06178 - 5.4.99.22 0.00000372 50.0
BYDH1_k127_9239938_0 Surface antigen variable number K07278 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001752 481.0
BYDH1_k127_9239938_1 Evidence 4 Homologs of previously reported genes of - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005298 413.0
BYDH1_k127_9239938_2 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000000000000000000000000000000007061 169.0
BYDH1_k127_9239938_3 - - - - 0.000000000000000000003651 93.0
BYDH1_k127_9239938_4 Pathogenicity protein K09800 - - 0.0000000000307 72.0
BYDH1_k127_9239938_5 Protein of unknown function (DUF2934) - - - 0.00000000007037 64.0
BYDH1_k127_934748_0 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 8.867e-264 820.0
BYDH1_k127_934748_1 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003458 580.0
BYDH1_k127_934748_2 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000166 331.0
BYDH1_k127_934748_3 Phage SPO1 DNA polymerase-related protein K21929 - 3.2.2.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003494 286.0
BYDH1_k127_934748_4 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.5.1.75 0.00000000000000000000000000000000000000000000000000000002664 201.0
BYDH1_k127_934748_5 Ribosomal-protein-alanine acetyltransferase K03789 - 2.3.1.128 0.000000000000000000000000000000000000000000000009281 175.0
BYDH1_k127_934748_6 Protein involved in meta-pathway of phenol degradation - - - 0.0000000000000211 77.0
BYDH1_k127_9371926_0 PFAM Response regulator receiver domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008272 312.0
BYDH1_k127_9371926_1 Prokaryotic cytochrome b561 - - - 0.000000000000000000000000000000000000000000000000000000000000000001472 233.0
BYDH1_k127_9371926_2 PFAM Formylglycine-generating sulfatase enzyme - - - 0.00000000000000000000000000000000000000000000000000007559 197.0
BYDH1_k127_9371926_3 Dihaem cytochrome c - - - 0.0000000000000000000000000000000000000001533 159.0
BYDH1_k127_9371926_4 Domain of unknown function (DUF1924) - - - 0.00000000000000000000000000000000009846 140.0
BYDH1_k127_9371926_5 PFAM Propeptide PepSY amd peptidase M4 - - - 0.0000000000003813 75.0
BYDH1_k127_9371926_6 - - - - 0.0000000000004959 69.0
BYDH1_k127_9376695_0 Heat shock 70 kDa protein K04043 - - 2e-322 996.0
BYDH1_k127_9376695_1 Belongs to the monovalent cation proton antiporter 2 (cpa2) transporter (TC 2.A.37) family K03455 - - 6.046e-202 646.0
BYDH1_k127_9376695_11 DsrE/DsrF-like family K09004 - - 0.0000000000000000000000000000000000000002203 154.0
BYDH1_k127_9376695_12 repeat-containing protein - - - 0.000000000000000000000006605 106.0
BYDH1_k127_9376695_13 Belongs to the UPF0125 (RnfH) family K09801 - - 0.00000000000000000000007884 102.0
BYDH1_k127_9376695_14 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K06186 - - 0.0000000000000000000001523 100.0
BYDH1_k127_9376695_15 - - - - 0.000000000001905 79.0
BYDH1_k127_9376695_2 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 GO:0006457,GO:0008150,GO:0009987 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001356 565.0
BYDH1_k127_9376695_3 May be involved in recombinational repair of damaged DNA K03631 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000468 516.0
BYDH1_k127_9376695_4 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001479 393.0
BYDH1_k127_9376695_5 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007547 307.0
BYDH1_k127_9376695_6 the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA K03664 - - 0.000000000000000000000000000000000000000000000000000000000000000000001925 239.0
BYDH1_k127_9376695_7 Ferric uptake regulator family K03711 - - 0.000000000000000000000000000000000000000000000000000000000004262 210.0
BYDH1_k127_9376695_8 Polyketide cyclase dehydrase and lipid transport - - - 0.0000000000000000000000000000000000000000000000000000001049 198.0
BYDH1_k127_9376695_9 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.000000000000000000000000000000000000000000001237 172.0
BYDH1_k127_9455224_0 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 6.506e-222 695.0
BYDH1_k127_9455224_1 homoserine dehydrogenase K00003 - 1.1.1.3 5.752e-204 642.0
BYDH1_k127_9455224_10 YcgL domain-containing protein K09902 - - 0.0000000000000005123 80.0
BYDH1_k127_9455224_2 threonine synthase K01733 - 4.2.3.1 1.495e-195 613.0
BYDH1_k127_9455224_3 PFAM Aminotransferase class I and II K14261 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000203 475.0
BYDH1_k127_9455224_4 Thiopurine S-methyltransferase (TPMT) K00569 - 2.1.1.67 0.00000000000000000000000000000000000000000000000000000000000000001173 231.0
BYDH1_k127_9455224_5 Belongs to the UPF0502 family K09915 - - 0.00000000000000000000000000000000000000000000000000000000003727 212.0
BYDH1_k127_9455224_6 Protein of unknown function (DUF1631) - - - 0.000000000000000000000000000000000000000000001344 186.0
BYDH1_k127_9455224_7 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000000000000000000000001673 129.0
BYDH1_k127_9455224_8 Protein of unknown function (DUF3579) - - - 0.0000000000000000000000000001875 118.0
BYDH1_k127_9455224_9 NERD domain protein - - - 0.000000000000000000000000008425 118.0
BYDH1_k127_9456488_0 Catalyzes the reversible hydration of fumarate to (S)- malate K01676 - 4.2.1.2 1.6e-254 797.0
BYDH1_k127_9456488_1 Phosphoribosylformylglycinamidine cyclo-ligase K01933 - 6.3.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007774 479.0
BYDH1_k127_9456488_10 translation elongation factor activity K02358 - - 0.0000000000000000003199 87.0
BYDH1_k127_9456488_2 AI-2E family transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004143 376.0
BYDH1_k127_9456488_3 Belongs to the WrbA family K03809 - 1.6.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002754 284.0
BYDH1_k127_9456488_4 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001676 271.0
BYDH1_k127_9456488_5 Belongs to the DnaA family. HdA subfamily K10763 GO:0000166,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006275,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008156,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010556,GO:0010558,GO:0010605,GO:0016020,GO:0017076,GO:0019219,GO:0019222,GO:0030174,GO:0030554,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032297,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0043531,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0045934,GO:0046483,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051052,GO:0051053,GO:0051171,GO:0051172,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0090329,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901363,GO:1901576,GO:2000104,GO:2000112,GO:2000113 - 0.000000000000000000000000000000000000000000000000000000000000000005627 240.0
BYDH1_k127_9456488_6 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.0000000000000000000000000000000000000000000000000000000000002026 216.0
BYDH1_k127_9456488_7 protein conserved in bacteria K09938 - - 0.000000000000000000000000000000000000000000000000000000000231 218.0
BYDH1_k127_9456488_8 PFAM CDP-alcohol phosphatidyltransferase K08744 - 2.7.8.41 0.00000000000000000000000000000000000000000000000003454 188.0
BYDH1_k127_9456488_9 - - - - 0.0000000000000000002219 91.0
BYDH1_k127_9457596_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 - 2.7.7.6 0.0 2213.0
BYDH1_k127_9457596_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 - 2.7.7.6 0.0 2134.0
BYDH1_k127_9457596_2 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.0 1144.0
BYDH1_k127_9457596_3 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 - - 0.0000000000000000000000000000000000000000000000000000000000000000005208 229.0
BYDH1_k127_9457596_4 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 - - 0.000000000000000000000000000000000000000000000000000000000000000007632 228.0
BYDH1_k127_9457596_5 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.000000000000000000000000001699 112.0
BYDH1_k127_9457596_6 translation elongation factor activity K02358 - - 0.0000000000000000008747 85.0
BYDH1_k127_9465718_0 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000183 445.0
BYDH1_k127_9465718_1 Calcineurin-like phosphoesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001093 413.0
BYDH1_k127_9465718_2 Amino acid permease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001433 323.0
BYDH1_k127_9465718_3 Protein of unknown function (DUF1566) - - - 0.00000000000000000000000000000000002171 141.0
BYDH1_k127_9465718_4 Cytochrome c - - - 0.000000000000000000000000001586 117.0
BYDH1_k127_9491430_0 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005779 600.0
BYDH1_k127_9491430_1 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766 - 2.4.2.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003833 449.0
BYDH1_k127_9491430_10 Helix-turn-helix XRE-family like proteins - - - 0.00001419 54.0
BYDH1_k127_9491430_2 Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine K01611 GO:0003674,GO:0003824,GO:0004014,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006576,GO:0006595,GO:0006596,GO:0006807,GO:0008150,GO:0008152,GO:0008216,GO:0008295,GO:0009058,GO:0009308,GO:0009309,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0034641,GO:0042401,GO:0044106,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0097164,GO:1901564,GO:1901566,GO:1901576 4.1.1.50 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002331 421.0
BYDH1_k127_9491430_3 Belongs to the TrpC family K01609 GO:0003674,GO:0003824,GO:0004425,GO:0016829,GO:0016830,GO:0016831 4.1.1.48 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003712 359.0
BYDH1_k127_9491430_4 with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine K01658 - 4.1.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001304 321.0
BYDH1_k127_9491430_5 helix_turn_helix, cAMP Regulatory protein K10914 GO:0000166,GO:0003674,GO:0003676,GO:0003677,GO:0003700,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006355,GO:0006725,GO:0006807,GO:0007154,GO:0007584,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009605,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0009991,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0016070,GO:0017076,GO:0018130,GO:0019001,GO:0019219,GO:0019222,GO:0019438,GO:0030551,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031667,GO:0031668,GO:0031669,GO:0031670,GO:0032553,GO:0032555,GO:0032561,GO:0032774,GO:0032991,GO:0032993,GO:0034641,GO:0034645,GO:0034654,GO:0035438,GO:0036094,GO:0042221,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0045013,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0045990,GO:0046483,GO:0046983,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0051716,GO:0060255,GO:0061984,GO:0061985,GO:0065007,GO:0070887,GO:0071496,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0097367,GO:0097659,GO:0140110,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:2000112,GO:2000113,GO:2001141 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005772 312.0
BYDH1_k127_9491430_6 Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol K06134 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005327 277.0
BYDH1_k127_9491430_7 OsmC-like protein K07397 - - 0.0000000000000000000000000000000000000000000000000000000000007817 214.0
BYDH1_k127_9491430_8 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000000000000000000000000000000000000005025 184.0
BYDH1_k127_9491430_9 FmdB family transcriptional regulator - - - 0.000000000000002388 77.0
BYDH1_k127_9655055_0 ABC transporter transmembrane region K06147 - - 1.203e-244 769.0
BYDH1_k127_9655055_1 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003358 631.0
BYDH1_k127_9655055_10 cheY-homologous receiver domain - - - 0.0000000000000000001135 94.0
BYDH1_k127_9655055_11 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.0003443 52.0
BYDH1_k127_9655055_2 cytochrome K00428 GO:0000302,GO:0003674,GO:0003824,GO:0004130,GO:0004601,GO:0005488,GO:0006091,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009061,GO:0009636,GO:0009987,GO:0010035,GO:0015980,GO:0016209,GO:0016491,GO:0016684,GO:0016999,GO:0017144,GO:0019645,GO:0020037,GO:0022900,GO:0022904,GO:0042221,GO:0042493,GO:0042542,GO:0042743,GO:0044237,GO:0045333,GO:0046677,GO:0046906,GO:0048037,GO:0050896,GO:0051186,GO:0051716,GO:0055114,GO:0070887,GO:0072593,GO:0097159,GO:0097237,GO:0098754,GO:0098869,GO:1901363,GO:1901700,GO:1990748 1.11.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005393 302.0
BYDH1_k127_9655055_3 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 2.3.1.15 0.00000000000000000000000000000000000000000000000000000000005007 211.0
BYDH1_k127_9655055_4 diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000002751 211.0
BYDH1_k127_9655055_5 Helix-turn-helix domain - - - 0.00000000000000000000000000000000000000000000000000001922 194.0
BYDH1_k127_9655055_6 PFAM 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK K00950 - 2.7.6.3 0.00000000000000000000000000000000000000000000001003 176.0
BYDH1_k127_9655055_7 Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin K01633 - 1.13.11.81,4.1.2.25,5.1.99.8 0.000000000000000000000000000000000000000000001518 167.0
BYDH1_k127_9655055_8 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.0000000000000000000000000000000000000007382 159.0
BYDH1_k127_9655055_9 Barrel-sandwich domain of CusB or HlyD membrane-fusion K02005,K13888 - - 0.00000000000000000004592 94.0
BYDH1_k127_9709758_0 TIGRFAM Acetolactate synthase, large subunit, biosynthetic K01652 - 2.2.1.6 3.061e-317 976.0
BYDH1_k127_9709758_1 ABC-type transport system involved in lysophospholipase L1 biosynthesis permease component K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004893 466.0
BYDH1_k127_9709758_2 COG0440 Acetolactate synthase, small (regulatory) subunit K01653 GO:0003674,GO:0003824,GO:0003984,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005948,GO:0006082,GO:0006520,GO:0006549,GO:0006573,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009097,GO:0009099,GO:0009987,GO:0016053,GO:0016740,GO:0016744,GO:0019752,GO:0032991,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494,GO:1990234 2.2.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000002232 250.0
BYDH1_k127_9709758_3 Protein involved in meta-pathway of phenol degradation - - - 0.00000000000000000000000000000000000000173 159.0
BYDH1_k127_9709758_4 Protein of unknown function (DUF3579) - - - 0.0000000000000000000009207 98.0
BYDH1_k127_9741460_0 transmembrane transcriptional regulator (Anti-sigma factor) - - - 0.000000000000000000000000000000000003738 148.0
BYDH1_k127_9741460_1 PFAM Ig domain protein group 2 domain protein - - - 0.000000000000000000000000000008384 137.0
BYDH1_k127_9741460_2 heat shock protein binding - - - 0.0000000000000000000000003906 122.0
BYDH1_k127_9741460_3 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000168 71.0
BYDH1_k127_9751436_0 lipoprotein K07121 GO:0000270,GO:0003674,GO:0005575,GO:0005623,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009279,GO:0009987,GO:0016020,GO:0019867,GO:0030203,GO:0030234,GO:0030312,GO:0030313,GO:0031241,GO:0031975,GO:0034645,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0044425,GO:0044462,GO:0044464,GO:0050790,GO:0065007,GO:0065009,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:0071944,GO:0098552,GO:0098772,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008221 411.0
BYDH1_k127_9751436_1 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003168 301.0
BYDH1_k127_9751436_2 PFAM transport-associated - - - 0.000000000000000000000000000000000000000000006958 171.0
BYDH1_k127_9751436_3 Belongs to the UPF0102 family K07460 - - 0.000000000000000000000000001524 116.0
BYDH1_k127_9751436_4 PFAM FAD linked oxidase domain protein K03777 - 1.1.5.12 0.000000000000001539 78.0
BYDH1_k127_9751767_0 TIGRFAM Oxaloacetate decarboxylase, alpha subunit K01960 - 6.4.1.1 4.766e-285 887.0
BYDH1_k127_9751767_1 TIGRFAM acetyl-CoA carboxylase, biotin carboxylase K01959 - 6.4.1.1 2.819e-238 743.0
BYDH1_k127_9751767_10 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.000000000000000000000000000000001063 131.0
BYDH1_k127_9751767_11 metal-binding, possibly nucleic acid-binding protein K07040 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000001406 120.0
BYDH1_k127_9751767_12 Belongs to the bacterial ribosomal protein bL32 family K02911 - - 0.00000000000000000000001926 100.0
BYDH1_k127_9751767_2 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003975 609.0
BYDH1_k127_9751767_3 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002069 534.0
BYDH1_k127_9751767_4 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006761 511.0
BYDH1_k127_9751767_5 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006231 456.0
BYDH1_k127_9751767_6 malonyl CoA-acyl carrier protein transacylase K00645 GO:0003674,GO:0003824,GO:0004312,GO:0004314,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016053,GO:0016417,GO:0016419,GO:0016420,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:0072330,GO:1901576 2.3.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008657 397.0
BYDH1_k127_9751767_7 signal peptide peptidase SppA, 36K type K04773 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003508 389.0
BYDH1_k127_9751767_8 PFAM Short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002885 357.0
BYDH1_k127_9751767_9 Maf-like protein K06287 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003243 254.0