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Overview

ID MAG00167
Name BYDH2_bin.17
Sample SMP0005
Taxonomy
Kingdom Bacteria
Phylum Pseudomonadota
Class Gammaproteobacteria
Order SG8-11
Family SG8-11
Genus UBA6921
Species
Assembly information
Completeness (%) 61.23
Contamination (%) 1.49
GC content (%) 59.0
N50 (bp) 3,821
Genome size (bp) 1,850,114

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes2015

Gene name Description KEGG GOs EC E-value Score Sequence
BYDH2_k127_10021232_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes K02405 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001028 276.0
BYDH2_k127_10021232_1 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.00000000000000000000000000000000000000000000000000000000000005219 216.0
BYDH2_k127_10021232_2 signal transduction histidine kinase - - - 0.0000000000000000000000000000000000000000000005124 184.0
BYDH2_k127_10021232_3 PFAM Sel1 domain protein repeat-containing protein K07126 - - 0.0000000000000000000000003338 114.0
BYDH2_k127_10021232_4 protein conserved in bacteria K09920 - - 0.000000000001478 73.0
BYDH2_k127_10021232_5 response regulator - - - 0.000000000009902 69.0
BYDH2_k127_10032682_0 PFAM Transketolase central region K00162,K21417 - 1.2.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001655 577.0
BYDH2_k127_10032682_1 Dehydrogenase E1 component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000278 520.0
BYDH2_k127_10032682_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001068 342.0
BYDH2_k127_10032682_3 2OG-Fe(II) oxygenase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001706 292.0
BYDH2_k127_10032682_4 - - - - 0.000000000000000000000000000000000000000000000000000004963 199.0
BYDH2_k127_10032682_5 Sel1-like repeats. - - - 0.000000000000000000000000000000000000000000000002188 177.0
BYDH2_k127_10032682_6 e3 binding domain K00382 - 1.8.1.4 0.00000000000000000000000000000000001481 137.0
BYDH2_k127_10032682_7 - - - - 0.000000000000000000000000000004916 127.0
BYDH2_k127_10032682_8 Cytochrome c - - - 0.00000000000000000000000019 108.0
BYDH2_k127_10042782_0 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03564 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000004288 198.0
BYDH2_k127_10042782_1 Signal transduction protein - - - 0.0000000000000000000000002204 115.0
BYDH2_k127_10042782_2 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995,K08744 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0006629,GO:0006644,GO:0006650,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008444,GO:0008610,GO:0008654,GO:0009058,GO:0009987,GO:0016020,GO:0016021,GO:0016740,GO:0016772,GO:0016780,GO:0017169,GO:0019637,GO:0031224,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044425,GO:0044464,GO:0045017,GO:0046474,GO:0046486,GO:0071704,GO:0071944,GO:0090407,GO:1901576 2.7.8.41,2.7.8.5 0.000000000000000000000004647 103.0
BYDH2_k127_10056273_0 Chemotaxis K13924 - 2.1.1.80,3.1.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000351 329.0
BYDH2_k127_10056273_1 GGDEF domain - - - 0.0000000000000000000000000000000001291 145.0
BYDH2_k127_10056593_0 glucose sorbosone - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006485 515.0
BYDH2_k127_10056593_1 PFAM EAL domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003092 306.0
BYDH2_k127_10056861_0 Putative diguanylate phosphodiesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004298 528.0
BYDH2_k127_10056861_1 Belongs to the DEAD box helicase family K11927 - 3.6.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002993 503.0
BYDH2_k127_10056861_2 General secretion pathway protein F K02455 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001562 421.0
BYDH2_k127_10056861_3 EVE domain - - - 0.00000000000000000000000000000000000000000000000000000000000000001309 227.0
BYDH2_k127_10056861_4 Rhodanese Homology Domain K03972 GO:0003674,GO:0003824,GO:0004792,GO:0005575,GO:0005623,GO:0016740,GO:0016782,GO:0016783,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0044464 - 0.0000001975 59.0
BYDH2_k127_10060918_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000338 476.0
BYDH2_k127_10060918_1 Protein of unknown function (DUF3106) - - - 0.000000001175 63.0
BYDH2_k127_10061990_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01539 - 3.6.3.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002717 492.0
BYDH2_k127_10061990_1 TIGRFAM hydrolase, TatD family K03424 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004081 323.0
BYDH2_k127_10104707_0 Arginyl-tRNA synthetase K01887 - 6.1.1.19 2.094e-202 637.0
BYDH2_k127_10104707_1 Flavin containing amine oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001554 285.0
BYDH2_k127_10104707_2 Sporulation related domain - - - 0.000000000000000000000000000000001805 136.0
BYDH2_k127_10121653_0 Diguanylate cyclase K02488 - 2.7.7.65 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006945 308.0
BYDH2_k127_10121653_1 HDOD domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000005443 239.0
BYDH2_k127_10121653_2 Catalyzes the dehydration of methylthioribulose-1- phosphate (MTRu-1-P) into 2,3-diketo-5-methylthiopentyl-1- phosphate (DK-MTP-1-P) K08964 - 4.2.1.109 0.00000000000000000000000000000000000000000000002938 175.0
BYDH2_k127_10124008_0 Type II secretion system (T2SS), protein E, N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000142 554.0
BYDH2_k127_10124008_1 NAD(P)H-binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001692 265.0
BYDH2_k127_10124008_2 Thioredoxin - - - 0.000000000000000000000000000000000000000000000000000000004397 209.0
BYDH2_k127_10124008_3 Belongs to the DsbB family K03611 - - 0.00000000000000000000000000001942 119.0
BYDH2_k127_10125107_0 NMT1-like family - - - 2.203e-202 636.0
BYDH2_k127_10125107_1 COG0600 ABC-type nitrate sulfonate bicarbonate transport system, permease component K15577 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002072 417.0
BYDH2_k127_10125107_2 ABC-type nitrate sulfonate bicarbonate transport system ATPase component K02049,K15578 - - 0.0000000000000000000000000000000000000000000000002828 177.0
BYDH2_k127_10125107_3 response regulator K07183 - - 0.0000000000000000000000000003087 116.0
BYDH2_k127_10153105_0 Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) K01626 - 2.5.1.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004223 522.0
BYDH2_k127_10153105_1 Specifically methylates the adenine in position 2030 of 23S rRNA K07115 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0008988,GO:0009451,GO:0009987,GO:0010467,GO:0015976,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036307,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.266 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003042 335.0
BYDH2_k127_10153105_2 Sodium Bile acid symporter family K03453 - - 0.000000000000000000000000000000000000000000000000000000002117 205.0
BYDH2_k127_10153105_3 - - - - 0.000000000000000005993 87.0
BYDH2_k127_10153105_4 Protein of unknown function (DUF3301) - - - 0.0000000000001597 72.0
BYDH2_k127_10153105_5 small protein containing a coiled-coil domain - - - 0.000000009122 60.0
BYDH2_k127_10170623_0 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019003,GO:0022613,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0036094,GO:0042254,GO:0042274,GO:0043167,GO:0043168,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0071840,GO:0097159,GO:0097367,GO:1901265,GO:1901363 3.1.3.100 0.000000000000000000000000000000000000000000000000000000000000000007669 231.0
BYDH2_k127_10170623_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000001369 233.0
BYDH2_k127_10192849_0 Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source K02224 - 6.3.5.11,6.3.5.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001031 585.0
BYDH2_k127_10192849_1 Histidine kinase K07673 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003347 338.0
BYDH2_k127_10192849_2 response regulator receiver K07684 - - 0.00000000000000000000000000000000000000000000000000000000004604 211.0
BYDH2_k127_10192849_3 Belongs to the HesB IscA family K13628 - - 0.00000000000000000000008456 101.0
BYDH2_k127_10210563_0 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001153 419.0
BYDH2_k127_10210563_1 HflC and HflK could encode or regulate a protease K04088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007352 366.0
BYDH2_k127_10210563_2 RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs K03666 - - 0.00000000000000000000000000000000001798 138.0
BYDH2_k127_10264880_0 Belongs to the ALAD family K01698 - 4.2.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001851 427.0
BYDH2_k127_10264880_1 Conserved repeat domain - - - 0.0000004838 62.0
BYDH2_k127_10274588_0 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006756 395.0
BYDH2_k127_10274588_1 Sel1 domain protein repeat-containing protein K07126 - - 0.000000000000000000003028 102.0
BYDH2_k127_10280717_0 protein conserved in bacteria - GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0009897,GO:0009986,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0031233,GO:0044425,GO:0044459,GO:0044464,GO:0071575,GO:0071944,GO:0098552 - 0.0000000000000000000000000000000000000009563 156.0
BYDH2_k127_10280717_1 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K17713 GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0016491,GO:0055114 - 0.00000000000000000000000000000000001043 143.0
BYDH2_k127_10280717_2 PFAM tRNA synthetase class II (G H P and S) K01892 - 6.1.1.21 0.0000000000000000000000003048 106.0
BYDH2_k127_10282064_0 PFAM Aminotransferase class-III K00819 - 2.6.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007618 562.0
BYDH2_k127_10282064_1 Cytochrome c bacterial - - - 0.00000000000000000000000000000000000001692 159.0
BYDH2_k127_10282064_2 Arginase family K01476 - 3.5.3.1 0.000000000000000000000000000000000005771 140.0
BYDH2_k127_1032795_0 PFAM Major Facilitator Superfamily K08218 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003498 428.0
BYDH2_k127_1032795_1 Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide-linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N-acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides K01207 GO:0000270,GO:0003674,GO:0003824,GO:0004553,GO:0004563,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006022,GO:0006807,GO:0008150,GO:0008152,GO:0009254,GO:0009273,GO:0009987,GO:0015929,GO:0016787,GO:0016798,GO:0030203,GO:0042546,GO:0043170,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901564 3.2.1.52 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004258 358.0
BYDH2_k127_1032795_2 L,D-transpeptidase catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000001786 221.0
BYDH2_k127_10337215_0 ATP-dependent helicase K03579 - 3.6.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003948 574.0
BYDH2_k127_10337215_1 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001543 312.0
BYDH2_k127_10359805_0 Sulfatase-modifying factor enzyme 1 - - - 0.00000000000000000000000000000000000000000000000000000000000001901 225.0
BYDH2_k127_10359805_1 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 0.00000000000000000000000000000197 123.0
BYDH2_k127_10359805_2 PFAM peptidase S8 and S53 subtilisin kexin sedolisin K08651 - 3.4.21.66 0.00001419 54.0
BYDH2_k127_10372426_0 nitrogen fixation sensor protein fixL K14986 - 2.7.13.3 0.00000000000000000000000000006647 133.0
BYDH2_k127_10372426_1 Belongs to the ompA family K03640 GO:0005575,GO:0005623,GO:0008150,GO:0009279,GO:0009987,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031224,GO:0031230,GO:0031241,GO:0031246,GO:0031975,GO:0032153,GO:0044425,GO:0044462,GO:0044464,GO:0051301,GO:0071944,GO:0098552 - 0.000000000000000000009566 95.0
BYDH2_k127_10387604_0 ABC transporter permease K02066 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005641 364.0
BYDH2_k127_10387604_1 Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005465 291.0
BYDH2_k127_10387604_2 MlaD protein K02067 - - 0.000000000000000000000000000000000000000000000000000000000003032 212.0
BYDH2_k127_10387604_3 PFAM ABC transporter K02065 - - 0.00000000000000000000000000000000000000000000000006105 179.0
BYDH2_k127_10429756_0 PFAM EAL domain K21025 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000151 526.0
BYDH2_k127_10429756_1 Belongs to the peptidase M48B family K03799 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005114 443.0
BYDH2_k127_10429756_2 - - - - 0.000001824 53.0
BYDH2_k127_10441559_0 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004187 472.0
BYDH2_k127_10441559_1 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004424 445.0
BYDH2_k127_1044167_0 Type II and III secretion system protein K02453 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003109 329.0
BYDH2_k127_1044167_1 AAA domain - - - 0.000000001683 65.0
BYDH2_k127_10451961_0 Catalyzes the biosynthesis of agmatine from arginine K01585 - 4.1.1.19 7.782e-254 798.0
BYDH2_k127_10451961_1 Histidine kinase K02482,K14986 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000023 395.0
BYDH2_k127_10451961_2 COG4566 Response regulator - - - 0.00000000000000000000000000000000000000000000000000000000004775 212.0
BYDH2_k127_10451961_3 COG1253 Hemolysins and related - - - 0.0000000000000000000000000000000000000001793 155.0
BYDH2_k127_10475540_0 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001575 483.0
BYDH2_k127_10475540_1 response regulator K20977 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001279 396.0
BYDH2_k127_10475540_2 Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis K03411 - 3.5.1.44 0.000000000000000000000000000000000000000000000000000000000000000000000002462 250.0
BYDH2_k127_10475540_3 Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP K00575 - 2.1.1.80 0.00000000000000000000000000000000000000000000000000000000000000000001221 236.0
BYDH2_k127_10475540_4 Anti-anti-sigma regulatory factor (Antagonist of anti-sigma factor) K20978 - - 0.0000000000000000000000000006677 115.0
BYDH2_k127_10519070_0 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 6.474e-207 656.0
BYDH2_k127_10519070_1 Belongs to the 'phage' integrase family. XerC subfamily K03733 GO:0000150,GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006259,GO:0006276,GO:0006310,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008907,GO:0009009,GO:0009037,GO:0009987,GO:0015074,GO:0032991,GO:0034641,GO:0042150,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0048476,GO:0071139,GO:0071704,GO:0090304,GO:0097159,GO:0140097,GO:1901360,GO:1901363 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001537 295.0
BYDH2_k127_10519070_2 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 - 3.4.25.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001184 290.0
BYDH2_k127_10519070_3 Polyprenyl synthetase K00795,K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.0000000000000000000000000000003966 128.0
BYDH2_k127_10521371_0 Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross-linking of the peptide subunits) K05365 - 2.4.1.129,3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008915 439.0
BYDH2_k127_10521371_1 PFAM Transglycosylase SLT domain K08307 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000398 367.0
BYDH2_k127_10521371_2 ABC transporter K02065 - - 0.0000000000000000000000000000000000000000000000000000000006403 206.0
BYDH2_k127_10521371_3 EamA-like transporter family - - - 0.00000000000000000000000000000003141 133.0
BYDH2_k127_10581986_0 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611,K09065,K13252 - 2.1.3.3,2.1.3.6,2.1.3.9 0.0000000000000000000000000000000000000000000000000000000000001521 214.0
BYDH2_k127_10581986_1 COG0604 NADPH quinone reductase and related Zn-dependent K00344 - 1.6.5.5 0.00000000000000000000000000000000000000000000000000000000001601 210.0
BYDH2_k127_10581986_2 COG2863 Cytochrome c553 - - - 0.00000000000000000000000000000000000000001112 161.0
BYDH2_k127_10581986_3 SH3 domain K07184 - - 0.0000000000000000000000000000000000001104 149.0
BYDH2_k127_106019_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003054 597.0
BYDH2_k127_106019_1 endonuclease III - - - 0.0000000000000000000000000000000000000000000000000000004281 200.0
BYDH2_k127_106019_2 Domain of unknown function (DUF1857) - - - 0.0000000000000000000000000000000000008323 145.0
BYDH2_k127_106019_4 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.0003504 43.0
BYDH2_k127_10614597_0 Diguanylate cyclase - - - 1.011e-204 666.0
BYDH2_k127_10614597_1 Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme K02302 - 1.3.1.76,2.1.1.107,4.99.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006798 531.0
BYDH2_k127_10614597_2 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 GO:0002161,GO:0003674,GO:0003824,GO:0004812,GO:0004827,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006433,GO:0006450,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0043906,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008499 344.0
BYDH2_k127_10614597_3 PFAM Lytic transglycosylase catalytic - - - 0.000000000000000000000000000000000000000000000000000000000001535 215.0
BYDH2_k127_10614597_4 lactoylglutathione lyase activity - - - 0.00000000003637 69.0
BYDH2_k127_10658493_0 Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB NOP family K03500 - 2.1.1.176 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001863 363.0
BYDH2_k127_10658493_1 cytochrome - - - 0.000000000000000000000000000000000000002991 154.0
BYDH2_k127_10712517_0 Involved in the TonB-independent uptake of proteins K03641 GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006810,GO:0008104,GO:0008150,GO:0009719,GO:0009987,GO:0010033,GO:0010243,GO:0015031,GO:0015833,GO:0015893,GO:0017038,GO:0019904,GO:0030288,GO:0030313,GO:0031975,GO:0032153,GO:0032991,GO:0033036,GO:0042221,GO:0042493,GO:0042597,GO:0042886,GO:0042891,GO:0043213,GO:0044464,GO:0044877,GO:0045184,GO:0046677,GO:0046678,GO:0050896,GO:0051179,GO:0051234,GO:0051716,GO:0070887,GO:0071236,GO:0071237,GO:0071310,GO:0071417,GO:0071495,GO:0071702,GO:0071705,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001575 458.0
BYDH2_k127_10712517_1 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 - 4.3.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001671 343.0
BYDH2_k127_10712517_2 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) K06920 - 6.3.4.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005696 338.0
BYDH2_k127_10712517_3 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.00000000000000000000000000000000000000000000000002061 188.0
BYDH2_k127_10712517_4 MotA TolQ ExbB proton channel K03562 - - 0.00000000000000000000000000000000000000000000000003905 179.0
BYDH2_k127_10712517_5 Biopolymer transport protein ExbD TolR K03560 - - 0.000000000000000000000000000000000000000000003097 173.0
BYDH2_k127_10712517_6 Belongs to the ompA family K03640 GO:0005575,GO:0005623,GO:0008150,GO:0009279,GO:0009987,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031224,GO:0031230,GO:0031241,GO:0031246,GO:0031975,GO:0032153,GO:0044425,GO:0044462,GO:0044464,GO:0051301,GO:0071944,GO:0098552 - 0.000000000000000000000000000000000001495 145.0
BYDH2_k127_10712517_7 TolA C-terminal K03646 - - 0.0000000000000000000000000000009902 132.0
BYDH2_k127_10714840_0 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000896 434.0
BYDH2_k127_10714840_1 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003499 350.0
BYDH2_k127_10714840_2 PFAM Mur ligase K11754 - 6.3.2.12,6.3.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007162 300.0
BYDH2_k127_10714840_3 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 GO:0000162,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.2.1.20 0.00000000000000000000000000000000000000001006 154.0
BYDH2_k127_10727683_0 E3 component of 2-oxoglutarate dehydrogenase complex K00382 GO:0003674,GO:0003824,GO:0004148,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005759,GO:0006082,GO:0006084,GO:0006085,GO:0006086,GO:0006090,GO:0006139,GO:0006163,GO:0006164,GO:0006464,GO:0006637,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0018130,GO:0018335,GO:0019362,GO:0019438,GO:0019538,GO:0019637,GO:0019693,GO:0019752,GO:0031974,GO:0031981,GO:0032787,GO:0032991,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0035383,GO:0035384,GO:0036211,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043436,GO:0043543,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044272,GO:0044281,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045239,GO:0045240,GO:0045252,GO:0045254,GO:0046390,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0061732,GO:0070013,GO:0071616,GO:0071704,GO:0072521,GO:0072522,GO:0072524,GO:0090407,GO:0106077,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902494,GO:1990204,GO:1990234 1.8.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003141 365.0
BYDH2_k127_10727683_1 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.0000000000000000000000000000000002355 132.0
BYDH2_k127_10727683_2 Protein of unknown function (DUF2905) - - - 0.0000000000000000000000001585 107.0
BYDH2_k127_10727683_3 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000004865 108.0
BYDH2_k127_10732797_0 PFAM TrkA-N domain K03499 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000704 563.0
BYDH2_k127_10732797_1 Response regulator receiver - - - 0.0000000000000000000000000000000000000000000000000000003349 198.0
BYDH2_k127_10759750_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03092 GO:0000976,GO:0001067,GO:0001130,GO:0001216,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0006355,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0019219,GO:0019222,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032991,GO:0032993,GO:0043565,GO:0044212,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902680,GO:1903506,GO:1903508,GO:1990837,GO:2000112,GO:2001141 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001706 567.0
BYDH2_k127_10759750_1 ABC-type (Unclassified) transport system, ATPase component K06861 - - 0.0000000000000000000000000000000000000000000001008 169.0
BYDH2_k127_10759750_2 Sigma 54 modulation protein K05808 - - 0.000000000000000000000000000000006937 130.0
BYDH2_k127_10759750_3 PTS IIA-like nitrogen-regulatory protein PtsN K02806 - - 0.000000000009785 66.0
BYDH2_k127_10760035_0 PFAM carbohydrate kinase K00854 - 2.7.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000006606 247.0
BYDH2_k127_10760035_1 Belongs to the SOS response-associated peptidase family - - - 0.000000000000000000000000000000000000000000000000000000000001034 216.0
BYDH2_k127_10760035_2 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.0000000000000000000000000000000000000000000000000333 188.0
BYDH2_k127_10760035_3 Cation transporter/ATPase, N-terminus K01537 - 3.6.3.8 0.0000000000000001973 80.0
BYDH2_k127_10773079_0 Metallo-beta-lactamase superfamily K13075 - 3.1.1.81 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003166 381.0
BYDH2_k127_10773079_1 fatty acid desaturase - - - 0.0000000000000000000000000000000000000000008965 158.0
BYDH2_k127_10773079_2 EamA-like transporter family - - - 0.00000000000000000000000000000000000004643 146.0
BYDH2_k127_10793984_0 Domain of unknown function (DUF3458_C) ARM repeats K01256 - 3.4.11.2 1.689e-225 711.0
BYDH2_k127_10793984_1 associated with various cellular activities K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009108 294.0
BYDH2_k127_10793984_3 Protein of unknown function (DUF1501) - - - 0.000004014 59.0
BYDH2_k127_10799427_0 glutamate--cysteine ligase K01919 - 6.3.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002059 575.0
BYDH2_k127_10799427_1 response regulator K02657 - - 0.00000000000000000000000000000000000000000000000000000000000008257 214.0
BYDH2_k127_10799427_2 cheY-homologous receiver domain K02658 - - 0.0000000000000000000000000000000000000000000000005845 177.0
BYDH2_k127_10799427_3 Type IV pili signal transduction protein PilI K02659 - - 0.00000000000000000000000000000000000001246 155.0
BYDH2_k127_10799427_4 chemotaxis, protein K02660 - - 0.0000000000000000001077 93.0
BYDH2_k127_1080173_0 Protein of unknown function (DUF1631) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001407 284.0
BYDH2_k127_1080173_1 Belongs to the NadC ModD family K00767 GO:0003674,GO:0003824,GO:0004514,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016054,GO:0016740,GO:0016757,GO:0016763,GO:0017144,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0034213,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0042737,GO:0043436,GO:0043648,GO:0043649,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046395,GO:0046483,GO:0046496,GO:0046700,GO:0046874,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0072526,GO:0090407,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605 2.4.2.19 0.000000000000000000000000001231 113.0
BYDH2_k127_10849447_0 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002379 489.0
BYDH2_k127_10849447_1 COG3221 ABC-type phosphate phosphonate transport system, periplasmic component K02044 - - 0.000000000000000000000000000000000000002908 157.0
BYDH2_k127_10849447_2 ABC transporter, phosphonate, periplasmic substrate-binding protein K02044 - - 0.000000000000000000000000000001175 132.0
BYDH2_k127_10850800_0 Belongs to the transferase hexapeptide repeat family K00674 - 2.3.1.117 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002413 291.0
BYDH2_k127_10850800_1 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000001105 202.0
BYDH2_k127_10874003_0 saccharopine dehydrogenase activity K00290 - 1.5.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001669 499.0
BYDH2_k127_10874003_2 Response regulator receiver K03413 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005975 261.0
BYDH2_k127_10874003_3 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000000000000000002217 173.0
BYDH2_k127_10874003_4 Pyridine nucleotide-disulphide oxidoreductase K05297,K12265 - 1.18.1.1 0.000006107 49.0
BYDH2_k127_10946656_0 diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001494 481.0
BYDH2_k127_10946656_1 Thioredoxin - - - 0.000000000000000000000000000000000000000000001505 167.0
BYDH2_k127_10946656_2 - - - - 0.000000000000000000000003131 105.0
BYDH2_k127_10962555_0 COG3157 Hemolysin-coregulated protein K11903 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000993 303.0
BYDH2_k127_10962555_1 PFAM Protein phosphatase 2C K01090,K20074 - 3.1.3.16 0.000000000000000000000000000000000000000000000000000000000001774 216.0
BYDH2_k127_10962555_2 YoeB-like toxin of bacterial type II toxin-antitoxin system K19158 - - 0.00000000000000000000000000000002641 127.0
BYDH2_k127_10962555_3 Antitoxin component of a toxin-antitoxin (TA) module - - - 0.000000000000000000001468 96.0
BYDH2_k127_11011105_0 Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor K00697 - 2.4.1.15,2.4.1.347 8.55e-321 996.0
BYDH2_k127_11011105_1 glucan 1,4-alpha-glucosidase activity K01178 - 3.2.1.3 0.000000000000000000000000000000000000000000000000007211 184.0
BYDH2_k127_11046621_0 Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate K01952 GO:0000166,GO:0003674,GO:0003824,GO:0004642,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006520,GO:0006541,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009064,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016874,GO:0016879,GO:0016884,GO:0016887,GO:0017076,GO:0017111,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605 6.3.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001149 398.0
BYDH2_k127_11046621_1 chemotaxis K03406 - - 0.00000000000000000000000000000000000000003411 155.0
BYDH2_k127_11048676_0 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 3.188e-229 713.0
BYDH2_k127_11048676_1 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K11991 - 3.5.4.33 0.00000000000000000000000000000002951 129.0
BYDH2_k127_11064044_0 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 - 2.2.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002825 403.0
BYDH2_k127_11064044_1 TIGRFAM cold shock domain protein CspD K03704 GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006275,GO:0006355,GO:0006950,GO:0008150,GO:0008156,GO:0009266,GO:0009409,GO:0009605,GO:0009628,GO:0009889,GO:0009890,GO:0009892,GO:0009991,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031667,GO:0042594,GO:0044424,GO:0044444,GO:0044464,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051053,GO:0051171,GO:0051172,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1903506,GO:2000112,GO:2000113,GO:2001141 - 0.000000000000000000001888 97.0
BYDH2_k127_11064044_2 PFAM Formylglycine-generating sulfatase enzyme - - - 0.00000000000000002206 90.0
BYDH2_k127_11064831_0 UPF0313 protein - - - 0.0 1124.0
BYDH2_k127_11064831_1 PFAM Auxin Efflux Carrier K07088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001353 325.0
BYDH2_k127_11064831_2 diguanylate cyclase - - - 0.000000000000000000002991 95.0
BYDH2_k127_11064831_3 heat shock protein binding - - - 0.00000004154 61.0
BYDH2_k127_11097366_0 Protein tyrosine kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000153 544.0
BYDH2_k127_11097366_1 histone H2A K63-linked ubiquitination - - - 0.00000000000000003411 87.0
BYDH2_k127_11113563_0 sigma54 specific, transcriptional regulator, Fis family K10941 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001197 546.0
BYDH2_k127_11113563_1 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000005797 211.0
BYDH2_k127_11113563_2 Prokaryotic dksA/traR C4-type zinc finger - - - 0.000000000000000000000000000001057 125.0
BYDH2_k127_11153388_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 1.975e-226 710.0
BYDH2_k127_11197458_0 phosphoglucomutase phosphomannomutase alpha beta alpha domain I K15778 - 5.4.2.2,5.4.2.8 1.896e-199 630.0
BYDH2_k127_11197458_1 PFAM Peptidase M16 K07263 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001669 408.0
BYDH2_k127_11197458_2 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA K01520 - 3.6.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000005451 240.0
BYDH2_k127_11197458_3 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). - - - 0.00000000000000000000000000000002331 130.0
BYDH2_k127_11210023_0 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962 - 2.1.3.15,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004022 490.0
BYDH2_k127_11210023_1 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003783 293.0
BYDH2_k127_11210023_2 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.0000004719 53.0
BYDH2_k127_11216842_0 NADH-Ubiquinone oxidoreductase (complex I) chain 5 L domain protein K00341 - 1.6.5.3 1.96e-287 895.0
BYDH2_k127_11216842_1 TIGRFAM proton-translocating NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 1.626e-238 745.0
BYDH2_k127_11216842_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006688 613.0
BYDH2_k127_11216842_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003799 535.0
BYDH2_k127_11216842_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001177 287.0
BYDH2_k127_11216842_5 Belongs to the complex I subunit 6 family K00339 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000009995 256.0
BYDH2_k127_11216842_6 NADH-quinone oxidoreductase K00336 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000001447 214.0
BYDH2_k127_11216842_7 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 - 1.6.5.3 0.00000000000000000000000000000000000000003457 153.0
BYDH2_k127_11216842_8 Protein required for attachment to host cells - - - 0.00000000000000000000000000000002432 131.0
BYDH2_k127_11216842_9 Cell division protein DamX K03112 GO:0003674,GO:0005488,GO:0005539,GO:0005575,GO:0005623,GO:0030428,GO:0032153,GO:0042834,GO:0044464,GO:0097367 - 0.000001933 52.0
BYDH2_k127_11233135_0 membrane organization K03641 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008761 301.0
BYDH2_k127_11233135_1 manganese ion binding K04457,K17506 - 3.1.3.16 0.000000003032 63.0
BYDH2_k127_11312591_0 Protein of unknown function (DUF692) K09930 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004699 400.0
BYDH2_k127_11312591_1 Putative DNA-binding domain - - - 0.000000000000000000000000000000000000000000000000001411 194.0
BYDH2_k127_11312591_2 PhoQ Sensor - - - 0.00000000000000000000000000000000000000000004395 174.0
BYDH2_k127_11312591_3 MFS_1 like family - - - 0.00000000000000000000000000000000000000001335 161.0
BYDH2_k127_11312591_4 A domain in the BMP inhibitor chordin and in microbial proteins. - - - 0.00000000000000000000000000000002015 132.0
BYDH2_k127_11312591_5 PFAM DsrE DsrF-like family - - - 0.00000000000000000000000000000007302 127.0
BYDH2_k127_11312591_6 - - - - 0.000000000000000000000000001502 114.0
BYDH2_k127_11312591_7 helix_turn_helix, cAMP Regulatory protein - - - 0.000000000000000000000000001609 121.0
BYDH2_k127_11374620_0 Catalyzes cross-linking of the peptidoglycan cell wall at the division septum K03587 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003551 519.0
BYDH2_k127_11374620_1 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 - 2.1.1.199 0.00000000000000000000000000000000000000000000000000008599 188.0
BYDH2_k127_11374620_2 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic K03586 - - 0.0000000000000000138 87.0
BYDH2_k127_11380901_0 Polysaccharide deacetylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004273 329.0
BYDH2_k127_1143813_0 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 - 4.3.1.19 6.291e-234 732.0
BYDH2_k127_1158278_0 PFAM protein-L-isoaspartate(D-aspartate) O-methyltransferase K00573 - 2.1.1.77 0.000000000000000000000000000000000000000000000000000000000000000002545 242.0
BYDH2_k127_1158278_1 type I secretion outer membrane protein, TolC K12340 - - 0.0000000000000000000000000000000000000000000000007178 183.0
BYDH2_k127_1158278_2 Rhodanese Homology Domain - - - 0.000000000000000000000000000000000000008217 147.0
BYDH2_k127_1158278_3 phosphate-selective porin O and P - - - 0.00002208 49.0
BYDH2_k127_1173003_0 Belongs to the cysteine synthase cystathionine beta- synthase family K12339 - 2.5.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000103 489.0
BYDH2_k127_1173003_1 UTP-glucose-1-phosphate uridylyltransferase K00963 - 2.7.7.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000197 428.0
BYDH2_k127_1173003_2 3'-5' exonuclease related to the exonuclease domain of PolB K07501 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003044 367.0
BYDH2_k127_1173003_3 Lactonase, 7-bladed beta-propeller - - - 0.00000000000000000000000000000000000000000000000000000000000009227 227.0
BYDH2_k127_1173003_4 Thymidine phosphorylase K00758 - 2.4.2.4 0.0000000000000000000000000001369 121.0
BYDH2_k127_1173003_5 Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA K03215 - 2.1.1.190 0.000000000000000001644 86.0
BYDH2_k127_1173003_6 - - - - 0.000000006274 58.0
BYDH2_k127_122080_0 TIGRFAM ribonuclease, Rne Rng family K08301 - - 2.534e-205 649.0
BYDH2_k127_122080_1 Maf-like protein K06287 - - 0.0000000000000000000000000000000000000000000000000000000001357 211.0
BYDH2_k127_122080_2 Membrane - GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0030288,GO:0030313,GO:0031224,GO:0031226,GO:0031975,GO:0042597,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.000000177 58.0
BYDH2_k127_1255425_0 Deoxynucleoside kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002365 278.0
BYDH2_k127_1255425_1 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 GO:0000287,GO:0003674,GO:0003824,GO:0003848,GO:0005488,GO:0016740,GO:0016772,GO:0016778,GO:0043167,GO:0043169,GO:0046872 2.7.6.3 0.0000000000000000000000000000000000000000000000005157 179.0
BYDH2_k127_1255425_2 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.000000000000000000000000000000000000000001375 160.0
BYDH2_k127_1261185_0 Dehydrogenase E1 component K00164 - 1.2.4.2 3.599e-276 861.0
BYDH2_k127_1261185_1 The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) K00658 - 2.3.1.61 0.0000000000000000000000000000000001062 138.0
BYDH2_k127_1273084_0 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) K08307 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0008150,GO:0008932,GO:0008933,GO:0009893,GO:0016020,GO:0016740,GO:0016757,GO:0019222,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043085,GO:0044093,GO:0044464,GO:0048518,GO:0050789,GO:0050790,GO:0051341,GO:0051353,GO:0061783,GO:0065007,GO:0065009 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005656 478.0
BYDH2_k127_1273084_1 Methyltransferase domain - - - 0.0000000000000000000000000000005887 127.0
BYDH2_k127_1310234_0 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000525 467.0
BYDH2_k127_1310234_1 Type II secretion system protein B K02451 - - 0.0000000006067 65.0
BYDH2_k127_1330681_0 6-phosphogluconolactonase activity - - - 0.000000000000000000000000000000000000008097 153.0
BYDH2_k127_1330681_1 - - - - 0.00000000001652 76.0
BYDH2_k127_133531_0 TPR repeat-containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000194 555.0
BYDH2_k127_133531_1 Nucleotidyl transferase K00978 - 2.7.7.33 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003571 451.0
BYDH2_k127_133531_2 GDP-mannose 4,6 dehydratase K01709 - 4.2.1.45 0.000000000000000000000000000000000000009169 147.0
BYDH2_k127_1394630_0 PRMT5 oligomerisation domain K11434 - 2.1.1.319 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002438 321.0
BYDH2_k127_1394630_1 aminopeptidase N K01256 - 3.4.11.2 0.000000000204 63.0
BYDH2_k127_1394630_2 COG0643 Chemotaxis protein histidine kinase and related kinases K02487,K06596 - - 0.0000000002295 64.0
BYDH2_k127_1396533_0 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) K08309 GO:0000270,GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005623,GO:0006022,GO:0006026,GO:0006027,GO:0006807,GO:0008150,GO:0008152,GO:0008932,GO:0008933,GO:0009056,GO:0009057,GO:0009253,GO:0009274,GO:0016740,GO:0016757,GO:0030203,GO:0030288,GO:0030312,GO:0030313,GO:0031975,GO:0042597,GO:0043170,GO:0044464,GO:0061783,GO:0071704,GO:0071944,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002277 443.0
BYDH2_k127_1396533_1 zinc protease protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009957 347.0
BYDH2_k127_1396533_2 NAD-dependent epimerase dehydratase K00329,K00356 - 1.6.5.3,1.6.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008338 321.0
BYDH2_k127_1396533_3 Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. Also shows phosphatase, 2'- nucleotidase and 2',3'-cyclic phosphodiesterase activities. These phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases K00974 - 2.7.7.72 0.000000000000000000000000000000000000000000000000000000004491 202.0
BYDH2_k127_1396533_4 PFAM Aldehyde dehydrogenase K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 0.000000000039 66.0
BYDH2_k127_1407344_0 PHP domain K07053 - 3.1.3.97 0.00000000000000000000000000000000000000000000000000000000000000000000000000000662 269.0
BYDH2_k127_1407344_1 Belongs to the UPF0234 family K09767 - - 0.000000000000000000000000000000000000000000000000000000000003139 215.0
BYDH2_k127_1407344_2 COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases - - - 0.00000000000000000000000000000000000000000000003164 173.0
BYDH2_k127_1407344_3 CBS-domain-containing membrane protein K07168 - - 0.000000000000000000000000000009146 121.0
BYDH2_k127_1407344_4 COG3170 Tfp pilus assembly protein FimV K08086 - - 0.000000000000002593 79.0
BYDH2_k127_1421157_0 Belongs to the 5'-nucleotidase family K11751,K17224 - 3.1.3.5,3.6.1.45 9.275e-236 741.0
BYDH2_k127_1421157_1 Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor K00833 - 2.6.1.62 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002126 333.0
BYDH2_k127_1421157_2 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 0.0000000000000000000000000000000000004785 141.0
BYDH2_k127_1444253_0 ABC transporter transmembrane region K06147 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001363 365.0
BYDH2_k127_1444253_1 Thioredoxin-like - - - 0.000000000000000000000000000000000000000000000000000000000005182 212.0
BYDH2_k127_1444253_2 Nitroreductase family - - - 0.000000000000000000000000000000000000000000000000000000000161 209.0
BYDH2_k127_1444253_3 PFAM Cold-shock protein, DNA-binding K03704 - - 0.000000000000000000000000000008599 122.0
BYDH2_k127_1521853_0 ABC transporter substrate-binding protein PnrA-like K02058 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003778 506.0
BYDH2_k127_1521853_1 Nucleoside-binding outer membrane protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003871 312.0
BYDH2_k127_1521853_2 FCD - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003198 251.0
BYDH2_k127_1521853_3 PFAM Branched-chain amino acid transport system permease component K02057 - - 0.000000000000000000000002957 103.0
BYDH2_k127_1531428_0 cellulase activity K01637,K01652 - 2.2.1.6,4.1.3.1 0.000000000000000000000000000000000000000000005036 185.0
BYDH2_k127_1531428_1 Fibronectin type III domain protein - - - 0.0003521 53.0
BYDH2_k127_1592575_0 FAD linked - - - 0.0 1106.0
BYDH2_k127_1592575_1 histidine kinase HAMP region domain protein K03406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001727 276.0
BYDH2_k127_1592575_2 Part of a sulfur-relay system K11179 - - 0.00000000000000000000000000000000000000000000000000004982 187.0
BYDH2_k127_1610032_0 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004719 515.0
BYDH2_k127_1610032_1 Transcriptional regulatory protein, C terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003717 319.0
BYDH2_k127_1610032_2 cyclic nucleotide-binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003176 280.0
BYDH2_k127_1610032_3 FAD linked - - - 0.000000000000000000000000000000000000000000000000000000000000000000005431 237.0
BYDH2_k127_1610032_4 - - - - 0.0000000000000000000000000000000000000000000000000000000000005425 219.0
BYDH2_k127_1610032_5 Thioredoxin-like - - - 0.000000000000000000000000000000000000000000000000006747 185.0
BYDH2_k127_1610032_6 PKD domain - - - 0.000000000000000000000000000000000000000009158 175.0
BYDH2_k127_1610032_7 Kelch-like family member 4 K10442 GO:0000151,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005815,GO:0005856,GO:0015630,GO:0031461,GO:0031463,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044422,GO:0044424,GO:0044430,GO:0044446,GO:0044464,GO:1902494,GO:1990234 - 0.000000000000000000000000000000000009174 156.0
BYDH2_k127_1610032_8 - - - - 0.000000000000009035 78.0
BYDH2_k127_1641715_0 HDOD domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005415 322.0
BYDH2_k127_1641715_1 - - - - 0.0000000000000000000000000000000000000000000000000000000004433 207.0
BYDH2_k127_1641715_2 Belongs to the glucose-6-phosphate 1-epimerase family K01792 - 5.1.3.15 0.00000000000000000000000000000000000007302 145.0
BYDH2_k127_1672366_0 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004815 383.0
BYDH2_k127_1672366_1 it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins K02314 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000001616 237.0
BYDH2_k127_1672366_2 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 0.0000000000000001253 81.0
BYDH2_k127_1708111_0 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 8.151e-229 731.0
BYDH2_k127_1708111_1 Signal transduction histidine kinase K03407 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001521 522.0
BYDH2_k127_1708111_2 Two component signalling adaptor domain K03408 - - 0.0000000000000000000000000000000000000000000000000000001418 200.0
BYDH2_k127_1744634_0 PFAM Cobyrinic acid a,c-diamide synthase K03496 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003063 296.0
BYDH2_k127_1744634_1 PFAM OmpA MotB domain protein K02557 - - 0.00000000000000000000000000000000000000000003616 168.0
BYDH2_k127_1749381_0 TPR repeat-containing protein - - - 5.244e-242 776.0
BYDH2_k127_1749381_1 TPR repeat-containing protein - - - 2.034e-234 743.0
BYDH2_k127_1759063_0 Belongs to the peptidase S1C family K04691,K04772 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006508,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0009897,GO:0009986,GO:0009987,GO:0010033,GO:0016020,GO:0016021,GO:0016787,GO:0017171,GO:0019538,GO:0030288,GO:0030313,GO:0031224,GO:0031226,GO:0031233,GO:0031975,GO:0033554,GO:0035966,GO:0035967,GO:0042221,GO:0042597,GO:0042802,GO:0043170,GO:0044238,GO:0044425,GO:0044459,GO:0044464,GO:0050896,GO:0051716,GO:0051788,GO:0070011,GO:0070887,GO:0071218,GO:0071310,GO:0071575,GO:0071704,GO:0071944,GO:0098552,GO:0140096,GO:1901564 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001384 408.0
BYDH2_k127_1759063_1 NGG1p interacting factor 3 - - - 0.00000000000000000000000000000000000000000000007124 172.0
BYDH2_k127_1769789_0 GGDEF domain containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001923 525.0
BYDH2_k127_1830555_0 Participates in both transcription termination and antitermination K02600 - - 2.11e-216 681.0
BYDH2_k127_1830555_1 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004432 571.0
BYDH2_k127_1830555_2 Required for maturation of 30S ribosomal subunits K09748 GO:0000028,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000007533 177.0
BYDH2_k127_1830555_3 PFAM SMP-30 Gluconolaconase - - - 0.0000000002027 68.0
BYDH2_k127_1830555_4 domain, Protein - - - 0.00003972 53.0
BYDH2_k127_18380_0 Phosphoribosylformylglycinamidine cyclo-ligase K01933 - 6.3.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004641 473.0
BYDH2_k127_18380_1 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.0000000000000000000000000000000000000000000000000000000000002026 216.0
BYDH2_k127_18380_2 protein conserved in bacteria K09938 - - 0.0000025 55.0
BYDH2_k127_1854381_0 Surface antigen variable number K07278 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001752 481.0
BYDH2_k127_1854381_1 TamB, inner membrane protein subunit of TAM complex K09800 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002834 268.0
BYDH2_k127_1854381_2 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000000000000000000000000000000002392 171.0
BYDH2_k127_1854381_3 Protein of unknown function (DUF2934) - - - 0.00000000007037 64.0
BYDH2_k127_1857536_0 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000008957 229.0
BYDH2_k127_1857536_1 TIGRFAM CRISPR-associated protein - - - 0.000000000000000000000000000000000000000000000000000000000000007646 222.0
BYDH2_k127_1857536_2 Taurine catabolism dioxygenase TauD, TfdA family - - - 0.00000000000000000569 85.0
BYDH2_k127_1857536_3 - - - - 0.000000000005627 69.0
BYDH2_k127_1921567_0 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle K01595 - 4.1.1.31 0.0 1098.0
BYDH2_k127_1921567_1 SNF2 family N-terminal domain - - - 6.119e-283 908.0
BYDH2_k127_1921567_2 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 - 6.3.2.1 0.0000000000000000000000000000000000000000000000000000000000003411 216.0
BYDH2_k127_1921567_3 - - - - 0.0000000000000000000000698 103.0
BYDH2_k127_19277_0 Pirin C-terminal cupin domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000033 375.0
BYDH2_k127_19277_1 N-acetylmuramoyl-L-alanine amidase K01447 - 3.5.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000004002 248.0
BYDH2_k127_19277_2 Diphthamide synthase - - - 0.00000000000000000000000003099 110.0
BYDH2_k127_1934205_0 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 9.66e-202 635.0
BYDH2_k127_1934205_1 ATPase (AAA K07478 - - 0.00000000000000000000000000000000000000000000000000000000008402 206.0
BYDH2_k127_1934205_2 PKHD-type hydroxylase K07336 - - 0.0000000000000000000000000000000000000000000000000003626 189.0
BYDH2_k127_1934205_3 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 - - 0.00000000000000000000000000000000000000004675 156.0
BYDH2_k127_1934205_4 Uncharacterized ACR, COG1993 K09137 - - 0.000000000000000000000000000000005251 133.0
BYDH2_k127_1976408_0 histidine kinase A domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000416 237.0
BYDH2_k127_2019047_0 COG0514 Superfamily II DNA helicase K03654 - 3.6.4.12 1.456e-237 743.0
BYDH2_k127_2019047_1 ABC transporter K15738 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003884 434.0
BYDH2_k127_2019047_2 HDOD domain K01915 - 6.3.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002819 286.0
BYDH2_k127_2022173_0 Pyridine nucleotide-disulphide oxidoreductase K00362,K05297 - 1.18.1.1,1.7.1.15 7.57e-199 625.0
BYDH2_k127_2022173_1 TIGRFAM nitrate ABC transporter, ATPase subunits C and D K15578 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001108 327.0
BYDH2_k127_2037855_0 Diguanylate phosphodiesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000887 375.0
BYDH2_k127_2037855_1 His Kinase A (phospho-acceptor) domain K02484,K07645 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000003522 220.0
BYDH2_k127_2037855_2 Protein of unknown function (DUF1631) - - - 0.0000000000000000000000000000000000016 147.0
BYDH2_k127_2037855_3 Ankyrin repeat - - - 0.0000000000000000004765 93.0
BYDH2_k127_2055770_0 Chase2 domain K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001047 428.0
BYDH2_k127_2055770_1 Bacterial SH3 domain - - - 0.00001302 52.0
BYDH2_k127_2060001_0 Cytochrome C assembly protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004534 273.0
BYDH2_k127_2060001_1 cytochrome c biogenesis protein K07399 - - 0.000000000000000000000000000000000000000000000000000000000000000000002311 251.0
BYDH2_k127_207502_0 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 2.247e-195 616.0
BYDH2_k127_207502_1 Belongs to the GppA Ppx family K01524 - 3.6.1.11,3.6.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011 336.0
BYDH2_k127_2105179_0 Glycosyl transferase 4-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001023 493.0
BYDH2_k127_2105179_1 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006683 454.0
BYDH2_k127_2105179_2 ubiE/COQ5 methyltransferase family - - - 0.00000000000000000000000000000000000000000000000000000008649 205.0
BYDH2_k127_2112685_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K13490 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002542 588.0
BYDH2_k127_2112685_1 diguanylate cyclase K07315,K11444 - 2.7.7.65,3.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009628 366.0
BYDH2_k127_2112685_2 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K13491 - 3.1.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001694 324.0
BYDH2_k127_2117105_0 COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II K01897 - 6.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005027 569.0
BYDH2_k127_2117105_1 Putative transposase - - - 0.0000000009625 63.0
BYDH2_k127_218855_0 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001414 422.0
BYDH2_k127_218855_1 Belongs to the dCTP deaminase family K01494 - 3.5.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002021 359.0
BYDH2_k127_218855_2 Protein of unknown function (DUF3108) - - - 0.000000000000000000000000000000000000000004982 164.0
BYDH2_k127_218855_3 Tetratricopeptide repeat - - - 0.00000000000000001408 90.0
BYDH2_k127_2203680_0 PFAM AMP-dependent synthetase and ligase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007736 330.0
BYDH2_k127_2203680_1 domain, Protein - - - 0.0000000000000000000003225 102.0
BYDH2_k127_2257654_0 Aminotransferase class-V - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009777 430.0
BYDH2_k127_2257654_1 Sensor histidine kinase, PAS, PAS, PAS and PAS domain-containing - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001214 419.0
BYDH2_k127_2276755_0 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source K01916 - 6.3.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003752 440.0
BYDH2_k127_2276755_1 AMP-binding enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003573 245.0
BYDH2_k127_2276755_2 polysaccharide deacetylase - - - 0.000000000000000000000000000000000000000000000000000000000000002188 229.0
BYDH2_k127_2276755_3 transferase activity, transferring acyl groups K03824 - - 0.0000000000000000000000004721 118.0
BYDH2_k127_2276755_4 heat shock protein binding K05801 - - 0.000000000686 66.0
BYDH2_k127_2278505_0 Phosphate transport system permease protein K02038 - - 5.756e-231 726.0
BYDH2_k127_2278505_1 PFAM binding-protein-dependent transport systems inner membrane component K02037 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003608 550.0
BYDH2_k127_2278505_2 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000268 439.0
BYDH2_k127_2278505_3 Plays a role in the regulation of phosphate uptake K02039 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003802 300.0
BYDH2_k127_2295963_0 beta-galactosidase activity K01192 - 3.2.1.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003207 517.0
BYDH2_k127_2302836_0 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001029 611.0
BYDH2_k127_2302836_1 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 - 5.4.99.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007733 352.0
BYDH2_k127_2302836_2 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 0.000000000000000000000000000000000000000000000000000000000000000002779 228.0
BYDH2_k127_2302836_3 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 - - 0.000000000000000000000000000000002619 130.0
BYDH2_k127_2302836_4 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009266,GO:0009409,GO:0009628,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0030490,GO:0033554,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0042274,GO:0043021,GO:0043024,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071840,GO:0090304,GO:1901360 - 0.0000000000000000000000000000006502 126.0
BYDH2_k127_2376908_0 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K07712 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 1.472e-227 712.0
BYDH2_k127_2376908_1 signal transduction histidine kinase K07708 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002156 397.0
BYDH2_k127_2376908_2 ATPase activity, coupled to transmembrane movement of substances - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003597 259.0
BYDH2_k127_2397013_0 Required for chromosome condensation and partitioning K03529 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002455 471.0
BYDH2_k127_2397013_1 Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins K03528 - - 0.0000000000000000000000000000002347 134.0
BYDH2_k127_2397735_0 PFAM aminotransferase class V K00830 - 2.6.1.44,2.6.1.45,2.6.1.51 1.019e-201 634.0
BYDH2_k127_2397735_1 TIGRFAM Arsenical-resistance protein K03325 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003711 336.0
BYDH2_k127_2397735_2 SMART Protein-tyrosine phosphatase, low molecular weight K03741 - 1.20.4.1 0.000000000000000000000000000000000000000000000000000000001047 207.0
BYDH2_k127_2397735_3 helix_turn_helix, Arsenical Resistance Operon Repressor K03892 - - 0.00000000000000000000000000000000000000001383 156.0
BYDH2_k127_2405110_0 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00652 - 2.3.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001176 488.0
BYDH2_k127_2405110_1 Biotin and Thiamin Synthesis associated domain K01012,K16180 - 2.8.1.6,5.4.99.58 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005552 316.0
BYDH2_k127_2405110_2 Competence protein - - - 0.000000000000000000000000000000000000002564 152.0
BYDH2_k127_2405110_3 The physiological role of BioH is to remove the methyl group introduced by BioC when the pimeloyl moiety is complete. It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway through the hydrolysis of the ester bonds of pimeloyl-ACP esters K02170 GO:0003674,GO:0003824,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009987,GO:0016053,GO:0017144,GO:0018130,GO:0019752,GO:0032787,GO:0034641,GO:0042364,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 3.1.1.85 0.00000000000003847 73.0
BYDH2_k127_2411143_0 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006721,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016114,GO:0016491,GO:0016614,GO:0016616,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0030145,GO:0030604,GO:0032787,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046490,GO:0046872,GO:0046914,GO:0048037,GO:0050661,GO:0050662,GO:0051483,GO:0051484,GO:0055114,GO:0070402,GO:0071704,GO:0090407,GO:0097159,GO:1901135,GO:1901265,GO:1901363,GO:1901576 1.1.1.267 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003154 400.0
BYDH2_k127_2411143_1 zinc metalloprotease K11749 - - 0.000000000000000000000000000000000000000000000000000000000004184 213.0
BYDH2_k127_2421883_0 type I secretion outer membrane protein, TolC K12340 - - 0.000000000000000000000000000000000000000000000004636 179.0
BYDH2_k127_2421883_1 Belongs to the peptidase S8 family K14645 - - 0.0000000000000000000001266 107.0
BYDH2_k127_2462538_0 Inositol monophosphatase family K01082 - 3.1.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001264 303.0
BYDH2_k127_2462538_1 PFAM NUDIX hydrolase K08312 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002107 243.0
BYDH2_k127_2462538_2 Belongs to the UPF0061 (SELO) family - - - 0.000000000000000000000000000000000000000000000000177 179.0
BYDH2_k127_2462538_3 Belongs to the bacterial histone-like protein family - - - 0.000000000000000000000000000002963 123.0
BYDH2_k127_2462538_4 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 - 2.3.1.234 0.000000000000000000000682 96.0
BYDH2_k127_2487544_0 Putative S-adenosyl-L-methionine-dependent methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003124 276.0
BYDH2_k127_2487544_1 Belongs to the Glu Leu Phe Val dehydrogenases family K00262 - 1.4.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000001842 265.0
BYDH2_k127_2487544_2 sister chromatid segregation - - - 0.000000000000000000000000000000000000000000000000000000000000000000158 239.0
BYDH2_k127_2487544_3 cellulase activity - - - 0.0000000000000000000000000000000000000000000000000000002066 213.0
BYDH2_k127_2487544_4 cellulase activity - - - 0.000000000000000000000000000000000000000000000001969 190.0
BYDH2_k127_2487544_5 - - - - 0.00005906 52.0
BYDH2_k127_250846_0 Phage derived protein Gp49-like (DUF891) - - - 0.000000000000000000000000000000001251 132.0
BYDH2_k127_250846_1 Transcriptional regulator - - - 0.0000000000000000000000000000006591 127.0
BYDH2_k127_250846_2 PFAM Cupin 2, conserved barrel - - - 0.00000000000000007963 83.0
BYDH2_k127_250846_3 domain protein - - - 0.00007421 56.0
BYDH2_k127_2535015_0 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 - 6.3.4.5 2.162e-229 715.0
BYDH2_k127_2535015_1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation K00382 - 1.8.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001642 490.0
BYDH2_k127_2535015_2 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005648 342.0
BYDH2_k127_2535015_3 Domain of unknown function (DUF1841) - - - 0.0000000000000000000000000000000000000000006265 163.0
BYDH2_k127_2535015_4 Catalyzes the phosphorolysis of diverse nucleosides, yielding D-ribose 1-phosphate and the respective free bases. Can use uridine, adenosine, guanosine, cytidine, thymidine, inosine and xanthosine as substrates. Also catalyzes the reverse reactions K09913 GO:0003674,GO:0003824,GO:0004731,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016154,GO:0016740,GO:0016757,GO:0016763,GO:0044424,GO:0044444,GO:0044464 2.4.2.1,2.4.2.2 0.0000000000000000000000000000005454 128.0
BYDH2_k127_2535015_5 Transcriptional regulator, Crp Fnr family - - - 0.000000000000000000000000004075 116.0
BYDH2_k127_2535015_6 PFAM Ig domain protein group 1 domain protein - - - 0.0000000004135 69.0
BYDH2_k127_2606883_0 Vitamin B12 dependent methionine synthase, activation K00548 - 2.1.1.13 0.0 1804.0
BYDH2_k127_2606883_1 GTP-binding protein TypA K06207 - - 2.139e-301 935.0
BYDH2_k127_2606883_10 - - - - 0.00000000000000000000000002174 116.0
BYDH2_k127_2606883_2 Belongs to the peptidase S33 family K01259 - 3.4.11.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002239 503.0
BYDH2_k127_2606883_3 Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP K01525 - 3.6.1.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001278 344.0
BYDH2_k127_2606883_4 PFAM glutaredoxin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004041 283.0
BYDH2_k127_2606883_5 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 - - 0.000000000000000000000000000000000000000000000000000000000002209 213.0
BYDH2_k127_2606883_6 Universal stress protein family - - - 0.00000000000000000000000000000000000000000000000000116 188.0
BYDH2_k127_2606883_7 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000000000000000000000000000000000000988 171.0
BYDH2_k127_2606883_8 Rhodanese Homology Domain - - - 0.000000000000000000000000000001019 121.0
BYDH2_k127_2606883_9 DsrE/DsrF-like family K09004 - - 0.00000000000000000000000000001601 123.0
BYDH2_k127_2634512_0 S-adenosylmethionine synthetase (AdoMet synthetase) K00789 - 2.5.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002527 313.0
BYDH2_k127_2634512_1 Isochorismatase family K08281 - 3.5.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000003272 249.0
BYDH2_k127_2649008_0 COG1214 Inactive homolog of metal-dependent proteases K14742 GO:0002949,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006508,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0019538,GO:0034470,GO:0034641,GO:0034660,GO:0042802,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070011,GO:0070525,GO:0071704,GO:0090304,GO:0140096,GO:1901360,GO:1901564 - 0.00000000000000000000000000000000000000000000000000000000000000007831 229.0
BYDH2_k127_2649008_1 HELICc2 K03722 - 3.6.4.12 0.00000000000000000000000000000006708 126.0
BYDH2_k127_2649008_2 protein homooligomerization - - - 0.00000000000000000224 99.0
BYDH2_k127_2654493_0 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process K03981 - 5.3.4.1 0.0000000000000000000000000000000000000000000000000000000000000000004036 239.0
BYDH2_k127_2654493_1 A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit contributes ATPase, 3'-5' helicase, exonuclease activity and loads RecA onto ssDNA K03582,K16898 - 3.1.11.5,3.6.4.12 0.00000000000000000000000001227 119.0
BYDH2_k127_2654493_2 Tyrosine recombinase XerD K04763 - - 0.0000000000000000000001407 96.0
BYDH2_k127_2712912_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 0.0 1098.0
BYDH2_k127_2718982_0 Polysaccharide biosynthesis protein - - - 6.183e-196 621.0
BYDH2_k127_2718982_1 Oxidative deamination of D-amino acids K00285 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006082,GO:0006520,GO:0006522,GO:0006524,GO:0006807,GO:0008150,GO:0008152,GO:0008718,GO:0009056,GO:0009063,GO:0009078,GO:0009080,GO:0009987,GO:0016020,GO:0016054,GO:0016491,GO:0016638,GO:0019478,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044464,GO:0046144,GO:0046395,GO:0046416,GO:0046436,GO:0055114,GO:0055130,GO:0071704,GO:0071944,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 1.4.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001948 481.0
BYDH2_k127_2718982_2 Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily K01834 - 5.4.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000006208 248.0
BYDH2_k127_2718982_3 Bacterial-like globin K06886 - - 0.000000000000000000000000000000000000000000000000009866 183.0
BYDH2_k127_2718982_5 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length K04760 - - 0.000000004378 57.0
BYDH2_k127_2726002_0 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007259 312.0
BYDH2_k127_2726002_1 COG1136 ABC-type antimicrobial peptide transport system, ATPase component K02003 - - 0.00000000000000000000000000000000664 128.0
BYDH2_k127_273263_0 Protein of unknown function (DUF3047) - - - 0.0000000000000000000000000000000000000000000000000000000002973 209.0
BYDH2_k127_273263_1 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.0000000000000000000000000000000000000000000000000009414 187.0
BYDH2_k127_2748464_0 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001075 615.0
BYDH2_k127_2748464_1 glycyl-tRNA synthetase, alpha subunit K01878 - 6.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004477 544.0
BYDH2_k127_2748464_2 Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) K00097 GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006081,GO:0006725,GO:0006732,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0008614,GO:0008615,GO:0009058,GO:0009108,GO:0009110,GO:0009987,GO:0016491,GO:0016614,GO:0016616,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0034641,GO:0036094,GO:0042364,GO:0042802,GO:0042816,GO:0042819,GO:0042822,GO:0042823,GO:0043167,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046184,GO:0046483,GO:0046872,GO:0046914,GO:0048037,GO:0050570,GO:0050662,GO:0051186,GO:0051188,GO:0051287,GO:0055114,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:0097159,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 1.1.1.262 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002182 360.0
BYDH2_k127_2748464_3 glycosyl - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001876 364.0
BYDH2_k127_2748464_4 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003518 325.0
BYDH2_k127_2748464_5 COG0790 FOG TPR repeat, SEL1 subfamily - - - 0.00000000000000000000000000000000000000008389 167.0
BYDH2_k127_2762783_0 Bacterial protein of unknown function (DUF883) - - - 0.0000000000000000000000003319 109.0
BYDH2_k127_2762783_1 Late competence development protein ComFB - - - 0.00000000000000000007659 97.0
BYDH2_k127_2762783_2 - - - - 0.000000000006789 70.0
BYDH2_k127_2762783_3 Putative Actinobacterial Holin-X, holin superfamily III - - - 0.00000000002297 71.0
BYDH2_k127_2788919_0 lipolytic protein G-D-S-L family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004759 315.0
BYDH2_k127_2788919_1 acyl-CoA dehydrogenase activity K00249 - 1.3.8.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007911 282.0
BYDH2_k127_2788919_2 Acyltransferase family - - - 0.00000000000000000000000000002698 130.0
BYDH2_k127_2788919_3 acyl carrier protein - - - 0.000000000000000000000282 98.0
BYDH2_k127_2813919_0 Belongs to the ABC transporter superfamily K02031,K02032 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003246 398.0
BYDH2_k127_2813919_1 Flagellar hook protein flgE - - - 0.00000000000000000000000000001032 131.0
BYDH2_k127_2817488_0 Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end K02407 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003165 428.0
BYDH2_k127_2817488_1 Flagellar protein FliS K02422 - - 0.000000000000000000000000000000000008333 139.0
BYDH2_k127_2817488_2 COG0457 FOG TPR repeat - - - 0.00000000005611 63.0
BYDH2_k127_2817488_3 FlaG protein K06603 - - 0.0000000003037 66.0
BYDH2_k127_2817488_4 Flagellar protein FliT K02423 - - 0.000000003258 63.0
BYDH2_k127_2817488_5 Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella K02406 GO:0005575,GO:0005576,GO:0005623,GO:0009288,GO:0042995,GO:0043226,GO:0043228,GO:0044464 - 0.0000323 51.0
BYDH2_k127_2820653_0 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006379 469.0
BYDH2_k127_2820653_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004094 415.0
BYDH2_k127_2820653_2 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001358 311.0
BYDH2_k127_2820653_3 - - - - 0.00000000000975 75.0
BYDH2_k127_2820653_4 Flavin containing amine oxidoreductase K00274 - 1.4.3.4 0.000000003018 58.0
BYDH2_k127_2820968_0 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001067 295.0
BYDH2_k127_2820968_1 Universal stress protein family - - - 0.000000000000000000000000000000001093 137.0
BYDH2_k127_2820968_2 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B K15777 - - 0.000000000000000001822 85.0
BYDH2_k127_2820968_3 Domain of unknown function (DUF3859) - - - 0.0008459 49.0
BYDH2_k127_2848769_0 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002027 384.0
BYDH2_k127_2848769_1 HAD-superfamily hydrolase, subfamily IA, variant 3 K01091 - 3.1.3.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002535 331.0
BYDH2_k127_2848769_2 Copper resistance protein D - - - 0.00000000000000000000000000000000000000000000000000002319 192.0
BYDH2_k127_2848769_3 Protochlamydia outer membrane protein - - - 0.000000000000000000000546 102.0
BYDH2_k127_2865610_0 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.00000000000000000000000000000000000000000000000000000000000000001314 228.0
BYDH2_k127_2865610_1 CHASE4 domain - - - 0.0000000000000000000000000000000000000000000000000000001867 213.0
BYDH2_k127_2865610_2 COG0666 FOG Ankyrin repeat K06867 - - 0.000000000000000000000000000000000000000001762 176.0
BYDH2_k127_2865610_3 FOG TPR repeat, SEL1 subfamily K07126 - - 0.000000000001423 81.0
BYDH2_k127_286938_0 ABC transporter, phosphonate, periplasmic substrate-binding protein K02044 - - 0.0000000000000000000000000000000000000000000000000000000002059 214.0
BYDH2_k127_286938_1 ABC transporter K01996 - - 0.00000000000000000000000000000000000000000008101 161.0
BYDH2_k127_28800_0 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U20 and U20a in tRNAs K05539 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004795 424.0
BYDH2_k127_28800_1 Bifunctional enzyme that catalyzes the enolization of 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P) into the intermediate 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate (HK-MTPenyl-1-P), which is then dephosphorylated to form the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK- MTPene) K09880 - 3.1.3.77 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009135 296.0
BYDH2_k127_28800_2 Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway K08967 - 1.13.11.53,1.13.11.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000001684 263.0
BYDH2_k127_28800_3 Peptidyl-prolyl cis-trans K03772,K03773 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000001092 197.0
BYDH2_k127_28800_4 Molecular chaperone - - - 0.000000000000000000000000000000000000000000001379 174.0
BYDH2_k127_28800_5 Unwinds DNA duplexes with 3' to 5' polarity with respect to the bound strand and initiates unwinding most effectively when a single-stranded region is present K03657 - 3.6.4.12 0.00000000004777 63.0
BYDH2_k127_2893929_0 MotA/TolQ/ExbB proton channel family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001449 254.0
BYDH2_k127_2893929_1 Tetratricopeptide repeat - - - 0.0000000000000000000000000001097 121.0
BYDH2_k127_2893929_2 Biopolymer transport protein ExbD/TolR - - - 0.000000000000000001861 89.0
BYDH2_k127_2893929_3 - - - - 0.000000000000001603 80.0
BYDH2_k127_2931579_0 Galactose-1-phosphate uridyl transferase, N-terminal domain K00965 - 2.7.7.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001232 531.0
BYDH2_k127_2931579_1 Pseudouridine synthase K06177 - 5.4.99.28,5.4.99.29 0.00000000000000000000000000000000000000000000000000000000000000000000006243 248.0
BYDH2_k127_2931579_2 - - - - 0.000000000000000000000000000000000000000000000000000002133 193.0
BYDH2_k127_2931579_3 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000004399 49.0
BYDH2_k127_295374_0 COG4664 TRAP-type mannitol chloroaromatic compound transport system, large permease component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001255 296.0
BYDH2_k127_295374_1 F plasmid transfer operon, TraF, protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001123 311.0
BYDH2_k127_295374_2 TRAP-type mannitol chloroaromatic compound transport system, small permease component - - - 0.00000000000000000000000000000000000000000000000000000000000003446 219.0
BYDH2_k127_2960024_0 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003268 422.0
BYDH2_k127_2960024_1 COG4942 Membrane-bound metallopeptidase - GO:0000920,GO:0001896,GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0008219,GO:0009273,GO:0009314,GO:0009628,GO:0009987,GO:0012501,GO:0016020,GO:0016787,GO:0030288,GO:0030313,GO:0031975,GO:0032153,GO:0042221,GO:0042493,GO:0042546,GO:0042597,GO:0043085,GO:0044085,GO:0044093,GO:0044464,GO:0050790,GO:0050896,GO:0051301,GO:0051336,GO:0051345,GO:0065007,GO:0065009,GO:0071554,GO:0071840,GO:0071944 - 0.0000000000000000000000000000000000001398 152.0
BYDH2_k127_2960024_2 NlpC/P60 family - - - 0.0000000001049 64.0
BYDH2_k127_2970972_0 Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate K08289 - 2.1.2.2 2.977e-196 619.0
BYDH2_k127_2970972_1 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000131 602.0
BYDH2_k127_2970972_2 D-isomer specific 2-hydroxyacid dehydrogenase K00018 - 1.1.1.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002709 397.0
BYDH2_k127_2970972_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000001131 231.0
BYDH2_k127_2970972_4 SNARE associated Golgi protein K03975 - - 0.000000000000000000000001707 106.0
BYDH2_k127_2998055_0 COG1157 Flagellar biosynthesis type III secretory pathway ATPase K02412 GO:0003674,GO:0005488,GO:0005515,GO:0042802 3.6.3.14 8.406e-194 615.0
BYDH2_k127_2998055_1 FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation K02410 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003537 449.0
BYDH2_k127_2998055_2 Flagellar assembly protein FliH K02411 - - 0.000000000000000000000000000000000000000000004357 171.0
BYDH2_k127_2998055_3 Helix-turn-helix XRE-family like proteins K21498 - - 0.00000000000000000000000000000000008451 134.0
BYDH2_k127_2998055_4 RelE-like toxin of type II toxin-antitoxin system HigB K07334 - - 0.00000000000000000000000003246 110.0
BYDH2_k127_2998055_5 lipoprotein releasing system, transmembrane protein, LolC E family K09808 - - 0.000000000000000039 81.0
BYDH2_k127_3043653_0 PFAM Short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002885 357.0
BYDH2_k127_3043653_1 malonyl CoA-acyl carrier protein transacylase K00645 GO:0003674,GO:0003824,GO:0004312,GO:0004314,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016053,GO:0016417,GO:0016419,GO:0016420,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:0072330,GO:1901576 2.3.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000174 282.0
BYDH2_k127_3043653_2 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000248 277.0
BYDH2_k127_3043653_3 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.000000000000000000000000000000001063 131.0
BYDH2_k127_304421_0 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 - 6.5.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002297 595.0
BYDH2_k127_304421_1 prohibitin homologues - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000303 363.0
BYDH2_k127_310010_0 TIGRFAM Tryptophanyl-tRNA synthetase K01867 - 6.1.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003574 382.0
BYDH2_k127_310010_1 Peptidase M50 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003665 293.0
BYDH2_k127_310010_2 Belongs to the SUA5 family - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007227 291.0
BYDH2_k127_310010_3 Sulfatase-modifying factor enzyme 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002106 280.0
BYDH2_k127_310010_4 probably involved in intracellular septation K06190 - - 0.000000000000000000000000000000000000000000000000000000000000000000000006317 247.0
BYDH2_k127_310010_5 YCII-related domain - - - 0.000000000000000000000000000000000000000000145 165.0
BYDH2_k127_310010_6 phosphohistidine phosphatase, SixA - - - 0.000000000000000000000000000000000003712 149.0
BYDH2_k127_310010_7 Belongs to the BolA IbaG family K05527 - - 0.0000000000001161 76.0
BYDH2_k127_3146971_0 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) K03183 GO:0003674,GO:0003824,GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0008150,GO:0008152,GO:0008168,GO:0008169,GO:0008425,GO:0008757,GO:0009058,GO:0009108,GO:0009233,GO:0009234,GO:0009987,GO:0016740,GO:0016741,GO:0030580,GO:0032259,GO:0042180,GO:0042181,GO:0043333,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0051186,GO:0051188,GO:0071704,GO:1901576,GO:1901661,GO:1901663 2.1.1.163,2.1.1.201 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001448 376.0
BYDH2_k127_3146971_1 Protein of unknown function (DUF971) - - - 0.0000000000000000000000000000000000000000000000000000006865 194.0
BYDH2_k127_3146971_2 Sterol-binding domain protein K03690 - - 0.0000000000000000000000000003889 121.0
BYDH2_k127_3154319_0 Fructose-1,6-bisphosphatase K01622 - 3.1.3.11,4.1.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008316 441.0
BYDH2_k127_3154319_1 Belongs to the Nudix hydrolase family. NudJ subfamily - - - 0.000000000000000000000000000000000000000000000888 169.0
BYDH2_k127_3162086_0 Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02400 - - 2.751e-290 905.0
BYDH2_k127_3162086_1 COG1419 Flagellar GTP-binding protein K02404 - - 0.00000000000000000000000000000000000009869 149.0
BYDH2_k127_3162086_2 Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02401 - - 0.000000000000000000000000000003377 122.0
BYDH2_k127_3164743_0 Transcriptional regulatory protein, C terminal K02483 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000222 311.0
BYDH2_k127_3164743_1 Phosphate acyltransferases K00655 - 2.3.1.51 0.00000000000000000000000000000000000000000000004962 173.0
BYDH2_k127_3164743_2 His Kinase A (phospho-acceptor) domain K02484,K07645 - 2.7.13.3 0.00000000000000000000000000000000000003617 150.0
BYDH2_k127_3165616_0 COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 K03148,K21029 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006732,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019538,GO:0019637,GO:0019720,GO:0043170,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0051189,GO:0061605,GO:0070566,GO:0071704,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.7.73,2.7.7.80 0.00000000000000000000000000000000000000000000000000000000000000000000000000008859 262.0
BYDH2_k127_3165616_1 diguanylate cyclase - - - 0.0000000000000000000000000000000001884 150.0
BYDH2_k127_3165616_2 PBP superfamily domain K02040 - - 0.000000000000000000006363 104.0
BYDH2_k127_3198756_0 MMPL family K07003 - - 2.321e-277 874.0
BYDH2_k127_3198756_1 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001093 486.0
BYDH2_k127_3198756_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001225 443.0
BYDH2_k127_3198756_3 Belongs to the UPF0176 family K07146 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003378 355.0
BYDH2_k127_3198756_4 Outer membrane lipoprotein-sorting protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006942 326.0
BYDH2_k127_3198756_5 Putative diguanylate phosphodiesterase - - - 0.000000000000000000000000000000000000000001285 163.0
BYDH2_k127_3198756_6 Phospholipid methyltransferase - - - 0.00000000000000000000000000000002717 131.0
BYDH2_k127_3198756_7 Tetratricopeptide repeat - - - 0.000000000000000000989 89.0
BYDH2_k127_3198756_8 signal transduction protein containing a membrane domain an EAL and a GGDEF domain - - - 0.000000000005245 74.0
BYDH2_k127_3200632_0 PFAM Fatty acid desaturase K00507 - 1.14.19.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001201 497.0
BYDH2_k127_3200632_1 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 - 2.7.7.56 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002046 370.0
BYDH2_k127_3200632_2 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0035870,GO:0036220,GO:0036222,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0046872,GO:0046983,GO:0047429,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 3.6.1.66 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000101 279.0
BYDH2_k127_3200632_3 TIGRFAM DJ-1 family protein K03152 - 3.5.1.124 0.000000000000000000000000000000000000000000000000000000000000000004191 231.0
BYDH2_k127_3200632_4 Belongs to the bacterial ribosomal protein bL28 family K02902 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000003471 147.0
BYDH2_k127_3200632_5 Belongs to the bacterial ribosomal protein bL33 family K02913 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042221,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046677,GO:0050896,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000001049 94.0
BYDH2_k127_3200632_6 YfaZ precursor - - - 0.00000000000000507 84.0
BYDH2_k127_3200632_7 Competence protein - - - 0.00000000002873 65.0
BYDH2_k127_3207546_0 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007068 293.0
BYDH2_k127_3207546_1 Bacterial extracellular solute-binding proteins, family 3 K02030 - - 0.000000000000000000000000000000000000000000007032 175.0
BYDH2_k127_3207546_2 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000003224 129.0
BYDH2_k127_3216784_0 ATPases associated with a variety of cellular activities - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003984 306.0
BYDH2_k127_3216784_1 PFAM lipolytic protein G-D-S-L family K10804 - 3.1.1.5 0.000000000000000000000000000000000000000000000000000000000000000002114 232.0
BYDH2_k127_3216784_2 ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component K02004 - - 0.000000000000000000000000000000000000000000000000000000000000003791 224.0
BYDH2_k127_3216784_3 Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate K01465 - 3.5.2.3 0.00002557 46.0
BYDH2_k127_3250408_0 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component K11959 - - 4.881e-215 673.0
BYDH2_k127_3250408_1 urea ABC transporter, permease protein UrtB K11960 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002497 437.0
BYDH2_k127_3250408_2 Acetamidase/Formamidase family K01455 - 3.5.1.49 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003786 347.0
BYDH2_k127_3251018_0 Elongator protein 3, MiaB family, Radical SAM K06941 GO:0000049,GO:0000154,GO:0001510,GO:0002935,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008169,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016426,GO:0016433,GO:0016740,GO:0016741,GO:0022613,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0051536,GO:0051539,GO:0051540,GO:0070040,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0140098,GO:0140101,GO:0140102,GO:1901360,GO:1901363 2.1.1.192 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002528 372.0
BYDH2_k127_3251018_1 type IV pilus biogenesis stability protein PilW K02656 - - 0.000000000000000000000000000000000000000000001368 178.0
BYDH2_k127_3251018_2 Cytoskeletal protein that is involved in cell-shape control through regulation of the length of the long axis K15539 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0008150,GO:0008360,GO:0016020,GO:0016021,GO:0022603,GO:0022604,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0050789,GO:0050793,GO:0050794,GO:0051128,GO:0065007,GO:0065008,GO:0071944 - 0.00000000000000000002677 100.0
BYDH2_k127_3259296_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 GO:0003674,GO:0003824,GO:0003916,GO:0003917,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006265,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009987,GO:0016043,GO:0016853,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051276,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:1901360 5.99.1.2 0.0 1133.0
BYDH2_k127_3259296_1 PFAM Phosphoribulokinase uridine kinase K00855 - 2.7.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003244 441.0
BYDH2_k127_3259296_2 TIGRFAM DNA protecting protein DprA K04096 - - 0.00000000000000000000000000000000000000000000000000000000000000000003636 237.0
BYDH2_k127_3259296_3 transcriptional regulator, Rrf2 family K13771 - - 0.000000000000000000000000000000000000000003865 159.0
BYDH2_k127_3259296_4 Belongs to the Smg family K03747 - - 0.00000000000000000000000000000000000001032 150.0
BYDH2_k127_3279099_0 Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions K21071 - 2.7.1.11,2.7.1.90 2.275e-235 732.0
BYDH2_k127_3279099_1 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000381 305.0
BYDH2_k127_3279099_2 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions K01507 - 3.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002258 279.0
BYDH2_k127_3279099_3 organic phosphonate transport K02044 - - 0.000000000000000000000000000000000000000000000000000001168 204.0
BYDH2_k127_3279099_4 Belongs to the ALAD family K01698 - 4.2.1.24 0.0000000000000000000000000000000000000000000000000009876 186.0
BYDH2_k127_3279099_5 histidine kinase HAMP region domain protein K03406 - - 0.00000000000000000000000000000000000000000000000001643 195.0
BYDH2_k127_3279099_6 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K06001 - 4.2.1.20 0.0000000000000000000000000000000000000000000007768 169.0
BYDH2_k127_3279099_7 Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin K03636 - - 0.0000000000000000003659 90.0
BYDH2_k127_329466_0 peptidase activity, acting on L-amino acid peptides K01337,K01400,K20276 - 3.4.21.50,3.4.24.28 0.000000000000000000000000000000000000000000000000000000000000005339 235.0
BYDH2_k127_3299847_0 AcrB/AcrD/AcrF family K07787 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000473 591.0
BYDH2_k127_3299847_1 HlyD membrane-fusion protein of T1SS K07798 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008908 347.0
BYDH2_k127_3299847_2 Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000002947 179.0
BYDH2_k127_3326985_0 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 GO:0000271,GO:0003674,GO:0003824,GO:0003844,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0005977,GO:0005978,GO:0006073,GO:0006091,GO:0006112,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009250,GO:0009987,GO:0015980,GO:0016051,GO:0016740,GO:0016757,GO:0016758,GO:0033554,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051716,GO:0055114,GO:0071704,GO:1901576 2.4.1.18 4.201e-298 922.0
BYDH2_k127_3326985_1 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 - 2.4.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005629 546.0
BYDH2_k127_3332397_0 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 3.305e-199 629.0
BYDH2_k127_3332397_1 PFAM Prephenate dehydratase K14170 - 4.2.1.51,5.4.99.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008409 472.0
BYDH2_k127_3332397_2 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005232 427.0
BYDH2_k127_3332397_3 D-isomer specific 2-hydroxyacid dehydrogenase K00058 - 1.1.1.399,1.1.1.95 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007233 423.0
BYDH2_k127_3332397_4 PFAM Prephenate dehydrogenase K04517 - 1.3.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007858 336.0
BYDH2_k127_3332397_5 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 GO:0003674,GO:0003824,GO:0004127,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006573,GO:0006575,GO:0006725,GO:0006732,GO:0006753,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009117,GO:0009123,GO:0009165,GO:0009314,GO:0009628,GO:0009987,GO:0010165,GO:0010212,GO:0015939,GO:0015940,GO:0015949,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0034654,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046939,GO:0046940,GO:0050145,GO:0050896,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.4.25 0.00000000000000000000000000000001681 131.0
BYDH2_k127_3332992_0 dGTPase preferentially hydrolyzes dGTP over the other canonical NTPs K01129 GO:0003674,GO:0003824,GO:0006139,GO:0006163,GO:0006195,GO:0006203,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008832,GO:0009056,GO:0009058,GO:0009117,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009151,GO:0009155,GO:0009166,GO:0009200,GO:0009204,GO:0009215,GO:0009217,GO:0009262,GO:0009264,GO:0009394,GO:0009987,GO:0015949,GO:0016787,GO:0016788,GO:0016793,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042578,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046070,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576 3.1.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001668 500.0
BYDH2_k127_3332992_1 - - - - 0.000000000000004721 77.0
BYDH2_k127_3332992_2 AAA domain - - - 0.00000000001699 73.0
BYDH2_k127_3373303_0 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004925 361.0
BYDH2_k127_3373303_1 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 - 2.4.1.182 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003128 319.0
BYDH2_k127_3373303_2 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.0000000000000000000000000000000000000000000000000000000000000000000000000007725 259.0
BYDH2_k127_3373303_3 DUF218 domain - - - 0.00000000000000000000000000000000000000000000000000000000000001788 227.0
BYDH2_k127_3373303_4 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 - 4.2.1.59 0.00000000000000000000000000000000000000000000000000001236 194.0
BYDH2_k127_3412349_0 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 - 4.1.99.17 0.0 1097.0
BYDH2_k127_3412349_1 ABC-3 protein K02075 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004209 310.0
BYDH2_k127_3412349_5 COG2931, RTX toxins and related Ca2 -binding proteins K20276 - - 0.0000000000002207 79.0
BYDH2_k127_3418514_0 FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation K02416 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001972 464.0
BYDH2_k127_3418514_1 Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.00000000000000000000000000000000000000000000000000000000000946 216.0
BYDH2_k127_3418514_2 FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation K02417 - - 0.000000000000000000000000000000000000000000003008 167.0
BYDH2_k127_3418514_3 Flagellar basal body-associated protein FliL - - - 0.00000000000000000000000002779 118.0
BYDH2_k127_3418514_4 PFAM flagellar biosynthesis protein, FliO K02418 - - 0.000000000000000003138 95.0
BYDH2_k127_3442363_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes K03089 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006946 368.0
BYDH2_k127_3442363_1 C-terminal domain of 1-Cys peroxiredoxin K03386 - 1.11.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001343 307.0
BYDH2_k127_3442363_2 Antibiotic biosynthesis monooxygenase - - - 0.0000000000000000000000000000000000000011 150.0
BYDH2_k127_3442363_3 Bacterial regulatory helix-turn-helix protein, lysR family K04761 - - 0.00000000000000003649 82.0
BYDH2_k127_3442363_4 Iron-containing alcohol dehydrogenase K00001 - 1.1.1.1 0.00000142 52.0
BYDH2_k127_3449833_0 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001115 310.0
BYDH2_k127_3449833_1 Thioredoxin-like - - - 0.0000000000000000000000000000000000000000000008015 170.0
BYDH2_k127_3449833_2 Spondin_N - - - 0.00000000000000000000000000000000001469 145.0
BYDH2_k127_3449833_3 - - - - 0.0001057 49.0
BYDH2_k127_345034_0 Belongs to the GPI family K01810 GO:0003674,GO:0003824,GO:0004347,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0033554,GO:0034404,GO:0034599,GO:0034641,GO:0034654,GO:0034655,GO:0042221,GO:0042802,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0050896,GO:0051186,GO:0051188,GO:0051716,GO:0055086,GO:0070887,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576 5.3.1.9 2.765e-279 867.0
BYDH2_k127_345034_1 thiamine-containing compound biosynthetic process K02051 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008517 281.0
BYDH2_k127_345034_2 DsrE/DsrF-like family - - - 0.00000000000000000000000000000000000000000000000000005653 192.0
BYDH2_k127_345034_3 Probable molybdopterin binding domain - - - 0.00000000000001198 75.0
BYDH2_k127_3467908_0 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03106 - 3.6.5.4 4.879e-207 652.0
BYDH2_k127_3467908_1 DAHP synthetase I family K03856 - 2.5.1.54 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000113 521.0
BYDH2_k127_3467908_2 CBS domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003638 498.0
BYDH2_k127_3467908_3 Carbon-nitrogen hydrolase K12251 - 3.5.1.53 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004805 470.0
BYDH2_k127_3467908_4 Belongs to the agmatine deiminase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002104 466.0
BYDH2_k127_3467908_5 cAMP phosphodiesterases class-II - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001268 293.0
BYDH2_k127_3467908_6 Cytochrome c assembly protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002072 250.0
BYDH2_k127_3467908_7 ABC transporter, phosphonate, periplasmic substrate-binding protein K02044 - - 0.0000000000000002337 84.0
BYDH2_k127_3473716_0 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004635 329.0
BYDH2_k127_3473716_1 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004105 280.0
BYDH2_k127_3473716_2 PFAM MucB RseB K03598 - - 0.00000000000000000000000000000000000000000000000000000000000002134 227.0
BYDH2_k127_3473716_3 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 GO:0000166,GO:0001716,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008734,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0015922,GO:0016491,GO:0016638,GO:0016641,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044318,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046496,GO:0048037,GO:0050660,GO:0050662,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:0097159,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605 1.4.3.16 0.000000000000000000000000000000000000000000000001473 177.0
BYDH2_k127_3473716_4 PFAM Anti sigma-E protein RseA K03597 - - 0.000000000000000000003207 100.0
BYDH2_k127_3521314_0 Heat shock 70 kDa protein K04043 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009438 501.0
BYDH2_k127_3521314_2 DNA polymerase X family K02347 - - 0.0000000000000000000000000000000000000000000000000000000002715 207.0
BYDH2_k127_3529899_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 4.782e-270 839.0
BYDH2_k127_3529899_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 1.085e-257 798.0
BYDH2_k127_3529899_2 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001233 467.0
BYDH2_k127_3529899_3 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004769 403.0
BYDH2_k127_3529899_4 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004427 387.0
BYDH2_k127_3529899_5 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 - - 0.0000000000000000000000000000000000000000000000000000001959 196.0
BYDH2_k127_3529899_6 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.0000000000000000000000000000000000000000000000000006571 188.0
BYDH2_k127_3529899_7 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.000000000000000000000000000000000000000000000001214 180.0
BYDH2_k127_3529899_8 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 - - 0.0000000000000000000000000000000000000000000006906 166.0
BYDH2_k127_3529899_9 ATP synthase I chain K02116 - - 0.000000000001007 73.0
BYDH2_k127_3591098_0 Tellurite resistance protein TehB - - - 0.000000000000000000000000000000000000000000000000000000000001109 228.0
BYDH2_k127_3591098_1 Provides the (R)-glutamate required for cell wall biosynthesis K01776 - 5.1.1.3 0.0000000000000000000000000000000000000000000000009812 178.0
BYDH2_k127_3591098_2 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814 - 2.4.1.129 0.0000000000000000000000000000000000000000000001718 176.0
BYDH2_k127_3591098_3 Polymer-forming cytoskeletal - - - 0.000000212 57.0
BYDH2_k127_3591098_4 PFAM AMP-binding enzyme K01897 - 6.2.1.3 0.00007494 46.0
BYDH2_k127_36095_0 PFAM FAD linked oxidase domain protein K03777 - 1.1.5.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003712 570.0
BYDH2_k127_36095_1 diguanylate cyclase - - - 0.000000000000001428 86.0
BYDH2_k127_36095_2 Protein of unknown function (DUF2835) - - - 0.000000000009222 65.0
BYDH2_k127_36095_3 protein homooligomerization - - - 0.000000274 56.0
BYDH2_k127_3636751_0 it can initiate unwinding at a nick in the DNA. It binds to the single-stranded DNA and acts in a progressive fashion along the DNA in the 3' to 5' direction K03656,K03657 GO:0003674,GO:0003678,GO:0003824,GO:0004003,GO:0004386,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006268,GO:0006725,GO:0006807,GO:0006996,GO:0007049,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009628,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022402,GO:0032392,GO:0032508,GO:0034641,GO:0034645,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044786,GO:0044787,GO:0046483,GO:0050896,GO:0051276,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:1901360,GO:1901576 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002884 419.0
BYDH2_k127_3636751_1 PFAM Formylglycine-generating sulfatase enzyme K18912 - 1.14.99.50 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008375 269.0
BYDH2_k127_3636751_2 PFAM Formylglycine-generating sulfatase enzyme - - - 0.000000000000000000000000000000000000000002672 171.0
BYDH2_k127_367441_0 basal body rod protein K02390 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003693 425.0
BYDH2_k127_367441_1 Belongs to the flagella basal body rod proteins family K02388 - - 0.0000000000000000000000000000000000000000000000000001774 188.0
BYDH2_k127_367441_2 Required for flagellar hook formation. May act as a scaffolding protein K02389 - - 0.00000000000000000000000000000000000000000000000001002 188.0
BYDH2_k127_367441_3 Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body K02387 - - 0.000000000000000000000000000000002579 134.0
BYDH2_k127_367441_4 TIGRFAM flagellar basal-body rod protein FlgF K02391 - - 0.0000000294 56.0
BYDH2_k127_3707472_0 Calcineurin-like phosphoesterase K07098 - - 0.00000000000000000000000000000000000000000000000000000000000000000000003865 248.0
BYDH2_k127_3707472_1 Protein of unknown function (DUF1614) - - - 0.0000000000000000000000000000000000000000000000000000000000000000001389 241.0
BYDH2_k127_3727149_0 Histidine Phosphotransfer domain - - - 0.0000000000000000000000000000000000003777 146.0
BYDH2_k127_3727149_1 - - - - 0.00000000000000000000000001916 108.0
BYDH2_k127_3727149_2 - - - - 0.0000000000000000001464 97.0
BYDH2_k127_3742762_0 diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001521 362.0
BYDH2_k127_3742762_1 ABC transporter, phosphonate, periplasmic substrate-binding protein K02044 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000684 313.0
BYDH2_k127_3742762_2 AAA domain K07028 - - 0.00000000000000000000000000000000000007917 149.0
BYDH2_k127_3742762_3 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000001893 134.0
BYDH2_k127_3785037_0 Type II secretion system K02653 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007476 510.0
BYDH2_k127_3785037_1 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001052 370.0
BYDH2_k127_3785037_2 TIGRFAM type IV-A pilus assembly ATPase PilB K02652 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003979 329.0
BYDH2_k127_3785037_3 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 - 2.7.1.24 0.00000000000000000000000000000000000000000001979 166.0
BYDH2_k127_3785037_4 TIGRFAM type IV-A pilus assembly ATPase PilB K02652 - - 0.00000000000000001449 82.0
BYDH2_k127_378663_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 0.0 1036.0
BYDH2_k127_378663_1 Part of a membrane complex involved in electron transport K03616 - - 0.00000000000000000000000000000000000000000000000000000000000002924 227.0
BYDH2_k127_378663_2 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.0000000000000000000000000000005745 126.0
BYDH2_k127_378663_3 Type II transport protein GspH - - - 0.0003338 46.0
BYDH2_k127_3796911_0 Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine K12960 - 3.5.4.28,3.5.4.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000298 426.0
BYDH2_k127_3796911_1 Nitroreductase family K09019 - - 0.00000000000000000000000000000000000000000000000000000000000000000002111 238.0
BYDH2_k127_3796911_2 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0019509,GO:0019752,GO:0043094,GO:0043102,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046523,GO:0071265,GO:0071267,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.23 0.0000000000000001211 81.0
BYDH2_k127_3802094_0 Isocitrate/isopropylmalate dehydrogenase K00031 - 1.1.1.42 4.401e-241 747.0
BYDH2_k127_3802094_1 Aminotransferase class I and II K00375 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004479 267.0
BYDH2_k127_3802094_2 ChrR Cupin-like domain - - - 0.00000000000000000000000004133 108.0
BYDH2_k127_3848225_0 TIGRFAM Flagellar hook-associated protein, FlgK K02396 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009351 531.0
BYDH2_k127_3848225_1 Belongs to the bacterial flagellin family K02397 - - 0.00000000000000000000000000000000000000000000000000000000000003219 226.0
BYDH2_k127_3848225_2 Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation K02394 - - 0.00000000000000000000000000000000001683 137.0
BYDH2_k127_3848225_3 Flagellar rod assembly protein muramidase FlgJ K02395 - - 0.00000000000000000000005125 102.0
BYDH2_k127_3848225_4 Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella K02406 - - 0.00000000000000003474 83.0
BYDH2_k127_385713_0 sulphate transporter K03321 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004426 581.0
BYDH2_k127_385713_1 PFAM OsmC family protein K06889,K07397 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002116 288.0
BYDH2_k127_385713_2 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000003413 229.0
BYDH2_k127_385713_3 Necessary for the introduction of cis unsaturation into fatty acids. Catalyzes the dehydration of (3R)-3-hydroxydecanoyl- ACP to E-(2)-decenoyl-ACP and then its isomerization to Z-(3)- decenoyl-ACP. Can catalyze the dehydratase reaction for beta- hydroxyacyl-ACPs with saturated chain lengths up to 16 0, being most active on intermediate chain length K01716 - 4.2.1.59,5.3.3.14 0.0000000000000000000000000000000000000000000000000000001486 195.0
BYDH2_k127_385713_4 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.000000000000000000000000000000000000000000000000000002544 193.0
BYDH2_k127_385713_5 SMART Tetratricopeptide - - - 0.00000000001378 71.0
BYDH2_k127_3862494_0 Glycosyltransferase family 92 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005102 246.0
BYDH2_k127_3862494_1 Methyltransferase FkbM family - - - 0.0000000000000000000000000000000004372 141.0
BYDH2_k127_3862494_2 Required for high salt suppression of motility K05811 - - 0.0000001728 54.0
BYDH2_k127_3880289_0 Putative diguanylate phosphodiesterase - - - 5.159e-224 720.0
BYDH2_k127_3880289_1 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004007 302.0
BYDH2_k127_3880289_2 PFAM MoeZ MoeB domain K21029 - 2.7.7.80 0.000000000000007518 74.0
BYDH2_k127_3880289_3 Cytochrome c - - - 0.0000000001754 65.0
BYDH2_k127_3894016_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.0 1220.0
BYDH2_k127_3894016_1 Arabinose 5-phosphate isomerase K06041 - 5.3.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000391 441.0
BYDH2_k127_3894016_10 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.0000000000000000000000006407 107.0
BYDH2_k127_3894016_2 Belongs to the LOG family K06966 - 3.2.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001214 379.0
BYDH2_k127_3894016_3 Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate K03179 - 2.5.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003165 363.0
BYDH2_k127_3894016_4 Endonuclease Exonuclease Phosphatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001573 299.0
BYDH2_k127_3894016_5 Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate K03270 - 3.1.3.45 0.0000000000000000000000000000000000000000000000000000000000000572 216.0
BYDH2_k127_3894016_6 Thiol disulfide interchange protein K03673 - - 0.00000000000000000000000000000000000000000000000000000000006433 211.0
BYDH2_k127_3894016_7 Necessary for normal cell division and for the maintenance of normal septation K03978 - - 0.000000000000000000000000000000000000000000000000000000003322 205.0
BYDH2_k127_3894016_8 Cyclic nucleotide-monophosphate binding domain - - - 0.00000000000000000000000000000000000000000000000000001493 192.0
BYDH2_k127_3894016_9 COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) K04762 - - 0.000000000000000000000000000000006887 131.0
BYDH2_k127_3907365_0 Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties K00688 - 2.4.1.1 0.0 1234.0
BYDH2_k127_3907365_1 Belongs to the UPF0276 family K09930 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001537 401.0
BYDH2_k127_3907365_2 Putative DNA-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000001246 215.0
BYDH2_k127_3907365_3 DsrE/DsrF-like family - - - 0.00000000000000000000000000000000000001146 149.0
BYDH2_k127_3907365_4 Binds RpoD and negatively regulates RpoD-mediated transcription activation by preventing the interaction between the primary sigma factor RpoD with the catalytic core of the RNA polymerase and with promoter DNA. May be involved in replacement of the RNA polymerase sigma subunit from RpoD to RpoS during the transition from exponential growth to the stationary phase K07740 GO:0000988,GO:0000989,GO:0003674,GO:0008150,GO:0009889,GO:0010556,GO:0016989,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0140110,GO:1903506,GO:2001141 - 0.00000000000000000000003668 105.0
BYDH2_k127_3907365_6 Protein of unknown function (DUF3047) - - - 0.000004675 49.0
BYDH2_k127_3907365_7 Sel1-like repeats. - - - 0.00001383 49.0
BYDH2_k127_3944495_0 LysR family K21703 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001677 338.0
BYDH2_k127_3944495_1 - - - - 0.0000000000000000000000000000000000000000000000000000000009295 211.0
BYDH2_k127_3971731_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 - 2.7.7.6 0.0 2213.0
BYDH2_k127_3971731_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 - 2.7.7.6 0.0 2134.0
BYDH2_k127_3971731_10 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation K03073 - - 0.000000000000000000000000007517 114.0
BYDH2_k127_3971731_11 translation elongation factor activity K02358 - - 0.0000000000000000008747 85.0
BYDH2_k127_3971731_12 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000002097 81.0
BYDH2_k127_3971731_13 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation K03073 - - 0.000000002436 59.0
BYDH2_k127_3971731_2 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.0 1142.0
BYDH2_k127_3971731_3 Participates in transcription elongation, termination and antitermination K02601 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009489 309.0
BYDH2_k127_3971731_4 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 GO:0000470,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022625,GO:0022626,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000158 306.0
BYDH2_k127_3971731_5 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002571 248.0
BYDH2_k127_3971731_6 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 - - 0.0000000000000000000000000000000000000000000000000000000000000000005208 229.0
BYDH2_k127_3971731_7 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 - - 0.000000000000000000000000000000000000000000000000000000000000000007632 228.0
BYDH2_k127_3971731_8 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 - - 0.0000000000000000000000000000000000000000000000000000000000000549 217.0
BYDH2_k127_3971731_9 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.00000000000000000000000000000000000000000001011 165.0
BYDH2_k127_3989309_0 Signal transduction protein - - - 0.0000000000000000000000000000000000000000000000001565 188.0
BYDH2_k127_3989309_1 M42 glutamyl aminopeptidase - - - 0.000000000000000000000000000000007066 142.0
BYDH2_k127_3989309_2 Oxygen tolerance - - - 0.0000004342 58.0
BYDH2_k127_3990067_0 von Willebrand factor, type A K07114 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003037 500.0
BYDH2_k127_3997218_0 response regulator K20977 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001125 492.0
BYDH2_k127_3997218_1 PFAM Phospholipid glycerol acyltransferase K00655 - 2.3.1.51 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001281 309.0
BYDH2_k127_3997218_2 COG0241 Histidinol phosphatase and related phosphatases K03273 - 3.1.3.82,3.1.3.83 0.0000000000000000000000000000000000000000000000000000000000000000001339 239.0
BYDH2_k127_3997218_3 PFAM Eukaryotic-type carbonic anhydrase K01674 - 4.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000002503 234.0
BYDH2_k127_3997218_4 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.000000000000000000000000000000000000000000000000006749 196.0
BYDH2_k127_3997218_5 Glycyl-tRNA synthetase beta subunit K01879 GO:0003674,GO:0003824,GO:0004812,GO:0004820,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006426,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.14 0.000000000000000000000000000000000000000008061 157.0
BYDH2_k127_3997218_6 PFAM RNP-1 like RNA-binding protein - - - 0.00000000000000000000000000009454 117.0
BYDH2_k127_3997218_7 Anti-anti-sigma regulatory factor (Antagonist of anti-sigma factor) K20978 - - 0.000000000000000000003019 96.0
BYDH2_k127_3997218_8 Domain of unknown function (DUF3330) - - - 0.0000000000001196 72.0
BYDH2_k127_4018007_0 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004809 391.0
BYDH2_k127_4018007_1 Domain of unknown function (DUF4124) - - - 0.0000001249 61.0
BYDH2_k127_4018481_0 Belongs to the acetyltransferase family. ArgA subfamily K14682 - 2.3.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005974 550.0
BYDH2_k127_4018481_1 Periplasmic component of the Tol biopolymer transport system - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005914 422.0
BYDH2_k127_4018481_2 COG0303 Molybdopterin biosynthesis enzyme K03750 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006464,GO:0006725,GO:0006732,GO:0006753,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009144,GO:0009150,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0018315,GO:0019538,GO:0019637,GO:0019693,GO:0019720,GO:0032324,GO:0034641,GO:0036211,GO:0042040,GO:0042278,GO:0042802,GO:0043170,GO:0043412,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046039,GO:0046128,GO:0046483,GO:0051186,GO:0051188,GO:0051189,GO:0055086,GO:0061598,GO:0061599,GO:0070566,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657 2.10.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002111 286.0
BYDH2_k127_4018481_3 Protochlamydia outer membrane protein - - - 0.00000000000000003398 88.0
BYDH2_k127_4070311_0 Uncharacterized alpha/beta hydrolase domain (DUF2235) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001013 429.0
BYDH2_k127_4070311_1 Mitochondrial biogenesis AIM24 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001309 393.0
BYDH2_k127_4070311_2 COG1404 Subtilisin-like serine proteases K14645 - - 0.0000000000000000000000000000000000000000000000000000000000000000000003992 249.0
BYDH2_k127_4070311_3 methyltransferase (Contains TPR repeat) - - - 0.0000000000000000000000000001331 121.0
BYDH2_k127_4070311_4 - - - - 0.0000000001172 68.0
BYDH2_k127_4070311_5 Protein of unknown function (DUF2892) - - - 0.0001744 49.0
BYDH2_k127_4076024_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0 1380.0
BYDH2_k127_4076024_1 Sulfite exporter TauE/SafE K07090 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002656 328.0
BYDH2_k127_4076024_2 Transcriptional regulatory protein, C terminal K02483 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003814 310.0
BYDH2_k127_4076024_3 His Kinase A (phospho-acceptor) domain K02484,K07645 - 2.7.13.3 0.0000000000000000000000000000000000000000001309 169.0
BYDH2_k127_4076024_4 Belongs to the 'phage' integrase family K04763 - - 0.00000000000000000000000000000000000001009 146.0
BYDH2_k127_4076024_5 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075,K15780 - 2.4.2.8,6.3.4.19 0.00000000000000004411 89.0
BYDH2_k127_4076024_6 - - - - 0.00000000000004106 78.0
BYDH2_k127_4084933_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00283 - 1.4.4.2 2.137e-242 754.0
BYDH2_k127_4084933_1 PFAM pfkB family carbohydrate kinase K00856 - 2.7.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008179 499.0
BYDH2_k127_4084933_2 TIGRFAM alkylphosphonate utilization operon protein PhnA K06193 - - 0.0000000000000000000000000000000000000000000000000000001465 196.0
BYDH2_k127_4084933_3 Recycling of diacylglycerol produced during the turnover of membrane phospholipid K00901 - 2.7.1.107 0.000000000000000000000000000000000000000005371 157.0
BYDH2_k127_4084933_4 Catalyzes the ATP-dependent phosphorylation of the 3- deoxy-D-manno-octulosonic acid (Kdo) residue in Kdo-lipid IV(A) at the 4-OH position K11211 - 2.7.1.166 0.000000000000000000000000000004016 123.0
BYDH2_k127_4086134_0 COG2217 Cation transport ATPase K17686 - 3.6.3.54 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001078 572.0
BYDH2_k127_4088880_0 COG0500 SAM-dependent methyltransferases K00563 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005488,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008270,GO:0008649,GO:0008757,GO:0008989,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0046872,GO:0046914,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.187 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002376 314.0
BYDH2_k127_4088880_1 Protein of unknown function (DUF1439) - - - 0.00000000000000009622 89.0
BYDH2_k127_4088880_2 AAA-type ATPase, and DNA-binding domains - - - 0.000000000000001327 79.0
BYDH2_k127_4098376_0 Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily K17828 - 1.3.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006342 520.0
BYDH2_k127_4098376_1 Glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001852 366.0
BYDH2_k127_4098376_2 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001256 382.0
BYDH2_k127_4098376_3 Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide K03216 GO:0001510,GO:0002128,GO:0002130,GO:0002131,GO:0002132,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016300,GO:0016427,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042802,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0052665,GO:0052666,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.207 0.00000000000000000000000000000000000000000000000000000000000000005087 226.0
BYDH2_k127_4098376_4 One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA K03071 - - 0.00000000000000000000000000000000000000000000000000000000000652 211.0
BYDH2_k127_4098376_5 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 0.0000000000000000000000000000000000000000000000000000000001002 206.0
BYDH2_k127_4098376_6 Thioredoxin K03672 - 1.8.1.8 0.0000000000000000000000000000000000000000000000000000000006464 205.0
BYDH2_k127_4098376_7 regulatory protein, arsR - - - 0.00000000000000000000000000000000000000000000001597 175.0
BYDH2_k127_4098376_8 PFAM Rhodanese-like - - - 0.00000000000000000000000000000000001487 139.0
BYDH2_k127_4098376_9 Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins K03676 - - 0.0000000000000000000009963 100.0
BYDH2_k127_4102281_0 PFAM Metal-dependent hydrolase HDOD - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008601 274.0
BYDH2_k127_4102281_1 Protein of unknown function (DUF1749) - - - 0.000000000000000000000000000000000000000000000000000000000000000002096 236.0
BYDH2_k127_4102281_2 Putative diguanylate phosphodiesterase - - - 0.000000000000000000000000000000000000000000000001969 194.0
BYDH2_k127_4106195_0 Involved in peptide bond synthesis. Alleviates ribosome stalling that occurs when 3 or more consecutive Pro residues or the sequence PPG is present in a protein, possibly by augmenting the peptidyl transferase activity of the ribosome. Modification of K02356 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006414,GO:0006417,GO:0006448,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0017148,GO:0019222,GO:0019538,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0034248,GO:0034249,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0045900,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0071704,GO:0072344,GO:0080090,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:2000112,GO:2000113,GO:2001124,GO:2001125 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001401 302.0
BYDH2_k127_4106195_1 COG2269 Truncated, possibly inactive, lysyl-tRNA synthetase (class II) K04568 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006430,GO:0006464,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016746,GO:0016755,GO:0018193,GO:0018205,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0036211,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0052868,GO:0071704,GO:0071915,GO:0072580,GO:0072581,GO:0090304,GO:0140096,GO:1901360,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002437 294.0
BYDH2_k127_4106195_2 TIGRFAM lysine 2,3-aminomutase YodO family protein K01843,K19810 - 5.4.3.2 0.00000000000005958 74.0
BYDH2_k127_4111984_0 MazG nucleotide pyrophosphohydrolase domain K04765 - 3.6.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001432 304.0
BYDH2_k127_4111984_1 signal transduction protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000005455 251.0
BYDH2_k127_4111984_2 HDOD domain - - - 0.00000000000000000000000000000000000000000000000000000000000258 220.0
BYDH2_k127_4111984_3 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0008728,GO:0008893,GO:0009116,GO:0009117,GO:0009119,GO:0009150,GO:0009259,GO:0009605,GO:0009987,GO:0009991,GO:0015949,GO:0015969,GO:0016020,GO:0016740,GO:0016772,GO:0016778,GO:0016787,GO:0016788,GO:0016794,GO:0019637,GO:0019693,GO:0030312,GO:0031667,GO:0033865,GO:0033875,GO:0034032,GO:0034035,GO:0034641,GO:0042278,GO:0042578,GO:0042594,GO:0044237,GO:0044238,GO:0044281,GO:0044464,GO:0046128,GO:0046483,GO:0050896,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:1901068,GO:1901135,GO:1901360,GO:1901564,GO:1901657 2.7.6.5 0.00000000000000000000000000000000000000000008399 164.0
BYDH2_k127_4111984_4 Forkhead associated domain - - - 0.00000000000000112 80.0
BYDH2_k127_4111984_5 Transcriptional regulatory protein, C terminal - - - 0.00000001263 64.0
BYDH2_k127_4111984_6 Outer membrane protein beta-barrel domain - - - 0.0000005681 59.0
BYDH2_k127_4126949_0 PFAM Type II secretion system protein E K02670 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001969 528.0
BYDH2_k127_4126949_1 - K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000001049 230.0
BYDH2_k127_4126949_2 Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell K00982 - 2.7.7.42,2.7.7.89 0.0000139 52.0
BYDH2_k127_4143260_0 ROK family K00845,K00847,K00884 - 2.7.1.2,2.7.1.4,2.7.1.59 0.000000000000000000000000000000000000000000000000000000006667 201.0
BYDH2_k127_4143260_1 YD repeat (two copies) - - - 0.0003391 54.0
BYDH2_k127_4255043_0 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001604 415.0
BYDH2_k127_4255043_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001521 284.0
BYDH2_k127_4256992_0 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000004308 192.0
BYDH2_k127_4256992_1 - - - - 0.0000000000000000000000000007955 123.0
BYDH2_k127_4256992_2 von Willebrand factor (vWF) type A domain K02448 - - 0.000001347 53.0
BYDH2_k127_4256992_3 - - - - 0.000001792 50.0
BYDH2_k127_4262168_0 FAD dependent oxidoreductase K06954 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001318 578.0
BYDH2_k127_4262168_1 PFAM Cyclopropane-fatty-acyl-phospholipid synthase K00574 - 2.1.1.79 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004488 514.0
BYDH2_k127_4262168_2 Protein of unknown function (DUF1365) K09701 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002851 308.0
BYDH2_k127_4262168_3 Outer Membrane Lipoprotein K03098 - - 0.0000000000000000000000000000000000000000000000000000000000000000000006297 244.0
BYDH2_k127_4262168_4 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000001192 181.0
BYDH2_k127_4262168_5 3-oxo-5-alpha-steroid 4-dehydrogenase - - - 0.0000000000000000000000000000000000000001651 151.0
BYDH2_k127_4262168_6 Domain of unknown function DUF302 - - - 0.0000000000000000000000000000001655 128.0
BYDH2_k127_4263013_0 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006936 392.0
BYDH2_k127_4263013_1 phosphoserine phosphatase K01079 - 3.1.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008683 301.0
BYDH2_k127_4379275_0 serine threonine protein kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000004069 243.0
BYDH2_k127_4379275_1 cell redox homeostasis K03671 - - 0.0000000000000000000002375 103.0
BYDH2_k127_4379275_2 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction K00925 - 2.7.2.1 0.000000000000000000002541 97.0
BYDH2_k127_4380319_0 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 - - 1.624e-275 856.0
BYDH2_k127_4380319_1 Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane K19804 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001775 369.0
BYDH2_k127_4380319_2 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 - 4.1.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001404 291.0
BYDH2_k127_4380319_3 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K05788 - - 0.0000000000000000000000000000000000000000001498 161.0
BYDH2_k127_4380319_4 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 GO:0003674,GO:0003824,GO:0004127,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006573,GO:0006575,GO:0006725,GO:0006732,GO:0006753,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0034654,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046939,GO:0046940,GO:0050145,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.4.25 0.000000000000000000000000000000000000000007564 156.0
BYDH2_k127_4396571_0 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001543 437.0
BYDH2_k127_4396571_1 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002236 371.0
BYDH2_k127_4396571_2 Redoxin K03564 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000000000000008816 231.0
BYDH2_k127_4396571_3 Uncharacterized protein family, UPF0114 - - - 0.000000000000000000000000000000000000000000000000000000000000000002583 232.0
BYDH2_k127_4396571_4 PFAM Amino acid-binding ACT K03567 - - 0.00000000000000000000000000000000000000000000000000000000000000001727 228.0
BYDH2_k127_4396571_5 - - - - 0.0000000000000000000000116 108.0
BYDH2_k127_4396571_6 Alpha beta hydrolase - - - 0.000000000000000002628 90.0
BYDH2_k127_4399571_0 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001203 449.0
BYDH2_k127_4399571_1 Chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HscB K04044 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006807,GO:0006950,GO:0008144,GO:0008150,GO:0008152,GO:0009266,GO:0009409,GO:0009628,GO:0009987,GO:0010467,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033554,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043531,GO:0044238,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0050896,GO:0051604,GO:0051716,GO:0070417,GO:0071704,GO:0097159,GO:0097367,GO:0097428,GO:1901265,GO:1901363,GO:1901564,GO:1902494,GO:1990230,GO:1990234 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009613 451.0
BYDH2_k127_4399571_2 Is able to transfer iron-sulfur clusters to apo- ferredoxin. Multiple cycles of 2Fe2S cluster formation and transfer are observed, suggesting that IscA acts catalytically. Recruits intracellular free iron so as to provide iron for the assembly of transient iron-sulfur cluster in IscU in the presence of IscS, L-cysteine and the thioredoxin reductase system K13628 - - 0.0000000000000000000000000000000000000000000000005576 177.0
BYDH2_k127_4399571_3 Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA K04082 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0019538,GO:0032991,GO:0043170,GO:0044238,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051604,GO:0071704,GO:0097428,GO:1901564,GO:1902494,GO:1990230,GO:1990234 - 0.0000000000000000000000000000000002714 139.0
BYDH2_k127_4422279_0 Reutilizes the intact tripeptide L-alanyl-gamma-D- glutamyl-meso-diaminopimelate by linking it to UDP-N- acetylmuramate K02558 - 6.3.2.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007433 490.0
BYDH2_k127_4422279_1 PFAM Glyoxalase bleomycin resistance protein dioxygenase K07032 - - 0.0000000000000000000000000000000000000000000000000000000000000000000009445 238.0
BYDH2_k127_4422279_2 ATP-dependent protease La (LON) substrate-binding domain K07157 - - 0.000000000000000000000000000000000000000000000000000000000006682 213.0
BYDH2_k127_4422279_3 SNARE associated Golgi protein - - - 0.000000000000000000000009554 107.0
BYDH2_k127_4458612_0 Phage late control gene D protein (GPD) K11904 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001979 585.0
BYDH2_k127_4461758_0 Belongs to the ATCase OTCase family K00609 - 2.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002449 490.0
BYDH2_k127_4461758_1 TIGRFAM dihydroorotase, multifunctional complex type K01465 - 3.5.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001757 305.0
BYDH2_k127_4461758_2 Belongs to the UPF0301 (AlgH) family K07735 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000000000006677 256.0
BYDH2_k127_4461758_3 phosphoribosyltransferase K02825 - 2.4.2.9 0.000000000000000000000000000000000000000000000000000000000000000001383 231.0
BYDH2_k127_4461758_4 Periplasmic protein TonB links inner and outer membranes K03832 - - 0.0000000000000000000000000000000000000000004645 165.0
BYDH2_k127_4461758_5 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 - - 0.00000000000000000000000000000000000002947 147.0
BYDH2_k127_4462844_0 PFAM YaeQ - - - 0.000000000000000000000000000000000000000000000000000000000000000001794 236.0
BYDH2_k127_4462844_1 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000144 193.0
BYDH2_k127_4462844_3 Domain of unknown function (DUF5062) - - - 0.0000000000000000000000000000000003299 136.0
BYDH2_k127_4462844_4 Domain of unknown function (DUF4389) - - - 0.0000000000000000000000003319 109.0
BYDH2_k127_4462844_5 RNA-binding K14761 - - 0.000000000000000000003498 94.0
BYDH2_k127_4462844_6 Cysteine-rich CPXCG - - - 0.0000000000000003263 85.0
BYDH2_k127_4462844_7 Responsible for synthesis of pseudouridine from uracil K06180 GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022613,GO:0031118,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 5.4.99.23 0.0000004119 54.0
BYDH2_k127_4462844_8 peptidase - - - 0.000002458 54.0
BYDH2_k127_4510678_0 double-strand break repair protein AddB K16899 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009287 404.0
BYDH2_k127_4510678_1 A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit contributes ATPase, 3'-5' helicase, exonuclease activity and loads RecA onto ssDNA K03582,K16898 - 3.1.11.5,3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004483 394.0
BYDH2_k127_4511068_0 Belongs to the ABC transporter superfamily K02010 - 3.6.3.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008723 273.0
BYDH2_k127_4511068_1 diguanylate cyclase - - - 0.0000000000000000000000000000000000000000004514 174.0
BYDH2_k127_4546428_0 chemotaxis protein K02660 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000707 559.0
BYDH2_k127_4546428_1 Signal transducing histidine kinase, homodimeric domain K02487,K06596 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004207 417.0
BYDH2_k127_4546428_2 COG1352 Methylase of chemotaxis methyl-accepting proteins K00575,K02661 - 2.1.1.80 0.000000000000000000000000000000000000000000000004823 183.0
BYDH2_k127_4547739_0 DEAD-box RNA helicase involved in ribosome assembly. Has RNA-dependent ATPase activity and unwinds double-stranded RNA K11927 GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006807,GO:0006950,GO:0006996,GO:0008026,GO:0008150,GO:0008152,GO:0008186,GO:0009266,GO:0009408,GO:0009628,GO:0009987,GO:0010501,GO:0016043,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0034641,GO:0042254,GO:0042255,GO:0042623,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0065003,GO:0070035,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0140098,GO:1901360 3.6.4.13 9.143e-194 613.0
BYDH2_k127_4547739_1 PFAM aldo keto reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001289 330.0
BYDH2_k127_4547739_2 Belongs to the UPF0225 family K09858 - - 0.0000000000000000000000000000000000000000001735 161.0
BYDH2_k127_4547739_3 PFAM Cold-shock protein, DNA-binding K03704 - - 0.00000000000000000000000000000147 121.0
BYDH2_k127_4563255_0 nuclease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002247 338.0
BYDH2_k127_4563255_1 surface antigen variable number repeat protein K07001 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006269 299.0
BYDH2_k127_4569495_0 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 7.869e-223 696.0
BYDH2_k127_4569495_1 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001823 438.0
BYDH2_k127_4569495_2 COG0835 Chemotaxis signal transduction protein K03415 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007529 378.0
BYDH2_k127_4569495_3 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.00000000000000000000000000000000000000000000000000000000000000000000000001582 254.0
BYDH2_k127_4569495_4 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.000000000000000000000000000000000000000000000000000000000000003675 221.0
BYDH2_k127_4597606_0 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008987,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016053,GO:0017144,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0019805,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046496,GO:0046874,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.5.1.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006642 473.0
BYDH2_k127_4597606_1 Mortierella verticillata NRRL 6337 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001786 312.0
BYDH2_k127_4608808_0 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005246 328.0
BYDH2_k127_4608808_1 Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP K01496 - 3.5.4.19 0.0000000000000000000000000000000000000000000000000000000025 203.0
BYDH2_k127_4608808_2 PFAM Phosphoribosyl-ATP pyrophosphohydrolase K01523 GO:0000105,GO:0003674,GO:0003824,GO:0004636,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 3.6.1.31 0.000000000000000000000000000000000000000000001328 166.0
BYDH2_k127_4608808_3 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 GO:0000107,GO:0003674,GO:0003824,GO:0016740,GO:0016757,GO:0016763 - 0.00000000000000000000000000000002191 126.0
BYDH2_k127_4608808_4 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation K03117 GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009977,GO:0015031,GO:0015291,GO:0015399,GO:0015405,GO:0015450,GO:0015833,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0022884,GO:0031224,GO:0031226,GO:0032991,GO:0033036,GO:0033281,GO:0034613,GO:0042802,GO:0042886,GO:0042887,GO:0043953,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0046907,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0065002,GO:0070727,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0098796,GO:0098797,GO:1904680 - 0.00000000000000000004591 95.0
BYDH2_k127_4608808_5 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 GO:0002790,GO:0003674,GO:0005215,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008565,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0032940,GO:0033036,GO:0034613,GO:0042886,GO:0045184,GO:0046903,GO:0046907,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0070727,GO:0071702,GO:0071705 - 0.00000000000000000008195 91.0
BYDH2_k127_4654141_0 Polysaccharide chain length determinant protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001017 504.0
BYDH2_k127_4654141_1 Capsular exopolysaccharide family K08252,K16692 - 2.7.10.1 0.00001184 51.0
BYDH2_k127_4661716_0 Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate K01952 GO:0000166,GO:0003674,GO:0003824,GO:0004642,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006520,GO:0006541,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009064,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016874,GO:0016879,GO:0016884,GO:0016887,GO:0017076,GO:0017111,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605 6.3.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001637 392.0
BYDH2_k127_4661716_1 PFAM Pentapeptide - - - 0.0000000000000000000000000000000000000031 155.0
BYDH2_k127_4696117_0 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001423 494.0
BYDH2_k127_4696117_1 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006206 350.0
BYDH2_k127_4696117_2 High frequency lysogenization protein HflD homolog K07153 - - 0.0000000000000000000000000000000000000000000000000000001278 201.0
BYDH2_k127_4696117_3 mitochondrial tRNA thio-modification K21027 - 2.8.1.14 0.000000000000000000000309 100.0
BYDH2_k127_4733964_0 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen K00990 - 2.7.7.59 0.0 1027.0
BYDH2_k127_4733964_1 TIGRFAM methionine aminopeptidase, type I K01265 - 3.4.11.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006092 426.0
BYDH2_k127_4733964_2 Belongs to the universal ribosomal protein uS2 family K02967 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004846 353.0
BYDH2_k127_4733964_3 Bacterial regulatory helix-turn-helix protein, lysR family K13634 - - 0.00000000000000006875 82.0
BYDH2_k127_4756992_0 Belongs to the aconitase IPM isomerase family K01682 - 4.2.1.3,4.2.1.99 0.0 1328.0
BYDH2_k127_4788393_0 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003533 306.0
BYDH2_k127_4788393_1 PFAM PKD domain containing protein - - - 0.00000000000000000000000000005503 130.0
BYDH2_k127_4803501_0 PPIC-type PPIASE domain K03769 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000005853 197.0
BYDH2_k127_4803501_1 Phosphate-starvation-inducible E - - - 0.00000000000000000000000000000003703 132.0
BYDH2_k127_4803501_2 Belongs to the BolA IbaG family K05527 - - 0.0000000000000000000000003544 106.0
BYDH2_k127_4803501_3 Integrase core domain - - - 0.0000000000000000000003301 98.0
BYDH2_k127_4816108_0 Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs K08300 - 3.1.26.12 1.545e-229 724.0
BYDH2_k127_4816108_1 Responsible for synthesis of pseudouridine from uracil K06179 - 5.4.99.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006032 347.0
BYDH2_k127_4816108_2 subfamily IA, variant 1 K01091 - 3.1.3.18 0.000000000000000000000000000000000000000000000000000000000000000000000000003656 258.0
BYDH2_k127_4827834_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001355 419.0
BYDH2_k127_4827834_1 PFAM Short-chain dehydrogenase reductase SDR K03793 - 1.5.1.33 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000336 312.0
BYDH2_k127_4827834_2 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.000000000000000000000000000000008603 138.0
BYDH2_k127_4827834_3 PFAM sigma-54 factor interaction domain-containing protein K02584,K07713 - - 0.0000000000000000000000000004002 122.0
BYDH2_k127_483473_0 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004307 304.0
BYDH2_k127_483473_1 Ig-like domain from next to BRCA1 gene - - - 0.0000000000000000000000000000000000000000000006018 182.0
BYDH2_k127_483473_2 rhs family - - - 0.0000000005781 71.0
BYDH2_k127_4837165_0 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009536 432.0
BYDH2_k127_4848425_0 Protein of unknown function (DUF1343) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000604 548.0
BYDH2_k127_4848425_1 PilZ domain K02676 - - 0.000000000000000000000000000000000000000000000000000006191 191.0
BYDH2_k127_4848425_2 TIGRFAM ATPase, P-type, K Mg Cd Cu Zn Na Ca Na H-transporter K01539 - 3.6.3.9 0.000000000000000000000000000000000000000001387 159.0
BYDH2_k127_4848425_3 - - - - 0.0000000000000000000000000000000000006795 147.0
BYDH2_k127_4848425_4 DNA polymerase III, delta' K02341 - 2.7.7.7 0.0000000000001341 75.0
BYDH2_k127_4881324_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005371 322.0
BYDH2_k127_4881324_1 uracil-DNA glycosylase K21929 - 3.2.2.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005819 284.0
BYDH2_k127_4893215_0 Prokaryotic cytochrome b561 - - - 0.0000000000000000000000000000000000000000000000000000000000000000003053 235.0
BYDH2_k127_4893215_1 PFAM Formylglycine-generating sulfatase enzyme - - - 0.00000000000000000000000000000000000000000000000000007559 197.0
BYDH2_k127_4893215_2 - - - - 0.000000000000000000000000000225 119.0
BYDH2_k127_4893215_3 Belongs to the SlyX family K03745 - - 0.000002064 51.0
BYDH2_k127_4931587_0 PFAM Metal-dependent phosphohydrolase, HD K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001206 477.0
BYDH2_k127_4931587_1 ABC transporter, phosphonate, periplasmic substrate-binding protein K02044 - - 0.0000000000000000000000000000000000000000000000000000000000000000006727 239.0
BYDH2_k127_4931587_2 Domain of unknown function (DUF4382) - - - 0.000000000000000000000000000000000000000000000000000005197 201.0
BYDH2_k127_4931587_3 Glutathione S-transferase, N-terminal domain K00799 - 2.5.1.18 0.00000000000000000000000000000000000000000000007815 178.0
BYDH2_k127_4931587_4 Polyketide cyclase / dehydrase and lipid transport - - - 0.000000000000000000000000000000000000000000002484 176.0
BYDH2_k127_4931587_5 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.0000000000000000000000000000001227 130.0
BYDH2_k127_4931587_6 PFAM cytochrome c class I K08738 - - 0.000000000000000001057 97.0
BYDH2_k127_4931587_7 - - - - 0.000000007153 61.0
BYDH2_k127_4931587_8 RNA pseudouridylate synthase K06177 - 5.4.99.28,5.4.99.29 0.00002461 49.0
BYDH2_k127_4931587_9 - - - - 0.00002569 47.0
BYDH2_k127_4931929_0 type VI secretion protein K11900 - - 2.042e-247 771.0
BYDH2_k127_4931929_1 Type VI secretion K11896 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002999 564.0
BYDH2_k127_4931929_2 Type VI secretion, TssG K11895 - - 0.0000000000000000000000000000000000000000000000000000000000000000000005103 249.0
BYDH2_k127_4931929_3 Type VI secretion system, VipA, VC_A0107 or Hcp2 K11901 - - 0.000000000000000000000000000000000000000000000000000000004183 205.0
BYDH2_k127_4931929_4 COG0542 ATPases with chaperone activity, ATP-binding subunit K11907 - - 0.0000000000000000000000000000000000000000000000000000004393 198.0
BYDH2_k127_4931929_5 Gene 25-like lysozyme K11905 - - 0.00000000000000000000000000176 116.0
BYDH2_k127_4931929_6 Type VI secretion, EvfE, EvfF, ImpA, BimE, VC_A0119, VasJ K11910 - - 0.00000000000000000004781 94.0
BYDH2_k127_4933989_0 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001083 471.0
BYDH2_k127_4933989_1 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001689 287.0
BYDH2_k127_4933989_2 Haem-degrading - - - 0.000000000000000000000000000000000000000000005062 169.0
BYDH2_k127_4933989_3 protein acetylation - - - 0.00000000000000000007408 98.0
BYDH2_k127_496242_0 Belongs to the CarB family K01955 - 6.3.5.5 0.0 1035.0
BYDH2_k127_496242_1 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001836 244.0
BYDH2_k127_496242_2 Domain of unknown function (DUF4149) - - - 0.000000000001005 69.0
BYDH2_k127_4990193_0 cation diffusion facilitator family transporter K16264 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004924 351.0
BYDH2_k127_4990193_1 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000003397 253.0
BYDH2_k127_4990193_2 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.00000000000000000000000000000000000000000000000204 175.0
BYDH2_k127_4994963_0 2 iron, 2 sulfur cluster binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007772 291.0
BYDH2_k127_4994963_1 Predicted membrane protein (DUF2214) K08983 - - 0.0000000000000000000002557 102.0
BYDH2_k127_4994963_2 Belongs to the SlyX family K03745 - - 0.0001125 48.0
BYDH2_k127_5041444_0 Belongs to the beta-ketoacyl-ACP synthases family K00647 - 2.3.1.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000271 615.0
BYDH2_k127_5041444_1 Belongs to the glucose-6-phosphate 1-epimerase family K01792 - 5.1.3.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008944 348.0
BYDH2_k127_5041444_2 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007817 331.0
BYDH2_k127_5041444_3 FabA-like domain - - - 0.000000000000000000000000000005948 119.0
BYDH2_k127_5041444_4 pilus assembly protein FimV K08086 - - 0.000000009501 66.0
BYDH2_k127_508125_0 Bacterial regulatory helix-turn-helix protein, lysR family K13634 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007707 410.0
BYDH2_k127_508125_1 Flagellar Assembly Protein A K09749 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002509 290.0
BYDH2_k127_508125_2 Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme K02302 - 1.3.1.76,2.1.1.107,4.99.1.4 0.0000000000000002401 80.0
BYDH2_k127_5122836_0 peptidase M24B, X-Pro dipeptidase aminopeptidase K01262 - 3.4.11.9 1.809e-200 634.0
BYDH2_k127_5122836_1 Belongs to the UPF0149 family K09895 - - 0.0000000000000000000000000000008018 129.0
BYDH2_k127_5122836_2 TIGRFAM TIGR02449 family protein K09892 - - 0.000001347 53.0
BYDH2_k127_5148182_0 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 - 3.3.1.1 3.391e-248 772.0
BYDH2_k127_5148182_1 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 - 2.5.1.6 1.335e-202 634.0
BYDH2_k127_5148182_2 Methylenetetrahydrofolate reductase K00297 - 1.5.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008506 417.0
BYDH2_k127_5148182_3 PFAM Aminotransferase, class I K00812 - 2.6.1.1 0.00000000000000000000000000005466 117.0
BYDH2_k127_5148182_4 Competence protein ComEA K02237 GO:0005575,GO:0005623,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0044464 - 0.00000000000000011 82.0
BYDH2_k127_5163069_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 6.873e-208 657.0
BYDH2_k127_5218675_0 chemotaxis K13487 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005183 340.0
BYDH2_k127_5218675_1 PFAM CheR methyltransferase, SAM binding domain K13486 - - 0.000000000000000000000000000000000000000000000000000000000000000879 234.0
BYDH2_k127_5218675_2 Two component signalling adaptor domain K13488 - - 0.000000000000000000000000001392 123.0
BYDH2_k127_5231711_0 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase - - - 1.491e-284 887.0
BYDH2_k127_5231711_1 PFAM Polysulphide reductase, NrfD K00185 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001234 528.0
BYDH2_k127_5231711_2 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein K00184 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001792 339.0
BYDH2_k127_5231711_3 4Fe-4S dicluster domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003036 252.0
BYDH2_k127_5231711_4 CobB/CobQ-like glutamine amidotransferase domain K02224 - 6.3.5.11,6.3.5.9 0.0000000000000000000000000000000000000000007044 160.0
BYDH2_k127_5231711_5 - - - - 0.00000000000000000000000000000000003141 139.0
BYDH2_k127_5268680_0 Protein of unknown function, DUF255 - - - 0.0000000000000000000000000000000000000000000000000000000000000008029 224.0
BYDH2_k127_5268680_1 Dual specificity phosphatase, catalytic domain - - - 0.00000000000000000000000000000000000000000006254 165.0
BYDH2_k127_5268680_2 acid phosphatase activity K01179,K21449 - 3.2.1.4 0.00000000000000000000000000006384 124.0
BYDH2_k127_5274516_0 TIGRFAM glutamine synthetase, type I K01915 - 6.3.1.2 9.548e-253 785.0
BYDH2_k127_5274516_1 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.0000000000000000000000000000000000000000000009838 171.0
BYDH2_k127_530626_0 Allophanate hydrolase K01457 - 3.5.1.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003411 472.0
BYDH2_k127_530626_1 Catalyzes the reversible phosphorylation of S-methyl-5'- thioinosine (MTI) to hypoxanthine and 5-methylthioribose-1- phosphate. Involved in the breakdown of S-methyl-5'-thioadenosine (MTA), a major by-product of polyamine biosynthesis. Catabolism of (MTA) occurs via deamination to MTI and phosphorolysis to hypoxanthine K00772,K19696 - 2.4.2.28,2.4.2.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000878 374.0
BYDH2_k127_530626_2 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.00000000000000000000000000000000000000000000000000000000000000000000000004062 252.0
BYDH2_k127_530626_3 phosphoribosyltransferase K00760 - 2.4.2.8 0.000000000000000000000000000000000000000000000000000000000000002727 226.0
BYDH2_k127_530626_4 DsrE/DsrF-like family - - - 0.000000000000000000000008611 105.0
BYDH2_k127_530626_5 Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide-linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N-acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides K01207 - 3.2.1.52 0.000000000004931 67.0
BYDH2_k127_530626_7 - - - - 0.00000001708 60.0
BYDH2_k127_5334141_0 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000005064 235.0
BYDH2_k127_5334141_1 Histidine kinase - - - 0.0000000000000002662 86.0
BYDH2_k127_5364024_0 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003473 288.0
BYDH2_k127_5364024_1 PilZ domain K03406 - - 0.00000000000000000000000000000000000000000000000000007735 194.0
BYDH2_k127_5384514_0 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 3.502e-290 900.0
BYDH2_k127_5384514_1 Haloacid dehalogenase-like hydrolase K20881 - 3.1.3.5 0.0000000000000000000000000000000000000000000000000000000000008535 213.0
BYDH2_k127_5384514_2 Putative zinc- or iron-chelating domain K06940 - - 0.000000000000000000000000000000000000000000000000000000000005635 217.0
BYDH2_k127_5384514_3 Regulatory protein, FmdB family - - - 0.000000000000000000000000000000003953 130.0
BYDH2_k127_5384514_4 Alpha/beta hydrolase family - - - 0.0000000000000000000001546 101.0
BYDH2_k127_5396732_0 FecR protein - - - 5.071e-204 676.0
BYDH2_k127_5396732_1 Histidine Phosphotransfer domain - - - 0.0000000000000000000000000001973 117.0
BYDH2_k127_5396732_2 Domain of Unknown Function (DUF349) - - - 0.000000000000000001396 91.0
BYDH2_k127_5428339_0 PFAM glycosyl transferase family 35 K00688 - 2.4.1.1 3.873e-321 996.0
BYDH2_k127_5428339_1 Domain present in phytochromes and cGMP-specific phosphodiesterases. K01120 - 3.1.4.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002189 423.0
BYDH2_k127_5474044_0 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 GO:0000015,GO:0000287,GO:0003674,GO:0003824,GO:0004634,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005856,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009986,GO:0009987,GO:0016052,GO:0016053,GO:0016310,GO:0016829,GO:0016835,GO:0016836,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0032991,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042802,GO:0042866,GO:0043167,GO:0043169,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046872,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1902494 4.2.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001005 523.0
BYDH2_k127_5474044_1 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic K05589 - - 0.00000000000000000007201 95.0
BYDH2_k127_5475308_0 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA K03500 - 2.1.1.176 0.00000000000000000000000000000000000000000000000000000000002287 208.0
BYDH2_k127_5475308_1 signal transduction histidine kinase - - - 0.00000000000000000000000000000002045 134.0
BYDH2_k127_5475308_2 Domain of unknown function (DUF4390) - - - 0.0000000000000000000000000000009076 132.0
BYDH2_k127_5485521_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001307 464.0
BYDH2_k127_5485521_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002039 330.0
BYDH2_k127_5485521_2 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003726 325.0
BYDH2_k127_5485521_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002927 300.0
BYDH2_k127_5485521_4 PFAM Preprotein translocase SecG subunit K03075 - - 0.00000000000000000000000001047 115.0
BYDH2_k127_5485521_5 Domain of unknown function (DUF4266) - - - 0.000000000000000001075 87.0
BYDH2_k127_5485521_6 Protein of unknown function (DUF3570) - - - 0.0002075 48.0
BYDH2_k127_5492180_0 PFAM glycosyl transferase family 39 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000265 427.0
BYDH2_k127_5492180_1 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005583 414.0
BYDH2_k127_5492180_2 Acid phosphatase homologues - - - 0.00000006964 54.0
BYDH2_k127_5492180_3 Pfam:DUF342 K09749 - - 0.000314 48.0
BYDH2_k127_5529689_0 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K18979 - 1.17.99.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002229 535.0
BYDH2_k127_5529689_1 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002081 477.0
BYDH2_k127_5529689_2 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000182 301.0
BYDH2_k127_5529689_3 3'-to-5' exoribonuclease specific for small oligoribonucleotides K13288 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003989 271.0
BYDH2_k127_5529689_4 pterin-4-alpha-carbinolamine dehydratase K01724 - 4.2.1.96 0.0000000000000000000000000002653 118.0
BYDH2_k127_5529689_5 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.000000002715 58.0
BYDH2_k127_5531046_0 Transporter associated domain K03699 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000958 616.0
BYDH2_k127_5531046_1 Type II secretory pathway, component ExeA - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000509 295.0
BYDH2_k127_5544903_0 COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component K11688 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002387 477.0
BYDH2_k127_5544903_1 Tripartite ATP-independent periplasmic transporters, DctQ component K11689 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003855 271.0
BYDH2_k127_5544903_2 COG1593 TRAP-type C4-dicarboxylate transport system, large permease component K11690 - - 0.000000000000000000000000000000000000000000000003772 173.0
BYDH2_k127_5544903_3 Mercury scavenger that specifically binds to one mercury ion and which passes it to the mercuric reductase (MerA) via the MerT protein K08364 - - 0.000000002355 63.0
BYDH2_k127_5558813_0 Periplasmic binding protein domain K11959 - - 2.007e-241 750.0
BYDH2_k127_5558813_1 Belongs to the binding-protein-dependent transport system permease family K11961 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000265 580.0
BYDH2_k127_5558813_2 Belongs to the binding-protein-dependent transport system permease family K01997,K11960 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002508 576.0
BYDH2_k127_5558813_3 Bacterial protein of unknown function (Gcw_chp) - - - 0.000000000000000000000000000001388 127.0
BYDH2_k127_5572598_0 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000139 577.0
BYDH2_k127_5572598_1 Calcineurin-like phosphoesterase superfamily domain K07095 - - 0.000000000000000000000000000000000000000000000000000000000000000000002862 240.0
BYDH2_k127_5572598_2 Methyltransferase type 11 - - - 0.0000003243 53.0
BYDH2_k127_5572709_0 PFAM NUDIX hydrolase K01515 - 3.6.1.13 0.0000000000000000000000000000000000000000000000000000000000005925 215.0
BYDH2_k127_5572709_1 Gram-negative porin - - - 0.0000000000000000000000000000000000000000000000002449 190.0
BYDH2_k127_5572709_2 - - - - 0.000000000000000000000000000003451 138.0
BYDH2_k127_5572709_3 - - - - 0.000000000002058 74.0
BYDH2_k127_5607470_0 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006024 547.0
BYDH2_k127_5607470_1 protein conserved in bacteria K09859 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007143 323.0
BYDH2_k127_5607470_2 COG3417 Collagen-binding surface adhesin SpaP (antigen I II family) K07337 - - 0.0000000000000000000000000000000000000000000000000000000000000000000008048 242.0
BYDH2_k127_5607470_3 Belongs to the aldehyde dehydrogenase family K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 0.00000000000000000000000000000000000001385 145.0
BYDH2_k127_5607470_4 LPP20 lipoprotein - - - 0.0000000000000000000000000000000276 133.0
BYDH2_k127_5607470_5 Outer membrane lipoprotein - - - 0.00000000000000000000001966 110.0
BYDH2_k127_5607470_6 Sel1-like repeats. K07126 - - 0.0000000000003201 75.0
BYDH2_k127_5607470_7 Putative beta-barrel porin-2, OmpL-like. bbp2 - - - 0.000002257 59.0
BYDH2_k127_5617659_0 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001267 548.0
BYDH2_k127_5617659_1 peptidase - - - 0.00000000000000000000000000000000002749 136.0
BYDH2_k127_5617781_0 heat shock protein binding - - - 1.352e-234 756.0
BYDH2_k127_5617781_1 heat shock protein binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005632 528.0
BYDH2_k127_5617781_2 4Fe-4S binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000477 520.0
BYDH2_k127_5617781_3 COGs COG0790 FOG TPR repeat SEL1 subfamily K07126 - - 0.000000000000000000000000000000000000000000004542 184.0
BYDH2_k127_5617781_4 ferredoxin-NADP+ reductase activity - - - 0.0000000000000000000000000000000000000001119 165.0
BYDH2_k127_5617781_5 PFAM Ankyrin K06867 - - 0.0000000000000000001033 95.0
BYDH2_k127_5617781_6 cytochrome complex assembly K02200 - - 0.0000607 53.0
BYDH2_k127_5620089_0 Glutamine amidotransferase class-I K01951 - 6.3.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000002463 260.0
BYDH2_k127_5620089_1 pfam mofrl K11529 - 2.7.1.165 0.0000000000000000000000000001088 117.0
BYDH2_k127_5620089_2 Aspartyl protease K06985 - - 0.00000000000000000000000001432 117.0
BYDH2_k127_5633830_0 helix_turn_helix, mercury resistance - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001682 285.0
BYDH2_k127_5633830_1 Belongs to the glutathione peroxidase family - - - 0.00000000000000000000000000000000000000000000000000000000000001174 220.0
BYDH2_k127_5633830_2 DNA photolyase K01669 - 4.1.99.3 0.000000000000000000000000000000000000000000000000001173 188.0
BYDH2_k127_5633830_3 Protein of unknown function (DUF1722) - - - 0.00000000000000000005934 90.0
BYDH2_k127_5646075_0 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766 - 2.4.2.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008786 454.0
BYDH2_k127_5646075_1 Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine K01611 GO:0003674,GO:0003824,GO:0004014,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006576,GO:0006595,GO:0006596,GO:0006807,GO:0008150,GO:0008152,GO:0008216,GO:0008295,GO:0009058,GO:0009308,GO:0009309,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0034641,GO:0042401,GO:0044106,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0097164,GO:1901564,GO:1901566,GO:1901576 4.1.1.50 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002331 421.0
BYDH2_k127_5646075_2 Belongs to the TrpC family K01609 GO:0003674,GO:0003824,GO:0004425,GO:0016829,GO:0016830,GO:0016831 4.1.1.48 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003712 359.0
BYDH2_k127_5646075_3 with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine K01658 - 4.1.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001304 321.0
BYDH2_k127_5646075_4 helix_turn_helix, cAMP Regulatory protein K10914 GO:0000166,GO:0003674,GO:0003676,GO:0003677,GO:0003700,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006355,GO:0006725,GO:0006807,GO:0007154,GO:0007584,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009605,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0009991,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0016070,GO:0017076,GO:0018130,GO:0019001,GO:0019219,GO:0019222,GO:0019438,GO:0030551,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031667,GO:0031668,GO:0031669,GO:0031670,GO:0032553,GO:0032555,GO:0032561,GO:0032774,GO:0032991,GO:0032993,GO:0034641,GO:0034645,GO:0034654,GO:0035438,GO:0036094,GO:0042221,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0045013,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0045990,GO:0046483,GO:0046983,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0051716,GO:0060255,GO:0061984,GO:0061985,GO:0065007,GO:0070887,GO:0071496,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0097367,GO:0097659,GO:0140110,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:2000112,GO:2000113,GO:2001141 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005772 312.0
BYDH2_k127_5646075_5 Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol K06134 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003887 278.0
BYDH2_k127_5646075_6 OsmC-like protein K07397 - - 0.0000000000000000000000000000000000000000000000000000000000007817 214.0
BYDH2_k127_5646075_7 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 0.0000000000000000000000000000000000000000000000000000000001894 204.0
BYDH2_k127_5646075_8 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000000000000000000000000000000000000005025 184.0
BYDH2_k127_5725098_0 Flagella basal body rod protein K02392 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004157 371.0
BYDH2_k127_5725098_1 Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation K02394 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006753 357.0
BYDH2_k127_5725098_2 Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation K02393 - - 0.0000000000000000000000000000000000000000000000000000000000001853 222.0
BYDH2_k127_5725098_3 TIGRFAM flagellar basal-body rod protein FlgF K02391 - - 0.000000000000000000000000000000000000000000000000001783 186.0
BYDH2_k127_5732133_0 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0042802,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008112 450.0
BYDH2_k127_5732133_1 transcriptional - - - 0.0000000000000000000000000000000000000000000000000000001663 196.0
BYDH2_k127_5732133_2 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K04764 GO:0000976,GO:0001067,GO:0001130,GO:0001216,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0019219,GO:0019222,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032991,GO:0032993,GO:0043565,GO:0044212,GO:0044424,GO:0044444,GO:0044464,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902680,GO:1903506,GO:1903508,GO:1990837,GO:2000112,GO:2001141 - 0.000000000000000000000000000000000000000004098 158.0
BYDH2_k127_5732133_3 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006950,GO:0007154,GO:0008150,GO:0009267,GO:0009605,GO:0009987,GO:0009991,GO:0016020,GO:0030312,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0042221,GO:0042594,GO:0044424,GO:0044444,GO:0044464,GO:0046677,GO:0050896,GO:0051716,GO:0071496,GO:0071944 - 0.0000015 51.0
BYDH2_k127_5736264_0 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003453 303.0
BYDH2_k127_5736264_1 Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K03269 - 3.6.1.54 0.0000000000000000000000000000000000000000000000000000000000000000000000000005798 262.0
BYDH2_k127_5736264_2 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03768 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000001185 240.0
BYDH2_k127_5736264_3 Protein of unknown function (DUF455) K11529 - 2.7.1.165 0.0000000000000000000000000000000000000000000000000000000000003333 214.0
BYDH2_k127_5736264_4 Cold shock K03704 - - 0.00000000000000000000000005035 108.0
BYDH2_k127_5736264_5 - - - - 0.0000000000000000000006421 104.0
BYDH2_k127_5767355_0 SCP-2 sterol transfer family - - - 0.00000000000000000000000000000000000000000000000000000000000000002961 227.0
BYDH2_k127_5767355_1 COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain - - - 0.0000000000000000000000000000000000000000000000000001897 198.0
BYDH2_k127_5767355_2 alpha-ribazole phosphatase activity - - - 0.000000000000000000000000000000000000000000000000000537 190.0
BYDH2_k127_5767355_3 GIY-YIG catalytic domain K07461 - - 0.00000000000000000005268 93.0
BYDH2_k127_5771940_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 2.809e-274 856.0
BYDH2_k127_5772432_0 Protein of unknown function DUF86 - - - 0.00000000000000000000000000000000000429 144.0
BYDH2_k127_5772432_1 - - - - 0.00000000000000000000000000000000118 141.0
BYDH2_k127_5772432_2 Protein of unknown function (DUF504) - - - 0.00000000000000000000000000007566 117.0
BYDH2_k127_5772432_3 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K01563,K11991 - 3.5.4.33,3.8.1.5 0.000000000000000001711 85.0
BYDH2_k127_5772432_4 domain protein - - - 0.000000000000006176 85.0
BYDH2_k127_5772432_5 Nucleotidyltransferase domain K07075 - - 0.0000000000000267 77.0
BYDH2_k127_5777072_0 Biopolymer transport protein ExbD TolR K03559 - - 0.00000000000000000000000000000000000000000000000000000001156 201.0
BYDH2_k127_5777072_1 TonB C terminal - - - 0.0000000000000000000000000000000000001281 149.0
BYDH2_k127_5777072_2 Domain of unknown function (DUF2341) K03561 - - 0.00000000000000000003248 90.0
BYDH2_k127_5777072_3 Prephenate dehydratase K04518,K14170 - 4.2.1.51,5.4.99.5 0.00000002409 61.0
BYDH2_k127_5780752_0 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 1.788e-252 784.0
BYDH2_k127_5780752_1 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004073,GO:0006082,GO:0006520,GO:0006549,GO:0006553,GO:0006555,GO:0006566,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009081,GO:0009082,GO:0009085,GO:0009086,GO:0009088,GO:0009089,GO:0009097,GO:0009987,GO:0016053,GO:0016491,GO:0016620,GO:0016903,GO:0019752,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046451,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.2.1.11 9.662e-197 617.0
BYDH2_k127_5780752_2 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 GO:0003674,GO:0003824,GO:0003862,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006551,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009098,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.85 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006155 528.0
BYDH2_k127_5780752_3 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002706 355.0
BYDH2_k127_5780752_4 COG3170 Tfp pilus assembly protein FimV K08086 - - 0.00000000000000000000000000000001392 134.0
BYDH2_k127_5780752_5 Protein of unknown function (DUF2288) - - - 0.000000001551 61.0
BYDH2_k127_5796936_0 Helix-turn-helix domain - - - 0.00000000000000000000000000000000000000000000000000001922 194.0
BYDH2_k127_5796936_1 diguanylate cyclase - - - 0.000000000000000000000000000000000000000000425 167.0
BYDH2_k127_5796936_2 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.00000000000000000000000000000000000000009414 159.0
BYDH2_k127_5796936_3 cheY-homologous receiver domain - - - 0.0000000000000000001135 94.0
BYDH2_k127_5796936_4 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.0000000004807 61.0
BYDH2_k127_5839569_0 PFAM 20S proteasome, A and B subunits K07395 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001235 325.0
BYDH2_k127_5839569_1 transglutaminase domain protein - - - 0.000000000000000000000000001068 113.0
BYDH2_k127_5839569_2 Circularly permuted ATP-grasp type 2 - - - 0.0000009651 52.0
BYDH2_k127_5855652_2 - - - - 0.00000000000000000000000000000000000000000000000003596 192.0
BYDH2_k127_5866393_0 Catalyzes cross-linking of the peptidoglycan cell wall K05515 - 3.4.16.4 1.653e-204 653.0
BYDH2_k127_5866393_1 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001162 485.0
BYDH2_k127_5866393_2 Lytic murein transglycosylase B K08305 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005606 332.0
BYDH2_k127_5866393_3 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.0000000000000000000000000000000000000000000000000000000007133 207.0
BYDH2_k127_5866393_4 Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins K03571 - - 0.000000000000000000000000000000000000000000000173 172.0
BYDH2_k127_5884772_0 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 - 3.2.2.23,4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006403 284.0
BYDH2_k127_5884772_1 Asparagine synthase, glutamine-hydrolyzing K01953 - 6.3.5.4 0.000000000000000000000006899 112.0
BYDH2_k127_5894580_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 GO:0003674,GO:0003824,GO:0004812,GO:0004822,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006428,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.5 0.0 1073.0
BYDH2_k127_5894580_1 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.0000000000000000000000000000000000000000000000000000000004471 206.0
BYDH2_k127_5894580_2 COG1047 FKBP-type peptidyl-prolyl cis-trans isomerases 2 K03774 GO:0000413,GO:0003674,GO:0003755,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0016859,GO:0018193,GO:0018208,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0061077,GO:0071704,GO:0140096,GO:1901564 5.2.1.8 0.000000000003094 68.0
BYDH2_k127_5898370_0 Radical SAM superfamily K04069 - 1.97.1.4 9.662e-197 617.0
BYDH2_k127_5898370_1 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 GO:0003674,GO:0003824,GO:0004654,GO:0006139,GO:0006401,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:1901360,GO:1901361,GO:1901575 2.7.7.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004942 574.0
BYDH2_k127_5898370_2 Molybdenum cofactor biosynthesis K03638,K03831 - 2.7.7.75 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005004 272.0
BYDH2_k127_5918651_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 8.645e-319 987.0
BYDH2_k127_5918651_1 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001437 524.0
BYDH2_k127_5918651_2 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 - 1.17.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006549 365.0
BYDH2_k127_5918651_3 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0042802,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001247 295.0
BYDH2_k127_5918651_4 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002957 250.0
BYDH2_k127_5918651_5 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 - - 0.000000000000000000000000000000000000000000000000003389 183.0
BYDH2_k127_5918651_6 Belongs to the bacterial ribosomal protein bL35 family K02916 - - 0.00000000000000000001436 92.0
BYDH2_k127_5962900_0 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 4.472e-252 806.0
BYDH2_k127_5962900_1 Belongs to the pirin family K06911 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001163 327.0
BYDH2_k127_5962900_2 Domain of unknown function (DUF4399) - - - 0.0000000000000000000000000000000000009703 145.0
BYDH2_k127_5962900_3 of membrane protease K07340 - - 0.000000000000000000000000004219 115.0
BYDH2_k127_5962900_4 acetyltransferase K03789 - 2.3.1.128 0.000000000000000000000008016 106.0
BYDH2_k127_5983979_0 associated with various cellular activities - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002272 511.0
BYDH2_k127_5983979_1 VWA-like domain (DUF2201) - - - 0.000000000000000000005201 95.0
BYDH2_k127_5996326_0 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003498 378.0
BYDH2_k127_5996326_1 Response regulator, receiver - - - 0.00002999 51.0
BYDH2_k127_6010733_0 Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate K01807 - 5.3.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004494 329.0
BYDH2_k127_6010733_1 COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain - - - 0.00000000000000000000000000000000000000000000000000000007629 211.0
BYDH2_k127_6010733_2 ABC transporter, permease protein K02004 - - 0.00000000000000000000000000000000000000000001108 165.0
BYDH2_k127_6010733_3 - - - - 0.000000000000000008485 92.0
BYDH2_k127_6015600_0 Belongs to the anaerobic coproporphyrinogen-III oxidase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002833 384.0
BYDH2_k127_6015600_1 Doubled CXXCH motif (Paired_CXXCH_1) - - - 0.0000000000000000000000000000000000000000006941 159.0
BYDH2_k127_6015600_2 Lactonase, 7-bladed beta-propeller - - - 0.000000000000000000000000000105 134.0
BYDH2_k127_6015600_3 Lactonase, 7-bladed beta-propeller - - - 0.0000000000000111 88.0
BYDH2_k127_6017506_0 Binding-protein-dependent transport system inner membrane component K02011 - - 1.869e-204 650.0
BYDH2_k127_6017506_1 Bacterial extracellular solute-binding protein K02012 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005418 516.0
BYDH2_k127_6017506_2 antisigma factor binding - - - 0.0000000000000000000388 101.0
BYDH2_k127_6017506_3 Belongs to the ABC transporter superfamily K02010 - 3.6.3.30 0.00000000000003782 73.0
BYDH2_k127_6039864_0 response regulator receiver K02481 - - 6.117e-194 614.0
BYDH2_k127_6039864_1 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004777 554.0
BYDH2_k127_6039864_2 Sugar transferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003336 458.0
BYDH2_k127_6039864_3 Type II secretory pathway, component ExeA - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005869 314.0
BYDH2_k127_6039864_4 COG0457 FOG TPR repeat - - - 0.0000000000000000005551 98.0
BYDH2_k127_6054975_0 ZIP Zinc transporter K16267 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001392 379.0
BYDH2_k127_6054975_1 Belongs to the Dps family K04047 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000074 303.0
BYDH2_k127_6054975_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000021 225.0
BYDH2_k127_6056459_0 ABC transporter - - - 3.747e-300 927.0
BYDH2_k127_6056459_1 AAA domain - - - 3.742e-266 841.0
BYDH2_k127_6056459_2 Belongs to the anaerobic coproporphyrinogen-III oxidase family - - - 6.927e-211 668.0
BYDH2_k127_6056459_3 Specifically methylates the 50S ribosomal protein L3 on a specific glutamine residue K07320 - 2.1.1.298 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002297 380.0
BYDH2_k127_6056459_4 long-chain fatty acid transport protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005407 314.0
BYDH2_k127_6056459_5 Peptidase m48 ste24p - - - 0.00000000000000000000000000000000000000000000000000000007635 205.0
BYDH2_k127_6056459_6 nuclease - - - 0.0000000000000000003565 94.0
BYDH2_k127_6056459_7 Protein of unknown function (DUF2914) - - - 0.00000000000000000141 93.0
BYDH2_k127_6056459_8 - - - - 0.00000006948 54.0
BYDH2_k127_6061529_0 DNA internalization-related competence protein ComEC Rec2 K02238 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004083 273.0
BYDH2_k127_6061529_1 PFAM MotA TolQ ExbB proton channel K03561 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002445 266.0
BYDH2_k127_6061529_2 COG0848 Biopolymer transport protein K03559 - - 0.0000000000000000000000000000000000000284 149.0
BYDH2_k127_6061529_3 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.0000000009091 61.0
BYDH2_k127_6069449_0 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 GO:0000270,GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006022,GO:0006807,GO:0008150,GO:0008152,GO:0008932,GO:0008933,GO:0016020,GO:0016021,GO:0016740,GO:0016757,GO:0030203,GO:0030288,GO:0030313,GO:0031224,GO:0031226,GO:0031975,GO:0042597,GO:0043170,GO:0044425,GO:0044459,GO:0044464,GO:0061783,GO:0071704,GO:0071944,GO:1901135,GO:1901564 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002752 401.0
BYDH2_k127_6069449_1 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 GO:0003674,GO:0003824,GO:0004798,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009165,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.4.9 0.000000000000000000000000000000000000000000000000000000000000000000000000007303 262.0
BYDH2_k127_6069449_2 PFAM Aminotransferase, class IV K02619 - 4.1.3.38 0.000000000000000000000000000000000000000000000000000007174 194.0
BYDH2_k127_6069449_3 COG0470 ATPase involved in DNA replication K02341 GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009360,GO:0009987,GO:0032991,GO:0034641,GO:0034645,GO:0042575,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0061695,GO:0071704,GO:0090304,GO:1901360,GO:1901576,GO:1902494,GO:1990234 2.7.7.7 0.00000000000000000000000000000000000000000000000000005039 195.0
BYDH2_k127_6080636_0 Acts as a magnesium transporter K06213 - - 1.045e-216 681.0
BYDH2_k127_6080636_1 long-chain fatty acid transporting porin activity K07267 - - 0.0000000000000000000000000000000000000000008525 171.0
BYDH2_k127_6080636_2 COG0226 ABC-type phosphate transport system, periplasmic component - - - 0.000000000000000000000004816 106.0
BYDH2_k127_6080636_3 - - - - 0.00000000000000000001934 95.0
BYDH2_k127_6080636_4 Copper binding periplasmic protein CusF - - - 0.0000000001607 66.0
BYDH2_k127_6080636_5 Patatin-like phospholipase K07001 - - 0.00000002945 57.0
BYDH2_k127_6082421_0 Spermidine synthase K00797 - 2.5.1.16 5.037e-214 694.0
BYDH2_k127_6082421_1 4 iron, 4 sulfur cluster binding K02574 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007872 513.0
BYDH2_k127_6082421_10 Bacterial-like globin K06886 - - 0.00000000000000000000000000000000000000000000000000000000003283 206.0
BYDH2_k127_6082421_11 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000004966 198.0
BYDH2_k127_6082421_12 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000001631 184.0
BYDH2_k127_6082421_13 - - - - 0.00000000000000000000000000000000006993 138.0
BYDH2_k127_6082421_14 - - - - 0.00000000000000000000000000001971 130.0
BYDH2_k127_6082421_15 regulator - - - 0.0000000000000000000000009685 115.0
BYDH2_k127_6082421_16 - - - - 0.0000000000000000001624 93.0
BYDH2_k127_6082421_17 - - - - 0.00000000000000008124 85.0
BYDH2_k127_6082421_18 - - - - 0.00000000001467 69.0
BYDH2_k127_6082421_2 peptidase M48, Ste24p - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003846 508.0
BYDH2_k127_6082421_20 PilZ domain - - - 0.00000001977 64.0
BYDH2_k127_6082421_3 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003574 379.0
BYDH2_k127_6082421_4 Sulfatase-modifying factor enzyme 1 K20333 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001279 373.0
BYDH2_k127_6082421_5 Oxidoreductase FAD-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001084 349.0
BYDH2_k127_6082421_6 PFAM response regulator receiver - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001805 359.0
BYDH2_k127_6082421_7 Phosphotransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005536 334.0
BYDH2_k127_6082421_8 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001255 296.0
BYDH2_k127_6082421_9 PFAM methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001648 254.0
BYDH2_k127_6091355_0 Mycolic acid cyclopropane synthetase K00574 - 2.1.1.79 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005903 480.0
BYDH2_k127_6091355_1 Protein of unknown function (DUF1722) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001101 302.0
BYDH2_k127_6091355_2 Protein of unknown function (DUF2878) - - - 0.0000000000000000000000000000001798 130.0
BYDH2_k127_6091355_3 Protein of unknown function (DUF2892) - - - 0.000369 46.0
BYDH2_k127_6123133_0 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 8.867e-264 820.0
BYDH2_k127_6123133_1 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.000000000000000000000000000000000004239 140.0
BYDH2_k127_6152868_0 response regulator receiver K02487,K06596 - - 8.019e-212 675.0
BYDH2_k127_6152868_1 CheB methylesterase K06597 - - 0.00004244 52.0
BYDH2_k127_6165098_0 reductase, dissimilatory-type alpha subunit K11180 - 1.8.99.5 8.39e-220 687.0
BYDH2_k127_6165098_1 Nitrite and sulphite reductase 4Fe-4S domain K11181 - 1.8.99.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006611 314.0
BYDH2_k127_6165098_2 Taurine catabolism dioxygenase TauD, TfdA family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001328 248.0
BYDH2_k127_620278_0 TIGRFAM Serine O-acetyltransferase K00640 - 2.3.1.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001473 369.0
BYDH2_k127_620278_1 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003884 302.0
BYDH2_k127_620278_2 Regulates the transcription of several operons and genes involved in the biogenesis of Fe-S clusters and Fe-S-containing proteins K13643 - - 0.000000000000000000000000000000000000000000000000000000000000162 215.0
BYDH2_k127_620278_3 Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA K02533,K15396 - 2.1.1.200 0.00000000000000000000000000000000000005539 146.0
BYDH2_k127_6220369_0 O-linked N-acetylglucosamine transferase, SPINDLY family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102 514.0
BYDH2_k127_6220369_1 Cephalosporin hydroxylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002431 411.0
BYDH2_k127_6220369_2 C-methyltransferase C-terminal domain - - - 0.000000000000000000000000002388 112.0
BYDH2_k127_6260417_0 glucan 1,4-alpha-glucosidase activity K01178 - 3.2.1.3 1.961e-222 699.0
BYDH2_k127_6260417_1 Thioredoxin-like domain - - - 0.000000000000000000000000000005104 125.0
BYDH2_k127_6260417_2 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.0000000009938 63.0
BYDH2_k127_6308019_0 membrane protein domain - - - 0.0000000000000000000000000000000000000000000000000000000002094 207.0
BYDH2_k127_6308019_1 - - - - 0.00000000000000000000000000000002401 130.0
BYDH2_k127_6308019_2 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455 - - 0.00000000000000000000000000000006393 126.0
BYDH2_k127_6308019_3 - - - - 0.00000000000000004417 88.0
BYDH2_k127_6308019_4 - - - - 0.000000002243 65.0
BYDH2_k127_6311018_0 SPTR Response regulator receiver modulated diguanylate cyclase phosphodiesterase with PAS PAC sensor(S) (Modular protein) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000335 261.0
BYDH2_k127_6311018_1 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455 - - 0.0000000000000000000000000000001089 130.0
BYDH2_k127_6311018_2 threonine efflux protein - - - 0.00000008262 57.0
BYDH2_k127_6327931_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005598 323.0
BYDH2_k127_6327931_1 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001554 327.0
BYDH2_k127_6339021_0 Signal transducing histidine kinase, homodimeric domain K02487,K06596 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003118 334.0
BYDH2_k127_6339021_1 Spermidine synthase K00797 - 2.5.1.16 0.00000000000000000000000005837 109.0
BYDH2_k127_6399516_0 Carbohydrate phosphorylase K00688 - 2.4.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002145 590.0
BYDH2_k127_6399516_1 phosphoglycerate mutase activity K01834 GO:0003674,GO:0003824,GO:0004619,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006109,GO:0006139,GO:0006140,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009894,GO:0009987,GO:0010675,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016866,GO:0016868,GO:0017144,GO:0018130,GO:0019219,GO:0019220,GO:0019222,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0031323,GO:0031329,GO:0032787,GO:0034248,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0043455,GO:0043456,GO:0043470,GO:0043471,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046538,GO:0046700,GO:0046939,GO:0050789,GO:0050794,GO:0051171,GO:0051174,GO:0051186,GO:0051188,GO:0051193,GO:0051196,GO:0055086,GO:0060255,GO:0062012,GO:0065007,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0080090,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1902031 5.4.2.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002736 323.0
BYDH2_k127_6399516_2 Fatty acid desaturase K10255 - 1.14.19.23,1.14.19.45 0.0000000000000000000000000000000000000000000000000000000000000008577 224.0
BYDH2_k127_6412482_0 STAS domain K03321 - - 6.338e-234 738.0
BYDH2_k127_6412482_1 PFAM sodium calcium exchanger membrane region K07301 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003274 496.0
BYDH2_k127_6412482_2 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007834 348.0
BYDH2_k127_6412482_3 Domain of unknown function (DUF4336) - - - 0.00000000000000000000000000000000000000000000000000001871 200.0
BYDH2_k127_6412482_4 Chromate resistance exported protein - - - 0.00000000000000000000001515 100.0
BYDH2_k127_6412482_5 - - - - 0.00001109 55.0
BYDH2_k127_641881_0 ABC transporter K15738 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003193 343.0
BYDH2_k127_641881_1 Methyl-accepting chemotaxis protein K03406 - - 0.000000000000000000000000000000000000000000000000000007547 199.0
BYDH2_k127_641881_2 Mycobacterial 4 TMS phage holin, superfamily IV K08972 - - 0.000000000000000000000000000693 120.0
BYDH2_k127_641881_3 transmembrane signaling receptor activity - - - 0.000000000000000000009936 96.0
BYDH2_k127_6428811_0 Alpha/beta hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004011 280.0
BYDH2_k127_6428811_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000127 254.0
BYDH2_k127_6428811_2 PFAM SNARE associated Golgi protein K03975 - - 0.0000000000000000000000000000000000000000000000000000000005394 205.0
BYDH2_k127_6434628_0 Fatty acid desaturase K10255 - 1.14.19.23,1.14.19.45 0.000000000000000000000000000000000000000000000000000000000000000000000006197 245.0
BYDH2_k127_6434628_1 part of a sulfur-relay system K11179 - - 0.000000000000000000000000000000000001486 144.0
BYDH2_k127_6434628_2 - - - - 0.0000003848 59.0
BYDH2_k127_6464602_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00372 - - 2.089e-220 696.0
BYDH2_k127_6464602_1 PFAM Citrate transporter - - - 2.553e-200 632.0
BYDH2_k127_6464602_2 TonB-dependent receptor - - - 0.000000000000000000000000000000000000000009987 164.0
BYDH2_k127_6464602_3 TonB-dependent receptor - - - 0.000000000000000007597 86.0
BYDH2_k127_6464602_4 Putative prokaryotic signal transducing protein - - - 0.000000000000005412 77.0
BYDH2_k127_6488948_0 Putative porin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001666 455.0
BYDH2_k127_6488948_2 - - - - 0.00001384 56.0
BYDH2_k127_650280_0 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007 - 2.7.9.2 2.845e-258 810.0
BYDH2_k127_650280_1 Phosphoglucomutase K01835 - 5.4.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008451 412.0
BYDH2_k127_6527120_0 Phosphomethylpyrimidine kinase K00941 - 2.7.1.49,2.7.4.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008902 370.0
BYDH2_k127_6527120_1 Uncharacterised protein family (UPF0093) K08973 - - 0.00000000000000000000000000000000000000000000000000000000009073 209.0
BYDH2_k127_6527120_2 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 - 2.5.1.3 0.00000000000000000000000000000000000000000000000005013 184.0
BYDH2_k127_6527120_3 Domain of unknown function (DUF4398) - - - 0.000000000000000000000000001182 117.0
BYDH2_k127_6538588_0 Protein of unknown function - - - 0.000000000000000000000000000000000000000000000000000000000000000001425 241.0
BYDH2_k127_6538588_1 Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K11206 - - 0.0000000000002048 71.0
BYDH2_k127_6547412_0 Glycosyltransferase family 92 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002331 325.0
BYDH2_k127_6547412_1 - - - - 0.000000000000000006414 87.0
BYDH2_k127_6547412_2 TIGRFAM lipopolysaccharide heptosyltransferase I K02841 - - 0.00000000000001055 76.0
BYDH2_k127_6554786_0 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 7.715e-220 691.0
BYDH2_k127_6554786_1 Belongs to the bacterial glucokinase family K00845 - 2.7.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004687 345.0
BYDH2_k127_6554786_2 6-phosphogluconate dehydrogenase, C-terminal domain K00033 - 1.1.1.343,1.1.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000001878 258.0
BYDH2_k127_6609386_0 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 - 1.17.7.1,1.17.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008573 563.0
BYDH2_k127_6609386_1 histidyl-tRNA synthetase K01892 - 6.1.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004583 486.0
BYDH2_k127_6622508_0 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 2.279e-240 751.0
BYDH2_k127_6622508_1 Cytochrome b(N-terminal)/b6/petB K00412 - - 3.494e-203 638.0
BYDH2_k127_6622508_2 Catalyzes the formation of L-homocysteine from O- succinyl-L-homoserine (OSHS) and hydrogen sulfide K10764 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008993 604.0
BYDH2_k127_6622508_3 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal K00411 - 1.10.2.2 0.00000000000000000000000000000000000000000000000000000000000000000007756 234.0
BYDH2_k127_6622508_4 Sulfatase - - - 0.00000000000000000000000000000000000000000000000000000000000000404 237.0
BYDH2_k127_6622508_5 Colicin v production K03558 GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0008152,GO:0009058,GO:0009403,GO:0009404,GO:0009987,GO:0016020,GO:0019748,GO:0044237,GO:0044249,GO:0044464,GO:0044550,GO:0071944 - 0.000000000000000000000000000000000000001806 152.0
BYDH2_k127_6622508_6 Protein conserved in bacteria K03749 - - 0.00000000000004535 75.0
BYDH2_k127_6622508_7 Cytochrome C1 family K00413 - - 0.00007283 48.0
BYDH2_k127_6643111_0 Sodium/calcium exchanger protein K07301 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005382 282.0
BYDH2_k127_6643111_1 membrane transporter protein K07090 - - 0.00000000000000000000000000000000000000000000000004746 178.0
BYDH2_k127_6643111_2 Membrane - - - 0.000000000000000000000000000000000007769 142.0
BYDH2_k127_6672249_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009314,GO:0009380,GO:0009628,GO:0032991,GO:0042802,GO:0044424,GO:0044464,GO:0050896,GO:1902494,GO:1905347,GO:1905348,GO:1990391 - 1.506e-262 816.0
BYDH2_k127_6672249_1 PFAM Aminotransferase class I and II K00812 - 2.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009635 591.0
BYDH2_k127_6672249_2 RES - - - 0.0003987 44.0
BYDH2_k127_6673868_0 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01916,K01950 - 6.3.1.5,6.3.5.1 8.722e-206 651.0
BYDH2_k127_6673868_1 Responsible for synthesis of pseudouridine from uracil K06180 GO:0000027,GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022607,GO:0022613,GO:0022618,GO:0031118,GO:0034470,GO:0034622,GO:0034641,GO:0034660,GO:0042254,GO:0042255,GO:0042273,GO:0043170,GO:0043412,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:1901360 5.4.99.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002243 392.0
BYDH2_k127_6673868_2 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K05807 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001305 260.0
BYDH2_k127_6673868_3 Belongs to the P(II) protein family K04751 GO:0000166,GO:0003674,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006808,GO:0008144,GO:0008150,GO:0009889,GO:0010565,GO:0017076,GO:0019216,GO:0019217,GO:0019222,GO:0030234,GO:0030554,GO:0031323,GO:0031326,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042304,GO:0042802,GO:0043167,GO:0043168,GO:0044424,GO:0044444,GO:0044464,GO:0046890,GO:0050789,GO:0050790,GO:0050794,GO:0062012,GO:0065007,GO:0065009,GO:0080090,GO:0097159,GO:0097367,GO:0098772,GO:1901265,GO:1901363 - 0.0000000000000000000000000000000000000000000000000000001101 198.0
BYDH2_k127_6673868_4 Belongs to the multicopper oxidase YfiH RL5 family K05810 - - 0.0000000000000001367 80.0
BYDH2_k127_6680165_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006836 429.0
BYDH2_k127_6680165_1 glyoxalase III activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000337 266.0
BYDH2_k127_6680165_2 RibD C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000002122 199.0
BYDH2_k127_6680165_3 Antibiotic biosynthesis monooxygenase - - - 0.000000000000000000000000000000000000000000002622 165.0
BYDH2_k127_6680165_4 - - - - 0.00000000000000000000000000000003217 132.0
BYDH2_k127_6680165_5 Sugar (and other) transporter - - - 0.000000000000000000000000000000143 124.0
BYDH2_k127_6680298_0 Belongs to the UPF0758 family K03630 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004149 353.0
BYDH2_k127_6680298_1 Serine/threonine phosphatases, family 2C, catalytic domain K20074 - 3.1.3.16 0.000000000000000000000000000000000000000000000000000000000000000000001742 246.0
BYDH2_k127_6680298_2 serine threonine protein kinase - - - 0.000000006051 59.0
BYDH2_k127_6697236_0 FAD binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000294 551.0
BYDH2_k127_6697236_1 Glutathione S-transferase, N-terminal domain K00799 - 2.5.1.18 0.000000000000000000000000008291 110.0
BYDH2_k127_6743915_0 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 - 2.1.1.199 0.000000000000000000000000000000000000000000000000000000000000000000003232 240.0
BYDH2_k127_6743915_1 MraZ protein, putative antitoxin-like K03925 - - 0.000000000000000000000000000000000000000001806 161.0
BYDH2_k127_6743915_2 ubiE/COQ5 methyltransferase family - - - 0.0000000000000000000000000000009144 132.0
BYDH2_k127_6743915_3 - - - - 0.00000000000000000000005831 109.0
BYDH2_k127_6747657_0 PFAM UvrD REP helicase K03657 - 3.6.4.12 5.526e-299 930.0
BYDH2_k127_6747657_1 Part of the tripartite ATP-independent periplasmic (TRAP) transport system - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002951 512.0
BYDH2_k127_6747657_2 COG4664 TRAP-type mannitol chloroaromatic compound transport system, large permease component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003243 337.0
BYDH2_k127_6752060_0 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006124 546.0
BYDH2_k127_6752060_1 MobA-like NTP transferase domain - - - 0.000000000000000000001377 96.0
BYDH2_k127_6760101_0 Adenylate cyclase K05851 GO:0003674,GO:0003824,GO:0004016,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006171,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009187,GO:0009190,GO:0009259,GO:0009260,GO:0009975,GO:0009987,GO:0016829,GO:0016849,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046058,GO:0046390,GO:0046483,GO:0052652,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.6.1.1 1.246e-231 748.0
BYDH2_k127_6760101_1 general secretion pathway protein G K02456 - - 0.000000000000000000000000000000000000000000000000000000000000000278 222.0
BYDH2_k127_6760101_2 PFAM phospholipase Carboxylesterase K06999 - - 0.0000000000000000000000000000000000000008786 151.0
BYDH2_k127_6760101_3 Rhomboid family - - - 0.0000000000000000000000000000000000000309 150.0
BYDH2_k127_6760101_4 Diguanylate cyclase, GGDEF domain - - - 0.00000000000000000000000000000004874 135.0
BYDH2_k127_6786390_0 TIGRFAM asparagine synthase (glutamine-hydrolyzing) K01953 - 6.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001587 484.0
BYDH2_k127_6786390_1 COGs COG0318 Acyl-CoA synthetase (AMP-forming) AMP-acid ligase II K00666,K01897 - 6.2.1.3 0.000000000000000000000000000000000000000000000000000000005809 210.0
BYDH2_k127_6786390_2 Phosphopantetheine attachment site - - - 0.00000000000000000000000006747 108.0
BYDH2_k127_6786390_3 GtrA-like protein - - - 0.000000000000000000000002543 107.0
BYDH2_k127_6800538_0 Cation transporter/ATPase, N-terminus K01537 - 3.6.3.8 3.993e-276 858.0
BYDH2_k127_6800538_1 YMGG-like Gly-zipper - - - 0.0000000000000000000000000000000000000000000000000000000000005739 222.0
BYDH2_k127_6800538_2 molybdopterin-guanine dinucleotide biosynthesis protein K03753 - - 0.00000000000000000000000000000000000000000000000000003131 205.0
BYDH2_k127_6800538_3 peptidylprolyl isomerase K03770 - 5.2.1.8 0.000000000000000000000000000000000003244 147.0
BYDH2_k127_6804660_0 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K07277 - - 1.04e-244 778.0
BYDH2_k127_6804660_1 zinc metalloprotease K11749 - - 0.0000000000000000000000000000000000000000000003301 170.0
BYDH2_k127_6804660_2 Belongs to the skp family K06142 - - 0.000000000000000000000000000000000000000831 155.0
BYDH2_k127_6804660_3 Catalyzes the N-acylation of UDP-3-O- (hydroxytetradecanoyl)glucosamine using 3-hydroxytetradecanoyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0019637,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.3.1.191 0.00000000000000000000000004479 113.0
BYDH2_k127_6805062_0 TIGRFAM cytochrome c-type biogenesis protein CcmF K02198 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002127 491.0
BYDH2_k127_6805062_1 PFAM Two component regulator propeller - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009022 471.0
BYDH2_k127_6805062_2 Tetratricopeptide repeat K02200 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002078 304.0
BYDH2_k127_6805062_3 oxidoreductase DsbE K02199 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002009 253.0
BYDH2_k127_6805062_4 subunit of a heme lyase K02200 - - 0.000000000000000000000000000000000000002228 152.0
BYDH2_k127_6805062_5 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000000000000148 83.0
BYDH2_k127_6838041_0 Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis K03688 - - 2.052e-219 693.0
BYDH2_k127_6838041_1 Fumarylacetoacetate (FAA) hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001912 346.0
BYDH2_k127_6838041_2 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03214 - - 0.000000000000000000000000000000000000000000001922 173.0
BYDH2_k127_6838041_3 Sterol-binding domain protein K03690 - - 0.0000000002805 62.0
BYDH2_k127_6838041_4 Outer membrane lipoprotein K07285 - - 0.0000000005577 71.0
BYDH2_k127_683869_0 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003356 360.0
BYDH2_k127_683869_1 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001539 349.0
BYDH2_k127_683869_2 response regulator receiver K07684 - - 0.0000000000000000000000000000000001178 134.0
BYDH2_k127_683869_3 Belongs to the MsrB Met sulfoxide reductase family K07305 - 1.8.4.12 0.000000000000000000001298 94.0
BYDH2_k127_6858573_0 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 - 2.6.99.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002176 339.0
BYDH2_k127_6858573_1 Involved in DNA repair and RecF pathway recombination K03584 - - 0.000000000000000000000000000000000000000003459 160.0
BYDH2_k127_6858573_2 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.0000000000000000000000000000000002366 139.0
BYDH2_k127_6858573_3 Phosphotransferase enzyme family K07102 - 2.7.1.221 0.000000000000001089 78.0
BYDH2_k127_6861529_0 DNA segregation ATPase FtsK SpoIIIE K03466 - - 5.352e-259 812.0
BYDH2_k127_6861529_1 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001005 427.0
BYDH2_k127_6861529_2 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) K03634 - - 0.000000000000000000000000000000000000000000000000000000006776 205.0
BYDH2_k127_6861529_3 ABC transporter, phosphonate, periplasmic substrate-binding protein K02044 - - 0.0000000000000000000000000000000000000000000000000000005715 202.0
BYDH2_k127_6861529_4 Uncharacterized protein conserved in bacteria (DUF2059) K09924 - - 0.0000000000000000000001634 103.0
BYDH2_k127_6861529_5 Chemotaxis protein histidine kinase and related - - - 0.0000000007661 72.0
BYDH2_k127_6879378_0 Inositol monophosphatase K01092 - 3.1.3.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008715 389.0
BYDH2_k127_6879378_1 Type II/IV secretion system protein K02670 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002355 359.0
BYDH2_k127_6879378_2 PFAM Rhodanese domain protein K01011 - 2.8.1.1,2.8.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001284 309.0
BYDH2_k127_6879378_3 SpoU rRNA Methylase family K02533,K15396 - 2.1.1.200 0.000000000000000000000000000006577 123.0
BYDH2_k127_6879378_4 Sel1-like repeats. - - - 0.00000005879 59.0
BYDH2_k127_6879378_5 - K09004 - - 0.0005817 44.0
BYDH2_k127_6911721_0 Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress K04083 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001171 325.0
BYDH2_k127_6911721_1 Sigma 54 modulation protein / S30EA ribosomal protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004427 250.0
BYDH2_k127_6911721_2 Thioredoxin domain - - - 0.000000000000000000000000000000007541 133.0
BYDH2_k127_6911721_3 Lytic polysaccharide mono-oxygenase, cellulose-degrading - - - 0.0000000000000000003767 97.0
BYDH2_k127_692189_0 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002712 430.0
BYDH2_k127_692189_1 membrane organization K20543 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003085 364.0
BYDH2_k127_6940493_0 6-phosphogluconolactonase activity - - - 0.00000000000000000000000000000000000000000000000000000000000001247 241.0
BYDH2_k127_6940493_1 CAAX protease self-immunity K07052 - - 0.00000000000000000000000000000000001114 142.0
BYDH2_k127_6940493_2 C-terminal domain of CHU protein family - - - 0.0007467 53.0
BYDH2_k127_6941495_0 SAM-dependent K06969 - 2.1.1.191 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000096 454.0
BYDH2_k127_6941495_1 Mediates influx of magnesium ions K03284 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001264 334.0
BYDH2_k127_6941495_2 Belongs to the peptidase S8 family K14645 - - 0.00000000000000000000000000005202 124.0
BYDH2_k127_695287_0 Heat shock 70 kDa protein K04043 - - 2e-322 996.0
BYDH2_k127_695287_1 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 GO:0006457,GO:0008150,GO:0009987 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001356 565.0
BYDH2_k127_695287_2 May be involved in recombinational repair of damaged DNA K03631 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000388 516.0
BYDH2_k127_695287_3 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001479 393.0
BYDH2_k127_695287_4 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007547 307.0
BYDH2_k127_695287_5 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.000000000000000000000000000000000000000000001237 172.0
BYDH2_k127_695287_6 DsrE/DsrF-like family K09004 - - 0.0000000000000000000000000000000000000002203 154.0
BYDH2_k127_695287_7 - - - - 0.000000000001905 79.0
BYDH2_k127_6958250_0 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 GO:0003674,GO:0003824,GO:0004812,GO:0004824,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006430,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.6 3.5e-256 796.0
BYDH2_k127_6958250_1 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001187 473.0
BYDH2_k127_6958250_2 PFAM Metal-dependent hydrolase HDOD - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000009357 254.0
BYDH2_k127_6958250_3 Belongs to the GcvT family K06980 - - 0.00007344 45.0
BYDH2_k127_696969_0 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype K01624 - 4.1.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004256 599.0
BYDH2_k127_696969_1 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004565 486.0
BYDH2_k127_696969_2 Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S K03149 - 2.8.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000225 445.0
BYDH2_k127_696969_3 Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA K03439 - 2.1.1.33 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001115 289.0
BYDH2_k127_696969_4 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001789 263.0
BYDH2_k127_696969_5 COG2104 Sulfur transfer protein involved in thiamine biosynthesis K03154 - - 0.0000000000000000003202 88.0
BYDH2_k127_696969_6 - - - - 0.00000002786 55.0
BYDH2_k127_6972650_0 Converts GTP to 7,8-dihydroneopterin triphosphate K09007 - 3.5.4.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005642 414.0
BYDH2_k127_6972650_1 6-pyruvoyl tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.000000000000000000000000000000000000000000000000006833 183.0
BYDH2_k127_6972650_2 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 0.00000000000000000000000000000001775 128.0
BYDH2_k127_6972650_3 Aspartyl protease K06985 - - 0.0000000000000167 75.0
BYDH2_k127_6979492_0 Belongs to the mannose-6-phosphate isomerase type 2 family K00971,K16011 - 2.7.7.13,5.3.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005835 578.0
BYDH2_k127_6979492_1 Chain length determinant protein - - - 0.00000000000000000000118 106.0
BYDH2_k127_6979492_2 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 - 2.5.1.6 0.00000000000000001443 82.0
BYDH2_k127_6979492_3 extracellular polysaccharide biosynthetic process K07011 - - 0.000000000000005425 87.0
BYDH2_k127_6996295_0 ABC transporter transmembrane region K06147 - - 1.103e-214 676.0
BYDH2_k127_7004672_0 Belongs to the IlvD Edd family K01687 - 4.2.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001387 557.0
BYDH2_k127_7004672_1 TonB dependent receptor K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001102 559.0
BYDH2_k127_7004672_2 Histidine kinase - - - 0.0002412 49.0
BYDH2_k127_7018449_0 PFAM Glycosyl transferase, group 1 - - - 0.00000000000000000000000000000000000000000000000001323 184.0
BYDH2_k127_7018449_1 polysaccharide export protein K01991 - - 0.0000000000000000000000000000000000000000000002126 175.0
BYDH2_k127_7018449_2 - - - - 0.00000000000007114 78.0
BYDH2_k127_7018449_3 Putative beta-barrel porin 2 - - - 0.000000000002306 76.0
BYDH2_k127_7079321_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 0.0 1303.0
BYDH2_k127_7079321_1 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001861 554.0
BYDH2_k127_7079321_10 Protein of unknown function (DUF721) - - - 0.000000007697 63.0
BYDH2_k127_7079321_2 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 - 2.3.1.1,2.3.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000114 501.0
BYDH2_k127_7079321_3 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K02535 - 3.5.1.108 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003164 482.0
BYDH2_k127_7079321_4 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes K03574 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008413,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017110,GO:0030145,GO:0033554,GO:0034641,GO:0035539,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044715,GO:0044716,GO:0046483,GO:0046872,GO:0046914,GO:0047429,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:1901360 3.6.1.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000508 316.0
BYDH2_k127_7079321_5 Peptidase family M23 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001368 303.0
BYDH2_k127_7079321_6 Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity K18778 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001111 252.0
BYDH2_k127_7079321_7 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 - 2.7.1.24 0.00000000000000000000000000000000000000000000000000000001593 203.0
BYDH2_k127_7079321_8 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 0.000000000000000000000000000000000000000000000000004873 183.0
BYDH2_k127_7079321_9 Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase K09862 - - 0.00000000000000006062 83.0
BYDH2_k127_708348_0 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.00000000000000000000000000000000000000000000000000000000000000000004711 258.0
BYDH2_k127_708348_1 heat shock protein binding - - - 0.0000000000000000000000005166 108.0
BYDH2_k127_708348_2 Outer membrane protease - - - 0.0000112 53.0
BYDH2_k127_7092292_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 - - 2.192e-229 726.0
BYDH2_k127_7092292_1 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004072 569.0
BYDH2_k127_7092292_2 Preprotein translocase, YajC subunit K03210 - - 0.0000000000000000000000000000000005805 134.0
BYDH2_k127_7092292_3 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 GO:0002097,GO:0002099,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016853,GO:0018130,GO:0019438,GO:0034404,GO:0034470,GO:0034641,GO:0034654,GO:0034660,GO:0042455,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0051075,GO:0055086,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.99.17 0.00000000000000000000000000000006093 126.0
BYDH2_k127_7097218_0 ABC-type uncharacterized transport system - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001582 471.0
BYDH2_k127_7097218_1 pfam abc K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000187 398.0
BYDH2_k127_7097218_2 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007355 273.0
BYDH2_k127_7097218_3 PFAM Hydantoinase oxoprolinase K01473 - 3.5.2.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002399 283.0
BYDH2_k127_7097218_4 Protoglobin K13590,K21019 - 2.7.7.65 0.000000000000000000000000000000000000000000000000000000000000000000001162 249.0
BYDH2_k127_7166589_0 COG0491 Zn-dependent hydrolases, including glyoxylases K01069 - 3.1.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004416 316.0
BYDH2_k127_7166589_1 involved in chromosome partitioning K03496 - - 0.00000000000000000000000000003636 122.0
BYDH2_k127_7166589_2 Histidine Phosphotransfer domain - - - 0.0000000000000005264 84.0
BYDH2_k127_720009_0 Beta-Casp domain K07576 - - 7.356e-201 635.0
BYDH2_k127_720009_1 Bacterial protein of unknown function (DUF839) K07093 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002698 582.0
BYDH2_k127_720009_2 COG0226 ABC-type phosphate transport system, periplasmic component K02040 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000317 450.0
BYDH2_k127_720009_3 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003215 261.0
BYDH2_k127_720009_4 PFAM 2Fe-2S iron-sulfur cluster binding domain K00523 - 1.17.1.1 0.000000001274 60.0
BYDH2_k127_7228424_0 Oxidizes proline to glutamate for use as a carbon and nitrogen source K13821 - 1.2.1.88,1.5.5.2 0.0000000000000000000000000000000000000000000000000000000000000007221 222.0
BYDH2_k127_7228424_1 Protein involved in outer membrane biogenesis - - - 0.00000000000000000000000000000000000000000000000000000001605 220.0
BYDH2_k127_7228424_2 Uncharacterized protein conserved in bacteria (DUF2062) - - - 0.0000000000000000000000000000000000000000000003084 173.0
BYDH2_k127_7233725_0 FemAB family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003591 486.0
BYDH2_k127_7233725_1 Glycosyl transferases group 1 K00786 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004387 452.0
BYDH2_k127_7233725_2 polysaccharide deacetylase - - - 0.00000000000000000000000009897 108.0
BYDH2_k127_723757_0 Signal transduction histidine kinase K15011 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002338 347.0
BYDH2_k127_723757_1 PFAM response regulator receiver K15012 - - 0.00000000000000000000000000000000000000000000000000000000000005621 218.0
BYDH2_k127_723757_2 Sel1-like repeats. K07126 - - 0.0000000000000000000000000000000000000000000000004858 183.0
BYDH2_k127_726689_0 Belongs to the aspartokinase family K00928 - 2.7.2.4 6.986e-210 657.0
BYDH2_k127_726689_1 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000133 549.0
BYDH2_k127_726689_2 Could accelerate the degradation of some genes transcripts potentially through selective RNA binding K03563 - - 0.000000000000000000000003942 102.0
BYDH2_k127_726689_3 - - - - 0.000000009335 58.0
BYDH2_k127_726689_4 COG0457 FOG TPR repeat - - - 0.00000001389 62.0
BYDH2_k127_7277098_0 PFAM Response regulator receiver domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001553 311.0
BYDH2_k127_7277098_1 Histidine kinase-like ATPases - - - 0.0000000000000000000000004391 111.0
BYDH2_k127_7277098_2 PFAM Di-haem cytochrome c - - - 0.00000000000000000000128 96.0
BYDH2_k127_7277098_3 PFAM Propeptide PepSY amd peptidase M4 - - - 0.0000000000003813 75.0
BYDH2_k127_7288349_0 haemagglutination activity domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001231 438.0
BYDH2_k127_7289182_0 Ion channel K10716 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001011 308.0
BYDH2_k127_7289182_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000007978 233.0
BYDH2_k127_7289182_2 - - - - 0.000000000000000000000000000000000000000000000001928 177.0
BYDH2_k127_7289182_3 Domain of unkown function (DUF1775) K09796 - - 0.00000000000000000000000000000000000000000001461 170.0
BYDH2_k127_7289182_4 Domain of unknown function DUF302 - - - 0.0000000000000000000000000000000000000000001509 169.0
BYDH2_k127_7306138_0 Belongs to the peptidase M16 family K07263 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004541 569.0
BYDH2_k127_7306138_1 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03110 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001332 453.0
BYDH2_k127_7306138_2 TIGRFAM Cell division ATP-binding protein FtsE K09812 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001667 302.0
BYDH2_k127_7306138_3 Part of the ABC transporter FtsEX involved in cellular division K09811 - - 0.000000000000000000000000000000000000000000000000000000000000001066 230.0
BYDH2_k127_7306138_4 Peptidase M16 K07263 - - 0.0000000000000000000000009674 106.0
BYDH2_k127_7310525_0 signal transduction histidine kinase K07637 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008763 356.0
BYDH2_k127_7310525_1 of a CheY-like receiver domain and a winged-helix DNA-binding domain K07660 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001756 298.0
BYDH2_k127_7310525_10 Protein of unknown function (DUF2934) - - - 0.0000002535 56.0
BYDH2_k127_7310525_11 Predicted methyltransferase regulatory domain - - - 0.0000004965 54.0
BYDH2_k127_7310525_12 rho-dependent transcription termination K19000 - - 0.00000223 53.0
BYDH2_k127_7310525_2 Belongs to the peptidase S11 family K07262 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003049 297.0
BYDH2_k127_7310525_3 Barrel-sandwich domain of CusB or HlyD membrane-fusion K03585 - - 0.000000000000000000000000000000000000000000000000000000009016 207.0
BYDH2_k127_7310525_4 PFAM Histidine triad (HIT) protein K02503 - - 0.000000000000000000000000000000000000000000000000009877 184.0
BYDH2_k127_7310525_5 BON domain - - - 0.00000000000000000000000000000000000000000000000008308 188.0
BYDH2_k127_7310525_6 Protein of unknown function (DUF615) K09889 - - 0.000000000000000000000000000000000000001964 152.0
BYDH2_k127_7310525_7 PFAM cytochrome c, class I K08738 - - 0.00000000000000000000000000005385 120.0
BYDH2_k127_7310525_8 - - - - 0.000000000000000000000000009699 113.0
BYDH2_k127_7310525_9 sequence-specific DNA binding K13280 - 3.4.21.89 0.00000000000000003459 85.0
BYDH2_k127_7341723_0 nuclear chromosome segregation K01153,K13924,K15492 - 2.1.1.80,3.1.1.61,3.1.21.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006891 358.0
BYDH2_k127_7341723_1 PIN domain - - - 0.000000000000000000000000000000000000000000000000000000001719 202.0
BYDH2_k127_7341723_2 SCO1/SenC K07152 - - 0.0000000000000000000000000007078 123.0
BYDH2_k127_7341723_3 Belongs to the DsbB family K03611 - - 0.000000000000000000000001041 109.0
BYDH2_k127_7405934_0 Belongs to the FAD-dependent oxidoreductase 2 family. FRD SDH subfamily K00239 - 1.3.5.1,1.3.5.4 2.19e-300 932.0
BYDH2_k127_7405934_1 COG0479 Succinate dehydrogenase fumarate reductase, Fe-S protein subunit K00240 GO:0000104,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009055,GO:0009060,GO:0009987,GO:0015980,GO:0016020,GO:0016491,GO:0016627,GO:0016999,GO:0017144,GO:0019752,GO:0022900,GO:0022904,GO:0032991,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0045273,GO:0045274,GO:0045281,GO:0045282,GO:0045333,GO:0048037,GO:0051536,GO:0051537,GO:0051538,GO:0051539,GO:0051540,GO:0055114,GO:0070469,GO:0070470,GO:0071704,GO:0071944,GO:0072350,GO:0098796,GO:0098797,GO:0098803,GO:1902494,GO:1990204 1.3.5.1,1.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003355 389.0
BYDH2_k127_7405934_2 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004838 371.0
BYDH2_k127_7405934_3 Belongs to the GcvT family K06980 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001949 348.0
BYDH2_k127_7405934_4 TIGRFAM Succinate dehydrogenase, cytochrome b556 subunit K00241 - - 0.00000000000000000000000006286 111.0
BYDH2_k127_7405934_5 succinate dehydrogenase activity K00242 GO:0000104,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009055,GO:0009060,GO:0009987,GO:0015980,GO:0016020,GO:0016043,GO:0016491,GO:0016627,GO:0016999,GO:0017004,GO:0017144,GO:0019752,GO:0020037,GO:0022607,GO:0022900,GO:0032991,GO:0034622,GO:0043436,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0045273,GO:0045274,GO:0045281,GO:0045282,GO:0045333,GO:0046906,GO:0048037,GO:0055114,GO:0065003,GO:0070469,GO:0070470,GO:0071704,GO:0071840,GO:0071944,GO:0072350,GO:0097159,GO:0098796,GO:0098797,GO:0098803,GO:1901363,GO:1902494,GO:1990204 - 0.0000000000000000004133 91.0
BYDH2_k127_7405934_6 An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH K09159 GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0006105,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016043,GO:0016999,GO:0017013,GO:0017144,GO:0018065,GO:0018293,GO:0019538,GO:0019752,GO:0022607,GO:0034552,GO:0034622,GO:0036211,GO:0043170,GO:0043412,GO:0043436,GO:0043648,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044281,GO:0045333,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:0072350,GO:1901564 - 0.0000000000001346 75.0
BYDH2_k127_7405934_7 - K19168 - - 0.0000000001685 68.0
BYDH2_k127_7422365_0 Gliding motility protein GldG - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001585 558.0
BYDH2_k127_7422365_1 ATPases associated with a variety of cellular activities K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001378 369.0
BYDH2_k127_7422365_2 COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001089 354.0
BYDH2_k127_7422365_3 PFAM Phosphoglycerate mutase K02226 - 3.1.3.73 0.00000000000000000000000000000000000000000000000000000009625 198.0
BYDH2_k127_7422365_4 Domain of unknown function (DUF4340) - - - 0.00000000000000007561 93.0
BYDH2_k127_7439399_0 Evidence 4 Homologs of previously reported genes of - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005298 413.0
BYDH2_k127_7439399_1 - - - - 0.00000000000000000000005465 106.0
BYDH2_k127_7439399_2 - - - - 0.000000000000000000003651 93.0
BYDH2_k127_7439544_0 Belongs to the citrate synthase family K01647 - 2.3.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001048 555.0
BYDH2_k127_7439544_1 membrane protein, TerC - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003187 317.0
BYDH2_k127_7439544_2 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.000000000000000000000000000000000000000000000000001284 185.0
BYDH2_k127_7449011_0 HD domain K07814 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000125 475.0
BYDH2_k127_7449011_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004219 468.0
BYDH2_k127_7449011_2 Outer membrane protein beta-barrel family K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000218 435.0
BYDH2_k127_7449011_3 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007 - 2.7.9.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003587 280.0
BYDH2_k127_7449011_4 GAF domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003656 244.0
BYDH2_k127_7449011_5 Response regulator receiver - - - 0.000000000000000000000000000000000000000000000000000992 186.0
BYDH2_k127_7449011_6 cheY-homologous receiver domain - - - 0.00000000000000000000000000000000000000000001048 172.0
BYDH2_k127_7449011_7 Domain of unknown function (DUF4154) - - - 0.00000000000004919 81.0
BYDH2_k127_7449011_8 - - - - 0.0000000001685 68.0
BYDH2_k127_7456092_0 Membrane - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000009036 232.0
BYDH2_k127_7456092_1 Transcriptional regulator - - - 0.00000000000000000000000000000009151 127.0
BYDH2_k127_7456092_2 - - - - 0.000000000000000000000002829 108.0
BYDH2_k127_7486945_0 Type II secretion system (T2SS), protein F K02653 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001685 455.0
BYDH2_k127_7486945_1 type II secretion system protein E K02454,K02652,K12276 - - 0.00000000000000000000000000000000000000000000000000000000000000000445 228.0
BYDH2_k127_7486945_2 - - - - 0.00000000000000000000002959 106.0
BYDH2_k127_7509617_0 PFAM peptidase M3A and M3B, thimet oligopeptidase F K01414 - 3.4.24.70 1.967e-307 955.0
BYDH2_k127_7509617_1 A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001349 448.0
BYDH2_k127_7509617_2 Exodeoxyribonuclease III xth K01142 - 3.1.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001237 343.0
BYDH2_k127_7509617_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003673 295.0
BYDH2_k127_7509617_4 G T U mismatch-specific DNA glycosylase - - - 0.000000000000000000000000000000000000000000000000000001396 198.0
BYDH2_k127_7509617_5 Dehydrogenase E1 component K00164 - 1.2.4.2 0.0000000002467 64.0
BYDH2_k127_7569424_0 5'-nucleotidase, C-terminal domain K01119 - 3.1.3.6,3.1.4.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003291 350.0
BYDH2_k127_7589174_0 pyrroloquinoline quinone binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002876 547.0
BYDH2_k127_7589174_1 Cytochrome c K19713 - 1.8.2.2 0.0000000000000000000000000000000000001516 146.0
BYDH2_k127_7589174_2 Belongs to the peptidase S8 family K01361,K08652,K14647 - 3.4.21.110,3.4.21.96 0.00000000002171 76.0
BYDH2_k127_7675674_0 mechanosensitive ion channel K16052 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006676 346.0
BYDH2_k127_7675674_1 Psort location CytoplasmicMembrane, score - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002765 325.0
BYDH2_k127_7675674_2 Removes the phosphate from trehalose 6-phosphate to produce free trehalose K01087 - 3.1.3.12 0.000000000000000000000000000000000000000000000000000000009776 207.0
BYDH2_k127_7675674_3 Sodium/hydrogen exchanger family - - - 0.0000000000000000000000000000000000000000000000000000001653 198.0
BYDH2_k127_7688628_0 Molecular chaperone. Has ATPase activity K04079 - - 1.862e-240 752.0
BYDH2_k127_7688628_1 GGDEF domain containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007927 443.0
BYDH2_k127_7688628_2 Rhodanese Homology Domain - - - 0.0000000000000000000000004234 111.0
BYDH2_k127_7688628_3 EXOIII K02342 - 2.7.7.7 0.00007062 45.0
BYDH2_k127_7689357_0 Reutilizes the intact tripeptide L-alanyl-gamma-D- glutamyl-meso-diaminopimelate by linking it to UDP-N- acetylmuramate K02558 - 6.3.2.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001101 428.0
BYDH2_k127_7689357_1 Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides K03684 - 3.1.13.5 0.000000000000000002955 85.0
BYDH2_k127_7689357_2 - - - - 0.0000000009765 68.0
BYDH2_k127_7694328_0 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002852 533.0
BYDH2_k127_7694328_1 - - - - 0.000000000000000000000000000000000000000000000001049 176.0
BYDH2_k127_7694328_2 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases - - - 0.0000000000000000000000000000000000000000000244 178.0
BYDH2_k127_7718561_0 domain protein - - - 0.0000000000000003716 89.0
BYDH2_k127_7765447_0 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003656 335.0
BYDH2_k127_7765447_1 COG4992 Ornithine acetylornithine aminotransferase K00821 - 2.6.1.11,2.6.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008222 329.0
BYDH2_k127_7765447_2 Hydantoinase B/oxoprolinase K01474 - 3.5.2.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004098 292.0
BYDH2_k127_7771385_0 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002029 516.0
BYDH2_k127_7771385_1 PFAM FAD dependent oxidoreductase K00111 - 1.1.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005305 457.0
BYDH2_k127_7771385_2 Dienelactone hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001502 327.0
BYDH2_k127_7771385_3 DMSO reductase anchor subunit (DmsC) K21309 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002161 324.0
BYDH2_k127_7771385_4 2OG-Fe(II) oxygenase - - - 0.00000000000000000000000000000000000000000000000000000000005995 210.0
BYDH2_k127_7771385_5 PFAM Glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.0000000000000000000000000000000006604 136.0
BYDH2_k127_7771385_6 Rieske [2Fe-2S] domain K05710 - - 0.000000000000000003133 88.0
BYDH2_k127_779234_0 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005873 502.0
BYDH2_k127_779234_1 riboflavin synthase, alpha subunit K00793 - 2.5.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000002577 251.0
BYDH2_k127_779234_2 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 - 2.5.1.78 0.0000000000000000000000000000000000000000000000000007546 187.0
BYDH2_k127_779234_3 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.000000000000000000000000000000000000000000003829 168.0
BYDH2_k127_779234_4 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006353,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0018130,GO:0019438,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:1901360,GO:1901362,GO:1901576 - 0.00000000000000000000000000000000000000000002985 165.0
BYDH2_k127_779234_5 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0006725,GO:0006732,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009030,GO:0009058,GO:0009108,GO:0009110,GO:0009228,GO:0009229,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0017076,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0035639,GO:0036094,GO:0042357,GO:0042364,GO:0042723,GO:0042724,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046483,GO:0046872,GO:0051186,GO:0051188,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.7.4.16 0.0000000000000000000000000000000006199 135.0
BYDH2_k127_7803630_0 major facilitator superfamily K05820 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004244 443.0
BYDH2_k127_7803630_1 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005081 316.0
BYDH2_k127_7803630_2 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 GO:0000166,GO:0003674,GO:0003824,GO:0004107,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009423,GO:0009987,GO:0010181,GO:0016053,GO:0016829,GO:0016835,GO:0016838,GO:0019438,GO:0019752,GO:0032553,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050662,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 4.2.3.5 0.000000000000000000000000000000000000000000000000000000000000000000007131 235.0
BYDH2_k127_7803630_3 LemA Family K03744 - - 0.0000000000000000000000000009088 114.0
BYDH2_k127_7804124_0 AAA ATPase, central domain protein K07478 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002459 380.0
BYDH2_k127_7804124_1 - - - - 0.00000000000000000000000000000000000000000000000000007421 195.0
BYDH2_k127_7819476_0 Protein conserved in bacteria K09922 - - 0.000000000000000000000000000000000000000000000000000000002262 201.0
BYDH2_k127_7819476_1 PFAM Transposase IS200 like - - - 0.00000000000000000000000000000000000000000000000000009467 201.0
BYDH2_k127_7819476_2 DAHP synthetase I family K03856 - 2.5.1.54 0.00000000000000000000000000000000000000000000002177 171.0
BYDH2_k127_7819476_3 Cyclic nucleotide-monophosphate binding domain - - - 0.00000000000000000000000000000000002258 138.0
BYDH2_k127_7819476_4 TfoX N-terminal domain K07343 - - 0.000000000000000000000000001257 115.0
BYDH2_k127_7819476_5 Protein of unknown function (DUF2892) - - - 0.0000000000000000004368 90.0
BYDH2_k127_7819476_6 DnaJ-class molecular chaperone - - - 0.00000000000002277 80.0
BYDH2_k127_782812_0 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02621 GO:0000819,GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006259,GO:0006265,GO:0006276,GO:0006725,GO:0006807,GO:0006996,GO:0007049,GO:0007059,GO:0007062,GO:0008150,GO:0008152,GO:0009330,GO:0009987,GO:0016020,GO:0016043,GO:0019897,GO:0019898,GO:0022402,GO:0030541,GO:0032991,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0046483,GO:0051276,GO:0071103,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0097159,GO:0098813,GO:1901360,GO:1901363 - 0.00000000000000000000000000000000000000000000000001915 184.0
BYDH2_k127_7856585_0 Methyl-transferase K06983 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008541 416.0
BYDH2_k127_7856585_1 Lipocalin-like domain K03098 - - 0.000000000000000000000000000000000000000000000000000000000002209 213.0
BYDH2_k127_7856585_2 - - - - 0.00000000000000007637 82.0
BYDH2_k127_7856585_3 Uncharacterised protein family (UPF0149) K07039 - - 0.00000009445 53.0
BYDH2_k127_7856585_4 nuclease activity - - - 0.00003134 48.0
BYDH2_k127_7917866_0 Beta propeller domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005475 277.0
BYDH2_k127_7917866_1 COG0790 FOG TPR repeat, SEL1 subfamily K07126 - - 0.0000000000000000000009198 102.0
BYDH2_k127_7919074_0 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01581,K01586 - 4.1.1.17,4.1.1.20 5.043e-209 659.0
BYDH2_k127_7919074_1 peptidase - - - 0.00000000000000000000000000000000001205 142.0
BYDH2_k127_7919074_2 ATP-grasp domain - - - 0.00000000000000000000000000001374 120.0
BYDH2_k127_7924022_0 Cytochrome c554 and c-prime - - - 0.00000000000000000000000000000000000000000339 166.0
BYDH2_k127_7924022_1 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000001222 141.0
BYDH2_k127_7924022_2 Cytochrome c7 and related cytochrome c - - - 0.000000000000000000000000000000000219 138.0
BYDH2_k127_7924022_3 Thioredoxin-like - - - 0.0000000000000000000000475 105.0
BYDH2_k127_7926993_0 Domain of unknown function (DUF1839) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001793 432.0
BYDH2_k127_7926993_1 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001805 413.0
BYDH2_k127_7926993_2 acyl-CoA dehydrogenase activity K00249 - 1.3.8.7 0.00000000000000000000000000000000000000000000000000000000001066 209.0
BYDH2_k127_7948080_0 Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate K01465 - 3.5.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001069 481.0
BYDH2_k127_7948080_1 Asparagine synthase, glutamine-hydrolyzing K01953 - 6.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001104 427.0
BYDH2_k127_7948080_2 Trims short 3' overhangs of a variety of RNA species, leaving a one or two nucleotide 3' overhang. Responsible for the end-turnover of tRNA specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A). Also appears to be involved in tRNA biosynthesis K03683 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001069 279.0
BYDH2_k127_7948080_3 TraB family K09973 - - 0.000000000000000000000000000000000000000000000000000000000001794 222.0
BYDH2_k127_7948080_4 Belongs to the glutaredoxin family. Monothiol subfamily K07390 - - 0.0000000000000000000000000000000000000000000003402 169.0
BYDH2_k127_7948080_5 Asparagine synthase, glutamine-hydrolyzing K01953 - 6.3.5.4 0.0000000000000002815 78.0
BYDH2_k127_7949904_0 C-methyltransferase C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000652 612.0
BYDH2_k127_7949904_1 NAD dependent epimerase/dehydratase family K19180 - 1.1.1.339 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002845 381.0
BYDH2_k127_7949904_2 C-methyltransferase C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000005578 229.0
BYDH2_k127_7986182_0 PAS fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002358 310.0
BYDH2_k127_7986182_1 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.000000000000000000000000000001167 138.0
BYDH2_k127_7986182_2 - - - - 0.000000000000000007649 89.0
BYDH2_k127_7986182_3 SUPERFAMILY SSF53098, Polynucleotidyl transferase, Ribonuclease H fold - - - 0.000000000000005088 79.0
BYDH2_k127_8005425_0 5'-nucleotidase, C-terminal domain K01119 - 3.1.3.6,3.1.4.16 3.55e-204 654.0
BYDH2_k127_8005425_1 Domain of unknown function (DUF4188) - - - 0.0000000000000000000000000000000000000000000000000000000005154 205.0
BYDH2_k127_8005425_2 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.000000000000000000000000000000000000000000000003466 176.0
BYDH2_k127_8062657_0 Nicotinate phosphoribosyltransferase (NAPRTase) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001494 589.0
BYDH2_k127_8062657_1 DNA polymerase X family K02347 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001317 340.0
BYDH2_k127_8062657_2 Cytochrome C biogenesis protein - - - 0.000000000000000009701 88.0
BYDH2_k127_8062971_0 HupE / UreJ protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001901 351.0
BYDH2_k127_8062971_1 Belongs to the P(II) protein family K04751,K04752 - - 0.0000000000000000000000000000143 120.0
BYDH2_k127_8062971_2 Transporter associated domain K03699 - - 0.000000000000000000000000001309 120.0
BYDH2_k127_8062971_3 Transporter associated domain K03699 - - 0.000000000000000000007719 95.0
BYDH2_k127_8065376_0 Putative diguanylate phosphodiesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008494 350.0
BYDH2_k127_8065376_1 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. RlmM subfamily K06968 - 2.1.1.186 0.0000000000000000000000006194 109.0
BYDH2_k127_8065563_0 Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA K03215 - 2.1.1.190 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001536 456.0
BYDH2_k127_8065563_1 Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily K01834 - 5.4.2.11 0.0000000000000000000000000000000008708 132.0
BYDH2_k127_8094077_0 TIGRFAM Acetolactate synthase, large subunit, biosynthetic K01652 - 2.2.1.6 2.187e-283 875.0
BYDH2_k127_8094077_1 COG0440 Acetolactate synthase, small (regulatory) subunit K01653 GO:0003674,GO:0003824,GO:0003984,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005948,GO:0006082,GO:0006520,GO:0006549,GO:0006573,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009097,GO:0009099,GO:0009987,GO:0016053,GO:0016740,GO:0016744,GO:0019752,GO:0032991,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494,GO:1990234 2.2.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000002232 250.0
BYDH2_k127_8094077_2 Protein involved in meta-pathway of phenol degradation - - - 0.00000000000000000000000000000000000000000000000000000001455 212.0
BYDH2_k127_8094077_3 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 0.000000000000000434 81.0
BYDH2_k127_8103701_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K01139 - 2.7.6.5,3.1.7.2 9.976e-300 936.0
BYDH2_k127_8103701_1 PFAM YicC-like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002175 299.0
BYDH2_k127_8103701_2 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 GO:0003674,GO:0003678,GO:0003724,GO:0003824,GO:0004003,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006807,GO:0006996,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0008186,GO:0009314,GO:0009379,GO:0009628,GO:0009987,GO:0010501,GO:0016043,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032392,GO:0032508,GO:0032991,GO:0033202,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048476,GO:0050896,GO:0051276,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:0140098,GO:1901360,GO:1902494 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000008968 258.0
BYDH2_k127_8103701_3 Essential for recycling GMP and indirectly, cGMP K00942 - 2.7.4.8 0.000000000000000000000000000000000000000000000000000000000000000000000000167 253.0
BYDH2_k127_8103701_4 endoribonuclease L-PSP - - - 0.0000000000000000000000000000000000000000000000000003992 188.0
BYDH2_k127_8103701_5 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 - 2.7.7.6 0.00000000000000000000001325 103.0
BYDH2_k127_8103701_6 Bacterial extracellular solute-binding proteins, family 3 K02030 - - 0.0000000000000009286 83.0
BYDH2_k127_8106568_0 Protein of unknown function (DUF3365) - - - 0.000000000000000000000000000000000000000000000001831 184.0
BYDH2_k127_8106568_1 Histidine kinase - - - 0.0000000000000000000000002159 106.0
BYDH2_k127_8133509_0 Peptidase family M28 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002956 490.0
BYDH2_k127_8166071_0 Belongs to the 5'-nucleotidase family K01119 - 3.1.3.6,3.1.4.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001823 377.0
BYDH2_k127_8177343_0 Catalyzes the sequential condensation of isopentenyl diphosphate (IPP) with (2E,6E)-farnesyl diphosphate (E,E-FPP) to yield (2Z,6Z,10Z,14Z,18Z,22Z,26Z,30Z,34E,38E)-undecaprenyl diphosphate (di-trans,octa-cis-UPP). UPP is the precursor of glycosyl carrier lipid in the biosynthesis of bacterial cell wall polysaccharide components such as peptidoglycan and lipopolysaccharide K00806 - 2.5.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005238 289.0
BYDH2_k127_8177343_1 Belongs to the CDS family K00981 - 2.7.7.41 0.000000000000000000000000000000000000000000000000000000167 209.0
BYDH2_k127_8177343_2 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006721,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016114,GO:0016491,GO:0016614,GO:0016616,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0030145,GO:0030604,GO:0032787,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046490,GO:0046872,GO:0046914,GO:0048037,GO:0050661,GO:0050662,GO:0051483,GO:0051484,GO:0055114,GO:0070402,GO:0071704,GO:0090407,GO:0097159,GO:1901135,GO:1901265,GO:1901363,GO:1901576 1.1.1.267 0.00000000001849 66.0
BYDH2_k127_8200150_0 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000271 492.0
BYDH2_k127_8200150_1 type VI secretion protein K11900 - - 0.00000000000000000000000000007646 130.0
BYDH2_k127_8222358_0 Ammonium transporter K03320,K06580 - - 3.372e-209 655.0
BYDH2_k127_8222358_1 nucleotide catabolic process - - - 0.00000000000000000000000000000000000000000000000000000002773 214.0
BYDH2_k127_8222358_2 COG0790 FOG TPR repeat, SEL1 subfamily K07126 - - 0.00000000000000000000000000000000005287 139.0
BYDH2_k127_823290_0 Predicted methyltransferase regulatory domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002703 409.0
BYDH2_k127_823290_1 tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000006148 182.0
BYDH2_k127_8271992_0 Major facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002299 468.0
BYDH2_k127_8271992_1 Glutaredoxin - - - 0.0000000000000000000004112 98.0
BYDH2_k127_8271992_2 Belongs to the citrate synthase family K01647 - 2.3.3.1 0.0000000000000000001648 89.0
BYDH2_k127_8278704_0 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 5.74e-213 667.0
BYDH2_k127_8278704_1 Belongs to the glycosyl hydrolase 57 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008553 310.0
BYDH2_k127_8278704_2 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 0.000000000000000000000000000000000000000000007684 167.0
BYDH2_k127_8279719_0 Dynamin family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001453 583.0
BYDH2_k127_8279719_1 IMG reference gene - - - 0.0000000001294 73.0
BYDH2_k127_8279719_2 Belongs to the UPF0235 family K09131 - - 0.00000000013 63.0
BYDH2_k127_8310980_0 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 - 1.1.1.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002055 347.0
BYDH2_k127_8310980_1 Bacterial transferase hexapeptide (six repeats) - - - 0.0000000000000000000000000000000000000000000000000000000000000000001215 234.0
BYDH2_k127_8310980_2 - - - - 0.000000000000000000000000000000000000000004975 155.0
BYDH2_k127_8336452_0 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001239 421.0
BYDH2_k127_8336452_1 Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity K00765 - 2.4.2.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002516 304.0
BYDH2_k127_8336452_2 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 - 1.1.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004972 272.0
BYDH2_k127_8339699_0 COG0542 ATPases with chaperone activity, ATP-binding subunit K11907 - - 2.097e-231 728.0
BYDH2_k127_8350017_0 Two component signalling adaptor domain K03415 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003687 361.0
BYDH2_k127_8350017_1 Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP K00575 - 2.1.1.80 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005226 304.0
BYDH2_k127_8350017_2 Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P-ring assembly K02386 - - 0.00000000000000007471 87.0
BYDH2_k127_8383808_0 Protein of unknown function (DUF3570) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000182 310.0
BYDH2_k127_8383808_1 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.000000000000000000000000000000000000000000000000000000000000000000009067 239.0
BYDH2_k127_8401094_0 PLD-like domain K06131 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003082 388.0
BYDH2_k127_8401094_1 PFAM ApaG domain protein K06195 - - 0.00000000000000000000000000000000000000000000000005736 181.0
BYDH2_k127_846149_0 PFAM ABC transporter K02003 - - 0.000000000000000000000000000000000000000000005833 169.0
BYDH2_k127_846149_1 Barrel-sandwich domain of CusB or HlyD membrane-fusion - - - 0.00000000000000000003387 105.0
BYDH2_k127_8465395_0 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 1.085e-302 945.0
BYDH2_k127_8465395_1 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 GO:0003674,GO:0003824,GO:0004019,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0015949,GO:0016874,GO:0016879,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033554,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046033,GO:0046040,GO:0046085,GO:0046086,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0050896,GO:0051716,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.4.4 1.076e-212 667.0
BYDH2_k127_8465395_2 Specifically methylates the ribose of guanosine 2251 in 23S rRNA K03218 - 2.1.1.185 0.000000000000000000000000000000000000000000000000000044 194.0
BYDH2_k127_8465395_3 Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine K02502 - - 0.00000000000000000000000000000000000000000000000001082 185.0
BYDH2_k127_8465645_0 Acyl-CoA dehydrogenase, N-terminal domain K06445 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003307 424.0
BYDH2_k127_8465645_1 Belongs to the thiolase family K00626 - 2.3.1.9 0.00000000000000000000000000000000000000000000003903 171.0
BYDH2_k127_8475773_0 major facilitator superfamily - GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008150,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000001027 256.0
BYDH2_k127_8475773_1 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.00000000000000000000000000000000000000000000000000000000000001128 218.0
BYDH2_k127_8475773_2 Ankyrin repeats (many copies) - - - 0.000000000000000000000000004557 118.0
BYDH2_k127_853649_0 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02622 - - 0.0 1040.0
BYDH2_k127_853649_1 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02621 - - 1.074e-293 910.0
BYDH2_k127_853649_2 Cysteine-rich domain - - - 4.673e-230 719.0
BYDH2_k127_853649_3 Rubrerythrin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002426 263.0
BYDH2_k127_853649_4 Protein of unknown function (DUF3501) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002976 264.0
BYDH2_k127_853649_5 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K09699 - 2.3.1.168 0.0003703 43.0
BYDH2_k127_8539412_0 Belongs to the FPP GGPP synthase family K02523 - 2.5.1.90 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005009 424.0
BYDH2_k127_8539412_1 This protein binds to 23S rRNA in the presence of protein L20 K02888 GO:0003674,GO:0003735,GO:0005198 - 0.000000000000000000000000000000000000005326 149.0
BYDH2_k127_8539412_2 Belongs to the bacterial ribosomal protein bL27 family K02899 GO:0000027,GO:0001558,GO:0003674,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040008,GO:0042254,GO:0042255,GO:0042256,GO:0042273,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0044877,GO:0048518,GO:0050789,GO:0050794,GO:0051128,GO:0065003,GO:0065007,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090069,GO:0090070,GO:1901564,GO:1901566,GO:1901576,GO:1902626,GO:1990904 - 0.00000000000000000000000000000000004616 135.0
BYDH2_k127_8539412_3 - - - - 0.00003024 47.0
BYDH2_k127_8592739_0 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) K00991 - 2.7.7.60 0.00000000000000000000000000000000000000000000000000000000000000000000000000003931 263.0
BYDH2_k127_8592739_1 Responsible for synthesis of pseudouridine from uracil- 13 in transfer RNAs K06176 - 5.4.99.27 0.00000000000000000000000000000000000000000000000000000000000000005655 229.0
BYDH2_k127_8592739_2 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0008150,GO:0008152,GO:0008270,GO:0008685,GO:0009058,GO:0009108,GO:0009987,GO:0016829,GO:0016849,GO:0030145,GO:0042180,GO:0042181,GO:0042802,GO:0043167,GO:0043169,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:1901576,GO:1901661,GO:1901663 4.6.1.12 0.0000000000000000000000000000000000000000000000000000000000000001032 226.0
BYDH2_k127_8599802_0 UPF0056 membrane protein K05595 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000008059 248.0
BYDH2_k127_8599802_1 Belongs to the UPF0178 family K09768 - - 0.000000000000000000000000000000000000000000000000000000000000000004631 228.0
BYDH2_k127_8603108_0 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003167 335.0
BYDH2_k127_8603108_1 His Kinase A (phospho-acceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001277 336.0
BYDH2_k127_8603108_2 TIGRFAM phosphonate ABC transporter, periplasmic phosphonate-binding protein K02044 - - 0.000000000000000000000000000000000000000000000000000000000000000007614 236.0
BYDH2_k127_8603108_3 response regulator K02485 - - 0.00000000000000000000000000000000000000000000000000000000006172 207.0
BYDH2_k127_8603108_4 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.000000000000000000000000000000000000000000000000000001646 197.0
BYDH2_k127_8603108_5 Belongs to the bacterial ribosomal protein bS16 family K02959 GO:0000028,GO:0000217,GO:0000400,GO:0003674,GO:0003676,GO:0003677,GO:0003735,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006259,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0016787,GO:0016788,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0090305,GO:0097159,GO:0140097,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000938 128.0
BYDH2_k127_8603108_6 cheY-homologous receiver domain - - - 0.0000000000000000000000000008109 117.0
BYDH2_k127_8603108_7 COG3221 ABC-type phosphate phosphonate transport system, periplasmic component K02044 - - 0.000000000000000000009533 97.0
BYDH2_k127_8603108_8 Belongs to the RNA methyltransferase TrmD family K00554 GO:0000287,GO:0001510,GO:0002939,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042802,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0050518,GO:0052906,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.228 0.00000005122 56.0
BYDH2_k127_8620523_0 Concanavalin A-like lectin/glucanases superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001039 406.0
BYDH2_k127_8620523_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002119 266.0
BYDH2_k127_8620523_2 - - - - 0.000000000000000000000000000000000000000000000000000000001556 207.0
BYDH2_k127_8629320_0 Histidine kinase-, DNA gyrase B-, and HSP90-like - - - 0.0000000000000000000000000000003597 133.0
BYDH2_k127_8629320_1 peptidase activity, acting on L-amino acid peptides K01337,K01400,K20276 - 3.4.21.50,3.4.24.28 0.00000000000000000000000003573 118.0
BYDH2_k127_8629320_2 amine dehydrogenase activity K01406,K01448,K13735,K20276,K21449 - 3.4.24.40,3.5.1.28 0.00000000000485 76.0
BYDH2_k127_8687818_0 TIGRFAM Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004989 415.0
BYDH2_k127_8687818_1 COG0784 FOG CheY-like receiver - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006496 383.0
BYDH2_k127_8687818_2 - - - - 0.000000000000000004397 86.0
BYDH2_k127_8687818_3 TamB, inner membrane protein subunit of TAM complex K09800 - - 0.0007844 42.0
BYDH2_k127_8707503_0 PFAM binding-protein-dependent transport systems inner membrane component K02037 - - 8.682e-206 658.0
BYDH2_k127_8707503_1 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006012 447.0
BYDH2_k127_8731349_0 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000543 540.0
BYDH2_k127_8731349_1 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003479 509.0
BYDH2_k127_8731349_2 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002775 506.0
BYDH2_k127_8731349_3 Tetratricopeptide TPR_2 repeat protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004983 379.0
BYDH2_k127_8731349_4 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 - 2.7.1.148 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000982 332.0
BYDH2_k127_8731349_5 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 - - 0.000000000000000000000000000000000000000000000000000000000008997 214.0
BYDH2_k127_8731349_6 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 - 2.1.1.297 0.0000000000000000000000000000000000000007663 151.0
BYDH2_k127_8731349_7 Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein K02494 GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0006807,GO:0008104,GO:0008150,GO:0008152,GO:0008289,GO:0009279,GO:0010876,GO:0016020,GO:0019538,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0033036,GO:0033218,GO:0034613,GO:0042157,GO:0042277,GO:0043170,GO:0044238,GO:0044462,GO:0044464,GO:0044872,GO:0044873,GO:0044874,GO:0051179,GO:0051641,GO:0051668,GO:0070727,GO:0071704,GO:0071723,GO:0071944,GO:0072657,GO:1901564 - 0.00000000000000000000000000000000003886 147.0
BYDH2_k127_8736801_0 ABC transporter transmembrane region K18889 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001329 570.0
BYDH2_k127_8736801_1 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length K04760 - - 0.0000000000000000000000000000000000000000000000000000000000001836 223.0
BYDH2_k127_8736801_2 - - - - 0.0000000000000000000001036 101.0
BYDH2_k127_8797897_0 TIGRFAM phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 - 5.3.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001058 396.0
BYDH2_k127_8797897_1 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007052 321.0
BYDH2_k127_8797897_2 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004605 292.0
BYDH2_k127_8797897_3 COG0131 Imidazoleglycerol-phosphate dehydratase K01089,K01693 GO:0000105,GO:0003674,GO:0003824,GO:0004401,GO:0004424,GO:0005488,GO:0005515,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042578,GO:0042802,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 3.1.3.15,4.2.1.19 0.00000000000000000000000000000002966 125.0
BYDH2_k127_8797897_4 imidazoleglycerol-phosphate dehydratase K01693 - 4.2.1.19 0.000000000005603 65.0
BYDH2_k127_8804004_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.0 1044.0
BYDH2_k127_8804004_1 PFAM aminotransferase, class I - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009412 369.0
BYDH2_k127_8804004_2 TIGRFAM HAD-superfamily hydrolase, subfamily IA, variant 3 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003097 355.0
BYDH2_k127_8804004_3 Belongs to the MEMO1 family K06990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003784 350.0
BYDH2_k127_8804004_4 pfam ammecr1 - - - 0.000000000000000000000000000000000000000000000000000000000000001399 227.0
BYDH2_k127_8804004_5 Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters. Also required for regulation of fis expression K06204 - - 0.00000000000000000000000000000000000000000000000000000000001754 213.0
BYDH2_k127_8804004_6 Pentapeptide repeats (8 copies) - - - 0.00000000000000000000000001645 117.0
BYDH2_k127_880591_0 Type II/IV secretion system protein K02670 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002641 483.0
BYDH2_k127_880591_1 Oxidoreductase FAD-binding domain K02823 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001577 357.0
BYDH2_k127_880591_2 Tfp pilus assembly protein, pilus retraction ATPase PilT K02669 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001653 285.0
BYDH2_k127_8823689_0 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001974 459.0
BYDH2_k127_8823689_1 (ABC) transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000137 295.0
BYDH2_k127_8823689_2 Binds the second messenger bis-(3'-5') cyclic dimeric guanosine monophosphate (c-di-GMP). Can bind two c-di-GMP molecules per monomer. May play a role in bacterial second- messenger regulated processes. Binding to c-di-GMP induces a conformational change of the C- and N-termini resulting in the exposure of a highly negative surface on one side of the protein to a - - - 0.000000000000000000000000000001095 126.0
BYDH2_k127_8852069_0 it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins K02314 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001407 441.0
BYDH2_k127_8852069_1 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001505 397.0
BYDH2_k127_8852069_2 Binds to the 23S rRNA K02939 - - 0.0000000000000000000000000000000000000000000000000000004072 196.0
BYDH2_k127_8852069_3 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. RlmB subfamily K03218 GO:0000154,GO:0000451,GO:0000453,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070039,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.185 0.000000000000000000000000000000000000000000000000000001122 194.0
BYDH2_k127_8852069_4 membrane - - - 0.0000000000000000000000000000000000000000000000002136 188.0
BYDH2_k127_8852069_5 Binds together with S18 to 16S ribosomal RNA K02990 - - 0.0000000000000000000000000000000000000000000004843 173.0
BYDH2_k127_8852069_6 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0019843,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0048027,GO:0070181,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000006005 126.0
BYDH2_k127_8872896_0 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009360,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030234,GO:0030337,GO:0032991,GO:0034641,GO:0034645,GO:0042575,GO:0042802,GO:0043170,GO:0043846,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050790,GO:0061695,GO:0065007,GO:0065009,GO:0071704,GO:0090304,GO:0098772,GO:1901360,GO:1901576,GO:1902494,GO:1990234 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001677 550.0
BYDH2_k127_8872896_1 MotA/TolQ/ExbB proton channel family K02556 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004231 336.0
BYDH2_k127_8872896_2 Flagellar motor protein K02557 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002949 293.0
BYDH2_k127_8872896_3 P-aminobenzoate N-oxygenase AurF - - - 0.0000000000000000000000000000000000000000000000000000000000000000006727 239.0
BYDH2_k127_8872896_4 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.0000000000000000000000000000000000000002566 151.0
BYDH2_k127_8872896_6 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 GO:0000731,GO:0006139,GO:0006259,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009987,GO:0018130,GO:0019438,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:1901360,GO:1901362,GO:1901576 - 0.0000001925 59.0
BYDH2_k127_8890013_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 4.342e-222 693.0
BYDH2_k127_8890013_1 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001436 327.0
BYDH2_k127_8890013_2 Modulates RecA activity K03565 - - 0.0000000000000000000000000003017 120.0
BYDH2_k127_8911726_0 Extracellular solute-binding protein - - - 0.0 1023.0
BYDH2_k127_8911726_1 PFAM binding-protein-dependent transport systems inner membrane component K02034 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004331 593.0
BYDH2_k127_8911726_2 Oligopeptide transport system permease protein OppB K02033 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005218 515.0
BYDH2_k127_8911726_3 Carboxypeptidase regulatory-like domain K14475 - - 0.00000000000000000000000000000000000003813 164.0
BYDH2_k127_8911726_4 Multicopper oxidase - - - 0.000000000000000000000000000000000005195 149.0
BYDH2_k127_8911726_5 Multicopper oxidase - - - 0.00000000000000000000000002085 126.0
BYDH2_k127_8928077_0 cytochrome c peroxidase K00428 - 1.11.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000004897 250.0
BYDH2_k127_8928077_1 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 GO:0003674,GO:0003678,GO:0003824,GO:0004003,GO:0004386,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006268,GO:0006270,GO:0006276,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009628,GO:0009987,GO:0010212,GO:0010332,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032392,GO:0032508,GO:0033554,GO:0034641,GO:0034645,GO:0042221,GO:0042623,GO:0043138,GO:0043140,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0046483,GO:0046677,GO:0050896,GO:0051276,GO:0051716,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:1901360,GO:1901576 - 0.0000000000000000000001394 100.0
BYDH2_k127_8928077_2 Atypical PilZ domain, cyclic di-GMP receptor - - - 0.000000000000000004328 91.0
BYDH2_k127_8928077_3 PFAM CHRD domain containing protein - - - 0.0000000000001701 79.0
BYDH2_k127_8942573_0 Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002798 483.0
BYDH2_k127_8942573_1 Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation K03771 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005345 428.0
BYDH2_k127_8942573_2 Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) K00097 GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006081,GO:0006725,GO:0006732,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0008614,GO:0008615,GO:0009058,GO:0009108,GO:0009110,GO:0009987,GO:0016491,GO:0016614,GO:0016616,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0034641,GO:0036094,GO:0042364,GO:0042802,GO:0042816,GO:0042819,GO:0042822,GO:0042823,GO:0043167,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046184,GO:0046483,GO:0046872,GO:0046914,GO:0048037,GO:0050570,GO:0050662,GO:0051186,GO:0051188,GO:0051287,GO:0055114,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:0097159,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 1.1.1.262 0.000000000000000000004349 95.0
BYDH2_k127_8954472_0 Required for chromosome condensation and partitioning K03529 - - 1.185e-206 661.0
BYDH2_k127_8954472_1 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) K09457 - 1.7.1.13 0.000000000000000000000000000000000000000000000000000000000000001848 220.0
BYDH2_k127_8973624_0 type IV pilus secretin PilQ K02666 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001606 615.0
BYDH2_k127_8973624_1 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735 GO:0000166,GO:0003674,GO:0003824,GO:0003856,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009423,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016838,GO:0019438,GO:0019752,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046417,GO:0046872,GO:0046914,GO:0048037,GO:0050662,GO:0051287,GO:0070403,GO:0071704,GO:0097159,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 4.2.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001482 472.0
BYDH2_k127_8973624_2 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 GO:0000287,GO:0003674,GO:0003824,GO:0004765,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009423,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019438,GO:0019632,GO:0019752,GO:0032787,GO:0043167,GO:0043169,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0046872,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615 2.7.1.71 0.000000000000000000000000000000000000000000000000000003206 195.0
BYDH2_k127_897373_0 Leucine-rich repeat K13730 - - 0.000000000000000000000000000002774 136.0
BYDH2_k127_897373_1 Cellulose 1,4-beta-cellobiosidase - - - 0.00000000006682 75.0
BYDH2_k127_8988836_0 SpoVR family - - - 1.145e-252 786.0
BYDH2_k127_8988836_1 PrkA AAA domain K07180 - - 2.746e-199 623.0
BYDH2_k127_8988836_2 Belongs to the UPF0229 family K09786 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002977 538.0
BYDH2_k127_8988836_3 Outer membrane protein beta-barrel domain - - - 0.0002801 46.0
BYDH2_k127_8992356_0 cytochrome C peroxidase - - - 7.624e-213 670.0
BYDH2_k127_8992356_1 cytochrome C peroxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000301 406.0
BYDH2_k127_8995845_0 Bacterial extracellular solute-binding proteins, family 3 K02030 - - 0.00000000000000000000000000000000000000001051 167.0
BYDH2_k127_8995845_1 Histidine kinase - - - 0.0000000000000000000000000000004305 128.0
BYDH2_k127_8995845_2 PFAM YicC-like - - - 0.00000002747 58.0
BYDH2_k127_8996885_0 PBP superfamily domain K02040 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006754 479.0
BYDH2_k127_8996885_1 Histidine kinase K07636 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001248 445.0
BYDH2_k127_8996885_2 phosphate regulon transcriptional regulatory protein PhoB K07657 - - 0.000000000000000000000000000000000000000001914 157.0
BYDH2_k127_8996885_3 Signal transduction histidine kinase, subgroup 1, dimerisation phosphoacceptor domain K03320 - - 0.0000004301 54.0
BYDH2_k127_9026275_0 PFAM glucosamine galactosamine-6-phosphate isomerase K01057 - 3.1.1.31 0.0000000000000000000000000000000000000000000000002509 186.0
BYDH2_k127_9026275_1 COG0790 FOG TPR repeat, SEL1 subfamily K07126 - - 0.0000000000000000000000000006581 122.0
BYDH2_k127_9026275_2 Helicase associated domain (HA2) Add an annotation K03578 - 3.6.4.13 0.000000002535 59.0
BYDH2_k127_9077096_0 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000687 547.0
BYDH2_k127_9077096_1 Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity K03782 GO:0000302,GO:0003674,GO:0003824,GO:0004096,GO:0004601,GO:0005488,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009056,GO:0009636,GO:0009987,GO:0010035,GO:0016209,GO:0016491,GO:0016684,GO:0016999,GO:0017001,GO:0017144,GO:0020037,GO:0033554,GO:0034599,GO:0034614,GO:0035690,GO:0042221,GO:0042493,GO:0042542,GO:0042737,GO:0042743,GO:0042744,GO:0044237,GO:0044248,GO:0044424,GO:0044444,GO:0044464,GO:0046677,GO:0046906,GO:0048037,GO:0050896,GO:0051186,GO:0051187,GO:0051716,GO:0055114,GO:0070301,GO:0070887,GO:0071236,GO:0072593,GO:0097159,GO:0097237,GO:0098754,GO:0098869,GO:1901363,GO:1901700,GO:1901701,GO:1990748 1.11.1.21 0.0000000000000000000000000000000000000000000000000000000002858 203.0
BYDH2_k127_9084970_0 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000258 521.0
BYDH2_k127_9084970_1 Belongs to the NAD(P)-dependent epimerase dehydratase family K01784,K12448 - 5.1.3.2,5.1.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002125 491.0
BYDH2_k127_9084970_2 PAS fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001533 478.0
BYDH2_k127_9097154_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 2.438e-269 839.0
BYDH2_k127_9097154_1 Belongs to the KdsA family K01627 - 2.5.1.55 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005475 471.0
BYDH2_k127_9097154_2 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.000000000000000000095 93.0
BYDH2_k127_9097154_3 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 0.0000000000000004524 78.0
BYDH2_k127_9114707_0 Cytochrome c-type biogenesis protein CcmF K02198 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003639 484.0
BYDH2_k127_9114707_1 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02195 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005681 362.0
BYDH2_k127_9114707_2 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02194 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003918 284.0
BYDH2_k127_9114707_3 once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system K02193 - 3.6.3.41 0.000000000000000000000000000000000000000000000000000000000000000000002201 241.0
BYDH2_k127_9114707_4 Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH K02197 - - 0.000000000000000000000000000000000000000000000000455 179.0
BYDH2_k127_9114707_5 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02196 - - 0.000000000001493 70.0
BYDH2_k127_911602_0 - - - - 0.000000000000000000000000000000000000000000000000000000005565 203.0
BYDH2_k127_911602_1 helix_turn_helix, cAMP Regulatory protein K10914 - - 0.00000001362 64.0
BYDH2_k127_9146053_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 - 1.6.5.3 3.387e-224 700.0
BYDH2_k127_9146053_1 NADH-quinone oxidoreductase K00336 - 1.6.5.3 1.217e-212 673.0
BYDH2_k127_9146053_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006154 335.0
BYDH2_k127_9146053_3 NADH dehydrogenase K00334 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000006159 235.0
BYDH2_k127_920197_0 Oxidizes proline to glutamate for use as a carbon and nitrogen source K13821 - 1.2.1.88,1.5.5.2 7.512e-195 623.0
BYDH2_k127_920197_1 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004176 357.0
BYDH2_k127_920197_2 PFAM Formylglycine-generating sulfatase enzyme K18912 - 1.14.99.50 0.000000000000000000000000000000000000000000000000000000000000000000000000003441 265.0
BYDH2_k127_920197_3 PFAM Formylglycine-generating sulfatase enzyme - - - 0.00000000000000000000000000000000000000000000001134 184.0
BYDH2_k127_920197_4 PFAM Carbohydrate-selective porin OprB - - - 0.00000000000000001003 95.0
BYDH2_k127_9215740_0 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004603 394.0
BYDH2_k127_9215740_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000002477 251.0
BYDH2_k127_9215740_2 general secretion pathway protein - - - 0.00000000000000000000000000000000000000000000000000000000000001115 225.0
BYDH2_k127_9215740_3 - - - - 0.00000051 59.0
BYDH2_k127_9218144_0 Heptaprenyl diphosphate synthase component I K00805 - 2.5.1.30 0.000000000000000000000000000000000000000000000000003153 186.0
BYDH2_k127_9218144_1 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.00000000000000000000000000000003709 128.0
BYDH2_k127_9218144_2 NusG domain II - - - 0.000000000000000834 81.0
BYDH2_k127_9218144_3 tonb protein K03832 - - 0.0000000000001149 75.0
BYDH2_k127_9283858_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01531,K12955 - 3.6.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001667 549.0
BYDH2_k127_9283858_1 Polysaccharide biosynthesis protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001869 371.0
BYDH2_k127_9283858_2 heat shock protein binding - - - 0.00000000000000000000000000000000000000002444 159.0
BYDH2_k127_931374_0 Peptidogalycan biosysnthesis/recognition K09919 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002306 347.0
BYDH2_k127_931374_1 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000458 314.0
BYDH2_k127_9339925_0 Spermine/spermidine synthase domain K00797 - 2.5.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001831 476.0
BYDH2_k127_9344324_0 Glycine cleavage system T protein K00605 GO:0001505,GO:0003674,GO:0003824,GO:0004047,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006544,GO:0006546,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0009056,GO:0009063,GO:0009069,GO:0009071,GO:0009987,GO:0016054,GO:0016740,GO:0016741,GO:0017144,GO:0019464,GO:0019752,GO:0032259,GO:0042133,GO:0042135,GO:0042737,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046395,GO:0065007,GO:0065008,GO:0071704,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 2.1.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000027 466.0
BYDH2_k127_9344324_1 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00282 - 1.4.4.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000286 387.0
BYDH2_k127_9344324_2 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 GO:0001505,GO:0003674,GO:0005488,GO:0005504,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006544,GO:0006546,GO:0006807,GO:0008150,GO:0008152,GO:0008289,GO:0009056,GO:0009063,GO:0009069,GO:0009071,GO:0009987,GO:0016054,GO:0017144,GO:0019464,GO:0019752,GO:0031405,GO:0031406,GO:0033293,GO:0036094,GO:0042133,GO:0042135,GO:0042737,GO:0043167,GO:0043168,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046395,GO:0048037,GO:0050662,GO:0065007,GO:0065008,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606,GO:1901681 - 0.0000000000000000000000000000000000000000000009268 168.0
BYDH2_k127_9354792_0 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.0000000000000000000000000000000000000000000000000008936 185.0
BYDH2_k127_9354792_1 PFAM toluene tolerance K07323 - - 0.000000000000000000000000000000000000000000000002142 182.0
BYDH2_k127_9354792_2 Outer membrane efflux protein - - - 0.00000000000000000000000000000000000003099 147.0
BYDH2_k127_9354792_3 BolA-like protein - - - 0.00000000000000000003915 93.0
BYDH2_k127_9354792_4 NTP binding protein (Contains STAS domain) K07122 - - 0.0000000000000871 75.0
BYDH2_k127_9392222_0 ATP-grasp domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000727 329.0
BYDH2_k127_9392222_1 COG2897 Rhodanese-related sulfurtransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000001052 242.0
BYDH2_k127_9392222_2 Coenzyme PQQ synthesis protein D (PqqD) - - - 0.0000000000000000001218 92.0
BYDH2_k127_9402360_0 TIGRFAM Oxaloacetate decarboxylase, alpha subunit K01960 - 6.4.1.1 4.766e-285 887.0
BYDH2_k127_9402360_1 TIGRFAM acetyl-CoA carboxylase, biotin carboxylase K01959 - 6.4.1.1 2.819e-238 743.0
BYDH2_k127_9402360_2 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006231 456.0
BYDH2_k127_9402360_3 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.00000000000000000000000000000000000000000000000000000000001859 207.0
BYDH2_k127_9402360_4 metal-binding, possibly nucleic acid-binding protein K07040 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000001406 120.0
BYDH2_k127_9402360_5 Belongs to the bacterial ribosomal protein bL32 family K02911 - - 0.00000000000000000000001926 100.0
BYDH2_k127_9402360_6 Maf-like protein K06287 GO:0003674,GO:0003824,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0047429 - 0.000000000001133 69.0
BYDH2_k127_9415028_0 modulator of DNA gyrase K03592 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000018 253.0
BYDH2_k127_9415028_1 PQ loop repeat K15383 - - 0.00000000000000000000001899 102.0
BYDH2_k127_9415028_2 Pentapeptide repeats (8 copies) - - - 0.0002515 52.0
BYDH2_k127_9423070_0 type II secretion system protein E K02454,K02652,K12276 - - 5.396e-204 643.0
BYDH2_k127_9423070_1 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000002811 143.0
BYDH2_k127_9460531_0 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE K11893 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004357 340.0
BYDH2_k127_9460531_1 Type VI secretion system protein DotU K11892 - - 0.000000000000000000000000000000000000000002684 163.0
BYDH2_k127_9460531_2 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 - - - 0.000000000000000000008929 101.0
BYDH2_k127_9471848_0 PFAM malic K00029 - 1.1.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000741 512.0
BYDH2_k127_9471848_1 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 GO:0003674,GO:0003824,GO:0004853,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006536,GO:0006725,GO:0006778,GO:0006779,GO:0006780,GO:0006782,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009064,GO:0009987,GO:0016053,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019353,GO:0019438,GO:0019752,GO:0033013,GO:0033014,GO:0033526,GO:0034641,GO:0042168,GO:0042440,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046394,GO:0046483,GO:0046501,GO:0046502,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 4.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001092 357.0
BYDH2_k127_9522378_0 Vacuole effluxer Atg22 like K06902 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001567 511.0
BYDH2_k127_9522378_1 peptidase activity, acting on L-amino acid peptides K01337,K01400,K20276 - 3.4.21.50,3.4.24.28 0.0000000000000000000000000000000000000000000000000002 201.0
BYDH2_k127_9522378_2 CheB methylesterase K03412,K06597 - 3.1.1.61,3.5.1.44 0.0004291 51.0
BYDH2_k127_9524906_0 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000002017 236.0
BYDH2_k127_9524906_1 Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins K02461 - - 0.00000000000000000000000000000000000000000000000000000000000000005571 237.0
BYDH2_k127_9524906_2 Type II secretion system (T2SS), protein K K02460 - - 0.000000000000000000000000000000000000000000000000000004839 205.0
BYDH2_k127_9524906_3 Type II secretion system (T2SS), protein J - - - 0.0000000000000000000000000000000000001206 149.0
BYDH2_k127_9524906_4 Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins K02462 - - 0.00000000000000000000000000001643 125.0
BYDH2_k127_9524906_5 General secretion pathway protein I K02458 GO:0002790,GO:0006810,GO:0008104,GO:0008150,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0032940,GO:0033036,GO:0042886,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0071702,GO:0071705 - 0.0000000000000000000009341 99.0
BYDH2_k127_9524906_6 Type II secretion system (T2SS), protein N K02463 GO:0002790,GO:0006810,GO:0008104,GO:0008150,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0032940,GO:0033036,GO:0042886,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0071702,GO:0071705 - 0.00000000000000229 87.0
BYDH2_k127_9535917_0 4Fe-4S dicluster domain - - - 2.654e-260 808.0
BYDH2_k127_9535917_1 Nitrate reductase gamma subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000015 335.0
BYDH2_k127_9535917_2 Belongs to the DsrF TusC family K07236 - - 0.00000000000000000000000000000000000000000000000000000002149 199.0
BYDH2_k127_9535917_3 part of a sulfur-relay system K11179 - - 0.000000000000000000000000000000000000000000000000000004161 192.0
BYDH2_k127_9535917_4 DsrE/DsrF-like family K07235 - - 0.000000000000000000000000000000000003475 137.0
BYDH2_k127_9535917_5 DsrH like protein K07237 - - 0.0000000000000000000000000000001629 128.0
BYDH2_k127_9549080_0 Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB K02454 - - 1.172e-214 679.0
BYDH2_k127_9549080_1 4Fe-4S dicluster domain K11473 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001806 537.0
BYDH2_k127_9549080_2 general secretion pathway protein D K02453 - - 0.00000000000000000000000000000000000000000000000000000000000000000002696 241.0
BYDH2_k127_9549080_3 COG0277 FAD FMN-containing dehydrogenases K11472 GO:0003674,GO:0003824,GO:0006066,GO:0006082,GO:0008150,GO:0008152,GO:0009056,GO:0009441,GO:0009987,GO:0016054,GO:0016491,GO:0016614,GO:0017144,GO:0019154,GO:0019752,GO:0032787,GO:0034308,GO:0034310,GO:0042737,GO:0043436,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0046164,GO:0046296,GO:0046395,GO:0055114,GO:0071704,GO:0072329,GO:1901575,GO:1901615,GO:1901616 - 0.000000000000000000000000000000000000003553 149.0
BYDH2_k127_9590271_0 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001463 321.0
BYDH2_k127_9590271_1 Diguanylate cyclase - - - 0.000000000000000000000000000000009726 131.0
BYDH2_k127_9590271_2 - - - - 0.000000000000000000000000000001501 124.0
BYDH2_k127_961278_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 6.4e-323 998.0
BYDH2_k127_961278_1 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000226 615.0
BYDH2_k127_961278_2 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 - 2.5.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001238 327.0
BYDH2_k127_961278_3 Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit K02427 - 2.1.1.166 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000008938 285.0
BYDH2_k127_961278_4 Domain of unknown function (DUF4149) - - - 0.00000000000000000000000003885 112.0
BYDH2_k127_961278_5 CRS1_YhbY K07574 GO:0000027,GO:0000028,GO:0000966,GO:0000967,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016072,GO:0022607,GO:0022613,GO:0022618,GO:0034470,GO:0034471,GO:0034622,GO:0034641,GO:0034660,GO:0042254,GO:0042255,GO:0042273,GO:0042274,GO:0043021,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0046483,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:1901360,GO:1990275 - 0.0000000000000000000000403 104.0
BYDH2_k127_9657278_0 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004317 364.0
BYDH2_k127_9657278_1 - - - - 0.00000000000000000000000000001494 122.0
BYDH2_k127_9657278_2 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.0006343 43.0
BYDH2_k127_966665_0 Aldehyde dehydrogenase family K00128 - 1.2.1.3 2.809e-219 687.0
BYDH2_k127_966665_1 Belongs to the ParA family K03609 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001084 404.0
BYDH2_k127_966665_2 smart pdz dhr glgf - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003703 326.0
BYDH2_k127_966665_3 Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization K03610 - - 0.000000000000000000000000000000000003606 141.0
BYDH2_k127_966665_4 Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell K03608 - - 0.0000000000000000000000000004825 115.0
BYDH2_k127_9711360_0 Fatty acid hydroxylase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001454 462.0
BYDH2_k127_9711360_1 Domain of unknown function (DUF1971) - - - 0.000000000000000000000000006593 111.0
BYDH2_k127_9711360_2 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family - - - 0.0000000000000000000005639 98.0
BYDH2_k127_9711360_3 ABC transporter K02003 - - 0.000000000000007947 74.0
BYDH2_k127_9714308_0 Exodeoxyribonuclease III K01142 - 3.1.11.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001157 385.0
BYDH2_k127_9714308_1 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001058 303.0
BYDH2_k127_9714308_2 oligosaccharyl transferase activity - - - 0.0000000000004052 74.0
BYDH2_k127_9733686_0 COG0457 FOG TPR repeat - - - 0.000000000000000000000000000000000000000000000000000001619 210.0
BYDH2_k127_975370_0 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 GO:0000027,GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005515,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006996,GO:0008150,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0022607,GO:0022613,GO:0022618,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0032794,GO:0034622,GO:0035639,GO:0036094,GO:0042254,GO:0042255,GO:0042273,GO:0043021,GO:0043022,GO:0043023,GO:0043167,GO:0043168,GO:0043933,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:0097159,GO:0097216,GO:0097367,GO:1901265,GO:1901363 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007799 561.0
BYDH2_k127_975370_1 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K17713 - - 0.000000000000000000000000000000000000000000000000000000000001965 217.0
BYDH2_k127_975370_2 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.000000000000000000000000000003395 121.0
BYDH2_k127_975370_3 PEP-CTERM motif - - - 0.00000000000000000000000000815 118.0
BYDH2_k127_9758149_0 ABC transporter K11963 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002715 357.0
BYDH2_k127_9758149_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000003082 221.0
BYDH2_k127_9758149_2 pfam abc K11962 - - 0.0000000000000000000000000000000000000000000000000000000008766 202.0
BYDH2_k127_9759781_0 Belongs to the SAICAR synthetase family K01923 GO:0003674,GO:0003824,GO:0004639,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001868 387.0
BYDH2_k127_9759781_1 (Lipo)protein K07287 - - 0.000000000000000000000000000000000000000000000000000009939 198.0
BYDH2_k127_9759781_2 DNA-directed DNA polymerase activity - - - 0.0000000000004803 81.0
BYDH2_k127_9759781_3 guanyl-nucleotide exchange factor activity K01179,K03929,K09612,K12287,K19701,K19702 GO:0003674,GO:0003824,GO:0004177,GO:0005575,GO:0005623,GO:0006464,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0009987,GO:0016787,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0036211,GO:0042597,GO:0043170,GO:0043412,GO:0043687,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.2.1.4,3.4.11.10,3.4.11.24,3.4.11.6 0.0001618 54.0
BYDH2_k127_9765602_0 Glycosyltransferase like family 2 K20534 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004303 425.0
BYDH2_k127_9765602_1 Polysaccharide biosynthesis protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001815 396.0
BYDH2_k127_9765602_2 Glycosyltransferase like family 2 K20444 - - 0.00000000000000000000000000000000000000000000000000000000006538 211.0
BYDH2_k127_9765602_3 Glycosyl transferase, family 2 - - - 0.00000000000000000000000000000000000000000000004521 182.0
BYDH2_k127_9765602_4 PFAM GCN5-related N-acetyltransferase - - - 0.0000000000000000000000000000000000000000000001489 176.0
BYDH2_k127_9765602_5 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.000000000000000000000005447 117.0
BYDH2_k127_9765602_6 thiolester hydrolase activity - - - 0.0000000001766 65.0
BYDH2_k127_9770482_0 DNA polymerase III alpha subunit K02337 - 2.7.7.7 0.0 1503.0
BYDH2_k127_9781644_0 low molecular weight K01104 - 3.1.3.48 0.0000000000000000000000000000000000000000000000000000000000000178 218.0
BYDH2_k127_9781644_1 COG1047 FKBP-type peptidyl-prolyl cis-trans isomerases 2 K03775 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000001934 207.0
BYDH2_k127_9781644_2 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 GO:0000271,GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0005996,GO:0006082,GO:0006629,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0008690,GO:0009058,GO:0009059,GO:0009103,GO:0009244,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016053,GO:0016740,GO:0016772,GO:0016779,GO:0019294,GO:0019752,GO:0033692,GO:0034637,GO:0034645,GO:0043167,GO:0043169,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046364,GO:0046394,GO:0046400,GO:0046401,GO:0046872,GO:0070567,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 2.7.7.38 0.00000000000000000000000000000000000000000001906 165.0
BYDH2_k127_9781644_3 Histidine kinase - - - 0.0000000000000000000000000000000000002529 152.0
BYDH2_k127_9786187_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003556 584.0
BYDH2_k127_9786187_1 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001199 314.0
BYDH2_k127_9803792_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.0 1366.0
BYDH2_k127_9803792_1 AAA ATPase domain - - - 0.000000000000000000000000315 111.0
BYDH2_k127_9810465_0 Oxygen tolerance - - - 0.000000000000000000000000000000000000000000000000000003115 207.0
BYDH2_k127_9810465_1 Protein of unknown function (DUF3570) - - - 0.0000000000000000000000000000000000000000002877 170.0
BYDH2_k127_9826335_0 diguanylate cyclase (GGDEF) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000009569 250.0
BYDH2_k127_9826335_1 Protein of unknown function (DUF2892) - - - 0.0000000000000000000608 91.0
BYDH2_k127_9826335_2 Belongs to the MtfA family K09933 - - 0.0000000001919 64.0
BYDH2_k127_9855278_0 PFAM Orn DAP Arg decarboxylase 2 K01586 - 4.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002551 598.0
BYDH2_k127_9855278_1 PFAM AMP-dependent synthetase and ligase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003464 363.0
BYDH2_k127_9855278_2 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001644 314.0
BYDH2_k127_9855278_3 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001182 290.0
BYDH2_k127_9855278_4 lipolytic protein G-D-S-L family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007267 300.0
BYDH2_k127_9874506_0 TIGRFAM Tryptophanyl-tRNA synthetase K01867 - 6.1.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007906 352.0
BYDH2_k127_9874506_1 Thioredoxin-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005912 341.0
BYDH2_k127_9874506_2 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008291 336.0
BYDH2_k127_9874506_3 Belongs to the pseudouridine synthase RsuA family K06178 GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022613,GO:0031118,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 5.4.99.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001158 332.0
BYDH2_k127_9874506_4 diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001111 250.0
BYDH2_k127_9874506_5 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.000000000000000000000000000000000000000000000000000000000000000000005457 241.0
BYDH2_k127_9894136_0 PFAM glycoside hydrolase, family 77 K00705 - 2.4.1.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005105 481.0
BYDH2_k127_9894136_1 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate K03271 - 5.3.1.28 0.00000000000000000000000000000000000000000000000000000000000000000000001249 249.0
BYDH2_k127_9894136_2 Carbohydrate phosphorylase K00688 - 2.4.1.1 0.000000000000000000001912 97.0
BYDH2_k127_9894866_0 PFAM Formylglycine-generating sulfatase enzyme K18912 - 1.14.99.50 0.0000000000000000000000000000000000000000000000000000000000000000000000000004582 271.0
BYDH2_k127_9894866_1 Sulfatase-modifying factor enzyme 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000002206 243.0
BYDH2_k127_9894866_2 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems, periplasmic components K02051 - - 0.00000000000000000000000000000000000000000000000000000000000000000008424 243.0
BYDH2_k127_9894866_3 ABC transporter K02049 - - 0.0000000000000000000000000000000000000000000000000000000000000000002668 242.0
BYDH2_k127_9894866_4 PFAM binding-protein-dependent transport systems inner membrane component K02050 - - 0.00000000000000000000000000000000000000000000000000000000000000004058 231.0
BYDH2_k127_9894866_5 iron ion homeostasis K02012 GO:0005575,GO:0005623,GO:0042597,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000005052 234.0
BYDH2_k127_9894866_6 PFAM Formylglycine-generating sulfatase enzyme K06196,K12267 - 1.8.4.11,1.8.4.12 0.000000000000000000000000000000000000000000000000006979 190.0
BYDH2_k127_9894866_7 PFAM EamA-like transporter family - - - 0.0000000294 56.0
BYDH2_k127_9897430_0 PFAM Aminotransferase class-III K01845 - 5.4.3.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002281 557.0
BYDH2_k127_9897430_1 AcrB/AcrD/AcrF family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003988 500.0
BYDH2_k127_9906045_0 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009898,GO:0009987,GO:0016020,GO:0016310,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019538,GO:0019843,GO:0019897,GO:0019898,GO:0022613,GO:0031234,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0035639,GO:0036094,GO:0036211,GO:0042254,GO:0042274,GO:0043021,GO:0043024,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0044877,GO:0046777,GO:0070181,GO:0071704,GO:0071840,GO:0071944,GO:0097159,GO:0097367,GO:0098552,GO:0098562,GO:1901265,GO:1901363,GO:1901564 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004647 398.0
BYDH2_k127_9906045_1 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 GO:0000287,GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016072,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019899,GO:0022613,GO:0032296,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043167,GO:0043169,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363 3.1.26.3 0.0000000000000000000000000000000000000000000000000000000000000000000001461 244.0
BYDH2_k127_9906045_2 Involved in DNA repair and RecF pathway recombination K03584 - - 0.0000000002542 62.0
BYDH2_k127_9933191_0 Belongs to the ParA family K04562 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004 406.0
BYDH2_k127_9933191_1 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes K02405 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002847 320.0
BYDH2_k127_9933191_2 cheY-homologous receiver domain K03413 - - 0.000000000000000000000000000000000000000000000000000000000000000001361 229.0
BYDH2_k127_9933191_3 Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P) K03414 - - 0.0000000000000000000000000000000000000000000000000000000000000002434 228.0
BYDH2_k127_9933191_4 Signal transducing histidine kinase, homodimeric K03407 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000001083 224.0
BYDH2_k127_9933191_5 COG1419 Flagellar GTP-binding protein K02404 - - 0.000001013 52.0
BYDH2_k127_9965251_0 His Kinase A (phospho-acceptor) domain K02484,K07645 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003269 352.0
BYDH2_k127_9965251_1 Belongs to the transferase hexapeptide repeat family K00674 - 2.3.1.117 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000683 303.0
BYDH2_k127_9965251_2 Transcriptional regulatory protein, C terminal K02483 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000008803 262.0
BYDH2_k127_9965251_3 Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls K01439 - 3.5.1.18 0.0000000000000000000000000006067 113.0
BYDH2_k127_9984215_0 Belongs to the CarB family K01955 - 6.3.5.5 2.874e-226 708.0
BYDH2_k127_9984215_1 Carbamoyl-phosphate synthetase glutamine chain K01956 GO:0000050,GO:0003674,GO:0003824,GO:0004088,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005951,GO:0006082,GO:0006139,GO:0006206,GO:0006207,GO:0006220,GO:0006221,GO:0006520,GO:0006525,GO:0006526,GO:0006541,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019627,GO:0019637,GO:0019693,GO:0019752,GO:0019856,GO:0032991,GO:0034641,GO:0034654,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046112,GO:0046390,GO:0046394,GO:0046483,GO:0055086,GO:0071704,GO:0071941,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494 6.3.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007248 559.0
BYDH2_k127_9984215_2 DEAD-box RNA helicase involved in RNA degradation. Has RNA-dependent ATPase activity and unwinds double-stranded RNA K03732 - 3.6.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004827 385.0