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Overview

ID MAG00178
Name BYDH3_bin.1
Sample SMP0006
Taxonomy
Kingdom Bacteria
Phylum Desulfobacterota_G
Class Syntrophorhabdia
Order Syntrophorhabdales
Family Syntrophorhabdaceae
Genus Syntrophorhabdus
Species
Assembly information
Completeness (%) 74.63
Contamination (%) 0.61
GC content (%) 47.0
N50 (bp) 8,171
Genome size (bp) 1,967,770

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes1965

Gene name Description KEGG GOs EC E-value Score Sequence
BYDH3_k127_1006081_0 PFAM AMP-dependent synthetase and ligase K01897,K22319 - 6.1.3.1,6.2.1.3 5.443e-233 729.0
BYDH3_k127_1006081_1 PFAM AMP-dependent synthetase and ligase K01897,K22319 - 6.1.3.1,6.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000565 616.0
BYDH3_k127_1006081_2 extracellular solute-binding protein, family 7 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009861 428.0
BYDH3_k127_1006081_3 helix_turn_helix gluconate operon transcriptional repressor K05799 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003174 310.0
BYDH3_k127_1006081_4 ABC transporter K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003246 309.0
BYDH3_k127_1006081_5 Transport permease protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003215 261.0
BYDH3_k127_1006081_6 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.0000000000000000000000000000000000000000000000000000000002585 205.0
BYDH3_k127_1006081_7 Trap-type c4-dicarboxylate transport system, small permease component K11689 - - 0.00000000000000000000000000000000000000000000000002249 184.0
BYDH3_k127_1006081_8 Carbon monoxide dehydrogenase subunit G (CoxG) - - - 0.00000000000000000000001128 101.0
BYDH3_k127_100634_0 Uncharacterised protein family UPF0047 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004408 265.0
BYDH3_k127_100634_1 SMART Signal transduction response regulator, receiver domain - - - 0.00000000000000000000000000000000000000000000000000003249 199.0
BYDH3_k127_100634_2 protein conserved in bacteria - - - 0.0000000000000000000000000000000000001615 146.0
BYDH3_k127_100634_3 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.00000000000000000000000000000000004882 141.0
BYDH3_k127_100634_4 Protein of unknown function (DUF2628) - - - 0.0000000000000000000000002679 109.0
BYDH3_k127_100634_5 Exonuclease VII small subunit K03602 - 3.1.11.6 0.0000000000004592 72.0
BYDH3_k127_10106481_0 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 7.752e-232 721.0
BYDH3_k127_10106481_1 Isochorismatase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005257 314.0
BYDH3_k127_10106481_2 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.0000000000000000000000000000000000000000000000000000000000000003128 222.0
BYDH3_k127_10106481_3 Sporulation and spore germination - - - 0.00000000000000000000000000000000000000000000000009344 184.0
BYDH3_k127_10151472_0 tRNA synthetases class I (W and Y) K01866 GO:0003674,GO:0003824,GO:0004812,GO:0004831,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016875,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.1.1.1 5.437e-212 664.0
BYDH3_k127_10151472_1 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008952 354.0
BYDH3_k127_10151472_2 YmdB-like protein K09769 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007907 265.0
BYDH3_k127_10151472_3 Glycosyl hydrolase 108 K08309 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000658 263.0
BYDH3_k127_10151472_4 Cache domain - - - 0.000000000000000000000000000000000000003815 150.0
BYDH3_k127_10222396_0 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 3.265e-270 835.0
BYDH3_k127_10222396_1 Elongator protein 3, MiaB family, Radical SAM - - - 2.23e-208 653.0
BYDH3_k127_10222396_10 Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis K01042 GO:0003674,GO:0003824,GO:0004125,GO:0006139,GO:0006399,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016740,GO:0016785,GO:0018130,GO:0019438,GO:0032774,GO:0034641,GO:0034654,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0046483,GO:0071704,GO:0090304,GO:0097056,GO:0140098,GO:0140101,GO:1901360,GO:1901362,GO:1901576 2.9.1.1 0.00000000013 63.0
BYDH3_k127_10222396_2 Converts GTP to 7,8-dihydroneopterin triphosphate K09007 - 3.5.4.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004161 471.0
BYDH3_k127_10222396_3 Polyprenyl synthetase K00795,K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005807 473.0
BYDH3_k127_10222396_4 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006042 396.0
BYDH3_k127_10222396_5 Mo-molybdopterin cofactor biosynthetic process - - - 0.00000000000000000000000000000000000000000000000000000000000000003087 231.0
BYDH3_k127_10222396_6 6-pyruvoyl tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.000000000000000000000000000000000000000000000000001662 184.0
BYDH3_k127_10222396_7 Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate - - - 0.000000000000000000000000000000000009033 137.0
BYDH3_k127_10222396_8 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.00000000000000000000000005035 108.0
BYDH3_k127_10235040_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004687 457.0
BYDH3_k127_10235040_1 PLD-like domain K06131 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003968 276.0
BYDH3_k127_1026572_0 Iron-sulfur cluster-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001571 404.0
BYDH3_k127_1026572_1 HI0933-like protein K00313 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001334 392.0
BYDH3_k127_1026572_2 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002366 388.0
BYDH3_k127_1026572_3 Could be a 3Fe-4S cluster-containing protein - - - 0.000000000000000000000000000004233 123.0
BYDH3_k127_1026572_4 PFAM Electron transfer flavoprotein alpha beta-subunit K03521 - - 0.0000000000000000000000000001321 126.0
BYDH3_k127_1033663_0 AAA domain K07133 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001402 375.0
BYDH3_k127_1033663_1 Uncharacterized BCR, YaiI/YqxD family COG1671 K09768 - - 0.000000000000000000000000000000000000000000000000000002584 194.0
BYDH3_k127_1033663_2 - - - - 0.00000000000000000000000000000000000000000000000003261 183.0
BYDH3_k127_1033663_3 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines - - - 0.000000000000000000000000000000000000001205 150.0
BYDH3_k127_10353134_0 Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide K04656 - - 0.0 1057.0
BYDH3_k127_10353134_1 Biotin and Thiamin Synthesis associated K03150 - 4.1.99.19 5.977e-237 740.0
BYDH3_k127_10353134_2 Domain of unknown function (DUF362) - - - 8.777e-227 711.0
BYDH3_k127_10353134_3 50S ribosome-binding GTPase - - - 1.703e-208 654.0
BYDH3_k127_10353134_4 TIGRFAM hydrogenase expression formation protein HypD K04654 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000657 508.0
BYDH3_k127_10353134_5 Biotin and Thiamin Synthesis associated domain K01012 - 2.8.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001036 492.0
BYDH3_k127_10353134_6 Domain in cystathionine beta-synthase and other proteins. - - - 0.000000000000000000000000000000000000000000000000000000000000000009922 227.0
BYDH3_k127_10353134_7 Hydrogenase maturation protease K03605 - - 0.00000000000000000000000000000000000000000000000000000000008895 207.0
BYDH3_k127_10353134_8 Aspartate ammonia-lyase K01744 - 4.3.1.1 0.000000000000000000000007071 104.0
BYDH3_k127_10353134_9 HupF/HypC family K04653 - - 0.00000000000000000000135 95.0
BYDH3_k127_10367627_0 Amino acid kinase family K00947 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001373 481.0
BYDH3_k127_10367627_1 ABC transporter K02017,K06857 - 3.6.3.29,3.6.3.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005741 419.0
BYDH3_k127_10367627_2 Binding-protein-dependent transport system inner membrane component K05773 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009824 365.0
BYDH3_k127_10367627_3 tRNA wobble cytosine modification - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002471 320.0
BYDH3_k127_10367627_4 Psort location Cytoplasmic, score - - - 0.000000000000000000000000000000000000000000000000000000000000000000000005001 244.0
BYDH3_k127_10367627_5 Bacterial extracellular solute-binding protein K05772 - - 0.0000000000000000000000000000000000003202 140.0
BYDH3_k127_10367627_6 - - - - 0.00000000007124 66.0
BYDH3_k127_10432254_0 Adenylyl- / guanylyl cyclase, catalytic domain - - - 3.361e-273 867.0
BYDH3_k127_10432254_1 TIGRFAM diguanylate cyclase K02488 - 2.7.7.65 6.47e-231 722.0
BYDH3_k127_10432254_2 Peptidase dimerisation domain K01439,K13049 - 3.5.1.18 1.763e-202 636.0
BYDH3_k127_10432254_3 PFAM Radical SAM K04070 - 1.97.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001369 462.0
BYDH3_k127_10432254_4 Alpha/beta hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008595 302.0
BYDH3_k127_10432254_5 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000000000000000000000000000000000000000000000000005227 222.0
BYDH3_k127_10432254_6 translation release factor activity - - - 0.0000000000000000000000000000000000000000003892 162.0
BYDH3_k127_10432254_7 - - - - 0.000000000000000000000000000000000000000004849 155.0
BYDH3_k127_10432254_9 - - - - 0.000000000000000006096 84.0
BYDH3_k127_1049940_0 COG1233 Phytoene dehydrogenase and related proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003942 557.0
BYDH3_k127_1049940_1 Enoyl-(Acyl carrier protein) reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005731 348.0
BYDH3_k127_1049940_2 Protein of unknown function DUF89 K09680 - 2.7.1.33 0.000000000000000000000000000000000000000000000000000000000000000007341 235.0
BYDH3_k127_10500190_0 4Fe-4S dicluster domain - - - 8.894e-269 835.0
BYDH3_k127_10500190_1 PFAM Polysulphide reductase, NrfD K00185 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008761 471.0
BYDH3_k127_10500190_2 PFAM Nitrate reductase gamma subunit K00374 - 1.7.5.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001884 383.0
BYDH3_k127_10500190_3 4Fe-4S dicluster domain K00184 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008404 325.0
BYDH3_k127_10500190_4 - - - - 0.00000000000000000000000000000000000000000002619 164.0
BYDH3_k127_10527533_0 Possible lysine decarboxylase K06966 - 3.2.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001435 360.0
BYDH3_k127_10527533_1 Carbon-nitrogen hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002553 314.0
BYDH3_k127_10527533_2 Phosphodiester glycosidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000008849 237.0
BYDH3_k127_10527533_3 phosphorelay signal transduction system - - - 0.00000000000000000000000000000000000000000000000000002353 191.0
BYDH3_k127_10527533_4 regulation of single-species biofilm formation K13572 - - 0.000000000000000000000000000000000000186 153.0
BYDH3_k127_10527533_5 Protein of unknown function DUF72 - - - 0.00000000000000000000000000001498 121.0
BYDH3_k127_10604817_0 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 1.301e-205 643.0
BYDH3_k127_10604817_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002616 607.0
BYDH3_k127_10604817_10 ATPases associated with a variety of cellular activities K02013 - 3.6.3.34 0.000000000000000000000000000000000000000000000000000000000000592 224.0
BYDH3_k127_10604817_11 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.0000000000000000000000000000000000000000000000002308 179.0
BYDH3_k127_10604817_12 Periplasmic binding protein K02016 - - 0.000000000000000000000000000000002341 139.0
BYDH3_k127_10604817_15 Endonuclease Exonuclease Phosphatase - - - 0.0000003463 54.0
BYDH3_k127_10604817_2 PFAM Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007031 573.0
BYDH3_k127_10604817_3 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001088 537.0
BYDH3_k127_10604817_4 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001623 445.0
BYDH3_k127_10604817_5 Alcohol dehydrogenase GroES domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003546 426.0
BYDH3_k127_10604817_6 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007647 376.0
BYDH3_k127_10604817_7 NADH pyrophosphatase zinc ribbon domain K03426 - 3.6.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005714 327.0
BYDH3_k127_10604817_8 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 GO:0000166,GO:0000774,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0017076,GO:0030234,GO:0030554,GO:0036094,GO:0044424,GO:0044444,GO:0044464,GO:0050790,GO:0051082,GO:0060589,GO:0060590,GO:0065007,GO:0065009,GO:0097159,GO:0098772,GO:1901265,GO:1901363 - 0.0000000000000000000000000000000000000000000000000000000000000000000000001255 252.0
BYDH3_k127_10604817_9 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.000000000000000000000000000000000000000000000000000000000000000002071 241.0
BYDH3_k127_10609623_0 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002836 550.0
BYDH3_k127_10609623_1 Acyl-CoA synthetase (AMP-forming) AMP-acid ligase II - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004104 452.0
BYDH3_k127_10609623_2 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001273 415.0
BYDH3_k127_10609623_3 Cysteine-rich domain - - - 0.000000000000000000000000000000000000000000000000000000000000008358 217.0
BYDH3_k127_10609623_4 Bacterial extracellular solute-binding protein, family 7 - - - 0.00000000000000000000000000000000000000009195 154.0
BYDH3_k127_10609623_5 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.00000000000000000000000000000000000004779 148.0
BYDH3_k127_10650803_0 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000635 316.0
BYDH3_k127_10650803_1 Pfam:Arch_ATPase K02450 - - 0.000000000000000000000000000000000000000000000000003843 188.0
BYDH3_k127_10650803_4 - - - - 0.00004561 55.0
BYDH3_k127_10650803_5 Pyridoxal-dependent decarboxylase, C-terminal sheet domain K13747 - 4.1.1.96 0.0001312 47.0
BYDH3_k127_10680158_0 General secretory system II protein E domain protein K02652 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002506 523.0
BYDH3_k127_10680158_1 PFAM type II secretion system K02653,K12278 - - 0.00000000000000000000000000000000000000000000000000000002025 207.0
BYDH3_k127_10680158_2 Tetratricopeptide repeat - - - 0.00000000156 69.0
BYDH3_k127_10783874_0 DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity K03581 - 3.1.11.5 3.178e-246 767.0
BYDH3_k127_10783874_1 Carboxymuconolactone decarboxylase family K01607 - 4.1.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000001356 257.0
BYDH3_k127_10783874_3 PFAM LemA family protein K03744 - - 0.00000000000000000000000000000002473 127.0
BYDH3_k127_10841916_0 Nudix N-terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001739 574.0
BYDH3_k127_10841916_2 PFAM low molecular weight phosphotyrosine protein phosphatase K03741 - 1.20.4.1 0.00000000000000000000000000000000000000000000000000000001433 202.0
BYDH3_k127_10841916_3 PFAM Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000002133 190.0
BYDH3_k127_10841916_4 Putative redox-active protein (C_GCAxxG_C_C) - - - 0.0000000000000000000000000000000000002702 144.0
BYDH3_k127_10841916_5 Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins K03676 - - 0.0000000000000000007161 87.0
BYDH3_k127_10841916_7 - - - - 0.00000009069 57.0
BYDH3_k127_10851471_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 1.14e-322 991.0
BYDH3_k127_10851471_1 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 6.7e-268 833.0
BYDH3_k127_10851471_10 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 GO:0003674,GO:0005488,GO:0005515,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008150,GO:0009987,GO:0010033,GO:0035966,GO:0042221,GO:0043167,GO:0043169,GO:0046872,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0061077 - 0.00000000000000000000000000000000000000000000000001709 180.0
BYDH3_k127_10851471_11 methyltransferase activity - - - 0.00000000000000000000000000000000000000000000044 173.0
BYDH3_k127_10851471_12 Mycobacterial 4 TMS phage holin, superfamily IV K08972 - - 0.0000000000000000000000000000000000000000001511 161.0
BYDH3_k127_10851471_14 Dodecin K09165 - - 0.00000000000000000000000000000005394 125.0
BYDH3_k127_10851471_15 FMN binding - - - 0.0000000001452 61.0
BYDH3_k127_10851471_2 Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O K05601 - 1.7.99.1 7.601e-237 735.0
BYDH3_k127_10851471_3 DnaJ molecular chaperone homology domain K03686,K05516 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001505 526.0
BYDH3_k127_10851471_5 Uncharacterized protein conserved in bacteria (DUF2334) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002815 423.0
BYDH3_k127_10851471_6 Aldo/keto reductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004635 391.0
BYDH3_k127_10851471_7 Protein of unknown function DUF89 K09116 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001226 362.0
BYDH3_k127_10851471_8 4Fe-4S binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000658 310.0
BYDH3_k127_10965796_0 Transport of potassium into the cell K03549 GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0008150,GO:0008324,GO:0009987,GO:0015075,GO:0015077,GO:0015079,GO:0015318,GO:0015672,GO:0016020,GO:0022857,GO:0022890,GO:0030001,GO:0034220,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0071804,GO:0071805,GO:0098655,GO:0098660,GO:0098662 - 6.064e-317 978.0
BYDH3_k127_10965796_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit K02117 - 3.6.3.14,3.6.3.15 2.886e-310 957.0
BYDH3_k127_10965796_2 PFAM V-type ATPase 116 kDa K02123 - - 5.037e-275 861.0
BYDH3_k127_10965796_3 Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit K02118 - - 7.861e-273 842.0
BYDH3_k127_10965796_4 subunit (C K02119 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003282 414.0
BYDH3_k127_10965796_5 ATP hydrolysis coupled proton transport K02110,K02124 GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0042802,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001369 280.0
BYDH3_k127_10965796_6 Produces ATP from ADP in the presence of a proton gradient across the membrane K02121 - - 0.00000000000000000000000000000000000000000000000009803 183.0
BYDH3_k127_10965796_7 Produces ATP from ADP in the presence of a proton gradient across the membrane K02120 - - 0.00000000000000077 77.0
BYDH3_k127_10981122_0 Bacterial extracellular solute-binding protein, family 7 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000062 444.0
BYDH3_k127_10981122_1 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000537 358.0
BYDH3_k127_10981122_2 Aldehyde dehydrogenase family - - - 0.00000000000000000000000000000000000000000000000000000000000000005814 225.0
BYDH3_k127_10981122_3 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.00000000000000000000000000000000001894 140.0
BYDH3_k127_10981122_4 [2Fe-2S] binding domain K03518 - 1.2.5.3 0.00000000000000000000000000000002154 128.0
BYDH3_k127_10981122_5 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.00000000000000000000000000000006064 128.0
BYDH3_k127_10987989_0 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K00015,K15893 - 1.1.1.26 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000981 426.0
BYDH3_k127_10987989_1 Belongs to the SfsA family K06206 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003733 260.0
BYDH3_k127_10987989_2 methyltransferase - - - 0.00000000000003564 78.0
BYDH3_k127_10987989_3 methyltransferase - - - 0.00001271 48.0
BYDH3_k127_10993317_0 RNB K12573 - - 6.912e-309 960.0
BYDH3_k127_10993317_1 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001287 346.0
BYDH3_k127_10993317_2 DnaJ molecular chaperone homology domain K05516 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002458 319.0
BYDH3_k127_10993317_3 Beta-lactamase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001063 287.0
BYDH3_k127_10993317_4 AzlC protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000007687 235.0
BYDH3_k127_10993317_5 Zincin-like metallopeptidase - - - 0.0000000000000000000000000000000000000000000000000183 181.0
BYDH3_k127_10993317_6 Nitroreductase family - - - 0.00000000000000000000000000000000000000000000000009803 183.0
BYDH3_k127_10993317_7 Family of unknown function (DUF5329) - - - 0.00000000000000000000000003573 112.0
BYDH3_k127_10993317_8 Branched-chain amino acid transport protein (AzlD) - - - 0.000000000000000000000005153 104.0
BYDH3_k127_11005590_0 TIGRFAM glutamate synthase (NADPH), homotetrameric K00266 - 1.4.1.13,1.4.1.14 0.0 1282.0
BYDH3_k127_11005590_1 Integral membrane sensor signal transduction histidine kinase K02482 - 2.7.13.3 0.0 1124.0
BYDH3_k127_11005590_2 Histidine kinase - - - 2.796e-256 796.0
BYDH3_k127_11005590_3 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002231 248.0
BYDH3_k127_11005590_4 PFAM Cyclic nucleotide-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000001418 218.0
BYDH3_k127_11005590_5 Sugar phosphate isomerase - - - 0.00000000000000000000000000000000000000000000000000000000000009299 222.0
BYDH3_k127_11005590_6 TIGRFAM glutamate synthase (NADPH), homotetrameric K00266 - 1.4.1.13,1.4.1.14 0.00000000000000000000000000245 112.0
BYDH3_k127_11005590_7 TIGRFAM glutamate synthase (NADPH), homotetrameric K00266 - 1.4.1.13,1.4.1.14 0.000000000000000000000001025 103.0
BYDH3_k127_11005590_8 Dimerisation domain - - - 0.000000005303 58.0
BYDH3_k127_11025521_0 Belongs to the precorrin methyltransferase family K02302,K02303,K13542 - 1.3.1.76,2.1.1.107,4.2.1.75,4.99.1.4 1.091e-247 771.0
BYDH3_k127_11025521_1 Abc transporter K15497 - 3.6.3.55 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001199 553.0
BYDH3_k127_11025521_2 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003496 276.0
BYDH3_k127_11025521_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000009924 229.0
BYDH3_k127_1108995_0 Ftsk_gamma K03466 - - 0.0 1059.0
BYDH3_k127_1108995_1 Involved in DNA repair and RecF pathway recombination K03584 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004014 370.0
BYDH3_k127_1108995_2 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) K03634 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003893 294.0
BYDH3_k127_1108995_3 deoxyhypusine monooxygenase activity - - - 0.0000000000000000000000000008086 123.0
BYDH3_k127_1108995_4 Tellurite resistance protein TerB K05801 - - 0.000000003482 64.0
BYDH3_k127_11198869_0 Belongs to the transketolase family K00615 - 2.2.1.1 0.0 1075.0
BYDH3_k127_11198869_1 PFAM AICARFT IMPCHase bienzyme K00602 - 2.1.2.3,3.5.4.10 1.819e-252 781.0
BYDH3_k127_11198869_2 DNA polymerase X family K02347 - - 8.105e-207 647.0
BYDH3_k127_11198869_3 DNA polymerase X family K02347 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005541 275.0
BYDH3_k127_11198869_4 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.000000000000000000000000000000000000000000000000000000001265 207.0
BYDH3_k127_11215200_0 Pyruvate phosphate dikinase, PEP/pyruvate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003318 487.0
BYDH3_k127_11215200_1 extracellular ligand-binding receptor K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001112 307.0
BYDH3_k127_11215200_2 Pfam Pyridoxamine 5'-phosphate - - - 0.000000000000000000000000000000000000763 151.0
BYDH3_k127_11215200_3 S-adenosylmethionine-dependent methyltransferase K06969 - 2.1.1.191 0.000000000000000000000000002504 111.0
BYDH3_k127_11215200_4 - - - - 0.000000000000000000178 99.0
BYDH3_k127_11244027_0 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 1.069e-237 743.0
BYDH3_k127_11244027_1 TIGRFAM hydrogenase expression formation protein HypE K04655 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002526 440.0
BYDH3_k127_11244027_2 Domain of unknown function (DUF362) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001242 318.0
BYDH3_k127_11244027_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000262 242.0
BYDH3_k127_11244027_4 - - - - 0.00000000000000000000000000000000000000006137 154.0
BYDH3_k127_11244027_5 - - - - 0.0000000000000000000000003519 108.0
BYDH3_k127_11248725_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0 1542.0
BYDH3_k127_11248725_1 PFAM UvrD REP helicase K03657 - 3.6.4.12 0.0 1143.0
BYDH3_k127_11248725_2 phosphoenolpyruvate-protein phosphotransferase activity K01628 - 4.1.2.17 1.785e-223 699.0
BYDH3_k127_11248725_3 Actin K03569 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004111 591.0
BYDH3_k127_11248725_4 Phosphoadenosine phosphosulfate reductase family K21947 - 2.8.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003678 537.0
BYDH3_k127_11248725_5 AI-2E family transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001811 278.0
BYDH3_k127_11248725_6 Scavenger mRNA decapping enzyme C-term binding K02503 - - 0.000000000000000000000000000000000000000006055 156.0
BYDH3_k127_11248725_7 YtxH-like protein - - - 0.00000000000000000000000000000000000002245 149.0
BYDH3_k127_11248725_8 Cupin domain K11312 - - 0.000000000000000000000000000000000001712 140.0
BYDH3_k127_11306443_0 Belongs to the 'phage' integrase family - - - 0.000000000000000000000000000000000000000000000000000000000003515 222.0
BYDH3_k127_11306443_1 diguanylate cyclase - - - 0.0000000000000000000149 95.0
BYDH3_k127_11306443_2 - - - - 0.000000008059 60.0
BYDH3_k127_11312262_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002231 489.0
BYDH3_k127_11312262_1 Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000246 274.0
BYDH3_k127_11312262_2 Domain in cystathionine beta-synthase and other proteins. K07182 - - 0.000000000000000000000000000000000000000000000000000000000000000000001325 248.0
BYDH3_k127_11312262_3 - - - - 0.0000000000000000000000000000000000000000000299 162.0
BYDH3_k127_11312262_4 histidine kinase A domain protein - - - 0.00000000001847 78.0
BYDH3_k127_11312262_5 Major facilitator Superfamily K08218 - - 0.00000152 50.0
BYDH3_k127_11327088_0 Transmembrane secretion effector - - - 6.474e-244 763.0
BYDH3_k127_11327088_1 Elongator protein 3, MiaB family, Radical SAM - - - 3.539e-212 670.0
BYDH3_k127_11327088_10 Homocysteine biosynthesis enzyme, sulfur-incorporation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001688 263.0
BYDH3_k127_11327088_11 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001101 277.0
BYDH3_k127_11327088_12 Flavin reductase like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003839 246.0
BYDH3_k127_11327088_13 Helix-turn-helix domain - - - 0.00000000000000000000000000000000000000000000000000001091 197.0
BYDH3_k127_11327088_2 SMART AAA ATPase - - - 3.299e-202 636.0
BYDH3_k127_11327088_3 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006123 493.0
BYDH3_k127_11327088_4 Thiamine biosynthesis protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006057 478.0
BYDH3_k127_11327088_5 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006965 449.0
BYDH3_k127_11327088_6 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002356 409.0
BYDH3_k127_11327088_7 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003386 403.0
BYDH3_k127_11327088_8 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001148 360.0
BYDH3_k127_11327088_9 phosphorelay signal transduction system - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001327 308.0
BYDH3_k127_11339419_0 PFAM Radical SAM K22226 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004517 586.0
BYDH3_k127_11339419_1 Belongs to the ALAD family K01698 - 4.2.1.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002879 576.0
BYDH3_k127_11339419_2 SMART Elongator protein 3 MiaB NifB K22227 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001235 570.0
BYDH3_k127_11339419_3 PFAM S23 ribosomal protein - - - 0.000000000000000000000000000004016 123.0
BYDH3_k127_11339419_4 Membrane - - - 0.000000000000001101 87.0
BYDH3_k127_113807_0 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 2.765e-202 631.0
BYDH3_k127_113807_1 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002094 379.0
BYDH3_k127_113807_2 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002426 290.0
BYDH3_k127_113807_3 TIGRFAM Acetolactate synthase, small subunit K01653 GO:0003674,GO:0003824,GO:0003984,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005948,GO:0006082,GO:0006520,GO:0006549,GO:0006573,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009097,GO:0009099,GO:0009987,GO:0016053,GO:0016740,GO:0016744,GO:0019752,GO:0032991,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494,GO:1990234 2.2.1.6 0.000000000000001234 78.0
BYDH3_k127_11396890_0 NMT1-like family K02051 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004112 443.0
BYDH3_k127_11396890_1 UbiA prenyltransferase family K02548 - 2.5.1.74 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000155 436.0
BYDH3_k127_11396890_2 Binding-protein-dependent transport system inner membrane component K02050 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007123 418.0
BYDH3_k127_11396890_3 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) K03183 - 2.1.1.163,2.1.1.201 0.000000000000000000000000000000000000000000000000000000000000003037 225.0
BYDH3_k127_11396890_4 ATPases associated with a variety of cellular activities K02049 - - 0.000000000000000000000000000000000000000000000000000000000000167 220.0
BYDH3_k127_11396890_5 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.000000000000000000000000000000000000000000000000000000002081 203.0
BYDH3_k127_11396890_6 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000000000001361 159.0
BYDH3_k127_11396890_7 - - - - 0.0000000000000000000000000000000001032 134.0
BYDH3_k127_11438244_0 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006138 509.0
BYDH3_k127_11438244_1 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237,GO:0050515 2.7.1.148 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001603 387.0
BYDH3_k127_11438244_2 Protein of unknown function (DUF933) K06942 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002772 296.0
BYDH3_k127_11438244_3 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002061 296.0
BYDH3_k127_11438244_4 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 GO:0003674,GO:0003824,GO:0004045,GO:0016787,GO:0016788,GO:0052689,GO:0140098,GO:0140101 3.1.1.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007077 284.0
BYDH3_k127_11438244_5 Could be involved in septation K06412 - - 0.000000000000000007597 86.0
BYDH3_k127_11438244_6 Involved in the import of queuosine (Q) precursors, required for Q precursor salvage K09125 - - 0.00009551 44.0
BYDH3_k127_11450541_0 TIGRFAM galactose-1-phosphate uridylyltransferase K00965 - 2.7.7.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001668 544.0
BYDH3_k127_11450541_1 Beta-lactamase superfamily domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002739 454.0
BYDH3_k127_11450541_10 Elongator protein 3, MiaB family, Radical SAM - - - 0.0003039 45.0
BYDH3_k127_11450541_2 PFAM inositol monophosphatase K01092 - 3.1.3.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005355 432.0
BYDH3_k127_11450541_3 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005769 291.0
BYDH3_k127_11450541_4 4-vinyl reductase, 4VR K07013 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001189 270.0
BYDH3_k127_11450541_5 Radical SAM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002026 266.0
BYDH3_k127_11450541_6 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated K00567 - 2.1.1.63 0.00000000000000000000000000000000000000000000000000000000000000000008105 235.0
BYDH3_k127_11450541_7 PFAM asparagine synthase K06864 - - 0.000000000000000000000000000000000001561 140.0
BYDH3_k127_11450541_8 Histidine kinase - - - 0.00000000000000000000000000006801 116.0
BYDH3_k127_11450541_9 guanyl-nucleotide exchange factor activity K03117,K12684,K19231,K20276 - - 0.0001148 53.0
BYDH3_k127_11537419_0 Carbamoyl-phosphate synthetase large chain, oligomerisation domain K01955 - 6.3.5.5 0.0 1914.0
BYDH3_k127_11537419_1 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072,K12257 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003168 532.0
BYDH3_k127_11537419_2 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001601 448.0
BYDH3_k127_11537419_3 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072,K12257 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001152 342.0
BYDH3_k127_11537419_4 Phosphoribosyl transferase domain K02825 - 2.4.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007396 292.0
BYDH3_k127_11537419_6 aspartate ornithine carbamoyltransferase, carbamoyl-P binding domain K00609 GO:0003674,GO:0003824,GO:0004070,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016741,GO:0016743,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.3.2 0.000000000000001645 78.0
BYDH3_k127_11537419_7 4 iron, 4 sulfur cluster binding - - - 0.000000000005295 67.0
BYDH3_k127_11575860_0 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.0 1661.0
BYDH3_k127_11575860_1 Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding K07303 - 1.3.99.16 4.108e-303 948.0
BYDH3_k127_11575860_10 mercury ion transmembrane transporter activity K07213 - - 0.00000000000000000000002182 102.0
BYDH3_k127_11575860_11 Belongs to the HesB IscA family - - - 0.0000000000000000000001739 98.0
BYDH3_k127_11575860_13 Flagellar protein YcgR - - - 0.0000000005194 69.0
BYDH3_k127_11575860_14 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.00003749 51.0
BYDH3_k127_11575860_2 Aminotransferase class-V - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006975 598.0
BYDH3_k127_11575860_3 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00058 - 1.1.1.399,1.1.1.95 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007173 537.0
BYDH3_k127_11575860_4 Xylose isomerase-like TIM barrel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000307 405.0
BYDH3_k127_11575860_5 acetyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001053 314.0
BYDH3_k127_11575860_6 AAA domain, putative AbiEii toxin, Type IV TA system - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007806 273.0
BYDH3_k127_11575860_7 [2Fe-2S] binding domain K07302 - 1.3.99.16 0.000000000000000000000000000000000000000000000000000000000000000000000001853 247.0
BYDH3_k127_11575860_8 Phospholipid methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000007872 247.0
BYDH3_k127_11575860_9 3-beta hydroxysteroid dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000002024 247.0
BYDH3_k127_11595338_0 PAS domain - - - 0.0000000000000000000000000000000000000000000000000001952 209.0
BYDH3_k127_11595338_1 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000001735 134.0
BYDH3_k127_11595338_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000008187 79.0
BYDH3_k127_11595338_3 Suppressor of fused protein (SUFU) - - - 0.00000000947 67.0
BYDH3_k127_11605405_0 phosphoribosyltransferase. Source PGD - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005723 606.0
BYDH3_k127_11605405_1 SMART Elongator protein 3 MiaB NifB - - - 0.0000000000000000000000000000000000000000000000000003059 190.0
BYDH3_k127_11605405_2 EamA-like transporter family - - - 0.0000000000000000003501 89.0
BYDH3_k127_11617604_0 AMP-binding enzyme C-terminal domain K01897 - 6.2.1.3 0.0 997.0
BYDH3_k127_11617604_1 AMP-binding enzyme C-terminal domain - - - 8.573e-320 981.0
BYDH3_k127_11617604_2 Radical_SAM C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001346 398.0
BYDH3_k127_11617604_3 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0032296,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363 3.1.26.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008027 356.0
BYDH3_k127_11617604_4 Subtilase family - - - 0.00000511 51.0
BYDH3_k127_11617604_5 Subtilase family - - - 0.00001502 48.0
BYDH3_k127_11669979_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.9 0.0 1516.0
BYDH3_k127_11669979_1 ATP-dependent DNA helicase activity K03655 GO:0003674,GO:0003678,GO:0003724,GO:0003824,GO:0004003,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006725,GO:0006807,GO:0006996,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0008186,GO:0009314,GO:0009379,GO:0009628,GO:0009987,GO:0010501,GO:0016020,GO:0016043,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032392,GO:0032508,GO:0032991,GO:0033202,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048476,GO:0050896,GO:0051276,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0140097,GO:0140098,GO:1901360,GO:1902494 3.6.4.12 2.189e-274 859.0
BYDH3_k127_11669979_10 Necessary for normal cell division and for the maintenance of normal septation K03978 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000003652 255.0
BYDH3_k127_11669979_11 IMP dehydrogenase activity K04767 - - 0.00000000000000000000000000000000000000000000000000003413 189.0
BYDH3_k127_11669979_12 Contains one ATP-binding region, ATPase-like domain (IPR003594) - - - 0.00000000000000000000000000000000000000001113 167.0
BYDH3_k127_11669979_13 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000001571 149.0
BYDH3_k127_11669979_14 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000001715 146.0
BYDH3_k127_11669979_15 PAS fold - - - 0.00000000000000000000129 107.0
BYDH3_k127_11669979_2 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 4.637e-267 827.0
BYDH3_k127_11669979_3 Utp--glucose-1-phosphate uridylyltransferase K00972,K11442 - 2.7.7.23,2.7.7.83 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002266 612.0
BYDH3_k127_11669979_4 Putative nucleotidyltransferase substrate binding domain K07182 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000407 607.0
BYDH3_k127_11669979_5 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001347 602.0
BYDH3_k127_11669979_6 Phosphohydrolase-associated domain K01129 - 3.1.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001536 590.0
BYDH3_k127_11669979_7 Uracil DNA glycosylase superfamily K21929 - 3.2.2.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001299 331.0
BYDH3_k127_11669979_8 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001494 318.0
BYDH3_k127_11669979_9 Appr-1'-p processing enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001885 274.0
BYDH3_k127_11718651_0 Bacterial transferase hexapeptide (six repeats) K00640 - 2.3.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002635 529.0
BYDH3_k127_11718651_1 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009775 488.0
BYDH3_k127_11718651_2 PFAM ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000632 278.0
BYDH3_k127_11718651_3 Predicted membrane protein (DUF2318) - - - 0.000000000000000000000000000000008284 131.0
BYDH3_k127_11718651_5 PFAM Integral membrane protein TerC - - - 0.000000000000000008586 86.0
BYDH3_k127_11718651_6 Predicted membrane protein (DUF2318) - - - 0.000002578 49.0
BYDH3_k127_11738924_0 NAD(P)H dehydrogenase (quinone) activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007403 528.0
BYDH3_k127_11738924_1 Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC-XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids K03733,K04763 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001561 443.0
BYDH3_k127_11738924_2 GPR1/FUN34/yaaH family K07034 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001551 369.0
BYDH3_k127_11738924_3 NADPH-dependent FMN reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006358 296.0
BYDH3_k127_11738924_4 Virulence activator alpha C-term - - - 0.000000000000000000000000000000000000000000000000000000002928 205.0
BYDH3_k127_11738924_5 - - - - 0.00000000000000000000000000000000000000000009681 177.0
BYDH3_k127_1178364_0 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005509 301.0
BYDH3_k127_1178364_1 Belongs to the peptidase S8 family - - - 0.0000000000000000000000000000000000000000000000000000000004731 221.0
BYDH3_k127_1178364_2 VanZ like family - - - 0.000000000000000000000000000000000000001917 151.0
BYDH3_k127_1179257_0 Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates K00179 - 1.2.7.8 5.38e-267 832.0
BYDH3_k127_1179257_1 Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates K00179 - 1.2.7.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009623 446.0
BYDH3_k127_1179257_2 PFAM Aminotransferase class I and II K00812 - 2.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005133 266.0
BYDH3_k127_1179257_3 PFAM pyruvate ferredoxin flavodoxin oxidoreductase K00180 - 1.2.7.8 0.000000000000000000000000000000000000000000000000000000000000000000001816 241.0
BYDH3_k127_1179257_4 Dodecin K09165 - - 0.00000000000000000000000006366 110.0
BYDH3_k127_11881363_0 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily K01465 GO:0003674,GO:0003824,GO:0004038,GO:0004151,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006144,GO:0006145,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016787,GO:0016810,GO:0016812,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046113,GO:0046390,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 3.5.2.3 2.024e-222 696.0
BYDH3_k127_11881363_1 Belongs to the thiolase family K00626 - 2.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001185 583.0
BYDH3_k127_11881363_2 aspartate ornithine carbamoyltransferase, carbamoyl-P binding domain K00609 GO:0003674,GO:0003824,GO:0004070,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016741,GO:0016743,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001382 497.0
BYDH3_k127_11881363_3 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003256 430.0
BYDH3_k127_11881363_4 Phosphoribosyl transferase domain K02825 - 2.4.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003935 293.0
BYDH3_k127_11881363_5 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003054 246.0
BYDH3_k127_11881363_6 aspartate ornithine carbamoyltransferase, carbamoyl-P binding domain K00609 GO:0003674,GO:0003824,GO:0004070,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016741,GO:0016743,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.3.2 0.000000000005379 65.0
BYDH3_k127_11881363_7 indolepyruvate ferredoxin oxidoreductase activity K00179,K08941 - 1.2.7.8 0.00000000001892 65.0
BYDH3_k127_11887182_0 Peptidase family M48 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001138 613.0
BYDH3_k127_11887182_1 Beta-lactamase enzyme family K07258 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001006 410.0
BYDH3_k127_11887182_2 MgtE intracellular N domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002052 376.0
BYDH3_k127_11887182_3 ADP-heptose-lipopolysaccharide heptosyltransferase activity K02843,K02849 - - 0.000000000000000000005986 93.0
BYDH3_k127_11887182_4 ADP-heptose-lipopolysaccharide heptosyltransferase activity K02843,K02849 - - 0.00000000000000000008421 89.0
BYDH3_k127_11907034_0 tRNA nucleotidyltransferase poly(A) polymerase K00974 - 2.7.7.72 3.326e-297 919.0
BYDH3_k127_11907034_1 TIGRFAM signal peptide peptidase SppA, 36K type K04773 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001884 410.0
BYDH3_k127_11907034_10 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.000000007235 59.0
BYDH3_k127_11907034_2 Segregation and condensation protein ScpA K05896 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003337 366.0
BYDH3_k127_11907034_3 phosphate ion binding K02040 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006031 349.0
BYDH3_k127_11907034_4 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036,K02068,K06857 - 3.6.3.27,3.6.3.55 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004952 324.0
BYDH3_k127_11907034_5 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009721 311.0
BYDH3_k127_11907034_6 Oxidoreductase molybdopterin binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001563 255.0
BYDH3_k127_11907034_7 phosphate transport system permease protein K02038 - - 0.000000000000000000000000000000000000000000000000000000000000000000003622 239.0
BYDH3_k127_11907034_8 ABC-type phosphate transport system permease component K02038 - - 0.000000000000000000005211 95.0
BYDH3_k127_11907034_9 - - - - 0.000000000000005915 77.0
BYDH3_k127_11907188_0 Cysteine-rich domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004636 520.0
BYDH3_k127_11907188_1 FAD linked oxidases, C-terminal domain K00104 - 1.1.3.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006596 423.0
BYDH3_k127_11907188_2 PFAM Enoyl-CoA hydratase isomerase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007128 317.0
BYDH3_k127_11907188_3 Flavodoxin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000007387 242.0
BYDH3_k127_11907188_4 Thioesterase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000004659 228.0
BYDH3_k127_11907188_6 Uracil DNA glycosylase superfamily - - - 0.0000000000000000000000001401 115.0
BYDH3_k127_12008289_0 Receptor family ligand binding region K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005425 522.0
BYDH3_k127_12008289_1 Branched-chain amino acid transport system / permease component K01997,K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003012 376.0
BYDH3_k127_12008289_2 ABC transporter K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001304 318.0
BYDH3_k127_12008289_3 ABC transporter K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002129 311.0
BYDH3_k127_12008289_4 Branched-chain amino acid transport system / permease component K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000005714 241.0
BYDH3_k127_12008289_5 Branched-chain amino acid transport system / permease component K01997 - - 0.00000000000000000000000000000000000000000000000001214 181.0
BYDH3_k127_12008289_6 helix_turn_helix, Lux Regulon K14979 - - 0.00004733 48.0
BYDH3_k127_1203500_0 Threonine synthase N terminus K01733 - 4.2.3.1 1.153e-248 773.0
BYDH3_k127_1203500_1 MatE K03327 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001388 430.0
BYDH3_k127_1203500_2 Belongs to the Fur family K02076,K03711 GO:0000976,GO:0001067,GO:0001130,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0032991,GO:0032993,GO:0043565,GO:0044212,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1903506,GO:1990837,GO:2000112,GO:2001141 - 0.0000001065 54.0
BYDH3_k127_1203500_3 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS - - - 0.000008339 52.0
BYDH3_k127_1203500_4 PFAM Rhodanese domain protein - - - 0.00002557 46.0
BYDH3_k127_12038761_0 Glutamine amidotransferases class-II K00764 - 2.4.2.14 9.46e-214 674.0
BYDH3_k127_12038761_1 PFAM Cyclic nucleotide-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000004586 233.0
BYDH3_k127_12038761_2 Dinitrogenase iron-molybdenum cofactor - - - 0.000000000000000000000000000000000000000000002727 166.0
BYDH3_k127_12038761_3 - - - - 0.0000000000000000000000000000000000002434 145.0
BYDH3_k127_12038761_4 RsbT co-antagonist protein rsbRD N-terminal domain - - - 0.00000000000000000000000000000000002351 141.0
BYDH3_k127_12038761_5 Protein of unknown function DUF134 - - - 0.0000000000000000000000000006621 115.0
BYDH3_k127_12038761_6 Putative regulatory protein - - - 0.0000000000006593 71.0
BYDH3_k127_12038761_7 Mo-molybdopterin cofactor metabolic process K03154 - - 0.0000000000009104 69.0
BYDH3_k127_12043810_0 Lipopolysaccharide kinase (Kdo/WaaP) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004261 506.0
BYDH3_k127_12043810_1 Subtilase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003789 511.0
BYDH3_k127_12043810_10 Large extracellular alpha-helical protein - - - 0.0000000000000000327 96.0
BYDH3_k127_12043810_11 - - - - 0.000000003494 63.0
BYDH3_k127_12043810_2 PFAM Glycosyl transferase, group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000089 421.0
BYDH3_k127_12043810_3 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004788 404.0
BYDH3_k127_12043810_4 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004002 319.0
BYDH3_k127_12043810_5 YdjC-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001026 284.0
BYDH3_k127_12043810_6 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000002261 244.0
BYDH3_k127_12043810_7 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000001875 230.0
BYDH3_k127_12043810_8 geranylgeranyl reductase - - - 0.00000000000000000000000000000000000000000000005525 183.0
BYDH3_k127_12043810_9 SMART Cold shock protein K03704 - - 0.00000000000000000000000000000008168 125.0
BYDH3_k127_12082131_0 Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O K05601 - 1.7.99.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005565 407.0
BYDH3_k127_12082131_1 Domain of unknown function (DUF1732) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002139 407.0
BYDH3_k127_12082131_2 FtsJ-like methyltransferase K06442 - 2.1.1.226,2.1.1.227 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004645 354.0
BYDH3_k127_12082131_3 Essential for recycling GMP and indirectly, cGMP K00942 GO:0003674,GO:0003824,GO:0004385,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009126,GO:0009132,GO:0009135,GO:0009150,GO:0009161,GO:0009165,GO:0009167,GO:0009179,GO:0009185,GO:0009259,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0042278,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046037,GO:0046128,GO:0046483,GO:0046710,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.4.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000003145 259.0
BYDH3_k127_12082131_4 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 - 2.7.7.6 0.000000000000000000000000000000000009716 136.0
BYDH3_k127_12082131_5 Domain of unknown function (DUF4416) - - - 0.00000000000000000000000000000000004225 142.0
BYDH3_k127_12125039_0 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 8.605e-251 776.0
BYDH3_k127_12125039_1 PFAM Radical SAM - - - 5.229e-229 720.0
BYDH3_k127_12125039_2 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 5.907e-212 662.0
BYDH3_k127_12125039_3 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly K03589 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000228 378.0
BYDH3_k127_12125039_4 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000201 288.0
BYDH3_k127_12125039_5 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00123 - 1.17.1.9 0.000000000000000000000000003475 116.0
BYDH3_k127_1214192_0 TIGRFAM Arginyl-tRNA synthetase K01887 GO:0003674,GO:0003824,GO:0004812,GO:0004814,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006420,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.19 3.278e-291 900.0
BYDH3_k127_1214192_1 B12 binding domain - - - 3.945e-205 651.0
BYDH3_k127_1214192_2 Carbon-nitrogen hydrolase K12251 - 3.5.1.53 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002548 457.0
BYDH3_k127_1214192_3 methyltransferase K00570 - 2.1.1.17,2.1.1.71 0.00000000000000000000000000000000000001817 152.0
BYDH3_k127_1214192_4 TIGRFAM signal peptidase I K03100 - 3.4.21.89 0.0000000000000000000000008072 104.0
BYDH3_k127_12217095_0 Mechanosensitive ion channel - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001245 561.0
BYDH3_k127_12217095_1 Sulfatase K01130 - 3.1.6.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003355 291.0
BYDH3_k127_12302869_0 PFAM Pyridine nucleotide-disulphide oxidoreductase K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.0 1635.0
BYDH3_k127_12302869_1 Methyl-viologen-reducing hydrogenase, delta subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001215 324.0
BYDH3_k127_12302869_2 Thioredoxin-like [2Fe-2S] ferredoxin K00334,K03943 - 1.6.5.3,1.6.99.3 0.00000000000000000000000000000000000000000000008354 170.0
BYDH3_k127_12302869_3 Cysteine-rich domain - - - 0.0000000000000000000765 89.0
BYDH3_k127_12327947_0 Fructose-1,6-bisphosphatase K01622 - 3.1.3.11,4.1.2.13 7.633e-218 678.0
BYDH3_k127_12327947_1 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 3.885e-206 649.0
BYDH3_k127_12327947_2 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002915 366.0
BYDH3_k127_12327947_3 DNA polymerase alpha chain like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002789 351.0
BYDH3_k127_12327947_4 Bifunctional nuclease K08999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001255 306.0
BYDH3_k127_12327947_5 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000009151 254.0
BYDH3_k127_12327947_6 ADP-heptose-lipopolysaccharide heptosyltransferase activity K02843,K02849 - - 0.0000000000000000000000000000000000000000000000000000000003993 208.0
BYDH3_k127_12327947_7 hydrolase K01048 - 3.1.1.5 0.0006341 44.0
BYDH3_k127_12413103_0 Aldehyde ferredoxin oxidoreductase, N-terminal domain K03738 - 1.2.7.5 1.697e-298 927.0
BYDH3_k127_12413103_1 PhoU domain K02039 - - 0.000000000000000000000000000000000000000000000000000000000000000000000003066 245.0
BYDH3_k127_12413103_2 4fe-4S ferredoxin, iron-sulfur binding domain protein K19516 - - 0.00000000000000000000000000000000000000000000000000000000000000000000003604 246.0
BYDH3_k127_12413103_3 helix_turn_helix isocitrate lyase regulation - - - 0.000000000000000000000000000000000000000000000000000000000007797 216.0
BYDH3_k127_12413103_4 lactate metabolic process - - - 0.00000000000003301 72.0
BYDH3_k127_1243773_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1135.0
BYDH3_k127_1243773_1 PFAM Radical SAM K04069 - 1.97.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001298 581.0
BYDH3_k127_12462523_0 Receptor family ligand binding region K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000972 604.0
BYDH3_k127_12462523_1 Belongs to the 5'-nucleotidase family K11751,K17224 - 3.1.3.5,3.6.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007461 543.0
BYDH3_k127_12462523_2 Branched-chain amino acid transport system / permease component K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003876 506.0
BYDH3_k127_12462523_3 transport system permease K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004225 490.0
BYDH3_k127_12462523_4 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005335 491.0
BYDH3_k127_12462523_5 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005473 401.0
BYDH3_k127_12462523_6 ABC transporter K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001695 389.0
BYDH3_k127_12462523_7 PFAM Aminotransferase class I and II K04720 - 4.1.1.81 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004142 322.0
BYDH3_k127_12462523_8 - - - - 0.0000000000000000000000000000000000000000000000001789 178.0
BYDH3_k127_12503869_0 DNA photolyase K01669 - 4.1.99.3 5.534e-202 637.0
BYDH3_k127_12503869_1 Fatty acid hydroxylase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000001757 223.0
BYDH3_k127_12503869_2 Pyridoxamine 5'-phosphate oxidase - - - 0.00000000000000000000000000000000000000000000000000000000009909 205.0
BYDH3_k127_12503869_3 Pfam:Pyridox_oxidase - - - 0.0000000000000000000000000000000000000000000000000000222 192.0
BYDH3_k127_12503869_5 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 0.0000000000000158 73.0
BYDH3_k127_12503869_6 - - - - 0.00000000005993 64.0
BYDH3_k127_12558300_0 Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine K04487 - 2.8.1.7 1.145e-194 612.0
BYDH3_k127_12558300_1 MiaB-like tRNA modifying enzyme K18707 - 2.8.4.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008184 563.0
BYDH3_k127_12558300_2 NIL - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005214 250.0
BYDH3_k127_12558300_3 PFAM ApbE family K09740 - - 0.000000000000000000000000000000000000002132 147.0
BYDH3_k127_12558300_4 YGGT family K02221 - - 0.000000000000000000000000000000000000002971 149.0
BYDH3_k127_12558300_5 DUF167 K09131 - - 0.0000000000000000003999 90.0
BYDH3_k127_12558300_6 Uncharacterized ACR, COG1399 K07040 - - 0.0004585 44.0
BYDH3_k127_12608435_0 Insulinase (Peptidase family M16) K07263 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000402 475.0
BYDH3_k127_12608435_1 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002641 368.0
BYDH3_k127_12608435_2 cell redox homeostasis - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009683 359.0
BYDH3_k127_12608435_3 Peptidase M16 domain protein K07263 - - 0.00000000000000000006274 96.0
BYDH3_k127_12810420_0 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead - - - 4.982e-270 850.0
BYDH3_k127_12810420_1 PFAM Dinitrogenase iron-molybdenum cofactor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003121 358.0
BYDH3_k127_12810420_2 carbon monoxide dehydrogenase small subunit K03518 - 1.2.5.3 0.00000000000000000000000000000000000000000000000000008342 192.0
BYDH3_k127_12810420_3 xanthine dehydrogenase activity K04109 - 1.3.7.9 0.00000000000000000000000000000000000000000000000005527 190.0
BYDH3_k127_12810420_4 Family of unknown function (DUF5320) - - - 0.0000000000000000357 86.0
BYDH3_k127_12810420_5 4Fe-4S binding domain K03616 - - 0.00000000000001401 76.0
BYDH3_k127_12810420_6 ATPase MipZ - - - 0.000000001509 59.0
BYDH3_k127_12817731_0 PFAM Respiratory-chain NADH dehydrogenase domain 51 kDa subunit K00124,K00335 - 1.6.5.3 8.029e-276 861.0
BYDH3_k127_12817731_1 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region K00336 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004199 442.0
BYDH3_k127_12817731_2 Thioredoxin-like [2Fe-2S] ferredoxin K00334 - 1.6.5.3 0.000000000000000003504 85.0
BYDH3_k127_12920126_0 Conserved hypothetical protein 698 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001968 549.0
BYDH3_k127_12920126_1 Iron-sulfur cluster-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000315 326.0
BYDH3_k127_12920126_2 Secreted repeat of unknown function - - - 0.0000000000000000000000000000000000000000000000000000007993 195.0
BYDH3_k127_12920126_3 - - - - 0.00000000000000000000000000000000005566 137.0
BYDH3_k127_12930541_0 Membrane dipeptidase (Peptidase family M19) K01273 - 3.4.13.19 0.0000000000000000000000000259 121.0
BYDH3_k127_12930541_1 lytic transglycosylase activity K03194 - - 0.00000000000000000000008704 111.0
BYDH3_k127_12996227_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 2.378e-289 912.0
BYDH3_k127_12996227_1 SMART Elongator protein 3 MiaB NifB - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002419 546.0
BYDH3_k127_12996227_2 tRNA (Uracil-5-)-methyltransferase K03215 - 2.1.1.190 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001877 447.0
BYDH3_k127_13004405_0 May be involved in recombinational repair of damaged DNA K03631 - - 3.353e-237 743.0
BYDH3_k127_13004405_1 Peptidase U62 modulator of DNA gyrase K03592 - - 6.117e-194 614.0
BYDH3_k127_13004405_2 membrane protein involved in D-alanine export - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001206 502.0
BYDH3_k127_13004405_3 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002868 464.0
BYDH3_k127_13004405_4 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000088 385.0
BYDH3_k127_13004405_5 PFAM GCN5-related N-acetyltransferase K00619 - 2.3.1.1 0.000000000000000000000000000000000000000006096 158.0
BYDH3_k127_1417264_0 iron ion homeostasis K02015 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007949 386.0
BYDH3_k127_1417264_1 Periplasmic binding protein K02016 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001311 374.0
BYDH3_k127_1417264_2 AAA domain, putative AbiEii toxin, Type IV TA system - - - 0.00000000000000000000000000000000000000000000000000000000000000000001232 241.0
BYDH3_k127_1417264_3 TIGRFAM MazG family protein K02499,K04765 - 3.6.1.9 0.000000000000000000000000000000000000000002275 156.0
BYDH3_k127_1417264_4 PFAM Cold-shock protein, DNA-binding K03704 - - 0.000000000000000000000000188 106.0
BYDH3_k127_1417264_5 cobalamin-transporting ATPase activity K02014 - - 0.000000000000000003016 86.0
BYDH3_k127_1430652_0 His Kinase A (phosphoacceptor) domain - - - 6.799e-310 963.0
BYDH3_k127_1430652_1 Alginate O-acetylation protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008352 566.0
BYDH3_k127_1430652_2 Putative methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001328 464.0
BYDH3_k127_1430652_3 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000001398 265.0
BYDH3_k127_1430652_4 PFAM Peptidase family S58 - - - 0.000000000000000000000000000000000000000000000000000000000000000000006079 235.0
BYDH3_k127_1430652_5 O-methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000001775 227.0
BYDH3_k127_1430652_6 type I phosphodiesterase nucleotide pyrophosphatase - - - 0.0000000000000000000000000000000000000000000000000000000028 219.0
BYDH3_k127_1430652_7 - - - - 0.000000000000000000000000000000000000000000000000000002048 206.0
BYDH3_k127_1430652_8 Serine aminopeptidase, S33 K06889 - - 0.00000000000000000000000000009808 116.0
BYDH3_k127_1430652_9 isomerase activity K01821 GO:0003674,GO:0003824,GO:0006725,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0044237 5.3.2.6 0.00000000000000002243 83.0
BYDH3_k127_1441797_0 Alcohol dehydrogenase GroES-like domain K07538 - 1.1.1.368 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001252 530.0
BYDH3_k127_1441797_1 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008098 432.0
BYDH3_k127_1441797_2 ABC transporter K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003543 372.0
BYDH3_k127_1441797_3 ABC transporter, ATP-binding protein K01995 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001909 261.0
BYDH3_k127_1481850_0 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002861 597.0
BYDH3_k127_1481850_1 Alpha/beta hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004643 304.0
BYDH3_k127_1481850_2 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002611 243.0
BYDH3_k127_1481850_3 Domain of unknown function (DUF4412) - - - 0.0000000000002101 79.0
BYDH3_k127_1481850_4 Tetratricopeptide repeat - - - 0.0000001536 53.0
BYDH3_k127_1481850_5 DnaJ molecular chaperone homology domain K09514 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006457,GO:0008150,GO:0009987,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044087,GO:0044183,GO:0044424,GO:0044444,GO:0044464,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051082,GO:0051087,GO:0051128,GO:0051129,GO:0061077,GO:0065007,GO:0090083,GO:0090084 - 0.0005209 50.0
BYDH3_k127_166821_0 Bacterial membrane protein, YfhO - - - 4.265e-297 930.0
BYDH3_k127_166821_1 Bacterial regulatory protein, Fis family K07714 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006665 462.0
BYDH3_k127_166821_2 sodium-dependent phosphate transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001396 260.0
BYDH3_k127_166821_3 Prokaryotic N-terminal methylation motif - - - 0.0000000000000000000000000000000000000000000000000002132 188.0
BYDH3_k127_166821_4 methyltransferase - - - 0.00000000000000000000000000000000000000000000000004946 185.0
BYDH3_k127_166821_5 Prokaryotic N-terminal methylation motif - - - 0.000000000000000000000000000000000001369 144.0
BYDH3_k127_166821_6 Prokaryotic N-terminal methylation motif - - - 0.00000000000000000000000000000001475 130.0
BYDH3_k127_166821_7 peptidase U32 K08303 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000001309 85.0
BYDH3_k127_1685534_0 Glycosyltransferase family 20 K00697 - 2.4.1.15,2.4.1.347 1.67e-290 906.0
BYDH3_k127_1685534_1 Removes the phosphate from trehalose 6-phosphate to produce free trehalose K00697,K01087,K16055 GO:0000287,GO:0003674,GO:0003824,GO:0004805,GO:0005488,GO:0005975,GO:0005984,GO:0005991,GO:0005992,GO:0006793,GO:0006796,GO:0006950,GO:0006970,GO:0008150,GO:0008152,GO:0009058,GO:0009266,GO:0009311,GO:0009312,GO:0009409,GO:0009628,GO:0009987,GO:0016051,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019203,GO:0033554,GO:0034637,GO:0042578,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044262,GO:0046351,GO:0046872,GO:0050896,GO:0051716,GO:0070413,GO:0070415,GO:0070417,GO:0071704,GO:1901576 2.4.1.15,2.4.1.347,3.1.3.12 0.0000000000000000000000000000000000000000000000000000000000000000000000333 248.0
BYDH3_k127_1685534_2 glycosyl transferase family 2 K21349 - 2.4.1.268 0.0000168 47.0
BYDH3_k127_1689933_0 Acetyl-coenzyme A transporter 1 K08218 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001646 594.0
BYDH3_k127_1689933_1 Protein of unknown function (DUF1460) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000008391 263.0
BYDH3_k127_1689933_3 PFAM Glyoxalase bleomycin resistance protein dioxygenase K01759,K05606 - 4.4.1.5,5.1.99.1 0.000000000000000000321 93.0
BYDH3_k127_1726861_0 Type II secretion system protein E K02652 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005696 474.0
BYDH3_k127_1726861_1 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 GO:0002094,GO:0003674,GO:0003824,GO:0004659,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006066,GO:0006629,GO:0006720,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016093,GO:0016094,GO:0016740,GO:0016765,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046165,GO:0071704,GO:1901576,GO:1901615,GO:1901617 2.5.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005608 432.0
BYDH3_k127_1726861_2 PFAM SNARE associated Golgi protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006104 376.0
BYDH3_k127_1726861_3 PFAM MotA TolQ ExbB proton channel K03562 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006376 358.0
BYDH3_k127_1726861_4 TonB C terminal K03832 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005002 356.0
BYDH3_k127_1726861_5 Biopolymer transport protein ExbD/TolR K03560 - - 0.0000000000000000000000000000000000000000000000000000000000000000004681 229.0
BYDH3_k127_1726861_6 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP) K06153 - 3.6.1.27 0.000000000000000000000000000000000000000001387 166.0
BYDH3_k127_1729625_0 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain K00174 - 1.2.7.11,1.2.7.3 3.277e-252 790.0
BYDH3_k127_1729625_1 PFAM Thiamine pyrophosphate K00175 - 1.2.7.11,1.2.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009746 394.0
BYDH3_k127_1729625_2 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004284 318.0
BYDH3_k127_1729625_3 Bacterial extracellular solute-binding protein, family 7 - - - 0.0000000000000000000000000000000000000000002717 162.0
BYDH3_k127_1738508_0 PFAM Polysulphide reductase, NrfD - - - 9.726e-217 677.0
BYDH3_k127_1738508_1 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein K00124 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007032 428.0
BYDH3_k127_1738508_2 TIGRFAM formate dehydrogenase, alpha subunit K00123 - 1.17.1.9 0.000000000000000000000000000000000000001755 147.0
BYDH3_k127_1738508_3 Membrane - - - 0.0000000000000000000007315 105.0
BYDH3_k127_1738508_4 Transglycosylase SLT domain K08305 - - 0.000000000000000001476 87.0
BYDH3_k127_1749791_0 Carbamoyl-phosphate synthetase large chain oligomerisation K01955 - 6.3.5.5 0.0 1418.0
BYDH3_k127_1749791_1 Belongs to the CarA family K01956 GO:0000050,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005951,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0019627,GO:0019752,GO:0032991,GO:0034641,GO:0040007,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494 6.3.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009652 360.0
BYDH3_k127_1749791_2 Putative regulatory protein - - - 0.0000000000000000000000000000000000004715 141.0
BYDH3_k127_1749791_3 carbon starvation protein CstA K06200 - - 0.000000000000001264 78.0
BYDH3_k127_1750492_0 type II and III secretion system protein K12282 - - 0.0000000000000000000000000000000000000000000000000000000000001699 229.0
BYDH3_k127_1750492_1 TIGRFAM type IV pilus assembly protein PilM K02662 - - 0.0001428 50.0
BYDH3_k127_1750492_2 - K12281 - - 0.0004557 49.0
BYDH3_k127_1888284_0 2-hydroxyglutaryl-CoA dehydratase, D-component K04112 - 1.3.7.8 6.589e-214 668.0
BYDH3_k127_1888284_1 Cation transporter/ATPase, N-terminus K01537 - 3.6.3.8 8.584e-214 672.0
BYDH3_k127_1888284_2 2-hydroxyglutaryl-CoA dehydratase, D-component - - - 3.845e-199 622.0
BYDH3_k127_1904169_0 DNA internalization-related competence protein ComEC Rec2 K02238 - - 4.645e-278 873.0
BYDH3_k127_1904169_1 molybdopterin binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005076 521.0
BYDH3_k127_1904169_10 MobA-like NTP transferase domain K07141 - 2.7.7.76 0.0000000000000000000000001071 114.0
BYDH3_k127_1904169_11 Domain of unknown function (DUF1858) - - - 0.0000000000000000000271 91.0
BYDH3_k127_1904169_12 Allergen V5 Tpx-1 family protein K06182,K08372,K12065,K12685,K16785,K16786,K16787 - 5.4.99.21 0.00000000003701 77.0
BYDH3_k127_1904169_2 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086,K03089 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003892 491.0
BYDH3_k127_1904169_3 XdhC and CoxI family K07402 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001955 401.0
BYDH3_k127_1904169_4 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K07402 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000523 384.0
BYDH3_k127_1904169_5 Cytochrome C biogenesis protein K06196 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003312 364.0
BYDH3_k127_1904169_6 Ppx/GppA phosphatase family K01524 - 3.6.1.11,3.6.1.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001923 332.0
BYDH3_k127_1904169_7 Histone deacetylase domain - - - 0.00000000000000000000000000000000000000000000000000000005424 203.0
BYDH3_k127_1904169_8 Domain of unknown function (DUF5122) beta-propeller - - - 0.0000000000000000000000000000000000000000005931 180.0
BYDH3_k127_1904169_9 AMMECR1 K09141 - - 0.0000000000000000000000000000000000001509 141.0
BYDH3_k127_1947401_0 Molecular chaperone. Has ATPase activity K04079 - - 1.09e-321 993.0
BYDH3_k127_1947401_1 Thi4 family K00313 - - 6.55e-203 636.0
BYDH3_k127_1947401_2 Ion channel K10716 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005261 281.0
BYDH3_k127_1947401_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000007067 260.0
BYDH3_k127_1947401_4 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000007772 233.0
BYDH3_k127_1947401_5 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S K03855 - - 0.00000000000000000000000000000000000000000000000001077 180.0
BYDH3_k127_1947401_6 Is involved in the reduction of 2,3- digeranylgeranylglycerophospholipids (unsaturated archaeols) into 2,3-diphytanylglycerophospholipids (saturated archaeols) in the biosynthesis of archaeal membrane lipids. Catalyzes the formation of archaetidic acid (2,3-di-O-phytanyl-sn-glyceryl phosphate) from 2,3-di-O-geranylgeranylglyceryl phosphate (DGGGP) via the hydrogenation of each double bond of the isoprenoid chains K17830 - 1.3.1.101,1.3.7.11 0.00000000000000000000001162 113.0
BYDH3_k127_1947401_7 - - - - 0.000000000002485 68.0
BYDH3_k127_1998615_0 PFAM natural resistance-associated macrophage protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002795 437.0
BYDH3_k127_1998615_1 TIGRFAM Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 GO:0000105,GO:0000162,GO:0003674,GO:0003824,GO:0003949,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006547,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001526 381.0
BYDH3_k127_1998615_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000007926 222.0
BYDH3_k127_1998615_3 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 - - 0.00000000000000000000000000000000000000000000000000000000004529 208.0
BYDH3_k127_2017522_0 Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family K01486 - 3.5.4.2 3.348e-257 804.0
BYDH3_k127_2017522_1 Sulphur oxygenase reductase K16952 - 1.13.11.55 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004868 508.0
BYDH3_k127_2017522_10 - - - - 0.00000000000000006602 89.0
BYDH3_k127_2017522_11 - - - - 0.000002304 49.0
BYDH3_k127_2017522_2 response regulator receiver K10943 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008987 448.0
BYDH3_k127_2017522_3 Glycerol-3-phosphate acyltransferase K08591 - 2.3.1.15 0.0000000000000000000000000000000000000000000000000000000000000000002356 234.0
BYDH3_k127_2017522_4 Pyridoxamine 5'-phosphate oxidase K07005 - - 0.00000000000000000000000000000000000000000000005106 175.0
BYDH3_k127_2017522_5 PFAM ATP-binding region, ATPase domain protein K07709 - 2.7.13.3 0.0000000000000000000000000000000000000000001216 175.0
BYDH3_k127_2017522_6 - K07566 - 2.7.7.87 0.0000000000000000000000000000000000001036 149.0
BYDH3_k127_2017522_7 Belongs to the bacterial ribosomal protein bL28 family K02902 GO:0003674,GO:0003735,GO:0005198 - 0.000000000000000000000000000004492 119.0
BYDH3_k127_2017522_8 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 0.00000000000000000000000000003734 116.0
BYDH3_k127_2017522_9 protein complex oligomerization - - - 0.000000000000000000000000004104 118.0
BYDH3_k127_2018447_0 helicase superfamily c-terminal domain K05592 - 3.6.4.13 1.09e-247 770.0
BYDH3_k127_2018447_1 binding domain, Protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005088 287.0
BYDH3_k127_2018447_2 PFAM Sulphatase-modifying factor - - - 0.000000000000000000000000000000000000000000000000000000000000008375 227.0
BYDH3_k127_2018447_3 Protein of unknown function (DUF1566) - - - 0.0000000000000000000000000000000000000000000000000000001629 218.0
BYDH3_k127_2018447_4 PFAM Hemerythrin HHE cation binding domain K07216 - - 0.000000000000000000000000000001996 126.0
BYDH3_k127_2018447_5 histidine kinase A domain protein - - - 0.00000000001645 68.0
BYDH3_k127_2062339_0 domain protein K03455 - - 5.832e-250 792.0
BYDH3_k127_2062339_1 Acyl-CoA dehydrogenase, C-terminal domain K16173 - 1.3.99.32 4.581e-224 698.0
BYDH3_k127_2062339_10 Staphylococcal nuclease homologues - - - 0.000000000000000002741 86.0
BYDH3_k127_2062339_2 Belongs to the thiolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009153 587.0
BYDH3_k127_2062339_3 RmuC family K09760 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001299 588.0
BYDH3_k127_2062339_4 PFAM ATPase, BadF BadG BcrA BcrD type - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003224 465.0
BYDH3_k127_2062339_5 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001865 443.0
BYDH3_k127_2062339_6 Enoyl-CoA hydratase/isomerase K01692,K01715 - 4.2.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002366 428.0
BYDH3_k127_2062339_7 PFAM 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K00074 - 1.1.1.157 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003122 412.0
BYDH3_k127_2062339_8 Glycine cleavage H-protein - - - 0.00000000000000000000000000008275 116.0
BYDH3_k127_2062339_9 DNA repair enzyme involved in the repair of deaminated bases. Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA K05982 - 3.1.21.7 0.000000000000000001754 91.0
BYDH3_k127_2101965_0 PFAM magnesium chelatase K07391 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001071 561.0
BYDH3_k127_2101965_1 PFAM Nucleotidyl transferase K00971 - 2.7.7.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005119 483.0
BYDH3_k127_2101965_2 Sir2 family K12410 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004989 419.0
BYDH3_k127_2101965_3 PFAM Peptidase family S58 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001784 311.0
BYDH3_k127_2101965_4 PFAM Peptidase family S58 - - - 0.000000000000000000000000000000000000000000005872 163.0
BYDH3_k127_2117005_0 AMP-binding enzyme C-terminal domain K01912 - 6.2.1.30 4.85e-281 865.0
BYDH3_k127_2117005_1 PEP-utilising enzyme, mobile domain K01007 - 2.7.9.2 1.824e-227 717.0
BYDH3_k127_2117005_2 aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002488 543.0
BYDH3_k127_2117005_3 Uncharacterised protein family (UPF0261) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003712 434.0
BYDH3_k127_2117005_4 Pyruvate phosphate dikinase, PEP/pyruvate binding domain K01007 - 2.7.9.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006349 371.0
BYDH3_k127_2117005_5 - - - - 0.0000000000000000000000000000000000000000000000000000000002117 210.0
BYDH3_k127_2117005_6 heme oxygenase (decyclizing) activity K21481 - 1.14.99.57 0.0000000000000000000000000000000000000000001845 160.0
BYDH3_k127_2117005_7 Transglutaminase-like superfamily - - - 0.0000000000000000000001913 100.0
BYDH3_k127_2126770_0 PFAM Type II IV secretion system protein K02669 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003303 532.0
BYDH3_k127_2126770_1 Creatinase/Prolidase N-terminal domain K01262,K01271 - 3.4.11.9,3.4.13.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001236 492.0
BYDH3_k127_2126770_2 Type II/IV secretion system protein K02669 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005389 362.0
BYDH3_k127_2126770_3 Thymidylate synthase complementing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003115 279.0
BYDH3_k127_2126770_4 domain protein - - - 0.00000000000000006237 92.0
BYDH3_k127_2126770_5 - - - - 0.00000000006855 69.0
BYDH3_k127_2247695_0 PFAM FAD linked oxidase domain protein K00104 - 1.1.3.15 9.791e-246 765.0
BYDH3_k127_2247695_1 PFAM Binding-protein-dependent transport system inner membrane component K02034 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003579 479.0
BYDH3_k127_2247695_2 Squalene--hopene cyclase K06045 - 4.2.1.129,5.4.99.17 0.00000000001964 75.0
BYDH3_k127_2247695_3 phytol kinase activity - - - 0.000000001078 61.0
BYDH3_k127_2324046_0 Acetyl-CoA carboxylase carboxyltransferase component (subunits alpha and beta) K01615 - 4.1.1.70 0.0 1009.0
BYDH3_k127_2324046_1 Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor K00833 - 2.6.1.62 1.498e-243 757.0
BYDH3_k127_2324046_2 Aminotransferase class I and II K00639,K00652 - 2.3.1.29,2.3.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003753 577.0
BYDH3_k127_2400981_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 0.0 1245.0
BYDH3_k127_2400981_1 DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity K03581 - 3.1.11.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005997 452.0
BYDH3_k127_2400981_2 phosphorelay signal transduction system K01768,K19622 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004701 291.0
BYDH3_k127_2413286_0 Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties K00688 - 2.4.1.1 1.776e-229 719.0
BYDH3_k127_2413286_1 Belongs to the phosphofructokinase type A (PFKA) family. PPi-dependent PFK group II subfamily. Atypical ATP- dependent clade X sub-subfamily K00850 - 2.7.1.11 4.333e-194 613.0
BYDH3_k127_2413286_2 Carbohydrate phosphorylase K00688 GO:0000272,GO:0003674,GO:0003824,GO:0004645,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0005976,GO:0005977,GO:0005980,GO:0006073,GO:0006091,GO:0006112,GO:0008144,GO:0008150,GO:0008152,GO:0008184,GO:0009056,GO:0009057,GO:0009251,GO:0009987,GO:0015980,GO:0016052,GO:0016740,GO:0016757,GO:0016758,GO:0019842,GO:0030170,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044247,GO:0044248,GO:0044260,GO:0044262,GO:0044264,GO:0044275,GO:0044424,GO:0044464,GO:0048037,GO:0050662,GO:0055114,GO:0070279,GO:0071704,GO:0097159,GO:1901363,GO:1901575 2.4.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006927 496.0
BYDH3_k127_2413286_3 Belongs to the glycosyl hydrolase 13 family K01214 - 3.2.1.68 0.0000000000000000000000000000000000000000000000000000000105 203.0
BYDH3_k127_2413286_4 Phospholipase D. Active site motifs. K06132 - - 0.00000000000000000000000000000000000000000000000000000001161 205.0
BYDH3_k127_2413286_5 META domain K03929 - - 0.0000000000000000000000000000006908 128.0
BYDH3_k127_2435675_0 Peptidase family M48 K03799 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005496 398.0
BYDH3_k127_2435675_1 eRF1 domain 3 - - - 0.00000000000000003621 93.0
BYDH3_k127_2435675_2 Histidine kinase - - - 0.000000000000009139 81.0
BYDH3_k127_2435675_3 Integral membrane protein TerC family - - - 0.00000000000004158 74.0
BYDH3_k127_2435675_4 - - - - 0.0000000000005176 70.0
BYDH3_k127_2463730_0 Aldehyde ferredoxin oxidoreductase, N-terminal domain K03738,K19515 - 1.2.7.5 0.0 1124.0
BYDH3_k127_2463730_1 PFAM fumarate reductase succinate dehydrogenase flavoprotein domain protein K00244 - 1.3.5.4 1.589e-257 806.0
BYDH3_k127_2463730_2 4 iron, 4 sulfur cluster binding K03522,K13795,K15511,K19516 - 1.14.13.208 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005304 278.0
BYDH3_k127_2463730_3 lactate metabolic process - - - 0.00000000000003301 72.0
BYDH3_k127_2463730_4 PFAM Major Facilitator Superfamily - - - 0.0000000004006 64.0
BYDH3_k127_2554093_0 Two component, sigma54 specific, transcriptional regulator, Fis family - - - 2.642e-279 863.0
BYDH3_k127_2554093_1 Flagellar M-ring protein C-terminal K02409 - - 2.506e-268 833.0
BYDH3_k127_2554093_10 Flagellar hook capping protein - N-terminal region K02389 - - 0.0000000000000000000000000000000000000000000000000000000001156 209.0
BYDH3_k127_2554093_11 bacterial-type flagellum-dependent cell motility K02387 - - 0.000000000000000000000000000000000000000000000001581 175.0
BYDH3_k127_2554093_13 Cache_2 - - - 0.00000000000000000000000000000000000000000003628 166.0
BYDH3_k127_2554093_14 Flagellar hook-basal body complex protein FliE K02408 - - 0.0000000000000000000000000000005321 125.0
BYDH3_k127_2554093_15 Flagellar assembly protein FliH K02411 - - 0.00000000000002394 81.0
BYDH3_k127_2554093_2 ATP synthase alpha/beta family, nucleotide-binding domain K02412,K03224 - 3.6.3.14 1.842e-252 782.0
BYDH3_k127_2554093_3 ATPase family associated with various cellular activities (AAA) K10943 - - 3.384e-240 746.0
BYDH3_k127_2554093_4 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002296 540.0
BYDH3_k127_2554093_5 FliG middle domain K02410 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001407 499.0
BYDH3_k127_2554093_6 Pfam:Cache_2 K03406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008325 355.0
BYDH3_k127_2554093_7 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002977 329.0
BYDH3_k127_2554093_8 Flagella basal body rod protein K02388 - - 0.000000000000000000000000000000000000000000000000000000000000000000003543 237.0
BYDH3_k127_2555861_0 Belongs to the glycosyl hydrolase 57 family - - - 0.0 1090.0
BYDH3_k127_2555861_1 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 8.367e-286 883.0
BYDH3_k127_2555861_10 Single cache domain 3 K03406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002011 317.0
BYDH3_k127_2555861_11 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001392 283.0
BYDH3_k127_2555861_12 Scavenger mRNA decapping enzyme C-term binding K19710 - 2.7.7.53 0.0000000000000000000000000000000000000000000000000000000000000000000000000001793 258.0
BYDH3_k127_2555861_13 Calcineurin-like phosphoesterase superfamily domain K07095 - - 0.000000000000000000000000000000000000000000000000000000000000000001736 230.0
BYDH3_k127_2555861_16 transcriptional regulator containing an HTH domain fused to a Zn-ribbon K07743 - - 0.000000000000000000000000000000000000005267 147.0
BYDH3_k127_2555861_17 PFAM purine or other phosphorylase family 1 - - - 0.000000000000000000000005208 111.0
BYDH3_k127_2555861_2 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 5.897e-247 766.0
BYDH3_k127_2555861_3 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001109 607.0
BYDH3_k127_2555861_4 HDOD domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004922 516.0
BYDH3_k127_2555861_5 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003119 488.0
BYDH3_k127_2555861_6 HDOD domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002018 450.0
BYDH3_k127_2555861_7 Na dependent nucleoside transporter K03317 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009166 401.0
BYDH3_k127_2555861_8 HNH endonuclease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007701 326.0
BYDH3_k127_2555861_9 Disulfide bond isomerase protein N-terminus K03981 - 5.3.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008917 327.0
BYDH3_k127_255909_0 Tripartite ATP-independent periplasmic transporter, DctM component - - - 2.705e-229 715.0
BYDH3_k127_255909_1 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B K02823 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006931 355.0
BYDH3_k127_255909_2 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.00000000000000000000000000000000000000000000000000000000000000000000000000003309 262.0
BYDH3_k127_255909_3 Bacterial extracellular solute-binding protein, family 7 - - - 0.0000000000000000000000000000000000000000000000000000002034 196.0
BYDH3_k127_255909_4 FR47-like protein K03789 - 2.3.1.128 0.000000000000000000000000000000000000000000000000000009009 194.0
BYDH3_k127_255909_5 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.000000000000000000000000000000000000000005464 159.0
BYDH3_k127_255909_6 Catalyzes the conversion of dihydroorotate to orotate K00254,K02823,K17828 GO:0003674,GO:0003824,GO:0004152,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006206,GO:0006207,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016491,GO:0016627,GO:0016635,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019856,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046112,GO:0046390,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 1.3.1.14,1.3.5.2 0.00000000103 61.0
BYDH3_k127_2633681_0 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001593 589.0
BYDH3_k127_2633681_1 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003701 511.0
BYDH3_k127_2633681_2 Electron transfer flavoprotein FAD-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004106 481.0
BYDH3_k127_2633681_3 Electron transfer flavoprotein domain K03521 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001463 397.0
BYDH3_k127_2633681_4 Thi4 family K00313 - - 0.0000000000000000000000000000000002475 133.0
BYDH3_k127_2647408_0 it plays a direct role in the translocation of protons across the membrane K02108 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0005887,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016021,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0031224,GO:0031226,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0042777,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003064 371.0
BYDH3_k127_2647408_1 NapC/NirT cytochrome c family, N-terminal region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002286 316.0
BYDH3_k127_2647408_2 SMART AAA ATPase K02450 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001822 284.0
BYDH3_k127_2647408_5 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.00000000000000000000000000000000000006307 144.0
BYDH3_k127_2647408_6 Protein of unknown function (DUF1566) - - - 0.000000000000000000000000000000022 143.0
BYDH3_k127_2647408_7 function for this protein is to guide the assembly of the membrane sector of the ATPase enzyme complex K02116 - - 0.0000000001875 64.0
BYDH3_k127_2654382_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 2.964e-302 930.0
BYDH3_k127_2654382_1 TIGRFAM Acetoacetyl-CoA synthase K01907 - 6.2.1.16 3.314e-293 912.0
BYDH3_k127_2654382_10 Domain in cystathionine beta-synthase and other proteins. K04767 - - 0.00000000000000000000000000000000000000000000000000000000000005372 220.0
BYDH3_k127_2654382_11 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045260,GO:0045263,GO:0045264,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098797,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.000000000000000000000000000000000000000000000000005748 184.0
BYDH3_k127_2654382_12 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016469,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0032991,GO:0033178,GO:0034220,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0045259,GO:0045261,GO:0046034,GO:0046390,GO:0046483,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.0000000000000000000000000000000000000000000001063 171.0
BYDH3_k127_2654382_13 Domain of unknown function (DUF362) - - - 0.00000000000000000000000000000000000000000000684 183.0
BYDH3_k127_2654382_14 PFAM Branched-chain amino acid transport system permease component K01997,K01998 - - 0.000000000000000000000000000000000000000002295 162.0
BYDH3_k127_2654382_2 TIGRFAM acetyl coenzyme A synthetase (ADP forming), alpha domain - - - 5.262e-281 875.0
BYDH3_k127_2654382_3 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 2.259e-248 772.0
BYDH3_k127_2654382_4 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005972 469.0
BYDH3_k127_2654382_5 Isochorismatase family K08281 - 3.5.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001577 319.0
BYDH3_k127_2654382_6 PFAM ABC transporter K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000342 287.0
BYDH3_k127_2654382_7 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004399 270.0
BYDH3_k127_2654382_8 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004515 270.0
BYDH3_k127_2654382_9 ABC transporter K01995 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003164 259.0
BYDH3_k127_267210_0 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 - 3.3.1.1 2.028e-256 795.0
BYDH3_k127_267210_1 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 GO:0003674,GO:0003824,GO:0004478,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016740,GO:0016765,GO:0044424,GO:0044444,GO:0044464 2.5.1.6 1.079e-219 685.0
BYDH3_k127_267210_10 HPr Serine kinase C-terminal domain K06023 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000000000236 115.0
BYDH3_k127_267210_2 PFAM PfkB domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001134 519.0
BYDH3_k127_267210_3 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K08483 - 2.7.3.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004255 532.0
BYDH3_k127_267210_4 Displays ATPase and GTPase activities K06958 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001717 441.0
BYDH3_k127_267210_5 HPr Serine kinase C-terminal domain K06023 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001341 422.0
BYDH3_k127_267210_6 Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase K05808 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004271 305.0
BYDH3_k127_267210_7 PFAM phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K02806 - - 0.00000000000000000000000000000000000000000000000000000000000000000002606 235.0
BYDH3_k127_267210_8 PTS system fructose IIA component K02793 - 2.7.1.191 0.00000000000000000000000000000000000000000000000000000000000001085 219.0
BYDH3_k127_267210_9 PTS HPr component phosphorylation site K11189 - - 0.00000000000000000000000000000000000000000002856 161.0
BYDH3_k127_2673090_0 Bacterial regulatory protein, Fis family - - - 2.164e-244 759.0
BYDH3_k127_2673090_1 His Kinase A (phosphoacceptor) domain - - - 3.147e-215 679.0
BYDH3_k127_2673090_2 PFAM Aminotransferase class I and II - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001014 560.0
BYDH3_k127_2673090_3 sensor histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002346 505.0
BYDH3_k127_2673090_5 Protein of unknown function (DUF2934) - - - 0.0000000000000000004776 89.0
BYDH3_k127_2673090_6 Glycine zipper 2TM domain - - - 0.000000000001937 69.0
BYDH3_k127_2673495_0 PFAM Extracellular ligand-binding receptor K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001392 554.0
BYDH3_k127_2673495_1 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001877 522.0
BYDH3_k127_2673495_2 Sulphur transport K07112 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004867 477.0
BYDH3_k127_2673495_3 Allophanate hydrolase subunit 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009205 461.0
BYDH3_k127_2673495_4 Belongs to the UPF0271 (lamB) family K07160 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001673 397.0
BYDH3_k127_2673495_5 Allophanate hydrolase subunit 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008007 338.0
BYDH3_k127_2673495_6 Transglycosylase SLT domain K08309 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005011 268.0
BYDH3_k127_2673495_7 LysE type translocator - - - 0.000000000000000000001935 94.0
BYDH3_k127_2673495_8 Belongs to the binding-protein-dependent transport system permease family K01997,K01999 - - 0.00000000000000000002215 93.0
BYDH3_k127_2673495_9 DsrE/DsrF-like family K04085 - - 0.00000000000005211 74.0
BYDH3_k127_2689300_0 Heat shock 70 kDa protein K04043 - - 4.785e-264 816.0
BYDH3_k127_2689300_1 ABC 3 transport family K09816 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001168 398.0
BYDH3_k127_2689300_2 AAA domain, putative AbiEii toxin, Type IV TA system K09817 - - 0.000000000000000000000000000000000000003917 146.0
BYDH3_k127_2722558_0 Conserved carboxylase domain K01571,K01960,K03416 - 2.1.3.1,4.1.1.3,6.4.1.1 1.786e-247 769.0
BYDH3_k127_2722558_1 4Fe-4S dicluster domain - - - 3.712e-214 684.0
BYDH3_k127_2722558_2 Uncharacterised MFS-type transporter YbfB - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002141 610.0
BYDH3_k127_2722558_3 Memo-like protein K06990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004824 544.0
BYDH3_k127_2722558_4 electron transfer flavoprotein, alpha subunit K03522 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003496 483.0
BYDH3_k127_2722558_5 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003354 436.0
BYDH3_k127_2722558_6 PFAM Electron transfer flavoprotein alpha beta-subunit K03521 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001927 325.0
BYDH3_k127_2722558_7 Uncharacterised protein family UPF0047 - - - 0.00000000000000000000000000000000000000000000000000000000000000002679 226.0
BYDH3_k127_2722558_8 RadC-like JAB domain K03630 - - 0.0000000000000000000000000000000000000000000000000000000101 201.0
BYDH3_k127_2734901_0 DHH family K07462 - - 5.385e-233 732.0
BYDH3_k127_2734901_1 Catalyzes the conversion of dihydroorotate to orotate K00254,K02823,K17828 GO:0003674,GO:0003824,GO:0004152,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006206,GO:0006207,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016491,GO:0016627,GO:0016635,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019856,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046112,GO:0046390,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 1.3.1.14,1.3.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002345 443.0
BYDH3_k127_2734901_2 2-oxoacid ferredoxin oxidoreductase, alpha subunit K00169,K19070 GO:0003674,GO:0003824,GO:0006082,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0016054,GO:0016491,GO:0016625,GO:0016903,GO:0019752,GO:0033609,GO:0033611,GO:0043436,GO:0043648,GO:0043649,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0046395,GO:0055114,GO:0071704,GO:1901575 1.2.7.1,1.2.7.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000136 389.0
BYDH3_k127_2734901_3 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005897 398.0
BYDH3_k127_2734901_4 PFAM Thiamine pyrophosphate K00170,K00187 - 1.2.7.1,1.2.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005959 328.0
BYDH3_k127_2734901_5 Regulatory protein GntR HTH - - - 0.000000000000000000000000000000000000000000000000000000000000000000008283 241.0
BYDH3_k127_2734901_6 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.00000000000000000000000000000000000000000000002294 176.0
BYDH3_k127_2734901_7 Pyruvate ferredoxin/flavodoxin oxidoreductase K00172 - 1.2.7.1 0.00000000000000000000000000000000000001248 151.0
BYDH3_k127_2734901_8 Trap-type c4-dicarboxylate transport system, small permease component K11689 - - 0.0000000000000008323 83.0
BYDH3_k127_2734901_9 Catalyzes the conversion of dihydroorotate to orotate K00254,K02823,K17828 GO:0003674,GO:0003824,GO:0004152,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006206,GO:0006207,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016491,GO:0016627,GO:0016635,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019856,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046112,GO:0046390,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 1.3.1.14,1.3.5.2 0.0000000000009274 67.0
BYDH3_k127_2772859_0 Biotin and Thiamin Synthesis associated domain K03150 - 4.1.99.19 1.206e-194 617.0
BYDH3_k127_2772859_1 Deoxyribodipyrimidine photo-lyase-related protein K06876 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001296 469.0
BYDH3_k127_2772859_2 PFAM Bile acid sodium symporter K03453 - - 0.00000000000000000000000000000000000000000000000000000000000000000009216 242.0
BYDH3_k127_2772859_3 cyclic nucleotide binding K10914 - - 0.000000000000000000000000000000000000000009398 160.0
BYDH3_k127_2772859_4 Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway K00852,K00856,K10710,K22026 - 2.7.1.15,2.7.1.20,2.7.1.213,2.7.1.218,2.7.1.73 0.00000000000000000000000000003526 117.0
BYDH3_k127_2772859_5 Transcriptional regulator - - - 0.000000000000000000000004229 103.0
BYDH3_k127_286074_0 Nitrate reductase gamma subunit - - - 0.0 1164.0
BYDH3_k127_286074_1 efflux transmembrane transporter activity - - - 3.453e-204 644.0
BYDH3_k127_286074_10 Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides K02003,K05685 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002158 398.0
BYDH3_k127_286074_11 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000476 347.0
BYDH3_k127_286074_12 Histidine kinase K02482 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007278 315.0
BYDH3_k127_286074_14 Ribosomal protein L11 methyltransferase (PrmA) K15460 - 2.1.1.223 0.0000000000000000000000000000009335 122.0
BYDH3_k127_286074_15 Putative RNA methylase family UPF0020 K15460 - 2.1.1.223 0.000000000000000000000000001253 118.0
BYDH3_k127_286074_2 ABC-type antimicrobial peptide transport system, permease component K02004 - - 3.104e-195 615.0
BYDH3_k127_286074_3 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005563 599.0
BYDH3_k127_286074_4 Protein of unknown function (DUF1015) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004806 571.0
BYDH3_k127_286074_5 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005,K13888 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008807 557.0
BYDH3_k127_286074_6 Belongs to the FPP GGPP synthase family K02523,K13789 - 2.5.1.1,2.5.1.10,2.5.1.29,2.5.1.90 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000691 503.0
BYDH3_k127_286074_7 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000054 479.0
BYDH3_k127_286074_8 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001158 451.0
BYDH3_k127_286074_9 NlpC/P60 family K19223 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000625 424.0
BYDH3_k127_2939185_0 Pyruvate:ferredoxin oxidoreductase core domain II K00174,K00186 - 1.2.7.11,1.2.7.3,1.2.7.7 3.669e-206 644.0
BYDH3_k127_2939185_1 Glycosyl transferase 4-like domain K02844 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001217 574.0
BYDH3_k127_2939185_10 COG0559 Branched-chain amino acid ABC-type transport system, permease components K01997 - - 0.000000000000000000000000000000000000000000000000000000000000004033 226.0
BYDH3_k127_2939185_12 PFAM Pyruvate ketoisovalerate oxidoreductase K00177 - 1.2.7.3 0.00000000000000000000000000000000000000000000003485 177.0
BYDH3_k127_2939185_13 ABC transporter - - - 0.0000000000000000000000000000000000000000006324 162.0
BYDH3_k127_2939185_14 4Fe-4S binding domain K00176 - 1.2.7.3 0.0000000000000000000000000000000001313 133.0
BYDH3_k127_2939185_15 Undecaprenyl-phosphate galactose phosphotransferase - - - 0.000000000009097 72.0
BYDH3_k127_2939185_16 PFAM Methyltransferase type - - - 0.0000001354 61.0
BYDH3_k127_2939185_2 Sigma-54 interaction domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004461 570.0
BYDH3_k127_2939185_3 transferase activity, transferring glycosyl groups K00754 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001065 497.0
BYDH3_k127_2939185_4 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K00175 - 1.2.7.11,1.2.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007019 462.0
BYDH3_k127_2939185_5 Cytochrome C biogenesis protein transmembrane region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007277 301.0
BYDH3_k127_2939185_6 ACT domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004927 265.0
BYDH3_k127_2939185_7 phosphatase activity K05967 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004551 264.0
BYDH3_k127_2939185_8 PFAM Extracellular ligand-binding receptor K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000123 250.0
BYDH3_k127_2939185_9 Branched-chain amino acid transport system / permease component K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000003887 243.0
BYDH3_k127_2941851_0 NAD(P)-binding Rossmann-like domain - - - 0.0 1074.0
BYDH3_k127_2941851_1 COG1233 Phytoene dehydrogenase and related proteins - - - 6.332e-205 639.0
BYDH3_k127_2941851_2 LysR substrate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001179 364.0
BYDH3_k127_3012599_0 Cytochrome bd terminal oxidase subunit I K00425 - 1.10.3.14 1.01e-215 676.0
BYDH3_k127_3012599_1 TIGRFAM cytochrome d oxidase, subunit II (cydB) K00426 - 1.10.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002324 502.0
BYDH3_k127_3012599_2 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001226 402.0
BYDH3_k127_3012599_3 Desulfoferrodoxin, ferrous iron-binding K05919 - 1.15.1.2 0.0000000000000000000000000000000000000000000000000000000000003876 213.0
BYDH3_k127_3012599_4 Belongs to the Fur family K03711,K09825 - - 0.00000000000000000000000000000000000000000000000000005253 189.0
BYDH3_k127_3012599_5 Ferritin-like domain - GO:0003674,GO:0005488,GO:0005506,GO:0043167,GO:0043169,GO:0046872,GO:0046914 - 0.000000000000000000000000000000000000001829 147.0
BYDH3_k127_3012599_6 mttA/Hcf106 family K03116,K03117 - - 0.000000000000000000003841 97.0
BYDH3_k127_3012599_7 Rubredoxin - - - 0.00000000000002944 73.0
BYDH3_k127_3012599_8 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042,K11528 - 2.3.1.157,2.7.7.23 0.00000000000006467 72.0
BYDH3_k127_3057862_0 Pyridine nucleotide-disulphide oxidoreductase, dimerisation - - - 1.282e-245 764.0
BYDH3_k127_3057862_1 sister chromatid segregation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001067 515.0
BYDH3_k127_3057862_2 SBF-like CPA transporter family (DUF4137) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002419 449.0
BYDH3_k127_3057862_3 Sulphur transport K07112 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005322 284.0
BYDH3_k127_3057862_4 Sulphur transport K07112 - - 0.000000000000000000000000000000000000000000000000000000000000004502 218.0
BYDH3_k127_3057862_5 sister chromatid segregation - - - 0.0000000000000000000000000000000000000002957 153.0
BYDH3_k127_3057862_6 peroxiredoxin activity - - - 0.0000000000000000000000000000000000000007015 151.0
BYDH3_k127_3057862_7 Ferritin-like domain - GO:0003674,GO:0005488,GO:0005506,GO:0043167,GO:0043169,GO:0046872,GO:0046914 - 0.00000000000000000000000000001371 117.0
BYDH3_k127_3057862_8 Sulphur transport - - - 0.000000000000002472 75.0
BYDH3_k127_3098495_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 0.0 1241.0
BYDH3_k127_3098495_1 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 7.868e-261 805.0
BYDH3_k127_3098495_10 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.00000000000000000000000006711 107.0
BYDH3_k127_3098495_11 50S ribosomal protein L31 K02909 - - 0.00000000000000000000001888 100.0
BYDH3_k127_3098495_2 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 1.733e-230 718.0
BYDH3_k127_3098495_3 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003829 548.0
BYDH3_k127_3098495_4 ATP phosphoribosyltransferase K00765 GO:0000105,GO:0003674,GO:0003824,GO:0003879,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002074 534.0
BYDH3_k127_3098495_5 PFAM Imidazoleglycerol-phosphate dehydratase K01693 GO:0000105,GO:0003674,GO:0003824,GO:0004424,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.2.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005374 300.0
BYDH3_k127_3098495_6 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 - 1.1.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001235 293.0
BYDH3_k127_3098495_7 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 GO:0003674,GO:0003824,GO:0004140,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.1.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000495 261.0
BYDH3_k127_3098495_8 SNO glutamine amidotransferase family K02501 - - 0.0000000000000000000000000000000000000000000000000004275 186.0
BYDH3_k127_3098495_9 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 - 2.1.1.297 0.0000000000000000000000000000000000000000000004187 177.0
BYDH3_k127_3105132_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 0.0 1067.0
BYDH3_k127_3105132_1 Protein of unknown function (DUF763) K09003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000996 248.0
BYDH3_k127_3105132_2 - - - - 0.00000000000000000000000000000000000000000000000000000000003955 208.0
BYDH3_k127_3105132_3 aminopeptidase N - - - 0.000000000000000000000000000000000000000000000000000003658 201.0
BYDH3_k127_3105132_4 Involved in the biosynthesis of porphyrin-containing compound - - - 0.000000000000000000000000000000104 126.0
BYDH3_k127_3105132_5 Involved in the biosynthesis of porphyrin-containing compound - - - 0.0000000006119 60.0
BYDH3_k127_3135818_0 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 GO:0003674,GO:0003824,GO:0003909,GO:0003911,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016874,GO:0016886,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 6.5.1.2 0.0 1081.0
BYDH3_k127_3135818_1 Phosphorylase superfamily K00772 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004731,GO:0006082,GO:0006139,GO:0006144,GO:0006168,GO:0006520,GO:0006555,GO:0006725,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009112,GO:0009113,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0017061,GO:0017144,GO:0018130,GO:0019438,GO:0019509,GO:0019752,GO:0034641,GO:0034654,GO:0042440,GO:0043094,GO:0043096,GO:0043101,GO:0043102,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046083,GO:0046084,GO:0046112,GO:0046148,GO:0046394,GO:0046483,GO:0055086,GO:0071265,GO:0071267,GO:0071704,GO:0072521,GO:0072522,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.28 0.0000000000000000000000000000000000000000000000000000001634 199.0
BYDH3_k127_3135818_2 tRNA (Uracil-5-)-methyltransferase K03215 - 2.1.1.190 0.000000000000000000000000000000000001094 141.0
BYDH3_k127_3153851_0 MlaD protein K06192 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000507 393.0
BYDH3_k127_3153851_1 ABC-type transport system involved in resistance to organic solvents, ATPase component K02065 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007097 380.0
BYDH3_k127_3153851_2 ABC-type transport auxiliary lipoprotein component K09857 - - 0.0000000000000000000000000000000000005608 145.0
BYDH3_k127_3153851_3 23S rRNA-intervening sequence protein - - - 0.00003666 47.0
BYDH3_k127_3177420_0 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system K01547 - 3.6.3.12 0.0 1056.0
BYDH3_k127_3177420_1 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane K01546 GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0008150,GO:0008324,GO:0008556,GO:0009987,GO:0015075,GO:0015077,GO:0015079,GO:0015318,GO:0015399,GO:0015405,GO:0015662,GO:0015672,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0030001,GO:0030955,GO:0031420,GO:0034220,GO:0042623,GO:0042625,GO:0042626,GO:0043167,GO:0043169,GO:0043492,GO:0044464,GO:0046872,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0071804,GO:0071805,GO:0071944,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0099131,GO:0099132 3.6.3.12 4.521e-310 956.0
BYDH3_k127_3177420_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K11383 - 2.7.13.3 5.111e-282 878.0
BYDH3_k127_3177420_3 Osmosensitive K channel His kinase sensor K07646 - 2.7.13.3 2.887e-264 820.0
BYDH3_k127_3177420_4 PFAM response regulator receiver K11384 - - 3.09e-253 786.0
BYDH3_k127_3177420_5 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex K01548 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0008150,GO:0008324,GO:0008556,GO:0009987,GO:0015075,GO:0015077,GO:0015079,GO:0015318,GO:0015399,GO:0015405,GO:0015662,GO:0015672,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0030001,GO:0031224,GO:0034220,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044425,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0071804,GO:0071805,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0099131,GO:0099132 3.6.3.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006935 271.0
BYDH3_k127_3177420_6 TraB family K00657,K09973 - 2.3.1.57 0.0000000000000000000000000000000000000000000000000000000000000003991 229.0
BYDH3_k127_3177420_7 - - - - 0.0000000000000000000000000000000000000000000000000000000000000008486 231.0
BYDH3_k127_3177420_8 - - - - 0.000000000000000000000000000000002188 134.0
BYDH3_k127_3216741_0 Acyl-CoA reductase (LuxC) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002001 314.0
BYDH3_k127_3216741_1 Putative transposase of IS4/5 family (DUF4096) - - - 0.00000000000000000000000000000000000000000000007855 170.0
BYDH3_k127_3216741_2 Acyl-protein synthetase, LuxE - - - 0.0000000000000000000000000000000000000000000001961 182.0
BYDH3_k127_3255519_0 PFAM UvrD REP helicase K03657 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001796 532.0
BYDH3_k127_3255519_1 Beta-lactamase superfamily domain K17837 - 3.5.2.6 0.000000000000000000000000000000000000000000000000008433 181.0
BYDH3_k127_3369540_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 - 2.7.7.6 0.0 2601.0
BYDH3_k127_3369540_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.0 2505.0
BYDH3_k127_3369540_10 Involved in the TonB-independent uptake of proteins K03641 GO:0003674,GO:0005215,GO:0006810,GO:0008150,GO:0019534,GO:0022857,GO:0051179,GO:0051234,GO:0055085,GO:1901998 - 0.0000000000000000000000000009016 113.0
BYDH3_k127_3369540_11 P-P-bond-hydrolysis-driven protein transmembrane transporter activity K03073 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0008150,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0040007,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.000000000000000000000000001857 113.0
BYDH3_k127_3369540_12 Belongs to the bacterial ribosomal protein bL33 family K02913 - - 0.00000000000000000805 83.0
BYDH3_k127_3369540_13 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.000000000009107 64.0
BYDH3_k127_3369540_2 Involved in the TonB-independent uptake of proteins K03641 GO:0003674,GO:0005215,GO:0006810,GO:0008150,GO:0019534,GO:0022857,GO:0051179,GO:0051234,GO:0055085,GO:1901998 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005567 587.0
BYDH3_k127_3369540_3 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 GO:0000470,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022625,GO:0022626,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008072 417.0
BYDH3_k127_3369540_4 Participates in transcription elongation, termination and antitermination K02601 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006647 347.0
BYDH3_k127_3369540_5 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002125 292.0
BYDH3_k127_3369540_6 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003028 270.0
BYDH3_k127_3369540_7 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001313 260.0
BYDH3_k127_3369540_8 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.000000000000000000000000000000000000000000000000000000000000000008685 226.0
BYDH3_k127_3369540_9 OmpA family K03640 - - 0.000000000000000000000000000000000000000000000000000000000000001228 223.0
BYDH3_k127_3433343_0 PFAM UBA THIF-type NAD FAD binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002243 248.0
BYDH3_k127_3433343_1 HPP family - - - 0.000000000000000000000000000000000000000000000000000000000000001935 222.0
BYDH3_k127_3433343_2 Protein of unknown function (DUF541) K09797 - - 0.00000000000000000000000000000001094 135.0
BYDH3_k127_3433343_3 PFAM thiamineS protein - - - 0.000000000000000000001534 97.0
BYDH3_k127_3433567_0 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 2.568e-289 895.0
BYDH3_k127_3433567_1 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140101,GO:0140102,GO:1901360 2.1.1.192 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006123 524.0
BYDH3_k127_3433567_2 Transcription termination factor nusG - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002188 273.0
BYDH3_k127_3433567_3 PFAM major facilitator superfamily MFS_1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000006108 241.0
BYDH3_k127_3433567_4 Thioesterase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000005602 229.0
BYDH3_k127_3433567_5 histidine kinase A domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000003442 216.0
BYDH3_k127_3448478_0 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005112 470.0
BYDH3_k127_3448478_1 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K07644 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009867 331.0
BYDH3_k127_3454710_0 Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates K00179 - 1.2.7.8 9.978e-229 715.0
BYDH3_k127_3454710_1 Enoyl-CoA hydratase/isomerase K07539 GO:0003674,GO:0003824,GO:0006139,GO:0006163,GO:0006195,GO:0006637,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009150,GO:0009154,GO:0009166,GO:0009259,GO:0009261,GO:0009987,GO:0016787,GO:0016822,GO:0016823,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0033865,GO:0033869,GO:0033875,GO:0034031,GO:0034032,GO:0034034,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0035383,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044273,GO:0044281,GO:0044283,GO:0046434,GO:0046483,GO:0046700,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1901787,GO:1901788 3.7.1.21 1.851e-226 704.0
BYDH3_k127_3454710_2 Belongs to the ABC transporter superfamily K02031,K02032 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005106 573.0
BYDH3_k127_3454710_3 PFAM SAICAR synthetase K01923 GO:0003674,GO:0003824,GO:0004639,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001407 394.0
BYDH3_k127_3454710_4 Pyruvate ferredoxin/flavodoxin oxidoreductase K00180 - 1.2.7.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002463 316.0
BYDH3_k127_3454710_5 cheY-homologous receiver domain - - - 0.000000000000000000000000000005538 124.0
BYDH3_k127_3454710_6 Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates K00179 - 1.2.7.8 0.0000009366 52.0
BYDH3_k127_3473077_0 Hydantoinase/oxoprolinase N-terminal region K01473 - 3.5.2.14 3.966e-302 940.0
BYDH3_k127_3473077_1 Methylmalonyl-CoA mutase K01848 - 5.4.99.2 1.002e-258 806.0
BYDH3_k127_3473077_10 Endonuclease Exonuclease Phosphatase - - - 0.000000000001965 71.0
BYDH3_k127_3473077_2 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 8.278e-234 741.0
BYDH3_k127_3473077_3 Hydantoinase B/oxoprolinase K01474 - 3.5.2.14 1.344e-217 682.0
BYDH3_k127_3473077_4 TIGRFAM Tryptophanyl-tRNA synthetase K01867 - 6.1.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008445 587.0
BYDH3_k127_3473077_5 CoA-transferase family III - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003503 527.0
BYDH3_k127_3473077_6 Provides the (R)-glutamate required for cell wall biosynthesis K01776 - 5.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004397 477.0
BYDH3_k127_3473077_7 GntR family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001763 364.0
BYDH3_k127_3473077_8 ArgK protein K07588 - - 0.00000000000000000000000000000000000000000000000000000000000000000000655 244.0
BYDH3_k127_3473077_9 B12 binding domain K01849 - 5.4.99.2 0.000000000000000000000000000000000000000000000004158 175.0
BYDH3_k127_3527170_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 0.0 1043.0
BYDH3_k127_3527170_1 Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744 - - 3.875e-282 883.0
BYDH3_k127_3527170_2 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 GO:0005575,GO:0005622,GO:0005623,GO:0006950,GO:0006974,GO:0008150,GO:0009380,GO:0009987,GO:0032991,GO:0033554,GO:0044424,GO:0044464,GO:0050896,GO:0051716,GO:1902494,GO:1905347,GO:1905348,GO:1990391 - 6.617e-250 781.0
BYDH3_k127_3527170_3 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710 - 4.2.1.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008817 571.0
BYDH3_k127_3527170_4 Mur ligase, middle domain K11754 - 6.3.2.12,6.3.2.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004236 533.0
BYDH3_k127_3527170_5 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005719 504.0
BYDH3_k127_3527170_6 Nucleotidyl transferase K00973 - 2.7.7.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004179 366.0
BYDH3_k127_3527170_7 hydrolase of the alpha beta superfamily K07018 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002019 273.0
BYDH3_k127_3527170_8 dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes K01790 - 5.1.3.13 0.00000000000000000000000000000000000000000000000000000000002877 209.0
BYDH3_k127_3527170_9 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 0.00000000000002691 72.0
BYDH3_k127_3559683_0 Belongs to the IlvD Edd family K01687 - 4.2.1.9 9.4e-323 992.0
BYDH3_k127_3559683_1 FAD linked oxidase domain protein K00102,K00104 - 1.1.2.4,1.1.3.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003592 501.0
BYDH3_k127_3559683_2 Domain of unknown function (DUF362) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002288 467.0
BYDH3_k127_3559683_3 SMART Elongator protein 3 MiaB NifB - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002047 399.0
BYDH3_k127_3618043_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 0.0 1116.0
BYDH3_k127_3618043_1 DisA bacterial checkpoint controller nucleotide-binding K18672 - 2.7.7.85 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005549 391.0
BYDH3_k127_3618043_2 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008614,GO:0008615,GO:0009058,GO:0009110,GO:0009987,GO:0016740,GO:0016769,GO:0017144,GO:0018130,GO:0019438,GO:0033856,GO:0034641,GO:0042364,GO:0042816,GO:0042819,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072524,GO:0072525,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 2.6.99.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001496 352.0
BYDH3_k127_3618043_3 YbbR-like protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001119 285.0
BYDH3_k127_3618043_4 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796,K13941 - 2.5.1.15,2.7.6.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004549 272.0
BYDH3_k127_3618043_5 NADPH-dependent FMN reductase - - - 0.0000000000000000000000000000000000000000000000007932 185.0
BYDH3_k127_3618043_6 PFAM EAL domain protein - - - 0.000000126 56.0
BYDH3_k127_364170_0 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01950 - 6.3.5.1 1.233e-261 817.0
BYDH3_k127_364170_1 ANTAR - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004258 389.0
BYDH3_k127_364170_3 Sigma-70, region 4 K03088 - - 0.00002046 53.0
BYDH3_k127_3650830_0 CoA binding domain K01905,K09181,K22224 - 6.2.1.13 0.0 1160.0
BYDH3_k127_3650830_1 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086,K03089 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002065 253.0
BYDH3_k127_3650830_2 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086,K03089 - - 0.0000000000000000000000000000000000000873 145.0
BYDH3_k127_3665317_0 Uncharacterized protein conserved in bacteria (DUF2344) - - - 4.253e-267 828.0
BYDH3_k127_3665317_1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III K01840,K15778 - 5.4.2.2,5.4.2.8 1.938e-200 627.0
BYDH3_k127_3665317_2 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III K01840,K15778 - 5.4.2.2,5.4.2.8 0.00000000000000000000000000000000000000000008971 160.0
BYDH3_k127_368361_0 Tex-like protein N-terminal domain K06959 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004143 514.0
BYDH3_k127_368361_1 Class II aldolase adducin family protein K01628 - 4.1.2.17 0.0000000000000000000000000000000000000000000000000000000000000000000000001985 253.0
BYDH3_k127_368361_2 4Fe-4S binding domain - - - 0.0000000000000000000000000000000000000000000000001212 183.0
BYDH3_k127_368361_3 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) K00950 - 2.7.6.3 0.00000000000000000000000000000000000000000000002201 176.0
BYDH3_k127_3777258_0 AsmA-like C-terminal region - - - 0.0 1101.0
BYDH3_k127_3777258_1 Tetratricopeptide repeat - - - 1.952e-223 699.0
BYDH3_k127_3777258_10 RNA polymerase-binding protein DksA K06204 - - 0.0000000000000000000000000000000000000000000000000000000008766 202.0
BYDH3_k127_3777258_11 This protein binds to 23S rRNA in the presence of protein L20 K02888 GO:0003674,GO:0003735,GO:0005198 - 0.00000000000000000000000000000000000000000000000005012 181.0
BYDH3_k127_3777258_12 Domain of unknown function (DUF2520) - - - 0.000000000000000000000000000000000000000000001351 176.0
BYDH3_k127_3777258_13 Hsp20/alpha crystallin family K13993 - - 0.0000000000000000000000000000000000000000007169 162.0
BYDH3_k127_3777258_14 Hsp20/alpha crystallin family K13993 - - 0.00000000000000000000000000000000000001084 149.0
BYDH3_k127_3777258_15 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000000000000000000000000002562 138.0
BYDH3_k127_3777258_16 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.000000000000000000000000001021 116.0
BYDH3_k127_3777258_2 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate K00147 GO:0003674,GO:0003824,GO:0004350,GO:0008150,GO:0008152,GO:0016491,GO:0016620,GO:0016903,GO:0055114 1.2.1.41 5.889e-216 675.0
BYDH3_k127_3777258_3 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate K00931 GO:0003674,GO:0003824,GO:0004349,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006560,GO:0006561,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0018130,GO:0019202,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005478 578.0
BYDH3_k127_3777258_4 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000212 516.0
BYDH3_k127_3777258_5 NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form K12410 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003631 449.0
BYDH3_k127_3777258_6 Cation efflux family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001086 372.0
BYDH3_k127_3777258_7 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 GO:0000309,GO:0003674,GO:0003824,GO:0004515,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.7.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001679 288.0
BYDH3_k127_3777258_8 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004346 255.0
BYDH3_k127_3777258_9 PFAM Phosphoribosyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000006772 253.0
BYDH3_k127_3780006_0 Alginate O-acetylation protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003076 608.0
BYDH3_k127_3780006_1 - - - - 0.000000000000000000000000000000000000111 155.0
BYDH3_k127_3780006_2 SPFH domain-Band 7 family - - - 0.0000000000000000004564 87.0
BYDH3_k127_3780006_4 - - - - 0.000001045 50.0
BYDH3_k127_3789293_0 Diguanylate cyclase K21084 - 2.7.7.65 1.45e-279 875.0
BYDH3_k127_3789293_1 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004243 359.0
BYDH3_k127_3789293_2 Beta-lactamase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001402 330.0
BYDH3_k127_3789293_3 Belongs to the purine pyrimidine phosphoribosyltransferase family K00760 - 2.4.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000005458 264.0
BYDH3_k127_3789293_4 curli production assembly transport component CsgG - - - 0.0000000000000000000000000000000000000000000000000000000000000000001009 233.0
BYDH3_k127_3789293_5 response regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000001134 237.0
BYDH3_k127_3789293_6 Isochorismatase family - - - 0.0000000000000000000000000000000000000000000000000000000001243 209.0
BYDH3_k127_3841849_0 Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates K00179 - 1.2.7.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008701 315.0
BYDH3_k127_3962943_0 AMP-binding enzyme C-terminal domain - - - 1.266e-281 872.0
BYDH3_k127_3962943_1 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K08352 - 1.8.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008105 568.0
BYDH3_k127_3962943_2 Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates K00179 - 1.2.7.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002751 482.0
BYDH3_k127_3962943_3 Domain of Unknown Function (DUF748) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001303 380.0
BYDH3_k127_3962943_4 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001011 365.0
BYDH3_k127_3962943_5 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001992 275.0
BYDH3_k127_3962943_6 helix_turn_helix isocitrate lyase regulation - - - 0.000000000000000000000000000000000000000000000000000000000000000009544 235.0
BYDH3_k127_3962943_7 Cyclophilin-like K09143 - - 0.00000000000000000000000000000000000000000000002301 174.0
BYDH3_k127_4014855_0 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K00972 - 2.7.7.23,2.7.7.83 2.695e-209 656.0
BYDH3_k127_4014855_1 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007663 587.0
BYDH3_k127_4014855_2 PFAM NADPH-dependent FMN reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000476 308.0
BYDH3_k127_4014855_3 heat shock protein binding - - - 0.000000000000000000000000000000000000000000000000007681 185.0
BYDH3_k127_4014855_4 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 0.0000000002762 61.0
BYDH3_k127_40308_0 Receptor family ligand binding region K01999 - - 5.315e-234 729.0
BYDH3_k127_40308_1 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008037 585.0
BYDH3_k127_40308_2 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001162 276.0
BYDH3_k127_40308_3 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001606 257.0
BYDH3_k127_40308_4 Histone methylation protein DOT1 - - - 0.000000000000000000000000000000000000000000000003759 184.0
BYDH3_k127_40308_5 COG0411 ABC-type branched-chain amino acid transport systems, ATPase component - - - 0.00000000000000000000009296 100.0
BYDH3_k127_40308_6 diguanylate cyclase K13590 - 2.7.7.65 0.000001791 50.0
BYDH3_k127_4101763_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 2.7.7.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004614 599.0
BYDH3_k127_4101763_1 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006417,GO:0006450,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0015935,GO:0019222,GO:0019843,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032268,GO:0032270,GO:0032991,GO:0034248,GO:0034250,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0045727,GO:0045903,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0060255,GO:0065007,GO:0065008,GO:0080090,GO:0097159,GO:1901363,GO:1990904,GO:2000112 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000142 273.0
BYDH3_k127_4101763_2 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 GO:0000028,GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0016070,GO:0016072,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034622,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0048027,GO:0065003,GO:0070181,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000001059 248.0
BYDH3_k127_4101763_3 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022613,GO:0032991,GO:0034641,GO:0034645,GO:0042254,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000745 220.0
BYDH3_k127_4101763_4 PFAM ribosomal protein L17 K02879 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000001055 211.0
BYDH3_k127_4101763_5 - - - - 0.0000005188 54.0
BYDH3_k127_4158119_0 Integrase core domain K07497 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002325 373.0
BYDH3_k127_4158119_1 Transposase - - - 0.00000000000000000000000000000000000000001851 159.0
BYDH3_k127_4158119_2 - K07566 - 2.7.7.87 0.0000000000000000000000000000000000000001068 158.0
BYDH3_k127_4158119_3 Transposase - - - 0.00000000000000000000000000000000001531 137.0
BYDH3_k127_4158119_4 Transposase IS116/IS110/IS902 family - - - 0.00000001839 62.0
BYDH3_k127_4356575_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 GO:0003674,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.7 8.041e-253 790.0
BYDH3_k127_4356575_1 Crp-like helix-turn-helix domain K10914 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000601 373.0
BYDH3_k127_4356575_2 - - - - 0.00000000000000006875 82.0
BYDH3_k127_4440095_0 Cytochrome c554 and c-prime - - - 1.18e-316 985.0
BYDH3_k127_4440095_1 OmpA MotB K02557 - - 0.0000000000000000000000000000001272 131.0
BYDH3_k127_4440095_2 Sulfatase K01130 - 3.1.6.1 0.00000000000000000000000001103 112.0
BYDH3_k127_4441346_0 Putative modulator of DNA gyrase K03568 - - 6.582e-219 687.0
BYDH3_k127_4441346_1 TIGRFAM cell shape determining protein, MreB Mrl family K03569 - - 3.347e-206 644.0
BYDH3_k127_4441346_2 SurA N-terminal domain K03770 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005069 594.0
BYDH3_k127_4441346_3 Penicillin-binding protein, dimerisation domain K05515 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000437 567.0
BYDH3_k127_4441346_4 2-hydroxyglutaryl-CoA dehydratase, D-component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001907 511.0
BYDH3_k127_4441346_5 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 GO:0000408,GO:0002949,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070525,GO:0071704,GO:0090304,GO:1901360 2.3.1.234 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006789 483.0
BYDH3_k127_4441346_6 Involved in formation and maintenance of cell shape K03570 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001049 426.0
BYDH3_k127_4441346_7 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 GO:0000154,GO:0000179,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.182 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003765 303.0
BYDH3_k127_4474342_0 ATP synthase alpha/beta chain, C terminal domain K02111 - 3.6.3.14 1.176e-221 697.0
BYDH3_k127_4474342_1 ATP synthase K02115 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001701 292.0
BYDH3_k127_4474342_2 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000225 274.0
BYDH3_k127_4474342_3 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.00000000000000000000000000000000000000000000000000000000003597 214.0
BYDH3_k127_4474342_4 Histidine kinase K00936,K07315 - 2.7.13.3,3.1.3.3 0.0000000000000000000000000000000000000000000000000002797 199.0
BYDH3_k127_4474342_5 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 - - 0.00000000000000000000000000000000000309 138.0
BYDH3_k127_4474342_6 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter K02116 - - 0.000000000000000000000000002842 113.0
BYDH3_k127_4474342_7 N-ATPase, AtpR subunit - - - 0.0000000000000000007023 90.0
BYDH3_k127_4474342_8 Belongs to the adenylyl cyclase class-4 guanylyl cyclase family K01768 - 4.6.1.1 0.000000007853 67.0
BYDH3_k127_4579051_0 4fe-4S ferredoxin, iron-sulfur binding domain protein - - - 1.67e-266 830.0
BYDH3_k127_4579051_1 Nitronate monooxygenase K00459 - 1.13.12.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003399 529.0
BYDH3_k127_4579051_2 heterodisulfide reductase K03389 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002296 404.0
BYDH3_k127_4579051_3 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001472 402.0
BYDH3_k127_4579051_4 4Fe-4S dicluster domain K03390,K18930 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000005012 262.0
BYDH3_k127_4619579_0 Thermophilic metalloprotease (M29) K19689 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004773 607.0
BYDH3_k127_4619579_1 histidine kinase A domain protein - - - 0.000000000000000000000000000000000000000000000001519 189.0
BYDH3_k127_4619579_2 Carboxymuconolactone decarboxylase family - - - 0.000000000000000000000000000000000000003699 148.0
BYDH3_k127_4627630_0 TIGRFAM argininosuccinate lyase K01755 GO:0003674,GO:0003824,GO:0004056,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016829,GO:0016840,GO:0016842,GO:0019752,GO:0042450,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.3.2.1 5.377e-226 707.0
BYDH3_k127_4627630_1 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 3.72e-220 687.0
BYDH3_k127_4627630_10 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008311 353.0
BYDH3_k127_4627630_11 aminotransferase, class I and II K11358 - 2.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003741 339.0
BYDH3_k127_4627630_12 Belongs to the peptidase S16 family K01338,K04076 - 3.4.21.53 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003563 282.0
BYDH3_k127_4627630_13 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000001345 248.0
BYDH3_k127_4627630_14 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.00000000000000000000000000000000000000000000000000000000000000003072 224.0
BYDH3_k127_4627630_15 PFAM fumarate reductase succinate dehydrogenase flavoprotein - - - 0.0000000000000000000000000000000000000000000000000000000000000001301 243.0
BYDH3_k127_4627630_16 aminotransferase, class I and II K11358 - 2.6.1.1 0.000000000000000000000000000000000000000000000000000000000005563 213.0
BYDH3_k127_4627630_17 PFAM CutA1 divalent ion tolerance protein K03926 - - 0.000000000000000000000000000000000000002059 149.0
BYDH3_k127_4627630_2 aminotransferase, class I and II K11358 - 2.6.1.1 6.673e-195 613.0
BYDH3_k127_4627630_3 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000047 511.0
BYDH3_k127_4627630_4 Enoyl-(Acyl carrier protein) reductase K07547 - 1.1.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005897 435.0
BYDH3_k127_4627630_5 Modulates transcription in response to changes in cellular NADH NAD( ) redox state K01926 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006984 402.0
BYDH3_k127_4627630_6 Fibronectin type 3 domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006057 402.0
BYDH3_k127_4627630_7 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008839,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016627,GO:0016628,GO:0019752,GO:0019877,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576 1.17.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000189 395.0
BYDH3_k127_4627630_8 AAA domain K01935 - 6.3.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001258 374.0
BYDH3_k127_4627630_9 Maf-like protein K06287 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001687 353.0
BYDH3_k127_4712922_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K13598 - 2.7.13.3 2.357e-321 997.0
BYDH3_k127_4712922_1 Sigma-54 interaction domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003919 418.0
BYDH3_k127_4712922_2 Photosynthesis system II assembly factor YCF48 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001284 343.0
BYDH3_k127_4712922_3 Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene K03664 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001175 271.0
BYDH3_k127_4712922_4 Multi-copper polyphenol oxidoreductase laccase K05810 - - 0.0000000000000000000000000000000000000000000000000000000000000000001063 234.0
BYDH3_k127_4712922_5 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000008852 242.0
BYDH3_k127_4728054_0 PDZ domain (Also known as DHR or GLGF) K04771 - 3.4.21.107 1.047e-204 646.0
BYDH3_k127_4728054_1 DeoC/LacD family aldolase K08321 - 2.3.1.245 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001479 520.0
BYDH3_k127_4728054_10 - - - - 0.0000000000000000006543 89.0
BYDH3_k127_4728054_11 glutaredoxin-like protein, YruB-family - - - 0.00000000008652 64.0
BYDH3_k127_4728054_2 lyase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000558 363.0
BYDH3_k127_4728054_3 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family K13283 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002861 327.0
BYDH3_k127_4728054_4 cyclic diguanylate phosphodiesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003195 316.0
BYDH3_k127_4728054_5 Peptidase M16 domain protein K07263 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004813 298.0
BYDH3_k127_4728054_7 Alpha/beta hydrolase family K07020 - - 0.00000000000000000000000000000000000000000000000000002034 196.0
BYDH3_k127_4728054_8 Bacterial PH domain K08981 - - 0.000000000000000000000000000000000000000002819 159.0
BYDH3_k127_4728054_9 Cysteine-rich secretory protein family - - - 0.000000000000000000000000000000000000000005153 159.0
BYDH3_k127_4739766_0 Phage integrase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002149 467.0
BYDH3_k127_4739766_1 Domain of unknown function (DUF4143) - - - 0.00000001942 56.0
BYDH3_k127_4758013_0 Aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 3.749e-312 967.0
BYDH3_k127_4758013_1 PFAM TRAP C4-dicarboxylate transport system permease DctM subunit - - - 8.641e-209 656.0
BYDH3_k127_4758013_10 4Fe-4S dicluster domain - - - 0.0000000000000000000000000000000000000000000000000000000000000002947 223.0
BYDH3_k127_4758013_11 Cysteine-rich domain K00113 - 1.1.5.3 0.000000000000000000000000000000000000000000000000000000000000001603 226.0
BYDH3_k127_4758013_12 Cysteine-rich domain K00113 - 1.1.5.3 0.00000000000000000000000000000000000000000000000001351 196.0
BYDH3_k127_4758013_13 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.00000000000000000000000000000000000000000000000001768 183.0
BYDH3_k127_4758013_14 helix_turn_helix isocitrate lyase regulation - - - 0.000000000000000000000000000000000000000000000001415 184.0
BYDH3_k127_4758013_15 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000009775 186.0
BYDH3_k127_4758013_17 PFAM ThiS family K03636 - - 0.00003554 49.0
BYDH3_k127_4758013_2 AMP-binding enzyme C-terminal domain K02363 - 2.7.7.58,6.3.2.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002424 542.0
BYDH3_k127_4758013_3 Bacterial extracellular solute-binding protein, family 7 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007035 484.0
BYDH3_k127_4758013_4 AMP-binding enzyme C-terminal domain K01912 - 6.2.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001406 415.0
BYDH3_k127_4758013_5 PFAM 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K00074 - 1.1.1.157 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003065 406.0
BYDH3_k127_4758013_6 PFAM Major Facilitator Superfamily K02575 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002622 401.0
BYDH3_k127_4758013_7 helix_turn_helix isocitrate lyase regulation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012 391.0
BYDH3_k127_4758013_8 alpha/beta hydrolase fold K06889 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000586 357.0
BYDH3_k127_4758013_9 helix_turn_helix isocitrate lyase regulation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001766 310.0
BYDH3_k127_4885166_0 COGs COG0767 ABC-type transport system involved in resistance to organic solvents permease component K02066 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001228 482.0
BYDH3_k127_4885166_1 phosphoglycerate mutase activity K01834 GO:0003674,GO:0003824,GO:0004619,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006109,GO:0006139,GO:0006140,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009894,GO:0009987,GO:0010675,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016866,GO:0016868,GO:0017144,GO:0018130,GO:0019219,GO:0019220,GO:0019222,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0031323,GO:0031329,GO:0032787,GO:0034248,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0043455,GO:0043456,GO:0043470,GO:0043471,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046538,GO:0046700,GO:0046939,GO:0050789,GO:0050794,GO:0051171,GO:0051174,GO:0051186,GO:0051188,GO:0051193,GO:0051196,GO:0055086,GO:0060255,GO:0062012,GO:0065007,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0080090,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1902031 5.4.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001649 398.0
BYDH3_k127_4885166_2 23S rRNA-intervening sequence protein - - - 0.000000000000000000000000000000003239 131.0
BYDH3_k127_4887238_0 Glycosyltransferase like family 2 - - - 4.983e-200 634.0
BYDH3_k127_4887238_1 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002435 416.0
BYDH3_k127_4887238_2 Domain of unknown function (DUF4922) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000198 329.0
BYDH3_k127_4887238_3 PAS domain K07315 - 3.1.3.3 0.00000000000000000000000000000000000000000000000000000000000000004958 254.0
BYDH3_k127_4887238_4 Serine aminopeptidase, S33 K06889 - - 0.00000000000000000000000000000000000000000000000000000009453 203.0
BYDH3_k127_4887238_5 AraC-like ligand binding domain - - - 0.000000000000000000000000000000000000000000000000619 177.0
BYDH3_k127_4887238_6 Major facilitator superfamily MFS_1 K02445 - - 0.000000000000000000000000000000000000001081 152.0
BYDH3_k127_4964949_0 Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN NodQ subfamily K00955,K00956 - 2.7.1.25,2.7.7.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001449 406.0
BYDH3_k127_4964949_1 type I phosphodiesterase nucleotide pyrophosphatase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002609 391.0
BYDH3_k127_4964949_2 Glycosyltransferase like family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000009707 271.0
BYDH3_k127_4964949_3 Phosphoadenosine phosphosulfate reductase family K00390,K00957 - 1.8.4.10,1.8.4.8,2.7.7.4 0.0000000000000000000000000000000000000001539 151.0
BYDH3_k127_4964949_4 Bacterial transferase hexapeptide (six repeats) K00638 - 2.3.1.28 0.000000000000000000000000000000004021 134.0
BYDH3_k127_4964949_5 Uncharacterized conserved protein (DUF2304) K09153 - - 0.0000000000000000003696 91.0
BYDH3_k127_4964949_7 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.000001196 60.0
BYDH3_k127_4970044_0 Belongs to the peptidase S16 family K01338,K04076 - 3.4.21.53 0.0 1175.0
BYDH3_k127_4970044_1 NUDIX domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001215 258.0
BYDH3_k127_4970044_2 Major Facilitator Superfamily K08223 - - 0.00000000000000000000000000000016 123.0
BYDH3_k127_4971600_0 Domain of unknown function (DUF4070) - - - 4.614e-222 698.0
BYDH3_k127_4971600_1 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K01147,K12573 - 3.1.13.1 3.232e-199 631.0
BYDH3_k127_4971600_10 bacterial OsmY and nodulation domain - - - 0.00000000000000000000000000000000000000002843 156.0
BYDH3_k127_4971600_11 - - - - 0.00000000000000000000000000000001056 132.0
BYDH3_k127_4971600_12 - - - - 0.000000000000000000000000005588 113.0
BYDH3_k127_4971600_13 lipopolysaccharide transmembrane transporter activity K03303,K07058 - - 0.0000000000000000000000002274 116.0
BYDH3_k127_4971600_14 - - - - 0.000000000000000000000005707 102.0
BYDH3_k127_4971600_15 CsbD-like - - - 0.00000000000000002526 82.0
BYDH3_k127_4971600_16 - - - - 0.00000000000005925 72.0
BYDH3_k127_4971600_17 - - - - 0.00000000003669 65.0
BYDH3_k127_4971600_18 PFAM transport-associated K04065 - - 0.000000002566 59.0
BYDH3_k127_4971600_19 Glycine zipper - - - 0.00000002463 58.0
BYDH3_k127_4971600_2 PLD-like domain K06131 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005014 580.0
BYDH3_k127_4971600_20 YtxH-like protein - - - 0.000002617 53.0
BYDH3_k127_4971600_3 Membrane - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001037 554.0
BYDH3_k127_4971600_4 Pfam:UPF0118 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002781 349.0
BYDH3_k127_4971600_5 cell wall hydrolase K01449 - 3.5.1.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000172 303.0
BYDH3_k127_4971600_6 SOUL heme-binding protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001322 299.0
BYDH3_k127_4971600_7 Membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001113 252.0
BYDH3_k127_4971600_8 bacterial OsmY and nodulation domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000007751 241.0
BYDH3_k127_4971600_9 - - - - 0.0000000000000000000000000000000000000000006535 158.0
BYDH3_k127_5000238_0 ABC transporter K15738 - - 2.176e-306 951.0
BYDH3_k127_5000238_1 HD domain K07023 - - 1.459e-201 632.0
BYDH3_k127_5000238_2 PFAM glycyl-tRNA synthetase, alpha subunit K01878 - 6.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002161 584.0
BYDH3_k127_5000238_3 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001164 363.0
BYDH3_k127_5000238_4 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008385 357.0
BYDH3_k127_5000238_5 Belongs to the UPF0213 family K07461 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004527,GO:0004529,GO:0004536,GO:0006139,GO:0006259,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008296,GO:0008408,GO:0009987,GO:0016787,GO:0016788,GO:0016796,GO:0016895,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360 - 0.0000000000000001544 83.0
BYDH3_k127_5018538_0 Belongs to the thiolase family - - - 1.114e-206 644.0
BYDH3_k127_5018538_1 PFAM 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K00074 - 1.1.1.157 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001281 420.0
BYDH3_k127_5018538_2 helix_turn_helix isocitrate lyase regulation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001366 388.0
BYDH3_k127_5018538_3 Enoyl-CoA hydratase/isomerase K01692,K01715 - 4.2.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002684 387.0
BYDH3_k127_5018538_4 Cytochrome c bacterial - - - 0.0000000000000000000000000000000000000000000002737 182.0
BYDH3_k127_5018538_5 Fibronectin type 3 domain K12685,K16785,K16786,K16787 - - 0.000000000000000001284 98.0
BYDH3_k127_506382_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 3.897e-314 967.0
BYDH3_k127_506382_1 Proposed homoserine kinase K15635 - 5.4.2.12 1.132e-218 683.0
BYDH3_k127_506382_2 Belongs to the SIS family. GutQ KpsF subfamily K06041 - 5.3.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002873 527.0
BYDH3_k127_506382_3 PFAM Homoserine dehydrogenase K00003 - 1.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006407 430.0
BYDH3_k127_506382_5 3-deoxy-D-manno-octulosonic acid 8-phosphate synthase K01627 - 2.5.1.55 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008523 321.0
BYDH3_k127_5082281_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 GO:0003674,GO:0003824,GO:0004360,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006002,GO:0006040,GO:0006047,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0016740,GO:0016769,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.6.1.16 5.218e-294 912.0
BYDH3_k127_5082281_1 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042 - 2.3.1.157,2.7.7.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001992 314.0
BYDH3_k127_5082281_2 TM2 domain - - - 0.0000000000000000000000000000000000000000000000000405 180.0
BYDH3_k127_5082281_3 Bacterial capsule synthesis protein K07282 - - 0.000000007211 60.0
BYDH3_k127_5116261_0 Molybdate transporter of MFS superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003766 521.0
BYDH3_k127_5116261_1 4 iron, 4 sulfur cluster binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003294 279.0
BYDH3_k127_5116261_2 Lysine exporter protein (Lyse ygga) - - - 0.0000000000000000000000000001015 124.0
BYDH3_k127_5116261_3 Histidine kinase K17292 - - 0.000000000000000000002895 96.0
BYDH3_k127_5116261_4 PFAM Uncharacterised protein family UPF0066 - - - 0.0002031 44.0
BYDH3_k127_5293059_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002473 526.0
BYDH3_k127_5293059_1 CoA binding domain K01905,K22224 - 6.2.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001079 409.0
BYDH3_k127_5298699_0 Uncharacterised protein family (UPF0261) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003314 493.0
BYDH3_k127_5298699_1 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001189 411.0
BYDH3_k127_5298699_2 Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates K00179 - 1.2.7.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005569 386.0
BYDH3_k127_5298699_3 LysR substrate binding domain - - - 0.000000000000000000000000000000000000000000000000009174 192.0
BYDH3_k127_5302786_0 PEP-utilising enzyme, mobile domain K01007 - 2.7.9.2 3.662e-316 976.0
BYDH3_k127_5302786_1 Pyruvate phosphate dikinase, PEP/pyruvate binding domain K01007 - 2.7.9.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001811 570.0
BYDH3_k127_5302786_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000009219 236.0
BYDH3_k127_5342596_0 Histidine kinase A domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000003611 233.0
BYDH3_k127_5342596_1 Histidine kinase - - - 0.00000000000000000000000000000000002784 146.0
BYDH3_k127_5342596_2 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000002801 121.0
BYDH3_k127_5342596_3 PFAM glycoside hydrolase, family 13 domain protein - - - 0.00000000000000000000000005507 109.0
BYDH3_k127_5380926_0 FAD dependent oxidoreductase K00244 - 1.3.5.4 2.658e-224 707.0
BYDH3_k127_5380926_1 Bacterial regulatory protein, Fis family - - - 2.428e-215 679.0
BYDH3_k127_5380926_2 Telomere recombination K07566 - 2.7.7.87 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000251 466.0
BYDH3_k127_5380926_3 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03110 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009886 352.0
BYDH3_k127_5380926_5 denitrification pathway - - - 0.000000000000000000000000000000000001213 147.0
BYDH3_k127_5380926_7 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.00000000000000000000000006383 107.0
BYDH3_k127_5380926_8 - - - - 0.0000008539 55.0
BYDH3_k127_5390496_0 VWA containing CoxE family protein K09989 - - 5.154e-239 741.0
BYDH3_k127_5390496_1 Amino-transferase class IV K00826 - 2.6.1.42 3.01e-198 621.0
BYDH3_k127_5390496_2 AAA domain (Cdc48 subfamily) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002037 493.0
BYDH3_k127_5390496_3 PFAM CobQ CobB MinD ParA nucleotide binding domain K03496 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001942 320.0
BYDH3_k127_5390496_4 sodium-dependent phosphate transmembrane transporter activity - - - 0.000000000000000000000001389 106.0
BYDH3_k127_5456108_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.0 1233.0
BYDH3_k127_5456108_1 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000003171 242.0
BYDH3_k127_5456108_2 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 - - 0.00000000000241 66.0
BYDH3_k127_5458107_0 radical SAM domain protein K03716 - 4.1.99.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005586 542.0
BYDH3_k127_5458107_1 Protein of unknown function (DUF763) K09003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005454 531.0
BYDH3_k127_5458107_10 - - - - 0.0000000000000000000000000000005989 126.0
BYDH3_k127_5458107_11 aminopeptidase N - - - 0.0000000000000002271 83.0
BYDH3_k127_5458107_13 B12 binding domain - - - 0.0000000000002258 71.0
BYDH3_k127_5458107_15 - - - - 0.0000000001344 63.0
BYDH3_k127_5458107_16 Belongs to the ParB family K03497 - - 0.000001043 60.0
BYDH3_k127_5458107_2 Enoyl-(Acyl carrier protein) reductase K00065 - 1.1.1.127 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002891 454.0
BYDH3_k127_5458107_3 Aminotransferase, class I K10907 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009222 449.0
BYDH3_k127_5458107_4 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004479 420.0
BYDH3_k127_5458107_5 Flavin reductase like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002225 291.0
BYDH3_k127_5458107_7 Redoxin K11065 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000000000000001063 234.0
BYDH3_k127_5458107_8 - - - - 0.0000000000000000000000000000000000000000000000000000008119 201.0
BYDH3_k127_5458107_9 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000001188 154.0
BYDH3_k127_5464636_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 1.911e-243 754.0
BYDH3_k127_5464636_1 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001064 387.0
BYDH3_k127_5464636_2 sugar-phosphate isomerases, RpiB LacA LacB family K01808 - 5.3.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000001374 251.0
BYDH3_k127_5464636_3 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 GO:0000035,GO:0000036,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016053,GO:0019637,GO:0019752,GO:0019842,GO:0031177,GO:0032787,GO:0033218,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044620,GO:0046394,GO:0046467,GO:0046493,GO:0048037,GO:0051192,GO:0071704,GO:0072330,GO:0072341,GO:0090407,GO:0140104,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 - 0.00000000000000000000000000000000000004559 143.0
BYDH3_k127_5464636_4 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.0000000000000000000000003163 105.0
BYDH3_k127_5470892_0 acetyltransferase K19113 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007157 391.0
BYDH3_k127_5470892_1 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000457 343.0
BYDH3_k127_5470892_2 PFAM Major Facilitator Superfamily K02575 - - 0.00000001381 57.0
BYDH3_k127_5496590_0 Elongation factor Tu domain 2 K06207 - - 0.0 1084.0
BYDH3_k127_5496590_1 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 GO:0003674,GO:0003824,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016879,GO:0016884,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0050567,GO:0070681,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.3.5.6,6.3.5.7 1.454e-274 848.0
BYDH3_k127_5496590_11 Dodecin K09165 - - 0.00000000000000000000000001443 112.0
BYDH3_k127_5496590_13 Endonuclease V K05982 - 3.1.21.7 0.0009645 43.0
BYDH3_k127_5496590_2 PFAM Aminotransferase class I and II K00814 - 2.6.1.2 1.678e-221 692.0
BYDH3_k127_5496590_3 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0019509,GO:0019752,GO:0043094,GO:0043102,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046523,GO:0071265,GO:0071267,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001453 526.0
BYDH3_k127_5496590_4 OST-HTH/LOTUS domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001113 442.0
BYDH3_k127_5496590_5 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007868 419.0
BYDH3_k127_5496590_6 Iron only hydrogenase large subunit, C-terminal domain K00336,K18332 - 1.12.1.3,1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000062 405.0
BYDH3_k127_5496590_7 S-adenosyl-l-methionine hydroxide adenosyltransferase K22205 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001776 372.0
BYDH3_k127_5496590_8 HD domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007193 326.0
BYDH3_k127_5496590_9 Single-strand binding protein family K03111 - - 0.0000000000000000000000000000000000000000000000000000000000000002007 222.0
BYDH3_k127_5498113_0 PFAM Peptidase M16 - - - 3.72e-220 687.0
BYDH3_k127_5498113_1 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004654,GO:0005488,GO:0006139,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009892,GO:0009987,GO:0010468,GO:0010605,GO:0010629,GO:0016070,GO:0016071,GO:0016740,GO:0016772,GO:0016779,GO:0019222,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0060255,GO:0065007,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901575 2.7.7.8 1.475e-205 642.0
BYDH3_k127_5498113_2 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA K01520 GO:0000287,GO:0003674,GO:0003824,GO:0004170,GO:0005488,GO:0006139,GO:0006220,GO:0006221,GO:0006226,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009141,GO:0009143,GO:0009147,GO:0009149,GO:0009157,GO:0009162,GO:0009165,GO:0009166,GO:0009176,GO:0009177,GO:0009200,GO:0009204,GO:0009211,GO:0009213,GO:0009219,GO:0009221,GO:0009223,GO:0009262,GO:0009263,GO:0009264,GO:0009265,GO:0009394,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046078,GO:0046080,GO:0046081,GO:0046385,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0046872,GO:0047429,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0072529,GO:0090407,GO:1901135,GO:1901136,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 3.6.1.23 0.0000000000000000000000000000000000000000000000007842 178.0
BYDH3_k127_5498113_3 Tyrosine recombinase XerD K03733,K04763 - - 0.000000000002866 66.0
BYDH3_k127_5555875_0 PFAM Citrate transporter - - - 1.38e-200 629.0
BYDH3_k127_5555875_1 Na transporting methylmalonyl-CoA oxaloacetate decarboxylase beta subunit K01572 - 4.1.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000001216 244.0
BYDH3_k127_5578852_0 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002969 584.0
BYDH3_k127_5578852_1 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003138 344.0
BYDH3_k127_5578852_2 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001292 343.0
BYDH3_k127_5578852_3 NUBPL iron-transfer P-loop NTPase K04562 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001269 308.0
BYDH3_k127_5640408_0 Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates K00179 - 1.2.7.8 7.535e-286 887.0
BYDH3_k127_5640408_1 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K06001 - 4.2.1.20 9.082e-267 826.0
BYDH3_k127_5640408_2 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K13015 - 1.1.1.136 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002174 558.0
BYDH3_k127_5640408_3 Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates K00179 - 1.2.7.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008953 503.0
BYDH3_k127_5640408_4 Glycosyltransferase like family 2 K07011 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005929 383.0
BYDH3_k127_5640408_5 PFAM pyruvate ferredoxin flavodoxin oxidoreductase K00180 - 1.2.7.8 0.000000000000000000000000000000000000000000000000000000000000000000000001302 249.0
BYDH3_k127_5642369_0 CoA binding domain K01905,K22224 - 6.2.1.13 1.134e-277 869.0
BYDH3_k127_5642369_1 Flavodoxin-like fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005172 369.0
BYDH3_k127_5642369_2 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.000000000000000000000000000000000000000000000000000000000000004767 221.0
BYDH3_k127_5642369_3 PFAM Amino acid permease K03294 - - 0.00000000000000001478 83.0
BYDH3_k127_5642369_4 - - - - 0.00001303 55.0
BYDH3_k127_5822665_0 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 1.785e-261 811.0
BYDH3_k127_5822665_1 Beta-Casp domain K07576 - - 1.881e-238 743.0
BYDH3_k127_5822665_10 Protein of unknown function (DUF2400) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001835 308.0
BYDH3_k127_5822665_11 Protein of unknown function DUF45 K07043 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004091 270.0
BYDH3_k127_5822665_12 NUDIX domain K01823 - 5.3.3.2 0.00000000000000000000000000000000000000000000000000000000000000000001532 236.0
BYDH3_k127_5822665_13 Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner K09810 - - 0.00000000000000000000000000000000000000000000000000000000000000002698 231.0
BYDH3_k127_5822665_14 dTDP-4-dehydrorhamnose 3,5-epimerase activity - - - 0.0000000000000000000000000000000000000000000000000000000004376 203.0
BYDH3_k127_5822665_15 - - - - 0.0000000000000000000000000000000000000000001755 164.0
BYDH3_k127_5822665_18 PFAM TPR repeat-containing protein - - - 0.00000000000000000000000000001714 126.0
BYDH3_k127_5822665_19 HD domain - - - 0.0000000000000000000000000002248 115.0
BYDH3_k127_5822665_2 Ribosomal protein S1-like RNA-binding domain K02945 - - 2.325e-233 730.0
BYDH3_k127_5822665_3 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 6.796e-208 654.0
BYDH3_k127_5822665_4 TIGRFAM Lipoprotein releasing system, transmembrane protein, LolC E family K09808 - - 3.219e-199 627.0
BYDH3_k127_5822665_5 MotA/TolQ/ExbB proton channel family K02556 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000026 445.0
BYDH3_k127_5822665_6 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003124 421.0
BYDH3_k127_5822665_7 Membrane MotB of proton-channel complex MotA/MotB K02557 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005132 400.0
BYDH3_k127_5822665_8 HD domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004089 389.0
BYDH3_k127_5822665_9 Tim44 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003568 336.0
BYDH3_k127_5858572_0 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead K20447 - 1.17.1.5 1.09e-210 676.0
BYDH3_k127_5858572_1 Amidohydrolase family K15358 - 3.5.2.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001357 465.0
BYDH3_k127_5858572_2 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM K03519,K18021 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0008152,GO:0016491,GO:0016903,GO:0036094,GO:0043167,GO:0043168,GO:0044424,GO:0044464,GO:0048037,GO:0050660,GO:0050662,GO:0055114,GO:0097159,GO:1901265,GO:1901363 1.2.5.3,1.2.99.8 0.0000000000000000000000000000000000000000002522 169.0
BYDH3_k127_5931496_0 FHIPEP family K02400 - - 0.0 1156.0
BYDH3_k127_5931496_1 HEAT repeats - - - 1.883e-207 662.0
BYDH3_k127_5931496_10 Flagellar basal body protein FlaE K02390 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008085 395.0
BYDH3_k127_5931496_11 Bacterial export proteins, family 1 K02421 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002444 335.0
BYDH3_k127_5931496_12 Flagellar basal body protein FlaE K02390 - - 0.000000000000000000000000000000000000000000000000000000000000000000004302 237.0
BYDH3_k127_5931496_13 Response regulator receiver K03413 - - 0.00000000000000000000000000000000000000000000000000000000261 201.0
BYDH3_k127_5931496_14 Flagellar basal body-associated protein FliL K02415 - - 0.00000000000000000000000000000000000000000000000000000008148 200.0
BYDH3_k127_5931496_15 Bacterial export proteins, family 3 K02420 - - 0.0000000000000000000000000000000000001872 143.0
BYDH3_k127_5931496_17 Type III flagellar switch regulator (C-ring) FliN C-term K02417 - - 0.00000000000000000000133 96.0
BYDH3_k127_5931496_18 Type III flagellar switch regulator (C-ring) FliN C-term K02417 - - 0.00000000000002172 72.0
BYDH3_k127_5931496_19 Flagellar hook capping protein - N-terminal region K02389 - - 0.00001206 47.0
BYDH3_k127_5931496_2 FlhB HrpN YscU SpaS Family K02401 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002559 520.0
BYDH3_k127_5931496_20 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03106 - 3.6.5.4 0.000941 51.0
BYDH3_k127_5931496_3 CheB methylesterase K03412 - 3.1.1.61,3.5.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005493 519.0
BYDH3_k127_5931496_4 Flagellar motor switch protein FliM K02416 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000169 516.0
BYDH3_k127_5931496_5 Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP K00575 - 2.1.1.80 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002169 464.0
BYDH3_k127_5931496_6 Signal transducing histidine kinase homodimeric K03407 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007255 466.0
BYDH3_k127_5931496_7 NUBPL iron-transfer P-loop NTPase K04562 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003047 442.0
BYDH3_k127_5931496_8 RNA polymerase sigma factor K02405 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001388 419.0
BYDH3_k127_5931496_9 FliP family K02419 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006427 394.0
BYDH3_k127_5969313_0 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 3.949e-229 719.0
BYDH3_k127_5969313_1 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 4.682e-206 665.0
BYDH3_k127_5969313_2 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 - 2.2.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002043 379.0
BYDH3_k127_5969313_3 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007634 351.0
BYDH3_k127_5969313_4 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.000000000000000000000000000000000000000000000000664 176.0
BYDH3_k127_5969313_5 Elongator protein 3, MiaB family, Radical SAM K04069 - 1.97.1.4 0.000000000000000000000000000000001635 133.0
BYDH3_k127_5983613_0 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 GO:0000270,GO:0003674,GO:0003824,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008765,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0030203,GO:0034645,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 6.3.2.13 5.263e-233 728.0
BYDH3_k127_5983613_1 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 1.473e-208 656.0
BYDH3_k127_5983613_2 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002975 510.0
BYDH3_k127_5983613_3 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001398 417.0
BYDH3_k127_5983613_6 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002989 281.0
BYDH3_k127_6139153_0 PFAM NADH-ubiquinone oxidoreductase, chain 49kDa K00333,K14090 - 1.6.5.3 8.509e-204 637.0
BYDH3_k127_6139153_1 PFAM NADH ubiquinone oxidoreductase 20 kDa subunit K14088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006536 267.0
BYDH3_k127_6139153_2 Respiratory-chain NADH dehydrogenase, 30 Kd subunit K14089 - - 0.00000000000000000000000000000000000000000000000000002573 191.0
BYDH3_k127_6139153_3 4Fe-4S dicluster domain K14091 - - 0.0000000000000000000000000000000000000000003556 160.0
BYDH3_k127_6139153_4 PFAM Aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 0.00000000000000000000000000000000000004127 144.0
BYDH3_k127_6139153_5 NADH dehydrogenase K14087 - - 0.000000000000000000006551 93.0
BYDH3_k127_6300323_0 NADH flavin oxidoreductase NADH oxidase - - - 2.111e-298 927.0
BYDH3_k127_6300323_1 Iron-sulfur cluster-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007431 439.0
BYDH3_k127_6300323_2 Electron transfer flavoprotein domain K03522 - - 0.00000000000000000000000000000000000000000000000001804 192.0
BYDH3_k127_6300323_3 Zinc-binding dehydrogenase - - - 0.000000000000000000000000000002733 126.0
BYDH3_k127_6300323_4 Lycopene cyclase protein K00313 - - 0.000000000000000000000000005278 112.0
BYDH3_k127_637641_0 TIGRFAM formate dehydrogenase, alpha subunit K00123 - 1.17.1.9 0.0 1437.0
BYDH3_k127_637641_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 5.812e-250 787.0
BYDH3_k127_637641_2 Domain of unknown function (DUF362) - - - 5.321e-236 743.0
BYDH3_k127_637641_3 two component, sigma54 specific, transcriptional regulator, Fis family K02481,K07713 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002653 587.0
BYDH3_k127_637641_4 Sir2 family K12410 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001518 359.0
BYDH3_k127_637641_5 Molybdopterin oxidoreductase Fe4S4 domain K00123 - 1.17.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000039 323.0
BYDH3_k127_637641_6 ABC-type branched-chain amino acid transport systems, periplasmic component K01999 - - 0.0000000000000000000000000000001343 134.0
BYDH3_k127_637641_7 Thioesterase superfamily - - - 0.0000000000000000000007841 101.0
BYDH3_k127_637641_8 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein K00124 - - 0.0000000000000006577 77.0
BYDH3_k127_6385108_0 Elongation factor Tu domain 2 K02355 - - 0.0 1255.0
BYDH3_k127_6385108_1 Domain of unknown function (DUF362) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007124 316.0
BYDH3_k127_6385108_2 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 GO:0002161,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006399,GO:0006450,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0034641,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0051499,GO:0051500,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:1901360 - 0.0000000000000000000000000000000000000000000000000000000000000001607 223.0
BYDH3_k127_6385108_3 ribonuclease P activity K03536,K08998 GO:0000966,GO:0001682,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004526,GO:0004540,GO:0004549,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005655,GO:0005730,GO:0006139,GO:0006396,GO:0006399,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0030677,GO:0030681,GO:0031123,GO:0031404,GO:0031974,GO:0031981,GO:0032991,GO:0033204,GO:0034414,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0040007,GO:0042301,GO:0042779,GO:0042780,GO:0042781,GO:0043167,GO:0043168,GO:0043170,GO:0043199,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043628,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044452,GO:0044464,GO:0046483,GO:0070013,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0099116,GO:0140098,GO:0140101,GO:1901360,GO:1901363,GO:1901681,GO:1902494,GO:1902555,GO:1905267,GO:1905348,GO:1990904 3.1.26.5 0.00000000000000000000000000000000000000000000001272 175.0
BYDH3_k127_6385108_4 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.0000000000000000000005141 97.0
BYDH3_k127_6385108_5 Ribosomal protein L34 K02914 - - 0.0000000000004978 69.0
BYDH3_k127_6446244_0 Glutamine synthetase type III N terminal K01915 - 6.3.1.2 0.0 1236.0
BYDH3_k127_6446244_1 3'(2'),5'-bisphosphate nucleotidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002159 491.0
BYDH3_k127_6446244_2 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K01905,K11175,K22224 - 2.1.2.2,6.2.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002931 438.0
BYDH3_k127_6446244_3 Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway K00852,K00856,K10710,K22026 - 2.7.1.15,2.7.1.20,2.7.1.213,2.7.1.218,2.7.1.73 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001854 385.0
BYDH3_k127_6446244_4 chlorophyll binding - - - 0.00000000000000000000000000000000000000000000000000000000000000005612 232.0
BYDH3_k127_6446244_5 Histidine kinase - - - 0.0000000000000000000000000000000000000003301 159.0
BYDH3_k127_6446244_6 Belongs to the P(II) protein family K04752 - - 0.0000000000000000000000006057 105.0
BYDH3_k127_6446244_7 - - - - 0.00000000000000000008307 89.0
BYDH3_k127_6468644_0 Predicted permease YjgP/YjgQ family K07091 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003355 530.0
BYDH3_k127_6468644_1 Permease YjgP YjgQ family K11720 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004509 502.0
BYDH3_k127_6468644_2 Serine aminopeptidase, S33 K06889,K07397 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005145 359.0
BYDH3_k127_6468644_3 Bacterial transferase hexapeptide (six repeats) K02617,K08279 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002682 273.0
BYDH3_k127_6468644_4 transmembrane transport K16053 - - 0.000000000000000000000000000000000000000000004851 165.0
BYDH3_k127_6468644_5 RNase_H superfamily K07502 - - 0.0000000000000000000000000001141 121.0
BYDH3_k127_6468644_6 peptidyl-tyrosine sulfation - - - 0.00000000000000000000006114 102.0
BYDH3_k127_6468644_7 transmembrane transport K16053 - - 0.00000000000000000002038 90.0
BYDH3_k127_648_0 Thiolase, C-terminal domain K00626 - 2.3.1.9 4.008e-231 718.0
BYDH3_k127_648_1 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002546 501.0
BYDH3_k127_648_2 TPM domain K06872 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001165 373.0
BYDH3_k127_648_3 Pfam:TPM K08988 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005897 290.0
BYDH3_k127_648_4 Rubredoxin-like zinc ribbon domain (DUF35_N) K07068 - - 0.000000000000000000000000000000000000000000000000000000000000000000005715 235.0
BYDH3_k127_648_5 LemA family K03744 - - 0.00000000000000000000000000000000000000000000000000000000007551 205.0
BYDH3_k127_648_6 NifU-like domain - - - 0.0000000000000000000000000000000004134 132.0
BYDH3_k127_648_7 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 GO:0000966,GO:0000967,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 - 0.000000000000000000000000003443 115.0
BYDH3_k127_648_8 - - - - 0.00000000000005711 74.0
BYDH3_k127_6481991_0 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 0.0 1277.0
BYDH3_k127_6481991_1 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 2.748e-246 764.0
BYDH3_k127_6481991_10 - - - - 0.000000000000000000000000000000001237 130.0
BYDH3_k127_6481991_11 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.000000000000000000000001316 106.0
BYDH3_k127_6481991_2 Participates in both transcription termination and antitermination K02600 - - 1.939e-242 753.0
BYDH3_k127_6481991_3 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004654,GO:0005488,GO:0006139,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009892,GO:0009987,GO:0010468,GO:0010605,GO:0010629,GO:0016070,GO:0016071,GO:0016740,GO:0016772,GO:0016779,GO:0019222,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0060255,GO:0065007,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901575 2.7.7.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007041 586.0
BYDH3_k127_6481991_4 DHH family K06881 - 3.1.13.3,3.1.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003514 503.0
BYDH3_k127_6481991_5 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016556,GO:0016853,GO:0016866,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1990481 5.4.99.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001375 494.0
BYDH3_k127_6481991_6 Male sterility protein K01710,K01784 - 4.2.1.46,5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006792 468.0
BYDH3_k127_6481991_7 RimP C-terminal SH3 domain K09748 GO:0000028,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000000000000000000000001731 255.0
BYDH3_k127_6481991_8 Protein of unknown function (DUF503) K09764 - - 0.00000000000000000000000000000000000000000000001359 172.0
BYDH3_k127_6481991_9 Ribosomal_S15 K02956 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000000000000002338 156.0
BYDH3_k127_6584289_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 9.208e-283 873.0
BYDH3_k127_6584289_1 Phosphoglucose isomerase K01810 - 5.3.1.9 5.867e-282 874.0
BYDH3_k127_6584289_2 phosphoglucomutase phosphomannomutase alpha beta alpha domain I K01835 - 5.4.2.2 1.238e-227 717.0
BYDH3_k127_6584289_3 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 GO:0003674,GO:0003824,GO:0004042,GO:0004358,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006592,GO:0006807,GO:0008080,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.3.1.1,2.3.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001445 586.0
BYDH3_k127_6584289_4 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002472 355.0
BYDH3_k127_6584289_5 - - - - 0.0000000000000000000000001106 112.0
BYDH3_k127_6593654_0 Nitrite and sulphite reductase 4Fe-4S domain K11180 - 1.8.99.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006121 573.0
BYDH3_k127_6593654_1 Nitrite and sulphite reductase 4Fe-4S domain K11181 - 1.8.99.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007656 524.0
BYDH3_k127_6593654_2 Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source K02224 - 6.3.5.11,6.3.5.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006481 476.0
BYDH3_k127_6593654_3 DsrC like protein K11179 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.000000000000000000000000000000000000000000000000008542 183.0
BYDH3_k127_6593654_4 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.00000000000000000000002028 101.0
BYDH3_k127_6593654_5 - - - - 0.0000000002944 65.0
BYDH3_k127_6593654_6 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 0.0000000557 56.0
BYDH3_k127_6593654_7 transferase activity, transferring glycosyl groups - - - 0.0000008879 56.0
BYDH3_k127_6593654_8 - - - - 0.0007619 44.0
BYDH3_k127_6781677_0 NAD(P)-binding Rossmann-like domain K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 2.827e-285 883.0
BYDH3_k127_6781677_1 4Fe-4S dicluster domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007065 403.0
BYDH3_k127_6781677_2 PFAM methyl-viologen-reducing hydrogenase delta subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000002997 237.0
BYDH3_k127_6805266_0 PFAM Pyruvate carboxyltransferase - - - 0.0 1135.0
BYDH3_k127_6805266_1 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 2.929e-316 975.0
BYDH3_k127_6805266_2 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 5.491e-220 685.0
BYDH3_k127_6805266_3 RadC-like JAB domain K03630 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001235 289.0
BYDH3_k127_684932_0 Domain of Unknown Function (DUF748) - - - 1.135e-294 927.0
BYDH3_k127_6878319_0 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001172 610.0
BYDH3_k127_6878319_1 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.00000000000000000000000000106 117.0
BYDH3_k127_6878319_2 membrane - - - 0.00000000000006467 72.0
BYDH3_k127_68838_0 Parallel beta-helix repeats - - - 0.0 1118.0
BYDH3_k127_68838_1 TIGRFAM phenylalanyl-tRNA synthetase, beta subunit K01890 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 9.494e-281 871.0
BYDH3_k127_68838_10 Multicopper oxidase - - - 0.00000000000000000000000000000000000000000000001847 179.0
BYDH3_k127_68838_11 Two component transcriptional regulator, LuxR family K07689 - - 0.000000000000000001608 91.0
BYDH3_k127_68838_2 Peptidase family M50 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002144 388.0
BYDH3_k127_68838_3 dna polymerase III delta subunit K02340 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001365 370.0
BYDH3_k127_68838_4 helix_turn_helix, Lux Regulon K14979 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001345 256.0
BYDH3_k127_68838_6 membrane K08978 - - 0.0000000000000000000000000000000000000000000000000000000000001534 214.0
BYDH3_k127_68838_7 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000324 214.0
BYDH3_k127_68838_8 helix_turn_helix, mercury resistance - - - 0.00000000000000000000000000000000000000000000000000001795 188.0
BYDH3_k127_68838_9 bacterial (prokaryotic) histone like domain K04764 - - 0.000000000000000000000000000000000000000000000001236 174.0
BYDH3_k127_689530_0 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 GO:0000166,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005524,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0030163,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0044238,GO:0051301,GO:0070011,GO:0071704,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575 - 8.183e-267 822.0
BYDH3_k127_689530_1 Saccharopine dehydrogenase C-terminal domain K00290 - 1.5.1.7 1.075e-238 741.0
BYDH3_k127_689530_2 Pyridoxal-dependent decarboxylase, C-terminal sheet domain K13747 - 4.1.1.96 2.086e-209 660.0
BYDH3_k127_689530_3 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009716 571.0
BYDH3_k127_689530_4 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005589 364.0
BYDH3_k127_689530_5 PFAM Methyladenine glycosylase K01246 - 3.2.2.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001672 283.0
BYDH3_k127_689530_6 Belongs to the arginase family K01480 - 3.5.3.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001383 284.0
BYDH3_k127_689530_7 Ferritin-like domain - GO:0003674,GO:0003824,GO:0004601,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009636,GO:0009987,GO:0016209,GO:0016491,GO:0016684,GO:0016692,GO:0022900,GO:0042221,GO:0044237,GO:0050896,GO:0051716,GO:0055114,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1990748 - 0.00000000000000000000000000000000000000000000000000000000001189 212.0
BYDH3_k127_6943273_0 HD domain - - - 6.188e-258 807.0
BYDH3_k127_6943273_1 Bacterial regulatory protein, Fis family - - - 4.365e-256 797.0
BYDH3_k127_6943273_10 Domain of unknown function (DUF4404) - - - 0.00000000000000000000000000000000000006923 144.0
BYDH3_k127_6943273_11 PFAM PQQ enzyme repeat - - - 0.0000000000000000000000000002032 135.0
BYDH3_k127_6943273_12 SpoVT / AbrB like domain - - - 0.000000000000000000000001248 105.0
BYDH3_k127_6943273_13 cellulose binding - - - 0.00000000000000001551 99.0
BYDH3_k127_6943273_14 Domain of unknown function (DUF5122) beta-propeller - - - 0.000002005 62.0
BYDH3_k127_6943273_16 Large extracellular alpha-helical protein K09607 - - 0.000215 55.0
BYDH3_k127_6943273_2 PFAM 2-hydroxyglutaryl-CoA dehydratase, D-component - - - 4.045e-249 773.0
BYDH3_k127_6943273_3 PFAM 2-hydroxyglutaryl-CoA dehydratase, D-component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002814 597.0
BYDH3_k127_6943273_4 BadF/BadG/BcrA/BcrD ATPase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000588 433.0
BYDH3_k127_6943273_5 BadF/BadG/BcrA/BcrD ATPase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001013 363.0
BYDH3_k127_6943273_6 PIN domain - - - 0.00000000000000000000000000000000000000000000000000000004432 198.0
BYDH3_k127_6943273_7 Fibronectin type 3 domain K12685,K16785,K16786,K16787 - - 0.0000000000000000000000000000000000000000000000000000001616 224.0
BYDH3_k127_6943273_9 COGs COG1639 signal transduction protein - - - 0.0000000000000000000000000000000000000002408 160.0
BYDH3_k127_697728_0 Histidine kinase K07675,K09684 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005628 580.0
BYDH3_k127_697728_1 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000212 348.0
BYDH3_k127_697728_2 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase K00261,K00262 - 1.4.1.3,1.4.1.4 0.0000000000000000004273 87.0
BYDH3_k127_697728_3 Methylene-tetrahydrofolate reductase C terminal - - - 0.0000000000008017 68.0
BYDH3_k127_697728_5 Histidine kinase K07675,K09684 - 2.7.13.3 0.000000003487 59.0
BYDH3_k127_7010310_0 Elongator protein 3, MiaB family, Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004344 591.0
BYDH3_k127_7010310_1 PFAM Thiamine pyrophosphate K01652 - 2.2.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001015 545.0
BYDH3_k127_7010310_2 Permease family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006814 491.0
BYDH3_k127_7010310_3 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006471 473.0
BYDH3_k127_7010310_4 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001035 447.0
BYDH3_k127_7010310_5 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 GO:0003674,GO:0003824,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006573,GO:0006575,GO:0006732,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016874,GO:0016879,GO:0016881,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901564,GO:1901566,GO:1901576,GO:1901605 6.3.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001173 402.0
BYDH3_k127_7010310_6 Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine K01579 - 4.1.1.11 0.00000000000000000000000000000000000000000000000000000000000004603 215.0
BYDH3_k127_7010310_7 Staphylococcal nuclease homologues K01174 - 3.1.31.1 0.00000000000000000000000000000000000000000000001361 177.0
BYDH3_k127_7010310_9 Integral membrane protein TerC family - - - 0.00000000000004976 74.0
BYDH3_k127_7069094_0 PFAM Patatin K07001 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000957 391.0
BYDH3_k127_7069094_1 Protein of unknown function (DUF2950) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001038 349.0
BYDH3_k127_7069094_2 Protein of unknown function (DUF3300) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009494 335.0
BYDH3_k127_7069094_3 COGs COG4689 Acetoacetate decarboxylase - - - 0.000000000000000000000000000000000000000000000001708 181.0
BYDH3_k127_7110653_0 COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001009 362.0
BYDH3_k127_7110653_1 AAA domain K02450,K12283 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001051 354.0
BYDH3_k127_7110653_2 glycosyl transferase group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001554 327.0
BYDH3_k127_7110653_3 COG1985 Pyrimidine reductase, riboflavin biosynthesis K00082,K11752 - 1.1.1.193,3.5.4.26 0.000000000000000000000000000000000000000000000000000000000001673 217.0
BYDH3_k127_7110653_4 HNH nucleases - - - 0.000000000000000000000000000000000000000000000004353 173.0
BYDH3_k127_7110653_5 PFAM 6-pyruvoyl tetrahydropterin synthase and K01737 - 4.1.2.50,4.2.3.12 0.000000000000000000000000000000000000000003729 157.0
BYDH3_k127_7110653_6 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 0.00000000000000000000000006154 107.0
BYDH3_k127_7110653_7 rRNA (adenine-N6,N6-)-dimethyltransferase activity K00561,K02528 GO:0000154,GO:0000179,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.182,2.1.1.184 0.000000000000000000000008698 107.0
BYDH3_k127_7110653_8 PFAM Pentapeptide repeats (8 copies) - - - 0.0000000000000009598 84.0
BYDH3_k127_7110653_9 Type II secretion system protein B K02451 - - 0.0000006333 59.0
BYDH3_k127_7193029_0 TIGRFAM TRAP transporter, 4TM 12TM fusion protein - - - 2.608e-239 756.0
BYDH3_k127_7193029_1 D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1 K03841 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005984,GO:0005985,GO:0005986,GO:0005996,GO:0006000,GO:0006002,GO:0006006,GO:0006094,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009058,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019203,GO:0019318,GO:0019319,GO:0019637,GO:0030388,GO:0034637,GO:0042132,GO:0042578,GO:0044237,GO:0044238,GO:0044249,GO:0044262,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046351,GO:0046364,GO:0050308,GO:0071704,GO:1901135,GO:1901576 3.1.3.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001208 494.0
BYDH3_k127_7193029_2 TIGRFAM TRAP transporter solute receptor, TAXI family K07080 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001391 317.0
BYDH3_k127_7193029_3 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.0000000000000000001745 91.0
BYDH3_k127_7199004_0 Predicted permease K07089 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003874 474.0
BYDH3_k127_7199004_1 Cation efflux family K16264 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001733 258.0
BYDH3_k127_7199004_2 helix_turn_helix, Arsenical Resistance Operon Repressor K03892 - - 0.00000000000000000000000000000000002195 139.0
BYDH3_k127_7199004_3 Cation efflux family K16264 - - 0.00000000000000001879 85.0
BYDH3_k127_7199004_4 Domain of unknown function (DUF2703) - - - 0.00000000000001022 80.0
BYDH3_k127_7228998_0 Flagellar P-ring protein K02394 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005642 550.0
BYDH3_k127_7228998_1 Polysaccharide biosynthesis protein K13006,K15673,K15894 - 4.2.1.115 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001175 400.0
BYDH3_k127_7228998_2 Flagella basal body rod protein K02396 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005906 391.0
BYDH3_k127_7228998_3 Flagellar L-ring protein K02393 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001738 358.0
BYDH3_k127_7228998_4 Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella K02397 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001075 299.0
BYDH3_k127_7228998_5 Chaperone for flagella basal body P-ring formation K02386 - - 0.00000000000000000000000000000000000000000000000000000000003612 208.0
BYDH3_k127_7263518_0 CoA-binding domain protein K01905,K09181,K22224 - 6.2.1.13 4.277e-213 670.0
BYDH3_k127_7263518_1 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006033 404.0
BYDH3_k127_7263518_10 - - - - 0.00000000000008568 79.0
BYDH3_k127_7263518_2 PFAM Peptidoglycan-binding domain 1 protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005863 320.0
BYDH3_k127_7263518_3 Haloacid dehalogenase-like hydrolase K20866 - 3.1.3.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001161 302.0
BYDH3_k127_7263518_4 ATP-grasp domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003189 276.0
BYDH3_k127_7263518_5 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003962 262.0
BYDH3_k127_7263518_6 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000007288 259.0
BYDH3_k127_7263518_7 Carbonic anhydrase K01673 - 4.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000007304 253.0
BYDH3_k127_7263518_8 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.0000000000000000000000000000000000000000007825 157.0
BYDH3_k127_7263518_9 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.000000000000000000000000006366 123.0
BYDH3_k127_7308170_0 Thiamine pyrophosphate enzyme, central K01652 - 2.2.1.6 0.0 1005.0
BYDH3_k127_7308170_1 PFAM Glycosyl transferase family 2 K10012,K20534 - 2.4.2.53 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002825 526.0
BYDH3_k127_7308170_2 Formyl transferase, C-terminal domain K00604 - 2.1.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001809 357.0
BYDH3_k127_7308170_3 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004504 327.0
BYDH3_k127_7308170_4 TIGRFAM Acetolactate synthase, small subunit K01653 - 2.2.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001678 297.0
BYDH3_k127_7350587_0 AAA domain K02450 - - 2.537e-226 711.0
BYDH3_k127_7350587_1 Staphylococcal nuclease homologues - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006159 343.0
BYDH3_k127_7350587_2 Elongation factor Tu domain 2 K03833 - - 0.0000000000000000000000000000000000000000000000000000000000001593 214.0
BYDH3_k127_7352693_0 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003963 508.0
BYDH3_k127_7352693_1 ROK family K00845,K00847,K00884 - 2.7.1.2,2.7.1.4,2.7.1.59 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005272 409.0
BYDH3_k127_7352693_2 Protein of Unknown function (DUF2784) - - - 0.000000000000000000000000000000000000000000000003032 176.0
BYDH3_k127_7352693_3 Putative molybdenum carrier - - - 0.0000000000000000000000000000000003818 138.0
BYDH3_k127_7352693_4 - - - - 0.00000000000000000000009878 102.0
BYDH3_k127_7457898_0 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic K00058 - 1.1.1.399,1.1.1.95 2.967e-295 911.0
BYDH3_k127_7457898_1 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03106 - 3.6.5.4 2.592e-250 776.0
BYDH3_k127_7457898_10 AIR carboxylase K06898 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005724 383.0
BYDH3_k127_7457898_11 SAM-dependent RNA methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006212 310.0
BYDH3_k127_7457898_12 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006281,GO:0006298,GO:0006401,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0032299,GO:0032991,GO:0033554,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576 3.1.26.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006234 306.0
BYDH3_k127_7457898_13 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000005969 245.0
BYDH3_k127_7457898_14 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.000000000000000000000000000000000000000000000000000000000000003677 220.0
BYDH3_k127_7457898_15 Ribosomal protein S9/S16 K02996 - - 0.000000000000000000000000000000000000000003699 159.0
BYDH3_k127_7457898_16 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 - - 0.000000000000000000000000000000000000002166 149.0
BYDH3_k127_7457898_17 Ribosomal protein S16 K02959 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000303 144.0
BYDH3_k127_7457898_18 KH domain K06960 - - 0.0000000000000000000000000000000000003124 141.0
BYDH3_k127_7457898_19 Dodecin K09165 - - 0.000000000000000000000000000003737 120.0
BYDH3_k127_7457898_2 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease K02342 - 2.7.7.7 1.681e-211 666.0
BYDH3_k127_7457898_20 Nuclease-related domain K07460 - - 0.00000000000000000000000197 106.0
BYDH3_k127_7457898_3 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003688 602.0
BYDH3_k127_7457898_4 Protein of unknown function DUF111 K09121 - 4.99.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007242 542.0
BYDH3_k127_7457898_5 S-adenosylmethionine-dependent methyltransferase K06969 - 2.1.1.191 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000156 516.0
BYDH3_k127_7457898_6 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004801 494.0
BYDH3_k127_7457898_7 Belongs to the RNA methyltransferase TrmD family K00554 GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050518,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.228 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003209 430.0
BYDH3_k127_7457898_8 ABC transporter K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009701 430.0
BYDH3_k127_7457898_9 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009111 406.0
BYDH3_k127_7483308_0 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001084 519.0
BYDH3_k127_7483308_1 Enoyl-CoA hydratase/isomerase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007138 456.0
BYDH3_k127_7483308_2 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 GO:0006139,GO:0006401,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0016070,GO:0016072,GO:0016075,GO:0019439,GO:0034641,GO:0034655,GO:0034660,GO:0034661,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:1901360,GO:1901361,GO:1901575 2.7.7.56 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008622 426.0
BYDH3_k127_7483308_3 Ham1 family K02428 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009141,GO:0009143,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 3.6.1.66 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002881 304.0
BYDH3_k127_751637_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 0.0 1218.0
BYDH3_k127_751637_1 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K05807 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005078 586.0
BYDH3_k127_751637_2 Thioesterase superfamily K02614 - - 0.000000000000000000000000000000000000000000000000000000000000000000003845 236.0
BYDH3_k127_751637_3 Specifically methylates the N7 position of guanine in position 527 of 16S rRNA K03501 - 2.1.1.170 0.00000000000000000000000000000000000000000000000000000000000000006376 228.0
BYDH3_k127_751637_4 Thioredoxin K03671 - - 0.000000000000000000000000000000000000000000000000000000002218 200.0
BYDH3_k127_751637_5 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000002912 189.0
BYDH3_k127_751637_6 LexA DNA binding domain K01356 - 3.4.21.88 0.000000000000000000000000000000000000003 158.0
BYDH3_k127_751637_7 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.00000004076 57.0
BYDH3_k127_7527486_0 TIGRFAM Carbon-monoxide dehydrogenase, catalytic subunit K00198 - 1.2.7.4 0.0 1184.0
BYDH3_k127_7527486_1 PFAM 2Fe-2S iron-sulfur cluster binding domain - - - 1.401e-278 869.0
BYDH3_k127_7527486_2 Belongs to the glycosyl hydrolase 57 family K22451 - 2.4.1.25 6.966e-240 750.0
BYDH3_k127_7527486_3 PFAM CO dehydrogenase acetyl-CoA synthase delta subunit K00194 - 2.1.1.245 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003289 512.0
BYDH3_k127_7527486_4 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002672 488.0
BYDH3_k127_7527486_5 AAA domain K07321 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001612 382.0
BYDH3_k127_7527486_6 PFAM CO dehydrogenase acetyl-CoA synthase complex beta subunit K14138 - 2.3.1.169 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006717 265.0
BYDH3_k127_7527486_7 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000001043 202.0
BYDH3_k127_7527486_8 - - - - 0.00000000000000000000000001596 109.0
BYDH3_k127_7637400_0 NADH ubiquinone oxidoreductase, subunit G, iron-sulphur binding K00336,K18332 - 1.12.1.3,1.6.5.3 6.86e-248 776.0
BYDH3_k127_7637400_1 Aspartate ammonia-lyase K01744 - 4.3.1.1 3.979e-197 623.0
BYDH3_k127_7637400_2 Pyridine nucleotide-disulphide oxidoreductase K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003822 426.0
BYDH3_k127_7651209_0 Anaerobic ribonucleoside-triphosphate reductase K21636 - 1.1.98.6 0.0 1342.0
BYDH3_k127_7651209_1 ABC transporter K06158 - - 5.054e-295 917.0
BYDH3_k127_7651209_10 PFAM Universal stress protein family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001083 267.0
BYDH3_k127_7651209_11 Acyl-CoA synthetase (AMP-forming) AMP-acid ligase II K00666,K12508 - 6.2.1.34 0.000000000000000000000000000000000000000000000000000000000000000000000000000002215 275.0
BYDH3_k127_7651209_12 Creatinase/Prolidase N-terminal domain K01262 - 3.4.11.9 0.0000000000000000000000000000000000000000000000000000000000000000000000003454 248.0
BYDH3_k127_7651209_14 Uncharacterised protein family UPF0047 - - - 0.000000000000000000000000000000000000000000000000000000000002929 210.0
BYDH3_k127_7651209_15 COGs COG0318 Acyl-CoA synthetase (AMP-forming) AMP-acid ligase II K00666,K01897 - 6.2.1.3 0.0000000000000000000000000000000000000000000000000000002467 196.0
BYDH3_k127_7651209_16 - - - - 0.000000000000000000000000000000000000000000000000000004576 203.0
BYDH3_k127_7651209_17 Fe-S iron-sulfur cluster assembly protein, NifU family K04488 - - 0.000000000000000000000000000000000000000000000001189 183.0
BYDH3_k127_7651209_18 Transcriptional regulator K13643 - - 0.0000000000000000000000000000000000000009568 151.0
BYDH3_k127_7651209_19 D-isomer specific 2-hydroxyacid dehydrogenase catalytic K00058 - 1.1.1.399,1.1.1.95 0.000000000000000000000000000000005761 130.0
BYDH3_k127_7651209_2 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 1.537e-284 878.0
BYDH3_k127_7651209_20 Does not function as a glutathione-disulfide oxidoreductase in the presence of glutathione and glutathione reductase. Has low thioredoxin activity in vitro - GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0015035,GO:0015036,GO:0016491,GO:0016667,GO:0055114 - 0.0000228 50.0
BYDH3_k127_7651209_3 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 2.656e-238 740.0
BYDH3_k127_7651209_4 Aminotransferase class-V - - - 3.281e-202 633.0
BYDH3_k127_7651209_5 Alginate O-acetylation protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000285 516.0
BYDH3_k127_7651209_6 PFAM Xylose isomerase domain-containing protein TIM barrel - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000134 435.0
BYDH3_k127_7651209_7 4Fe-4S single cluster domain K04069 - 1.97.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005167 418.0
BYDH3_k127_7651209_8 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00058 - 1.1.1.399,1.1.1.95 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001122 417.0
BYDH3_k127_7651209_9 HAD-hyrolase-like K01091 - 3.1.3.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003748 301.0
BYDH3_k127_7689092_0 Outer membrane efflux protein K12340 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000343 587.0
BYDH3_k127_7689092_1 AAA domain, putative AbiEii toxin, Type IV TA system K01990,K09695 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005438 468.0
BYDH3_k127_7689092_2 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001103 461.0
BYDH3_k127_7689092_3 HlyD family secretion protein K01993 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001186 444.0
BYDH3_k127_7689092_4 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000000000000000000000000000002853 202.0
BYDH3_k127_7696005_0 histidine kinase A domain protein - - - 1.578e-267 829.0
BYDH3_k127_7696005_1 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 7.141e-220 685.0
BYDH3_k127_7696005_2 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 GO:0002097,GO:0002099,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016853,GO:0018130,GO:0019438,GO:0034404,GO:0034470,GO:0034641,GO:0034654,GO:0034660,GO:0042455,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0051075,GO:0055086,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.99.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003909 524.0
BYDH3_k127_7696005_3 Binds together with S18 to 16S ribosomal RNA K02990 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0019843,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070181,GO:0097159,GO:1901363,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000001449 204.0
BYDH3_k127_7696005_4 TIGRFAM preprotein translocase, YajC subunit K03210 - - 0.0000000000000000000000000000000004049 134.0
BYDH3_k127_7696005_5 HDOD domain - - - 0.0000000000000000000000001448 119.0
BYDH3_k127_7741704_0 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 2.691e-229 714.0
BYDH3_k127_7741704_1 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 1.041e-199 626.0
BYDH3_k127_7741704_2 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001207 401.0
BYDH3_k127_7741704_3 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 GO:0000906,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.78 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002831 301.0
BYDH3_k127_7741704_4 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004516 277.0
BYDH3_k127_7741704_5 MafB19-like deaminase K01493 - 3.5.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000002168 254.0
BYDH3_k127_7741704_6 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K05606 - 5.1.99.1 0.0000000000000000000000000000000000000000000000000000000000000000005219 230.0
BYDH3_k127_7741704_7 NusB family K03625 - - 0.00000000000000000000000000000000000000000000000000000001003 200.0
BYDH3_k127_7741704_8 YacP-like NYN domain K06962 - - 0.0000000000000000000000000000000000000000000000000000002064 199.0
BYDH3_k127_7741704_9 PFAM CBS domain K04767 - - 0.000000000000000000000000000000000000001799 151.0
BYDH3_k127_7751637_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.0 1606.0
BYDH3_k127_7751637_1 Pyridoxamine 5'-phosphate oxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001325 246.0
BYDH3_k127_7751637_2 NapC/NirT cytochrome c family, N-terminal region - - - 0.00000000000000000000000000000000000156 151.0
BYDH3_k127_7782869_0 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008612 334.0
BYDH3_k127_7782869_1 Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001509 293.0
BYDH3_k127_7782869_3 ubiE/COQ5 methyltransferase family K07755 - 2.1.1.137 0.00000000000000000000000000000000000000000000006155 171.0
BYDH3_k127_7782869_4 FCD - - - 0.0000000000000000000000000000000004105 138.0
BYDH3_k127_7782869_6 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000002157 54.0
BYDH3_k127_7804043_0 His Kinase A (phosphoacceptor) domain K10125 - 2.7.13.3 5.148e-252 790.0
BYDH3_k127_7804043_1 Domain of unknown function (DUF4921) K00965 - 2.7.7.12 3.922e-208 648.0
BYDH3_k127_7804043_2 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 - 2.4.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002366 558.0
BYDH3_k127_7804043_3 curli production assembly transport component CsgG - - - 0.00000000000000000000000000000000000000000000000000000000000000000145 231.0
BYDH3_k127_7804043_4 curli production assembly transport component CsgG - - - 0.000000000000000000000000000000000000000000000000000000000000001381 220.0
BYDH3_k127_7804043_5 cheY-homologous receiver domain - - - 0.00000000000000000000000000000000000000000000000000000003117 199.0
BYDH3_k127_7804043_6 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 - 2.4.1.21 0.00000000000000000000000000000000000000000000000000001958 192.0
BYDH3_k127_7804043_7 Rhomboid family - - - 0.00000000000000000000000000000000000000000000000000005787 190.0
BYDH3_k127_7814774_0 Malic enzyme, NAD binding domain K00027,K00029 - 1.1.1.38,1.1.1.40 5.423e-262 810.0
BYDH3_k127_7814774_1 Myo-inositol-1-phosphate synthase K01858 - 5.5.1.4 2.045e-205 642.0
BYDH3_k127_7814774_2 TIGRFAM hydro-lyases, Fe-S type, tartrate fumarate subfamily, alpha region K01677 - 4.2.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001962 478.0
BYDH3_k127_7814774_3 TIGRFAM hydro-lyases, Fe-S type, tartrate fumarate subfamily, beta region K01678 - 4.2.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005179 316.0
BYDH3_k127_7814774_4 CDP-alcohol phosphatidyltransferase K00995 - 2.7.8.5 0.00000000000000000000000000000000000000000000000000000000000000004039 227.0
BYDH3_k127_7821374_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 1.165e-223 696.0
BYDH3_k127_7821374_1 PFAM Aminotransferase class I and II K00812 - 2.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000014 595.0
BYDH3_k127_7821374_2 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001935 569.0
BYDH3_k127_7821374_3 PFAM Pyruvate kinase, alpha beta domain K09126 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005257 296.0
BYDH3_k127_7821374_4 - - - - 0.0000000000000000000000000000000000000000000000000000000000000006926 223.0
BYDH3_k127_7821374_5 - - - - 0.0000000000000000000000000000000000000000000000000000000003397 203.0
BYDH3_k127_7821374_6 TIGRFAM regulatory protein, FmdB - - - 0.0000000000000261 74.0
BYDH3_k127_7830794_0 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03182 - 4.1.1.98 2.82e-218 687.0
BYDH3_k127_7830794_11 Transcriptional regulatory protein, C terminal - - - 0.0001618 50.0
BYDH3_k127_7830794_2 PFAM Radical SAM K04069 - 1.97.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000495 425.0
BYDH3_k127_7830794_3 TIGRFAM signal peptide peptidase SppA, 36K type K04773 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007754 349.0
BYDH3_k127_7830794_4 PFAM ADP-ribosylglycohydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006134 325.0
BYDH3_k127_7830794_5 Lysin motif - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002109 277.0
BYDH3_k127_7830794_6 HD domain - - - 0.00000000000000000000000000000000000000000000000000000001514 201.0
BYDH3_k127_7830794_7 PFAM flavin reductase domain protein, FMN-binding - - - 0.00000000000000000000000000000000000000000000000000000004767 202.0
BYDH3_k127_7830794_8 Bacterial protein of unknown function (DUF882) - - - 0.000000000000000000000000000000000006706 144.0
BYDH3_k127_7830794_9 - - - - 0.0000000000000001721 81.0
BYDH3_k127_7865939_0 Homocysteine biosynthesis enzyme, sulfur-incorporation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002303 569.0
BYDH3_k127_7865939_1 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006721,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016114,GO:0016491,GO:0016614,GO:0016616,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0030145,GO:0030604,GO:0032787,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046490,GO:0046872,GO:0046914,GO:0048037,GO:0050661,GO:0050662,GO:0051483,GO:0051484,GO:0055114,GO:0070402,GO:0071704,GO:0090407,GO:0097159,GO:1901135,GO:1901265,GO:1901363,GO:1901576 1.1.1.267 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002615 559.0
BYDH3_k127_7865939_10 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 GO:0002181,GO:0002184,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043021,GO:0043023,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0044877,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.00000001915 55.0
BYDH3_k127_7865939_2 cysteine synthase A K01738 - 2.5.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003179 500.0
BYDH3_k127_7865939_3 Cytidylyltransferase family K00981 - 2.7.7.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002492 411.0
BYDH3_k127_7865939_4 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 GO:0002094,GO:0003674,GO:0003824,GO:0004659,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006066,GO:0006629,GO:0006720,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016093,GO:0016094,GO:0016740,GO:0016765,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046165,GO:0071704,GO:1901576,GO:1901615,GO:1901617 2.5.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007779 380.0
BYDH3_k127_7865939_5 PDZ domain (Also known as DHR or GLGF) K11749 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001091 346.0
BYDH3_k127_7865939_6 Phosphate-starvation-inducible E - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000114 287.0
BYDH3_k127_7865939_8 Glycoprotease K14742 - - 0.0000000000000000000000001356 115.0
BYDH3_k127_7865939_9 - - - - 0.0000000000000000000001186 104.0
BYDH3_k127_7866664_0 TIGRFAM TRAP transporter, 4TM 12TM fusion protein - - - 1.253e-273 856.0
BYDH3_k127_7866664_1 AMP-binding enzyme K01897 - 6.2.1.3 5.361e-262 819.0
BYDH3_k127_7866664_10 Involved in the biosynthesis of porphyrin-containing compound - - - 0.000000000000000000000000000000000000000000000000000000005286 201.0
BYDH3_k127_7866664_11 acetyltransferases and hydrolases with the alpha beta hydrolase fold - - - 0.000000000000000000000000000000007966 130.0
BYDH3_k127_7866664_2 Vacuole effluxer Atg22 like K06902 - - 3.821e-195 616.0
BYDH3_k127_7866664_3 Protein of unknown function (DUF933) K06942 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008289 565.0
BYDH3_k127_7866664_4 Coenzyme A transferase K01039 - 2.8.3.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001723 522.0
BYDH3_k127_7866664_5 Acyl-transferase K00655 - 2.3.1.51 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001072 496.0
BYDH3_k127_7866664_6 Coenzyme A transferase K01040 - 2.8.3.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002746 414.0
BYDH3_k127_7866664_7 TIGRFAM TRAP transporter solute receptor, TAXI family K07080 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005152 394.0
BYDH3_k127_7866664_8 Predicted membrane protein (DUF2238) K08984 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006259 268.0
BYDH3_k127_7866664_9 - - - - 0.00000000000000000000000000000000000000000000000000000000000001552 221.0
BYDH3_k127_7896862_0 Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity K03782 GO:0000302,GO:0003674,GO:0003824,GO:0004096,GO:0004601,GO:0005488,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009056,GO:0009636,GO:0009987,GO:0010035,GO:0016209,GO:0016491,GO:0016684,GO:0016999,GO:0017001,GO:0017144,GO:0020037,GO:0033554,GO:0034599,GO:0034614,GO:0035690,GO:0042221,GO:0042493,GO:0042542,GO:0042737,GO:0042743,GO:0042744,GO:0044237,GO:0044248,GO:0044424,GO:0044444,GO:0044464,GO:0046677,GO:0046906,GO:0048037,GO:0050896,GO:0051186,GO:0051187,GO:0051716,GO:0055114,GO:0070301,GO:0070887,GO:0071236,GO:0072593,GO:0097159,GO:0097237,GO:0098754,GO:0098869,GO:1901363,GO:1901700,GO:1901701,GO:1990748 1.11.1.21 4.126e-241 749.0
BYDH3_k127_7896862_1 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001061 255.0
BYDH3_k127_7896862_2 Protein of unknown function, DUF488 - - - 0.0000000000000000000000000000000000000000000000007298 179.0
BYDH3_k127_7896862_4 Cysteine-rich secretory protein family - - - 0.000000000000004083 76.0
BYDH3_k127_7907224_0 Molydopterin dinucleotide binding domain K00123 - 1.17.1.9 2.171e-281 871.0
BYDH3_k127_7907224_1 benzoate-CoA ligase K04110 - 6.2.1.25 6.073e-229 719.0
BYDH3_k127_7907224_2 Sodium:solute symporter family K03307 - - 3.933e-217 681.0
BYDH3_k127_7907224_3 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001099 524.0
BYDH3_k127_7907224_4 Belongs to the NiFe NiFeSe hydrogenase large subunit family K06281 - 1.12.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002822 518.0
BYDH3_k127_7907224_5 Formate/nitrite transporter K06212,K21993 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003529 500.0
BYDH3_k127_7907224_6 Belongs to the enoyl-CoA hydratase isomerase family K15866 - 5.3.3.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001178 347.0
BYDH3_k127_7907224_7 TIGRFAM hydrogenase (NiFe) small subunit (hydA) K06282 - 1.12.99.6 0.00000000000000000000000000000000000000000000000000000000000000000000005545 250.0
BYDH3_k127_7907224_8 hydrogenase maturation protease K03605 - - 0.00000000000000000001696 97.0
BYDH3_k127_7907224_9 PFAM Stage II sporulation protein E (SpoIIE) - - - 0.0001621 46.0
BYDH3_k127_7949929_0 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 0.0 1003.0
BYDH3_k127_7949929_1 Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005483 441.0
BYDH3_k127_7949929_2 peptidase M24 K01262,K01271 - 3.4.11.9,3.4.13.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001333 288.0
BYDH3_k127_7949929_3 TIGRFAM HAD-superfamily hydrolase, subfamily IA, variant 3 K07025 - - 0.0000000000000000000000000000000000000000000000000000000000004524 218.0
BYDH3_k127_7949929_4 GDSL-like Lipase/Acylhydrolase family - - - 0.000000000000000000000000000000000000000000000000000000009199 205.0
BYDH3_k127_7958406_0 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead K03520 - 1.2.5.3 0.0 1251.0
BYDH3_k127_7958406_1 AMP-binding enzyme C-terminal domain K02363 - 2.7.7.58,6.3.2.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001166 525.0
BYDH3_k127_7958406_2 Bacterial extracellular solute-binding protein, family 7 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004668 450.0
BYDH3_k127_7958406_3 xanthine dehydrogenase activity K11178 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0008150,GO:0008152,GO:0016491,GO:0016903,GO:0036094,GO:0042597,GO:0043167,GO:0043168,GO:0044464,GO:0048037,GO:0050660,GO:0050662,GO:0055114,GO:0097159,GO:1901265,GO:1901363 1.17.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000317 377.0
BYDH3_k127_7958406_4 Uncharacterized protein family UPF0016 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007786 344.0
BYDH3_k127_7958406_5 helix_turn_helix isocitrate lyase regulation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001588 306.0
BYDH3_k127_7958406_6 [2Fe-2S] binding domain K03518 - 1.2.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000008407 247.0
BYDH3_k127_7958406_7 Uncharacterised protein family UPF0047 - - - 0.00000000000000000000000000000000000000000000000000000000001221 207.0
BYDH3_k127_8006245_0 Belongs to the PEP-utilizing enzyme family K01006 - 2.7.9.1 0.0 1448.0
BYDH3_k127_8006245_1 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 3.337e-251 781.0
BYDH3_k127_8006245_2 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K09765 - 1.17.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000948 270.0
BYDH3_k127_8006245_3 Rhodanese Homology Domain - - - 0.0000000000000000000000007529 108.0
BYDH3_k127_8006245_4 Protein of unknown function (DUF2905) - - - 0.000000000000000000004151 94.0
BYDH3_k127_8065120_0 probably responsible for the translocation of the substrate across the membrane K02037,K02038 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009733 497.0
BYDH3_k127_8065120_1 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003921 458.0
BYDH3_k127_8065120_2 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008426 432.0
BYDH3_k127_8065120_3 Binding-protein-dependent transport system inner membrane component K02038 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007775 369.0
BYDH3_k127_8065120_4 PFAM Aldehyde ferredoxin oxidoreductase - - - 0.000000000000000000000000000000000000000000007353 167.0
BYDH3_k127_8065120_5 PBP superfamily domain K02040 - - 0.000000000000000000000000000000000000001808 150.0
BYDH3_k127_8065120_6 Binding-protein-dependent transport system inner membrane component K02038 - - 0.00000000000000000000000006475 107.0
BYDH3_k127_808268_0 PFAM 4-hydroxyphenylacetate 3-hydroxylase K14534 - 4.2.1.120,5.3.3.3 1.468e-292 900.0
BYDH3_k127_808268_1 ATP-grasp domain K01903 - 6.2.1.5 2.376e-217 677.0
BYDH3_k127_808268_2 CoA-ligase K01902 - 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001164 500.0
BYDH3_k127_808268_3 FCD - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001323 396.0
BYDH3_k127_808268_4 Redoxin - - - 0.00000000000000000000000000002383 118.0
BYDH3_k127_808268_5 Malic enzyme, NAD binding domain K00027,K00029 - 1.1.1.38,1.1.1.40 0.00000000001337 65.0
BYDH3_k127_8143348_0 Prismane/CO dehydrogenase family K00198 - 1.2.7.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007573 507.0
BYDH3_k127_8143348_1 Major facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005853 443.0
BYDH3_k127_8143348_2 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD K03767,K03768 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006186 272.0
BYDH3_k127_8143348_3 Major facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000001985 169.0
BYDH3_k127_8143348_4 AAA domain K07028 - - 0.0000000000000000005476 87.0
BYDH3_k127_8191136_0 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001578 453.0
BYDH3_k127_8191136_2 Protein of unknown function (DUF1566) - - - 0.000000000000000000000000000000009334 137.0
BYDH3_k127_8191136_3 Enoyl-CoA hydratase/isomerase - - - 0.00000000000000000001647 91.0
BYDH3_k127_8202966_0 L,D-transpeptidase catalytic domain K16291 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004794 604.0
BYDH3_k127_8202966_1 Helix-turn-helix - - - 0.000000000004423 69.0
BYDH3_k127_8202966_2 - - - - 0.0000004916 57.0
BYDH3_k127_8253145_0 PFAM peptidase M48 Ste24p K07387 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001439 297.0
BYDH3_k127_8253145_1 Transglycosylase SLT domain K08309 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001517 258.0
BYDH3_k127_8253145_2 PFAM Uncharacterised protein, DegV family COG1307 - - - 0.0000000000000000000000000000000000000000000000000000000000000002138 230.0
BYDH3_k127_8253145_4 PFAM small multidrug resistance protein K11741 - - 0.00000000001399 64.0
BYDH3_k127_8253145_5 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00002191 47.0
BYDH3_k127_8300918_0 TIGRFAM molybdenum cofactor synthesis domain K03750,K07219 - 2.10.1.1 9.54e-310 959.0
BYDH3_k127_8300918_1 TIGRFAM molybdenum cofactor synthesis domain K03750 - 2.10.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003364 597.0
BYDH3_k127_8300918_10 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001618 256.0
BYDH3_k127_8300918_11 Zinc-binding dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004843 256.0
BYDH3_k127_8300918_12 Histidine kinase-like ATPases - - - 0.000000000000000000000000000000000000000000000000000000000000000005377 254.0
BYDH3_k127_8300918_13 MOSC domain - - - 0.00000000000000000000000000000000000000000000000000001141 192.0
BYDH3_k127_8300918_14 - - - - 0.00000000000000000000000000000003273 139.0
BYDH3_k127_8300918_2 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 GO:0003674,GO:0003824,GO:0006732,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0018130,GO:0019538,GO:0019637,GO:0019720,GO:0043170,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0046483,GO:0051186,GO:0051188,GO:0051189,GO:0071704,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.99.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004671 539.0
BYDH3_k127_8300918_3 Transglutaminase/protease-like homologues - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004355 479.0
BYDH3_k127_8300918_4 Uncharacterised conserved protein (DUF2156) K01163 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009213 460.0
BYDH3_k127_8300918_5 PFAM Sodium sulphate symporter K14445 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009338 460.0
BYDH3_k127_8300918_6 PFAM ATPase associated with various cellular activities AAA_3 K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007041 447.0
BYDH3_k127_8300918_7 Protein of unknown function DUF58 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001312 301.0
BYDH3_k127_8300918_8 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007149 266.0
BYDH3_k127_8300918_9 molybdenum cofactor K03638,K03831 - 2.7.7.75 0.00000000000000000000000000000000000000000000000000000000000000000000000000727 254.0
BYDH3_k127_8316486_0 GMP synthase C terminal domain K01951 - 6.3.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001981 541.0
BYDH3_k127_8316486_1 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007027 304.0
BYDH3_k127_8316486_2 - - - - 0.00000000000000000000000000000000000002702 146.0
BYDH3_k127_8316486_3 Helix-hairpin-helix motif - - - 0.00000000000000000000000000002623 118.0
BYDH3_k127_8316486_4 Bacterial protein of unknown function (DUF937) - - - 0.00000000000000000000008492 100.0
BYDH3_k127_8316486_5 Bacterial protein of unknown function (DUF937) - - - 0.000000001097 59.0
BYDH3_k127_8439284_0 7TM-HD extracellular K07037 - - 5.348e-286 886.0
BYDH3_k127_8439284_1 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 1.409e-203 645.0
BYDH3_k127_8439284_2 PhoH-like protein K06217 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002209 388.0
BYDH3_k127_8439284_3 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K01489,K03474,K03595,K07042 GO:0000469,GO:0000478,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004540,GO:0005488,GO:0006139,GO:0006355,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016070,GO:0016072,GO:0016151,GO:0016787,GO:0016788,GO:0016892,GO:0016894,GO:0019219,GO:0019222,GO:0019538,GO:0022613,GO:0030490,GO:0031323,GO:0031326,GO:0031554,GO:0031564,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042274,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043244,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0046483,GO:0046872,GO:0046914,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1903506,GO:2000112,GO:2001141 2.6.99.2,3.5.4.5 0.00000000000000000000000005883 116.0
BYDH3_k127_8443477_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 1.922e-226 703.0
BYDH3_k127_8443477_1 TIGRFAM HAD-superfamily hydrolase, subfamily IA, variant - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003323 332.0
BYDH3_k127_8443477_2 COGs COG4087 Soluble P-type ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009827 269.0
BYDH3_k127_8443477_3 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.0000000000000000000000000000002934 127.0
BYDH3_k127_8453268_0 PFAM 2Fe-2S iron-sulfur cluster binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008732 564.0
BYDH3_k127_8453268_1 FAD linked oxidase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004618 295.0
BYDH3_k127_8453268_2 Cysteine-rich domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002734 263.0
BYDH3_k127_8453268_3 FAD linked oxidase domain protein K00104 - 1.1.3.15 0.000000000000000000000000000000000000000000003462 183.0
BYDH3_k127_8453268_4 DNA-binding transcription factor activity - - - 0.0000000000000000000000000000000000000003898 154.0
BYDH3_k127_8453268_5 Uroporphyrinogen decarboxylase (URO-D) K01599 - 4.1.1.37 0.000000000003899 76.0
BYDH3_k127_8488631_0 PFAM Acyl-CoA dehydrogenase K00248 - 1.3.8.1 2.855e-228 709.0
BYDH3_k127_8488631_1 Fatty acid synthesis protein K03621 - 2.3.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001234 531.0
BYDH3_k127_8488631_2 TIGRFAM malonyl CoA-acyl carrier protein transacylase K00645 - 2.3.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000486 506.0
BYDH3_k127_8488631_3 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007452 289.0
BYDH3_k127_8488631_4 Uncharacterized ACR, COG1399 K07040 - - 0.000000000000000000000000000000000000000000000000000622 186.0
BYDH3_k127_8488631_5 Belongs to the bacterial ribosomal protein bL32 family K02911 - - 0.00000000000000001131 83.0
BYDH3_k127_8554931_0 Acyl-CoA synthetase (AMP-forming) AMP-acid ligase II K00666 - - 4.632e-281 869.0
BYDH3_k127_8554931_1 Acyl-CoA dehydrogenase, C-terminal domain - - - 1.063e-211 662.0
BYDH3_k127_8554931_2 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K03307 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004866 594.0
BYDH3_k127_8554931_3 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.000000000000000000000000000000003021 130.0
BYDH3_k127_8604125_0 Bacterial extracellular solute-binding protein, family 7 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001262 437.0
BYDH3_k127_8604125_1 LVIVD repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001044 344.0
BYDH3_k127_8604125_2 4Fe-4S double cluster binding domain K03863 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002084 258.0
BYDH3_k127_8604125_3 Putative TM nitroreductase - - - 0.000000000000000000005306 96.0
BYDH3_k127_8604125_4 Transcriptional regulator - - - 0.0000000000000000002711 97.0
BYDH3_k127_8618986_0 His Kinase A (phosphoacceptor) domain - - - 1.867e-277 875.0
BYDH3_k127_8618986_1 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 5.026e-238 740.0
BYDH3_k127_8618986_10 Conserved hypothetical protein 95 K08316 - 2.1.1.171 0.00000000000000000000000000000000000000000000000000000000000006978 218.0
BYDH3_k127_8618986_11 TIGRFAM hydrolase, TatD family K03424 - - 0.000000000000000000000000000000000000000000000000001888 184.0
BYDH3_k127_8618986_12 Domain of unknown function (DUF1844) - - - 0.000000000000000000000000000000000000000000000000004935 183.0
BYDH3_k127_8618986_2 Prismane/CO dehydrogenase family K00198 - 1.2.7.4 2.863e-232 720.0
BYDH3_k127_8618986_3 Belongs to the peptidase S1C family K04771 - 3.4.21.107 1.532e-215 678.0
BYDH3_k127_8618986_4 NfeD-like C-terminal, partner-binding K07403 - - 2.824e-195 618.0
BYDH3_k127_8618986_5 Beta-lactamase enzyme family K01286,K07258,K07262 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002679 583.0
BYDH3_k127_8618986_6 Anion-transporting ATPase K01551 - 3.6.3.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002264 554.0
BYDH3_k127_8618986_7 PFAM Band 7 protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006562 403.0
BYDH3_k127_8618986_8 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 GO:0003674,GO:0003824,GO:0004595,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005189 286.0
BYDH3_k127_8698919_0 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000465 614.0
BYDH3_k127_8698919_1 CobQ/CobB/MinD/ParA nucleotide binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002129 486.0
BYDH3_k127_8698919_2 Metallo-beta-lactamase superfamily K06897 - 2.5.1.105 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003285 481.0
BYDH3_k127_8698919_3 ATPase MipZ - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002826 441.0
BYDH3_k127_8698919_4 Putative heavy-metal chelation K09138 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005015 270.0
BYDH3_k127_8698919_5 PFAM Cyclic nucleotide-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000001252 235.0
BYDH3_k127_8698919_6 NifU-like N terminal domain K04488 - - 0.000000000000000000000000000000000000000000000000006272 183.0
BYDH3_k127_8698919_7 RsbT co-antagonist protein rsbRD N-terminal domain - - - 0.0000000000000000000000000000000003262 139.0
BYDH3_k127_8698919_8 Mo-molybdopterin cofactor metabolic process K03154 - - 0.00000000000000000000008499 100.0
BYDH3_k127_8698919_9 Dinitrogenase iron-molybdenum cofactor - - - 0.00000000000003507 72.0
BYDH3_k127_8743295_0 Involved in the TonB-independent uptake of proteins K03641 GO:0003674,GO:0005215,GO:0006810,GO:0008150,GO:0019534,GO:0022857,GO:0051179,GO:0051234,GO:0055085,GO:1901998 - 5.445e-227 708.0
BYDH3_k127_8743295_1 Belongs to the RtcB family K14415 - 6.5.1.3 2.539e-198 622.0
BYDH3_k127_8743295_10 Belongs to the TPP enzyme family K01637 - 4.1.3.1 0.0000000000000000000000000002953 130.0
BYDH3_k127_8743295_11 - - - - 0.0002475 53.0
BYDH3_k127_8743295_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001117 584.0
BYDH3_k127_8743295_3 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003455 432.0
BYDH3_k127_8743295_4 Orotidine 5'-phosphate decarboxylase / HUMPS family K01591 GO:0003674,GO:0003824,GO:0004590,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006206,GO:0006207,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019856,GO:0034641,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046112,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008615 408.0
BYDH3_k127_8743295_5 Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids K19221 - 2.5.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000005992 243.0
BYDH3_k127_8743295_6 Transcriptional regulator, LysR - - - 0.00000000000000000000000000000000000000000000000000000000000005358 224.0
BYDH3_k127_8743295_7 Belongs to the RtcB family K14415 - 6.5.1.3 0.000000000000000000000000000000000000000000000001326 176.0
BYDH3_k127_8743295_8 Archease protein family (MTH1598/TM1083) - - - 0.00000000000000000000000000000000000000001638 158.0
BYDH3_k127_8743295_9 Specifically methylates the ribose of guanosine 2251 in 23S rRNA K03218 GO:0000154,GO:0000451,GO:0000453,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070039,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.185 0.00000000000000000000000000000000158 138.0
BYDH3_k127_8807263_0 Belongs to the class-II aminoacyl-tRNA synthetase family K01868 GO:0003674,GO:0003824,GO:0004812,GO:0004829,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006435,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.3 0.0 1062.0
BYDH3_k127_8807263_1 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002467 588.0
BYDH3_k127_8807263_3 TIGRFAM phenylalanyl-tRNA synthetase, beta subunit K01890 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002475 318.0
BYDH3_k127_8807263_4 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0006996,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016043,GO:0019538,GO:0022411,GO:0032790,GO:0032984,GO:0032988,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903008 - 0.00000000000000000000000000000000000000000000000000000000000000000000000001728 254.0
BYDH3_k127_8807263_5 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015934,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042273,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.0000000000000000000000000000000000000000001657 161.0
BYDH3_k127_8807263_6 mercury ion transmembrane transporter activity K07213 - - 0.000000000000000000000004229 103.0
BYDH3_k127_8807263_7 Belongs to the bacterial ribosomal protein bL35 family K02916 - - 0.00000000000000004335 82.0
BYDH3_k127_8807263_8 Linear amide C-N hydrolases, choloylglycine hydrolase family K01442 - 3.5.1.24 0.0000000000893 72.0
BYDH3_k127_8807263_9 Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase - - - 0.00000007233 58.0
BYDH3_k127_8876480_0 PFAM Integral membrane protein TerC - - - 0.000000000000000000000000000000000000000000000000000000000003376 218.0
BYDH3_k127_8876480_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000001787 228.0
BYDH3_k127_8876480_2 PFAM aminotransferase, class I and II K14155 - 4.4.1.8 0.00000000000000000000000000000000000000009613 154.0
BYDH3_k127_8876480_3 protein kinase activity - - - 0.0000000000000000000000000000000216 133.0
BYDH3_k127_8886146_0 4Fe-4S binding domain - - - 5.758e-247 768.0
BYDH3_k127_8886146_1 Probable RNA and SrmB- binding site of polymerase A K00970 - 2.7.7.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002897 597.0
BYDH3_k127_8886146_2 Domain of unknown function (DUF362) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001359 471.0
BYDH3_k127_8886146_3 CobW/HypB/UreG, nucleotide-binding domain K04652 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002488 306.0
BYDH3_k127_8886146_4 Probably plays a role in a hydrogenase nickel cofactor insertion step K04651 - - 0.000000000000000000000000000000000000000000000001001 176.0
BYDH3_k127_8886146_5 - - - - 0.0000000000000000000000000001575 117.0
BYDH3_k127_8911314_0 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006442 411.0
BYDH3_k127_8911314_1 Belongs to the D-glutamate cyclase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002989 344.0
BYDH3_k127_8911314_2 ABC transporter K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001095 286.0
BYDH3_k127_8911314_3 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.00000000000000000000000000000000000000000000000000000000000001473 224.0
BYDH3_k127_8911314_4 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.000000000000000000000000000000000000000000000000005995 188.0
BYDH3_k127_8916062_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 GO:0000166,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.1.1.16 8.459e-245 761.0
BYDH3_k127_8916062_1 TIGRFAM polar amino acid ABC transporter, inner membrane subunit K02029,K10003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001017 361.0
BYDH3_k127_8916062_2 TIGRFAM polar amino acid ABC transporter, inner membrane subunit K02029,K10002 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007315 356.0
BYDH3_k127_8916062_3 Belongs to the bacterial solute-binding protein 3 family K02030,K10001 - - 0.000000000000006419 74.0
BYDH3_k127_8951048_0 arsenite transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002778 480.0
BYDH3_k127_8951048_1 Produces ATP from ADP in the presence of a proton gradient across the membrane K02120 - - 0.000000000000000000000000000000000000000000000000000000000000000000004904 237.0
BYDH3_k127_8951048_2 Cytidylate kinase-like family - - - 0.0000000000000000000000000000000000000000000000000000000000045 217.0
BYDH3_k127_897101_0 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004548 391.0
BYDH3_k127_897101_1 TIGRFAM competence damage-inducible protein CinA K03742,K03743 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006139,GO:0006259,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363 3.5.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000284 256.0
BYDH3_k127_897101_2 Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP K01496,K11755 - 3.5.4.19,3.6.1.31 0.000000000000000000000000000000000000000000000000000000000000000000001656 238.0
BYDH3_k127_897101_3 LigT like Phosphoesterase K01975 - 3.1.4.58 0.0000000000000000000000000000000000000000000000000000004948 198.0
BYDH3_k127_897101_4 Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG) K01095 - 3.1.3.27 0.0000000000000000000004027 104.0
BYDH3_k127_8982856_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1443.0
BYDH3_k127_8982856_1 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 7.312e-314 963.0
BYDH3_k127_8982856_10 Uncharacterised ArCR, COG2043 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009411 368.0
BYDH3_k127_8982856_11 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003947 340.0
BYDH3_k127_8982856_12 Heat shock 70 kDa protein K04043 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000007954 251.0
BYDH3_k127_8982856_13 ATP-grasp domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000003376 238.0
BYDH3_k127_8982856_14 binds to the 23S rRNA K02939 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000003444 235.0
BYDH3_k127_8982856_15 CDP-alcohol phosphatidyltransferase K08744 - 2.7.8.41 0.00000000000000000000000000000000000000000000000000000000000005741 217.0
BYDH3_k127_8982856_16 PFAM Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000001269 229.0
BYDH3_k127_8982856_17 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 GO:0003674,GO:0003824,GO:0004798,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009165,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.4.9 0.00000000000000000000000000000000000000000000000000000008749 201.0
BYDH3_k127_8982856_18 FKBP-type peptidyl-prolyl cis-trans isomerase K01802 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000206 194.0
BYDH3_k127_8982856_19 Domain of unknown function (DUF296) - - - 0.00000000000000000000000000000000000000000000000000002693 191.0
BYDH3_k127_8982856_2 it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins K02314 - 3.6.4.12 2.835e-229 716.0
BYDH3_k127_8982856_20 Creatinase/Prolidase N-terminal domain K01262,K01271 - 3.4.11.9,3.4.13.9 0.0000000000000000000000000000000000000000000002365 168.0
BYDH3_k127_8982856_21 Protein of unknown function (DUF721) - - - 0.000000000000000000000000000000000000000001769 157.0
BYDH3_k127_8982856_22 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000002208 144.0
BYDH3_k127_8982856_23 Preprotein translocase SecG subunit K03075 - - 0.00000000000000000000000000000000805 128.0
BYDH3_k127_8982856_24 Ribosomal protein S21 K02970 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000006832 105.0
BYDH3_k127_8982856_3 Belongs to the phosphoglycerate kinase family K00927 - 2.7.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002304 606.0
BYDH3_k127_8982856_4 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001171 597.0
BYDH3_k127_8982856_5 CoA binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005946 548.0
BYDH3_k127_8982856_6 DNA polymerase III, delta prime subunit K02341 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006594 429.0
BYDH3_k127_8982856_7 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006753 413.0
BYDH3_k127_8982856_8 PSP1 C-terminal conserved region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002544 402.0
BYDH3_k127_8982856_9 Creatinase/Prolidase N-terminal domain K01262,K01271 - 3.4.11.9,3.4.13.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000285 376.0
BYDH3_k127_8994364_0 Inorganic H+ pyrophosphatase K15987 - 3.6.1.1 0.0 1385.0
BYDH3_k127_8994364_1 Probable RNA and SrmB- binding site of polymerase A K00970,K00974 - 2.7.7.19,2.7.7.72 7.319e-206 647.0
BYDH3_k127_8994364_2 PFAM sigma-54 factor interaction domain-containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001329 533.0
BYDH3_k127_8994364_3 Enoyl-(Acyl carrier protein) reductase K00019 - 1.1.1.30 0.00000000000000000000000000000000000002777 145.0
BYDH3_k127_8994364_4 Catalyzes the phosphorolysis of diverse nucleosides, yielding D-ribose 1-phosphate and the respective free bases. Can use uridine, adenosine, guanosine, cytidine, thymidine, inosine and xanthosine as substrates. Also catalyzes the reverse reactions K09913 - 2.4.2.1,2.4.2.2 0.0000000000000000000000003741 108.0
BYDH3_k127_8997589_0 Phosphofructokinase K21071 - 2.7.1.11,2.7.1.90 4.181e-198 623.0
BYDH3_k127_8997589_1 PFAM DRTGG domain - - - 0.0000000000000000000000003768 109.0
BYDH3_k127_9058792_0 TIGRFAM acetylornithine and succinylornithine K00821 - 2.6.1.11,2.6.1.17 6.608e-214 669.0
BYDH3_k127_9058792_1 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001816 489.0
BYDH3_k127_9058792_2 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 - 2.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004213 488.0
BYDH3_k127_9058792_3 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 GO:0003674,GO:0003824,GO:0003991,GO:0005488,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016597,GO:0016740,GO:0016772,GO:0016774,GO:0019752,GO:0031406,GO:0034618,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001101 479.0
BYDH3_k127_9058792_4 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 GO:0000050,GO:0000053,GO:0003674,GO:0003824,GO:0004055,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006575,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0019627,GO:0019752,GO:0034641,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:0072350,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 6.3.4.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001101 294.0
BYDH3_k127_9058792_5 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 - 3.4.25.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008686 272.0
BYDH3_k127_9058792_6 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001365 272.0
BYDH3_k127_9058792_7 Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC-XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids K03733,K04763 - - 0.00000000000000000000000000000000000001793 143.0
BYDH3_k127_9061258_0 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 1.29e-257 797.0
BYDH3_k127_9061258_1 Uncharacterised protein family (UPF0261) - - - 0.000000000000000000000006379 103.0
BYDH3_k127_908064_0 Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family K01486 - 3.5.4.2 3.06e-201 637.0
BYDH3_k127_908064_1 Cytochrome c bacterial - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003633 612.0
BYDH3_k127_9248712_0 ROK family K00845 - 2.7.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004151 425.0
BYDH3_k127_9248712_1 Protein of unknown function DUF72 - - - 0.00000000000000000000000000000000000000000000000000000000000000001331 231.0
BYDH3_k127_9248712_2 - - - - 0.00000000000000000001554 95.0
BYDH3_k127_9248712_3 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III K01840,K15778 - 5.4.2.2,5.4.2.8 0.0000000000002129 70.0
BYDH3_k127_9258723_0 Pfam:KaiC K08482 - - 2.668e-210 667.0
BYDH3_k127_9258723_1 Histidine kinase A domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002016 542.0
BYDH3_k127_9258723_2 PFAM Endonuclease Exonuclease phosphatase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003767 432.0
BYDH3_k127_9258723_3 KaiB K08481 - - 0.00000000000000000000000000000000000000000006915 162.0
BYDH3_k127_9258723_4 Glycine-zipper domain - - - 0.00000000000000000000000000000000000000000007899 172.0
BYDH3_k127_9258723_5 Universal stress protein family - - - 0.00000000000000000000000000000000000004754 147.0
BYDH3_k127_9258723_6 KaiB K08481 - - 0.00000000000000000000000000000000001184 139.0
BYDH3_k127_9258723_7 Belongs to the ompA family K03640 - - 0.0000000000000000000000000000000001854 145.0
BYDH3_k127_9258723_8 - - - - 0.000000000000009765 80.0
BYDH3_k127_9264566_0 SMART Elongator protein 3 MiaB NifB - - - 1.822e-278 860.0
BYDH3_k127_9264566_1 Belongs to the DegT DnrJ EryC1 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000346 590.0
BYDH3_k127_9264566_10 Thioesterase-like superfamily K07107 - - 0.0000000000000000000000000000000000000000000000000000000000000000006594 230.0
BYDH3_k127_9264566_11 PFAM Nitroreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000001335 235.0
BYDH3_k127_9264566_12 Transposase IS116 IS110 IS902 family - - - 0.00000000000000000000000000000000000000000000000003488 192.0
BYDH3_k127_9264566_13 ADP-heptose-lipopolysaccharide heptosyltransferase activity K02841,K02843 - - 0.00000000000000000000000000000000000000000118 169.0
BYDH3_k127_9264566_14 Hydrolase - - - 0.0000000000000000000000000000000000000001686 162.0
BYDH3_k127_9264566_15 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose - - - 0.000000000000000000000000000000000000004269 151.0
BYDH3_k127_9264566_17 Methionine biosynthesis protein MetW - - - 0.00000000000000000000000002296 113.0
BYDH3_k127_9264566_2 PFAM NAD dependent epimerase dehydratase family K01710 - 4.2.1.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003478 582.0
BYDH3_k127_9264566_3 Elongator protein 3, MiaB family, Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003655 527.0
BYDH3_k127_9264566_4 HEAT repeats - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003604 527.0
BYDH3_k127_9264566_5 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose K03272 GO:0000271,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0006629,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0008713,GO:0008920,GO:0009058,GO:0009059,GO:0009103,GO:0009244,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016301,GO:0016310,GO:0016740,GO:0016757,GO:0016772,GO:0019200,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0046401,GO:0046835,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 2.7.1.167,2.7.7.70 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007976 484.0
BYDH3_k127_9264566_6 Glycosyltransferase family 9 (heptosyltransferase) K02843 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004294 466.0
BYDH3_k127_9264566_7 Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001976 426.0
BYDH3_k127_9264566_8 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814 - 2.4.1.129 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003694 373.0
BYDH3_k127_9264566_9 PFAM glycosyl transferase family 9 K02843 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001653 271.0
BYDH3_k127_9283509_0 Belongs to the alpha-IPM synthase homocitrate synthase family K01649 - 2.3.3.13 1.578e-306 943.0
BYDH3_k127_9283509_1 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 4.665e-263 818.0
BYDH3_k127_9283509_2 Belongs to the aspartokinase family K00928 - 2.7.2.4 1.591e-221 691.0
BYDH3_k127_9283509_3 Bacterial extracellular solute-binding protein, family 7 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006444 458.0
BYDH3_k127_9283509_4 Bacterial extracellular solute-binding protein, family 7 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000094 418.0
BYDH3_k127_9283509_5 Belongs to the alpha-IPM synthase homocitrate synthase family K01649 - 2.3.3.13 0.0000000000000000000000000000000000000000000000000000000000000000000000002319 249.0
BYDH3_k127_9283509_6 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.00000000000000000000000000000000000001638 146.0
BYDH3_k127_9283509_7 PFAM Uncharacterised P-loop hydrolase UPF0079 K06925 GO:0008150,GO:0040007 - 0.00000000000000002589 87.0
BYDH3_k127_929431_0 Histidine kinase HAMP - - - 3.367e-238 743.0
BYDH3_k127_929431_1 Large family of predicted nucleotide-binding domains - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001327 602.0
BYDH3_k127_929431_2 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) K00991 GO:0003674,GO:0003824,GO:0016740,GO:0016772,GO:0016779,GO:0050518,GO:0070567 2.7.7.60 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007967 422.0
BYDH3_k127_929431_3 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885,K09698 - 6.1.1.17,6.1.1.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005815 374.0
BYDH3_k127_929431_4 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770,K12506 - 2.7.7.60,4.6.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000005593 256.0
BYDH3_k127_929431_5 sigma-54 factor interaction domain-containing protein K02667 - - 0.0000000000003643 71.0
BYDH3_k127_929431_6 CarD-like/TRCF domain K07736 - - 0.000000003884 57.0
BYDH3_k127_9337559_0 Belongs to the peptidase S1C family K04771 - 3.4.21.107 6.044e-252 784.0
BYDH3_k127_9337559_1 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K07644 - 2.7.13.3 1.987e-239 746.0
BYDH3_k127_9337559_2 Type II secretion system (T2SS), protein F K02653 - - 8.654e-194 610.0
BYDH3_k127_9337559_3 Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism K01012,K16180 - 2.8.1.6,5.4.99.58 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005322 538.0
BYDH3_k127_9337559_4 Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs K04094 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 2.1.1.74 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000398 468.0
BYDH3_k127_9337559_5 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001506 434.0
BYDH3_k127_9337559_6 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002008 415.0
BYDH3_k127_9337559_7 TPR repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001339 368.0
BYDH3_k127_9337559_8 response regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000002165 242.0
BYDH3_k127_9337559_9 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS - - - 0.00000000000003408 76.0
BYDH3_k127_9346357_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 0.0 1244.0
BYDH3_k127_9346357_1 PFAM MgsA AAA ATPase C terminal K07478 - - 8.787e-225 702.0
BYDH3_k127_9346357_10 membrane protein domain - - - 0.000001425 55.0
BYDH3_k127_9346357_11 4Fe-4S dicluster domain K00124 - - 0.00001435 50.0
BYDH3_k127_9346357_2 Aldehyde ferredoxin oxidoreductase, N-terminal domain K03738 - 1.2.7.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001688 562.0
BYDH3_k127_9346357_3 TIGRFAM DNA protecting protein DprA K04096 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000156 495.0
BYDH3_k127_9346357_4 nucleic acid binding K03698 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006214 439.0
BYDH3_k127_9346357_5 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001626 418.0
BYDH3_k127_9346357_6 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003414 411.0
BYDH3_k127_9346357_8 Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs K04094 - 2.1.1.74 0.00000000000000000000000000000000000000725 149.0
BYDH3_k127_9346357_9 Protein of unknown function (DUF933) K06942 - - 0.0000000009167 59.0
BYDH3_k127_9603352_0 sigma54 specific, transcriptional regulator, Fis family K02481 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001695 552.0
BYDH3_k127_9603352_1 Histidine kinase A domain protein K02030 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001439 360.0
BYDH3_k127_9603352_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005019 310.0
BYDH3_k127_9603352_3 - - - - 0.00000000000000000000000000000000003362 138.0
BYDH3_k127_9613716_0 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000006513 222.0
BYDH3_k127_9613716_1 ubiE/COQ5 methyltransferase family K07755 - 2.1.1.137 0.000000000000000000000000001968 112.0
BYDH3_k127_9644460_0 TIGRFAM ATPase, P-type (transporting), HAD superfamily, subfamily IC K01531 - 3.6.3.2 0.0 1098.0
BYDH3_k127_9644460_1 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K03307,K11928 - - 4.838e-285 881.0
BYDH3_k127_9644460_2 glycosyl transferase family 2 K21349 - 2.4.1.268 3.288e-217 678.0
BYDH3_k127_9644460_3 TIGRFAM leucyl-tRNA synthetase K01869 GO:0003674,GO:0003824,GO:0004812,GO:0004823,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006429,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.4 2.794e-210 657.0
BYDH3_k127_9644460_4 transmembrane transport - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000354 320.0
BYDH3_k127_9644460_5 translation release factor activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006454 277.0
BYDH3_k127_9644460_8 Removes the phosphate from trehalose 6-phosphate to produce free trehalose K00697,K01087,K16055 GO:0000287,GO:0003674,GO:0003824,GO:0004805,GO:0005488,GO:0005975,GO:0005984,GO:0005991,GO:0005992,GO:0006793,GO:0006796,GO:0006950,GO:0006970,GO:0008150,GO:0008152,GO:0009058,GO:0009266,GO:0009311,GO:0009312,GO:0009409,GO:0009628,GO:0009987,GO:0016051,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019203,GO:0033554,GO:0034637,GO:0042578,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044262,GO:0046351,GO:0046872,GO:0050896,GO:0051716,GO:0070413,GO:0070415,GO:0070417,GO:0071704,GO:1901576 2.4.1.15,2.4.1.347,3.1.3.12 0.0000000000000004412 79.0
BYDH3_k127_9644460_9 Binds directly to 16S ribosomal RNA K02968 - - 0.0000000000002782 72.0
BYDH3_k127_9698448_0 Enoyl-CoA hydratase/isomerase K07539 GO:0003674,GO:0003824,GO:0006139,GO:0006163,GO:0006195,GO:0006637,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009150,GO:0009154,GO:0009166,GO:0009259,GO:0009261,GO:0009987,GO:0016787,GO:0016822,GO:0016823,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0033865,GO:0033869,GO:0033875,GO:0034031,GO:0034032,GO:0034034,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0035383,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044273,GO:0044281,GO:0044283,GO:0046434,GO:0046483,GO:0046700,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1901787,GO:1901788 3.7.1.21 3.247e-235 729.0
BYDH3_k127_9698448_1 Creatinase/Prolidase N-terminal domain K01262 - 3.4.11.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002391 587.0
BYDH3_k127_9698448_2 Enoyl-CoA hydratase/isomerase K07537 - 4.2.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000338 445.0
BYDH3_k127_973675_0 type II secretion system protein E K02454 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001007 553.0
BYDH3_k127_973675_1 FtsX-like permease family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001361 419.0
BYDH3_k127_973675_10 Pfam:N_methyl_2 K02459 - - 0.000000285 60.0
BYDH3_k127_973675_11 Type II secretion system (T2SS), protein M subtype b - - - 0.000001971 57.0
BYDH3_k127_973675_12 - - - - 0.00006153 53.0
BYDH3_k127_973675_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003227 373.0
BYDH3_k127_973675_3 Type II secretion system (T2SS), protein F K02455 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008267 361.0
BYDH3_k127_973675_4 AAA domain, putative AbiEii toxin, Type IV TA system K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002637 325.0
BYDH3_k127_973675_5 Bacterial type II and III secretion system protein K02453,K03219 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003105 288.0
BYDH3_k127_973675_6 Type II secretion system (T2SS), protein K K02460 - - 0.00000000000000000000000000000000000000000000009855 181.0
BYDH3_k127_973675_7 fimbrial assembly K02461 - - 0.0000000004939 72.0
BYDH3_k127_973675_8 Prokaryotic N-terminal methylation motif - - - 0.000000007377 62.0
BYDH3_k127_973675_9 general secretion pathway protein K02457 - - 0.0000001598 59.0
BYDH3_k127_9788849_0 NAD binding K03778 - 1.1.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003017 589.0
BYDH3_k127_9788849_1 Aldo/keto reductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001158 478.0
BYDH3_k127_9788849_2 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) K09457 - 1.7.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000007656 241.0
BYDH3_k127_9788849_4 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.0000000000000000000000000007605 113.0
BYDH3_k127_9842216_0 succinate dehydrogenase or fumarate reductase, flavoprotein K00239,K00244 - 1.3.5.1,1.3.5.4 2.434e-316 974.0
BYDH3_k127_9842216_1 TIGRFAM succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 - 1.3.5.1,1.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007861 426.0
BYDH3_k127_9842216_2 Rieske [2Fe-2S] domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004266 276.0
BYDH3_k127_9842216_4 Cytochrome b(N-terminal)/b6/petB K00410,K00412,K02635,K02637 - - 0.00000000000000001191 85.0
BYDH3_k127_9993403_0 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002354 503.0
BYDH3_k127_9993403_1 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 GO:0002181,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001245 411.0
BYDH3_k127_9993403_10 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0008097,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000009117 209.0
BYDH3_k127_9993403_11 One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02895 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000001443 196.0
BYDH3_k127_9993403_12 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 0.0000000000000000000000000000000000000000000000000008553 184.0
BYDH3_k127_9993403_13 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015935,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042274,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.0000000000000000000000000000000000000000000002046 168.0
BYDH3_k127_9993403_14 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) K02907 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000212 114.0
BYDH3_k127_9993403_15 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000007396 104.0
BYDH3_k127_9993403_16 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 - - 0.000000000000000000000473 96.0
BYDH3_k127_9993403_17 Belongs to the universal ribosomal protein uL29 family K02904 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000492 93.0
BYDH3_k127_9993403_2 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001716 334.0
BYDH3_k127_9993403_3 Belongs to the universal ribosomal protein uS5 family K02988 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003799 315.0
BYDH3_k127_9993403_4 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000241 296.0
BYDH3_k127_9993403_5 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A K02876 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000877 252.0
BYDH3_k127_9993403_6 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000003449 236.0
BYDH3_k127_9993403_7 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0097159,GO:1901363,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000006808 228.0
BYDH3_k127_9993403_8 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000001119 220.0
BYDH3_k127_9993403_9 its binding is stimulated by other ribosomal proteins, e.g. L4, L17, and L20. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome (By similarity) K02890 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000001205 211.0