BYDH3_k127_10031200_0
The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
K03701
-
-
5.763e-225
718.0
View
BYDH3_k127_10031200_1
PFAM response regulator receiver
K07657
-
-
0.0000000000000000001969
99.0
View
BYDH3_k127_10031200_2
Histidine kinase
-
-
-
0.000000000000000001343
87.0
View
BYDH3_k127_10031200_3
histidine kinase A domain protein
-
-
-
0.000007225
49.0
View
BYDH3_k127_10070239_0
DegT/DnrJ/EryC1/StrS aminotransferase family
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001897
574.0
View
BYDH3_k127_10070239_1
Oxidoreductase family, NAD-binding Rossmann fold
-
-
-
0.0000000000000000000000000000000000000000000000000002155
198.0
View
BYDH3_k127_10070239_2
Cytidylyltransferase
K07257
-
-
0.0000000000000000000000000001959
118.0
View
BYDH3_k127_10216571_0
Belongs to the small heat shock protein (HSP20) family
K13993
-
-
0.00000004913
61.0
View
BYDH3_k127_10216571_1
self proteolysis
K09800,K11021,K13735
-
-
0.00003375
56.0
View
BYDH3_k127_10216571_2
antibiotic catabolic process
K01176,K01179,K13277
-
3.2.1.1,3.2.1.4
0.0009063
51.0
View
BYDH3_k127_10229664_0
amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
K01870
-
6.1.1.5
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002087
541.0
View
BYDH3_k127_10229664_1
Arginyl tRNA synthetase N terminal dom
K01887
-
6.1.1.19
0.00000000000008934
74.0
View
BYDH3_k127_10263602_0
Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
K03695
-
-
2.779e-266
838.0
View
BYDH3_k127_10263602_1
One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
K02519
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001862
347.0
View
BYDH3_k127_10263602_2
aromatic amino acid beta-eliminating lyase threonine aldolase
K04487
-
2.8.1.7
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001036
311.0
View
BYDH3_k127_10263602_3
Destroys radicals which are normally produced within the cells and which are toxic to biological systems
K04564
-
1.15.1.1
0.0000000000000000000000000000000000000000000000000000000000000000000000004839
250.0
View
BYDH3_k127_10263602_4
Protein of unknown function (DUF4446)
-
-
-
0.0000000000005399
74.0
View
BYDH3_k127_10263602_5
serine-type endopeptidase activity
K08669,K08784,K08786
GO:0000003,GO:0000785,GO:0001101,GO:0001890,GO:0002682,GO:0002683,GO:0002697,GO:0002698,GO:0002831,GO:0002832,GO:0003006,GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005615,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0005737,GO:0005739,GO:0005740,GO:0005758,GO:0005783,GO:0005789,GO:0005829,GO:0005856,GO:0005886,GO:0005887,GO:0006355,GO:0006357,GO:0006508,GO:0006807,GO:0006915,GO:0006950,GO:0006974,GO:0006979,GO:0006996,GO:0007005,GO:0007154,GO:0007165,GO:0007275,GO:0007276,GO:0007283,GO:0007399,GO:0007417,GO:0007420,GO:0007610,GO:0007626,GO:0007628,GO:0008150,GO:0008152,GO:0008219,GO:0008233,GO:0008236,GO:0008284,GO:0008344,GO:0008630,GO:0009056,GO:0009057,GO:0009266,GO:0009408,GO:0009628,GO:0009653,GO:0009887,GO:0009889,GO:0009892,GO:0009893,GO:0009894,GO:0009895,GO:0009898,GO:0009966,GO:0009967,GO:0009968,GO:0009987,GO:0010033,GO:0010467,GO:0010468,GO:0010506,GO:0010507,GO:0010556,GO:0010604,GO:0010623,GO:0010638,GO:0010639,GO:0010646,GO:0010647,GO:0010648,GO:0010821,GO:0010822,GO:0010823,GO:0010941,GO:0010942,GO:0010950,GO:0010952,GO:0012501,GO:0012505,GO:0016006,GO:0016020,GO:0016021,GO:0016043,GO:0016241,GO:0016242,GO:0016485,GO:0016540,GO:0016787,GO:0017015,GO:0017171,GO:0019219,GO:0019222,GO:0019538,GO:0019953,GO:0022008,GO:0022411,GO:0022414,GO:0022607,GO:0022617,GO:0023051,GO:0023052,GO:0023056,GO:0023057,GO:0030154,GO:0030162,GO:0030163,GO:0030182,GO:0030198,GO:0030510,GO:0030512,GO:0030514,GO:0030534,GO:0030900,GO:0031012,GO:0031224,GO:0031226,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031329,GO:0031330,GO:0031347,GO:0031348,GO:0031967,GO:0031970,GO:0031974,GO:0031975,GO:0031984,GO:0032101,GO:0032102,GO:0032268,GO:0032270,GO:0032501,GO:0032502,GO:0032504,GO:0032526,GO:0032991,GO:0033043,GO:0033554,GO:0033993,GO:0034097,GO:0034599,GO:0034605,GO:0035234,GO:0035456,GO:0035458,GO:0035556,GO:0035631,GO:0040008,GO:0040014,GO:0040036,GO:0042127,GO:0042175,GO:0042221,GO:0042475,GO:0042476,GO:0042802,GO:0042981,GO:0043062,GO:0043065,GO:0043066,GO:0043067,GO:0043068,GO:0043069,GO:0043085,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043235,GO:0043280,GO:0043281,GO:0043900,GO:0043901,GO:0043933,GO:0044085,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044421,GO:0044422,GO:0044424,GO:0044425,GO:0044427,GO:0044429,GO:0044432,GO:0044444,GO:0044446,GO:0044459,GO:0044464,GO:0044703,GO:0045786,GO:0045862,GO:0048232,GO:0048468,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048585,GO:0048608,GO:0048609,GO:0048638,GO:0048646,GO:0048666,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0050678,GO:0050679,GO:0050687,GO:0050688,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050896,GO:0051082,GO:0051128,GO:0051129,GO:0051130,GO:0051171,GO:0051173,GO:0051239,GO:0051246,GO:0051247,GO:0051252,GO:0051259,GO:0051260,GO:0051336,GO:0051345,GO:0051604,GO:0051704,GO:0051716,GO:0051726,GO:0052547,GO:0052548,GO:0060255,GO:0060322,GO:0060548,GO:0060717,GO:0060718,GO:0061458,GO:0065003,GO:0065007,GO:0065009,GO:0070011,GO:0070013,GO:0070206,GO:0070207,GO:0070848,GO:0070887,GO:0071229,GO:0071300,GO:0071310,GO:0071345,GO:0071363,GO:0071396,GO:0071704,GO:0071840,GO:0071944,GO:0080090,GO:0080134,GO:0080135,GO:0090092,GO:0090101,GO:0090287,GO:0090288,GO:0090659,GO:0097187,GO:0097190,GO:0097193,GO:0097194,GO:0098552,GO:0098562,GO:0098780,GO:0098796,GO:0098797,GO:0098802,GO:0098827,GO:0140096,GO:1900407,GO:1900408,GO:1901214,GO:1901215,GO:1901524,GO:1901525,GO:1901564,GO:1901565,GO:1901575,GO:1901700,GO:1901701,GO:1902175,GO:1902176,GO:1902494,GO:1902531,GO:1902532,GO:1902882,GO:1902883,GO:1903146,GO:1903147,GO:1903201,GO:1903202,GO:1903506,GO:1903844,GO:1903845,GO:1903867,GO:1904923,GO:1904924,GO:1905286,GO:1905368,GO:1905369,GO:1905370,GO:2000112,GO:2000116,GO:2001056,GO:2001141,GO:2001233,GO:2001234,GO:2001235,GO:2001236,GO:2001238,GO:2001239,GO:2001241,GO:2001242,GO:2001243,GO:2001267,GO:2001269
3.4.21.108
0.00002995
55.0
View
BYDH3_k127_10274594_0
Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
K01937
-
6.3.4.2
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001007
490.0
View
BYDH3_k127_10274594_1
TIGRFAM Cell division ATP-binding protein FtsE
K09812
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000007932
258.0
View
BYDH3_k127_10274594_10
lytic transglycosylase activity
K03194
-
-
0.000000008569
68.0
View
BYDH3_k127_10274594_2
Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
K02836
-
-
0.000000000000000000000000000000000000000000000000000000000000000000002113
246.0
View
BYDH3_k127_10274594_3
Antirepressor regulating drug resistance protein
K02172
-
-
0.00000000000000000000000000000000000000000000000002303
185.0
View
BYDH3_k127_10274594_4
Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
K04478,K05365,K05366,K21464
-
2.4.1.129,3.4.16.4
0.0000000000000000000000000000000000000000003587
180.0
View
BYDH3_k127_10274594_5
Part of the ABC transporter FtsEX involved in cellular division
K09811
-
-
0.00000000000000000000000000000001187
139.0
View
BYDH3_k127_10274594_6
PFAM TfoX N-terminal domain
K07343
-
-
0.0000000000000000000003438
100.0
View
BYDH3_k127_10274594_7
Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
K17828
-
1.3.1.14
0.00000000000000004906
91.0
View
BYDH3_k127_10274594_8
Belongs to the glycosyl hydrolase 57 family
K22451
GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464
2.4.1.25
0.0000000000000006281
90.0
View
BYDH3_k127_10274594_9
methyltransferase
K16868
-
2.1.1.265
0.0000000000003674
77.0
View
BYDH3_k127_10294292_0
Endoribonuclease that initiates mRNA decay
K18682
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004133
314.0
View
BYDH3_k127_10294292_1
Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
K03530
-
-
0.000000000000000000001971
97.0
View
BYDH3_k127_10387533_0
A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
K02469
-
5.99.1.3
0.000000000000000000000000000000000001314
144.0
View
BYDH3_k127_10387533_1
Bacterial extracellular solute-binding protein
K02027,K05813
-
-
0.00000000001606
76.0
View
BYDH3_k127_10387533_2
Met-10+ like-protein
-
-
-
0.0000000001149
70.0
View
BYDH3_k127_10387533_3
-
-
-
-
0.00001781
51.0
View
BYDH3_k127_10409294_0
Major Facilitator
K08153
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001944
304.0
View
BYDH3_k127_10409294_1
Protein of unknown function (DUF1653)
-
-
-
0.0000000000000000000000551
102.0
View
BYDH3_k127_10409294_2
Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
K03070
-
-
0.000000003827
59.0
View
BYDH3_k127_10409294_3
dCMP deaminase activity
K01493
-
3.5.4.12
0.0000006183
58.0
View
BYDH3_k127_10439567_0
Predicted membrane protein (DUF2238)
K08984
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000002627
276.0
View
BYDH3_k127_10439567_1
nucleoside 2-deoxyribosyltransferase
K08728
-
2.4.2.6
0.000000000000000000000000000000000000000000000000699
179.0
View
BYDH3_k127_10439567_2
Membrane
-
GO:0000003,GO:0000910,GO:0005575,GO:0005623,GO:0005886,GO:0007049,GO:0008150,GO:0009987,GO:0016020,GO:0019954,GO:0022402,GO:0022414,GO:0032505,GO:0043093,GO:0044464,GO:0051301,GO:0071944
-
0.0000000000000000000000000000000000000000000001748
175.0
View
BYDH3_k127_10439567_3
mechanosensitive ion channel activity
K03282
GO:0003674,GO:0005215,GO:0005216,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006884,GO:0008150,GO:0008361,GO:0008381,GO:0009987,GO:0009992,GO:0015075,GO:0015267,GO:0015318,GO:0016020,GO:0016021,GO:0016043,GO:0019725,GO:0022803,GO:0022836,GO:0022838,GO:0022857,GO:0030104,GO:0031224,GO:0031226,GO:0032535,GO:0034220,GO:0042592,GO:0042802,GO:0044425,GO:0044459,GO:0044464,GO:0048878,GO:0051179,GO:0051234,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0071840,GO:0071944,GO:0090066
-
0.0000000000000000000000000000000000000000002273
161.0
View
BYDH3_k127_10550195_0
Transketolase, pyrimidine binding domain
K00615
-
2.2.1.1
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008379
340.0
View
BYDH3_k127_10550195_1
Transketolase, thiamine diphosphate binding domain
K00615
-
2.2.1.1
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003089
314.0
View
BYDH3_k127_10550195_2
Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
K00134
-
1.2.1.12
0.000000000000000000000000000000000000000000000000000000000000000000000000000009952
269.0
View
BYDH3_k127_10550195_3
Ribose 5-phosphate isomerase
K01808
-
5.3.1.6
0.00000000000000000000000000000000000000000003231
165.0
View
BYDH3_k127_10550195_4
Belongs to the ribulose-phosphate 3-epimerase family
K01783
-
5.1.3.1
0.0000000000000000000000003044
114.0
View
BYDH3_k127_10550195_5
Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
K00134
-
1.2.1.12
0.000000000001275
68.0
View
BYDH3_k127_10593561_0
Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
K03798
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003193
592.0
View
BYDH3_k127_10593561_1
phosphorelay signal transduction system
-
-
-
0.00000000000000000000000000000000000000000000000000000000000001884
221.0
View
BYDH3_k127_10593561_2
Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
K03664
-
-
0.00000000000000000000000000000004617
130.0
View
BYDH3_k127_10658074_0
Type IV secretory pathway, VirB4
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007238
359.0
View
BYDH3_k127_10658074_1
-
-
-
-
0.000000000000693
77.0
View
BYDH3_k127_10660265_0
Fructose-bisphosphate aldolase, class II, Calvin cycle subtype
K01624
-
4.1.2.13
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002327
458.0
View
BYDH3_k127_10660265_1
Transport of potassium into the cell
K03549
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002771
475.0
View
BYDH3_k127_10660265_2
HD superfamily hydrolase
K06950
-
-
0.000000000000000000000000000000007148
128.0
View
BYDH3_k127_106814_0
Belongs to the class-I aminoacyl-tRNA synthetase family
K01869
-
6.1.1.4
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001248
485.0
View
BYDH3_k127_106814_1
Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
K00566
GO:0002097,GO:0002098,GO:0002143,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0034227,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360
2.8.1.13
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001989
323.0
View
BYDH3_k127_106814_2
Belongs to the MurCDEF family
K01924
-
6.3.2.8
0.000000000000000000000000000000000000000000000000000000000000000000000000000000012
285.0
View
BYDH3_k127_106814_3
PFAM ATP cone domain
-
-
-
0.00000000000000000000000000000000000000000000000001737
184.0
View
BYDH3_k127_106814_4
Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
K07082
-
-
0.00000000000000000000000000000000000000000000001842
183.0
View
BYDH3_k127_106814_5
PFAM FKBP-type peptidyl-prolyl cis-trans isomerase
K01802,K03772
-
5.2.1.8
0.0000000000000000000000000000000000001721
146.0
View
BYDH3_k127_106814_6
PFAM Exonuclease RNase T and DNA polymerase III
K02342
-
2.7.7.7
0.00000000000000000000000642
108.0
View
BYDH3_k127_106814_7
Sigma-70 factor, region 1.2
-
-
-
0.00000195
59.0
View
BYDH3_k127_10749296_0
TIGRFAM ATPase, P-type (transporting), HAD superfamily, subfamily IC
K01533,K17686
-
3.6.3.4,3.6.3.54
1.554e-203
655.0
View
BYDH3_k127_10749296_1
Pirin
K06911
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004089
302.0
View
BYDH3_k127_10749296_2
Alternative oxidase
K17893
-
1.10.3.11
0.000000000000000000000000000000000000000000000000000000000000000000000000000004281
268.0
View
BYDH3_k127_10749296_3
Heavy metal transport detoxification protein
-
-
-
0.000000000000000000000000000000009756
140.0
View
BYDH3_k127_10749296_4
-
-
-
-
0.0000000000000001189
89.0
View
BYDH3_k127_10749296_5
Metal-sensitive transcriptional repressor
K21600
-
-
0.0000000000000001804
82.0
View
BYDH3_k127_10749296_6
Cytochrome C biogenesis protein transmembrane region
-
-
-
0.00000000000249
72.0
View
BYDH3_k127_10749296_7
SNARE associated Golgi protein
-
-
-
0.00000000436
65.0
View
BYDH3_k127_10749296_8
TIGRFAM ATPase, P-type (transporting), HAD superfamily, subfamily IC
K01533,K17686
-
3.6.3.4,3.6.3.54
0.000002465
49.0
View
BYDH3_k127_10749296_9
-
-
-
-
0.0005671
49.0
View
BYDH3_k127_10799452_0
ABC1 family
K03688
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008824
424.0
View
BYDH3_k127_10799452_1
Flavin containing amine oxidoreductase
K10027
-
1.3.99.26,1.3.99.28,1.3.99.29,1.3.99.31
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000149
361.0
View
BYDH3_k127_10799452_2
Domain of unknown function (DUF333)
K09712
-
-
0.00000000003312
70.0
View
BYDH3_k127_10935692_0
Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
K03655
-
3.6.4.12
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001002
471.0
View
BYDH3_k127_10935692_1
PFAM fatty acid desaturase
K00507
-
1.14.19.1
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004152
355.0
View
BYDH3_k127_10935692_2
Domain of unknown function (DUF4105)
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000005367
237.0
View
BYDH3_k127_10935692_3
dUTP diphosphatase activity
K01520,K13038
GO:0000287,GO:0003674,GO:0003824,GO:0004170,GO:0005488,GO:0006139,GO:0006220,GO:0006221,GO:0006226,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009141,GO:0009143,GO:0009147,GO:0009149,GO:0009157,GO:0009162,GO:0009165,GO:0009166,GO:0009176,GO:0009177,GO:0009200,GO:0009204,GO:0009211,GO:0009213,GO:0009219,GO:0009221,GO:0009223,GO:0009262,GO:0009263,GO:0009264,GO:0009265,GO:0009394,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0022607,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0043167,GO:0043169,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046078,GO:0046080,GO:0046081,GO:0046385,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0046872,GO:0047429,GO:0051259,GO:0051260,GO:0055086,GO:0065003,GO:0070206,GO:0070207,GO:0071704,GO:0071840,GO:0072527,GO:0072528,GO:0072529,GO:0090407,GO:1901135,GO:1901136,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576
3.6.1.23,4.1.1.36,6.3.2.5
0.000000000000000000000000000000000000001141
151.0
View
BYDH3_k127_10935692_4
Clp protease
K01358
-
3.4.21.92
0.0000008391
57.0
View
BYDH3_k127_10976376_0
Belongs to the Orn Lys Arg decarboxylase class-II family
K01581
-
4.1.1.17
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004946
511.0
View
BYDH3_k127_10976376_1
-
-
-
-
0.00000000000000000000000001802
115.0
View
BYDH3_k127_11028865_0
cysteine-tRNA ligase activity
K01883
GO:0000166,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576
6.1.1.16
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001959
424.0
View
BYDH3_k127_11028865_1
Belongs to the peptidase S41A family
K03797
-
3.4.21.102
0.0000000000000000000000000000000000000000000000000000000000000000000001345
256.0
View
BYDH3_k127_11028865_2
Mediates influx of magnesium ions
K03284
-
-
0.000000000000000000000000002316
123.0
View
BYDH3_k127_11028865_3
Binds to the 23S rRNA
K02939
-
-
0.000000000000000001912
91.0
View
BYDH3_k127_11060277_0
TIGRFAM SUF system FeS cluster assembly, SufB
K07033,K09014
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006812
553.0
View
BYDH3_k127_11060277_1
Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
K11717
-
2.8.1.7,4.4.1.16
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003336
384.0
View
BYDH3_k127_11060277_2
FeS assembly ATPase SufC
K09013
-
-
0.0000000000000000000000000000000000000000000000000000000000000000002854
237.0
View
BYDH3_k127_11060277_3
COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component
K09015
-
-
0.00000000000000000000000000001022
132.0
View
BYDH3_k127_11060277_4
SUF system FeS assembly protein, NifU family
K04488
-
-
0.0000000000000000000000003463
109.0
View
BYDH3_k127_11060277_5
Iron-sulfur cluster assembly protein
-
-
-
0.0000000000000001001
83.0
View
BYDH3_k127_11060277_6
DNA-binding protein VF530
-
GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0005488,GO:0097159,GO:1901363
-
0.000000000002084
67.0
View
BYDH3_k127_11060277_7
AAA domain
K07028
-
-
0.000007893
57.0
View
BYDH3_k127_11060277_8
COG1651 Protein-disulfide isomerase
-
-
-
0.00001005
49.0
View
BYDH3_k127_11098405_0
Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
K01689
-
4.2.1.11
0.000000000000000000000000000000000000000000000006666
173.0
View
BYDH3_k127_11098405_1
Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
K01579
-
4.1.1.11
0.0000000000000000000000000000000000000000000959
162.0
View
BYDH3_k127_11098405_2
Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
K01834
GO:0003674,GO:0003824,GO:0004619,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006109,GO:0006139,GO:0006140,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009894,GO:0009987,GO:0010675,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016866,GO:0016868,GO:0017144,GO:0018130,GO:0019219,GO:0019220,GO:0019222,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0031323,GO:0031329,GO:0032787,GO:0034248,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0043455,GO:0043456,GO:0043470,GO:0043471,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046538,GO:0046700,GO:0046939,GO:0050789,GO:0050794,GO:0051171,GO:0051174,GO:0051186,GO:0051188,GO:0051193,GO:0051196,GO:0055086,GO:0060255,GO:0062012,GO:0065007,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0080090,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1902031
5.4.2.11
0.000000000000000000000000000000000000000002894
163.0
View
BYDH3_k127_11098405_3
Protein of unknown function (DUF1003)
-
-
-
0.000000000000000000000000000002293
127.0
View
BYDH3_k127_11199982_0
Pyruvate formate lyase-like
K00656
-
2.3.1.54
8.806e-290
909.0
View
BYDH3_k127_11199982_1
Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
K02355
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005833
437.0
View
BYDH3_k127_11199982_2
Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
K04069
-
1.97.1.4
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002282
286.0
View
BYDH3_k127_11199982_3
Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
K02950
-
-
0.000000000000000000000000000000000000000000000000000001871
194.0
View
BYDH3_k127_11199982_4
One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
K02992
GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904
-
0.00000000000000000000000000000000000000000000001329
175.0
View
BYDH3_k127_11199982_5
PFAM peptidase M50
-
-
-
0.0000000000000000000000000000000000000004107
157.0
View
BYDH3_k127_11199982_6
AAA domain
K00859
-
2.7.1.24
0.000000002774
66.0
View
BYDH3_k127_11199982_7
Patatin-like phospholipase
-
-
-
0.0005679
45.0
View
BYDH3_k127_11237171_0
Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
K01875
-
6.1.1.11
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009192
409.0
View
BYDH3_k127_11237171_1
TIGRFAM DNA protecting protein DprA
K04096
-
-
0.0000000000000000000000000000003764
127.0
View
BYDH3_k127_11674285_0
Radical_SAM C-terminal domain
K07739
-
2.3.1.48
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001672
372.0
View
BYDH3_k127_11674285_1
phosphotransferase activity, for other substituted phosphate groups
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000105
301.0
View
BYDH3_k127_11674285_2
Belongs to the UDP-glucose GDP-mannose dehydrogenase family
K00012
-
1.1.1.22
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001022
283.0
View
BYDH3_k127_11674285_3
transferase activity, transferring glycosyl groups
-
-
-
0.000000000000000000000000000000000000000000000000000000002229
214.0
View
BYDH3_k127_11674285_4
COG0500 SAM-dependent methyltransferases
-
-
-
0.00000000000000000000004184
108.0
View
BYDH3_k127_11674285_5
Glycosyl transferases group 1
-
-
-
0.00000000000000000000122
108.0
View
BYDH3_k127_11674285_6
phosphatase activity
K01560,K07025,K20866,K21063
GO:0003674,GO:0003824,GO:0006766,GO:0006767,GO:0006771,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042578,GO:0042726,GO:0042727,GO:0043726,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576
3.1.3.10,3.1.3.104,3.8.1.2
0.000000000000002344
84.0
View
BYDH3_k127_11674285_7
Sigma-70, region 4
K03088
-
-
0.0000008881
55.0
View
BYDH3_k127_11706725_0
cytochrome c biogenesis protein
K06196
-
-
0.0000000000000000000000000000000000000000002811
167.0
View
BYDH3_k127_11706725_1
Transglycosylase SLT domain
-
-
-
0.000000000000000000002201
103.0
View
BYDH3_k127_11736931_0
Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
K02935
-
-
0.000000000000000000000000000000004217
132.0
View
BYDH3_k127_11736931_2
Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
K02864
GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904
-
0.0000000000000000000000005077
110.0
View
BYDH3_k127_11736931_3
PFAM Conserved TM helix repeat-containing protein
-
-
-
0.0000000000000000000004032
104.0
View
BYDH3_k127_11736931_4
Transcriptional regulator
-
-
-
0.000002712
57.0
View
BYDH3_k127_11736931_5
TIGRFAM RHS repeat-associated core domain
-
-
-
0.0005035
54.0
View
BYDH3_k127_11769908_0
Efflux ABC transporter, permease protein
K02004
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002049
423.0
View
BYDH3_k127_11769908_1
Reductase C-terminal
-
-
-
0.0000000000000000000000000000000000000000000000000000000000006909
226.0
View
BYDH3_k127_11769908_2
TIGRFAM acetyl coenzyme A synthetase (ADP forming), alpha domain
K01905,K22224
-
6.2.1.13
0.000000000000000000000000000000000000000000000006335
182.0
View
BYDH3_k127_11769908_3
Pyridine nucleotide-disulphide oxidoreductase
-
-
-
0.00000000000000000000005533
107.0
View
BYDH3_k127_11769908_4
NifU-like domain
-
-
-
0.000000000002695
69.0
View
BYDH3_k127_11769908_5
Divergent 4Fe-4S mono-cluster
K05337
-
-
0.000006201
51.0
View
BYDH3_k127_11792316_0
3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
K12573,K12585
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000528
615.0
View
BYDH3_k127_11792316_1
Bacterial PH domain
-
-
-
0.000004297
57.0
View
BYDH3_k127_11809495_0
-
-
-
-
0.00000000000000000000000000000000000000002387
169.0
View
BYDH3_k127_11809495_1
Belongs to the small heat shock protein (HSP20) family
-
-
-
0.00000000000000000003935
95.0
View
BYDH3_k127_11809495_2
Carbohydrate-binding protein of the ER
-
-
-
0.000000000000743
79.0
View
BYDH3_k127_11809495_3
Belongs to the cytochrome b5 family
-
-
-
0.000000000001109
73.0
View
BYDH3_k127_11809495_4
chitinase
K01183
-
3.2.1.14
0.000000000003082
78.0
View
BYDH3_k127_11809495_5
ribosomal large subunit export from nucleus
-
-
-
0.000001824
57.0
View
BYDH3_k127_11809495_6
Lamin Tail Domain
-
-
-
0.00000232
59.0
View
BYDH3_k127_11904660_0
Belongs to the class-II aminoacyl-tRNA synthetase family
K04567,K04568
-
6.1.1.6
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009667
488.0
View
BYDH3_k127_11904660_1
Penicillin-binding Protein dimerisation domain
K03587,K08384
GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0008144,GO:0008150,GO:0008658,GO:0008955,GO:0009987,GO:0016020,GO:0016021,GO:0016740,GO:0016757,GO:0016758,GO:0031224,GO:0031226,GO:0031406,GO:0032153,GO:0033218,GO:0033293,GO:0036094,GO:0042221,GO:0042493,GO:0043167,GO:0043168,GO:0043177,GO:0044425,GO:0044459,GO:0044464,GO:0050896,GO:0051301,GO:0071944,GO:0097159,GO:1901363,GO:1901681
3.4.16.4
0.000000000000000000000000000000000000000000000000000000000000000000000000000000001407
293.0
View
BYDH3_k127_11904660_2
Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
K03438
GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0070475,GO:0071424,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360
2.1.1.199
0.0000000000000000000000000000000000000000000000000000000000000000000000001614
257.0
View
BYDH3_k127_11904660_3
Penicillin-binding protein 2
K05515
-
3.4.16.4
0.000000000000000000000000000000000000000000000000000000003097
214.0
View
BYDH3_k127_11904660_4
Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
K01929
-
6.3.2.10
0.00000000000000000000000000000000000000000000000000001917
205.0
View
BYDH3_k127_11904660_5
Belongs to the MraZ family
K03925
-
-
0.0000000000000000000000000000000000005207
144.0
View
BYDH3_k127_11904660_6
Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
K03624
-
-
0.0000000000000000000000008588
111.0
View
BYDH3_k127_12603871_0
A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
K02470
-
5.99.1.3
1.576e-200
645.0
View
BYDH3_k127_12646322_0
Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
K02112
-
3.6.3.14
4.426e-199
629.0
View
BYDH3_k127_12646322_1
Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
K02111
-
3.6.3.14
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007714
586.0
View
BYDH3_k127_12646322_10
Diguanylate cyclase
-
-
-
0.00005235
51.0
View
BYDH3_k127_12646322_2
ATPase related to phosphate starvation-inducible protein PhoH
K07175
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001374
400.0
View
BYDH3_k127_12646322_3
Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
K02115
-
-
0.00000000000000000000000000000000000000000000000000000005896
207.0
View
BYDH3_k127_12646322_4
Cysteine-rich secretory protein family
-
-
-
0.00000000000000000001621
104.0
View
BYDH3_k127_12646322_5
Thrombospondin type 3 repeat
-
-
-
0.0000000000000001054
96.0
View
BYDH3_k127_12646322_6
Protein of unknown function (DUF642)
-
-
-
0.0000000000004056
84.0
View
BYDH3_k127_12646322_7
Produces ATP from ADP in the presence of a proton gradient across the membrane
K02113,K02114
GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016469,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0032991,GO:0033178,GO:0034220,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0045259,GO:0045261,GO:0046034,GO:0046390,GO:0046483,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600
-
0.000000000002695
69.0
View
BYDH3_k127_12646322_8
Protein of unknown function (DUF805)
-
-
-
0.0000000001096
69.0
View
BYDH3_k127_12646322_9
Protein of unknown function (DUF805)
-
-
-
0.00002828
52.0
View
BYDH3_k127_12763318_0
Methyltransferase domain
-
-
-
0.0000000000000000000000000009375
123.0
View
BYDH3_k127_12763318_1
ErfK YbiS YcfS YnhG family protein
-
-
-
0.000000000000000000000001254
114.0
View
BYDH3_k127_12763318_2
TIGRFAM RNA polymerase sigma factor RpoS
K03087
-
-
0.00000000000000006549
89.0
View
BYDH3_k127_12763318_3
-
-
-
-
0.00000000004058
72.0
View
BYDH3_k127_12763318_4
Transporter
K03453
-
-
0.0000000005443
70.0
View
BYDH3_k127_12784032_0
Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
K04077
GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001434
578.0
View
BYDH3_k127_12784032_1
Bacterial extracellular solute-binding proteins, family 5 Middle
K02035
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000561
280.0
View
BYDH3_k127_12784032_2
An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
K12574
-
-
0.000000000000000000000000000007001
129.0
View
BYDH3_k127_12784032_3
Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
K04078
-
-
0.00000000000001166
78.0
View
BYDH3_k127_12784032_4
Preprotein translocase SecG subunit
K03075
GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006616,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0022857,GO:0022884,GO:0031522,GO:0032978,GO:0032991,GO:0033036,GO:0033365,GO:0034613,GO:0042886,GO:0042887,GO:0043952,GO:0044464,GO:0045047,GO:0045184,GO:0046907,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0061024,GO:0065002,GO:0070727,GO:0070972,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0071944,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:1904680
-
0.000000126
56.0
View
BYDH3_k127_12834799_0
Metallo-beta-lactamase superfamily
K12574
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003035
359.0
View
BYDH3_k127_12834799_1
Belongs to the arginase family
K01476,K01480,K12255,K18459
-
3.5.3.1,3.5.3.11,3.5.3.17,3.5.3.7
0.0000000000000000000000000189
116.0
View
BYDH3_k127_12900609_0
RmlD substrate binding domain
K01784,K02473,K03274,K08678
-
4.1.1.35,5.1.3.2,5.1.3.20,5.1.3.7
0.000000000000000000000000000000000000000000000000000000000000000000000000002062
265.0
View
BYDH3_k127_12900609_1
Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
K02356
-
-
0.000000000000000000000000000001192
127.0
View
BYDH3_k127_12900609_2
Sigma-70, region 4
-
-
-
0.0000000000001692
78.0
View
BYDH3_k127_1482947_0
PFAM type II secretion system protein E
K02454,K02652
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002951
434.0
View
BYDH3_k127_1482947_1
Participates in both transcription termination and antitermination
K02600
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005922
329.0
View
BYDH3_k127_1482947_2
Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
K01358
GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005515,GO:0006355,GO:0006508,GO:0006515,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019219,GO:0019222,GO:0019538,GO:0030163,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0042623,GO:0042802,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051603,GO:0060255,GO:0065007,GO:0070011,GO:0071704,GO:0080090,GO:0140096,GO:1901564,GO:1901565,GO:1901575,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141
3.4.21.92
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002006
283.0
View
BYDH3_k127_1482947_3
Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
K01507
-
3.6.1.1
0.000000000000000000000000000000000000000000000000000000000002013
213.0
View
BYDH3_k127_1482947_4
Peptidase C26
K07010
-
-
0.0000000000000000000000000000000000000000000000006152
183.0
View
BYDH3_k127_1482947_5
Endoribonuclease that initiates mRNA decay
K18682
GO:0003674,GO:0005488,GO:0005515,GO:0042802
-
0.0000000000000000000000000000000000000000123
163.0
View
BYDH3_k127_1482947_6
permease
K02004
-
-
0.00000000000000000000000000000001065
136.0
View
BYDH3_k127_1482947_7
Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
K03545
GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464
-
0.0000000000000000000000003382
118.0
View
BYDH3_k127_1482947_8
Domain of unknown function (DUF4430)
-
-
-
0.0000002191
61.0
View
BYDH3_k127_1482947_9
Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides
K05685
-
-
0.0008767
48.0
View
BYDH3_k127_1483275_0
pyruvate flavodoxin ferredoxin oxidoreductase domain protein
K00174
-
1.2.7.11,1.2.7.3
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001614
319.0
View
BYDH3_k127_1483275_1
Nickel-dependent hydrogenase
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000001205
258.0
View
BYDH3_k127_1483275_2
Belongs to the NiCoT transporter (TC 2.A.52) family
K07241
-
-
0.0000000000000000000000000000000000000000000000000000000000000000002175
242.0
View
BYDH3_k127_1483275_3
Ferric reductase domain protein
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000391
234.0
View
BYDH3_k127_1483275_4
-
-
-
-
0.00000000000000000000000000000000000000000000000000000003512
206.0
View
BYDH3_k127_1483275_5
EamA-like transporter family
-
-
-
0.00000000000000000000000000000000000000003077
167.0
View
BYDH3_k127_1483275_6
PFAM NADH ubiquinone oxidoreductase 20 kDa subunit
-
-
-
0.00000000000000000003778
96.0
View
BYDH3_k127_1483275_7
hydrogenase expression formation protein
K04653,K04656
-
-
0.000000000002146
70.0
View
BYDH3_k127_1483275_8
Domain of unknown function (DUF4377)
-
-
-
0.00005627
51.0
View
BYDH3_k127_1543950_0
Parallel beta-helix repeats
-
-
-
0.0001283
55.0
View
BYDH3_k127_1556357_0
5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C)
K05967
-
-
0.00003804
53.0
View
BYDH3_k127_1561665_0
Peptidase family M3
K01414
-
3.4.24.70
0.00000000000000000000000000000000000000000000000000000004569
206.0
View
BYDH3_k127_1561665_1
AI-2E family transporter
-
-
-
0.000000000000000000000000000000000000000000000007132
185.0
View
BYDH3_k127_1561665_2
Protein of unknown function (DUF3999)
-
-
-
0.000000000000004893
88.0
View
BYDH3_k127_1645552_0
PFAM secretion protein HlyD family protein
K02005
-
-
0.00000000000000002062
96.0
View
BYDH3_k127_1645552_1
Uroporphyrinogen decarboxylase (URO-D)
-
-
-
0.0000000000000001973
80.0
View
BYDH3_k127_1851231_0
Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate
K00940
GO:0003674,GO:0003824,GO:0004550,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006165,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009132,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0019205,GO:0019637,GO:0034641,GO:0044237,GO:0044238,GO:0044281,GO:0044464,GO:0046483,GO:0046939,GO:0055086,GO:0071704,GO:1901360
2.7.4.6
0.00000000000000000000000000000000000000000000006819
176.0
View
BYDH3_k127_1971557_0
Male sterility protein
K17716
-
5.1.3.2
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009792
359.0
View
BYDH3_k127_1971557_1
Acetyltransferase (GNAT) domain
-
-
-
0.0000000000000000000000000000000000000000000000002418
181.0
View
BYDH3_k127_1971557_2
PFAM glycosyl transferase family 9
-
-
-
0.00007574
48.0
View
BYDH3_k127_205950_0
Belongs to the class-I aminoacyl-tRNA synthetase family
K01869
-
6.1.1.4
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002191
592.0
View
BYDH3_k127_205950_1
ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
K06942
GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0044424,GO:0044464
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002757
413.0
View
BYDH3_k127_2139024_0
Belongs to the pyruvate kinase family
K00873
-
2.7.1.40
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001773
421.0
View
BYDH3_k127_2139024_1
SET domain
K07117
-
-
0.00000000000000000000000000000000000000159
152.0
View
BYDH3_k127_2139024_2
Protein of unknown function (DUF3298)
-
-
-
0.00000000000002378
83.0
View
BYDH3_k127_2139024_3
Lysin motif
-
-
-
0.000000008777
66.0
View
BYDH3_k127_2325462_0
Catalyzes the reversible phosphorylation of UMP to UDP
K09903
GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006213,GO:0006220,GO:0006221,GO:0006225,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009163,GO:0009165,GO:0009185,GO:0009188,GO:0009193,GO:0009194,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019693,GO:0033862,GO:0034404,GO:0034641,GO:0034654,GO:0040007,GO:0042455,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044464,GO:0046048,GO:0046131,GO:0046132,GO:0046134,GO:0046390,GO:0046483,GO:0046872,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0071944,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659
2.7.4.22
0.00000000000000000000000000000000000000000000000000000000001218
214.0
View
BYDH3_k127_2325462_1
Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
-
-
-
0.0000000000000000000000000000000000000000000000000000000003235
207.0
View
BYDH3_k127_2325462_2
CBS domain
-
-
-
0.00000000000000000000000000000001399
136.0
View
BYDH3_k127_2325462_3
Belongs to the SUA5 family
K07566
-
2.7.7.87
0.00000000000000000000000000000001639
133.0
View
BYDH3_k127_2368628_0
UvrD-like helicase C-terminal domain
K03657
-
3.6.4.12
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002385
326.0
View
BYDH3_k127_2368628_1
Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
K02528
-
2.1.1.182
0.000000000000000000000000000000000000000000000000000001577
201.0
View
BYDH3_k127_2368628_2
IPT/TIG domain
-
-
-
0.00005781
55.0
View
BYDH3_k127_2368628_3
Belongs to the peptidase S8 family
-
-
-
0.0004102
52.0
View
BYDH3_k127_2550034_0
Peptidoglycan polymerase that is essential for cell wall elongation
K05837
-
-
0.00000000000000000000000000000000000000000000000000000000000000001499
237.0
View
BYDH3_k127_2550034_1
Repeats in polycystic kidney disease 1 (PKD1) and other proteins
-
-
-
0.00000000000004945
85.0
View
BYDH3_k127_2550034_2
Carbon-nitrogen hydrolase
K03820
-
-
0.000000001609
68.0
View
BYDH3_k127_2782386_0
Histidine kinase
-
-
-
0.0000000000000000000000000000000000000003506
165.0
View
BYDH3_k127_2782386_1
HD domain
K07023
-
-
0.000000000000000000000000000002503
126.0
View
BYDH3_k127_2782386_2
Recycling of diacylglycerol produced during the turnover of membrane phospholipid
K00901
-
2.7.1.107
0.000000000000000562
82.0
View
BYDH3_k127_2875150_0
ATPase, P-type (transporting), HAD superfamily, subfamily IC
K01537
-
3.6.3.8
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003281
499.0
View
BYDH3_k127_2875150_1
RmuC family
K09760
-
-
0.000000000000000000000000000006114
128.0
View
BYDH3_k127_2875150_2
Yqey-like protein
K09117
-
-
0.0000000000000000000000001375
112.0
View
BYDH3_k127_2875150_3
Diguanylate cyclase phosphodiesterase with PAS PAC sensor(S)
-
-
-
0.00000000000000000003279
100.0
View
BYDH3_k127_2875150_4
-
-
-
-
0.000000001837
65.0
View
BYDH3_k127_2892340_0
Belongs to the D-alanine--D-alanine ligase family
K01921
-
6.3.2.4
0.0000000000000000000000000000000000000000000000000000000000000355
226.0
View
BYDH3_k127_2892340_1
-
-
-
-
0.000000000000000000000000000000006303
139.0
View
BYDH3_k127_2892340_2
protein secretion by the type IV secretion system
K00564,K02026,K10716,K11070,K13924,K14393
-
2.1.1.172,2.1.1.80,3.1.1.61
0.00000000000006306
76.0
View
BYDH3_k127_2892340_3
The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
K03703
-
-
0.000002137
51.0
View
BYDH3_k127_2933239_0
An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
K03979
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000003494
275.0
View
BYDH3_k127_2933239_1
Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
K01876,K02434
GO:0003674,GO:0003824,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016879,GO:0016884,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0050567,GO:0070681,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564
6.1.1.12,6.3.5.6,6.3.5.7
0.00000000000000000000000000000000000000000000000000000000000002993
219.0
View
BYDH3_k127_2933239_2
alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
K03564
-
1.11.1.15
0.00000000000000000000000000000000000000000000000005197
182.0
View
BYDH3_k127_3007_0
self proteolysis
K09800,K11021,K13735
-
-
0.00001742
57.0
View
BYDH3_k127_3007_1
Involved in the tonB-independent uptake of proteins
-
-
-
0.00002812
57.0
View
BYDH3_k127_3077809_0
Metallo-peptidase family M12B Reprolysin-like
-
-
-
0.0000000000003515
84.0
View
BYDH3_k127_3077809_1
Efflux ABC transporter, permease protein
K02004
-
-
0.00001559
57.0
View
BYDH3_k127_3151018_0
COG2244 Membrane protein involved in the export of O-antigen and teichoic acid
-
-
-
0.00000000000000000000000000000000001114
153.0
View
BYDH3_k127_3151018_1
capsule polysaccharide
-
-
-
0.0000000000000000000000000000001702
132.0
View
BYDH3_k127_3201177_0
Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
K02982
GO:0002181,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0019538,GO:0022626,GO:0022627,GO:0030312,GO:0032991,GO:0034641,GO:0034645,GO:0040007,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990904
-
0.00000000000000000000000000000000000000000000000000003016
195.0
View
BYDH3_k127_3201177_1
-
-
-
-
0.00000000000000000000000000000000000000000000000282
181.0
View
BYDH3_k127_3201177_2
Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
K02874
GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904
-
0.0000000000000000000000000000000000000001895
153.0
View
BYDH3_k127_3201177_3
Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
K02878
-
-
0.000000000000000000000000000000000000002577
150.0
View
BYDH3_k127_3201177_4
its binding is stimulated by other ribosomal proteins, e.g. L4, L17, and L20. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome (By similarity)
K02890
GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904
-
0.0000000000000000000000008212
109.0
View
BYDH3_k127_3201177_5
Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
K02965
GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015935,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042274,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904
-
0.000000000000000000000003345
106.0
View
BYDH3_k127_3201177_6
Cytochrome c7 and related cytochrome c
-
-
-
0.000000000000000000009533
97.0
View
BYDH3_k127_3201177_7
One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
K02961
-
-
0.000000000000000003183
87.0
View
BYDH3_k127_3201177_8
One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
K02895
-
-
0.0000000000000001179
81.0
View
BYDH3_k127_3201177_9
Belongs to the universal ribosomal protein uL29 family
K02904
-
-
0.0004226
45.0
View
BYDH3_k127_3261202_0
Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology
K13317
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001433
379.0
View
BYDH3_k127_3261202_1
Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
K00604
-
2.1.2.9
0.0000000000000000000000000000000000000005535
158.0
View
BYDH3_k127_3261202_2
PFAM Glycosyl transferases group 1
-
-
-
0.0000000000000002576
91.0
View
BYDH3_k127_3323498_0
ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002894
441.0
View
BYDH3_k127_3323498_1
ATPase (AAA
K07478
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004535
373.0
View
BYDH3_k127_3323498_10
Zincin-like metallopeptidase
-
-
-
0.000000000000000000000002205
106.0
View
BYDH3_k127_3323498_11
P-type ATPase
K01533,K01534,K17686
-
3.6.3.3,3.6.3.4,3.6.3.5,3.6.3.54
0.000000000000000000000832
98.0
View
BYDH3_k127_3323498_12
Ferric uptake regulator family
K02076,K03711
-
-
0.00000000000000244
81.0
View
BYDH3_k127_3323498_13
cation diffusion facilitator family transporter
K16264
-
-
0.000000000007852
74.0
View
BYDH3_k127_3323498_14
-
-
-
-
0.0000002808
61.0
View
BYDH3_k127_3323498_2
Protein of unknown function (DUF475)
K09799
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004609
370.0
View
BYDH3_k127_3323498_3
Flavoprotein
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008484
361.0
View
BYDH3_k127_3323498_4
Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
K00975
-
2.7.7.27
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001593
311.0
View
BYDH3_k127_3323498_5
E1-E2 ATPase
K01534
-
3.6.3.3,3.6.3.5
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004319
303.0
View
BYDH3_k127_3323498_6
Immunoglobulin-like domain of bacterial spore germination
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000001574
263.0
View
BYDH3_k127_3323498_7
zinc D-Ala-D-Ala carboxypeptidase activity
K08641
-
3.4.13.22
0.0000000000000000000000000000000000000000000000000000000000000000000000000002165
263.0
View
BYDH3_k127_3323498_8
DNA alkylation repair
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000003597
257.0
View
BYDH3_k127_3323498_9
COG2518 Protein-L-isoaspartate carboxylmethyltransferase
K00573
-
2.1.1.77
0.0000000000000000000000000000000000000000000153
169.0
View
BYDH3_k127_3343909_0
exonuclease of the beta-lactamase fold involved in RNA
K07576
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001288
393.0
View
BYDH3_k127_3343909_1
Uracil DNA glycosylase superfamily
K03648
-
3.2.2.27
0.00000000000000000000000000000000000000000000000000000000000000000000002428
247.0
View
BYDH3_k127_3356794_0
GDSL-like Lipase/Acylhydrolase family
-
-
-
0.0000000000000000000000000000000001399
141.0
View
BYDH3_k127_3356794_1
Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
K03694,K03695
GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006508,GO:0006807,GO:0006950,GO:0006986,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009266,GO:0009408,GO:0009628,GO:0010033,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0030312,GO:0030554,GO:0031249,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0035966,GO:0036094,GO:0040007,GO:0042221,GO:0042623,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0071704,GO:0071944,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564
-
0.000000000000000000000000346
110.0
View
BYDH3_k127_3356794_2
Penicillin-binding protein 5, C-terminal domain
K01286,K07258
-
3.4.16.4
0.0000004558
62.0
View
BYDH3_k127_3356794_3
PFAM L,D-transpeptidase catalytic domain
-
-
-
0.0000008006
61.0
View
BYDH3_k127_340763_0
Belongs to the phosphoglycerate kinase family
K00927
-
2.7.2.3
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003188
324.0
View
BYDH3_k127_340763_1
PFAM Bacterial type II secretion system protein F domain
K02653
-
-
0.00000000000000000000000000000000000000000000000000000000000000003246
238.0
View
BYDH3_k127_340763_2
PFAM ABC transporter related
K02003
-
-
0.000000000000000000000000000000000000000000000000003432
198.0
View
BYDH3_k127_340763_3
Triosephosphate isomerase
K01803
-
5.3.1.1
0.0000000000000000000000000000000000000000000001384
177.0
View
BYDH3_k127_340763_4
tripeptidyl-peptidase activity
K07114
-
-
0.000000000000000000000000000000000001692
164.0
View
BYDH3_k127_340763_5
Scavenger mRNA decapping enzyme C-term binding
K02503
-
-
0.0000000000000000000000000000000001159
140.0
View
BYDH3_k127_340763_6
exonuclease RecJ
K07462
-
-
0.000000000000000000000000000000002594
133.0
View
BYDH3_k127_340763_7
Belongs to the peptidase S8 family
K03561,K12287,K20276
-
-
0.0000000000000006389
96.0
View
BYDH3_k127_340763_8
SMART Fibronectin type III domain protein
-
-
-
0.00000000001242
77.0
View
BYDH3_k127_344449_0
Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
K01885,K09698
-
6.1.1.17,6.1.1.24
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001538
323.0
View
BYDH3_k127_344449_1
Peptidase, M23
K21471
-
-
0.000000000000000000000000002393
126.0
View
BYDH3_k127_344449_2
Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
K01975
-
3.1.4.58
0.00000000000000000624
92.0
View
BYDH3_k127_344449_3
Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
K02563
-
2.4.1.227
0.000000000001271
72.0
View
BYDH3_k127_344449_4
HxlR-like helix-turn-helix
-
-
-
0.000000000009172
66.0
View
BYDH3_k127_344449_5
Acetyltransferase (GNAT) domain
-
-
-
0.000000000219
68.0
View
BYDH3_k127_3500043_1
Belongs to the sigma-70 factor family. ECF subfamily
K03088
-
-
0.00000000000000000000000004191
115.0
View
BYDH3_k127_3500043_2
Uncharacterized protein domain (DUF2202)
-
-
-
0.00000000000000000001582
93.0
View
BYDH3_k127_3500043_3
Putative peptidoglycan binding domain
-
-
-
0.00000001893
66.0
View
BYDH3_k127_3822163_0
Required for chromosome condensation and partitioning
K03529
-
-
0.0000000000000000000000000000000000000000000000000000000000000000002834
257.0
View
BYDH3_k127_3822163_1
Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
K03685
GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0032296,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363
3.1.26.3
0.000000000000000000000000000000000000000000000000000004089
198.0
View
BYDH3_k127_3822163_2
Psort location Cytoplasmic, score
K07043
-
-
0.00000000000000000000000000000001768
133.0
View
BYDH3_k127_3822163_3
Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
K03625
-
-
0.00000000000000000000005756
110.0
View
BYDH3_k127_3822163_4
NUDIX domain
K18445
-
3.6.1.61
0.000000000003202
77.0
View
BYDH3_k127_3822163_5
Ribosomal L32p protein family
K02911
-
-
0.0000001608
57.0
View
BYDH3_k127_38516_0
COGs COG0058 Glucan phosphorylase
K00688,K00691
-
2.4.1.1,2.4.1.8
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006917
316.0
View
BYDH3_k127_38516_1
Participates in initiation and elongation during chromosome replication
K02314
-
3.6.4.12
0.00000000000000000000000000000000000000000000000001407
186.0
View
BYDH3_k127_3922429_0
Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
K02355
GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0019538,GO:0030312,GO:0034641,GO:0034645,GO:0040007,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002823
369.0
View
BYDH3_k127_3922429_1
B12 binding domain
-
-
-
0.000000000000000000000000000000000000000000000000000000000007976
228.0
View
BYDH3_k127_3922429_2
Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
K02950
-
-
0.000000000000000000000000000000000000000000000000000006068
192.0
View
BYDH3_k127_3922429_3
One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
K02992
GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904
-
0.000000000000000000000000000000000000000000005856
167.0
View
BYDH3_k127_3922429_4
DUF218 domain
-
-
-
0.0000000000000000001041
96.0
View
BYDH3_k127_3991452_0
Belongs to the class I fructose-bisphosphate aldolase family
K01623
-
4.1.2.13
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001701
324.0
View
BYDH3_k127_3991452_1
Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
K02835
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000007605
269.0
View
BYDH3_k127_3991452_2
Belongs to the universal ribosomal protein uS2 family
K02967
GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904
-
0.0000000000000000000000000000000000000000000000000002324
195.0
View
BYDH3_k127_3991452_3
Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
K02357
GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576
-
0.00000000000000000000000000000000000000000000000002606
185.0
View
BYDH3_k127_3991452_4
This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
K02897
GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904
-
0.0000000000000000000000000002749
123.0
View
BYDH3_k127_3991452_5
Binds the 23S rRNA
K02909
-
-
0.000000000000000000002144
95.0
View
BYDH3_k127_3991452_6
Peptidase M60-like family
-
-
-
0.0000000002654
71.0
View
BYDH3_k127_3991452_7
Phosphomethylpyrimidine kinase
K00874
-
2.7.1.45
0.000004268
58.0
View
BYDH3_k127_3991452_8
agmatine deiminase activity
K08589,K10536,K20276
GO:0003674,GO:0003824,GO:0004175,GO:0004197,GO:0004198,GO:0005488,GO:0005509,GO:0005575,GO:0005576,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008234,GO:0016787,GO:0019538,GO:0043167,GO:0043169,GO:0043170,GO:0044238,GO:0046872,GO:0070011,GO:0071704,GO:0140096,GO:1901564
3.4.22.37,3.5.3.12
0.0007454
53.0
View
BYDH3_k127_4037786_0
Male sterility protein
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000003427
277.0
View
BYDH3_k127_4037786_1
UDP binding domain
K02472
-
1.1.1.336
0.00000000000000000000000000000000000000000000000000000000000000000000000002687
255.0
View
BYDH3_k127_4037786_2
Belongs to the UDP-glucose GDP-mannose dehydrogenase family
K00012,K00066,K02472,K02474,K13015
-
1.1.1.132,1.1.1.136,1.1.1.22,1.1.1.336
0.0000000000000000000000000000000000000000004808
164.0
View
BYDH3_k127_4037786_4
Belongs to the Nudix hydrolase family
K03574
-
3.6.1.55
0.0005457
50.0
View
BYDH3_k127_4097940_0
it plays a direct role in the translocation of protons across the membrane
K02108
-
-
0.000000000000000000000000000000000000005059
156.0
View
BYDH3_k127_4097940_1
F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
K02110,K02124
GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0042802,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600
-
0.00000000000000006049
82.0
View
BYDH3_k127_4097940_2
Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
K02109
-
-
0.00001351
53.0
View
BYDH3_k127_4097940_3
F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
K02113
-
-
0.0001942
49.0
View
BYDH3_k127_4132345_0
DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
K03040
GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576
2.7.7.6
0.00000000000000000000000000000000000000000000000000000000000000000001438
243.0
View
BYDH3_k127_4132345_1
One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
K02986
GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006417,GO:0006450,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0015935,GO:0019222,GO:0019843,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032268,GO:0032270,GO:0032991,GO:0034248,GO:0034250,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0045727,GO:0045903,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0060255,GO:0065007,GO:0065008,GO:0080090,GO:0097159,GO:1901363,GO:1990904,GO:2000112
-
0.0000000000000000000000000000000000000000000000000000009968
198.0
View
BYDH3_k127_4132345_2
Ribosomal protein S11
K02948
GO:0000028,GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0016043,GO:0016070,GO:0016072,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034622,GO:0034641,GO:0034645,GO:0034660,GO:0040007,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0048027,GO:0065003,GO:0070181,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904
-
0.00000000000000000000000000000001015
131.0
View
BYDH3_k127_4132345_3
Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
K02952
GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022613,GO:0032991,GO:0034641,GO:0034645,GO:0042254,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904
-
0.0000000000000000000000000002308
119.0
View
BYDH3_k127_4132345_4
One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
K02518
GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0043021,GO:0043022,GO:0044424,GO:0044444,GO:0044464,GO:0044877
-
0.0000000000000817
73.0
View
BYDH3_k127_4132345_5
Belongs to the bacterial ribosomal protein bL36 family
K02919
-
-
0.000000000018
65.0
View
BYDH3_k127_4193230_0
Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
K03531
GO:0000166,GO:0000910,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005515,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0007049,GO:0008150,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0022402,GO:0022607,GO:0032153,GO:0032506,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034622,GO:0035639,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043933,GO:0044085,GO:0044424,GO:0044464,GO:0051258,GO:0051301,GO:0065003,GO:0071840,GO:0097159,GO:0097367,GO:1901265,GO:1901363
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000498
346.0
View
BYDH3_k127_4193230_1
Alkyl hydroperoxide reductase
K03387
-
-
0.000000000000000000000000000000000000000000000000000000000000000000002891
245.0
View
BYDH3_k127_4193230_2
Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
K03590
-
-
0.00000000000000000000000000000000000000000000008494
184.0
View
BYDH3_k127_4193230_3
Belongs to the peptidase S41A family
K03797
-
3.4.21.102
0.00000000000000000000000000000000000003943
160.0
View
BYDH3_k127_4193230_4
Histidyl-tRNA synthetase
K01892
-
6.1.1.21
0.00000000000000000005263
95.0
View
BYDH3_k127_4193230_5
Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
K07042
-
-
0.0000000000005985
74.0
View
BYDH3_k127_4456490_0
Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
K00948
-
2.7.6.1
0.00000000000000000000000000000000000000000000003653
183.0
View
BYDH3_k127_4456490_1
Peptidase family S49
K04773
-
-
0.0000000000000000000000001368
119.0
View
BYDH3_k127_4456490_2
SNARE associated Golgi protein
-
-
-
0.00000000000183
75.0
View
BYDH3_k127_4456490_3
DNA internalization-related competence protein ComEC Rec2
K02238
-
-
0.00002938
53.0
View
BYDH3_k127_4532233_0
Transposase
K07491
-
-
0.000000000000000000000001674
111.0
View
BYDH3_k127_4532233_1
Protein of unknown function (DUF541)
K09807
-
-
0.00000000000009376
81.0
View
BYDH3_k127_463524_0
Belongs to the ClpA ClpB family
K03696
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001143
347.0
View
BYDH3_k127_463524_1
Catalyzes the synthesis of dihydrouridine, a modified base found in the D-loop of most tRNAs
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004214
313.0
View
BYDH3_k127_463524_2
DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
K02343
-
2.7.7.7
0.000000000000000000000000000000000000004668
149.0
View
BYDH3_k127_4734566_0
nucleotide-excision repair
K03702,K08999
-
-
7.096e-242
765.0
View
BYDH3_k127_4734566_1
Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
K00773
-
2.4.2.29
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005928
328.0
View
BYDH3_k127_4734566_2
FIST_C
-
-
-
0.000000000000002829
80.0
View
BYDH3_k127_4801423_0
Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction
K00962
GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004654,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009892,GO:0009987,GO:0010468,GO:0010605,GO:0010629,GO:0016070,GO:0016071,GO:0016740,GO:0016772,GO:0016779,GO:0019222,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0060255,GO:0065007,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901575
2.7.7.8
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007357
625.0
View
BYDH3_k127_4801423_1
exodeoxyribonuclease III
K01142
-
3.1.11.2
0.0000000000000000000000000000000000000000000000000000000001165
207.0
View
BYDH3_k127_4801423_2
NYN domain
-
-
-
0.000000000000000000000000000000000000000000000000000000295
199.0
View
BYDH3_k127_4801423_3
Tyrosine recombinase XerD
K04763
-
-
0.0000000000000000000000000000000000000000000000000000508
199.0
View
BYDH3_k127_4801423_4
Ribosomal_S15
K02956
GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904
-
0.0000000000000000000000008075
106.0
View
BYDH3_k127_4813485_0
Domain of unknown function (DUF4215)
-
-
-
0.00000008259
64.0
View
BYDH3_k127_4813485_1
nuclear chromosome segregation
-
-
-
0.00007101
55.0
View
BYDH3_k127_5249293_0
DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
K01972
GO:0003674,GO:0003824,GO:0003909,GO:0003911,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016874,GO:0016886,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360
6.5.1.2
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003643
591.0
View
BYDH3_k127_551254_0
Aminotransferase class-III
K01845
-
5.4.3.8
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001545
490.0
View
BYDH3_k127_551254_1
Aminotransferase class-III
K01845,K07257,K21585
-
2.6.1.111,5.4.3.8
0.0000000000000000000000000000000000000000000000000000000000000000000006021
244.0
View
BYDH3_k127_5524368_0
A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
K02469
-
5.99.1.3
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006247
408.0
View
BYDH3_k127_5524368_1
Beta-lactamase superfamily domain
-
-
-
0.00000000000000000001188
100.0
View
BYDH3_k127_5924737_0
cellulase activity
K01178,K14645,K18546
-
3.2.1.3
0.00000000000000000000003934
117.0
View
BYDH3_k127_5924737_1
Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
K00134
GO:0003674,GO:0003824,GO:0004365,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006735,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009986,GO:0009987,GO:0016491,GO:0016620,GO:0016903,GO:0019362,GO:0019637,GO:0019674,GO:0022610,GO:0034641,GO:0043891,GO:0044237,GO:0044238,GO:0044281,GO:0044403,GO:0044406,GO:0044419,GO:0044424,GO:0044464,GO:0044650,GO:0046483,GO:0046496,GO:0051186,GO:0051704,GO:0055086,GO:0055114,GO:0071704,GO:0072524,GO:0140030,GO:0140032,GO:1901360,GO:1901564
1.2.1.12
0.000000000000007338
75.0
View
BYDH3_k127_624474_0
Psort location Cytoplasmic, score 8.96
K08303
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008767
381.0
View
BYDH3_k127_624474_1
domain, Protein
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001529
367.0
View
BYDH3_k127_624474_2
Exonuclease
K02342
-
2.7.7.7
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001605
284.0
View
BYDH3_k127_624474_3
Protein of unknown function (DUF3417)
K00688
GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0016020,GO:0044424,GO:0044444,GO:0044464,GO:0071944
2.4.1.1
0.000000000000000000000000000000000008349
156.0
View
BYDH3_k127_624474_4
Fic/DOC family
-
-
-
0.000000000002569
76.0
View
BYDH3_k127_624474_5
conserved protein
-
-
-
0.000002395
51.0
View
BYDH3_k127_6508303_0
Cation transporting ATPase, C-terminus
K01531
-
3.6.3.2
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006158
290.0
View
BYDH3_k127_6584010_0
Catalyzes the attachment of glycine to tRNA(Gly)
K01880
GO:0003674,GO:0003824,GO:0004812,GO:0004820,GO:0005488,GO:0005515,GO:0016874,GO:0016875,GO:0046983,GO:0140098,GO:0140101
6.1.1.14
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002065
500.0
View
BYDH3_k127_6584010_1
amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
K01870
-
6.1.1.5
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004803
316.0
View
BYDH3_k127_6584010_2
Involved in DNA repair and RecF pathway recombination
K03584
-
-
0.00002442
53.0
View
BYDH3_k127_6584365_0
Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
K01874
GO:0003674,GO:0003824,GO:0004812,GO:0004825,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006431,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576
6.1.1.10
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000163
368.0
View
BYDH3_k127_6584365_1
Belongs to the peptidase M16 family
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000161
280.0
View
BYDH3_k127_6584365_2
AI-2E family transporter
K03548
GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008150,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944
-
0.0000000000000000000000000000006883
136.0
View
BYDH3_k127_663769_0
PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
-
-
-
0.00000000000000000000000000000000000000000000000000000000009769
220.0
View
BYDH3_k127_663769_1
response regulator, receiver
-
-
-
0.000000000000000001005
89.0
View
BYDH3_k127_663769_2
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
-
-
-
0.000001146
56.0
View
BYDH3_k127_66468_0
Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
K00036
-
1.1.1.363,1.1.1.49
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001395
410.0
View
BYDH3_k127_66468_1
6-phosphogluconate dehydrogenase
K00033
-
1.1.1.343,1.1.1.44
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002212
312.0
View
BYDH3_k127_66468_10
Two component, sigma54 specific, transcriptional regulator, Fis family
K07712,K07714
-
-
0.000000000000003705
79.0
View
BYDH3_k127_66468_11
His Kinase A (phosphoacceptor) domain
-
-
-
0.00000000000004733
83.0
View
BYDH3_k127_66468_12
Rhodanese Homology Domain
-
-
-
0.0000000000001836
80.0
View
BYDH3_k127_66468_13
glutathione transferase activity
-
-
-
0.000000000002818
69.0
View
BYDH3_k127_66468_14
-
-
-
-
0.0000001369
60.0
View
BYDH3_k127_66468_15
Belongs to the UPF0235 family
K09131
-
-
0.000005798
51.0
View
BYDH3_k127_66468_16
PFAM Uncharacterised BCR, COG1937
K21600
-
-
0.000393
48.0
View
BYDH3_k127_66468_2
TIGRFAM glycerol-3-phosphate dehydrogenase, anaerobic, C subunit
K00113
-
1.1.5.3
0.0000000000000000000000000000000000000000000000000000000000000000000000000004595
276.0
View
BYDH3_k127_66468_3
PFAM SNARE associated Golgi protein
K03975
-
-
0.000000000000000000000000000000000000000000000000000000000005641
213.0
View
BYDH3_k127_66468_4
Metallo-beta-lactamase superfamily
-
-
-
0.0000000000000000000000000000000000000000000000001141
185.0
View
BYDH3_k127_66468_5
Staphylococcal nuclease homologues
K01174
-
3.1.31.1
0.0000000000000000000000000000000000000000000006088
173.0
View
BYDH3_k127_66468_6
DJ-1/PfpI family
K05520
-
3.5.1.124
0.0000000000000000000000000000002966
131.0
View
BYDH3_k127_66468_7
Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
K03642
-
-
0.0000000000000000000000000002769
118.0
View
BYDH3_k127_66468_8
RNA-binding protein
-
-
-
0.000000000000000000000000008018
112.0
View
BYDH3_k127_66468_9
Rhodanese Homology Domain
-
-
-
0.00000000000000000000007977
108.0
View
BYDH3_k127_6670277_0
Belongs to the glycosyl hydrolase 57 family
K07405
-
3.2.1.1
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001859
523.0
View
BYDH3_k127_6670277_1
Starch synthase catalytic domain
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008534
402.0
View
BYDH3_k127_6670277_2
glucan 1,4-alpha-glucosidase activity
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004465
374.0
View
BYDH3_k127_670440_0
Phosphoglycerol transferase and related proteins,, alkaline phosphatase superfamily
K01138
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000001414
271.0
View
BYDH3_k127_670440_1
PFAM ABC transporter related
K02003
-
-
0.0000000000000000000000000000000000000000000000000000000001366
210.0
View
BYDH3_k127_670440_2
FtsX-like permease family
K02004
-
-
0.0000000000000000000000000000000000000000000000000000964
213.0
View
BYDH3_k127_670440_3
PFAM lipolytic protein G-D-S-L family
K10804
-
3.1.1.5
0.00000000000000000000000000000000000000000000000003317
188.0
View
BYDH3_k127_670440_4
Domain of unknown function (DUF4173)
-
-
-
0.000000000000000000000000000000000002289
155.0
View
BYDH3_k127_670440_5
ATP cobalamin adenosyltransferase
K00798
-
2.5.1.17
0.0000000000000000000000000000002489
129.0
View
BYDH3_k127_670440_6
COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes
-
-
-
0.00000009269
62.0
View
BYDH3_k127_6896311_0
Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
K02434
-
6.3.5.6,6.3.5.7
0.00000000000000000000000000000000000000000000000000000000000000003425
234.0
View
BYDH3_k127_6911104_0
Cell shape determining protein, MreB Mrl family
K03569
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007145
392.0
View
BYDH3_k127_6911104_1
TIGRFAM cell shape determining protein, MreB Mrl family
K03569
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001107
391.0
View
BYDH3_k127_6911104_2
Anticodon binding domain
K01881
-
6.1.1.15
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002935
350.0
View
BYDH3_k127_6911104_3
Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
K00790
-
2.5.1.7
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001768
332.0
View
BYDH3_k127_6911104_4
PDZ domain (Also known as DHR or GLGF)
K11749
-
-
0.0000000000000000000000000000000000000000000000000000000004636
215.0
View
BYDH3_k127_6911104_5
Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
K02838
-
-
0.00000000000000000000000000000000000007327
149.0
View
BYDH3_k127_6911104_6
Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
K04066
-
-
0.00000000000000000000000003568
123.0
View
BYDH3_k127_6911104_7
DNA polymerase III, delta subunit
K02341
GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009360,GO:0009987,GO:0032991,GO:0034641,GO:0034645,GO:0042575,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0061695,GO:0071704,GO:0090304,GO:1901360,GO:1901576,GO:1902494,GO:1990234
2.7.7.7
0.000003366
57.0
View
BYDH3_k127_6911104_8
rod shape-determining protein MreC
K03570
-
-
0.00001692
55.0
View
BYDH3_k127_6967025_0
amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
K01873
-
6.1.1.9
3.542e-202
652.0
View
BYDH3_k127_6967025_1
Integrin alpha (beta-propellor repeats).
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004038
381.0
View
BYDH3_k127_6967025_2
Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
K01409
-
2.3.1.234
0.000000000000000000000000000000000000000000000000000000000000000000000000000000003841
284.0
View
BYDH3_k127_6967025_4
Membrane
-
-
-
0.00000000000000006349
90.0
View
BYDH3_k127_6967025_5
Belongs to the small heat shock protein (HSP20) family
K13993
-
-
0.00000000206
66.0
View
BYDH3_k127_7099232_0
Ribosomal RNA large subunit methyltransferase J
K06442
-
2.1.1.226,2.1.1.227
0.000000000000000000000000000000000000000000000000000000000000321
219.0
View
BYDH3_k127_7099232_1
Possible lysine decarboxylase
K06966
-
3.2.2.10
0.000000000000000000000000000000000000000000000000000000000006572
215.0
View
BYDH3_k127_7099232_2
Magnesium transport protein CorA
K03284
-
-
0.000000000000000000000000000000000000000000000000006056
192.0
View
BYDH3_k127_7099232_3
Cysteine-rich secretory protein family
-
-
-
0.000000000000000000000003574
115.0
View
BYDH3_k127_7099232_4
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines
K01476,K01480
GO:0003674,GO:0003824,GO:0004053,GO:0006082,GO:0006520,GO:0006525,GO:0006807,GO:0008150,GO:0008152,GO:0009064,GO:0009987,GO:0016787,GO:0016810,GO:0016813,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0071704,GO:1901564,GO:1901605
3.5.3.1,3.5.3.11
0.00000000000101
74.0
View
BYDH3_k127_7099232_5
Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
K00851,K01057
-
2.7.1.12,3.1.1.31
0.00000004289
63.0
View
BYDH3_k127_711693_0
isopentenyl-diphosphate delta-isomerase activity
K00949,K01823
GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464
2.7.6.2,5.3.3.2
0.000000000000000000000000000000000000000000000000000000000004883
213.0
View
BYDH3_k127_711693_1
K -dependent Na Ca exchanger
K07301
-
-
0.00000000000000000000000000000000000000009737
162.0
View
BYDH3_k127_711693_2
DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
K05592
GO:0000166,GO:0003674,GO:0003676,GO:0003723,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006725,GO:0006807,GO:0006950,GO:0008026,GO:0008144,GO:0008150,GO:0008152,GO:0008186,GO:0009266,GO:0009295,GO:0009409,GO:0009628,GO:0009987,GO:0010501,GO:0016020,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043590,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0070035,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:1901265,GO:1901360,GO:1901363
3.6.4.13
0.0000001229
53.0
View
BYDH3_k127_7159558_0
Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
K00600
-
2.1.2.1
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001327
399.0
View
BYDH3_k127_7159558_1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
-
-
-
0.000000000000000000000000000000000000000000000000005389
198.0
View
BYDH3_k127_7159558_2
Glycosyl transferase 4-like domain
-
-
-
0.000000000000000000000000000000000000006862
161.0
View
BYDH3_k127_7159558_3
Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
K01491
-
1.5.1.5,3.5.4.9
0.000000000000000000000000000000000002016
148.0
View
BYDH3_k127_7159558_4
RNA pseudouridylate synthase
K06178
-
5.4.99.22
0.000000000000000000000000000000001132
141.0
View
BYDH3_k127_7159558_5
COG1073 Hydrolases of the alpha beta superfamily
K06889
-
-
0.0000000000000000000001198
108.0
View
BYDH3_k127_7159558_6
Transfers the fatty acyl group on membrane lipoproteins
K03820
GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0016021,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0019538,GO:0031224,GO:0031226,GO:0034645,GO:0036211,GO:0042157,GO:0042158,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044425,GO:0044459,GO:0044464,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576
-
0.000000000000224
78.0
View
BYDH3_k127_7187291_0
First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
K01000
-
2.7.8.13
0.000000000000000000000000000000002506
141.0
View
BYDH3_k127_7187291_1
Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
K05896
GO:0003674,GO:0005488,GO:0005515,GO:0042802
-
0.0000000000000000000000001914
115.0
View
BYDH3_k127_7187291_2
Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
K06024
-
-
0.0000000000000000000001743
106.0
View
BYDH3_k127_7187291_3
Belongs to the peptidase S11 family
K07258
GO:0003674,GO:0003824,GO:0004175,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0016787,GO:0019538,GO:0043170,GO:0044238,GO:0070011,GO:0071704,GO:0140096,GO:1901564
3.4.16.4
0.000000000000000000007688
104.0
View
BYDH3_k127_7300600_0
COG0058 Glucan phosphorylase
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001793
618.0
View
BYDH3_k127_7300600_1
Peptidase family M28
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000003819
263.0
View
BYDH3_k127_7300600_2
Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
-
-
-
0.0000000000000000000000000000000000000000000000000000000000001767
239.0
View
BYDH3_k127_7300600_3
Ribonucleotide reductase, barrel domain
K00525
-
1.17.4.1
0.0000000000000000000000000000000000002862
148.0
View
BYDH3_k127_7300600_4
COG0500 SAM-dependent methyltransferases
-
-
-
0.0001992
53.0
View
BYDH3_k127_7330990_0
PFAM Glycosyl hydrolases family 18
-
-
-
0.00000000000000000000000000000003848
143.0
View
BYDH3_k127_7330990_1
Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
K01775
-
5.1.1.1
0.00000000000000000000000000001263
122.0
View
BYDH3_k127_7330990_2
Belongs to the bacterial ribosomal protein bL33 family
K02913
-
-
0.00005188
48.0
View
BYDH3_k127_7348243_0
Heat shock 70 kDa protein
K04043
-
-
9.127e-242
762.0
View
BYDH3_k127_7348243_1
PFAM tRNA synthetases class I (W and Y)
K01867
-
6.1.1.2
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002146
424.0
View
BYDH3_k127_7348243_10
1-acyl-sn-glycerol-3-phosphate acyltransferase
K00655
-
2.3.1.51
0.0000000001419
74.0
View
BYDH3_k127_7348243_11
DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
K03040
GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0030312,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0040007,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576
2.7.7.6
0.0003504
43.0
View
BYDH3_k127_7348243_2
ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
K03686,K05516
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008164
307.0
View
BYDH3_k127_7348243_3
PFAM ATP-binding region, ATPase domain protein
-
-
-
0.00000000000000000000000000000000000000004115
171.0
View
BYDH3_k127_7348243_4
Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
K01876
-
6.1.1.12
0.000000000000000000000000000000000000008724
150.0
View
BYDH3_k127_7348243_5
Ribosomal protein S9/S16
K02996
GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904
-
0.000000000000000000000000002073
116.0
View
BYDH3_k127_7348243_6
Ribosomal protein L17
K02879
-
-
0.0000000000000000000000008695
107.0
View
BYDH3_k127_7348243_7
-
-
-
-
0.00000000000000000000001987
111.0
View
BYDH3_k127_7348243_8
GrpE
K03687
-
-
0.0000000000000000002361
96.0
View
BYDH3_k127_7348243_9
This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
K02871
GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904
-
0.00000000000000000114
89.0
View
BYDH3_k127_7508646_0
The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
K03076
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001746
362.0
View
BYDH3_k127_7508646_1
helicase activity
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003246
317.0
View
BYDH3_k127_7508646_10
Peptidase M50
-
-
-
0.000001284
61.0
View
BYDH3_k127_7508646_11
Binds to the 23S rRNA
K02876
GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904
-
0.000002982
55.0
View
BYDH3_k127_7508646_2
Metallopeptidase family M24
K01265
-
3.4.11.18
0.000000000000000000000000000000000000000000000000000000000000000000000000000004387
268.0
View
BYDH3_k127_7508646_3
This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
K02933
GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904
-
0.000000000000000000000000000000000000000000000000004654
186.0
View
BYDH3_k127_7508646_4
This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
K02931
-
-
0.0000000000000000000000000000000000000000000001106
174.0
View
BYDH3_k127_7508646_5
Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
K02988
-
-
0.00000000000000000000000000000007662
132.0
View
BYDH3_k127_7508646_6
One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
K02994
GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904
-
0.0000000000000000000000000000005967
126.0
View
BYDH3_k127_7508646_7
This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
K02881
GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0008097,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904
-
0.0000000000000000000000000000006083
125.0
View
BYDH3_k127_7508646_8
Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
K00939
-
2.7.4.3
0.0000000000000000005039
95.0
View
BYDH3_k127_7508646_9
Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide
K08641
-
3.4.13.22
0.00000000000000006089
91.0
View
BYDH3_k127_7590489_0
DNA polymerase III alpha subunit
K02337
-
2.7.7.7
3.993e-287
916.0
View
BYDH3_k127_7590489_1
Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
K01868
-
6.1.1.3
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005642
546.0
View
BYDH3_k127_7590489_2
Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
K03470
-
3.1.26.4
0.0000000000000000000000000000000000001174
148.0
View
BYDH3_k127_7590489_3
TIGRFAM amino acid adenylation domain
-
-
-
0.0000005972
53.0
View
BYDH3_k127_7644627_0
TIGRFAM single-stranded-DNA-specific exonuclease RecJ
K07462
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000005483
276.0
View
BYDH3_k127_7644627_1
Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
K03469
GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006401,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576
3.1.26.4
0.00000000000000000000000000000000000000000000000000000000000000004058
231.0
View
BYDH3_k127_7644627_2
Domain of unknown function (DUF4131)
K02238
-
-
0.000000000000000000000000000000001438
144.0
View
BYDH3_k127_7914304_0
Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
K03168
-
5.99.1.2
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002592
552.0
View
BYDH3_k127_7914304_1
In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
K00951,K01139
GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0008728,GO:0008893,GO:0009116,GO:0009117,GO:0009119,GO:0009150,GO:0009259,GO:0009605,GO:0009987,GO:0009991,GO:0015969,GO:0016020,GO:0016740,GO:0016772,GO:0016778,GO:0016787,GO:0016788,GO:0016794,GO:0019637,GO:0019693,GO:0030312,GO:0031667,GO:0033865,GO:0033875,GO:0034032,GO:0034035,GO:0034641,GO:0042278,GO:0042578,GO:0042594,GO:0044237,GO:0044238,GO:0044281,GO:0044464,GO:0046128,GO:0046483,GO:0050896,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:1901068,GO:1901135,GO:1901360,GO:1901564,GO:1901657
2.7.6.5,3.1.7.2
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001736
347.0
View
BYDH3_k127_7914304_2
TIGRFAM DNA protecting protein DprA
K04096
-
-
0.0000000000000000000004776
100.0
View
BYDH3_k127_7933755_0
metalloendopeptidase activity
K03799
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000412
257.0
View
BYDH3_k127_7933755_1
LemA family
K03744
-
-
0.0000000000000000000000000000000000000000000000000000000000005872
215.0
View
BYDH3_k127_7933755_2
Domain of unknown function (DUF4349)
-
-
-
0.00000000000000000000008375
110.0
View
BYDH3_k127_7980862_0
Protein of unknown function (DUF2914)
-
-
-
0.00000000000000000000000000000000000000000000000000000005172
209.0
View
BYDH3_k127_8004322_0
The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
K03701
-
-
0.00000000000000000000000000000000000000000000000000000000000000004051
226.0
View
BYDH3_k127_8004322_1
The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
K03703
-
-
0.00000000000000000000000000000000000000000000141
178.0
View
BYDH3_k127_8028448_0
phenylalanyl-tRNA synthetase beta subunit
K01890
GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494
6.1.1.20
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002692
336.0
View
BYDH3_k127_8028448_1
tRNA synthetases class II core domain (F)
K01889
GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576
6.1.1.20
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000837
291.0
View
BYDH3_k127_8028448_2
Laminin G domain
-
-
-
0.000000000000000000000000000000000164
151.0
View
BYDH3_k127_8260196_0
ABC-type antimicrobial peptide transport system, ATPase component
K02003
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000008624
243.0
View
BYDH3_k127_8260196_1
EVE domain
-
-
-
0.000000000000000000000000000000000000000000000000005605
186.0
View
BYDH3_k127_8260196_10
Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
K02005
-
-
0.0000000000000000004768
101.0
View
BYDH3_k127_8260196_11
Putative diguanylate phosphodiesterase
-
-
-
0.000000000000001014
81.0
View
BYDH3_k127_8260196_12
ATPase histidine kinase DNA gyrase B HSP90 domain protein
-
-
-
0.00000000000008175
76.0
View
BYDH3_k127_8260196_13
Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
K01358
-
3.4.21.92
0.00000000000643
74.0
View
BYDH3_k127_8260196_14
Thioredoxin domain
-
-
-
0.000008844
51.0
View
BYDH3_k127_8260196_15
Part of the tripartite efflux system MacAB-TolC. MacB is a non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides
K05685
GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008150,GO:0015893,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0042221,GO:0042493,GO:0042891,GO:0044425,GO:0044459,GO:0044464,GO:0046677,GO:0050896,GO:0051179,GO:0051234,GO:0071944
-
0.00000987
48.0
View
BYDH3_k127_8260196_16
COG1073 Hydrolases of the alpha beta superfamily
K06889
-
-
0.0004976
51.0
View
BYDH3_k127_8260196_2
Necessary for normal cell division and for the maintenance of normal septation
K03978
-
-
0.000000000000000000000000000000001697
138.0
View
BYDH3_k127_8260196_3
-
K00939
-
2.7.4.3
0.0000000000000000000000000000001883
137.0
View
BYDH3_k127_8260196_4
Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
-
-
-
0.00000000000000000000000000003375
123.0
View
BYDH3_k127_8260196_5
Vitamin k epoxide reductase
-
-
-
0.00000000000000000000000000003457
121.0
View
BYDH3_k127_8260196_6
Belongs to the DsbB family
K03611
-
-
0.00000000000000000000000003856
114.0
View
BYDH3_k127_8260196_7
ABC-type transport system involved in lipoprotein release permease component
K02004
-
-
0.00000000000000000000001316
114.0
View
BYDH3_k127_8260196_8
GDP-mannose mannosyl hydrolase activity
K01515,K03574,K13669,K19710
GO:0000026,GO:0000030,GO:0003674,GO:0003824,GO:0004376,GO:0004377,GO:0006629,GO:0006643,GO:0006664,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009247,GO:0009987,GO:0016740,GO:0016757,GO:0016758,GO:0043750,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0046467,GO:0070085,GO:0071704,GO:0097502,GO:1901135,GO:1901137,GO:1901576,GO:1903509
2.7.7.53,3.6.1.13,3.6.1.55
0.00000000000000000000002418
104.0
View
BYDH3_k127_8260196_9
cytochrome c biogenesis protein
K06196
-
-
0.00000000000000000000009559
112.0
View
BYDH3_k127_839915_0
Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
K03694,K03695
GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0030312,GO:0040007,GO:0044464,GO:0071944
-
2.262e-213
677.0
View
BYDH3_k127_839915_1
ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
K03686
-
-
0.00000000000000246
81.0
View
BYDH3_k127_8418472_0
Belongs to the helicase family. UvrD subfamily
K03657
-
3.6.4.12
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002252
428.0
View
BYDH3_k127_8418472_1
Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
K03601
-
3.1.11.6
0.00000000000000000000000000000000000000000000000001211
200.0
View
BYDH3_k127_8442944_0
Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001986
469.0
View
BYDH3_k127_8442944_1
TIGRFAM Alpha-glucan phosphorylase
K00688
-
2.4.1.1
0.0000000001227
65.0
View
BYDH3_k127_8442944_2
helix_turn_helix multiple antibiotic resistance protein
-
-
-
0.000005458
52.0
View
BYDH3_k127_8442944_3
Biotin-lipoyl like
-
-
-
0.0000675
55.0
View
BYDH3_k127_8538920_0
C-terminal domain of 1-Cys peroxiredoxin
K03386
-
1.11.1.15
0.0000000000000000000000000000000000000000000000000000000000000000000000000000007181
268.0
View
BYDH3_k127_8538920_1
Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
K00791
GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360
2.5.1.75
0.0000000000000000000000000000000000000000000000000000000000000000001126
241.0
View
BYDH3_k127_8538920_2
PFAM YibE F-like protein
-
-
-
0.000000000000000000000000000000000000000209
164.0
View
BYDH3_k127_8538920_3
oligosaccharyl transferase activity
-
-
-
0.00000000000000000000002118
115.0
View
BYDH3_k127_8538920_4
-
-
-
-
0.00000001204
63.0
View
BYDH3_k127_8572911_0
Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate
K01007
-
2.7.9.2
6.304e-292
916.0
View
BYDH3_k127_8572911_1
PFAM peptidase M3A and M3B, thimet oligopeptidase F
K01414
-
3.4.24.70
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006899
437.0
View
BYDH3_k127_8572911_2
Hydroxypyruvate reductase
K11529
-
2.7.1.165
0.00000000000000000000000000000000000000000000000000000000000000000000004034
256.0
View
BYDH3_k127_8572911_3
FES
K03575
-
-
0.0000000000000000000000000000000000000000000000000000000000000385
225.0
View
BYDH3_k127_8572911_4
PFAM membrane protein of
K08972
-
-
0.0000000000000000000000000004629
117.0
View
BYDH3_k127_8572911_5
MYG1 protein
-
GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0016787,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464
-
0.00000000000005165
74.0
View
BYDH3_k127_8588837_0
Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
K02454,K02652
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002768
389.0
View
BYDH3_k127_8588837_1
twitching motility protein
K02669
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007619
333.0
View
BYDH3_k127_8588837_2
PFAM type II secretion system
K02653
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000005582
258.0
View
BYDH3_k127_8588837_3
conserved protein involved in intracellular sulfur reduction
K06039
-
-
0.000000000000000000000000000001491
124.0
View
BYDH3_k127_8588837_4
TipAS antibiotic-recognition domain
K21744
-
-
0.000000000000000000000004903
106.0
View
BYDH3_k127_8588837_5
TIGRFAM type IV pilus assembly protein PilM
K02662
-
-
0.00000000000000000007583
102.0
View
BYDH3_k127_8588837_6
PFAM response regulator receiver
K03413
-
-
0.000000000000000236
83.0
View
BYDH3_k127_8588837_7
ComF family
K00764
-
2.4.2.14
0.000000000000003707
84.0
View
BYDH3_k127_8588837_8
Belongs to the N-Me-Phe pilin family
K02650,K02655
-
-
0.0000001463
60.0
View
BYDH3_k127_8607261_0
TIGRFAM hydrolase, TatD family
K03424
-
-
0.0000000000000000000000000000000000000000000000000007375
193.0
View
BYDH3_k127_8607261_1
Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
K03111
-
-
0.00000000000000000000000000000000004542
139.0
View
BYDH3_k127_8607261_2
Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
K02963
GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904
-
0.000000000000002155
78.0
View
BYDH3_k127_8607261_3
PFAM blue (type 1) copper domain protein
K00728,K01179,K13669
-
2.4.1.109,3.2.1.4
0.000000618
63.0
View
BYDH3_k127_8607261_4
Binds together with S18 to 16S ribosomal RNA
K02990
-
-
0.00001359
54.0
View
BYDH3_k127_8625525_0
Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
K01925
-
6.3.2.9
0.000000000000000000000000000000000000000000000000000000000000000000000000001416
271.0
View
BYDH3_k127_8625525_1
Participates in transcription elongation, termination and antitermination
K02601
-
-
0.00000000000000000000000000000000000000000000000000000000001798
211.0
View
BYDH3_k127_8625525_2
Cytidine and deoxycytidylate deaminase zinc-binding region
K01493
-
3.5.4.12
0.0000000000000000000000000000000000000000000000000000000005029
208.0
View
BYDH3_k127_8625525_3
Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
K02867
GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904
-
0.000000000000000000000000000000000000000000000001124
177.0
View
BYDH3_k127_8625525_4
Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
K00943
-
2.7.4.9
0.00000000000000000000000000000009649
132.0
View
BYDH3_k127_8625525_5
Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth
K00088
GO:0003674,GO:0003824,GO:0003938,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006183,GO:0006195,GO:0006204,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009125,GO:0009126,GO:0009127,GO:0009128,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009154,GO:0009156,GO:0009158,GO:0009161,GO:0009163,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009169,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009261,GO:0009987,GO:0016020,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0030312,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0040007,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046037,GO:0046039,GO:0046040,GO:0046128,GO:0046129,GO:0046390,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0055114,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0072523,GO:0090407,GO:0097292,GO:0097293,GO:1901068,GO:1901070,GO:1901135,GO:1901136,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901657,GO:1901659
1.1.1.205
0.00000000000000000000000000004603
120.0
View
BYDH3_k127_8625525_6
Psort location Periplasmic, score
K09807
-
-
0.00000000000000000003111
102.0
View
BYDH3_k127_8625525_7
AAA domain
K00859
-
2.7.1.24
0.00000000001639
72.0
View
BYDH3_k127_8625525_8
Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
K03073
-
-
0.000000274
55.0
View
BYDH3_k127_8718990_0
PFAM glycosyl transferase, family 51
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001365
459.0
View
BYDH3_k127_8718990_1
The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
K03551
-
3.6.4.12
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002263
382.0
View
BYDH3_k127_8718990_2
Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
K02454,K02652
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001033
360.0
View
BYDH3_k127_8718990_3
Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
K01866
-
6.1.1.1
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005642
308.0
View
BYDH3_k127_8718990_4
Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
K01159
GO:0000725,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008821,GO:0009058,GO:0009059,GO:0009987,GO:0016787,GO:0016788,GO:0016889,GO:0016894,GO:0031297,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0045005,GO:0046483,GO:0048476,GO:0050896,GO:0051716,GO:0071704,GO:0071932,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901576
3.1.22.4
0.00000000000000000000000000000000368
134.0
View
BYDH3_k127_8718990_5
transcriptional regulatory protein
-
GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464
-
0.0000000000000000000000000000000218
132.0
View
BYDH3_k127_8718990_6
Fibronectin type III domain protein
-
-
-
0.0000002029
61.0
View
BYDH3_k127_8744779_0
Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
K03070
GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680
-
1.192e-243
775.0
View
BYDH3_k127_8744779_1
UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain
K00075
-
1.3.1.98
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002497
297.0
View
BYDH3_k127_8744779_2
-O-antigen
-
-
-
0.00000000000000000000000000002243
132.0
View
BYDH3_k127_8764229_0
Multidrug ABC transporter ATPase
K11085
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004307
294.0
View
BYDH3_k127_8764229_1
Immunoglobulin-like domain of bacterial spore germination
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005654
284.0
View
BYDH3_k127_8764229_2
-
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000003177
273.0
View
BYDH3_k127_8810489_0
Pyridine nucleotide-disulphide oxidoreductase
K03885
-
1.6.99.3
0.0000000000000000000000000000004975
132.0
View
BYDH3_k127_8841205_0
Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
K00560
-
2.1.1.45
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009032
383.0
View
BYDH3_k127_8841205_1
Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
K00773
-
2.4.2.29
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000102
274.0
View
BYDH3_k127_8841205_2
ROK family
K00845
-
2.7.1.2
0.00000000000000000000000000000000000000000000000000000000000000001004
234.0
View
BYDH3_k127_8841205_3
PFAM glycoside hydrolase 15-related
-
-
-
0.0000000000000000000000000000000000000000000000000000000000002333
218.0
View
BYDH3_k127_8841205_4
Belongs to the GPI family
K01810,K13810
-
2.2.1.2,5.3.1.9
0.00000000000000000000000000000000000000000000000000000006771
212.0
View
BYDH3_k127_8841205_5
Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
K00287
-
1.5.1.3
0.0000000000000000000000000000000000402
139.0
View
BYDH3_k127_8906486_0
Elongation factor G C-terminus
K06207
GO:0000027,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006996,GO:0008150,GO:0009266,GO:0009408,GO:0009409,GO:0009628,GO:0009987,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0042254,GO:0042255,GO:0042273,GO:0043933,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0065003,GO:0070925,GO:0071826,GO:0071840
-
0.00000000000000000000000000000000000000000000000000000000000000000002771
233.0
View
BYDH3_k127_8906486_1
methyltransferase
-
-
-
0.00000000000000000000000000000000000000000000000000001062
206.0
View
BYDH3_k127_9022391_0
helicase activity
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001267
432.0
View
BYDH3_k127_9022391_1
Putative glycosyl hydrolase domain
-
-
-
0.0000000000000000000000000000000000000000000000000000000000001514
228.0
View
BYDH3_k127_9022391_2
Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
K07056
-
2.1.1.198
0.00000000000000000000000000000000000000000002378
165.0
View
BYDH3_k127_9168720_0
PFAM Cation H exchanger
K03316
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002388
596.0
View
BYDH3_k127_9168720_1
Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
K01840,K15778
GO:0000271,GO:0000287,GO:0003674,GO:0003824,GO:0004614,GO:0004615,GO:0005488,GO:0005975,GO:0005976,GO:0006082,GO:0006629,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0009058,GO:0009059,GO:0009103,GO:0009243,GO:0009244,GO:0009311,GO:0009312,GO:0009405,GO:0009987,GO:0016051,GO:0016053,GO:0016853,GO:0016866,GO:0016868,GO:0017144,GO:0019752,GO:0033692,GO:0034637,GO:0034645,GO:0042120,GO:0042121,GO:0043167,GO:0043169,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044281,GO:0044283,GO:0044419,GO:0046394,GO:0046401,GO:0046402,GO:0046872,GO:0051704,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509
5.4.2.2,5.4.2.8
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002751
381.0
View
BYDH3_k127_9168720_2
DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
K10773
-
4.2.99.18
0.00000000000000000000000000000000000000000000000000004392
191.0
View
BYDH3_k127_9171131_0
Participates in initiation and elongation during chromosome replication
K02314
-
3.6.4.12
0.000000000000000000000000000000000000000000000000000000000000000000000000003882
259.0
View
BYDH3_k127_9171131_1
This protein binds to 23S rRNA in the presence of protein L20
K02888
-
-
0.0000000000000000000000000001977
117.0
View
BYDH3_k127_9171131_2
May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
K06187
-
-
0.0000000000000000000000000006997
120.0
View
BYDH3_k127_9171131_3
Catalyzes the synthesis of GMP from XMP
K01951
GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659
6.3.5.2
0.0000000000000000192
89.0
View
BYDH3_k127_9171131_4
DNA recombination protein RmuC
K09760
-
-
0.000000001549
64.0
View
BYDH3_k127_9215368_0
PFAM asparagine synthase
K01953
-
6.3.5.4
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008558
494.0
View
BYDH3_k127_9215368_1
Glycosyl transferase family 2
K00721,K10012
-
2.4.1.83,2.4.2.53
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003118
324.0
View
BYDH3_k127_9215368_2
Glycosyl transferases group 1
-
-
-
0.000000000000000001267
89.0
View
BYDH3_k127_938646_0
Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
K01928
GO:0000270,GO:0003674,GO:0003824,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0030203,GO:0034645,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576
6.3.2.13
0.00000000000000000000000000000000000000000000000000000000000000000007445
248.0
View
BYDH3_k127_938646_1
Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
K00806
GO:0002094,GO:0003674,GO:0003824,GO:0004659,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006066,GO:0006629,GO:0006720,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016093,GO:0016094,GO:0016740,GO:0016765,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046165,GO:0071704,GO:1901576,GO:1901615,GO:1901617
2.5.1.31
0.000000000000000000000000000000000000000000000000000000000000006883
223.0
View
BYDH3_k127_938646_10
phosphorelay signal transduction system
-
-
-
0.0000000000000000003989
94.0
View
BYDH3_k127_938646_11
-
-
-
-
0.0000000000000003083
81.0
View
BYDH3_k127_938646_12
acylphosphatase activity
K01512
-
3.6.1.7
0.00000000009315
66.0
View
BYDH3_k127_938646_13
cation diffusion facilitator family transporter
K16264
-
-
0.0000755
52.0
View
BYDH3_k127_938646_14
rRNA binding
K02968
GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0004857,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008073,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030234,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042274,GO:0042979,GO:0043043,GO:0043086,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044092,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0050790,GO:0065003,GO:0065007,GO:0065009,GO:0070181,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:0098772,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904
-
0.0009318
47.0
View
BYDH3_k127_938646_2
Responsible for synthesis of pseudouridine from uracil
K06180
GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022613,GO:0031118,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360
5.4.99.23
0.00000000000000000000000000000000000000011
164.0
View
BYDH3_k127_938646_3
The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
K03550
GO:0000217,GO:0000400,GO:0000725,GO:0003674,GO:0003676,GO:0003677,GO:0003678,GO:0003824,GO:0004386,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007154,GO:0008150,GO:0008152,GO:0009314,GO:0009378,GO:0009379,GO:0009432,GO:0009605,GO:0009628,GO:0009987,GO:0009991,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0022607,GO:0031668,GO:0032392,GO:0032508,GO:0032991,GO:0033202,GO:0033554,GO:0034641,GO:0042802,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0048476,GO:0050896,GO:0051259,GO:0051260,GO:0051262,GO:0051276,GO:0051289,GO:0051716,GO:0065003,GO:0071103,GO:0071496,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0140097,GO:1901360,GO:1901363,GO:1902494
3.6.4.12
0.00000000000000000000000000000000000657
144.0
View
BYDH3_k127_938646_4
SpoU rRNA Methylase family
-
-
-
0.00000000000000000000000000000001502
134.0
View
BYDH3_k127_938646_5
Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
K01874
-
6.1.1.10
0.00000000000000000000000000274
117.0
View
BYDH3_k127_938646_6
This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
K02884
GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070180,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904
-
0.00000000000000000000002394
105.0
View
BYDH3_k127_938646_7
ATP cobalamin adenosyltransferase
K00798
-
2.5.1.17
0.0000000000000000000007499
103.0
View
BYDH3_k127_938646_8
Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
K07447
-
-
0.0000000000000000001281
93.0
View
BYDH3_k127_938646_9
Type IV pilus assembly protein PilM;
K02662
-
-
0.0000000000000000003547
99.0
View
BYDH3_k127_9414188_0
ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
K03544
GO:0000166,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005524,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0030163,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0044238,GO:0051301,GO:0070011,GO:0071704,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005026
514.0
View
BYDH3_k127_9414188_1
Psort location Cytoplasmic, score 8.96
K01784,K02473
-
5.1.3.2,5.1.3.7
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000743
316.0
View
BYDH3_k127_9414188_2
Lamin Tail Domain
-
-
-
0.0000000000000000000000007178
120.0
View
BYDH3_k127_9414188_3
DUF218 domain
-
-
-
0.000000000000000000000009803
109.0
View
BYDH3_k127_9414188_4
Belongs to the peptidase S8 family
K01342,K14645
-
3.4.21.62
0.00001193
58.0
View
BYDH3_k127_9414188_5
Glycosyl transferases group 1
-
-
-
0.0001428
53.0
View
BYDH3_k127_9480821_0
phosphorylase kinase regulator activity
-
-
-
0.0000000000000001177
80.0
View
BYDH3_k127_9480821_1
PFAM glycosyl transferase group 1
K15521
-
2.4.1.250
0.00000000000723
76.0
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BYDH3_k127_9480821_2
GtrA-like protein
-
-
-
0.0004876
49.0
View
BYDH3_k127_9578233_0
ABC-type antimicrobial peptide transport system, permease component
K02004
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000001002
278.0
View
BYDH3_k127_9578233_1
Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides
K02003
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000001057
244.0
View
BYDH3_k127_9578233_10
Stress-responsive transcriptional regulator
K03973
-
-
0.00000001881
57.0
View
BYDH3_k127_9578233_2
Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
K03215
-
2.1.1.190
0.000000000000000000000000000000000000000000000000000003884
206.0
View
BYDH3_k127_9578233_3
Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
K00604
GO:0003674,GO:0003824,GO:0004479,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006413,GO:0006464,GO:0006518,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0016742,GO:0019538,GO:0019988,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036211,GO:0043043,GO:0043170,GO:0043412,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0046483,GO:0071704,GO:0071951,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576
2.1.2.9
0.000000000000000000000000000000000000000000000000000228
195.0
View
BYDH3_k127_9578233_4
PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
K01802,K03767,K03768
-
5.2.1.8
0.000000000000000000000000000000000000000000003201
173.0
View
BYDH3_k127_9578233_5
peptidyl-prolyl cis-trans isomerase
K03768
-
5.2.1.8
0.0000000000000000000000000000000000000319
151.0
View
BYDH3_k127_9578233_6
Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
K02493
GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0016740,GO:0016741,GO:0032259,GO:0044424,GO:0044444,GO:0044464
2.1.1.297
0.000000000000000000000000000001204
130.0
View
BYDH3_k127_9578233_7
Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
K04066
-
-
0.0000000000000000000002925
103.0
View
BYDH3_k127_9578233_8
Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
K01462
-
3.5.1.88
0.0000000000000000000008698
104.0
View
BYDH3_k127_9578233_9
phosphoglycerate mutase
K02226
-
3.1.3.73
0.000000000000000000009582
100.0
View
BYDH3_k127_9583170_0
PFAM CoA-binding domain protein
K01905,K22224
-
6.2.1.13
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006934
341.0
View
BYDH3_k127_9583170_1
TIGRFAM pyruvate ferredoxin flavodoxin oxidoreductase, beta subunit
K00175
-
1.2.7.11,1.2.7.3
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001713
284.0
View
BYDH3_k127_9583170_2
pyruvate flavodoxin ferredoxin oxidoreductase domain protein
K00174
-
1.2.7.11,1.2.7.3
0.00000000000000000000000001987
115.0
View
BYDH3_k127_9676933_0
dolichyl-phosphate-mannose-protein mannosyltransferase activity
K00728
-
2.4.1.109
0.00000000000000004771
94.0
View
BYDH3_k127_9676933_1
PFAM Glycosyl transferase family 2
-
-
-
0.00000000000001501
79.0
View
BYDH3_k127_9928532_0
Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
K03553
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001413
434.0
View
BYDH3_k127_9928532_1
FtsK SpoIIIE family protein
K03466
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001348
449.0
View
BYDH3_k127_9983906_0
Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
K03596
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001877
546.0
View
BYDH3_k127_9983906_1
Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane
K03980
-
-
0.0000000000000000000000000000000000006519
158.0
View
BYDH3_k127_9983906_2
MORN repeat variant
-
-
-
0.0001447
55.0
View
