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Overview

ID MAG00164
Name BYDH2_bin.11
Sample SMP0005
Taxonomy
Kingdom Bacteria
Phylum Pseudomonadota
Class Gammaproteobacteria
Order Burkholderiales
Family Nitrosomonadaceae
Genus Nitrosomonas
Species
Assembly information
Completeness (%) 82.61
Contamination (%) 0.0
GC content (%) 45.0
N50 (bp) 11,922
Genome size (bp) 2,127,966

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes2168

Gene name Description KEGG GOs EC E-value Score Sequence
BYDH2_k127_10066409_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 0.0 1140.0
BYDH2_k127_10066409_1 Glutamate-cysteine ligase K01919 - 6.3.2.2 5.948e-281 864.0
BYDH2_k127_10066409_2 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K11072 - 3.6.3.31 3.592e-215 670.0
BYDH2_k127_10066409_3 Belongs to the prokaryotic GSH synthase family K01920 - 6.3.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007446 529.0
BYDH2_k127_10066409_4 cytochrome c peroxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000349 470.0
BYDH2_k127_10066409_5 Cytochrome c - - - 0.0000000000000000000000003258 108.0
BYDH2_k127_10066409_6 - - - - 0.0000000000000000000002075 110.0
BYDH2_k127_10194050_0 response regulator K10943 - - 1.571e-217 677.0
BYDH2_k127_10194050_1 Signal transduction histidine kinase K10942 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001132 439.0
BYDH2_k127_10196815_0 Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell K00982 - 2.7.7.42,2.7.7.89 0.0 1610.0
BYDH2_k127_10196815_1 TIGRFAM Acetolactate synthase, large subunit, biosynthetic K01652 - 2.2.1.6 0.0 1139.0
BYDH2_k127_10196815_2 modulator of DNA gyrase K03568 - - 7.567e-312 957.0
BYDH2_k127_10196815_3 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 3.496e-213 664.0
BYDH2_k127_10196815_4 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K01501,K11206 - 3.5.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004491 556.0
BYDH2_k127_10196815_5 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001331 341.0
BYDH2_k127_10196815_6 TIGRFAM Acetolactate synthase, small subunit K01653 GO:0003674,GO:0003824,GO:0003984,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005948,GO:0006082,GO:0006520,GO:0006549,GO:0006573,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009097,GO:0009099,GO:0009987,GO:0016053,GO:0016740,GO:0016744,GO:0019752,GO:0032991,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494,GO:1990234 2.2.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002728 312.0
BYDH2_k127_10234143_0 DinB superfamily - - - 0.0 1434.0
BYDH2_k127_10234143_1 SNARE associated Golgi protein - - - 0.0 1345.0
BYDH2_k127_10234143_10 Las17-binding protein actin regulator - - - 0.000000000000000000000000000000000000000000000000000000000001446 214.0
BYDH2_k127_10234143_11 Las17-binding protein actin regulator - - - 0.0000000000000000000000000000000000000000000000000000003409 199.0
BYDH2_k127_10234143_12 - - - - 0.00000000000000000000000000000000000000000000000000003145 196.0
BYDH2_k127_10234143_13 - - - - 0.00000000000000000000000000000000000002637 150.0
BYDH2_k127_10234143_14 Protein of unknown function (DUF3313) - - - 0.000000000000000000000000000000001208 139.0
BYDH2_k127_10234143_15 Lysozyme inhibitor LprI - - - 0.00000000000000000000001008 102.0
BYDH2_k127_10234143_2 PFAM aminotransferase, class I K00842,K14155 - 4.4.1.8 1.701e-240 746.0
BYDH2_k127_10234143_3 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) K07755 - 2.1.1.137 3.662e-232 719.0
BYDH2_k127_10234143_4 Radical SAM superfamily - - - 2.858e-204 636.0
BYDH2_k127_10234143_5 ydiK promoter presents a PurR sequence, suggesting that its expression is purine-regulated - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001066 508.0
BYDH2_k127_10234143_6 Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001709 444.0
BYDH2_k127_10234143_7 Predicted periplasmic protein (DUF2092) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002698 355.0
BYDH2_k127_10234143_8 Belongs to the ompA family K03286 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002362 308.0
BYDH2_k127_10234143_9 Uncharacterized protein conserved in bacteria (DUF2064) K09931 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002808 296.0
BYDH2_k127_10289376_0 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.0 1356.0
BYDH2_k127_10289376_1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 0.0 1176.0
BYDH2_k127_10289376_10 EamA-like transporter family K15270 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000284 554.0
BYDH2_k127_10289376_11 TIGRFAM Pilus biogenesis stability type IV, PilW K02656 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007375 467.0
BYDH2_k127_10289376_12 Uracil DNA glycosylase superfamily K21929 - 3.2.2.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004136 439.0
BYDH2_k127_10289376_13 Tetratricopeptide repeat-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001141 401.0
BYDH2_k127_10289376_14 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995,K08744 - 2.7.8.41,2.7.8.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000446 375.0
BYDH2_k127_10289376_15 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003037 281.0
BYDH2_k127_10289376_16 Rhodanese Homology Domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000797 279.0
BYDH2_k127_10289376_17 Belongs to the UPF0178 family K09768 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003525 271.0
BYDH2_k127_10289376_18 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 - 2.7.4.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000001915 263.0
BYDH2_k127_10289376_19 SpoIIAA-like - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005414 246.0
BYDH2_k127_10289376_2 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 2.096e-298 916.0
BYDH2_k127_10289376_20 PFAM Invasion gene expression up-regulator, SirB - - - 0.00000000000000000000000000000000000000000000000000000000000000009527 224.0
BYDH2_k127_10289376_21 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000005284 167.0
BYDH2_k127_10289376_22 Protein of unknown function (DUF465) K09794 - - 0.0000000000000000000000000000000000000001266 151.0
BYDH2_k127_10289376_23 4-oxalocrotonate tautomerase K01821 - 5.3.2.6 0.000000000000000000000000000000003571 128.0
BYDH2_k127_10289376_24 Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis K03688 - - 0.00000000004067 64.0
BYDH2_k127_10289376_3 repeat protein - - - 2.379e-274 847.0
BYDH2_k127_10289376_4 synthetase, class II (G H P K01892 - 6.1.1.21 1.594e-264 816.0
BYDH2_k127_10289376_5 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 - 1.17.7.1,1.17.7.3 7.795e-263 810.0
BYDH2_k127_10289376_6 PFAM Rieske 2Fe-2S K00499 - 1.14.15.7 5.156e-253 779.0
BYDH2_k127_10289376_7 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K17713 - - 1.632e-230 717.0
BYDH2_k127_10289376_8 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 - 2.1.1.192 6.294e-224 695.0
BYDH2_k127_10289376_9 Domain of unknown function (DUF4115) K15539 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001154 605.0
BYDH2_k127_10291329_0 PFAM NAD dependent epimerase dehydratase family K00091 - 1.1.1.219 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006314 477.0
BYDH2_k127_10291329_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001665 464.0
BYDH2_k127_10291329_2 Fungal family of unknown function (DUF1776) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002144 388.0
BYDH2_k127_10291329_3 ATPase MipZ K03496 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001025 357.0
BYDH2_k127_10291329_4 Belongs to the ompA family K03286 - - 0.0000000000000000000000000000000000000000001497 163.0
BYDH2_k127_10291329_5 HTH-like domain K07497 - - 0.000000000000000000000002876 111.0
BYDH2_k127_10291329_6 Domain of unknown function (DUF4105) - - - 0.000000000000005817 80.0
BYDH2_k127_10303091_0 D-isomer specific 2-hydroxyacid dehydrogenase K03778 - 1.1.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005059 355.0
BYDH2_k127_10303091_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000005267 220.0
BYDH2_k127_10303091_2 Domain of unknown function (DUF4156) - - - 0.00000000000000000000000000000000000000000000000009508 179.0
BYDH2_k127_10303091_3 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.0000000000000000000000000000000000000000000001381 170.0
BYDH2_k127_10303091_4 - - - - 0.00000000000002002 74.0
BYDH2_k127_10303091_5 VanZ like family - - - 0.000000000000672 73.0
BYDH2_k127_10303091_6 D-isomer specific 2-hydroxyacid dehydrogenase K03778 - 1.1.1.28 0.00000000003529 66.0
BYDH2_k127_10303091_7 - - - - 0.00000000008004 63.0
BYDH2_k127_10328981_0 GTP-binding protein, HSR1-related - - - 3.26e-292 898.0
BYDH2_k127_10328981_1 Protein of unknown function (DUF2868) - - - 1.837e-287 885.0
BYDH2_k127_10328981_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005955 294.0
BYDH2_k127_10328981_3 PFAM Glutamine amidotransferase class-I K01951 - 6.3.5.2 0.000000000000001592 79.0
BYDH2_k127_10374957_0 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 0.0 1282.0
BYDH2_k127_10374957_1 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 0.0 1152.0
BYDH2_k127_10374957_2 TonB-dependent Receptor Plug Domain K02014 - - 0.0 1146.0
BYDH2_k127_10374957_3 Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions K21071 - 2.7.1.11,2.7.1.90 2.06e-275 847.0
BYDH2_k127_10374957_4 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 3.679e-214 666.0
BYDH2_k127_10374957_5 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.7.4.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007856 419.0
BYDH2_k127_10374957_6 Modulates RecA activity K03565 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002054 253.0
BYDH2_k127_10374957_7 - - - - 0.000000000000000000000000000000000000000000000000000002857 192.0
BYDH2_k127_10374957_8 Ferric uptake regulator family K03711 - - 0.000000000000000000000000000000000000003871 145.0
BYDH2_k127_10374957_9 - - - - 0.000000000000000000000000000000000008748 139.0
BYDH2_k127_10383213_0 Pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 4.057e-222 691.0
BYDH2_k127_10383213_1 Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5- dihydroxy-2-cyclopenten-1-yl) moiety of the queuosine in the wobble position of the QUC anticodon K01894 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007053 357.0
BYDH2_k127_10383213_2 PFAM Polyketide cyclase dehydrase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001228 315.0
BYDH2_k127_10383213_3 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000009705 293.0
BYDH2_k127_10383213_4 - - - - 0.000000000000000000000000000000000000000000000000005905 186.0
BYDH2_k127_10383213_5 Nucleotidyltransferase domain - - - 0.00000000000000000000000000002065 120.0
BYDH2_k127_10413624_0 Belongs to the MIP aquaporin (TC 1.A.8) family K02440 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002909 465.0
BYDH2_k127_10413624_1 COG1629 Outer membrane receptor proteins, mostly Fe transport K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002658 392.0
BYDH2_k127_10413624_2 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004866 295.0
BYDH2_k127_10413624_3 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses - - - 0.0000000000000000000000000000000000000000000000000000001155 203.0
BYDH2_k127_10413624_4 Helicase associated domain (HA2) Add an annotation K03578 - 3.6.4.13 0.0000000000000000000239 90.0
BYDH2_k127_1044431_0 DNA helicase K03654 - 3.6.4.12 0.0 1144.0
BYDH2_k127_1044431_1 TIGRFAM glutamine synthetase, type I K01915,K20712 GO:0003674,GO:0003824,GO:0006725,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0016866,GO:0034022,GO:0042537,GO:0044237,GO:0050486,GO:0071704,GO:1901360 5.4.4.3,6.3.1.2 1.877e-313 960.0
BYDH2_k127_1044431_2 Exodeoxyribonuclease III xth K01142 - 3.1.11.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001644 494.0
BYDH2_k127_1044431_3 nuclear chromosome segregation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005068 391.0
BYDH2_k127_1044431_4 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005461 327.0
BYDH2_k127_1044431_5 Domain of unknown function (DUF4124) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002859 254.0
BYDH2_k127_1044431_6 - - - - 0.0000000000000000000000000000000000000000000000000000000000000518 216.0
BYDH2_k127_1044431_7 nuclear chromosome segregation - - - 0.000000000000000000000000000000000000000001338 164.0
BYDH2_k127_1044431_8 - - - - 0.000000000000000000000000000000008453 126.0
BYDH2_k127_10501754_0 Cysteine-rich domain - - - 7.889e-254 784.0
BYDH2_k127_10501754_1 Ammonium transporter K03320,K06580 - - 5.653e-215 670.0
BYDH2_k127_10501754_2 CNP1-like family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000075 309.0
BYDH2_k127_10510086_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02621 - - 0.0 1417.0
BYDH2_k127_10510086_1 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02622 - - 0.0 1233.0
BYDH2_k127_10510086_2 HDOD domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003394 526.0
BYDH2_k127_10510086_3 OST-HTH/LOTUS domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000186 455.0
BYDH2_k127_10510086_4 Ion transport protein K10716 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001661 353.0
BYDH2_k127_10510086_5 PFAM Transposase, IS4-like K07481 - - 0.000000000000002453 75.0
BYDH2_k127_10510086_6 Transposase - - - 0.00000000000002418 72.0
BYDH2_k127_10520392_0 Haemolysin-type calcium-binding repeat (2 copies) - - - 0.0 2489.0
BYDH2_k127_10520392_1 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 6.09e-315 968.0
BYDH2_k127_10520392_10 - - - - 0.0000002869 55.0
BYDH2_k127_10520392_11 - - - - 0.000003752 49.0
BYDH2_k127_10520392_2 AMP-dependent synthetase - - - 2.307e-303 934.0
BYDH2_k127_10520392_3 TIGRFAM Mannose-1-phosphate guanylyltransferase mannose-6-phosphate isomerase K16011 - 2.7.7.13,5.3.1.8 9.444e-299 918.0
BYDH2_k127_10520392_4 RNase_H superfamily - - - 1.264e-290 894.0
BYDH2_k127_10520392_5 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 1.359e-288 888.0
BYDH2_k127_10520392_6 PFAM Orn DAP Arg decarboxylase 2 K01586 - 4.1.1.20 2.522e-239 742.0
BYDH2_k127_10520392_7 PFAM Metal-dependent phosphohydrolase, HD K01768 - 4.6.1.1 5.022e-218 682.0
BYDH2_k127_10520392_8 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.000000000000000000000000000000000000000000000000000000001042 201.0
BYDH2_k127_10582723_0 PFAM Copper resistance D K07245 - - 0.0 1312.0
BYDH2_k127_10582723_1 PFAM aminotransferase, class I K14267 - 2.6.1.17 5.415e-253 781.0
BYDH2_k127_10582723_10 - - - - 0.0000000000000000000000000000000000000000000000000000000004897 201.0
BYDH2_k127_10582723_11 - - - - 0.0000000000000000000000000000000000000000000000006961 176.0
BYDH2_k127_10582723_12 Protein of unknown function (DUF2909) - - - 0.00000000000000000000000004793 108.0
BYDH2_k127_10582723_14 DDE superfamily endonuclease K07494 - - 0.00000001472 59.0
BYDH2_k127_10582723_15 - - - - 0.00000005289 55.0
BYDH2_k127_10582723_2 HI0933-like protein K07007 - - 7.406e-232 721.0
BYDH2_k127_10582723_3 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 - 2.5.1.75 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001232 578.0
BYDH2_k127_10582723_4 Specifically methylates the adenine in position 2030 of 23S rRNA K07115 - 2.1.1.266 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001086 566.0
BYDH2_k127_10582723_5 Belongs to the transferase hexapeptide repeat family K00674 - 2.3.1.117 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004958 549.0
BYDH2_k127_10582723_6 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005885 440.0
BYDH2_k127_10582723_7 DDE superfamily endonuclease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001945 274.0
BYDH2_k127_10582723_8 Winged helix-turn helix - - - 0.0000000000000000000000000000000000000000000000000000000000000000002526 231.0
BYDH2_k127_10582723_9 BON domain K04065 - - 0.000000000000000000000000000000000000000000000000000000000000905 210.0
BYDH2_k127_1071042_0 Protein of unknown function (DUF1499) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006893 408.0
BYDH2_k127_1071042_1 NUDIX domain K01515 - 3.6.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003415 401.0
BYDH2_k127_1071042_2 Putative Na+/H+ antiporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004737 315.0
BYDH2_k127_1071042_3 Glycine-zipper domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002141 240.0
BYDH2_k127_1071042_4 PFAM Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.000000000000000000000000000000000000000000000000000000000000000000003495 234.0
BYDH2_k127_1071042_5 - - - - 0.0000000000000000000000000000000000003604 141.0
BYDH2_k127_1071042_6 DDE domain - - - 0.000000000000000006146 85.0
BYDH2_k127_10754893_0 protein synthesis factor, GTP-binding K06207 - - 0.0 1189.0
BYDH2_k127_10754893_1 WD40-like Beta Propeller Repeat - - - 6.295e-240 742.0
BYDH2_k127_10754893_2 PFAM Restriction endonuclease, type I, R subunit Type III, Res subunit K01156 - 3.1.21.5 0.0000000000000000000000000000000000000000000000000000000000000000000003922 237.0
BYDH2_k127_10773913_0 PFAM Peptidase M48 K06013 - 3.4.24.84 6.416e-259 799.0
BYDH2_k127_10773913_1 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001404 550.0
BYDH2_k127_10773913_2 3'-to-5' exoribonuclease specific for small oligoribonucleotides K13288 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000115 379.0
BYDH2_k127_10773913_3 TIGRFAM Sodium sulphate symporter K11106,K14445 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002077 286.0
BYDH2_k127_10773913_4 diol metabolic process K01724 - 4.2.1.96 0.0000000000000000000000000000000000000000000000000000000000000000000006663 237.0
BYDH2_k127_10773913_5 EF hand - - - 0.0000000000000000000000000000000000000000000000000000889 192.0
BYDH2_k127_10876992_0 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 - 6.5.1.2 0.0 1300.0
BYDH2_k127_10876992_1 Protein of unknown function (DUF2914) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002317 418.0
BYDH2_k127_10876992_2 Belongs to the peptidase S11 family K01286,K07258 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002335 387.0
BYDH2_k127_10876992_3 Nudix hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001206 372.0
BYDH2_k127_10876992_4 Phosphoribosyl transferase domain K00760 - 2.4.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001115 310.0
BYDH2_k127_10876992_5 Purine nucleoside phosphorylase which is highly specific for 6-oxopurine nucleosides. Cleaves guanosine or inosine to respective bases and sugar-1-phosphate molecules. Involved in purine salvage K00772,K03815 - 2.4.2.28 0.0000000000000000000000000000000000000000000000000001111 186.0
BYDH2_k127_10876992_6 serine-type aminopeptidase activity K14475 - - 0.00000000329 66.0
BYDH2_k127_10905943_0 TonB-dependent Receptor Plug Domain K02014 - - 0.0 1322.0
BYDH2_k127_10905943_1 Glucose / Sorbosone dehydrogenase K21430 - - 1.049e-236 735.0
BYDH2_k127_10905943_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002062 491.0
BYDH2_k127_10905943_3 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 0.0000000000000002373 79.0
BYDH2_k127_10905943_4 RES - - - 0.0000000000000008464 78.0
BYDH2_k127_10905943_7 PFAM Integrase, catalytic core K07497 - - 0.0002427 46.0
BYDH2_k127_10950739_0 Belongs to the GSP D family K02453 - - 0.0 1170.0
BYDH2_k127_10950739_1 type II secretion system protein E K02454 - - 0.0 1083.0
BYDH2_k127_10950739_10 Endoribonuclease L-PSP - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000117 260.0
BYDH2_k127_10950739_11 PFAM type II secretion system protein G K02456 - - 0.000000000000000000000000000000000000000000000000000000000000000000000004135 244.0
BYDH2_k127_10950739_12 DDE superfamily endonuclease - - - 0.000000000000000000000000005997 111.0
BYDH2_k127_10950739_2 DNA polymerase III K01141 - 3.1.11.1 4.432e-284 875.0
BYDH2_k127_10950739_3 Type II secretion system K02455 - - 3.104e-245 758.0
BYDH2_k127_10950739_4 Type II secretory pathway, pseudopilin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001594 380.0
BYDH2_k127_10950739_5 carbon utilization - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002395 350.0
BYDH2_k127_10950739_6 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005777 327.0
BYDH2_k127_10950739_7 Prokaryotic N-terminal methylation motif K02456 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003392 318.0
BYDH2_k127_10950739_8 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001659 302.0
BYDH2_k127_10950739_9 general secretion pathway protein G K02456 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002139 286.0
BYDH2_k127_10952354_0 Multicopper oxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008525 471.0
BYDH2_k127_10952354_1 Signal transduction response regulator, receiver - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000926 422.0
BYDH2_k127_10952354_2 Multicopper oxidase type - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001309 317.0
BYDH2_k127_10952354_3 response regulator - - - 0.0000004005 51.0
BYDH2_k127_10971387_0 peptidase M24B, X-Pro dipeptidase aminopeptidase K01262 - 3.4.11.9 1.309e-278 859.0
BYDH2_k127_10971387_1 Sodium:alanine symporter family K03310 - - 6.84e-278 857.0
BYDH2_k127_10971387_10 PFAM transposase, IS4 family protein - - - 0.000000000000000000000000000006247 119.0
BYDH2_k127_10971387_12 Phosphotransferase enzyme family K07102 - 2.7.1.221 0.000000000000001785 75.0
BYDH2_k127_10971387_13 Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA K03439 - 2.1.1.33 0.000000000001713 70.0
BYDH2_k127_10971387_14 - - - - 0.000000276 54.0
BYDH2_k127_10971387_15 DNA-binding transcription factor activity K10680 - - 0.000006704 49.0
BYDH2_k127_10971387_2 amine dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003935 591.0
BYDH2_k127_10971387_3 nuclease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002151 533.0
BYDH2_k127_10971387_4 Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S K03149 - 2.8.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001651 501.0
BYDH2_k127_10971387_5 Nucleotidyl transferase K00992 - 2.7.7.99 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000159 434.0
BYDH2_k127_10971387_6 Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA K03439 - 2.1.1.33 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001277 398.0
BYDH2_k127_10971387_7 - - - - 0.00000000000000000000000000000000000000000000000000000000000003567 216.0
BYDH2_k127_10971387_8 - K07039 - - 0.0000000000000000000000000000000000008106 139.0
BYDH2_k127_10971387_9 ThiS family K03154 - - 0.00000000000000000000000000000000001296 136.0
BYDH2_k127_11028848_0 Mediates influx of magnesium ions K03284 - - 7.576e-224 695.0
BYDH2_k127_11028848_1 PFAM NAD-dependent epimerase dehydratase K01784 - 5.1.3.2 2.304e-217 676.0
BYDH2_k127_11028848_2 UTP-glucose-1-phosphate uridylyltransferase K00963 - 2.7.7.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006123 573.0
BYDH2_k127_11028848_3 Protein of unknown function VcgC/VcgE (DUF2780) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002486 303.0
BYDH2_k127_11028848_4 - - - - 0.000000000000000000000000000000000006016 136.0
BYDH2_k127_11028848_5 - - - - 0.0000000000000003992 79.0
BYDH2_k127_11028848_6 Cytidylyltransferase-like - - - 0.000003356 49.0
BYDH2_k127_11085677_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K15726 - - 0.0 1801.0
BYDH2_k127_11085677_1 cytochrome C peroxidase - - - 0.0 1313.0
BYDH2_k127_11085677_2 Putative Na+/H+ antiporter - - - 2.763e-261 806.0
BYDH2_k127_11085677_3 outer membrane efflux protein K15725 - - 3.481e-233 725.0
BYDH2_k127_11085677_4 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K15727 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000257 612.0
BYDH2_k127_11097605_0 diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002278 479.0
BYDH2_k127_11097605_1 MotA TolQ ExbB proton channel K03561 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001111 460.0
BYDH2_k127_11097605_10 - - - - 0.0000000001049 64.0
BYDH2_k127_11097605_2 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000234 412.0
BYDH2_k127_11097605_3 Haemolysin-type calcium-binding repeat (2 copies) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003111 278.0
BYDH2_k127_11097605_4 Biopolymer transport protein ExbD TolR K03559 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003385 259.0
BYDH2_k127_11097605_5 RDD family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002377 256.0
BYDH2_k127_11097605_6 Cytidylyltransferase-like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000007542 251.0
BYDH2_k127_11097605_7 2Fe-2S -binding K02192 - - 0.000000000000000000000000000000000004748 138.0
BYDH2_k127_11097605_8 - - - - 0.00000000000002838 72.0
BYDH2_k127_11097605_9 PFAM NAD-dependent glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.000000000001866 68.0
BYDH2_k127_11179682_0 Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily K00121 - 1.1.1.1,1.1.1.284 1.815e-238 737.0
BYDH2_k127_11179682_1 Serine hydrolase involved in the detoxification of formaldehyde K01070 - 3.1.2.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001502 549.0
BYDH2_k127_11179682_2 low molecular weight K01104 GO:0000271,GO:0003674,GO:0003824,GO:0004721,GO:0004725,GO:0005975,GO:0005976,GO:0006464,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009242,GO:0009987,GO:0016051,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019538,GO:0033692,GO:0034637,GO:0034645,GO:0035335,GO:0036211,GO:0042578,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044267,GO:0046377,GO:0071704,GO:0140096,GO:1901135,GO:1901137,GO:1901564,GO:1901576 3.1.3.48 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002523 313.0
BYDH2_k127_11179682_3 restriction endonuclease K07448 GO:0001101,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006725,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009295,GO:0009415,GO:0009628,GO:0009987,GO:0010035,GO:0015666,GO:0016787,GO:0016788,GO:0032067,GO:0034641,GO:0042221,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043590,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051599,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901700 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001186 311.0
BYDH2_k127_11211386_0 Diguanylate cyclase phosphodiesterase with PAS PAC - - - 0.0 1335.0
BYDH2_k127_11211386_1 acetyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003986 609.0
BYDH2_k127_11211386_2 PFAM RIO-like kinase K07178 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001673 540.0
BYDH2_k127_11211386_3 antibiotic catabolic process - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001868 456.0
BYDH2_k127_11211386_4 PEP-CTERM motif - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005342 288.0
BYDH2_k127_11211386_5 Putative quorum-sensing-regulated virulence factor K09954 - - 0.00000000000000000000000000000000000000251 146.0
BYDH2_k127_11212790_0 ABC transporter K02021,K11085 - - 6.874e-280 869.0
BYDH2_k127_11212790_1 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 4.462e-268 827.0
BYDH2_k127_11212790_2 Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis K00973 - 2.7.7.24 1.565e-195 611.0
BYDH2_k127_11212790_3 Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose K01790 - 5.1.3.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003882 357.0
BYDH2_k127_11212790_4 WYL domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003778 354.0
BYDH2_k127_11212790_5 - K07039 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002214 267.0
BYDH2_k127_11212790_6 HIRAN - - - 0.000000000000000000005881 96.0
BYDH2_k127_11234185_0 Pyruvate kinase, barrel domain K00873 - 2.7.1.40 0.0 1059.0
BYDH2_k127_11234185_1 domain, Protein - - - 1.325e-310 956.0
BYDH2_k127_11234185_10 Esterase-like activity of phytase - - - 0.000000000000000000000000000000000000000000000000000005375 191.0
BYDH2_k127_11234185_11 - - - - 0.0000000000000000000000000000000001892 133.0
BYDH2_k127_11234185_2 Part of the ABC transporter complex PstSACB involved in phosphate import K02040 - - 8.305e-216 671.0
BYDH2_k127_11234185_3 probably responsible for the translocation of the substrate across the membrane K02037 - - 2.548e-194 607.0
BYDH2_k127_11234185_4 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009664 552.0
BYDH2_k127_11234185_5 PFAM binding-protein-dependent transport systems inner membrane component K02038 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005591 541.0
BYDH2_k127_11234185_6 Sodium Bile acid symporter family K03453 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000764 491.0
BYDH2_k127_11234185_7 PFAM TonB-dependent receptor, beta-barrel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003678 318.0
BYDH2_k127_11234185_8 Esterase-like activity of phytase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000006161 259.0
BYDH2_k127_11234185_9 Sulfotransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002885 255.0
BYDH2_k127_1213050_0 Required for chromosome condensation and partitioning K03529 - - 0.0 1882.0
BYDH2_k127_1213050_1 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 0.0 1377.0
BYDH2_k127_1213050_10 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis K00560 - 2.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001452 525.0
BYDH2_k127_1213050_11 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004994 482.0
BYDH2_k127_1213050_12 membrane transporter protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002909 480.0
BYDH2_k127_1213050_13 COG0526, thiol-disulfide isomerase and thioredoxins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002684 420.0
BYDH2_k127_1213050_14 Belongs to the dCTP deaminase family K01494 - 3.5.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002602 400.0
BYDH2_k127_1213050_15 phosphatase activity K01560,K07025,K20866,K21063 GO:0003674,GO:0003824,GO:0006766,GO:0006767,GO:0006771,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042578,GO:0042726,GO:0042727,GO:0043726,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 3.1.3.10,3.1.3.104,3.8.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001699 382.0
BYDH2_k127_1213050_16 depolymerase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008667 374.0
BYDH2_k127_1213050_17 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis K00287 - 1.5.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002397 319.0
BYDH2_k127_1213050_18 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) K09457 - 1.7.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003265 282.0
BYDH2_k127_1213050_19 EVE domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001162 282.0
BYDH2_k127_1213050_2 PFAM Peptidase M17, leucyl aminopeptidase K01255 - 3.4.11.1 1.077e-302 930.0
BYDH2_k127_1213050_20 Domain of unknown function (DUF4440) - - - 0.0000000000000000000000000000000000000000000000000000000000004403 212.0
BYDH2_k127_1213050_21 - - - - 0.00000000000000000000000000000000000000000000000000000000006061 205.0
BYDH2_k127_1213050_22 Iron-binding zinc finger CDGSH type - - - 0.0000000000000000000000000000000000000000000000001058 177.0
BYDH2_k127_1213050_23 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.000000000000000000000000000000000000000000000002162 174.0
BYDH2_k127_1213050_24 Type I restriction modification DNA specificity domain K01154 - 3.1.21.3 0.0000000000000000000000000000002704 126.0
BYDH2_k127_1213050_25 ParD-like antitoxin of type II bacterial toxin-antitoxin system - - - 0.0000000000000000000004966 96.0
BYDH2_k127_1213050_26 ParE-like toxin of type II bacterial toxin-antitoxin system - - - 0.00000000000003656 73.0
BYDH2_k127_1213050_27 ParE-like toxin of type II bacterial toxin-antitoxin system - - - 0.0000000000512 65.0
BYDH2_k127_1213050_28 PFAM NAD-dependent glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.00000002248 56.0
BYDH2_k127_1213050_3 Putative exonuclease SbcCD, C subunit - - - 6.146e-296 916.0
BYDH2_k127_1213050_4 Lysin motif K08307 - - 2.85e-258 798.0
BYDH2_k127_1213050_5 Belongs to the Orn Lys Arg decarboxylase class-II family K01581 - 4.1.1.17 1.001e-257 794.0
BYDH2_k127_1213050_6 TIGRFAM TIGR03790 family protein - - - 1.28e-241 754.0
BYDH2_k127_1213050_7 Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins - - - 2.043e-237 736.0
BYDH2_k127_1213050_8 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 3.558e-222 692.0
BYDH2_k127_1213050_9 Uncharacterized protein conserved in bacteria N-term (DUF3322) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001283 567.0
BYDH2_k127_1273945_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1520.0
BYDH2_k127_1273945_1 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 - - 1.612e-272 839.0
BYDH2_k127_1273945_2 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 2.075e-245 762.0
BYDH2_k127_1273945_3 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 1.15e-215 671.0
BYDH2_k127_1273945_4 PFAM Endonuclease exonuclease phosphatase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000025 520.0
BYDH2_k127_1273945_5 Short-chain dehydrogenase reductase SDR - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004522 476.0
BYDH2_k127_1273945_6 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003415 416.0
BYDH2_k127_1273945_7 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995 - 2.7.8.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001183 339.0
BYDH2_k127_1273945_8 CDP-archaeol synthase K19664 - 2.7.7.67 0.00000001832 56.0
BYDH2_k127_1273945_9 - - - - 0.000007581 49.0
BYDH2_k127_1279542_0 DHH family K07462 - - 3.342e-286 880.0
BYDH2_k127_1279542_1 PFAM MgtC SapB transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004674 511.0
BYDH2_k127_1279542_2 TRAP transporter T-component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001196 505.0
BYDH2_k127_1279542_3 Phosphoglycerate mutase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001434 405.0
BYDH2_k127_1279542_4 PIN domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000514 258.0
BYDH2_k127_1279542_5 Antitoxin Phd_YefM, type II toxin-antitoxin system - - - 0.000132 48.0
BYDH2_k127_1355878_0 TIGRFAM type I secretion outer membrane protein, TolC K12538 - - 5.082e-260 804.0
BYDH2_k127_1355878_2 TIGRFAM Type I secretion membrane fusion protein, HlyD K02022,K12537,K12542 - - 0.000000000000000000000000000000000000000000000001736 173.0
BYDH2_k127_1355878_3 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 0.000000000000000000000000002211 113.0
BYDH2_k127_1359652_0 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 0.0 1174.0
BYDH2_k127_1359652_1 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 4.664e-260 805.0
BYDH2_k127_1359652_2 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.0000000000000000000000000000000000000007817 148.0
BYDH2_k127_1359652_3 DDE superfamily endonuclease - - - 0.00000000000007322 76.0
BYDH2_k127_1359652_4 DDE superfamily endonuclease - - - 0.00000000002511 64.0
BYDH2_k127_1359652_5 DNA polymerase III K01141 - 3.1.11.1 0.000000000146 62.0
BYDH2_k127_1359652_6 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.0000000009741 60.0
BYDH2_k127_1359652_7 DDE superfamily endonuclease - - - 0.00001323 47.0
BYDH2_k127_1359652_8 Winged helix-turn helix - - - 0.0002036 47.0
BYDH2_k127_1381382_0 dehydrogenase, E1 component K00164 - 1.2.4.2 0.0 1686.0
BYDH2_k127_1381382_1 Threonine synthase K01733 - 4.2.3.1 5.674e-292 898.0
BYDH2_k127_1381382_2 Belongs to the citrate synthase family K01647 - 2.3.3.1 2.735e-285 877.0
BYDH2_k127_1381382_3 homoserine dehydrogenase K00003 - 1.1.1.3 3.637e-259 801.0
BYDH2_k127_1381382_4 The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) K00658 - 2.3.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004295 573.0
BYDH2_k127_1381382_5 succinate dehydrogenase fumarate reductase K00240 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009060,GO:0009987,GO:0015980,GO:0016020,GO:0016491,GO:0022900,GO:0022904,GO:0044237,GO:0044464,GO:0045333,GO:0048037,GO:0051536,GO:0051537,GO:0051538,GO:0051539,GO:0051540,GO:0055114,GO:0071944 1.3.5.1,1.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001317 482.0
BYDH2_k127_1381382_6 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003081 425.0
BYDH2_k127_1381382_7 PFAM aminotransferase, class I K14260 - 2.6.1.2,2.6.1.66 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003036 297.0
BYDH2_k127_1381382_8 endonuclease activity - - - 0.00000000000000000000000000000000000000000000000004178 179.0
BYDH2_k127_1381382_9 Flavinator of succinate dehydrogenase K09159 - - 0.000000000000000000000000000000000000000008699 154.0
BYDH2_k127_1385184_0 Double sensory domain of two-component sensor kinase - - - 0.0 1797.0
BYDH2_k127_1385184_1 Beta-Casp domain K07576 - - 1.873e-296 910.0
BYDH2_k127_1385184_2 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 4.036e-285 878.0
BYDH2_k127_1385184_3 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00833 - 2.6.1.62 2.189e-283 872.0
BYDH2_k127_1385184_4 Protein of unknown function (DUF3422) - - - 9.461e-258 798.0
BYDH2_k127_1385184_5 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - 1.161e-225 706.0
BYDH2_k127_1385184_6 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.00000000000000000000000000000000000000000006194 161.0
BYDH2_k127_1493415_0 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 2.998e-319 979.0
BYDH2_k127_1493415_1 TIGRFAM Ubiquinone biosynthesis hydroxylase, UbiH UbiF VisC COQ6 K03185 - - 3.441e-234 727.0
BYDH2_k127_1493415_2 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05540 - - 3.448e-208 648.0
BYDH2_k127_1493415_3 Belongs to the GARS family K01945 - 6.3.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001957 521.0
BYDH2_k127_1493415_4 Belongs to the transcriptional regulatory Fis family K03557 - - 0.0000000000000000000000000000000000000000008165 156.0
BYDH2_k127_1521697_0 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation K00549 - 2.1.1.14 0.0 1494.0
BYDH2_k127_1521697_1 Bacterial regulatory helix-turn-helix protein, lysR family K03576 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006284 564.0
BYDH2_k127_1521697_2 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 - 2.1.1.297 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000116 319.0
BYDH2_k127_1521697_3 Transposase IS200 like K07491 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001153 291.0
BYDH2_k127_1521697_4 membrane - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003746 272.0
BYDH2_k127_1521697_5 Belongs to the glutaredoxin family. Monothiol subfamily K07390 - - 0.00000000000000000000000000000000000000000000000000000000000003936 214.0
BYDH2_k127_1521697_6 SIR2-like domain - - - 0.00000000000000000000000000000000000000000001748 163.0
BYDH2_k127_1521697_7 PFAM TENA THI-4 protein Coenzyme PQQ biosynthesis protein C K06137 - 1.3.3.11 0.000000000000000000000000000001347 120.0
BYDH2_k127_1521697_8 NAD+ binding - - - 0.000000131 54.0
BYDH2_k127_1639563_0 ABC transporter K06020 - 3.6.3.25 0.0 1004.0
BYDH2_k127_1639563_1 Belongs to the pseudouridine synthase RsuA family K06182 - 5.4.99.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007475 456.0
BYDH2_k127_1639563_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003862 373.0
BYDH2_k127_1639563_3 Rhodanese Homology Domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003399 280.0
BYDH2_k127_1639563_5 Protein of unknown function (DUF2835) - - - 0.0000000000000000000000000000000000001786 141.0
BYDH2_k127_1639563_6 Peptidase M4 - - - 0.00000000000000000000000000001035 118.0
BYDH2_k127_1658012_0 Histidine kinase K20974 - 2.7.13.3 0.0 1457.0
BYDH2_k127_1658012_1 Putative diguanylate phosphodiesterase - - - 7.919e-209 655.0
BYDH2_k127_1658012_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005835 351.0
BYDH2_k127_1658012_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000001815 231.0
BYDH2_k127_1719604_0 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 0.0 1201.0
BYDH2_k127_1719604_1 lipid kinase activity - - - 0.0 1173.0
BYDH2_k127_1719604_10 Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the phosphoenolpyruvate synthase (PEPS) by catalyzing its phosphorylation dephosphorylation K09773 - 2.7.11.33,2.7.4.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008724 532.0
BYDH2_k127_1719604_11 Converts GTP to 7,8-dihydroneopterin triphosphate K09007 - 3.5.4.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005857 528.0
BYDH2_k127_1719604_12 MobA-like NTP transferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002557 510.0
BYDH2_k127_1719604_13 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002488 494.0
BYDH2_k127_1719604_14 MotA/TolQ/ExbB proton channel family K03561 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006115 413.0
BYDH2_k127_1719604_15 PFAM Glycoside hydrolase, family 19, catalytic K03791 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003689 369.0
BYDH2_k127_1719604_16 Protein of unknown function (DUF2959) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001719 357.0
BYDH2_k127_1719604_17 YaeQ - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009186 348.0
BYDH2_k127_1719604_18 Belongs to the ompA family K03286 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003255 339.0
BYDH2_k127_1719604_19 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009657 308.0
BYDH2_k127_1719604_2 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 - - 0.0 1120.0
BYDH2_k127_1719604_20 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001383 283.0
BYDH2_k127_1719604_21 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004811 273.0
BYDH2_k127_1719604_22 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001724 248.0
BYDH2_k127_1719604_23 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.00000000000000000000000000000000000000000000000000000002905 201.0
BYDH2_k127_1719604_24 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007 - 2.7.9.2 0.00000000000000000000000000000000000001242 144.0
BYDH2_k127_1719604_25 Universal stress protein family - - - 0.000000000000000000000000000000001345 134.0
BYDH2_k127_1719604_26 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.0000000000000002615 82.0
BYDH2_k127_1719604_27 Biopolymer transport protein ExbD/TolR K03559 - - 0.00000000002752 69.0
BYDH2_k127_1719604_3 Belongs to the CDP-alcohol phosphatidyltransferase class-I family - - - 5.314e-264 814.0
BYDH2_k127_1719604_4 Sulfate permease family - - - 1.999e-235 734.0
BYDH2_k127_1719604_5 acetyltransferase - - - 2.554e-224 699.0
BYDH2_k127_1719604_6 PFAM Permease YjgP YjgQ K07091 - - 4.503e-204 638.0
BYDH2_k127_1719604_7 PFAM Permease YjgP YjgQ K11720 - - 7.548e-204 639.0
BYDH2_k127_1719604_8 Belongs to the FPP GGPP synthase family K00795 - 2.5.1.1,2.5.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000452 554.0
BYDH2_k127_1719604_9 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005983 541.0
BYDH2_k127_1721693_0 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 5.509e-225 700.0
BYDH2_k127_1721693_1 Belongs to the UPF0758 family K03630 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001261 427.0
BYDH2_k127_1721693_2 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA K01520 - 3.6.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001837 291.0
BYDH2_k127_1721693_3 Belongs to the bacterial ribosomal protein bL28 family K02902 - - 0.000000000000000000000000000000000000000002626 156.0
BYDH2_k127_1721693_4 Belongs to the bacterial ribosomal protein bL33 family K02913 - - 0.0000000000000000000000008275 103.0
BYDH2_k127_1848807_0 UvrD REP K03657 - 3.6.4.12 0.0 1388.0
BYDH2_k127_1848807_1 Belongs to the sulfur carrier protein TusA family - - - 1.867e-236 734.0
BYDH2_k127_1848807_10 Alpha amylase, catalytic domain K01176 - 3.2.1.1 0.000000000000000000000000000000000000000000000000000002498 190.0
BYDH2_k127_1848807_2 Uncharacterized conserved protein (DUF2278) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006341 597.0
BYDH2_k127_1848807_3 PFAM Phosphoribulokinase uridine kinase K00855 - 2.7.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003365 571.0
BYDH2_k127_1848807_4 ABC transporter, phosphonate, periplasmic substrate-binding protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008686 554.0
BYDH2_k127_1848807_5 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004849 347.0
BYDH2_k127_1848807_6 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004883 318.0
BYDH2_k127_1848807_7 Glycine-zipper domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001545 297.0
BYDH2_k127_1848807_8 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005933 263.0
BYDH2_k127_1848807_9 - - - - 0.00000000000000000000000000000000000000000000000000000000000003404 216.0
BYDH2_k127_1849813_0 Catalyzes cross-linking of the peptidoglycan cell wall at the division septum K03587 - 3.4.16.4 0.0 1115.0
BYDH2_k127_1849813_1 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 5.825e-307 944.0
BYDH2_k127_1849813_10 Cell wall formation K01921 - 6.3.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002951 580.0
BYDH2_k127_1849813_11 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 - 2.1.1.199 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001133 573.0
BYDH2_k127_1849813_12 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009709 505.0
BYDH2_k127_1849813_13 PFAM Nucleotidyl transferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002832 488.0
BYDH2_k127_1849813_14 Cell wall formation K00075 - 1.3.1.98 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000116 453.0
BYDH2_k127_1849813_15 endonuclease III K01247 - 3.2.2.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009959 439.0
BYDH2_k127_1849813_16 Belongs to the MraZ family K03925 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004767 297.0
BYDH2_k127_1849813_17 Histidine triad (HIT) protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002255 280.0
BYDH2_k127_1849813_18 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic K03586 - - 0.0000000000000000000000000000000000000000000000000003243 185.0
BYDH2_k127_1849813_19 POTRA domain, FtsQ-type - - - 0.000000000000000000000000000000000000006271 155.0
BYDH2_k127_1849813_2 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 4.393e-302 929.0
BYDH2_k127_1849813_20 Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily K01834 - 5.4.2.11 0.000000000000000000000000000000000001527 139.0
BYDH2_k127_1849813_21 Domain of unknown function (DUF4276) - - - 0.0000000000000002255 79.0
BYDH2_k127_1849813_3 Belongs to the MurCDEF family K01924 - 6.3.2.8 6.501e-293 900.0
BYDH2_k127_1849813_4 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929,K15792 - 6.3.2.10,6.3.2.13 4.696e-269 832.0
BYDH2_k127_1849813_5 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 3.962e-263 811.0
BYDH2_k127_1849813_6 Peptidoglycan polymerase that is essential for cell division K03588 - - 6.843e-232 719.0
BYDH2_k127_1849813_7 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 1.166e-230 716.0
BYDH2_k127_1849813_8 PFAM Aminotransferase, class V K04487 - 2.8.1.7 1.057e-229 713.0
BYDH2_k127_1849813_9 fatty acid desaturase - - - 1.532e-217 676.0
BYDH2_k127_1851032_0 type II secretion system protein E K02454 - - 8.92e-243 751.0
BYDH2_k127_1851032_1 Belongs to the N-Me-Phe pilin family K02650 - - 0.000000000000000000000000000000000000000000000000000000000152 206.0
BYDH2_k127_1851032_2 RelE-like toxin of type II toxin-antitoxin system HigB K07334 - - 0.000000000000000000000000000000000000000000000009281 175.0
BYDH2_k127_1851032_3 Protein of unknown function (DUF2442) - - - 0.0000000000000000000000000000000000000000000147 163.0
BYDH2_k127_1851032_4 addiction module antidote protein HigA K21498 - - 0.000000000000000000000000000000000000000000855 158.0
BYDH2_k127_1851032_5 Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell K00982 - 2.7.7.42,2.7.7.89 0.0000000000000000000000000000007144 121.0
BYDH2_k127_1951094_0 Response regulator receiver K02487,K03407,K06596 - 2.7.13.3 0.0 1495.0
BYDH2_k127_1951094_1 PFAM chemotaxis K02660 - - 0.0 1197.0
BYDH2_k127_1951094_2 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 GO:0006082,GO:0006520,GO:0006566,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009987,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0071704,GO:1901564,GO:1901605 4.3.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003806 385.0
BYDH2_k127_1979581_0 PFAM Magnesium chelatase, ChlI subunit K07391 - - 1.815e-296 914.0
BYDH2_k127_1979581_1 Membrane fusogenic activity K09806 - - 0.00000000000000000000000000000000000000000000374 166.0
BYDH2_k127_1979581_2 Phosphotransferase enzyme family K07102 - 2.7.1.221 0.000000000000000000000000000000001312 129.0
BYDH2_k127_1996410_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.0 1661.0
BYDH2_k127_1996410_1 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.0 1158.0
BYDH2_k127_1996410_10 Prephenate dehydrogenase K04517 - 1.3.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005977 505.0
BYDH2_k127_1996410_11 PFAM Peptidase S11, D-alanyl-D-alanine carboxypeptidase A K01286,K07258 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004474 468.0
BYDH2_k127_1996410_12 FecR protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001773 329.0
BYDH2_k127_1996410_13 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003061 301.0
BYDH2_k127_1996410_14 Belongs to the UPF0234 family K09767 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006193 289.0
BYDH2_k127_1996410_15 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001189 239.0
BYDH2_k127_1996410_2 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 - 6.3.4.5 4.594e-265 816.0
BYDH2_k127_1996410_3 D-isomer specific 2-hydroxyacid dehydrogenase K00058 - 1.1.1.399,1.1.1.95 3.895e-244 756.0
BYDH2_k127_1996410_4 PFAM aminotransferase class-III K00821 - 2.6.1.11,2.6.1.17 3.002e-240 744.0
BYDH2_k127_1996410_5 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 3.48e-232 720.0
BYDH2_k127_1996410_6 NeuB family K03856 - 2.5.1.54 5.289e-217 674.0
BYDH2_k127_1996410_7 Prephenate dehydratase K01713,K14170 - 4.2.1.51,4.2.1.91,5.4.99.5 7.82e-211 657.0
BYDH2_k127_1996410_8 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 GO:0000050,GO:0003674,GO:0003824,GO:0004585,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0016743,GO:0019627,GO:0019752,GO:0034641,GO:0042450,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.3.3 3.146e-194 606.0
BYDH2_k127_1996410_9 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine K00831 - 2.6.1.52 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002173 530.0
BYDH2_k127_2009472_0 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903,K14067 - 6.2.1.5,6.2.1.9 4.458e-242 751.0
BYDH2_k127_2009472_1 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902,K08692 GO:0003674,GO:0003824,GO:0004774,GO:0004776,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0016874,GO:0016877,GO:0016878,GO:0031974,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0070013 6.2.1.5,6.2.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004371 579.0
BYDH2_k127_2009472_2 DNA mismatch repair protein MutS - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001996 377.0
BYDH2_k127_2009472_3 PFAM Peptidase S13, D-Ala-D-Ala carboxypeptidase C K07259 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005326 297.0
BYDH2_k127_2009472_4 Protein of unknown function (DUF2971) - - - 0.000000000000000000000000000000000000000000000000000000000000000001112 236.0
BYDH2_k127_2009472_5 - - - - 0.00000000000000000000000000000000000000000000000000000000000001765 215.0
BYDH2_k127_2009472_6 BrnA antitoxin of type II toxin-antitoxin system - - - 0.000000000001045 68.0
BYDH2_k127_2014361_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 - - 0.0 1192.0
BYDH2_k127_2014361_1 Belongs to the 'phage' integrase family - - - 9.185e-236 733.0
BYDH2_k127_2014361_10 Transcriptional regulator - - - 0.00000000000000000000000000000000000000001027 153.0
BYDH2_k127_2014361_11 - - - - 0.000000000000000000000000003135 121.0
BYDH2_k127_2014361_12 - - - - 0.0000000000000000009049 89.0
BYDH2_k127_2014361_13 - - - - 0.0000000000000001658 79.0
BYDH2_k127_2014361_15 - - - - 0.00000002288 64.0
BYDH2_k127_2014361_2 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 1.252e-232 720.0
BYDH2_k127_2014361_3 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 GO:0002097,GO:0002099,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016853,GO:0018130,GO:0019438,GO:0034404,GO:0034470,GO:0034641,GO:0034654,GO:0034660,GO:0042455,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0051075,GO:0055086,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.99.17 3.188e-207 646.0
BYDH2_k127_2014361_4 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002447 555.0
BYDH2_k127_2014361_5 Plasmid recombination enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007846 421.0
BYDH2_k127_2014361_6 SNARE associated Golgi protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002779 364.0
BYDH2_k127_2014361_7 Preprotein translocase subunit K03210 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003542 252.0
BYDH2_k127_2014361_8 - - - - 0.000000000000000000000000000000000000000000000000000000000000000001282 235.0
BYDH2_k127_2014361_9 Helix-turn-helix domain - - - 0.0000000000000000000000000000000000000000000704 164.0
BYDH2_k127_2018470_0 Major facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003224 433.0
BYDH2_k127_2018470_1 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001676 336.0
BYDH2_k127_2018470_2 membrane - - - 0.000000000000000000000000000000000000000000000000000000000000000001703 235.0
BYDH2_k127_2024479_0 Aconitase C-terminal domain K01681 - 4.2.1.3 0.0 1745.0
BYDH2_k127_2024479_1 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 0.0 1352.0
BYDH2_k127_2024479_10 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008153 578.0
BYDH2_k127_2024479_11 PFAM Signal transduction response regulator, receiver K07660 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004872 437.0
BYDH2_k127_2024479_12 Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters K06204 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002111 280.0
BYDH2_k127_2024479_13 Domain of unknown function (DUF4124) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001646 256.0
BYDH2_k127_2024479_14 Small metal-binding protein - - - 0.00000000000000000000000000000000000000000000000000000004088 199.0
BYDH2_k127_2024479_15 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 - - 0.000000000000000000000000000000000000000000000002501 173.0
BYDH2_k127_2024479_16 peptidase - - - 0.00000000000000000000000000000000000000000000001131 171.0
BYDH2_k127_2024479_17 WD40-like Beta Propeller Repeat - - - 0.00000000000000000000000000000000000000000000009019 168.0
BYDH2_k127_2024479_18 membrane - - - 0.000000000000000000000000000000000000000000008462 163.0
BYDH2_k127_2024479_19 - - - - 0.0000000000000000000000000000000000000000004491 161.0
BYDH2_k127_2024479_2 Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes - - - 0.0 1239.0
BYDH2_k127_2024479_20 - - - - 0.000000000000000002635 89.0
BYDH2_k127_2024479_21 - - - - 0.00000001195 56.0
BYDH2_k127_2024479_22 - - - - 0.000004884 52.0
BYDH2_k127_2024479_23 - - - - 0.00001208 48.0
BYDH2_k127_2024479_24 TIGRFAM phosphate binding protein K02040 - - 0.0003703 43.0
BYDH2_k127_2024479_3 Phosphate-selective porin O and P K07221 - - 3.106e-318 979.0
BYDH2_k127_2024479_4 May be involved in recombinational repair of damaged DNA K03631 - - 1.285e-310 958.0
BYDH2_k127_2024479_5 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 5.64e-299 920.0
BYDH2_k127_2024479_6 Signal transduction histidine kinase K07637 - 2.7.13.3 4.085e-265 820.0
BYDH2_k127_2024479_7 Catalyzes the ferrous insertion into protoporphyrin IX K01772 - 4.99.1.1,4.99.1.9 5.752e-231 715.0
BYDH2_k127_2024479_8 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 1.305e-204 638.0
BYDH2_k127_2024479_9 Tfp pilus assembly protein FimV - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008284 607.0
BYDH2_k127_2037463_0 PFAM formate nitrite transporter K02598,K21993 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002534 505.0
BYDH2_k127_2037463_1 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001212 386.0
BYDH2_k127_2037463_2 Involved in the biosynthesis of porphyrin-containing compound - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000139 385.0
BYDH2_k127_2070052_0 PFAM Multicopper oxidase, type K04753,K08100,K14588 - 1.3.3.5 0.0 1000.0
BYDH2_k127_2070052_1 PFAM Peptidase S1 S6, chymotrypsin Hap K08070 - 1.3.1.74 1.156e-240 745.0
BYDH2_k127_2070052_2 Bacterial protein of unknown function (DUF839) K07093 - - 3.757e-227 707.0
BYDH2_k127_2070052_3 Putative aminopeptidase - - - 2.045e-205 642.0
BYDH2_k127_2070052_4 PFAM heat shock protein DnaJ K05516 - - 2.055e-196 613.0
BYDH2_k127_2070052_5 Thioredoxin-like domain K03671,K03672 - 1.8.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002039 286.0
BYDH2_k127_2070052_6 Protein of unknown function (DUF3579) - - - 0.00000000000000000000000000000000000000000000000000000000000009076 214.0
BYDH2_k127_2070052_7 - - - - 0.00000000000000000000000000000000000000000000000000000006836 196.0
BYDH2_k127_2070052_8 MerR HTH family regulatory protein K18997 - - 0.000000000000000000000000000000000000000000000000000003116 191.0
BYDH2_k127_2070052_9 - - - - 0.0000000000000000000000000000000000000000000000000001474 188.0
BYDH2_k127_2151305_0 Diguanylate cyclase phosphodiesterase with PAS PAC - - - 0.0 1701.0
BYDH2_k127_2151305_1 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 0.0 1461.0
BYDH2_k127_2151305_10 Essential for recycling GMP and indirectly, cGMP K00942 - 2.7.4.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004181 384.0
BYDH2_k127_2151305_11 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002739 304.0
BYDH2_k127_2151305_12 Uncharacterized ACR, COG1430 K09005 - - 0.00000000000000000000000000000000000000000000000006002 181.0
BYDH2_k127_2151305_13 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 - 2.7.7.6 0.000000000000000000000000000000000006109 137.0
BYDH2_k127_2151305_2 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K01139 - 2.7.6.5,3.1.7.2 0.0 1344.0
BYDH2_k127_2151305_3 Arginyl-tRNA synthetase K01887 - 6.1.1.19 0.0 1129.0
BYDH2_k127_2151305_4 PFAM Metal-dependent hydrolase HDOD - - - 1.612e-297 918.0
BYDH2_k127_2151305_5 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03106 - 3.6.5.4 1.036e-269 832.0
BYDH2_k127_2151305_6 PFAM Cytochrome c assembly protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003323 539.0
BYDH2_k127_2151305_7 Specifically methylates the ribose of guanosine 2251 in 23S rRNA K03218 - 2.1.1.185 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002106 469.0
BYDH2_k127_2151305_8 Sporulation related domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001529 434.0
BYDH2_k127_2151305_9 Thiol disulfide interchange protein K03673 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004894 392.0
BYDH2_k127_2203423_0 Enoyl-CoA hydratase isomerase K19640 - - 0.0 1102.0
BYDH2_k127_2203423_1 Hydrogenase formation hypA family K04654 - - 4.924e-243 751.0
BYDH2_k127_2203423_10 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 0.000007298 50.0
BYDH2_k127_2203423_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000366 538.0
BYDH2_k127_2203423_3 Putative MetA-pathway of phenol degradation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005653 413.0
BYDH2_k127_2203423_4 L,D-transpeptidase catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008281 353.0
BYDH2_k127_2203423_5 hydrogenase expression formation protein HypE K04655 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002493 327.0
BYDH2_k127_2203423_6 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006095 279.0
BYDH2_k127_2203423_7 Belongs to the universal stress protein A family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000014 261.0
BYDH2_k127_2203423_8 Hydrogenase assembly chaperone hypC hupF K04653 - - 0.000000000000000000000000000000002331 130.0
BYDH2_k127_2203423_9 Alanine-zipper, major outer membrane lipoprotein K06078 - - 0.00000000000000000001407 92.0
BYDH2_k127_2245480_0 Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis K03688 - - 1.926e-314 963.0
BYDH2_k127_2245480_1 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 1.076e-307 944.0
BYDH2_k127_2245480_2 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 4.628e-301 927.0
BYDH2_k127_2245480_3 cell shape determining protein, MreB Mrl K03569 - - 1.6e-219 683.0
BYDH2_k127_2245480_4 protein conserved in bacteria K03690 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011 363.0
BYDH2_k127_2245480_5 Involved in formation and maintenance of cell shape K03570 - - 0.000000000000000000000000000000000000000000000000000000000000000001707 228.0
BYDH2_k127_2245480_6 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.000000000000000000000000000000000000000000000002565 173.0
BYDH2_k127_2245480_7 Subunit R is required for both nuclease and ATPase activities, but not for modification K01153 - 3.1.21.3 0.000006558 49.0
BYDH2_k127_2245480_8 Subunit R is required for both nuclease and ATPase activities, but not for modification K01153 - 3.1.21.3 0.00001655 49.0
BYDH2_k127_2312968_0 Flagellar basal body rod FlgEFG protein C-terminal K02396 - - 1.239e-265 824.0
BYDH2_k127_2312968_1 Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues K01299 - 3.4.17.19 8.762e-222 687.0
BYDH2_k127_2312968_10 Required for flagellar hook formation. May act as a scaffolding protein K02389 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001372 373.0
BYDH2_k127_2312968_11 Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body K02387 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002541 259.0
BYDH2_k127_2312968_12 Belongs to the flagella basal body rod proteins family K02388 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004835 247.0
BYDH2_k127_2312968_13 Protein of unknown function (DUF498/DUF598) - - - 0.0000000000000000000000000000000000000000000000000000000000000000001364 231.0
BYDH2_k127_2312968_14 - - - - 0.0000000000000000000000000000000000000005419 148.0
BYDH2_k127_2312968_15 Phosphopantetheine attachment site - - - 0.000000000000000000000000000000000000002787 147.0
BYDH2_k127_2312968_2 Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation K02394 - - 4.012e-217 676.0
BYDH2_k127_2312968_3 Rod binding protein K02395 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003972 596.0
BYDH2_k127_2312968_4 Flagellar basal body rod protein K02390 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004675 547.0
BYDH2_k127_2312968_5 Beta-lactamase enzyme family K07262 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008467 503.0
BYDH2_k127_2312968_6 Belongs to the flagella basal body rod proteins family K02391 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003039 447.0
BYDH2_k127_2312968_7 Belongs to the flagella basal body rod proteins family K02392 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003522 442.0
BYDH2_k127_2312968_8 Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P-ring assembly K02386 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003222 427.0
BYDH2_k127_2312968_9 Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation K02393 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007685 412.0
BYDH2_k127_2343089_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009572 532.0
BYDH2_k127_2343089_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001507 285.0
BYDH2_k127_2343089_2 Activator of Hsp90 ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004735 245.0
BYDH2_k127_2343089_3 peptidase - - - 0.000000000000000000000000000002037 121.0
BYDH2_k127_2343089_4 Alpha/beta hydrolase family - - - 0.0000000007844 62.0
BYDH2_k127_2352488_0 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 1.916e-241 747.0
BYDH2_k127_2352488_1 Sodium:dicarboxylate symporter family K11102 - - 5.334e-236 733.0
BYDH2_k127_2352488_10 Haem-degrading - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008258 334.0
BYDH2_k127_2352488_11 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 - 2.7.4.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008821 300.0
BYDH2_k127_2352488_12 DNA-binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005151 242.0
BYDH2_k127_2352488_13 PFAM Metal-dependent phosphohydrolase, HD K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000001047 188.0
BYDH2_k127_2352488_14 BrnA antitoxin of type II toxin-antitoxin system - - - 0.00000000000000000000000000000000000000000000000008394 182.0
BYDH2_k127_2352488_15 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system K09803 - - 0.0000000000000006559 81.0
BYDH2_k127_2352488_17 Prokaryotic dksA/traR C4-type zinc finger - - - 0.0000000002477 63.0
BYDH2_k127_2352488_2 TIGRFAM DNA polymerase III, delta prime subunit K02341 - 2.7.7.7 1.274e-211 659.0
BYDH2_k127_2352488_20 PFAM Integrase, catalytic core K07497 - - 0.0000171 48.0
BYDH2_k127_2352488_3 Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen-IX K00228 GO:0003674,GO:0005488,GO:0005515,GO:0042802,GO:0042803,GO:0046983 1.3.3.3 4.203e-205 638.0
BYDH2_k127_2352488_4 Belongs to the glucose-6-phosphate 1-epimerase family K01792 - 5.1.3.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000428 588.0
BYDH2_k127_2352488_5 HDOD domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000085 490.0
BYDH2_k127_2352488_6 Dienelactone hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000171 463.0
BYDH2_k127_2352488_7 Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate K08289 - 2.1.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001967 378.0
BYDH2_k127_2352488_8 N-acetylmuramoyl-L-alanine amidase (Family 2) K03806 GO:0000270,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0006022,GO:0006026,GO:0006027,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0008745,GO:0009056,GO:0009057,GO:0009253,GO:0009254,GO:0009392,GO:0016020,GO:0016787,GO:0016810,GO:0016811,GO:0019867,GO:0030203,GO:0043167,GO:0043169,GO:0043170,GO:0046872,GO:0046914,GO:0061783,GO:0071704,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575 3.5.1.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006088 366.0
BYDH2_k127_2352488_9 'signal transduction protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001111 359.0
BYDH2_k127_2375810_0 VIT family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000692 393.0
BYDH2_k127_2375810_1 Lipid A 3-O-deacylase (PagL) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001818 372.0
BYDH2_k127_2375810_2 TIGRFAM Methionine sulphoxide reductase B K07305 - 1.8.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002921 362.0
BYDH2_k127_2375810_3 - - - - 0.000000000000000000000000000000000000000000000000000000000749 203.0
BYDH2_k127_2375810_4 Protein of unknown function (DUF3617) - - - 0.0000000000000000000000000000000000000000000000764 168.0
BYDH2_k127_2416056_0 glycyl-tRNA aminoacylation K01879 - 6.1.1.14 6.758e-236 734.0
BYDH2_k127_2416056_1 Glycyl-tRNA synthetase K01878 - 6.1.1.14 4.751e-203 632.0
BYDH2_k127_2416056_2 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 0.00000000000000000000000000000003003 125.0
BYDH2_k127_2453488_0 pilus assembly protein FimV K08086 - - 0.0 1238.0
BYDH2_k127_2453488_1 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 0.0 998.0
BYDH2_k127_2453488_10 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001792 571.0
BYDH2_k127_2453488_11 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008328 532.0
BYDH2_k127_2453488_12 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 - 5.4.99.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003069 500.0
BYDH2_k127_2453488_13 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004397 413.0
BYDH2_k127_2453488_14 Belongs to the TrpF family K01817 - 5.3.1.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000564 395.0
BYDH2_k127_2453488_15 Sporulation related domain K03749 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007912 350.0
BYDH2_k127_2453488_16 Colicin V production K03558 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001657 299.0
BYDH2_k127_2453488_17 Rubrerythrin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006851 287.0
BYDH2_k127_2453488_18 Transposase DDE domain - - - 0.0000000000003569 68.0
BYDH2_k127_2453488_2 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 6.259e-300 921.0
BYDH2_k127_2453488_3 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 GO:0000162,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0042802,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.2.1.20 2.95e-262 808.0
BYDH2_k127_2453488_4 Belongs to the folylpolyglutamate synthase family K11754 - 6.3.2.12,6.3.2.17 1.297e-260 805.0
BYDH2_k127_2453488_5 Nucleoside H+ symporter K05820 - - 6.36e-246 760.0
BYDH2_k127_2453488_6 Catalyzes the formation of L-homocysteine from O- succinyl-L-homoserine (OSHS) and hydrogen sulfide K01739,K10764 - 2.5.1.48 4.372e-243 752.0
BYDH2_k127_2453488_7 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 2.496e-239 740.0
BYDH2_k127_2453488_8 Cysteine-rich domain - - - 2.075e-230 713.0
BYDH2_k127_2453488_9 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 GO:0003674,GO:0003824,GO:0003862,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006551,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009098,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.85 8.628e-214 665.0
BYDH2_k127_2513585_0 Domain of Unknown Function (DUF748) - - - 0.0 1816.0
BYDH2_k127_2513585_1 PFAM Copper resistance D K07245 - - 0.0 1266.0
BYDH2_k127_2513585_10 VanZ like family - - - 5.943e-194 608.0
BYDH2_k127_2513585_11 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001244 534.0
BYDH2_k127_2513585_12 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 - 6.3.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004215 495.0
BYDH2_k127_2513585_13 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004979 479.0
BYDH2_k127_2513585_14 Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily K01834 - 5.4.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001459 423.0
BYDH2_k127_2513585_15 Ribosomal RNA adenine dimethylase K00573 - 2.1.1.77 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001813 411.0
BYDH2_k127_2513585_16 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) K00950 - 2.7.6.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004424 329.0
BYDH2_k127_2513585_17 Uracil DNA glycosylase superfamily K03649 - 3.2.2.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003333 328.0
BYDH2_k127_2513585_18 Peptidyl-prolyl cis-trans isomerase K01802,K03772 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004073 298.0
BYDH2_k127_2513585_19 Protein of unknown function (DUF454) K09790 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002432 287.0
BYDH2_k127_2513585_2 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 - 4.1.99.17 0.0 1255.0
BYDH2_k127_2513585_20 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000106 239.0
BYDH2_k127_2513585_21 PFAM Copper resistance protein CopC K07156 - - 0.00000000000000000000000000000000000000000000000000000000000000000009798 232.0
BYDH2_k127_2513585_3 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 1.698e-297 913.0
BYDH2_k127_2513585_4 Domain of unknown function (DUF4139) - - - 3.759e-290 893.0
BYDH2_k127_2513585_5 Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control K00970 - 2.7.7.19 4.588e-290 892.0
BYDH2_k127_2513585_6 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 - - 3.336e-284 875.0
BYDH2_k127_2513585_7 response regulator containing a CheY-like receiver - - - 3.825e-221 688.0
BYDH2_k127_2513585_8 TIGRFAM type I secretion outer membrane protein, TolC K12340 - - 1.01e-206 650.0
BYDH2_k127_2513585_9 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 4.408e-206 644.0
BYDH2_k127_253275_0 The M ring may be actively involved in energy transduction K02409 - - 0.0 1004.0
BYDH2_k127_253275_1 ATP synthase alpha/beta family, nucleotide-binding domain K02412 - 3.6.3.14 6.536e-294 903.0
BYDH2_k127_253275_2 Signal transduction histidine kinase K10942 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004567 569.0
BYDH2_k127_253275_3 Flagellar hook-length control K02414 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002259 530.0
BYDH2_k127_253275_4 Flagellar motor switch K02410 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004131 454.0
BYDH2_k127_253275_5 flagellar assembly protein FliH K02411 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006505 405.0
BYDH2_k127_253275_6 Flagellar FliJ protein K02413 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003658 260.0
BYDH2_k127_2856410_0 3-hydroxyacyl-CoA dehydrogenase K07516 - 1.1.1.35 0.0 1382.0
BYDH2_k127_2856410_1 Putative diguanylate phosphodiesterase K21023 - 2.7.7.65 0.0 1035.0
BYDH2_k127_2856410_2 Metal-dependent hydrolase HDOD - - - 1.368e-262 813.0
BYDH2_k127_2856410_3 Belongs to the thiolase family K00632 - 2.3.1.16 2.881e-249 771.0
BYDH2_k127_2856410_4 Belongs to the UPF0176 family K07146 - - 1.226e-195 610.0
BYDH2_k127_2856410_5 cytochrome - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002614 293.0
BYDH2_k127_2856410_6 manually curated - - - 0.00000000000003256 73.0
BYDH2_k127_2856410_7 - - - - 0.00000000000007507 72.0
BYDH2_k127_2887595_0 Sulfatase K01130 - 3.1.6.1 4.033e-280 867.0
BYDH2_k127_2887595_1 Cytochrome c554 and c-prime - - - 4.863e-264 834.0
BYDH2_k127_2887595_2 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 1.033e-218 680.0
BYDH2_k127_2887595_3 Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP K00575 - 2.1.1.80 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001281 587.0
BYDH2_k127_2887595_4 PFAM Chemotaxis methyl-accepting receptor, signalling K03406,K03776,K05874 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008887 515.0
BYDH2_k127_2887595_5 Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis K03411 - 3.5.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002059 393.0
BYDH2_k127_2887595_6 NlpC/P60 family K13695,K19303 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005047 315.0
BYDH2_k127_2887595_7 Protein of unknown function - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000134 323.0
BYDH2_k127_2887595_8 Domain of unknown function (DUF4389) - - - 0.0000000000000000000000000000000000000000000000000000000179 198.0
BYDH2_k127_2903665_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 0.0 1750.0
BYDH2_k127_2903665_1 3-hydroxyacyl-CoA dehydrogenase K07516 - 1.1.1.35 3.556e-233 724.0
BYDH2_k127_2903665_2 DNA polymerase III (Delta subunit) K02340 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006148 605.0
BYDH2_k127_2903665_3 PFAM Peptidase M48 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000997 458.0
BYDH2_k127_2903665_4 Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane K03643 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001506 275.0
BYDH2_k127_2903665_5 PFAM Glyoxalase bleomycin resistance protein dioxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003379 239.0
BYDH2_k127_2903665_6 ArsC family K00537 - 1.20.4.1 0.00000000000000000000000000000000000000000000000000000000000000003222 224.0
BYDH2_k127_2903665_7 AraC-like ligand binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000001365 221.0
BYDH2_k127_2903665_8 Dodecin K09165 - - 0.00000000000000000000000000000000004084 134.0
BYDH2_k127_2903665_9 Protein of unknown function (DUF3622) - - - 0.00000000000000000000000000001736 119.0
BYDH2_k127_2973927_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K15726 - - 0.0 1964.0
BYDH2_k127_2973927_1 Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA K12297 - 2.1.1.173,2.1.1.264 0.0 1418.0
BYDH2_k127_2973927_10 Protein of unknown function (DUF433) - - - 0.0000000000000000000141 94.0
BYDH2_k127_2973927_2 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions K01507 - 3.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009526 367.0
BYDH2_k127_2973927_3 Zeta toxin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007409 282.0
BYDH2_k127_2973927_4 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K15727 - - 0.00000000000000000000000000000000000000000000000000000000000000008808 221.0
BYDH2_k127_2973927_5 ParD-like antitoxin of type II bacterial toxin-antitoxin system - - - 0.000000000000000000000000000000000000000002082 159.0
BYDH2_k127_2973927_6 DNA-binding protein VF530 - - - 0.00000000000000000000000000000000000000007411 156.0
BYDH2_k127_2973927_7 RNA-binding K14761 - - 0.0000000000000000000000000000000000007623 139.0
BYDH2_k127_2973927_8 HIRAN domain - - - 0.00000000000000000000000000001439 121.0
BYDH2_k127_2973927_9 Metal dependent phosphohydrolases with conserved 'HD' motif. K07012 - - 0.000000000000000000000000013 115.0
BYDH2_k127_3013460_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00283 - 1.4.4.2 1.717e-317 972.0
BYDH2_k127_3013460_1 pfkB family carbohydrate kinase K00852,K00856 - 2.7.1.15,2.7.1.20 3.604e-200 624.0
BYDH2_k127_3013460_2 Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides K11065 - 1.11.1.15 0.000000000000000000000000000000000000000000000000000001016 192.0
BYDH2_k127_3013460_3 - - - - 0.0000000001163 64.0
BYDH2_k127_3015276_0 GGDEF domain - - - 4.935e-288 886.0
BYDH2_k127_3015276_1 PFAM Glycosyl transferase, family 2 K11936 - - 5.098e-267 824.0
BYDH2_k127_3015276_2 Subtilase family K08651,K14645 - 3.4.21.66 1.213e-246 765.0
BYDH2_k127_3015276_3 Bacterial protein of unknown function (Gcw_chp) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001875 502.0
BYDH2_k127_3015276_4 PFAM RNA polymerase sigma factor 70, region 4 type 2 K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006836 391.0
BYDH2_k127_3015276_5 Putative zinc-finger - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002678 392.0
BYDH2_k127_3015276_7 Outer membrane efflux protein - - - 0.00000000000000009257 79.0
BYDH2_k127_3015276_8 PFAM transposase, mutator type - - - 0.000000002302 60.0
BYDH2_k127_302646_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 GO:0000166,GO:0003674,GO:0003824,GO:0004748,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005971,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009262,GO:0009263,GO:0009987,GO:0016491,GO:0016725,GO:0016728,GO:0018130,GO:0019438,GO:0019637,GO:0032991,GO:0034641,GO:0034654,GO:0036094,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046483,GO:0055086,GO:0055114,GO:0061731,GO:0071704,GO:0090407,GO:0097159,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902494,GO:1990204 1.17.4.1 0.0 1303.0
BYDH2_k127_3108521_0 Binding-protein-dependent transport system inner membrane component K02011 - - 0.0 1012.0
BYDH2_k127_3108521_1 50S ribosome-binding GTPase K06946 - - 4.539e-304 935.0
BYDH2_k127_3108521_10 Polysaccharide biosynthesis/export protein K01991 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001027 493.0
BYDH2_k127_3108521_11 Protein of unknown function (DUF3750) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002707 476.0
BYDH2_k127_3108521_12 TIGRFAM peptidyl-prolyl cis-trans isomerase, EpsD family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004572 420.0
BYDH2_k127_3108521_13 Belongs to the thioredoxin family K03671 - - 0.0000000000000000000000000000000000000000000000000000000000000000004964 229.0
BYDH2_k127_3108521_14 Bacterial protein of unknown function (DUF882) - - - 0.00000000000000000000000000000000000000000000000000000000000162 209.0
BYDH2_k127_3108521_15 Cupin domain K11312 - - 0.00000000000000000000000000000000000000000000000000000000003443 206.0
BYDH2_k127_3108521_16 AAA domain K08252,K16692 - 2.7.10.1 0.00000000000000000000000000000000000000000008101 161.0
BYDH2_k127_3108521_17 Binds the 23S rRNA K02909 - - 0.0000000000000000000000000000000000000002924 149.0
BYDH2_k127_3108521_2 Putative peptidoglycan binding domain K21470 - - 4.154e-297 917.0
BYDH2_k127_3108521_3 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 1.817e-268 828.0
BYDH2_k127_3108521_4 PFAM Peptidase M18 K01267 - 3.4.11.21 3.408e-257 795.0
BYDH2_k127_3108521_5 Domain of unknown function (DUF697) - - - 2.475e-248 768.0
BYDH2_k127_3108521_6 Chain length determinant protein - - - 3.192e-237 739.0
BYDH2_k127_3108521_7 Zinc-binding dehydrogenase K12957,K13979 - - 2.121e-216 672.0
BYDH2_k127_3108521_8 Bacterial extracellular solute-binding protein K02012 - - 5.689e-208 648.0
BYDH2_k127_3108521_9 Belongs to the ABC transporter superfamily K02010 - 3.6.3.30 6.928e-207 646.0
BYDH2_k127_3120400_0 Dicarboxylate transport - - - 0.0 1289.0
BYDH2_k127_3120400_1 LexA-binding, inner membrane-associated putative hydrolase K07038 - - 1.591e-207 649.0
BYDH2_k127_3120400_2 PFAM Glutamine amidotransferase class-I K01951 - 6.3.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001071 474.0
BYDH2_k127_3120400_3 YnbE-like lipoprotein - - - 0.0000000000000000000000000000000004018 131.0
BYDH2_k127_3120400_4 PFAM Uncharacterised conserved protein UCP025560 K09978 - - 0.0000000000000000000000000000074 119.0
BYDH2_k127_3144313_0 TonB-dependent receptor K16090 - - 0.0 1253.0
BYDH2_k127_3144313_1 - - - - 0.0 1082.0
BYDH2_k127_3144313_2 PFAM transposase, IS4 family protein K07481 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004403 406.0
BYDH2_k127_3165664_0 PFAM glycosyl transferase, family 51 K05366 - 2.4.1.129,3.4.16.4 0.0 1472.0
BYDH2_k127_3165664_1 Belongs to the GSP D family K02666 - - 0.0 1210.0
BYDH2_k127_3165664_10 Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor K03524 - 6.3.4.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004442 478.0
BYDH2_k127_3165664_11 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003954 466.0
BYDH2_k127_3165664_12 Phosphoribosyl transferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001757 432.0
BYDH2_k127_3165664_13 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002483 433.0
BYDH2_k127_3165664_14 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006416 430.0
BYDH2_k127_3165664_15 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000122 394.0
BYDH2_k127_3165664_16 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K01947,K03525 - 2.7.1.33,6.3.4.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004535 381.0
BYDH2_k127_3165664_17 One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome K02926 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004113 375.0
BYDH2_k127_3165664_18 Pilus assembly protein, PilO K02664 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007596 376.0
BYDH2_k127_3165664_19 Necessary for normal cell division and for the maintenance of normal septation K03978 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003406 372.0
BYDH2_k127_3165664_2 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 5.854e-267 824.0
BYDH2_k127_3165664_20 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008547 355.0
BYDH2_k127_3165664_21 Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring K01935 - 6.3.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006756 341.0
BYDH2_k127_3165664_22 The physiological role of BioH is to remove the methyl group introduced by BioC when the pimeloyl moiety is complete. It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway through the hydrolysis of the ester bonds of pimeloyl-ACP esters K02170 - 3.1.1.85 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003218 338.0
BYDH2_k127_3165664_23 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008709 332.0
BYDH2_k127_3165664_24 PFAM Fimbrial assembly K02663 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003103 326.0
BYDH2_k127_3165664_25 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002534 309.0
BYDH2_k127_3165664_26 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004972 295.0
BYDH2_k127_3165664_27 Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide K03216 - 2.1.1.207 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005014 291.0
BYDH2_k127_3165664_28 PFAM Pilus assembly protein K02665 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005855 292.0
BYDH2_k127_3165664_29 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 - - 0.000000000000000000000000000000000000000000000000000000000000000000000006608 246.0
BYDH2_k127_3165664_3 TIGRFAM type IV pilus assembly protein PilM K02662 - - 5.475e-222 690.0
BYDH2_k127_3165664_30 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 - - 0.00000000000000000000000000000000000000000000000000000000000000000000005325 241.0
BYDH2_k127_3165664_31 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 - - 0.0000000000000000000000000000000000000000000000000000000000000000005349 228.0
BYDH2_k127_3165664_32 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 - - 0.000000000000000000000000000000000000000000000000000000000000000002165 228.0
BYDH2_k127_3165664_33 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 - - 0.000000000000000000000000000000000000000000000000000000000000000008754 225.0
BYDH2_k127_3165664_34 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 - - 0.00000000000000000000000000000000000000000000000000000000000000004218 225.0
BYDH2_k127_3165664_35 - - - - 0.0000000000000000000000000000000000000000000000000000000000000282 216.0
BYDH2_k127_3165664_36 2'-5' RNA ligase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000003963 211.0
BYDH2_k127_3165664_37 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 - - 0.000000000000000000000000000000000000000000000000000000000000481 211.0
BYDH2_k127_3165664_38 Binds to the 23S rRNA K02876 - - 0.000000000000000000000000000000000000000000000000000000000004901 210.0
BYDH2_k127_3165664_39 Involved in the binding of tRNA to the ribosomes K02946 - - 0.0000000000000000000000000000000000000000000000000000000001951 203.0
BYDH2_k127_3165664_4 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00652 - 2.3.1.47 7.915e-210 656.0
BYDH2_k127_3165664_40 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 - - 0.000000000000000000000000000000000000000000000000000000000904 203.0
BYDH2_k127_3165664_41 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 - - 0.00000000000000000000000000000000000000000000000000002071 188.0
BYDH2_k127_3165664_42 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit K02895 - - 0.000000000000000000000000000000000000000000000000001034 186.0
BYDH2_k127_3165664_43 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 - - 0.000000000000000000000000000000000000000000000004637 174.0
BYDH2_k127_3165664_44 Ribosomal protein L17 K02879 - - 0.000000000000000000000000000000000000000000000004981 175.0
BYDH2_k127_3165664_45 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 - - 0.000000000000000000000000000000000000000000318 158.0
BYDH2_k127_3165664_46 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.0000000000000000000000000000000000000000664 151.0
BYDH2_k127_3165664_47 Domain of unknown function (DUF4177) - - - 0.00000000000000000000000000000000000001705 143.0
BYDH2_k127_3165664_48 Ribosomal protein L30 K02907 - - 0.0000000000000000000000003802 106.0
BYDH2_k127_3165664_49 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.00000000000000005157 80.0
BYDH2_k127_3165664_5 Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism K01012 - 2.8.1.6 1.061e-208 649.0
BYDH2_k127_3165664_50 Belongs to the universal ribosomal protein uL29 family K02904 - - 0.0000000000000001141 81.0
BYDH2_k127_3165664_51 Belongs to the bacterial ribosomal protein bL36 family K02919 - - 0.0000000000000001341 79.0
BYDH2_k127_3165664_6 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 2.7.7.6 7.045e-206 642.0
BYDH2_k127_3165664_7 Belongs to the ALAD family K01698 GO:0003674,GO:0003824,GO:0004655,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009987,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0043167,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.2.1.24 5.171e-195 610.0
BYDH2_k127_3165664_8 Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl- L-methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway K02169 - 2.1.1.197 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007801 581.0
BYDH2_k127_3165664_9 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003081 541.0
BYDH2_k127_3212448_0 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 4.953e-312 957.0
BYDH2_k127_3212448_1 PFAM Peptidase S13, D-Ala-D-Ala carboxypeptidase C K07259 - 3.4.16.4 4.396e-293 902.0
BYDH2_k127_3212448_10 Thiamine monophosphate synthase - - - 0.000000000000000000000000000000000000000000000000000000002473 206.0
BYDH2_k127_3212448_11 PFAM Rubredoxin-type Fe(Cys)4 protein - - - 0.00000000000000000000000000000000000003054 143.0
BYDH2_k127_3212448_2 Phosphomethylpyrimidine kinase K00941 - 2.7.1.49,2.7.4.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003174 547.0
BYDH2_k127_3212448_3 HAD-superfamily hydrolase, subfamily IA, variant 3 K01091 - 3.1.3.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001836 488.0
BYDH2_k127_3212448_4 Tetrapyrrole (Corrin/Porphyrin) Methylases K07056 - 2.1.1.198 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001243 454.0
BYDH2_k127_3212448_5 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003219 449.0
BYDH2_k127_3212448_6 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004264 382.0
BYDH2_k127_3212448_7 Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione K01759 - 4.4.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000002599 261.0
BYDH2_k127_3212448_8 ApaG domain K06195 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002847 259.0
BYDH2_k127_3212448_9 - - - - 0.0000000000000000000000000000000000000000000000000000000000000236 214.0
BYDH2_k127_3390420_0 Tim44 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008193 536.0
BYDH2_k127_3390420_1 Predicted small integral membrane protein (DUF2165) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001932 310.0
BYDH2_k127_3390420_2 Protein of unknown function (DUF3293) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000009511 249.0
BYDH2_k127_3422456_0 glutamate--cysteine ligase - - - 3.88e-258 800.0
BYDH2_k127_3422456_1 Belongs to the FAD-dependent oxidoreductase 2 family. FRD SDH subfamily K00239 GO:0000104,GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009055,GO:0009060,GO:0009061,GO:0009987,GO:0015980,GO:0016020,GO:0016491,GO:0016627,GO:0016999,GO:0017144,GO:0019752,GO:0022900,GO:0032991,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0045273,GO:0045274,GO:0045281,GO:0045282,GO:0045333,GO:0048037,GO:0050660,GO:0050662,GO:0055114,GO:0070469,GO:0070470,GO:0071704,GO:0071944,GO:0072350,GO:0097159,GO:0098796,GO:0098797,GO:0098803,GO:1901265,GO:1901363,GO:1902494,GO:1990204 1.3.5.1,1.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008996 549.0
BYDH2_k127_3422456_2 succinate dehydrogenase, cytochrome b subunit K00241 - - 0.000000000000000000000000000000000000000000000000000000000000000003422 227.0
BYDH2_k127_3422456_3 Succinate dehydrogenase, hydrophobic K00242 - - 0.000000000000000000000000000001845 126.0
BYDH2_k127_3422456_4 Succinylglutamate desuccinylase / Aspartoacylase family - - - 0.0000000000000000000000000001136 116.0
BYDH2_k127_3453920_0 Belongs to the helicase family. UvrD subfamily K03582 - 3.1.11.5 0.0 2020.0
BYDH2_k127_3453920_1 PD-(D/E)XK nuclease superfamily K01144 - 3.1.11.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006392 534.0
BYDH2_k127_348205_0 Diguanylate cyclase - - - 8.864e-310 955.0
BYDH2_k127_348205_1 PFAM aminotransferase, class I K00812 - 2.6.1.1 6.019e-244 757.0
BYDH2_k127_348205_2 Functions in complex with FlhD as a master transcriptional regulator that regulates transcription of several flagellar and non-flagellar operons by binding to their promoter region. Activates expression of class 2 flagellar genes, including fliA, which is a flagellum-specific sigma factor that turns on the class 3 genes. Also regulates genes whose products function in a variety of physiological pathways K02402 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002748 351.0
BYDH2_k127_348205_3 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 0.0000000000000000000000000000000000000000000000000000000001143 203.0
BYDH2_k127_348205_4 Functions in complex with FlhC as a master transcriptional regulator that regulates transcription of several flagellar and non-flagellar operons by binding to their promoter region. Activates expression of class 2 flagellar genes, including fliA, which is a flagellum-specific sigma factor that turns on the class 3 genes. Also regulates genes whose products function in a variety of physiological pathways K02403 - - 0.000000000000000000000000000000000000000000000000007818 181.0
BYDH2_k127_3499336_0 AMP-binding enzyme C-terminal domain K00666 - - 2.459e-260 812.0
BYDH2_k127_3499336_1 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00639 - 2.3.1.29 2.804e-247 765.0
BYDH2_k127_3499336_2 Nad-dependent epimerase dehydratase - - - 6.536e-200 623.0
BYDH2_k127_3499336_3 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg K00174 - 1.2.7.11,1.2.7.3 4.466e-194 614.0
BYDH2_k127_3499336_4 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase K00261 - 1.4.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005016 530.0
BYDH2_k127_3499336_5 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K00170 - 1.2.7.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005882 494.0
BYDH2_k127_3499336_6 2-oxoacid acceptor oxidoreductase, gamma subunit, pyruvate 2-ketoisovalerate K00172 - 1.2.7.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003174 397.0
BYDH2_k127_3499336_7 Ferritin-like domain K03594 - 1.16.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001704 304.0
BYDH2_k127_3499336_8 PFAM Transposase, IS4-like K07481 - - 0.0000000000001051 72.0
BYDH2_k127_3508815_0 helicase superfamily c-terminal domain K11927 GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008026,GO:0008104,GO:0008150,GO:0008186,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032991,GO:0033036,GO:0035770,GO:0036464,GO:0042623,GO:0043186,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044424,GO:0044444,GO:0044464,GO:0045495,GO:0051179,GO:0060293,GO:0070035,GO:0140098,GO:1990904 3.6.4.13 4.448e-266 822.0
BYDH2_k127_3508815_1 Pfam:Methyltransf_26 - - - 1.651e-222 692.0
BYDH2_k127_3508815_2 PFAM Ketopantoate reductase ApbA PanE, C-terminal K00077 - 1.1.1.169 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001159 592.0
BYDH2_k127_3508815_3 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004485 588.0
BYDH2_k127_3508815_4 MazG-like family - - - 0.000000000000000000000000000000000000000000000000000003183 191.0
BYDH2_k127_3508815_5 NAD(P)H-binding K00091 - 1.1.1.219 0.000000000000000000001377 96.0
BYDH2_k127_3508815_6 NAD(P)H-binding K00091 - 1.1.1.219 0.000002525 49.0
BYDH2_k127_3509888_0 TIGRFAM Phage SPO1 DNA polymerase-related protein K21929 - 3.2.2.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003641 467.0
BYDH2_k127_3509888_1 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) K00991,K12506 - 2.7.7.60,4.6.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007489 441.0
BYDH2_k127_3509888_2 PFAM Peptidase M22, glycoprotease K14742 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008938 436.0
BYDH2_k127_3509888_3 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000287 421.0
BYDH2_k127_3509888_4 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002387 343.0
BYDH2_k127_3509888_5 This enzyme acetylates the N-terminal alanine of ribosomal protein S18 K03789,K14742 - 2.3.1.128 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003153 300.0
BYDH2_k127_3509888_6 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770,K12506 - 2.7.7.60,4.6.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008491 274.0
BYDH2_k127_3552018_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.0 1712.0
BYDH2_k127_3552018_1 ABC-type transport system involved in lysophospholipase L1 biosynthesis permease component K02004 - - 0.0 1549.0
BYDH2_k127_3552018_2 Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs K08300 - 3.1.26.12 0.0 1444.0
BYDH2_k127_3552018_3 Responsible for synthesis of pseudouridine from uracil K06179 - 5.4.99.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001376 606.0
BYDH2_k127_3552018_4 Involved in the biosynthesis of porphyrin-containing compound - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008815 436.0
BYDH2_k127_3552018_5 ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007503 436.0
BYDH2_k127_3552018_6 GDSL-like Lipase/Acylhydrolase family K10804 - 3.1.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009183 333.0
BYDH2_k127_3576025_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004567 309.0
BYDH2_k127_3576025_1 Sel1 domain protein repeat-containing protein K07126 - - 0.0005303 44.0
BYDH2_k127_3599454_0 Bacterial transferase hexapeptide (six repeats) K00640 - 2.3.1.30 2.256e-196 613.0
BYDH2_k127_3599454_1 Pyridoxal-phosphate dependent enzyme K01738 - 2.5.1.47 1.455e-195 612.0
BYDH2_k127_3599454_3 nucleotide-binding Protein - - - 0.000000000001937 69.0
BYDH2_k127_3599454_4 TIR domain - - - 0.000006107 49.0
BYDH2_k127_3621386_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000003033 229.0
BYDH2_k127_3621386_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000002841 219.0
BYDH2_k127_3621386_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000005629 219.0
BYDH2_k127_3621386_3 - - - - 0.00000000000000000000000000000000000000000000000000002104 197.0
BYDH2_k127_3621386_4 - - - - 0.00000000000000000000000000000000000000000000000000003025 196.0
BYDH2_k127_3621386_5 - - - - 0.0000000000000000000000000000000000000000000000000008128 191.0
BYDH2_k127_3631073_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1522.0
BYDH2_k127_3631073_1 Sugar (and other) transporter - - - 3.981e-262 811.0
BYDH2_k127_3631073_2 PFAM Heat shock protein DnaJ, N-terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009328 593.0
BYDH2_k127_3631073_3 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009371 566.0
BYDH2_k127_3631073_4 Uncharacterized protein conserved in bacteria (DUF2325) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009358 346.0
BYDH2_k127_3631073_5 Iron-storage protein K03594 - 1.16.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002559 309.0
BYDH2_k127_3631073_6 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 GO:0000725,GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008047,GO:0008150,GO:0008152,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0030234,GO:0031668,GO:0033554,GO:0034641,GO:0042802,GO:0043085,GO:0043170,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050790,GO:0050896,GO:0051716,GO:0065007,GO:0065009,GO:0071496,GO:0071704,GO:0090304,GO:0097159,GO:0098772,GO:1901360,GO:1901363 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009105 290.0
BYDH2_k127_3631073_7 transporter component K07112 - - 0.0000000000000000000000000000001063 125.0
BYDH2_k127_3631073_8 - - - - 0.00000000000000000000000000000286 120.0
BYDH2_k127_3631073_9 Hemin uptake protein hemP - - - 0.00000000000000000000008162 99.0
BYDH2_k127_3652490_0 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 GO:0006082,GO:0006520,GO:0006566,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009987,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0071704,GO:1901564,GO:1901605 4.3.1.19 1.106e-278 858.0
BYDH2_k127_3652490_1 ABC transporter K06147 - - 3.353e-214 666.0
BYDH2_k127_3652490_2 Domain of unknown function (DUF1854) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007093 291.0
BYDH2_k127_3669496_0 Signal transduction histidine kinase K07636 - 2.7.13.3 3.195e-266 821.0
BYDH2_k127_3669496_1 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) K03183 - 2.1.1.163,2.1.1.201 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001208 490.0
BYDH2_k127_3669496_2 TIGRFAM Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB K07657 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001048 460.0
BYDH2_k127_3669496_3 Protein of unknown function (DUF971) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002398 277.0
BYDH2_k127_3669496_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000000244 223.0
BYDH2_k127_3669496_5 HTH-like domain K07497 - - 0.00000000000000000000000000000000000000000000000000004304 188.0
BYDH2_k127_3669496_6 PFAM Integrase, catalytic core K07497 - - 0.000000000000000006512 82.0
BYDH2_k127_3669496_7 PFAM Transposase, IS4-like - - - 0.00000000000002491 74.0
BYDH2_k127_3669496_8 PFAM Transposase, IS4-like - - - 0.00000000007678 62.0
BYDH2_k127_3689871_0 TIGRFAM TonB-dependent vitamin B12 receptor K16092 - - 0.0 1179.0
BYDH2_k127_3689871_1 Proton-conducting membrane transporter K00342 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001547 516.0
BYDH2_k127_3689871_10 Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation K02232 - 6.3.5.10 0.0000000000000000000004288 96.0
BYDH2_k127_3689871_11 TIGRFAM Undecaprenyl-phosphate glucose phosphotransferase, WcaJ K03606 - - 0.000000000000000000007449 91.0
BYDH2_k127_3689871_2 phospholipase Carboxylesterase K06999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003159 424.0
BYDH2_k127_3689871_3 Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids K19221 - 2.5.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000106 394.0
BYDH2_k127_3689871_4 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005202 365.0
BYDH2_k127_3689871_5 Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate K02231 - 2.7.1.156,2.7.7.62 0.0000000000000000000000000000000000000000000000000000000016 201.0
BYDH2_k127_3689871_6 Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6- dimethylbenzimidazole (DMB) K00768 - 2.4.2.21 0.000000000000000000000000000000000255 137.0
BYDH2_k127_3689871_7 Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation K02232 - 6.3.5.10 0.000000000000000000000000000005575 122.0
BYDH2_k127_3689871_8 Transglutaminase-like superfamily - - - 0.0000000000000000000000003394 107.0
BYDH2_k127_3689871_9 Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate K02231 - 2.7.1.156,2.7.7.62 0.00000000000000000000001711 100.0
BYDH2_k127_3710425_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 0.0 1424.0
BYDH2_k127_3710425_1 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0016787,GO:0019538,GO:0019904,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0097718,GO:0140096,GO:1901564 3.4.11.1 1.253e-308 947.0
BYDH2_k127_3710425_2 TIGRFAM Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004898 428.0
BYDH2_k127_3710425_3 DNA polymerase III (Chi subunit) K02339 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000002806 256.0
BYDH2_k127_3710425_4 - - - - 0.000000000000000000000000000000000000000000000000005882 183.0
BYDH2_k127_3724711_0 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 1.444e-284 877.0
BYDH2_k127_3724711_1 Na H antiporter NhaC K03315 - - 2.689e-272 842.0
BYDH2_k127_3724711_10 Isoprenylcysteine carboxyl methyltransferase (ICMT) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002672 244.0
BYDH2_k127_3724711_11 - - - - 0.00000000000000000000000000000000000000000000000000000000000000001017 226.0
BYDH2_k127_3724711_12 - - - - 0.00000000000000000000000000000000000001491 144.0
BYDH2_k127_3724711_13 Histidine kinase K07680,K07778,K11617,K14988 - 2.7.13.3 0.000000000983 62.0
BYDH2_k127_3724711_2 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 - 2.1.1.190 1.048e-233 725.0
BYDH2_k127_3724711_3 Bacterial regulatory helix-turn-helix protein, lysR family K21703 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007672 587.0
BYDH2_k127_3724711_4 RuBisCO catalyzes two reactions the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site K01601 - 4.1.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003657 473.0
BYDH2_k127_3724711_5 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02194 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006649 399.0
BYDH2_k127_3724711_6 PEP-CTERM motif - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005738 386.0
BYDH2_k127_3724711_7 once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system K02193 - 3.6.3.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000393 378.0
BYDH2_k127_3724711_8 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02195 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005585 350.0
BYDH2_k127_3724711_9 SelR domain K07305,K12267 - 1.8.4.11,1.8.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000462 265.0
BYDH2_k127_3735875_0 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 - - 0.0 1378.0
BYDH2_k127_3735875_1 PFAM Glutaredoxin - - - 6.237e-227 708.0
BYDH2_k127_3735875_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007505 273.0
BYDH2_k127_3735875_3 cytochrome - - - 0.000008338 49.0
BYDH2_k127_3760541_0 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001389 306.0
BYDH2_k127_3760541_1 Alginate export - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007748 260.0
BYDH2_k127_3760541_2 Transposase IS116/IS110/IS902 family - - - 0.000000000000000000000000000000000001145 147.0
BYDH2_k127_3760541_3 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.000000000000000000000000000002724 121.0
BYDH2_k127_3760541_4 Transposase - - - 0.00000000000000000000000000005728 121.0
BYDH2_k127_3760541_6 - - - - 0.00000006132 53.0
BYDH2_k127_3760541_7 PFAM NAD-dependent glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.00004517 49.0
BYDH2_k127_3760541_8 Belongs to the 'phage' integrase family - - - 0.0002368 47.0
BYDH2_k127_3780526_0 Urease alpha-subunit, N-terminal domain K01428 - 3.5.1.5 0.0 1101.0
BYDH2_k127_3780526_1 short chain amide porin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001536 610.0
BYDH2_k127_3780526_10 Transposase - - - 0.0000000000000004412 79.0
BYDH2_k127_3780526_2 Urea transporter K08717 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002328 501.0
BYDH2_k127_3780526_3 Required for maturation of urease via the functional incorporation of the urease nickel metallocenter K03190 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002271 405.0
BYDH2_k127_3780526_4 Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG K03189 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002952 387.0
BYDH2_k127_3780526_5 Required for maturation of urease via the functional incorporation of the urease nickel metallocenter K03188 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005458 347.0
BYDH2_k127_3780526_6 Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly K03187 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001049 286.0
BYDH2_k127_3780526_7 Urease beta subunit K01429 - 3.5.1.5 0.00000000000000000000000000000000000000000000000000000000021 203.0
BYDH2_k127_3780526_8 Urease, gamma subunit K01430 - 3.5.1.5 0.0000000000000000000000000000000000000000000000000002868 185.0
BYDH2_k127_3780526_9 Transposase K07497 - - 0.000000000000000000000000000004779 120.0
BYDH2_k127_3805772_0 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.0 1060.0
BYDH2_k127_3805772_1 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 2.27e-322 992.0
BYDH2_k127_3805772_2 PFAM Peptidase M16 K07263 - - 7.706e-283 873.0
BYDH2_k127_3805772_3 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03110 - - 1.317e-198 621.0
BYDH2_k127_3805772_4 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes K03089 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006501 521.0
BYDH2_k127_3805772_5 Part of the ABC transporter FtsEX involved in cellular division K09811 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001697 501.0
BYDH2_k127_3805772_6 TIGRFAM Cell division ATP-binding protein FtsE K09812 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007153 419.0
BYDH2_k127_3805772_7 Yqey-like protein K09117 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006878 259.0
BYDH2_k127_3805772_8 Belongs to the bacterial ribosomal protein bS21 family K02970 - - 0.00000000000000000000000000000000003522 134.0
BYDH2_k127_3805772_9 EF hand - - - 0.000000000000000002946 84.0
BYDH2_k127_3834873_0 Histidine kinase K03407 GO:0003674,GO:0005488,GO:0005515,GO:0019904 2.7.13.3 0.0 1270.0
BYDH2_k127_3834873_1 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor - - - 9.84e-314 964.0
BYDH2_k127_3834873_10 PFAM Transposase, IS4-like K07481 - - 0.0000000000000000000002728 98.0
BYDH2_k127_3834873_11 PFAM Flagellar protein FlaG protein K06603 - - 0.0000000000000000000009772 97.0
BYDH2_k127_3834873_12 - - - - 0.00000000000009991 72.0
BYDH2_k127_3834873_15 - - - - 0.0000002018 53.0
BYDH2_k127_3834873_2 SMART Diguanylate cyclase K13590 - 2.7.7.65 2.926e-307 947.0
BYDH2_k127_3834873_3 PFAM Chemotaxis methyl-accepting receptor, signalling K03406,K03776,K05874 - - 3.132e-247 775.0
BYDH2_k127_3834873_4 Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella K02406 - - 4.49e-207 654.0
BYDH2_k127_3834873_5 HDOD domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001931 569.0
BYDH2_k127_3834873_6 TIGRFAM Diguanylate cyclase K13590 - 2.7.7.65 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003332 477.0
BYDH2_k127_3834873_7 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001061 397.0
BYDH2_k127_3834873_8 PFAM CheW-like protein K03408 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003139 306.0
BYDH2_k127_3834873_9 PFAM Signal transduction response regulator, receiver K03413 - - 0.000000000000000000000000000000000000000000000000000000000000000000009696 233.0
BYDH2_k127_3846632_0 BT1 family - - - 0.0 1032.0
BYDH2_k127_3846632_1 Involved in the TonB-independent uptake of proteins K03641 - - 2.852e-273 842.0
BYDH2_k127_3846632_10 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001039 489.0
BYDH2_k127_3846632_11 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process K03981 - 5.3.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001733 474.0
BYDH2_k127_3846632_12 NIF3 (NGG1p interacting factor 3) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003107 473.0
BYDH2_k127_3846632_13 MotA TolQ ExbB proton channel K03562 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001454 430.0
BYDH2_k127_3846632_14 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0008144,GO:0016829,GO:0016840,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0046872,GO:0046983,GO:0048037,GO:0050662,GO:0051536,GO:0051539,GO:0051540,GO:1901681,GO:1904047 4.3.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001902 429.0
BYDH2_k127_3846632_15 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) K06920 - 6.3.4.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004324 400.0
BYDH2_k127_3846632_16 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002565 372.0
BYDH2_k127_3846632_17 Cytochrome P460 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001607 352.0
BYDH2_k127_3846632_18 Belongs to the ompA family K03640 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005538 321.0
BYDH2_k127_3846632_19 PEP-CTERM motif - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001255 296.0
BYDH2_k127_3846632_2 MltA specific insert domain K08304 - - 3.725e-256 790.0
BYDH2_k127_3846632_20 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001311 288.0
BYDH2_k127_3846632_21 4-hydroxybenzoyl-CoA thioesterase K07107 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002853 257.0
BYDH2_k127_3846632_22 Biopolymer transport protein ExbD TolR K03560 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000009835 246.0
BYDH2_k127_3846632_23 Gram-negative-bacterium-type cell outer membrane assembly K04064,K06186 GO:0006950,GO:0006970,GO:0008150,GO:0009628,GO:0050896 - 0.000000000000000000000000000000000000000000000000000000000000000000268 231.0
BYDH2_k127_3846632_24 - - - - 0.0000000000000000000000000000000000000000000000000000000000107 208.0
BYDH2_k127_3846632_25 Aldolase K01633 - 1.13.11.81,4.1.2.25,5.1.99.8 0.00000000000000000000000000000000000000000000000000000000002282 207.0
BYDH2_k127_3846632_26 PEP-CTERM motif - - - 0.0000000000000000000000000000000000000321 150.0
BYDH2_k127_3846632_27 Competence protein ComEA K02237 - - 0.0000000000000000000000000000000000001568 143.0
BYDH2_k127_3846632_28 Protein of unknown function (DUF3460) - - - 0.00000000000000000000000000002424 117.0
BYDH2_k127_3846632_3 TIGRFAM Ubiquinone biosynthesis hydroxylase, UbiH UbiF VisC COQ6 K03185 - - 1.377e-242 752.0
BYDH2_k127_3846632_30 PFAM Integrase, catalytic core K07497 - - 0.00003723 46.0
BYDH2_k127_3846632_4 Belongs to the peptidase S1C family K04691,K04772 - - 8.154e-226 702.0
BYDH2_k127_3846632_5 PFAM DNA methylase, adenine-specific K03427 - 2.1.1.72 3.055e-214 665.0
BYDH2_k127_3846632_6 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 - 2.3.1.234 1.592e-205 641.0
BYDH2_k127_3846632_7 Belongs to the cysteine synthase cystathionine beta- synthase family K12339 GO:0000003,GO:0000096,GO:0000097,GO:0000902,GO:0000904,GO:0003006,GO:0003674,GO:0003824,GO:0004124,GO:0005488,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005773,GO:0005774,GO:0005777,GO:0005829,GO:0005886,GO:0006082,GO:0006520,GO:0006534,GO:0006535,GO:0006563,GO:0006790,GO:0006807,GO:0007568,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009507,GO:0009532,GO:0009536,GO:0009566,GO:0009567,GO:0009570,GO:0009653,GO:0009826,GO:0009856,GO:0009860,GO:0009932,GO:0009987,GO:0010035,GO:0010038,GO:0016020,GO:0016043,GO:0016049,GO:0016053,GO:0016740,GO:0016765,GO:0019344,GO:0019752,GO:0019842,GO:0019953,GO:0022414,GO:0030154,GO:0030170,GO:0031090,GO:0032501,GO:0032502,GO:0032989,GO:0036094,GO:0040007,GO:0042221,GO:0042579,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0044706,GO:0046394,GO:0046686,GO:0048037,GO:0048046,GO:0048468,GO:0048588,GO:0048589,GO:0048856,GO:0048868,GO:0048869,GO:0050662,GO:0050896,GO:0051704,GO:0060560,GO:0070279,GO:0071704,GO:0071840,GO:0071944,GO:0097159,GO:0098588,GO:0098805,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.5.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001246 571.0
BYDH2_k127_3846632_8 Short-chain dehydrogenase reductase SDR - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001032 534.0
BYDH2_k127_3846632_9 TolA C-terminal K03646 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001279 529.0
BYDH2_k127_3848487_0 RNA polymerase recycling family C-terminal K03580 - - 0.0 1431.0
BYDH2_k127_3848487_1 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K07277 - - 0.0 1418.0
BYDH2_k127_3848487_10 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002441 450.0
BYDH2_k127_3848487_11 Protein of unknown function (DUF2490) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001408 364.0
BYDH2_k127_3848487_12 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005482 342.0
BYDH2_k127_3848487_13 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001421 337.0
BYDH2_k127_3848487_14 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001544 336.0
BYDH2_k127_3848487_15 Peptidyl-prolyl cis-trans isomerase K03775 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001496 319.0
BYDH2_k127_3848487_16 Belongs to the skp family K06142 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001277 289.0
BYDH2_k127_3848487_17 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 - 4.2.1.59 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002243 287.0
BYDH2_k127_3848487_18 Cytochrome C oxidase, cbb3-type, subunit III K12263 - - 0.000000000000000000000000000000000000000000000000000001963 191.0
BYDH2_k127_3848487_2 zinc metalloprotease K11749 - - 1.321e-282 870.0
BYDH2_k127_3848487_3 Belongs to the anaerobic coproporphyrinogen-III oxidase family - GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006782,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016491,GO:0016627,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0046501,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0051989,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 - 4.975e-275 850.0
BYDH2_k127_3848487_4 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 1.041e-243 757.0
BYDH2_k127_3848487_5 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000119 539.0
BYDH2_k127_3848487_6 Belongs to the CDS family K00981 - 2.7.7.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001667 510.0
BYDH2_k127_3848487_7 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002649 505.0
BYDH2_k127_3848487_8 Belongs to the universal ribosomal protein uS2 family K02967 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003343 481.0
BYDH2_k127_3848487_9 helix_turn_helix, cAMP Regulatory protein K01420 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003806 479.0
BYDH2_k127_3895205_0 Specifically methylates the 50S ribosomal protein L3 on a specific glutamine residue K07320 - 2.1.1.298 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002221 598.0
BYDH2_k127_3895205_1 Belongs to the pseudouridine synthase RsuA family K06178 - 5.4.99.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002435 515.0
BYDH2_k127_3895205_2 Haemolysin-type calcium-binding repeat (2 copies) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009492 428.0
BYDH2_k127_3895205_3 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K01563,K11991 - 3.5.4.33,3.8.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005189 324.0
BYDH2_k127_3895205_4 ErfK YbiS YcfS YnhG family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000008478 234.0
BYDH2_k127_3895205_5 - - - - 0.000000000000000000000000000000000000000000000006263 173.0
BYDH2_k127_3895205_6 addiction module antidote protein HigA K21498 - - 0.00000000000000000002579 91.0
BYDH2_k127_3950981_0 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 0.0 1282.0
BYDH2_k127_3950981_1 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 GO:0001775,GO:0002376,GO:0003674,GO:0003824,GO:0003883,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006213,GO:0006220,GO:0006221,GO:0006241,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008283,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009163,GO:0009165,GO:0009199,GO:0009201,GO:0009208,GO:0009209,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0015949,GO:0016874,GO:0016879,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0032943,GO:0034404,GO:0034641,GO:0034654,GO:0042098,GO:0042100,GO:0042110,GO:0042113,GO:0042221,GO:0042455,GO:0042493,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045321,GO:0046036,GO:0046131,GO:0046132,GO:0046134,GO:0046390,GO:0046483,GO:0046649,GO:0046651,GO:0050896,GO:0055086,GO:0070661,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.4.2 0.0 1119.0
BYDH2_k127_3950981_10 Removes the pyruvyl group from chorismate, with concomitant aromatization of the ring, to provide 4- hydroxybenzoate (4HB) for the ubiquinone pathway K03181 - 4.1.3.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006333 356.0
BYDH2_k127_3950981_11 Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol, an intermediate step in ubiquinone biosynthesis K03182 - 4.1.1.98 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002066 267.0
BYDH2_k127_3950981_12 Endoribonuclease L-PSP K09022 - 3.5.99.10 0.000000000000000000000000000000000000000000000000000000000000000000000002967 245.0
BYDH2_k127_3950981_13 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic K05589 - - 0.0000000000000000000000000000000000000000000004097 169.0
BYDH2_k127_3950981_2 argininosuccinate lyase K01755 - 4.3.2.1 5.992e-298 919.0
BYDH2_k127_3950981_3 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 GO:0000015,GO:0000287,GO:0003674,GO:0003824,GO:0004634,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005856,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009986,GO:0009987,GO:0016052,GO:0016053,GO:0016310,GO:0016829,GO:0016835,GO:0016836,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0032991,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042802,GO:0042866,GO:0043167,GO:0043169,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046872,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1902494 4.2.1.11 1.343e-265 819.0
BYDH2_k127_3950981_4 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 1.235e-250 775.0
BYDH2_k127_3950981_5 Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate K03179 - 2.5.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001151 574.0
BYDH2_k127_3950981_6 Fructosamine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002615 542.0
BYDH2_k127_3950981_7 membrane K08994 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004325 497.0
BYDH2_k127_3950981_8 Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol, an intermediate step in ubiquinone biosynthesis K03182 - 4.1.1.98 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002369 441.0
BYDH2_k127_3950981_9 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004989 365.0
BYDH2_k127_3963935_0 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 0.0 1575.0
BYDH2_k127_3963935_1 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.0 1298.0
BYDH2_k127_3963935_10 - - - - 0.000000000000000007451 85.0
BYDH2_k127_3963935_2 Participates in both transcription termination and antitermination K02600 - - 2.483e-299 920.0
BYDH2_k127_3963935_3 Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol, an intermediate step in ubiquinone biosynthesis K03182 - 4.1.1.98 2.883e-256 790.0
BYDH2_k127_3963935_4 Metallo-beta-lactamase superfamily K01069 - 3.1.2.6 2.857e-197 616.0
BYDH2_k127_3963935_5 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 - 5.4.99.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007518 586.0
BYDH2_k127_3963935_6 NADH:flavin oxidoreductase / NADH oxidase family K10680 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001042 582.0
BYDH2_k127_3963935_7 Required for maturation of 30S ribosomal subunits K09748 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004832 303.0
BYDH2_k127_3963935_8 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001277 251.0
BYDH2_k127_3963935_9 Putative member of DMT superfamily (DUF486) K09922 - - 0.000000000000000000000000000000000000000000004835 164.0
BYDH2_k127_399538_0 ABC transporter K06147,K18893 - - 0.0 1171.0
BYDH2_k127_399538_1 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 2.325e-310 953.0
BYDH2_k127_399538_2 TraB family - - - 3.108e-242 751.0
BYDH2_k127_399538_3 Protein of unknown function (DUF692) K09930 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001432 514.0
BYDH2_k127_399538_4 two-component system sensor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000137 475.0
BYDH2_k127_399538_5 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006526 400.0
BYDH2_k127_399538_6 Putative DNA-binding domain K09929 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008769 279.0
BYDH2_k127_399538_7 Transcriptional regulatory protein, C terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000009357 233.0
BYDH2_k127_399538_8 - - - - 0.00000000000000000000000000000000000000009141 154.0
BYDH2_k127_4095623_0 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K08483 - 2.7.3.9 0.0 1102.0
BYDH2_k127_4095623_1 Transfers a succinyl group from succinyl-CoA to L- homoserine, forming succinyl-L-homoserine K00641 - 2.3.1.31 9.867e-248 764.0
BYDH2_k127_4095623_10 PFAM RNA polymerase sigma factor 70, region 4 type 2 K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000238 361.0
BYDH2_k127_4095623_11 Thioesterase superfamily K10806 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001811 278.0
BYDH2_k127_4095623_12 system, fructose subfamily IIA component K02821 - 2.7.1.194 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001485 267.0
BYDH2_k127_4095623_13 Protein of unknown function (DUF3619) - - - 0.000000000000000000000000000000000000000000000000000004684 195.0
BYDH2_k127_4095623_14 Cold shock protein domain K03704 - - 0.000000000000000000000000000000000000004569 145.0
BYDH2_k127_4095623_15 PTS HPr component phosphorylation site K11189 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.00000000000000000000000000000002641 127.0
BYDH2_k127_4095623_16 Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase K09862 - - 0.0000000000000000000000000000002828 124.0
BYDH2_k127_4095623_17 Protein of unknown function (DUF1353) - - - 0.000000000000000000000000000000296 125.0
BYDH2_k127_4095623_18 Domain of unknown function (DUF4372) - - - 0.0000003845 56.0
BYDH2_k127_4095623_2 Protein of unknown function, DUF484 K02488 - 2.7.7.65 2.447e-234 726.0
BYDH2_k127_4095623_3 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 - 2.3.1.1,2.3.1.35 9.801e-218 680.0
BYDH2_k127_4095623_4 PFAM Sulfotransferase K01014 - 2.8.2.1 3.198e-203 632.0
BYDH2_k127_4095623_5 Belongs to the Nudix hydrolase family K03574 - 3.6.1.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002741 581.0
BYDH2_k127_4095623_6 Protein of unknown function (DUF815) K06923 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004789 562.0
BYDH2_k127_4095623_7 Protein of unknown function (DUF455) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002549 535.0
BYDH2_k127_4095623_8 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002161 444.0
BYDH2_k127_4095623_9 PFAM Methionine biosynthesis MetW - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000426 430.0
BYDH2_k127_4107595_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 1.606e-320 983.0
BYDH2_k127_4107595_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 6.685e-293 900.0
BYDH2_k127_4107595_10 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02109 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001924 281.0
BYDH2_k127_4107595_11 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002892 260.0
BYDH2_k127_4107595_12 ATP synthase I chain K02116 - - 0.0000000000000000000000000000000000000000000000000000000000004544 212.0
BYDH2_k127_4107595_13 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 - - 0.000000000000000000000000000000000000000000000005192 172.0
BYDH2_k127_4107595_14 Cytochrome P460 - - - 0.0000000000000000000000000000000000000002051 149.0
BYDH2_k127_4107595_15 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 0.000000000000548 68.0
BYDH2_k127_4107595_16 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 0.00000000004782 63.0
BYDH2_k127_4107595_17 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 0.0000007365 52.0
BYDH2_k127_4107595_2 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042 - 2.3.1.157,2.7.7.23 1.953e-257 798.0
BYDH2_k127_4107595_3 Belongs to the thiolase family K00626 - 2.3.1.9 1.542e-239 743.0
BYDH2_k127_4107595_4 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008564 553.0
BYDH2_k127_4107595_5 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001297 542.0
BYDH2_k127_4107595_6 transcriptional regulatory protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001633 459.0
BYDH2_k127_4107595_7 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 - 3.1.22.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002398 322.0
BYDH2_k127_4107595_8 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003263 305.0
BYDH2_k127_4107595_9 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002117 289.0
BYDH2_k127_4135224_0 Catalyzes cross-linking of the peptidoglycan cell wall K05515 - 3.4.16.4 0.0 1256.0
BYDH2_k127_4135224_1 Catalyzes the phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol K06131 - - 2.828e-243 753.0
BYDH2_k127_4135224_10 Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001317 495.0
BYDH2_k127_4135224_11 Branched-chain amino acid ATP-binding cassette transporter K06861 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000508 460.0
BYDH2_k127_4135224_12 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 - 2.5.1.129 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003098 397.0
BYDH2_k127_4135224_13 Belongs to the 5-formyltetrahydrofolate cyclo-ligase family K01934 - 6.3.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008234 383.0
BYDH2_k127_4135224_14 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003804 361.0
BYDH2_k127_4135224_15 Lipopolysaccharide-assembly, LptC-related K11719 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002623 346.0
BYDH2_k127_4135224_16 Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane K09774 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001487 343.0
BYDH2_k127_4135224_17 shape-determining protein MreD K03571 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003715 336.0
BYDH2_k127_4135224_18 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03092 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002717 323.0
BYDH2_k127_4135224_19 Flagellar hook-length control protein FliK - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005291 310.0
BYDH2_k127_4135224_2 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 8.984e-235 727.0
BYDH2_k127_4135224_20 PTS IIA-like nitrogen-regulatory protein PtsN K02806 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001702 245.0
BYDH2_k127_4135224_21 Involved in formation and maintenance of cell shape K03570 - - 0.00000000000000000000000000000000000000000000000000000000000000001975 227.0
BYDH2_k127_4135224_22 Uncharacterised BCR, YnfA/UPF0060 family K09771 - - 0.00000000000000000000000000000000000000000000000000000000000000006585 222.0
BYDH2_k127_4135224_23 Sigma 54 modulation protein K05808 - - 0.00000000000000000000000000000000000000000000000000000000008136 207.0
BYDH2_k127_4135224_24 PFAM Modulator of Rho-dependent transcription termination K19000 - - 0.000000000000000000000000000000000000000000001262 167.0
BYDH2_k127_4135224_25 FlhB HrpN YscU SpaS Family K04061 - - 0.00000000000000000000000002946 108.0
BYDH2_k127_4135224_26 FlhB HrpN YscU SpaS Family - - - 0.000000000009172 66.0
BYDH2_k127_4135224_3 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 1.073e-219 684.0
BYDH2_k127_4135224_4 TIGRFAM A G-specific adenine glycosylase K03575 - - 1.837e-219 683.0
BYDH2_k127_4135224_5 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine K07566 - 2.7.7.87 1.915e-205 641.0
BYDH2_k127_4135224_6 Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr) K06023 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001572 601.0
BYDH2_k127_4135224_7 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002207 567.0
BYDH2_k127_4135224_8 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03092 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003394 556.0
BYDH2_k127_4135224_9 Haloacid dehalogenase-like hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001455 505.0
BYDH2_k127_4172386_0 Peptidase family U32 C-terminal domain K08303 - - 2.626e-276 852.0
BYDH2_k127_4172386_1 Required for the activity of the bacterial periplasmic transport system of putrescine K02055,K11069 - - 3.644e-228 708.0
BYDH2_k127_4172386_2 PFAM alpha beta hydrolase K07019 - - 1.024e-212 662.0
BYDH2_k127_4172386_3 TIGRFAM DNA polymerase III, alpha subunit K02337 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004162 507.0
BYDH2_k127_4172386_4 Binding-protein-dependent transport system inner membrane component K11070 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000253 480.0
BYDH2_k127_4172386_5 hydrolase of the alpha beta superfamily K07018 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001104 386.0
BYDH2_k127_4172386_6 Ferredoxin - - - 0.000000000000000000000000000000000000000000000000000000000000001308 218.0
BYDH2_k127_4174035_0 von Willebrand factor, type A K02448 - - 0.0 1215.0
BYDH2_k127_4174035_1 Cytochrome c oxidase, subunit I K04561 - 1.7.2.5 1.277e-290 893.0
BYDH2_k127_4174035_2 MacB-like periplasmic core domain K02004 - - 2.077e-233 724.0
BYDH2_k127_4174035_3 CbbQ/NirQ/NorQ C-terminal K04748 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004884 535.0
BYDH2_k127_4174035_4 Belongs to the glutathione peroxidase family K00432 - 1.11.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003061 346.0
BYDH2_k127_4174035_5 Cytochrome c K02305 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004789 309.0
BYDH2_k127_4174035_6 Phosphate-selective porin O and P K07221 - - 0.000000000000000000000000000000000000000002218 155.0
BYDH2_k127_4174035_7 - - - - 0.0000000000000000000000000000000001294 134.0
BYDH2_k127_4174035_8 - - - - 0.00000000000000000000000000000002356 127.0
BYDH2_k127_4174035_9 Phosphate-selective porin O and P K07221 - - 0.0000000000000000000008969 94.0
BYDH2_k127_4312566_0 PFAM peptidase - - - 3.85e-283 871.0
BYDH2_k127_4312566_1 Glutaminyl-tRNA synthetase K01886 - 6.1.1.18 6.212e-260 803.0
BYDH2_k127_4312566_2 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 1.65e-219 683.0
BYDH2_k127_4312566_3 Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling K09001 - 2.7.1.170 7.964e-213 663.0
BYDH2_k127_4312566_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003494 447.0
BYDH2_k127_4312566_5 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006397 299.0
BYDH2_k127_4312566_6 Polymer-forming cytoskeletal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000009621 255.0
BYDH2_k127_4312566_7 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003402 247.0
BYDH2_k127_4312566_8 Required for insertion of 4Fe-4S clusters K15724 - - 0.00000000000000000000000000000000000000000000000000000000000000001286 225.0
BYDH2_k127_4312566_9 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 - 6.1.1.1 0.0000000000000000000000000000000000000000000003171 167.0
BYDH2_k127_4343417_0 PFAM Di-haem cytochrome c peroxidase - - - 0.0 1327.0
BYDH2_k127_4343417_1 Alginate export - - - 0.0 1028.0
BYDH2_k127_4343417_2 PFAM amidohydrolase - - - 1.444e-231 725.0
BYDH2_k127_4343417_3 Radical SAM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007184 546.0
BYDH2_k127_4343417_4 TatD related DNase K03424 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001475 503.0
BYDH2_k127_4343417_5 PEP-CTERM motif - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001121 468.0
BYDH2_k127_4343417_6 6-pyruvoyl tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004906 306.0
BYDH2_k127_4343417_7 PEP-CTERM motif - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009009 297.0
BYDH2_k127_4343417_8 Ankyrin repeat K06867 - - 0.000000000000000000000000000000000000000000000000000006958 192.0
BYDH2_k127_4343417_9 alpha/beta hydrolase fold - - - 0.00000000000000000000000002799 108.0
BYDH2_k127_4475465_0 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 - 2.4.1.21 1.474e-307 944.0
BYDH2_k127_4475465_1 Cytochrome c - - - 7.265e-302 926.0
BYDH2_k127_4475465_2 Belongs to the GPI family K01810 - 5.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000004093 240.0
BYDH2_k127_4492072_0 Tetratricopeptide repeat - - - 0.0 1080.0
BYDH2_k127_4492072_1 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 1.591e-311 955.0
BYDH2_k127_4492072_10 PFAM Filamentation induced by cAMP death on - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005849 362.0
BYDH2_k127_4492072_11 Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell K03608 - - 0.00000000000000000000000000000000000000000000001214 172.0
BYDH2_k127_4492072_2 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 1.793e-235 729.0
BYDH2_k127_4492072_3 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 8.366e-197 614.0
BYDH2_k127_4492072_4 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 - 2.7.1.148 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001439 539.0
BYDH2_k127_4492072_5 Belongs to the ParA family K03609 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008368 522.0
BYDH2_k127_4492072_6 Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization K03610 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005537 467.0
BYDH2_k127_4492072_7 Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein K02494 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004979 419.0
BYDH2_k127_4492072_8 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002427 394.0
BYDH2_k127_4492072_9 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 - 3.1.1.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001528 390.0
BYDH2_k127_4540682_0 intramolecular transferase activity, transferring amino groups K01845 - 5.4.3.8 5.41e-275 847.0
BYDH2_k127_4540682_1 Methionine aminopeptidase K01265 GO:0003674,GO:0003824,GO:0004177,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008198,GO:0008233,GO:0008235,GO:0008237,GO:0008238,GO:0009987,GO:0016787,GO:0019538,GO:0036211,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0070006,GO:0070011,GO:0070084,GO:0071704,GO:0140096,GO:1901564 3.4.11.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001002 552.0
BYDH2_k127_4540682_2 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 - 2.7.7.56 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002837 476.0
BYDH2_k127_4540682_3 Cytochrome c, class I - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005365 390.0
BYDH2_k127_4540682_4 restriction endonuclease K07448 GO:0001101,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006725,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009295,GO:0009415,GO:0009628,GO:0009987,GO:0010035,GO:0015666,GO:0016787,GO:0016788,GO:0032067,GO:0034641,GO:0042221,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043590,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051599,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901700 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005867 379.0
BYDH2_k127_4540682_5 PFAM Sporulation domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004169 358.0
BYDH2_k127_4540682_6 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 - 3.6.1.66 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002197 304.0
BYDH2_k127_4594189_0 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 0.0 1069.0
BYDH2_k127_4594189_1 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 0.0 1003.0
BYDH2_k127_4594189_10 RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs K03666 - - 0.000000000000000000000000000000000000000009582 154.0
BYDH2_k127_4594189_11 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.000000000000000000000000004173 110.0
BYDH2_k127_4594189_2 HflC and HflK could encode or regulate a protease K04088 - - 5.637e-240 743.0
BYDH2_k127_4594189_3 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 3.169e-213 666.0
BYDH2_k127_4594189_4 PFAM Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 4.347e-212 661.0
BYDH2_k127_4594189_5 HflC and HflK could regulate a protease K04087 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002933 550.0
BYDH2_k127_4594189_6 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005989 502.0
BYDH2_k127_4594189_7 Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage K08311 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007755 385.0
BYDH2_k127_4594189_8 Thioredoxin-like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008425 300.0
BYDH2_k127_4594189_9 Transglycosylase SLT domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003089 251.0
BYDH2_k127_4704930_0 PFAM Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase K13924 - 2.1.1.80,3.1.1.61 3.046e-316 974.0
BYDH2_k127_4704930_1 DeoC/LacD family aldolase K11645 - 4.1.2.13 5.881e-224 694.0
BYDH2_k127_4704930_2 Histidine kinase K07675 - 2.7.13.3 9.417e-194 611.0
BYDH2_k127_4704930_3 Sel1-like repeats. K07126 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001245 426.0
BYDH2_k127_4704930_4 Ankyrin repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002565 425.0
BYDH2_k127_4704930_5 response regulator K02282,K07689 - - 0.000000000000000000000000000000000001832 147.0
BYDH2_k127_4759244_0 HELICc2 K03722 - 3.6.4.12 0.0 1223.0
BYDH2_k127_4759244_1 Signal transduction histidine kinase, subgroup 1, dimerisation phosphoacceptor K02668 - 2.7.13.3 0.0 998.0
BYDH2_k127_4759244_10 Belongs to the bacterial ribosomal protein bL27 family K02899 - - 0.00000000000000000000000000000000000000000000003987 169.0
BYDH2_k127_4759244_11 Belongs to the UPF0125 (RnfH) family K09801 - - 0.00000000000000000000000000000000000000000001072 164.0
BYDH2_k127_4759244_12 - K06950 - - 0.00000000000000000000000000000000000000649 145.0
BYDH2_k127_4759244_13 Transposase DDE domain - - - 0.0000000000008772 67.0
BYDH2_k127_4759244_2 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate K00931 - 2.7.2.11 6.905e-224 695.0
BYDH2_k127_4759244_3 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 2.889e-218 678.0
BYDH2_k127_4759244_4 Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group K02259 - - 7.829e-209 650.0
BYDH2_k127_4759244_5 Belongs to the FPP GGPP synthase family K02523 - 2.5.1.90 2.706e-195 610.0
BYDH2_k127_4759244_6 response regulator receiver K02667 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005928 456.0
BYDH2_k127_4759244_7 Polyketide cyclase / dehydrase and lipid transport - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004699 311.0
BYDH2_k127_4759244_8 Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene K03664 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001176 290.0
BYDH2_k127_4759244_9 This protein binds to 23S rRNA in the presence of protein L20 K02888 - - 0.00000000000000000000000000000000000000000000000000000002813 199.0
BYDH2_k127_4764726_0 - - - - 0.000000000000000000000000000000000000000000000000000000001611 209.0
BYDH2_k127_4764726_1 - - - - 0.00000000000000000000000000000000000000000000000001337 181.0
BYDH2_k127_4764726_2 Putative transposase - - - 0.00000000000000000001208 93.0
BYDH2_k127_4764726_3 PFAM Transposase, IS4-like - - - 0.00000005577 54.0
BYDH2_k127_4859110_0 PFAM TonB-dependent receptor, beta-barrel - - - 0.0 1591.0
BYDH2_k127_4859110_1 Metallo-peptidase family M12B Reprolysin-like - - - 6.292e-294 907.0
BYDH2_k127_4859110_10 Phosphate-starvation-inducible E - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004051 255.0
BYDH2_k127_4859110_11 Rhodanese-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000309 247.0
BYDH2_k127_4859110_12 PFAM Biopolymer transport protein ExbD TolR K03559 - - 0.0000000000000000000000000000000000000000000000000000000000000000001731 231.0
BYDH2_k127_4859110_13 sequence-specific DNA binding - - - 0.0001134 46.0
BYDH2_k127_4859110_2 Amino acid permease - - - 4.098e-292 901.0
BYDH2_k127_4859110_3 Protein tyrosine kinase K08282 - 2.7.11.1 2.94e-237 743.0
BYDH2_k127_4859110_4 PFAM MotA TolQ ExbB proton channel K03561 - - 8.421e-220 691.0
BYDH2_k127_4859110_5 TPR repeat - - - 3.379e-215 672.0
BYDH2_k127_4859110_6 TIGRFAM Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB K07657 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003061 455.0
BYDH2_k127_4859110_7 Protein of unknown function (DUF3450) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001398 415.0
BYDH2_k127_4859110_8 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000074 366.0
BYDH2_k127_4859110_9 PFAM MotA TolQ ExbB proton channel K03561 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007913 337.0
BYDH2_k127_4894375_0 His Kinase A (phosphoacceptor) domain - - - 1.242e-282 871.0
BYDH2_k127_4894375_1 CobW/HypB/UreG, nucleotide-binding domain K04652 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004249 563.0
BYDH2_k127_4894375_10 cheY-homologous receiver domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001128 252.0
BYDH2_k127_4894375_11 Probably plays a role in a hydrogenase nickel cofactor insertion step K04651 - - 0.000000000000000000000000000000000000000000000000000000000002225 209.0
BYDH2_k127_4894375_2 Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress K04083 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001365 557.0
BYDH2_k127_4894375_3 TPM domain K06872 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009574 475.0
BYDH2_k127_4894375_4 Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide K04656 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004294 411.0
BYDH2_k127_4894375_5 LemA family K03744 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004867 384.0
BYDH2_k127_4894375_6 Competence protein ComEC Rec2 K02238 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004074 331.0
BYDH2_k127_4894375_7 HupE UreJ protein K03192 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000243 330.0
BYDH2_k127_4894375_8 TPM domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006422 303.0
BYDH2_k127_4894375_9 hydrogenase maturation protease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005967 262.0
BYDH2_k127_4900948_0 Biotin-lipoyl like K01993,K16922 - - 0.0 1475.0
BYDH2_k127_4900948_1 Dynamin family - - - 1.007e-305 938.0
BYDH2_k127_4900948_10 glycerol-3-phosphate dehydrogenase [NAD(P)+] activity K00057 - 1.1.1.94 0.0000000002899 61.0
BYDH2_k127_4900948_2 Outer membrane efflux protein K18139 - - 8.261e-288 886.0
BYDH2_k127_4900948_3 Bacterial protein of unknown function (DUF839) K07093 - - 1.244e-262 813.0
BYDH2_k127_4900948_4 Belongs to the GcvT family K06980 - - 4.615e-213 664.0
BYDH2_k127_4900948_5 Protein of unknown function (DUF502) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007548 460.0
BYDH2_k127_4900948_6 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001651 357.0
BYDH2_k127_4900948_7 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001148 259.0
BYDH2_k127_4900948_8 - K19168 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004301 256.0
BYDH2_k127_4997736_0 Molybdopterin oxidoreductase Fe4S4 domain K00336 - 1.6.5.3 0.0 1480.0
BYDH2_k127_4997736_1 chain 5 L K00341 - 1.6.5.3 0.0 1234.0
BYDH2_k127_4997736_10 Belongs to the complex I subunit 6 family K00339 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001844 361.0
BYDH2_k127_4997736_11 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003362 338.0
BYDH2_k127_4997736_12 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001973 336.0
BYDH2_k127_4997736_13 Thioredoxin-like [2Fe-2S] ferredoxin K00334 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009599 316.0
BYDH2_k127_4997736_14 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000002201 235.0
BYDH2_k127_4997736_15 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 - 1.6.5.3 0.0000000000000000000000000000000000000000000000001058 178.0
BYDH2_k127_4997736_16 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated K00567 - 2.1.1.63 0.000000000000000000003298 99.0
BYDH2_k127_4997736_17 BNR repeat-like domain - - - 0.0002646 46.0
BYDH2_k127_4997736_2 Molecular chaperone. Has ATPase activity K04079 - - 0.0 1173.0
BYDH2_k127_4997736_3 NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 4.704e-311 954.0
BYDH2_k127_4997736_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 - 1.6.5.3 2.263e-293 899.0
BYDH2_k127_4997736_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 2.029e-287 885.0
BYDH2_k127_4997736_6 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 5.665e-280 860.0
BYDH2_k127_4997736_7 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 3.812e-226 703.0
BYDH2_k127_4997736_8 Tyrosine recombinase XerD K04763 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006894 576.0
BYDH2_k127_4997736_9 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000143 388.0
BYDH2_k127_5121988_0 type II secretion system protein E K02454 - - 3.26e-245 761.0
BYDH2_k127_5121988_1 Patatin-like phospholipase K07001 - - 6.604e-244 754.0
BYDH2_k127_5121988_2 Belongs to the peptidase S33 family K01259 - 3.4.11.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002164 474.0
BYDH2_k127_5121988_3 PFAM Integral membrane protein TerC - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009937 436.0
BYDH2_k127_5121988_4 Belongs to the universal stress protein A family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006506 273.0
BYDH2_k127_5121988_5 cAMP phosphodiesterases class-II K01120 - 3.1.4.17 0.0000000000000000000000000000000000000000000000000000000000000000000000001706 248.0
BYDH2_k127_5121988_6 - - - - 0.000000000000000000000000007658 112.0
BYDH2_k127_5122386_0 Cell wall hydrolase autolysin K01448 - 3.5.1.28 5.12e-268 830.0
BYDH2_k127_5122386_1 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 3.369e-258 797.0
BYDH2_k127_5122386_10 small periplasmic lipoprotein - - - 0.000000000004374 66.0
BYDH2_k127_5122386_2 PFAM Squalene phytoene synthase K00801 - 2.5.1.21 2.446e-218 679.0
BYDH2_k127_5122386_3 Permease MlaE K02066 - - 7.011e-217 676.0
BYDH2_k127_5122386_4 NmrA-like family K00091 - 1.1.1.219 4.003e-204 636.0
BYDH2_k127_5122386_5 MlaD protein K02067 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001052 547.0
BYDH2_k127_5122386_6 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K18979 - 1.17.99.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001142 451.0
BYDH2_k127_5122386_7 AAA domain, putative AbiEii toxin, Type IV TA system K02065 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004318 350.0
BYDH2_k127_5122386_8 ABC-type transport auxiliary lipoprotein component K18480 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001498 335.0
BYDH2_k127_5122386_9 Threonylcarbamoyl adenosine biosynthesis protein TsaE K06925 - - 0.0000000000000000000000000000000000000000001753 164.0
BYDH2_k127_5134143_0 Cytidylyltransferase-like - - - 6.299e-305 938.0
BYDH2_k127_5134143_1 2Fe-2S -binding K02192 - - 0.0000000000000000000000000004554 114.0
BYDH2_k127_5134143_2 Haemolysin-type calcium-binding repeat (2 copies) - - - 0.000000000000000000000000001433 113.0
BYDH2_k127_5134143_3 Thioredoxin-like domain K03671,K03672 - 1.8.1.8 0.0000000000005034 71.0
BYDH2_k127_5265420_0 TIGRFAM ATPase, P-type, K Mg Cd Cu Zn Na Ca Na H-transporter K01537 - 3.6.3.8 0.0 1014.0
BYDH2_k127_5265420_1 Pyridine nucleotide-disulphide oxidoreductase K17218 - 1.8.5.4 1.494e-294 909.0
BYDH2_k127_5265420_2 membrane transporter protein K07090 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006851 388.0
BYDH2_k127_5265420_3 Tyrosine phosphatase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003218 325.0
BYDH2_k127_5265420_4 Sulphur transport K07112 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004518 251.0
BYDH2_k127_5265420_5 transporter component K07112 - - 0.000000000000000000000000000000000000000000000000000000000007093 210.0
BYDH2_k127_5265420_6 transcriptional regulator, ArsR - - - 0.0000000000000000000000000000000000000000000000000000005954 193.0
BYDH2_k127_5300189_0 PFAM Peptidase M16 K07263 - - 4.097e-257 795.0
BYDH2_k127_5300189_1 HDOD domain - - - 5.409e-249 771.0
BYDH2_k127_5300189_2 PFAM Type II secretion system protein E K02669,K12203 - - 9.246e-217 674.0
BYDH2_k127_5300189_3 PFAM Metal-dependent hydrolase HDOD - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006865 526.0
BYDH2_k127_5300189_4 type II secretion system protein E K02670 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001032 441.0
BYDH2_k127_5300189_5 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle K01595 - 4.1.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001851 345.0
BYDH2_k127_5300189_6 Conserved hypothetical protein 95 K08316 - 2.1.1.171 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003715 339.0
BYDH2_k127_5300189_7 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.000000000000000000000000000000000000000000000000000000000000000001098 230.0
BYDH2_k127_5300189_8 4Fe-4S binding domain - - - 0.00000000000000000000000000000000000000000000000007488 177.0
BYDH2_k127_531366_0 Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis K03688 - - 9.52e-246 770.0
BYDH2_k127_531366_1 Metallo-peptidase family M12B Reprolysin-like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003079 310.0
BYDH2_k127_531366_2 Transposase and inactivated derivatives K07486 - - 0.00000000000000000000000000000003483 126.0
BYDH2_k127_531366_3 COG3316 Transposase and inactivated derivatives K07498 - - 0.000000000000000000004099 93.0
BYDH2_k127_531366_4 BNR repeat-like domain - - - 0.0000000001249 63.0
BYDH2_k127_531366_5 Transposase and inactivated derivatives - - - 0.00004802 47.0
BYDH2_k127_5364528_0 PFAM binding-protein-dependent transport systems inner membrane component K02034 - - 7.281e-307 943.0
BYDH2_k127_5364528_1 Belongs to the ABC transporter superfamily K02031,K02032 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002015 394.0
BYDH2_k127_5364528_2 - - - - 0.00000000000000000000000007081 108.0
BYDH2_k127_5395475_0 DDE superfamily endonuclease - - - 0.0000000000000000000000000000000000000126 147.0
BYDH2_k127_5395475_1 Sel1 domain protein repeat-containing protein K07126 - - 0.00002191 47.0
BYDH2_k127_5398298_0 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007 - 2.7.9.2 0.0 1459.0
BYDH2_k127_5398298_1 Bacterial regulatory helix-turn-helix protein, lysR family K21703 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007559 584.0
BYDH2_k127_5572028_0 von Willebrand factor, type A - - - 0.0 1308.0
BYDH2_k127_5572028_1 RuBisCO catalyzes two reactions the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site K01601 - 4.1.1.39 9.158e-250 770.0
BYDH2_k127_5572028_2 CbbQ/NirQ/NorQ C-terminal K04748 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007966 545.0
BYDH2_k127_5572028_3 ribulose bisphosphate carboxylase, small chain K01602 - 4.1.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000002086 250.0
BYDH2_k127_5615607_0 PFAM Peptidase S45, penicillin amidase K01434 - 3.5.1.11 0.0 1425.0
BYDH2_k127_5615607_1 Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02400 - - 0.0 1283.0
BYDH2_k127_5615607_10 FlgN protein K02399 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004259 269.0
BYDH2_k127_5615607_11 PFAM Anti-sigma-28 factor, FlgM K02398 - - 0.00000000000000000000000000000000000000000000000000006674 187.0
BYDH2_k127_5615607_2 signal recognition particle SRP54 K02404 - - 1.73e-246 764.0
BYDH2_k127_5615607_3 Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02401 - - 4.46e-217 677.0
BYDH2_k127_5615607_4 MotA/TolQ/ExbB proton channel family K02556 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001466 483.0
BYDH2_k127_5615607_5 Protein of unknown function (DUF3025) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001644 479.0
BYDH2_k127_5615607_6 Membrane MotB of proton-channel complex MotA/MotB K02557 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007687 465.0
BYDH2_k127_5615607_7 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes K02405 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002349 461.0
BYDH2_k127_5615607_8 Etoposide-induced protein 2.4 (EI24) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002784 427.0
BYDH2_k127_5615607_9 Belongs to the ParA family K04562 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002924 384.0
BYDH2_k127_5641737_0 Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end K02407 - - 0.0 1054.0
BYDH2_k127_5641737_1 Flagellar hook-length control protein FliK - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001092 524.0
BYDH2_k127_5641737_2 flagellar protein FliS K02422 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001258 255.0
BYDH2_k127_5641737_3 Flagellar protein FliT K02423 - - 0.0000000000000000000000000000000000000000000000000000000000007457 210.0
BYDH2_k127_5641737_4 PFAM Flagellar protein FlaG protein K06603 - - 0.00000000000000000000000000000000000000003119 155.0
BYDH2_k127_5675462_0 Belongs to the DEAD box helicase family - GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008026,GO:0008104,GO:0008150,GO:0008186,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032991,GO:0033036,GO:0035770,GO:0036464,GO:0042623,GO:0043186,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044424,GO:0044444,GO:0044464,GO:0045495,GO:0051179,GO:0060293,GO:0070035,GO:0140098,GO:1990904 - 2.184e-288 887.0
BYDH2_k127_5675462_1 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 - 6.1.1.1 3.495e-205 639.0
BYDH2_k127_5675462_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002067 489.0
BYDH2_k127_5675462_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003663 358.0
BYDH2_k127_5675462_4 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 0.0000000000000000000000000000000000000000000000000000000000000001469 221.0
BYDH2_k127_5735748_0 Outer membrane efflux protein - - - 0.0 1287.0
BYDH2_k127_5735748_1 PFAM Glycosyl transferase, family 2 K11936 - - 0.00000000000000000000000000000000000000000000001917 170.0
BYDH2_k127_5749575_0 MMPL family K07003 - - 0.0 1544.0
BYDH2_k127_5749575_1 Selenide, water dikinase K01008 - 2.7.9.3 0.0 1330.0
BYDH2_k127_5749575_10 NmrA-like family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000337 563.0
BYDH2_k127_5749575_11 Plays a role in the flagellum-specific transport system K02419 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008077 482.0
BYDH2_k127_5749575_12 Role in flagellar biosynthesis K02421 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004079 468.0
BYDH2_k127_5749575_13 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000166 404.0
BYDH2_k127_5749575_14 Protein of unknown function (DUF3108) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001518 396.0
BYDH2_k127_5749575_15 Papain family cysteine protease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002429 375.0
BYDH2_k127_5749575_16 MlaC protein K07323 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004379 353.0
BYDH2_k127_5749575_17 Flagellar motor switch K02417,K03225 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000454 287.0
BYDH2_k127_5749575_18 Controls the rotational direction of flagella during chemotaxis K02415 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003969 272.0
BYDH2_k127_5749575_19 PFAM Transposase IS200 like K07491 - - 0.00000000000000000000000000000000000000000000000000000000000001608 217.0
BYDH2_k127_5749575_2 AMP-dependent synthetase K00666 - - 0.0 1183.0
BYDH2_k127_5749575_20 Peptidoglycan-binding domain 1 protein - - - 0.0000000000000000000000000000000000000000000000000000000000001414 216.0
BYDH2_k127_5749575_21 Role in flagellar biosynthesis K02420 - - 0.0000000000000000000000000000000000000000000007985 166.0
BYDH2_k127_5749575_22 Phosphopantetheine attachment site - - - 0.00000000000000000000000000000000000000002357 153.0
BYDH2_k127_5749575_23 flagellar biosynthesis protein K02418 - - 0.00000000000000000000000000000000005417 138.0
BYDH2_k127_5749575_24 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00819 - 2.6.1.13 0.00000000000000000002364 91.0
BYDH2_k127_5749575_25 glycosyl transferase, family 2 - - - 0.00002569 47.0
BYDH2_k127_5749575_3 Membrane - - - 2.695e-268 837.0
BYDH2_k127_5749575_4 Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB NOP family K03500 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0031974,GO:0031981,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0046483,GO:0070013,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:1901360 2.1.1.176 1.693e-265 819.0
BYDH2_k127_5749575_5 PFAM aminotransferase, class I K00652 - 2.3.1.47 1.381e-250 774.0
BYDH2_k127_5749575_6 Domain of unknown function (DUF3463) - - - 2.968e-248 766.0
BYDH2_k127_5749575_7 Phosphoribosylformylglycinamidine cyclo-ligase K01933 - 6.3.3.1 1.023e-218 679.0
BYDH2_k127_5749575_8 Catalyzes the transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA K06917 - - 3.129e-208 650.0
BYDH2_k127_5749575_9 flagellar motor switch protein FliM K02416 - - 9.35e-199 620.0
BYDH2_k127_5769645_0 Uncharacterized protein conserved in bacteria (DUF2309) K09822 - - 0.0 1888.0
BYDH2_k127_5769645_1 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus - - - 1.398e-211 663.0
BYDH2_k127_5769645_2 Proton-conducting membrane transporter K00342 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000003086 256.0
BYDH2_k127_5799499_0 Nickel-dependent hydrogenase K00436 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 1.12.1.2 3.238e-279 861.0
BYDH2_k127_5799499_1 NADH ubiquinone oxidoreductase, 20 Kd subunit K18007 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 1.12.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001602 361.0
BYDH2_k127_5799499_3 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.00008558 47.0
BYDH2_k127_5799499_4 PFAM Transposase IS200 like - - - 0.0002962 43.0
BYDH2_k127_5838765_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 GO:0000166,GO:0003674,GO:0003824,GO:0004748,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005971,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009262,GO:0009263,GO:0009987,GO:0016491,GO:0016725,GO:0016728,GO:0018130,GO:0019438,GO:0019637,GO:0032991,GO:0034641,GO:0034654,GO:0036094,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046483,GO:0055086,GO:0055114,GO:0061731,GO:0071704,GO:0090407,GO:0097159,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902494,GO:1990204 1.17.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000004717 238.0
BYDH2_k127_5838765_1 Tetratricopeptide repeat - - - 0.000000000000000000000000422 113.0
BYDH2_k127_5897147_0 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 0.0 1481.0
BYDH2_k127_5897147_1 Belongs to the glycosyl hydrolase 57 family K22451 - 2.4.1.25 0.0 1343.0
BYDH2_k127_5897147_2 Belongs to the glycosyl hydrolase 57 family - - - 0.0 1097.0
BYDH2_k127_5897147_3 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 9.118e-272 838.0
BYDH2_k127_5897147_4 PFAM Transposase, IS4-like - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006533 349.0
BYDH2_k127_5897147_5 ParE toxin of type II toxin-antitoxin system, parDE - - - 0.00000000000000000000001698 99.0
BYDH2_k127_5897147_6 Belongs to the GPI family K01810 - 5.3.1.9 0.000008864 48.0
BYDH2_k127_5897147_7 PFAM Chemotaxis methyl-accepting receptor, signalling K03406,K03776,K05874 - - 0.0005401 43.0
BYDH2_k127_591113_0 Chromate transporter K07240 - - 8.327e-287 882.0
BYDH2_k127_591113_1 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 6.204e-235 729.0
BYDH2_k127_591113_2 Dak2 K00863,K05878 - 2.7.1.121,2.7.1.28,2.7.1.29,4.6.1.15 7.083e-204 637.0
BYDH2_k127_591113_3 NADH ubiquinone oxidoreductase complex i intermediate-associated protein 30 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006217 386.0
BYDH2_k127_591113_4 Chromate resistance - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003512 352.0
BYDH2_k127_591113_5 Chromate resistance - - - 0.0000000000000000000000000000000000000000000000000000000000000001067 223.0
BYDH2_k127_591113_6 Dak2 K00863,K05878 - 2.7.1.121,2.7.1.28,2.7.1.29,4.6.1.15 0.000000000000000000000000000007953 123.0
BYDH2_k127_591113_7 Dak2 K00863,K05878 - 2.7.1.121,2.7.1.28,2.7.1.29,4.6.1.15 0.0000000000000000000000000006105 114.0
BYDH2_k127_591113_8 HDOD domain - - - 0.000000000000001074 80.0
BYDH2_k127_6000579_0 DNA polymerase X family K02347 - - 0.0 1115.0
BYDH2_k127_6000579_1 tRNA-splicing ligase RtcB K14415 - 6.5.1.3 5.517e-308 945.0
BYDH2_k127_6000579_2 Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP K00763 - 6.3.4.21 1.744e-217 676.0
BYDH2_k127_6000579_3 Sigma 54 modulation protein / S30EA ribosomal protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001208 367.0
BYDH2_k127_6000579_4 Isochorismatase family K08281 - 3.5.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005545 366.0
BYDH2_k127_6000579_5 Archease protein family (MTH1598/TM1083) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001425 271.0
BYDH2_k127_6068087_0 AcrB/AcrD/AcrF family K03296,K18138 - - 0.0 1889.0
BYDH2_k127_6068087_1 Belongs to the peptidase S16 family - - - 0.0 1503.0
BYDH2_k127_6068087_10 PFAM multicopper oxidase type 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007647 597.0
BYDH2_k127_6068087_11 Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP K01525 - 3.6.1.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001205 525.0
BYDH2_k127_6068087_12 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008839,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016627,GO:0016628,GO:0019752,GO:0019877,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576 1.17.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002584 506.0
BYDH2_k127_6068087_13 Belongs to the dGTPase family. Type 2 subfamily K01129 - 3.1.5.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004952 505.0
BYDH2_k127_6068087_14 Predicted integral membrane protein (DUF2269) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001527 359.0
BYDH2_k127_6068087_15 low molecular weight K03741 - 1.20.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008131 303.0
BYDH2_k127_6068087_16 endonuclease K07451 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007421 293.0
BYDH2_k127_6068087_17 Transcriptional regulatory protein, C terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002348 268.0
BYDH2_k127_6068087_18 PFAM Arsenical resistance operon trans-acting repressor ArsD - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001675 239.0
BYDH2_k127_6068087_19 Regulatory protein ArsR K03892 - - 0.00000000000000000000000000000000000000000000000000000000287 201.0
BYDH2_k127_6068087_2 PFAM Multicopper oxidase, type - - - 0.0 1113.0
BYDH2_k127_6068087_20 Phosphate acyltransferases K00655 - 2.3.1.51 0.0000000000000000000000000000000000000000000000000001601 195.0
BYDH2_k127_6068087_21 PFAM Glyoxalase bleomycin resistance protein dioxygenase - - - 0.0000000000000000000000000000000000000001995 149.0
BYDH2_k127_6068087_22 Universal stress protein family - - - 0.0000000000000000000000000000000008277 136.0
BYDH2_k127_6068087_23 PFAM Glyoxalase bleomycin resistance protein dioxygenase - - - 0.0000000000000000000000000001798 117.0
BYDH2_k127_6068087_24 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K06186 - - 0.00002287 46.0
BYDH2_k127_6068087_3 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735,K13829 - 2.7.1.71,4.2.3.4 0.0 1071.0
BYDH2_k127_6068087_4 SMART ATPase, AAA type, core K01551 - 3.6.3.16 5.653e-270 835.0
BYDH2_k127_6068087_5 Signal transduction histidine kinase, subgroup 1, dimerisation phosphoacceptor - - - 4.085e-247 766.0
BYDH2_k127_6068087_6 Involved in arsenical resistance. Thought to form the channel of an arsenite pump K03893 - - 6.96e-240 745.0
BYDH2_k127_6068087_7 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 - 4.1.1.37 2.141e-232 719.0
BYDH2_k127_6068087_8 Sulfate permease family - - - 6.003e-209 659.0
BYDH2_k127_6068087_9 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585,K18094 - - 5.885e-206 647.0
BYDH2_k127_60699_0 Alpha amylase, catalytic domain K01176 - 3.2.1.1 0.0 1217.0
BYDH2_k127_60699_1 amine dehydrogenase activity - - - 6.327e-250 792.0
BYDH2_k127_60699_2 cysteine protease - - - 1.773e-196 615.0
BYDH2_k127_60699_3 Belongs to the pseudomonas-type ThrB family K02204 - 2.7.1.39 6.796e-194 606.0
BYDH2_k127_60699_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005547 520.0
BYDH2_k127_60699_5 Cytokinin riboside 5'-monophosphate phosphoribohydrolase K06966 - 3.2.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007445 484.0
BYDH2_k127_60699_6 Protein of unknown function (DUF2782) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000008393 247.0
BYDH2_k127_60699_7 - - - - 0.0000000000000000000000000000000000000000000000000000000003344 204.0
BYDH2_k127_60699_8 ABC-2 family transporter protein - - - 0.0000007159 52.0
BYDH2_k127_6107895_0 PFAM glycosyl transferase, family 35 K00688 - 2.4.1.1 0.0 1442.0
BYDH2_k127_6107895_1 Bacterial protein of unknown function (DUF853) K06915 - - 7.282e-302 929.0
BYDH2_k127_6107895_2 Belongs to the bacterial glucokinase family K00845 - 2.7.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008264 601.0
BYDH2_k127_6107895_3 PFAM Glyoxalase bleomycin resistance protein dioxygenase - - - 0.00000000000000000000000000000000000000000206 158.0
BYDH2_k127_6114648_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0 1621.0
BYDH2_k127_6114648_1 NlpB/DapX lipoprotein K07287 - - 4.877e-229 711.0
BYDH2_k127_6114648_2 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005417 579.0
BYDH2_k127_6114648_3 SMART Diguanylate phosphodiesterase - - - 0.0000000000000000000000000000000000000000000000000000000000002053 212.0
BYDH2_k127_6131678_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.0 1156.0
BYDH2_k127_6131678_1 FAD linked oxidases, C-terminal domain K00102,K00104,K03777 - 1.1.2.4,1.1.3.15,1.1.5.12 1.509e-317 972.0
BYDH2_k127_6131678_2 4Fe-4S double cluster binding domain K11473 - - 4.429e-259 799.0
BYDH2_k127_6131678_3 SMART Peptidoglycan-binding Lysin subgroup K16291 - - 1.566e-220 687.0
BYDH2_k127_6131678_4 FAD linked oxidase K00104,K11472 - 1.1.3.15 7.792e-199 623.0
BYDH2_k127_6131678_5 Carotenoid biosynthesis protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002515 567.0
BYDH2_k127_6131678_6 Asparaginase K01424,K13051 - 3.4.19.5,3.5.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004806 565.0
BYDH2_k127_6131678_7 PFAM 6-phosphogluconate dehydrogenase, NAD-binding K00042 - 1.1.1.60 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001496 556.0
BYDH2_k127_6131678_8 PFAM Transposase, IS4-like - - - 0.000000000000000000000000000000000000000000003763 163.0
BYDH2_k127_622227_0 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 0.0 1171.0
BYDH2_k127_622227_1 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 3.489e-268 828.0
BYDH2_k127_622227_10 FR47-like protein - - - 0.0000000000000699 71.0
BYDH2_k127_622227_2 Belongs to the 'phage' integrase family. XerC subfamily K03733 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002625 557.0
BYDH2_k127_622227_3 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008837,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016053,GO:0016853,GO:0016854,GO:0016855,GO:0019752,GO:0036361,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0047661,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.1.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000596 534.0
BYDH2_k127_622227_4 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 - 3.4.25.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007928 335.0
BYDH2_k127_622227_5 Protein of unknown function, DUF484 K09921 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007478 292.0
BYDH2_k127_622227_6 Nudix hydrolase K08310 - 3.6.1.67 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006407 274.0
BYDH2_k127_622227_7 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003269 256.0
BYDH2_k127_622227_8 FR47-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000001607 214.0
BYDH2_k127_622227_9 Putative regulatory protein - - - 0.000000000000000000000000000000000000000002575 157.0
BYDH2_k127_6401471_0 MOFRL family K11529 - 2.7.1.165 5.094e-239 744.0
BYDH2_k127_6401471_1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 6.166e-231 715.0
BYDH2_k127_6401471_2 Protein of unknown function (DUF2806) - - - 0.0000000000000000009166 86.0
BYDH2_k127_6449561_0 decarboxylase - - - 7.758e-284 873.0
BYDH2_k127_6449561_1 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346,K03502 GO:0000731,GO:0003674,GO:0003824,GO:0003887,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0006139,GO:0006259,GO:0006281,GO:0006301,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016604,GO:0016607,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019985,GO:0031974,GO:0031981,GO:0032991,GO:0033554,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0035770,GO:0036464,GO:0042276,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0070013,GO:0071704,GO:0071897,GO:0090304,GO:0140097,GO:1901360,GO:1901362,GO:1901576,GO:1990904 2.7.7.7 3.971e-214 668.0
BYDH2_k127_6449561_2 D-isomer specific 2-hydroxyacid dehydrogenase K00018,K00058 - 1.1.1.29,1.1.1.399,1.1.1.95 2.178e-203 634.0
BYDH2_k127_6449561_3 PFAM Type IV pilus assembly PilZ - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000225 493.0
BYDH2_k127_6449561_4 PFAM Abortive infection protein K07052 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008359 439.0
BYDH2_k127_6449561_5 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length K04760 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008275 361.0
BYDH2_k127_6449561_6 Belongs to the UPF0225 family K09858 - - 0.00000000000000000000000000000000000000000000000000000000000000000001279 234.0
BYDH2_k127_6449561_7 - - - - 0.000000000000000000000000000000000000000000000000000000000004293 208.0
BYDH2_k127_6449561_8 Small Multidrug Resistance protein K03297 - - 0.0000000000000000000000000000000000000000000000000000001376 196.0
BYDH2_k127_649458_0 Competence protein ComEC Rec2 K02238 - - 0.0 1373.0
BYDH2_k127_649458_1 PFAM Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase K13924 - 2.1.1.80,3.1.1.61 5.759e-313 963.0
BYDH2_k127_6579698_0 ABC transporter transmembrane region K12536 - - 0.0 1078.0
BYDH2_k127_6579698_1 Acetyltransferase (GNAT) domain - - - 0.0 1076.0
BYDH2_k127_6579698_10 TIGRFAM Type I secretion membrane fusion protein, HlyD K02022,K12537,K12542 - - 0.00000000000000000000000000000000000000000000000000000006336 196.0
BYDH2_k127_6579698_11 transferase activity, transferring glycosyl groups K00745,K12988,K18704 - 2.4.1.166,2.7.8.14,2.7.8.47 0.000000000000000000000000000000000000000000000002177 184.0
BYDH2_k127_6579698_12 COG0438 Glycosyltransferase - - - 0.0000000000000000000000000000008379 142.0
BYDH2_k127_6579698_2 SMART ATPase, AAA type, core K09691 - - 5.014e-213 668.0
BYDH2_k127_6579698_3 Glycosyltransferase like family 2 K20444 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001844 610.0
BYDH2_k127_6579698_4 Glycosyltransferase like family K07011 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006826 516.0
BYDH2_k127_6579698_5 Glycosyltransferase like family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007496 499.0
BYDH2_k127_6579698_6 Transport permease protein K09690 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001311 496.0
BYDH2_k127_6579698_7 transferase activity, transferring glycosyl groups - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001815 379.0
BYDH2_k127_6579698_8 Epimerase dehydratase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001136 327.0
BYDH2_k127_6579698_9 Polysaccharide biosynthesis protein K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000282 289.0
BYDH2_k127_6604493_0 Formate acetyltransferase K00656 - 2.3.1.54 0.0 1217.0
BYDH2_k127_6604493_1 SMART ATPase, AAA type, core K06148 - - 2.085e-274 848.0
BYDH2_k127_6604493_2 TIGRFAM Lipoprotein releasing system, transmembrane protein, LolC E family K09808 - - 8.126e-249 770.0
BYDH2_k127_6604493_4 Belongs to the arginase family K01480 - 3.5.3.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009052 579.0
BYDH2_k127_6604493_5 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003224 451.0
BYDH2_k127_6604493_6 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002253 322.0
BYDH2_k127_6604493_7 Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner K09810 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003584 312.0
BYDH2_k127_6604493_8 4Fe-4S single cluster domain K04069 - 1.97.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001526 275.0
BYDH2_k127_6617562_0 Neisseria PilC beta-propeller domain K02674 - - 0.0 1506.0
BYDH2_k127_6617562_1 Belongs to the ClpA ClpB family K03694 - - 0.0 1447.0
BYDH2_k127_6617562_10 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K03527 - 1.17.7.4 1.98e-199 621.0
BYDH2_k127_6617562_11 TYPE 4 fimbrial BIOGENESIS K02672 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001256 538.0
BYDH2_k127_6617562_12 Plays a role in the regulation of phosphate uptake K02039 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005803 452.0
BYDH2_k127_6617562_13 Response regulator receiver K15012 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005552 346.0
BYDH2_k127_6617562_14 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003701 301.0
BYDH2_k127_6617562_15 type IV pilus modification protein PilV K02671 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000009864 267.0
BYDH2_k127_6617562_16 Ferric uptake regulator family K03711 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001293 240.0
BYDH2_k127_6617562_17 Type II transport protein GspH K08084 - - 0.00000000000000000000000000000000000000000000000000000000000000000004113 236.0
BYDH2_k127_6617562_18 Pilus assembly protein PilX - - - 0.000000000000000000000000000000000000000000000000000000000000001711 221.0
BYDH2_k127_6617562_19 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation K06891 - - 0.0000000000000000000000000000000000000000000000000000009235 192.0
BYDH2_k127_6617562_2 Putative diguanylate phosphodiesterase - - - 9.715e-289 890.0
BYDH2_k127_6617562_20 Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate K01807 - 5.3.1.6 0.00000000000000000000000000000000000000000000000000001275 188.0
BYDH2_k127_6617562_21 Type IV minor pilin ComP, DNA uptake sequence receptor K02655 - - 0.00000000000000000000000000000000000000000000000004759 181.0
BYDH2_k127_6617562_22 PFAM Cold-shock protein, DNA-binding K03704 - - 0.0000000000000000000000000000000000001488 141.0
BYDH2_k127_6617562_23 COG2801 Transposase and inactivated derivatives K07497 - - 0.0000000000000003815 79.0
BYDH2_k127_6617562_24 PFAM NAD-dependent glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.00003292 49.0
BYDH2_k127_6617562_25 Part of the tripartite ATP-independent periplasmic (TRAP) transport system - - - 0.00003926 48.0
BYDH2_k127_6617562_3 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 1.796e-262 810.0
BYDH2_k127_6617562_4 Signal transduction histidine kinase K15011 - 2.7.13.3 3.609e-259 801.0
BYDH2_k127_6617562_5 TIGRFAM isocitrate dehydrogenase, NADP-dependent K00031 GO:0003674,GO:0003824,GO:0003862,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006551,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009098,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.42 4.209e-255 789.0
BYDH2_k127_6617562_6 DAHP synthetase I family K03856 - 2.5.1.54 3.315e-240 743.0
BYDH2_k127_6617562_7 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 4.969e-211 658.0
BYDH2_k127_6617562_8 TIGRFAM glycine oxidase ThiO K03153 - 1.4.3.19 3.613e-209 653.0
BYDH2_k127_6617562_9 Protein conserved in bacteria - - - 1.943e-205 642.0
BYDH2_k127_6618390_0 DDE superfamily endonuclease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005732 391.0
BYDH2_k127_6618390_1 Winged helix-turn helix - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003863 277.0
BYDH2_k127_6618390_2 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.000000000000000000000001728 106.0
BYDH2_k127_6618390_3 Polysaccharide biosynthesis protein - - - 0.00000000001647 65.0
BYDH2_k127_6619098_0 Histidine kinase - - - 0.0 1366.0
BYDH2_k127_6619098_1 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01916,K01950 - 6.3.1.5,6.3.5.1 6.992e-320 983.0
BYDH2_k127_6619098_10 PFAM Class II aldolase adducin K01628 - 4.1.2.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004261 514.0
BYDH2_k127_6619098_11 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009198 472.0
BYDH2_k127_6619098_12 PFAM NAD-dependent glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004123 456.0
BYDH2_k127_6619098_13 Hep Hag repeat protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005148 433.0
BYDH2_k127_6619098_14 PFAM Signal transduction response regulator, receiver - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009818 421.0
BYDH2_k127_6619098_15 PFAM Exopolysaccharide synthesis, ExoD - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004535 386.0
BYDH2_k127_6619098_16 Maf-like protein K06287 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001361 383.0
BYDH2_k127_6619098_17 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 - 2.1.1.177 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002699 265.0
BYDH2_k127_6619098_18 PFAM RNA-binding S4 K04762 - - 0.000000000000000000000000000000000000000000000000000000000000000000001749 237.0
BYDH2_k127_6619098_19 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000007419 237.0
BYDH2_k127_6619098_2 Ribonuclease E/G family K08301 - - 4.004e-298 916.0
BYDH2_k127_6619098_20 Zinc-finger domain - - - 0.000000000000000000000000000000000000001052 148.0
BYDH2_k127_6619098_21 Belongs to the aspartokinase family K00928 GO:0003674,GO:0003824,GO:0004072,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0019202,GO:0019752,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576 2.7.2.4 0.0000000000000000000000008712 103.0
BYDH2_k127_6619098_3 PFAM Peptidase M48 - - - 4.22e-291 897.0
BYDH2_k127_6619098_4 alpha beta alpha domain I K01835,K01840,K15778 GO:0000271,GO:0000287,GO:0003674,GO:0003824,GO:0004614,GO:0004615,GO:0005488,GO:0005975,GO:0005976,GO:0006082,GO:0006629,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0009058,GO:0009059,GO:0009103,GO:0009243,GO:0009244,GO:0009311,GO:0009312,GO:0009405,GO:0009987,GO:0016051,GO:0016053,GO:0016853,GO:0016866,GO:0016868,GO:0017144,GO:0019752,GO:0033692,GO:0034637,GO:0034645,GO:0042120,GO:0042121,GO:0043167,GO:0043169,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044281,GO:0044283,GO:0044419,GO:0046394,GO:0046401,GO:0046402,GO:0046872,GO:0051704,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 5.4.2.2,5.4.2.8 2.72e-282 869.0
BYDH2_k127_6619098_5 Putative beta-barrel porin-2, OmpL-like. bbp2 - - - 4.228e-259 802.0
BYDH2_k127_6619098_6 OsmC-like protein K06889,K07397 - - 2.599e-243 754.0
BYDH2_k127_6619098_7 MacB-like periplasmic core domain K02004 - - 4.958e-239 741.0
BYDH2_k127_6619098_8 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 2.854e-207 648.0
BYDH2_k127_6619098_9 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 1.204e-201 627.0
BYDH2_k127_6675150_0 Lipase (class 3) - - - 3.966e-238 739.0
BYDH2_k127_6675150_1 Radical SAM superfamily K04069 - 1.97.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003374 573.0
BYDH2_k127_6675150_2 PFAM UPF0103 Mediator of ErbB2-driven cell motility K06990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004007 492.0
BYDH2_k127_6675150_3 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009588 437.0
BYDH2_k127_6675150_4 PFAM AMMECR1 domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000001384 220.0
BYDH2_k127_6731479_0 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 7.036e-212 659.0
BYDH2_k127_6731479_1 Belongs to the BI1 family K19416 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006748 336.0
BYDH2_k127_6731479_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001523 273.0
BYDH2_k127_6731479_3 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.0000000000001534 70.0
BYDH2_k127_6788023_0 it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins K02314 - 3.6.4.12 5.251e-292 899.0
BYDH2_k127_6788023_1 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766 GO:0000162,GO:0003674,GO:0003824,GO:0004048,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.18 8.137e-201 627.0
BYDH2_k127_6788023_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009139 542.0
BYDH2_k127_6788023_3 Belongs to the TrpC family K01609 GO:0003674,GO:0003824,GO:0004425,GO:0016829,GO:0016830,GO:0016831 4.1.1.48 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005652 501.0
BYDH2_k127_6788023_4 metallophosphoesterase K07098 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000022 431.0
BYDH2_k127_6788023_5 PFAM Glutamine amidotransferase class-I K01658 - 4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005147 386.0
BYDH2_k127_6788023_6 Binds together with S18 to 16S ribosomal RNA K02990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003209 291.0
BYDH2_k127_6788023_7 Binds to the 23S rRNA K02939 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003874 271.0
BYDH2_k127_6788023_8 Binds single-stranded DNA at the primosome assembly site (PAS) K02686 - - 0.000000000000000000000000000000000000000000000000000003039 190.0
BYDH2_k127_6788023_9 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 - - 0.00000000000000000000000000000000000000000000000000001338 189.0
BYDH2_k127_6813541_0 Regulator of K conductance, C-terminal - - - 0.0 1099.0
BYDH2_k127_6813541_1 Protein of unknown function (DUF3617) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005731 301.0
BYDH2_k127_6813541_2 Belongs to the RNase T2 family K01166 - 3.1.27.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004678 279.0
BYDH2_k127_690082_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1474.0
BYDH2_k127_690082_1 Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein K03611 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002038 276.0
BYDH2_k127_6948632_0 Diguanylate cyclase phosphodiesterase with PAS PAC - - - 0.0 1816.0
BYDH2_k127_6948632_1 CoA binding domain K09181 - - 0.0 1710.0
BYDH2_k127_6948632_10 Enoyl- acyl-carrier-protein reductase NADH K00208 - 1.3.1.10,1.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003149 514.0
BYDH2_k127_6948632_11 Belongs to the class I-like SAM-binding methyltransferase superfamily. TPMT family K00569 - 2.1.1.67 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002734 414.0
BYDH2_k127_6948632_12 PFAM thioesterase superfamily K19222 - 3.1.2.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005434 323.0
BYDH2_k127_6948632_13 Bacterial SH3 domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004915 301.0
BYDH2_k127_6948632_14 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003255 269.0
BYDH2_k127_6948632_15 One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA K03071 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004933 255.0
BYDH2_k127_6948632_16 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.00000000000000000000000000000000000000000004765 161.0
BYDH2_k127_6948632_18 - - - - 0.0000000001061 62.0
BYDH2_k127_6948632_19 - - - - 0.000008247 51.0
BYDH2_k127_6948632_2 extracellular solute-binding protein, family 5 - - - 0.0 1421.0
BYDH2_k127_6948632_3 Peptidyl-prolyl cis-trans isomerase K03770 - 5.2.1.8 0.0 1140.0
BYDH2_k127_6948632_4 L-serine dehydratase single chain form K01752 - 4.3.1.17 9.198e-292 897.0
BYDH2_k127_6948632_5 Protein of unknown function (DUF3422) - - - 1.363e-274 847.0
BYDH2_k127_6948632_6 PFAM binding-protein-dependent transport systems inner membrane component K02033 - - 3.441e-197 616.0
BYDH2_k127_6948632_7 Glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001911 606.0
BYDH2_k127_6948632_8 PFAM histone deacetylase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000318 595.0
BYDH2_k127_6948632_9 Biotin lipoyl attachment K01941 - 6.3.4.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007442 546.0
BYDH2_k127_7106521_0 TIGRFAM acetyl-CoA carboxylase, biotin carboxylase K01961 GO:0003674,GO:0003824,GO:0004075,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010565,GO:0016053,GO:0016874,GO:0016879,GO:0019216,GO:0019217,GO:0019222,GO:0019752,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032787,GO:0042304,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045717,GO:0045833,GO:0045922,GO:0046394,GO:0046890,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051055,GO:0062012,GO:0062014,GO:0065007,GO:0071704,GO:0072330,GO:0080090,GO:1901576 6.3.4.14,6.4.1.2 8.308e-292 897.0
BYDH2_k127_7106521_1 Methionine synthase K00548 - 2.1.1.13 3.554e-250 773.0
BYDH2_k127_7106521_2 Ribosomal protein L11 methyltransferase K02687 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002482 563.0
BYDH2_k127_7106521_3 zinc-ribbon domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002841 428.0
BYDH2_k127_7106521_4 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006181 287.0
BYDH2_k127_7106521_5 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000335 277.0
BYDH2_k127_7106521_6 - - - - 0.000000000000000004328 91.0
BYDH2_k127_710853_0 PFAM Major facilitator superfamily K08218 - - 1.563e-278 859.0
BYDH2_k127_710853_1 Transglycosylase SLT domain K08305 - - 4.375e-255 789.0
BYDH2_k127_710853_2 AFG1-like ATPase K06916 - - 2.7e-243 753.0
BYDH2_k127_710853_3 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 2.541e-208 649.0
BYDH2_k127_710853_4 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000283 310.0
BYDH2_k127_710853_5 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K06186 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003232 252.0
BYDH2_k127_710853_6 Belongs to the Fur family K03711 - - 0.0000000000000000000000000000000000000000000000000000002963 196.0
BYDH2_k127_710853_7 Exodeoxyribonuclease III xth K01142 - 3.1.11.2 0.00000000000000000000000000000000000000000000003435 169.0
BYDH2_k127_710853_8 Transposase K07481 - - 0.00000000000000017 80.0
BYDH2_k127_710853_9 PFAM Transposase, IS4-like K07481 - - 0.00000000003746 66.0
BYDH2_k127_7145844_0 Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P) K03414 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001479 443.0
BYDH2_k127_7145844_1 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002724 376.0
BYDH2_k127_7145844_2 Exodeoxyribonuclease III xth K01142 - 3.1.11.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002441 353.0
BYDH2_k127_7145844_3 Response regulator receiver K03413 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000045 252.0
BYDH2_k127_7161609_0 Tex-like protein N-terminal domain K06959 - - 0.0 1399.0
BYDH2_k127_7161609_1 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 2.317e-261 807.0
BYDH2_k127_7161609_2 May be involved in recombination K03554 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005402 576.0
BYDH2_k127_7161609_3 6-phosphogluconate dehydrogenase K00033 - 1.1.1.343,1.1.1.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001172 521.0
BYDH2_k127_7161609_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009255 404.0
BYDH2_k127_7161609_5 Putative prokaryotic signal transducing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000261 224.0
BYDH2_k127_7161609_7 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616,K13810 - 2.2.1.2,5.3.1.9 0.000000000005295 67.0
BYDH2_k127_7180457_0 Belongs to the AlaDH PNT family K00259 - 1.4.1.1 3.041e-227 706.0
BYDH2_k127_7180457_1 Calcineurin-like phosphoesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000416 594.0
BYDH2_k127_7180457_2 Domain of unknown function (DUF1732) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001479 520.0
BYDH2_k127_7180457_3 PFAM Metal-dependent hydrolase HDOD - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009221 480.0
BYDH2_k127_7180457_4 KR domain K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008723 429.0
BYDH2_k127_7180457_5 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP K02837 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005743 367.0
BYDH2_k127_7180457_6 Ankyrin repeat K06867 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001518 342.0
BYDH2_k127_7180457_7 Restriction endonuclease K07448 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007436 314.0
BYDH2_k127_7180457_9 TatD related DNase K03424 - - 0.00003522 46.0
BYDH2_k127_7191769_0 Protein of unknown function (DUF3570) - - - 0.0 1438.0
BYDH2_k127_7191769_1 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004623 567.0
BYDH2_k127_7191769_2 Redoxin domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002741 299.0
BYDH2_k127_7191769_3 Domain of unknown function (DUF4266) - - - 0.00000000000000000000000000005081 117.0
BYDH2_k127_7238298_0 Ketoacyl-synthetase C-terminal extension - - - 0.0 4426.0
BYDH2_k127_7238298_1 Ketoacyl-synthetase C-terminal extension K15676 - - 0.0 3033.0
BYDH2_k127_7238298_10 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001883 531.0
BYDH2_k127_7238298_11 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000186 415.0
BYDH2_k127_7238298_12 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001866 392.0
BYDH2_k127_7238298_13 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.0000000000000000000000000000000000000000000000000000005788 194.0
BYDH2_k127_7238298_14 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.00000000000000000000000000000000000000000000000000005107 187.0
BYDH2_k127_7238298_2 Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00163 - 1.2.4.1 0.0 1801.0
BYDH2_k127_7238298_3 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.0 1108.0
BYDH2_k127_7238298_4 ADP-glyceromanno-heptose 6-epimerase activity - - - 0.0 1037.0
BYDH2_k127_7238298_5 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 GO:0000096,GO:0000097,GO:0000166,GO:0001666,GO:0002376,GO:0002437,GO:0002439,GO:0002544,GO:0003674,GO:0003824,GO:0004013,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006152,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0006950,GO:0006952,GO:0006954,GO:0006955,GO:0007584,GO:0007610,GO:0007622,GO:0007623,GO:0008150,GO:0008152,GO:0008652,GO:0009056,GO:0009058,GO:0009063,GO:0009066,GO:0009069,GO:0009116,GO:0009119,GO:0009164,GO:0009605,GO:0009628,GO:0009987,GO:0009991,GO:0016053,GO:0016054,GO:0016787,GO:0016801,GO:0016802,GO:0017076,GO:0017144,GO:0019439,GO:0019510,GO:0019752,GO:0030554,GO:0031667,GO:0033353,GO:0034641,GO:0034655,GO:0034656,GO:0036094,GO:0036293,GO:0042219,GO:0042221,GO:0042278,GO:0042454,GO:0042745,GO:0042802,GO:0042995,GO:0043005,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044272,GO:0044273,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046128,GO:0046130,GO:0046394,GO:0046395,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0046700,GO:0048037,GO:0048511,GO:0048512,GO:0050662,GO:0050667,GO:0050896,GO:0051186,GO:0051187,GO:0051287,GO:0055086,GO:0070482,GO:0071268,GO:0071704,GO:0072521,GO:0072523,GO:0097159,GO:0097458,GO:0098604,GO:0120025,GO:1901135,GO:1901136,GO:1901265,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606,GO:1901607,GO:1901657,GO:1901658 3.3.1.1 1.283e-307 944.0
BYDH2_k127_7238298_6 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 - 2.5.1.6 1.13e-243 754.0
BYDH2_k127_7238298_7 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00382,K00627 - 1.8.1.4,2.3.1.12 1.42e-243 756.0
BYDH2_k127_7238298_8 Alpha/beta hydrolase family - - - 4.676e-232 719.0
BYDH2_k127_7238298_9 Methylenetetrahydrofolate reductase K00297 GO:0000166,GO:0003674,GO:0003824,GO:0004489,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006575,GO:0006725,GO:0006730,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009396,GO:0009987,GO:0016043,GO:0016053,GO:0016491,GO:0016645,GO:0016646,GO:0018130,GO:0019438,GO:0019752,GO:0022607,GO:0034641,GO:0036094,GO:0042398,GO:0042558,GO:0042559,GO:0043167,GO:0043168,GO:0043436,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046653,GO:0046654,GO:0048037,GO:0050660,GO:0050662,GO:0051186,GO:0051188,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:0071949,GO:0097159,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 1.5.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006978 552.0
BYDH2_k127_7248810_0 NnrS protein K07234 - - 6.468e-257 793.0
BYDH2_k127_7248810_1 PFAM PHP C-terminal K07053 GO:0003674,GO:0003824,GO:0005488,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0030145,GO:0042578,GO:0043167,GO:0043169,GO:0044237,GO:0046872,GO:0046914,GO:0097657 3.1.3.97 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004933 579.0
BYDH2_k127_7248810_10 YoeB-like toxin of bacterial type II toxin-antitoxin system - - - 0.000000000000000000000000000000000000003644 147.0
BYDH2_k127_7248810_11 Antitoxin component of a toxin-antitoxin (TA) module - - - 0.00000000000000000000000000000000000004254 143.0
BYDH2_k127_7248810_12 Antitoxin component of a toxin-antitoxin (TA) module - - - 0.00000000000000000000000000000000002972 136.0
BYDH2_k127_7248810_13 HNH nucleases - - - 0.000000000000000000000000004075 116.0
BYDH2_k127_7248810_14 - - - - 0.0000000000000000000000002681 105.0
BYDH2_k127_7248810_15 endonuclease activity - - - 0.0000000000000000000000922 98.0
BYDH2_k127_7248810_17 TIR domain - - - 0.00001094 48.0
BYDH2_k127_7248810_2 Belongs to the MtfA family K09933 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001738 518.0
BYDH2_k127_7248810_3 PFAM Aminoacyl-tRNA synthetase, class Ib K01867 - 6.1.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001372 440.0
BYDH2_k127_7248810_4 Peptidase M50 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005367 425.0
BYDH2_k127_7248810_5 HAD-hyrolase-like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005665 423.0
BYDH2_k127_7248810_6 alpha-ribazole phosphatase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003174 319.0
BYDH2_k127_7248810_7 TIGRFAM Sua5 YciO YrdC YwlC family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001119 305.0
BYDH2_k127_7248810_8 TIGRFAM Nucleotidyltransferase substrate binding protein, HI0074 - - - 0.000000000000000000000000000000000000000000000007113 174.0
BYDH2_k127_7248810_9 PFAM Nucleotidyltransferase - - - 0.000000000000000000000000000000000000003554 149.0
BYDH2_k127_7251846_0 LppC putative lipoprotein K07121 - - 8.846e-216 676.0
BYDH2_k127_7251846_1 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003471 499.0
BYDH2_k127_7251846_2 Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate K01465 - 3.5.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001151 445.0
BYDH2_k127_7251846_3 Short-chain dehydrogenase reductase SDR K00059,K03793 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008667,GO:0009058,GO:0009237,GO:0009238,GO:0009239,GO:0009712,GO:0009713,GO:0009987,GO:0016043,GO:0016491,GO:0016627,GO:0016628,GO:0018130,GO:0018958,GO:0019184,GO:0019290,GO:0019438,GO:0019540,GO:0019748,GO:0022607,GO:0034641,GO:0042802,GO:0043043,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044550,GO:0046189,GO:0046483,GO:0051186,GO:0051188,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 1.1.1.100,1.5.1.33 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005149 359.0
BYDH2_k127_7251846_4 Belongs to the UPF0102 family K07460 - - 0.00000000000000000000001325 103.0
BYDH2_k127_732889_0 Response regulator receiver K02487,K03407,K06596 - 2.7.13.3 0.0 1457.0
BYDH2_k127_732889_1 PFAM ketose-bisphosphate aldolase, class-II K01624 - 4.1.2.13 1.985e-247 766.0
BYDH2_k127_732889_2 AAA domain (dynein-related subfamily) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001188 593.0
BYDH2_k127_732889_3 CHAP domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003641 467.0
BYDH2_k127_732889_4 Ribulose bisphosphate carboxylase, small chain K01602 - 4.1.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008994 313.0
BYDH2_k127_732889_5 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003133 241.0
BYDH2_k127_734100_0 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 0.0 1349.0
BYDH2_k127_734100_1 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 2.088e-301 926.0
BYDH2_k127_734100_10 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002822 471.0
BYDH2_k127_734100_11 Redoxin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005836 388.0
BYDH2_k127_734100_12 Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes - - - 0.000000000000000000000000000000000000000000000000000003599 190.0
BYDH2_k127_734100_13 excinuclease ABC activity K02342 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000001243 190.0
BYDH2_k127_734100_14 Domain of unknown function (DUF4357) - - - 0.00000000000000000000000000003328 117.0
BYDH2_k127_734100_15 Domain of unknown function (DUF4357) - - - 0.00000000000001457 74.0
BYDH2_k127_734100_16 Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA K03498 - - 0.000000000001975 67.0
BYDH2_k127_734100_2 TrkA-N domain protein K03499 - - 4.922e-285 878.0
BYDH2_k127_734100_3 Belongs to the acetyltransferase family. ArgA subfamily K14682 - 2.3.1.1 7.667e-278 856.0
BYDH2_k127_734100_4 Sigma-54 interaction domain - - - 6.48e-261 805.0
BYDH2_k127_734100_5 Belongs to the phosphoglycerate kinase family K00927 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.7.2.3 1.293e-246 763.0
BYDH2_k127_734100_6 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype K01624 - 4.1.2.13 2.069e-229 710.0
BYDH2_k127_734100_7 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 GO:0000166,GO:0003674,GO:0003824,GO:0004365,GO:0005488,GO:0008150,GO:0008152,GO:0016491,GO:0016620,GO:0016903,GO:0036094,GO:0043891,GO:0048037,GO:0050662,GO:0051287,GO:0055114,GO:0097159,GO:1901265,GO:1901363 1.2.1.12 1.543e-215 670.0
BYDH2_k127_734100_8 Inositol monophosphatase K01082,K01092 - 3.1.3.25,3.1.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009173 535.0
BYDH2_k127_734100_9 Signal transduction histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002934 488.0
BYDH2_k127_7359642_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 0.0 1146.0
BYDH2_k127_7359642_1 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 0.0 1047.0
BYDH2_k127_7359642_10 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0032296,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363 3.1.26.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000255 447.0
BYDH2_k127_7359642_11 RNA polymerase sigma factor K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001787 391.0
BYDH2_k127_7359642_12 Anti sigma-E protein RseA, N-terminal domain K03597 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001659 335.0
BYDH2_k127_7359642_13 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003859 320.0
BYDH2_k127_7359642_14 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006824 302.0
BYDH2_k127_7359642_15 CreA protein K05805 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002224 302.0
BYDH2_k127_7359642_16 MEKHLA domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002695 272.0
BYDH2_k127_7359642_17 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.0000000000000000000000000000000000000000000000000000000000000000000007914 237.0
BYDH2_k127_7359642_18 Domain of unknown function (DUF4845) - - - 0.0000000000000000000000000000000000000000000000000000000002326 204.0
BYDH2_k127_7359642_19 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.000000000000000000000000000000004495 128.0
BYDH2_k127_7359642_2 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00382 GO:0003674,GO:0003824,GO:0004148,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005759,GO:0006082,GO:0006084,GO:0006085,GO:0006086,GO:0006090,GO:0006139,GO:0006163,GO:0006164,GO:0006464,GO:0006637,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0018130,GO:0018335,GO:0019362,GO:0019438,GO:0019538,GO:0019637,GO:0019693,GO:0019752,GO:0031974,GO:0031981,GO:0032787,GO:0032991,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0035383,GO:0035384,GO:0036211,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043436,GO:0043543,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044272,GO:0044281,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045239,GO:0045240,GO:0045252,GO:0045254,GO:0046390,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0061732,GO:0070013,GO:0071616,GO:0071704,GO:0072521,GO:0072522,GO:0072524,GO:0090407,GO:0106077,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902494,GO:1990204,GO:1990234 1.8.1.4 4.314e-290 893.0
BYDH2_k127_7359642_20 Glutaredoxin-like domain (DUF836) K00384 - 1.8.1.9 0.000000000000000000000005385 104.0
BYDH2_k127_7359642_22 Winged helix-turn helix - - - 0.0002356 43.0
BYDH2_k127_7359642_3 Belongs to the peptidase S1C family K04771 - 3.4.21.107 8.706e-288 887.0
BYDH2_k127_7359642_4 Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide-linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N-acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides K00997,K01207 - 2.7.8.7,3.2.1.52 1.673e-222 691.0
BYDH2_k127_7359642_5 MucB/RseB C-terminal domain K03598 - - 7.674e-196 612.0
BYDH2_k127_7359642_6 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001016 555.0
BYDH2_k127_7359642_7 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003748 552.0
BYDH2_k127_7359642_8 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006509 529.0
BYDH2_k127_7359642_9 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 - 2.6.99.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002193 447.0
BYDH2_k127_7455133_0 PFAM cell divisionFtsK SpoIIIE K03466 - - 0.0 1448.0
BYDH2_k127_7455133_1 AAA C-terminal domain K07478 - - 1.614e-269 835.0
BYDH2_k127_7455133_2 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) K03634 - - 0.00000000000000000000000004405 116.0
BYDH2_k127_7455133_3 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.000000000000000000001083 96.0
BYDH2_k127_7455133_4 diguanylate cyclase - - - 0.000000000000000006168 83.0
BYDH2_k127_7460826_0 modulator of DNA gyrase K03592 - - 1.767e-283 873.0
BYDH2_k127_7460826_1 Putative neutral zinc metallopeptidase K06973 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101 442.0
BYDH2_k127_7460826_2 Belongs to the UPF0307 family K09889 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001345 308.0
BYDH2_k127_7460826_3 general secretion pathway protein G K02456 - - 0.0000000000000000000000000000000000000215 144.0
BYDH2_k127_7460826_4 Belongs to the sulfur carrier protein TusA family K04085 - - 0.0000000000000000000000000000000000001581 142.0
BYDH2_k127_7460826_5 Histidine kinase - - - 0.0000000000000000001223 90.0
BYDH2_k127_7463013_0 cyanophycin synthetase K03802 - 6.3.2.29,6.3.2.30 0.0 1645.0
BYDH2_k127_7463013_1 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle K01595 - 4.1.1.31 0.0 1460.0
BYDH2_k127_7463013_10 PFAM NAD-dependent epimerase dehydratase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008738 547.0
BYDH2_k127_7463013_11 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005403 521.0
BYDH2_k127_7463013_12 Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity K18778 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007565 502.0
BYDH2_k127_7463013_13 uroporphyrinogen III synthase K01719 - 4.2.1.75 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006664 482.0
BYDH2_k127_7463013_14 Lumazine binding domain K00793 - 2.5.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001624 354.0
BYDH2_k127_7463013_15 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 - 2.7.1.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001256 345.0
BYDH2_k127_7463013_16 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002327 319.0
BYDH2_k127_7463013_17 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 - 2.5.1.78 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000812 308.0
BYDH2_k127_7463013_18 Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG) K01095 - 3.1.3.27 0.000000000000001908 78.0
BYDH2_k127_7463013_19 HemY protein N-terminus K02498 - - 0.000000009758 59.0
BYDH2_k127_7463013_2 cyanophycin synthetase K03802 - 6.3.2.29,6.3.2.30 0.0 1429.0
BYDH2_k127_7463013_20 PFAM IstB domain protein ATP-binding protein - - - 0.0002543 44.0
BYDH2_k127_7463013_3 Domain of unknown function DUF21 - - - 4.696e-258 797.0
BYDH2_k127_7463013_4 Type II secretion system K02653 - - 1.03e-245 761.0
BYDH2_k127_7463013_5 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 1.072e-222 692.0
BYDH2_k127_7463013_6 Oxidoreductase FAD-binding domain K00523 - 1.17.1.1 1.113e-216 674.0
BYDH2_k127_7463013_7 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 - 2.5.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101 597.0
BYDH2_k127_7463013_8 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008322 591.0
BYDH2_k127_7463013_9 HemY protein N-terminus K02498 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001991 579.0
BYDH2_k127_748137_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003752 381.0
BYDH2_k127_748137_1 von Willebrand factor, type A - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000213 321.0
BYDH2_k127_748137_2 Nucleotidyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004204 244.0
BYDH2_k127_748137_3 Protein of unknown function DUF86 - - - 0.0000000000000000000000000000000000000000000000000000000004121 205.0
BYDH2_k127_748137_4 Putative motility protein - - - 0.00000000000000000000000000001365 120.0
BYDH2_k127_7609303_0 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00819 - 2.6.1.13 4.752e-277 852.0
BYDH2_k127_7609303_1 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 4.851e-242 748.0
BYDH2_k127_7609303_2 AI-2E family transporter - - - 9.467e-214 665.0
BYDH2_k127_7609303_3 TIGRFAM HAD-superfamily hydrolase, subfamily IB (PSPase-like) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000231 455.0
BYDH2_k127_7609303_4 Belongs to the DnaA family K10763 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000117 438.0
BYDH2_k127_7667183_0 Major Facilitator Superfamily - - - 1.377e-242 752.0
BYDH2_k127_7667183_1 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 5.865e-199 620.0
BYDH2_k127_7667183_2 Dioxygenase K00449 - 1.13.11.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004037 356.0
BYDH2_k127_7667183_3 Redoxin K03564 - 1.11.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001003 344.0
BYDH2_k127_7667183_4 PFAM Smr protein MutS2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005701 324.0
BYDH2_k127_7667183_5 response to heat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009859 312.0
BYDH2_k127_7667183_6 Prokaryotic dksA/traR C4-type zinc finger - - - 0.000000000000000000000000000000000000000000000000000000000000000000003659 235.0
BYDH2_k127_7667183_7 - - - - 0.0000000000000000000000000000000000000000000000000000000001897 202.0
BYDH2_k127_7667183_9 PEP-CTERM motif - - - 0.0000000000000001197 87.0
BYDH2_k127_7718895_0 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region K18005 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 1.12.1.2 2.386e-318 982.0
BYDH2_k127_7718895_1 Spermine/spermidine synthase domain K00797 - 2.5.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009892 479.0
BYDH2_k127_7718895_2 4Fe-4S single cluster domain K18006 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 1.12.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001306 456.0
BYDH2_k127_7718895_3 Protein of unknown function (DUF1614) - - - 0.00000000000000000000000000000000000000000000000000000000000004886 214.0
BYDH2_k127_7718895_4 PFAM NADH ubiquinone K18007 - 1.12.1.2 0.000000000004622 69.0
BYDH2_k127_7718895_6 Transposase IS200 like - - - 0.00005972 45.0
BYDH2_k127_7788372_0 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 - 6.3.4.4 6.527e-281 864.0
BYDH2_k127_7788372_1 Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine K02502 - - 4.961e-223 695.0
BYDH2_k127_7788372_2 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000001018 223.0
BYDH2_k127_7788372_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000002558 218.0
BYDH2_k127_7788372_4 - - - - 0.000000000000000000000000000000000000000007688 156.0
BYDH2_k127_7788372_5 Binds directly to 16S ribosomal RNA K02968 - - 0.00000000000000000000000000000000000000001451 153.0
BYDH2_k127_7788372_6 Uncharacterized protein conserved in bacteria (DUF2065) K09937 - - 0.00000000000000000000000000006273 116.0
BYDH2_k127_7788372_7 PFAM transposase, IS4 family protein K07481 - - 0.0006215 44.0
BYDH2_k127_7789969_0 Methionine synthase K00548 - 2.1.1.13 0.0 1650.0
BYDH2_k127_7789969_1 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.0000000000000001664 80.0
BYDH2_k127_7789969_2 - - - - 0.000000000004053 68.0
BYDH2_k127_7789969_4 - - - - 0.0005464 46.0
BYDH2_k127_7899035_0 Mechanosensitive ion channel K05802,K22051 - - 0.0 1582.0
BYDH2_k127_7899035_1 PFAM Transposase, IS4-like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008516 588.0
BYDH2_k127_7899035_10 AAA domain (dynein-related subfamily) K07452 - - 0.00000000000000000000004769 100.0
BYDH2_k127_7899035_12 PFAM Integrase, catalytic core K07497 - - 0.0000000000000000002912 89.0
BYDH2_k127_7899035_13 Putative transposase - - - 0.00000000000000007075 81.0
BYDH2_k127_7899035_2 McrBC 5-methylcytosine restriction system component K19147 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009462 421.0
BYDH2_k127_7899035_3 DsrE/DsrF-like family - - - 0.000000000000000000000000000000000000000000000000000000000000000004433 226.0
BYDH2_k127_7899035_4 AAA domain (dynein-related subfamily) K07452 - - 0.000000000000000000000000000000000000000000000000000000000002153 220.0
BYDH2_k127_7899035_5 - - - - 0.00000000000000000000000000000000000000000000000002128 183.0
BYDH2_k127_7899035_6 - - - - 0.000000000000000000000000000000000000000002488 159.0
BYDH2_k127_7899035_7 AAA domain (dynein-related subfamily) K07452 GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0003924,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005488,GO:0006139,GO:0006259,GO:0006308,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0015666,GO:0016462,GO:0016787,GO:0016788,GO:0016817,GO:0016818,GO:0017111,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0090305,GO:0097159,GO:0140097,GO:1901360,GO:1901361,GO:1901363,GO:1901575 - 0.000000000000000000000000000000000000001152 151.0
BYDH2_k127_7899035_8 restriction endodeoxyribonuclease activity K07452 - - 0.0000000000000000000000000006956 118.0
BYDH2_k127_7899035_9 PFAM Peptidase S24 S26A S26B, conserved region K03503 - - 0.0000000000000000000000002247 111.0
BYDH2_k127_7904360_0 DNA mismatch repair protein MutS - - - 0.0 1022.0
BYDH2_k127_7904360_1 SMART Diguanylate phosphodiesterase - - - 1.335e-271 846.0
BYDH2_k127_7904360_2 ABC-type branched-chain amino acid transport systems, periplasmic component K01999 - - 1.057e-270 836.0
BYDH2_k127_7904360_3 MacB-like periplasmic core domain K02004 - - 3.421e-233 724.0
BYDH2_k127_7904360_4 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 2.547e-219 684.0
BYDH2_k127_7904360_5 PFAM Endonuclease exonuclease phosphatase K06896 - 3.1.3.90 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005719 577.0
BYDH2_k127_7904360_6 pfam abc K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003238 354.0
BYDH2_k127_7904360_7 - - - - 0.0000000000000000000000001738 106.0
BYDH2_k127_8010912_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 0.0 1564.0
BYDH2_k127_8010912_1 ribonuclease II K01147 - 3.1.13.1 0.0 1165.0
BYDH2_k127_8010912_2 Acts as a magnesium transporter K06213 - - 1.951e-287 885.0
BYDH2_k127_8010912_3 Peptidase family M23 K08259 - 3.4.24.75 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002566 580.0
BYDH2_k127_8010912_4 Sodium/calcium exchanger protein K07301 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008166 578.0
BYDH2_k127_8010912_5 Gram-negative bacterial TonB protein C-terminal K03832 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001265 547.0
BYDH2_k127_8010912_6 TIGRFAM ATPase, P-type, K Mg Cd Cu Zn Na Ca Na H-transporter K01537 - 3.6.3.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009618 544.0
BYDH2_k127_8010912_7 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 GO:0000003,GO:0003006,GO:0003674,GO:0003824,GO:0004764,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0007275,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009790,GO:0009791,GO:0009793,GO:0009987,GO:0010154,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019632,GO:0019752,GO:0022414,GO:0032501,GO:0032502,GO:0032787,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046394,GO:0046417,GO:0048316,GO:0048608,GO:0048731,GO:0048856,GO:0055114,GO:0061458,GO:0071704,GO:1901576,GO:1901615 1.1.1.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006887 474.0
BYDH2_k127_8010912_8 Protein of unknown function (DUF721) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001356 285.0
BYDH2_k127_8010912_9 PFAM transposase, IS4 family protein - - - 0.00000000000000000000000000000000000000000000000000000000000007102 215.0
BYDH2_k127_8111777_0 Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744 - - 0.0 1370.0
BYDH2_k127_8111777_1 pyruvate-flavodoxin oxidoreductase activity - - - 0.0 1162.0
BYDH2_k127_8111777_10 Uncharacterized protein family (UPF0051) K09015 - - 4.441e-250 775.0
BYDH2_k127_8111777_11 Uncharacterized protein conserved in bacteria (DUF2331) - - - 1.209e-224 698.0
BYDH2_k127_8111777_12 Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) K00097 - 1.1.1.262 3.161e-203 634.0
BYDH2_k127_8111777_13 TIGRFAM Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001583 567.0
BYDH2_k127_8111777_14 ABC transporter K09013 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002246 503.0
BYDH2_k127_8111777_15 TIGRFAM Phosphoserine phosphatase SerB K01079 - 3.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004279 481.0
BYDH2_k127_8111777_16 Domain of unknown function (DUF4126) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000201 437.0
BYDH2_k127_8111777_17 PFAM SH3, type 3 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003065 406.0
BYDH2_k127_8111777_18 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001207 370.0
BYDH2_k127_8111777_19 Scaffold protein Nfu/NifU N terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005336 364.0
BYDH2_k127_8111777_2 malic enzyme K00029 - 1.1.1.40 0.0 1024.0
BYDH2_k127_8111777_20 Transcriptional regulator K13643 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009928 310.0
BYDH2_k127_8111777_21 NifU-like N terminal domain K04488 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001113 308.0
BYDH2_k127_8111777_22 COG2346, Truncated hemoglobins K06886 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001014 269.0
BYDH2_k127_8111777_23 Universal stress protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003215 266.0
BYDH2_k127_8111777_24 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.0000000000000000000000000000000000000000000000000000000000000000000000000001581 264.0
BYDH2_k127_8111777_25 Belongs to the HesB IscA family K13628 - - 0.000000000000000000000000000000000000000000000000000000000000004412 217.0
BYDH2_k127_8111777_26 PFAM Uncharacterised protein family UPF0150 - - - 0.00000000000000000000000000000000004707 135.0
BYDH2_k127_8111777_27 - - - - 0.0000000000000000000000000000305 121.0
BYDH2_k127_8111777_28 HicA toxin of bacterial toxin-antitoxin, - - - 0.00000000000000008308 82.0
BYDH2_k127_8111777_3 Uncharacterized protein family (UPF0051) K09014 - - 1.309e-311 955.0
BYDH2_k127_8111777_4 Cache domain - - - 1.365e-298 922.0
BYDH2_k127_8111777_5 Aldehyde dehydrogenase K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 7.135e-284 874.0
BYDH2_k127_8111777_6 - - - - 7.338e-273 841.0
BYDH2_k127_8111777_7 PFAM DNA-repair protein, UmuC-like K03502 - - 5.128e-272 839.0
BYDH2_k127_8111777_8 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 1.584e-259 801.0
BYDH2_k127_8111777_9 Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation K03771 - 5.2.1.8 2.031e-251 781.0
BYDH2_k127_8117486_0 AMP-dependent synthetase K01897 - 6.2.1.3 0.0 1086.0
BYDH2_k127_8117486_1 HNH nucleases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001208 243.0
BYDH2_k127_8117486_2 Helix-hairpin-helix domain - - - 0.000000000000000000000000000000000003309 141.0
BYDH2_k127_8131673_0 A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response - - - 3.017e-207 646.0
BYDH2_k127_8131673_1 nitroreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007599 404.0
BYDH2_k127_8131673_2 Belongs to the aspartokinase family K00928 GO:0003674,GO:0003824,GO:0004072,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0019202,GO:0019752,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576 2.7.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005313 383.0
BYDH2_k127_8131673_3 protein conserved in bacteria K09941 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001925 327.0
BYDH2_k127_8131673_4 Phosphatidylethanolamine-binding protein K06910 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001474 316.0
BYDH2_k127_8131673_5 RF-1 domain K15034 - - 0.00000000000000000000000000000000000000000000000000000000000000000004426 233.0
BYDH2_k127_8219979_0 Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC - - - 1.181e-273 842.0
BYDH2_k127_8219979_1 Dihydroorotase, multifunctional complex type K01465 - 3.5.2.3 6.908e-272 838.0
BYDH2_k127_8219979_10 HpcH/HpaI aldolase/citrate lyase family K01630 - 4.1.2.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003715 498.0
BYDH2_k127_8219979_11 Cytidylyltransferase K00979 - 2.7.7.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005619 484.0
BYDH2_k127_8219979_12 Glycosyltransferase Family 4 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003096 437.0
BYDH2_k127_8219979_13 Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol K06134 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000026 408.0
BYDH2_k127_8219979_14 Haloacid dehalogenase-like hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004525 398.0
BYDH2_k127_8219979_15 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase K01057 - 3.1.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001425 392.0
BYDH2_k127_8219979_16 Belongs to the UPF0301 (AlgH) family K07735 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001 359.0
BYDH2_k127_8219979_17 invasion associated locus B - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001617 336.0
BYDH2_k127_8219979_18 M3B, thimet oligopeptidase F K01414 - 3.4.24.70 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003444 327.0
BYDH2_k127_8219979_19 Phosphoribosyl transferase domain K02825 - 2.4.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001677 327.0
BYDH2_k127_8219979_2 Cysteine-rich domain K11473 - - 8.193e-264 815.0
BYDH2_k127_8219979_20 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002035 320.0
BYDH2_k127_8219979_21 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002967 245.0
BYDH2_k127_8219979_22 Belongs to the ArsC family K00537 - 1.20.4.1 0.000000000000000000000000000000000000000000000000000000000000004444 218.0
BYDH2_k127_8219979_23 Domain of unknown function (DUF2024) - - - 0.000000000000000000000000000000000000000000000002501 173.0
BYDH2_k127_8219979_24 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 - - 0.00000000000000000000000000000000000000000000005349 173.0
BYDH2_k127_8219979_25 Belongs to the bacterial ribosomal protein bS16 family K02959 - - 0.0000000000000000000000000000000000000000000001447 170.0
BYDH2_k127_8219979_27 hmm pf01609 - - - 0.000000001584 62.0
BYDH2_k127_8219979_3 Belongs to the ATCase OTCase family K00609 - 2.1.3.2 3.321e-200 624.0
BYDH2_k127_8219979_4 PFAM NAD-dependent epimerase dehydratase K01784 - 5.1.3.2 7.32e-199 620.0
BYDH2_k127_8219979_5 PFAM Glycosyl transferase, family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003274 606.0
BYDH2_k127_8219979_6 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K00058 - 1.1.1.399,1.1.1.95 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004325 569.0
BYDH2_k127_8219979_7 O-Antigen ligase K02847 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002543 541.0
BYDH2_k127_8219979_8 Belongs to the RNA methyltransferase TrmD family K00554 - 2.1.1.228 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000508 516.0
BYDH2_k127_8219979_9 Methyltransferase FkbM domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003437 509.0
BYDH2_k127_8248508_0 Belongs to the peptidase S16 family - - - 0.0 1165.0
BYDH2_k127_8248508_1 Heat shock 70 kDa protein K04043 - - 0.0 1031.0
BYDH2_k127_8287340_0 CHAD - - - 2.321e-260 809.0
BYDH2_k127_8287340_1 E3 Ubiquitin ligase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005296 574.0
BYDH2_k127_8287340_10 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.00000000000000000000000000000006682 133.0
BYDH2_k127_8287340_11 Domain of unknown function (DUF4372) - - - 0.000000000000000008566 88.0
BYDH2_k127_8287340_12 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.0000000002574 64.0
BYDH2_k127_8287340_13 - - - - 0.0009642 46.0
BYDH2_k127_8287340_2 TIGRFAM Polyphosphate nucleotide phosphotransferase, PPK2 K00937 - 2.7.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005404 471.0
BYDH2_k127_8287340_3 PFAM Transposase, IS4-like - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002761 444.0
BYDH2_k127_8287340_4 SMART HTH transcriptional regulator, Crp K10914 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002747 406.0
BYDH2_k127_8287340_5 LemA family K03744 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002198 366.0
BYDH2_k127_8287340_7 Domain of unknown function (DUF4156) - - - 0.000000000000000000000000000000000000000000000000000000000000007101 218.0
BYDH2_k127_8287340_8 - - - - 0.00000000000000000000000000000000000000000000000000000000000001594 216.0
BYDH2_k127_831733_0 EAL domain - - - 0.0 1155.0
BYDH2_k127_831733_1 PFAM Phospholipid glycerol acyltransferase - - - 0.0 1143.0
BYDH2_k127_831733_10 - - - - 0.000000000000000000000000000001307 123.0
BYDH2_k127_831733_2 Glycosyl transferase family 1 - - - 3.102e-228 707.0
BYDH2_k127_831733_3 Peptidase M14, carboxypeptidase A - - - 3.684e-217 674.0
BYDH2_k127_831733_4 PFAM Diacylglycerol kinase, catalytic - - - 9.521e-205 638.0
BYDH2_k127_831733_5 Patatin-like phospholipase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002689 580.0
BYDH2_k127_831733_6 Calcineurin-like phosphoesterase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009402 562.0
BYDH2_k127_831733_7 PFAM Alpha beta hydrolase fold-1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001743 449.0
BYDH2_k127_831733_8 SMART ATPase, AAA type, core K01551 - 3.6.3.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004024 333.0
BYDH2_k127_831733_9 HicB_like antitoxin of bacterial toxin-antitoxin system - - - 0.0000000000000000000000000000000000000234 143.0
BYDH2_k127_8345038_0 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 - 6.1.1.20 0.0 1420.0
BYDH2_k127_8345038_1 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 0.0 1253.0
BYDH2_k127_8345038_10 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 - - 0.000000000000000000000000000000000000000000000000000000000000000003148 226.0
BYDH2_k127_8345038_11 Small metal-binding protein - - - 0.000000000000000000000000000000000000000000000000001484 185.0
BYDH2_k127_8345038_12 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K04764 - - 0.0000000000000000000000000000000000000000000002482 168.0
BYDH2_k127_8345038_13 Belongs to the bacterial ribosomal protein bL35 family K02916 - - 0.0000000000000000000000000000005404 122.0
BYDH2_k127_8345038_2 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 - 6.1.1.20 6.441e-220 682.0
BYDH2_k127_8345038_3 Lysin motif K06194 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002415 607.0
BYDH2_k127_8345038_4 PFAM aminotransferase, class I K14260 - 2.6.1.2,2.6.1.66 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001634 596.0
BYDH2_k127_8345038_5 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001528 506.0
BYDH2_k127_8345038_6 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001713 474.0
BYDH2_k127_8345038_7 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005048 404.0
BYDH2_k127_8345038_8 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001847 341.0
BYDH2_k127_8345038_9 helix_turn_helix, mercury resistance - - - 0.000000000000000000000000000000000000000000000000000000000000000000007015 235.0
BYDH2_k127_8394724_0 DNA topoisomerase, type IA, central K03169 - 5.99.1.2 0.0 1638.0
BYDH2_k127_8394724_1 Signal transduction histidine kinase - - - 1.894e-301 928.0
BYDH2_k127_8394724_10 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001485 352.0
BYDH2_k127_8394724_11 Belongs to the Smg family K03747 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001809 313.0
BYDH2_k127_8394724_12 - - - - 0.000000000000000000000000000000000000000001435 156.0
BYDH2_k127_8394724_2 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 1.421e-266 825.0
BYDH2_k127_8394724_3 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 - - 2.448e-261 807.0
BYDH2_k127_8394724_4 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA K03500 - 2.1.1.176 2.113e-254 787.0
BYDH2_k127_8394724_5 DNA recombination-mediator protein A K04096 - - 2.55e-217 676.0
BYDH2_k127_8394724_6 Lysin motif - - - 8.419e-211 662.0
BYDH2_k127_8394724_7 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 - 2.1.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003326 454.0
BYDH2_k127_8394724_8 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 - 2.7.4.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007431 407.0
BYDH2_k127_8394724_9 Domain of unknown function (DUF4390) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001092 357.0
BYDH2_k127_8447876_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 2.643e-196 614.0
BYDH2_k127_8447876_1 Uncharacterized ACR, YdiU/UPF0061 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008238 549.0
BYDH2_k127_8447876_2 Sulfotransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000946 459.0
BYDH2_k127_8447876_3 Nacht domain - - - 0.00000000000000000000000000000000000000000000000000000000000000006079 226.0
BYDH2_k127_8447876_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000002156 216.0
BYDH2_k127_8447876_5 Nacht domain - - - 0.000000000000000000000000000000000000000000000000000171 186.0
BYDH2_k127_8499454_0 Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN NodQ subfamily K00955,K00956 - 2.7.1.25,2.7.7.4 0.0 1152.0
BYDH2_k127_851358_0 PDDEXK-like domain of unknown function (DUF3799) K10906 - - 0.000000000000000000000000000006962 131.0
BYDH2_k127_851358_1 - - - - 0.000001196 59.0
BYDH2_k127_851358_2 Participates in initiation and elongation during chromosome replication K02314 - 3.6.4.12 0.000002383 59.0
BYDH2_k127_851358_3 Sh3 type 3 domain protein - - - 0.00004024 51.0
BYDH2_k127_8526298_0 ABC transporter C-terminal domain K15738 - - 0.0 1218.0
BYDH2_k127_8526298_1 Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor K00254 - 1.3.5.2 4.183e-206 644.0
BYDH2_k127_8526298_10 Cytochrome c, class I - - - 0.000000000000000000000000000000000000000000000000000000000007877 207.0
BYDH2_k127_8526298_11 PFAM transposase, IS4 family protein - - - 0.000000000000000000000000006322 113.0
BYDH2_k127_8526298_12 PFAM transposase, IS4 family protein - - - 0.00000000008665 66.0
BYDH2_k127_8526298_2 FtsZ-dependent cytokinesis - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001037 539.0
BYDH2_k127_8526298_3 May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate K21420 - 2.3.2.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001444 467.0
BYDH2_k127_8526298_4 Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine K00684 - 2.3.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005272 449.0
BYDH2_k127_8526298_5 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002917 410.0
BYDH2_k127_8526298_6 Part of a membrane complex involved in electron transport K03616 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003327 411.0
BYDH2_k127_8526298_7 Domain of unknown function (DUF1841) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002154 278.0
BYDH2_k127_8526298_8 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000163 269.0
BYDH2_k127_8526298_9 PFAM Cytochrome c, class I - - - 0.000000000000000000000000000000000000000000000000000000000002908 209.0
BYDH2_k127_8578186_0 FtsX-like permease family K02004 - - 0.0 1518.0
BYDH2_k127_8578186_1 Heavy metal transport detoxification protein K17686,K19597 - 3.6.3.54 0.0 1416.0
BYDH2_k127_8578186_10 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001578 432.0
BYDH2_k127_8578186_11 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001013 415.0
BYDH2_k127_8578186_12 imidazoleglycerol-phosphate dehydratase K01693 - 4.2.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001279 377.0
BYDH2_k127_8578186_13 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008867 364.0
BYDH2_k127_8578186_14 Short-chain dehydrogenase reductase SDR K00059,K03793 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008667,GO:0009058,GO:0009237,GO:0009238,GO:0009239,GO:0009712,GO:0009713,GO:0009987,GO:0016043,GO:0016491,GO:0016627,GO:0016628,GO:0018130,GO:0018958,GO:0019184,GO:0019290,GO:0019438,GO:0019540,GO:0019748,GO:0022607,GO:0034641,GO:0042802,GO:0043043,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044550,GO:0046189,GO:0046483,GO:0051186,GO:0051188,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 1.1.1.100,1.5.1.33 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001832 287.0
BYDH2_k127_8578186_15 Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP K01496,K11755 - 3.5.4.19,3.6.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000007649 244.0
BYDH2_k127_8578186_16 HIT domain K02503 - - 0.0000000000000000000000000000000000000000000000000000000000000000000006379 237.0
BYDH2_k127_8578186_17 phosphoribosyl-ATP diphosphatase activity K01523 - 3.6.1.31 0.0000000000000000000000000000000000000000000000000000000000002497 211.0
BYDH2_k127_8578186_18 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.000000000000000000000000000000000000000000000000000001494 192.0
BYDH2_k127_8578186_19 PPIC-type PPIASE domain K03769 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000004557 184.0
BYDH2_k127_8578186_2 lipid A ABC exporter family, fused ATPase and inner membrane subunits K06147 - - 0.0 1030.0
BYDH2_k127_8578186_20 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation K03117 - - 0.000000000000000000000000000000000000000000000000001172 187.0
BYDH2_k127_8578186_21 - - - - 0.000000000000000000000000000000000000001146 150.0
BYDH2_k127_8578186_22 PFAM Heavy metal transport detoxification protein K07213 - - 0.000000000000000000000000000000004586 128.0
BYDH2_k127_8578186_23 TIGRFAM methyltransferase FkbM family - - - 0.00000000000000002226 86.0
BYDH2_k127_8578186_24 - - - - 0.000000000002573 66.0
BYDH2_k127_8578186_25 Phosphorylase superfamily - - - 0.00000000002966 64.0
BYDH2_k127_8578186_3 Putative S-adenosyl-L-methionine-dependent methyltransferase - - - 1.31e-233 728.0
BYDH2_k127_8578186_4 Lipocalin-like domain - - - 3.128e-231 717.0
BYDH2_k127_8578186_5 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 3.214e-207 647.0
BYDH2_k127_8578186_6 'signal transduction protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008994 561.0
BYDH2_k127_8578186_7 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 GO:0000105,GO:0000162,GO:0003674,GO:0003824,GO:0003949,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006547,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003789 499.0
BYDH2_k127_8578186_8 TIGRFAM Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 GO:0000105,GO:0000162,GO:0003674,GO:0003824,GO:0003949,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006547,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001044 497.0
BYDH2_k127_8578186_9 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000024 489.0
BYDH2_k127_8592788_0 Signal transduction histidine kinase, phosphotransfer (Hpt) - - - 0.0 1024.0
BYDH2_k127_8592788_1 7 transmembrane helices usually fused to an inactive transglutaminase - - - 1.145e-306 943.0
BYDH2_k127_8592788_10 Pyridine nucleotide-disulphide oxidoreductase, dimerisation K00382 GO:0003674,GO:0003824,GO:0004148,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005759,GO:0006082,GO:0006084,GO:0006085,GO:0006086,GO:0006090,GO:0006139,GO:0006163,GO:0006164,GO:0006464,GO:0006637,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0018130,GO:0018335,GO:0019362,GO:0019438,GO:0019538,GO:0019637,GO:0019693,GO:0019752,GO:0031974,GO:0031981,GO:0032787,GO:0032991,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0035383,GO:0035384,GO:0036211,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043436,GO:0043543,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044272,GO:0044281,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045239,GO:0045240,GO:0045252,GO:0045254,GO:0046390,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0061732,GO:0070013,GO:0071616,GO:0071704,GO:0072521,GO:0072522,GO:0072524,GO:0090407,GO:0106077,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902494,GO:1990204,GO:1990234 1.8.1.4 0.000000000000000000000000000000000000000000000000000000000001877 209.0
BYDH2_k127_8592788_2 Putative beta-barrel porin-2, OmpL-like. bbp2 - - - 4.077e-275 849.0
BYDH2_k127_8592788_3 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 1.64e-200 628.0
BYDH2_k127_8592788_4 Serine aminopeptidase, S33 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001296 543.0
BYDH2_k127_8592788_5 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K05807 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001535 510.0
BYDH2_k127_8592788_6 Sugar-transfer associated ATP-grasp - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002172 497.0
BYDH2_k127_8592788_7 Putative ATP-dependant zinc protease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008241 454.0
BYDH2_k127_8592788_8 Universal stress protein K06149 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006348 291.0
BYDH2_k127_8592788_9 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003066 245.0
BYDH2_k127_8746850_0 Peptidase dimerisation domain - - - 2.403e-254 784.0
BYDH2_k127_8746850_1 Trypsin K04771 - 3.4.21.107 4.177e-199 621.0
BYDH2_k127_8746850_2 TIR domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003142 295.0
BYDH2_k127_8746850_3 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000065 263.0
BYDH2_k127_8746850_4 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system K09803 - - 0.0000000000000000000000000000000000000000000000000002943 185.0
BYDH2_k127_8746850_5 ParE toxin of type II toxin-antitoxin system, parDE K06218 - - 0.0000000000000000000000000000000000000000000000000009679 184.0
BYDH2_k127_8746850_6 - - - - 0.0000000000000000000000000000004651 125.0
BYDH2_k127_8746850_7 Bacterial antitoxin of type II TA system, VapB - - - 0.000000000000000000000000004188 111.0
BYDH2_k127_8746850_8 Antitoxin component of a toxin-antitoxin (TA) module K18923 - - 0.0000000000000000000003745 98.0
BYDH2_k127_8751031_0 Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine K12960 - 3.5.4.28,3.5.4.31 3.214e-282 868.0
BYDH2_k127_8751031_1 ABC-type uncharacterized transport system - - - 8.512e-268 827.0
BYDH2_k127_8751031_2 O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway K00568 - 2.1.1.222,2.1.1.64 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000253 480.0
BYDH2_k127_8751031_3 ABC transporter K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001618 448.0
BYDH2_k127_8751031_4 HAD-superfamily hydrolase, subfamily IA, variant 1 K22292 - 3.1.3.105 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007301 441.0
BYDH2_k127_8751031_5 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002144 423.0
BYDH2_k127_8751031_6 Belongs to the ompA family K03286 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001145 335.0
BYDH2_k127_8751031_7 Domain of unknown function (DUF4340) - - - 0.000000000000000000000001988 103.0
BYDH2_k127_8775590_0 Signal transduction response regulator, receiver K03415 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002982 591.0
BYDH2_k127_8775590_1 CAAX protease self-immunity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002191 534.0
BYDH2_k127_8775590_2 Reduction of activated sulfate into sulfite K00390 - 1.8.4.10,1.8.4.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008211 480.0
BYDH2_k127_8775590_3 Belongs to the peptidase S33 family K01259 - 3.4.11.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000262 270.0
BYDH2_k127_8775590_4 2'-5' RNA ligase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005005 267.0
BYDH2_k127_8790711_0 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 - - 1.182e-233 724.0
BYDH2_k127_8790711_1 Belongs to the HpcH HpaI aldolase family K01644,K08691 - 4.1.3.24,4.1.3.25,4.1.3.34 9.866e-201 626.0
BYDH2_k127_8790711_2 ADP-ribosylglycohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009405 568.0
BYDH2_k127_8790711_3 Belongs to the ParB family K03497 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003275 521.0
BYDH2_k127_8790711_4 PFAM Cobyrinic acid a,c-diamide synthase K03496 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003954 482.0
BYDH2_k127_8790711_5 Specifically methylates the N7 position of guanine in position 527 of 16S rRNA K03501 - 2.1.1.170 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001737 376.0
BYDH2_k127_8790711_6 Trm112p-like protein K09791 - - 0.0000000000000000000000000000006062 121.0
BYDH2_k127_8813725_0 M3B, thimet oligopeptidase F K01414 - 3.4.24.70 0.0 1149.0
BYDH2_k127_8813725_1 PFAM Major facilitator superfamily - - - 6.534e-254 786.0
BYDH2_k127_8813725_2 Pyridine nucleotide-disulphide oxidoreductase K05297,K12265 - 1.18.1.1 1.717e-222 692.0
BYDH2_k127_8813725_3 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 4.185e-222 691.0
BYDH2_k127_8813725_4 Peptidyl-prolyl cis-trans isomerase K03769 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001345 485.0
BYDH2_k127_8813725_5 MlaA lipoprotein K04754 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001882 481.0
BYDH2_k127_8813725_6 probably involved in intracellular septation K06190 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007746 357.0
BYDH2_k127_8813725_7 YCII-related domain K09780 - - 0.0000000000000000000000000000000000000000000000002363 177.0
BYDH2_k127_8813725_8 PFAM transposase, IS4 family protein K07481 - - 0.00000000000000000000000000000007862 126.0
BYDH2_k127_8813725_9 Rubredoxin - - - 0.0000000000000008113 77.0
BYDH2_k127_8856738_0 Proton-conducting membrane transporter K00342 - 1.6.5.3 1.359e-270 838.0
BYDH2_k127_8856738_1 Proton-conducting membrane transporter K00342 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002056 521.0
BYDH2_k127_8856738_2 Carboxysome Shell Carbonic Anhydrase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002649 469.0
BYDH2_k127_8856738_3 Phosphorylase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007246 355.0
BYDH2_k127_8856738_4 Carboxysome Shell Carbonic Anhydrase - - - 0.000000000000000000000000000000006481 128.0
BYDH2_k127_8856738_5 PFAM NAD-dependent glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.000000000001866 68.0
BYDH2_k127_8876655_0 Diguanylate cyclase phosphodiesterase with PAS PAC sensor(S) - - - 0.0 1260.0
BYDH2_k127_8876655_1 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009326 513.0
BYDH2_k127_8876655_2 Ion channel - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007459 285.0
BYDH2_k127_8876655_3 SMART ATPase, AAA type, core K06148 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008032 264.0
BYDH2_k127_8876655_4 PFAM Peptidase S8 S53, subtilisin kexin sedolisin - - - 0.000000000000000000000000000000000000000000000000000000000000000000006187 235.0
BYDH2_k127_8897678_0 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase - - - 0.0 2293.0
BYDH2_k127_8897678_1 Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate K00381,K00392 - 1.8.1.2,1.8.7.1 0.0 1162.0
BYDH2_k127_8897678_2 Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN NodQ subfamily K00955,K00956 - 2.7.1.25,2.7.7.4 6.928e-269 828.0
BYDH2_k127_8897678_3 PFAM Alanine dehydrogenase PNT K00324 - 1.6.1.2 2.008e-224 698.0
BYDH2_k127_8897678_4 adenylyltransferase, small subunit K00957 - 2.7.7.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003818 592.0
BYDH2_k127_8897678_5 Reduction of activated sulfate into sulfite K00390 - 1.8.4.10,1.8.4.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000284 491.0
BYDH2_k127_8897678_6 Bacterial protein of unknown function (DUF934) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003087 275.0
BYDH2_k127_8897678_7 4TM region of pyridine nucleotide transhydrogenase, mitoch K00322,K00324 - 1.6.1.1,1.6.1.2 0.000000000000000000000000000000000000000000000000000000008138 199.0
BYDH2_k127_8897678_8 - - - - 0.000000000000000000000000000000000000000000004228 163.0
BYDH2_k127_8910377_0 Cytochrome c-type biogenesis protein CcmF K02198 - - 0.0 1317.0
BYDH2_k127_8910377_1 MFS_1 like family - - - 1.62e-256 792.0
BYDH2_k127_8910377_10 Outer membrane lipoprotein Slp family K07285 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001885 277.0
BYDH2_k127_8910377_11 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02195 - - 0.000000000000000000000000000000000000000000000000000000000000000000002201 235.0
BYDH2_k127_8910377_12 Antibiotic biosynthesis monooxygenase - - - 0.000000000000000000000000000000000000000000000000000003675 191.0
BYDH2_k127_8910377_13 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02196 - - 0.0000000000008281 70.0
BYDH2_k127_8910377_2 Tetratricopeptide repeat K02200 - - 1.691e-247 768.0
BYDH2_k127_8910377_3 alcohol dehydrogenase K00001 - 1.1.1.1 3.453e-217 678.0
BYDH2_k127_8910377_4 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000567 610.0
BYDH2_k127_8910377_5 alpha/beta hydrolase fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004859 541.0
BYDH2_k127_8910377_6 oxidoreductase DsbE K02199 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001998 360.0
BYDH2_k127_8910377_7 subunit of a heme lyase K02200 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004595 307.0
BYDH2_k127_8910377_8 PFAM Alkyl hydroperoxide reductase K03564 GO:0003674,GO:0003824,GO:0004601,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0008379,GO:0009636,GO:0009987,GO:0016209,GO:0016491,GO:0016684,GO:0019725,GO:0033554,GO:0034599,GO:0042221,GO:0042592,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044464,GO:0045454,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0051920,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1990748 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000146 295.0
BYDH2_k127_8910377_9 Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH K02197 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003194 277.0
BYDH2_k127_8966048_0 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 1.106e-278 858.0
BYDH2_k127_8966048_1 Restriction endonuclease, type I, EcoRI, R subunit Type III, Res subunit, N-terminal K01153 - 3.1.21.3 3.895e-244 756.0
BYDH2_k127_8966048_2 PhoH-like protein K06217 - - 2.206e-197 617.0
BYDH2_k127_8966048_3 Transporter associated domain K06189 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001882 551.0
BYDH2_k127_8966048_4 DHH family K07462 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002142 410.0
BYDH2_k127_8966048_5 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001067 293.0
BYDH2_k127_8966048_6 - - - - 0.000000000000000000000000000000000000000000000000000000000000001806 219.0
BYDH2_k127_9026989_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.0 1839.0
BYDH2_k127_9026989_1 Belongs to the peptidase S41A family K03797 - 3.4.21.102 4.228e-293 902.0
BYDH2_k127_9026989_2 Peptidase family M23 - - - 9.237e-226 704.0
BYDH2_k127_9026989_3 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000107 585.0
BYDH2_k127_9026989_4 Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily K01834 - 5.4.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001487 486.0
BYDH2_k127_9026989_5 UBA THIF-type NAD FAD binding K21029 - 2.7.7.80 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006911 444.0
BYDH2_k127_9026989_6 Bacterial regulatory proteins, tetR family K05501 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006912 363.0
BYDH2_k127_9026989_7 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001144 320.0
BYDH2_k127_9026989_8 - - - - 0.00000000000000001052 82.0
BYDH2_k127_9260622_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 - 2.7.7.6 0.0 2696.0
BYDH2_k127_9260622_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 - 2.7.7.6 0.0 2640.0
BYDH2_k127_9260622_2 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003491 419.0
BYDH2_k127_9260622_3 Participates in transcription elongation, termination and antitermination K02601 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004564 326.0
BYDH2_k127_9260622_4 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007858 312.0
BYDH2_k127_9260622_5 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000076 279.0
BYDH2_k127_9260622_6 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.0000000000000000000000000000000000000000000000000000000000125 208.0
BYDH2_k127_9265992_0 - - - - 0.0 1162.0
BYDH2_k127_9265992_1 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455 - - 0.0 1055.0
BYDH2_k127_9265992_2 deaminase zinc-binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001411 364.0
BYDH2_k127_9265992_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001137 261.0
BYDH2_k127_9265992_4 - - - - 0.00000000000000000000000000000000000000000000000000000000001596 206.0
BYDH2_k127_9265992_5 - - - - 0.0000000000000000004198 89.0
BYDH2_k127_9265992_6 Psort location CytoplasmicMembrane, score 10.00 - - - 0.000000000000000001136 85.0
BYDH2_k127_94301_0 ROK family K00845,K00847,K00884 - 2.7.1.2,2.7.1.4,2.7.1.59 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006014 532.0
BYDH2_k127_94301_1 DDE superfamily endonuclease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006388 379.0
BYDH2_k127_94301_2 Homeodomain-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000002885 219.0
BYDH2_k127_94301_3 PEP-CTERM motif - - - 0.000000000000000000000000000000000000000000001344 172.0
BYDH2_k127_94301_4 - - - - 0.0000000000000000000000000005297 115.0
BYDH2_k127_94372_0 Cytochrome C1 family K00413 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003362 455.0
BYDH2_k127_94372_1 SMART Diguanylate phosphodiesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001571 473.0
BYDH2_k127_94372_2 Glutathione S-transferase, N-terminal domain K03599 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001504 399.0
BYDH2_k127_94372_3 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00412 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001406 253.0
BYDH2_k127_94372_4 stringent starvation protein B K03600 - - 0.000000000000000000000000000000000000000000000000000000000000000000006661 236.0
BYDH2_k127_94372_5 transposition K07497 - - 0.000000000000000000000000000000000000000000000000001072 191.0
BYDH2_k127_94372_6 transposition K07497 - - 0.00000000000000000000000000001933 124.0
BYDH2_k127_94372_8 - - - - 0.000003396 49.0
BYDH2_k127_9449951_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0006950,GO:0008144,GO:0008150,GO:0009266,GO:0009314,GO:0009408,GO:0009628,GO:0009987,GO:0016032,GO:0016462,GO:0016465,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019058,GO:0019068,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0035639,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0044183,GO:0044403,GO:0044419,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046872,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051704,GO:0061077,GO:0097159,GO:0097367,GO:0101031,GO:1901265,GO:1901363,GO:1990220 - 3.774e-266 823.0
BYDH2_k127_9449951_1 Glycine-zipper domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000426 302.0
BYDH2_k127_9449951_2 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000003146 233.0
BYDH2_k127_9449951_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000001973 232.0
BYDH2_k127_9449951_4 Protein of unknown function (DUF2934) - - - 0.000000000000000000000000000000000000000000000000168 181.0
BYDH2_k127_9529133_0 Tellurite resistance protein TerB K05801 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003622 492.0
BYDH2_k127_9529133_1 Transport permease protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000113 466.0
BYDH2_k127_9529133_2 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002234 428.0
BYDH2_k127_9529133_3 Belongs to the BolA IbaG family - - - 0.000000000000000000000000000000000000000000001207 165.0
BYDH2_k127_9529133_4 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.0000000000000000000000000000000000002842 141.0
BYDH2_k127_9607147_0 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 0.0 1347.0
BYDH2_k127_9607147_1 - - - - 0.000000000000000000000000001201 114.0
BYDH2_k127_9610424_0 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 1.33e-206 642.0
BYDH2_k127_9610424_1 PFAM Aminotransferase, class IV K00824 - 2.6.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001292 548.0
BYDH2_k127_9610424_2 Belongs to the peptidase S11 family K01286,K07258 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006614 388.0
BYDH2_k127_9610424_3 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 - 2.3.1.181 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005368 343.0
BYDH2_k127_9610424_4 Belongs to the UPF0250 family K09158 - - 0.000000000000000000000000000000000000000000000005725 172.0
BYDH2_k127_9610424_5 OsmC-like protein K07397 - - 0.000000000000000000000000000000000000004279 145.0
BYDH2_k127_970396_0 Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps K04084 - 1.8.1.8 0.0 1000.0
BYDH2_k127_970396_1 Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine cysteine desulfurase (IscS) system K14058 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001571 581.0
BYDH2_k127_970396_2 Thioredoxin-like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001358 359.0
BYDH2_k127_970396_3 Protein of unknown function, DUF - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001556 355.0
BYDH2_k127_970396_4 Cytochrome c, class I - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002259 310.0
BYDH2_k127_970396_5 PFAM Blue (type 1) copper domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001033 296.0
BYDH2_k127_970396_6 Protein of Unknown function (DUF2784) - - - 0.000000000000000000000000000000000000000000000000000000000000000001163 228.0
BYDH2_k127_970396_7 PFAM transport-associated K04065 - - 0.000000000000000000000000000000000000000000000000009286 181.0
BYDH2_k127_970396_8 - - - - 0.00000000000000000000000000000000000000000005894 164.0
BYDH2_k127_970396_9 PFAM NAD-dependent glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.000000000000001501 79.0
BYDH2_k127_9740569_0 Belongs to the CarB family K01955 - 6.3.5.5 0.0 2072.0
BYDH2_k127_9740569_1 Cytochrome c1 - - - 0.0 1257.0
BYDH2_k127_9740569_10 Belongs to the CarA family K01956 - 6.3.5.5 7.419e-247 763.0
BYDH2_k127_9740569_11 TIGRFAM phosphate binding protein K02040 - - 5.564e-201 627.0
BYDH2_k127_9740569_12 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006208 589.0
BYDH2_k127_9740569_13 DDE superfamily endonuclease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002058 523.0
BYDH2_k127_9740569_14 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 - 2.5.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009858 503.0
BYDH2_k127_9740569_15 Belongs to the NadC ModD family K00767 - 2.4.2.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004648 460.0
BYDH2_k127_9740569_16 Mut7-C ubiquitin K09122 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001043 454.0
BYDH2_k127_9740569_17 Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit K02427 - 2.1.1.166 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007622 392.0
BYDH2_k127_9740569_18 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002929 295.0
BYDH2_k127_9740569_19 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000142 290.0
BYDH2_k127_9740569_2 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009056,GO:0009057,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019538,GO:0030163,GO:0042623,GO:0042802,GO:0043170,GO:0044238,GO:0044464,GO:0070011,GO:0071704,GO:0071944,GO:0140096,GO:1901564,GO:1901565,GO:1901575 - 0.0 1241.0
BYDH2_k127_9740569_20 CRS1_YhbY K07574 - - 0.00000000000000000000000000000000000000000000000000000000002282 207.0
BYDH2_k127_9740569_21 hmm pf01609 K07481 - - 0.000000000000000000000000000000000000000000009043 167.0
BYDH2_k127_9740569_22 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.000000000000000000000000000000000000000007113 155.0
BYDH2_k127_9740569_25 SMART Diguanylate phosphodiesterase - - - 0.0000000000003999 70.0
BYDH2_k127_9740569_3 TIGRFAM Oxaloacetate decarboxylase, alpha subunit K01960 - 6.4.1.1 0.0 1171.0
BYDH2_k127_9740569_4 Belongs to the glutamate synthase family - - - 6.98e-321 983.0
BYDH2_k127_9740569_5 TIGRFAM Acetyl-CoA carboxylase, biotin carboxylase K01959 - 6.4.1.1 6.529e-303 933.0
BYDH2_k127_9740569_6 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 4.589e-292 897.0
BYDH2_k127_9740569_7 Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme K02302,K02303 - 1.3.1.76,2.1.1.107,4.99.1.4 3.477e-281 867.0
BYDH2_k127_9740569_8 Belongs to the 5'-nucleotidase family K01081 - 3.1.3.5 3.486e-279 864.0
BYDH2_k127_9740569_9 Cytochrome P450 - - - 2.736e-276 850.0
BYDH2_k127_9821070_0 PFAM Glycosyl transferase, family 2 K00721,K00786 - 2.4.1.83 0.0 1636.0
BYDH2_k127_9821070_1 Polysaccharide biosynthesis protein - - - 0.0 1151.0
BYDH2_k127_9821070_10 malonyl CoA-acyl carrier protein transacylase K00645,K13935,K15355 - 2.3.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003822 554.0
BYDH2_k127_9821070_11 PFAM Zinc iron permease K16267 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001006 484.0
BYDH2_k127_9821070_12 Belongs to the multicopper oxidase YfiH RL5 family K05810 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001013 475.0
BYDH2_k127_9821070_13 glycosyl transferase, family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002283 464.0
BYDH2_k127_9821070_14 Glycerophosphoryl diester phosphodiesterase family K01126 - 3.1.4.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003752 461.0
BYDH2_k127_9821070_15 Short-chain dehydrogenase reductase SDR K00059 GO:0003674,GO:0003824,GO:0006725,GO:0008150,GO:0008152,GO:0009987,GO:0010130,GO:0016043,GO:0016491,GO:0016614,GO:0016616,GO:0018913,GO:0018915,GO:0022607,GO:0042537,GO:0043933,GO:0044085,GO:0044237,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:1901360 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002739 454.0
BYDH2_k127_9821070_16 Protoglobin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001014 411.0
BYDH2_k127_9821070_17 Maf-like protein K06287 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004519 355.0
BYDH2_k127_9821070_18 Uncharacterized ACR, COG1399 K07040 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001807 322.0
BYDH2_k127_9821070_19 Protein of unknown function (DUF4019) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006015 250.0
BYDH2_k127_9821070_2 PFAM FAD dependent oxidoreductase K00111 - 1.1.5.3 5.825e-321 985.0
BYDH2_k127_9821070_20 - - - - 0.0000000000000000000000000000000000000000000000000000000000009099 211.0
BYDH2_k127_9821070_21 Glycosyl transferase family 4 K13007 - - 0.00000000000000000000000000000000000000002526 152.0
BYDH2_k127_9821070_22 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.000000000000000000000000000000000000003621 146.0
BYDH2_k127_9821070_23 Belongs to the bacterial ribosomal protein bL32 family K02911 - - 0.000000000000000000000000000000001548 129.0
BYDH2_k127_9821070_3 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K00646,K09458 GO:0003674,GO:0003824,GO:0004312,GO:0004315,GO:0016740,GO:0016746,GO:0016747,GO:0033817 2.3.1.179 3.451e-261 806.0
BYDH2_k127_9821070_4 outer membrane efflux protein K15725 - - 1.383e-236 740.0
BYDH2_k127_9821070_5 Ankyrin repeat K06867 - - 8.067e-224 696.0
BYDH2_k127_9821070_6 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 1.43e-214 668.0
BYDH2_k127_9821070_7 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 GO:0003674,GO:0003824,GO:0004370,GO:0005975,GO:0006066,GO:0006071,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019751,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0071704,GO:1901615 2.7.1.30 3.358e-213 672.0
BYDH2_k127_9821070_8 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 2.484e-204 636.0
BYDH2_k127_9821070_9 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 1.671e-195 612.0
BYDH2_k127_9962539_0 PFAM Major facilitator superfamily MFS-1 - - - 1.543e-253 785.0
BYDH2_k127_9962539_1 Ribosomal RNA adenine dimethylase - - - 9.289e-204 635.0
BYDH2_k127_9962539_2 Polyphosphate kinase 2 (PPK2) K22468 - 2.7.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004482 573.0
BYDH2_k127_9962539_3 PIN domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004082 279.0
BYDH2_k127_9962539_4 Uncharacterized protein conserved in bacteria (DUF2130) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002059 279.0
BYDH2_k127_9962539_5 Glutathione S-transferase, N-terminal domain K00799,K11209 - 2.5.1.18 0.00000005937 54.0