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Overview

ID MAG00195
Name BYDH3_bin.39
Sample SMP0006
Taxonomy
Kingdom Bacteria
Phylum Desulfobacterota
Class DSM-4660
Order Desulfatiglandales
Family HGW-15
Genus JAFGIC01
Species
Assembly information
Completeness (%) 62.41
Contamination (%) 1.0
GC content (%) 50.0
N50 (bp) 2,974
Genome size (bp) 1,787,878

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes1828

Gene name Description KEGG GOs EC E-value Score Sequence
BYDH3_k127_10028737_0 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007576 534.0
BYDH3_k127_10028737_1 PFAM Hemerythrin HHE cation binding domain K07216 - - 0.0000000000000000000000000000000005819 133.0
BYDH3_k127_10028737_2 Antitoxin Phd_YefM, type II toxin-antitoxin system - - - 0.00001483 47.0
BYDH3_k127_10069968_0 4Fe-4S dicluster domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004187 539.0
BYDH3_k127_10069968_1 BadF BadG BcrA BcrD - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009048 350.0
BYDH3_k127_10069968_2 PFAM ATPase, BadF BadG BcrA BcrD type - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002064 331.0
BYDH3_k127_100715_0 HD domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003241 387.0
BYDH3_k127_100715_1 Prokaryotic N-terminal methylation motif - - - 0.00000000000000000000000000005136 121.0
BYDH3_k127_100715_2 Binds together with S18 to 16S ribosomal RNA K02990 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0019843,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0048027,GO:0070181,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000001214 74.0
BYDH3_k127_10106927_0 - - - - 0.00000000000000000000000000000003674 136.0
BYDH3_k127_10106927_1 Flavodoxin domain - - - 0.000000000000000000000000000001999 131.0
BYDH3_k127_10106927_2 NADH flavin oxidoreductase NADH oxidase - - - 0.000000000000003105 81.0
BYDH3_k127_10180825_0 Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin K01151 GO:0003674,GO:0003824,GO:0003906,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008081,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016788,GO:0033554,GO:0034641,GO:0042578,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 3.1.21.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002203 432.0
BYDH3_k127_10180825_1 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000192 347.0
BYDH3_k127_10180825_2 NADH flavin oxidoreductase NADH oxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000005826 238.0
BYDH3_k127_10180825_3 Thioesterase superfamily - - - 0.00000000000000000000000000000000000007222 148.0
BYDH3_k127_10180825_4 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides K00525 - 1.17.4.1 0.0000000000000000000000000000000000002022 145.0
BYDH3_k127_10217450_0 PFAM AICARFT IMPCHase bienzyme K00602 - 2.1.2.3,3.5.4.10 2.009e-195 618.0
BYDH3_k127_10217450_1 Converts GTP to 7,8-dihydroneopterin triphosphate K09007 - 3.5.4.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001973 356.0
BYDH3_k127_10217450_2 Flagellar basal body rod FlgEFG protein C-terminal K02388 - - 0.000000000000000000000009752 108.0
BYDH3_k127_1021951_0 COG1199 Rad3-related DNA helicases K03722 GO:0003674,GO:0003824,GO:0004386,GO:0006139,GO:0006259,GO:0006281,GO:0006301,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008026,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0070035,GO:0071704,GO:0090304,GO:1901360 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000001119 260.0
BYDH3_k127_1021951_1 Helix-turn-helix domain - - - 0.00000000001941 66.0
BYDH3_k127_10233730_0 ATP-dependent helicase nuclease subunit A K16898 - 3.6.4.12 0.0000000000000000000000000000000000000000004238 179.0
BYDH3_k127_1027564_0 Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine K04487 - 2.8.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001601 528.0
BYDH3_k127_1027564_1 Bacterial transferase hexapeptide (six repeats) K00640 - 2.3.1.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006157 413.0
BYDH3_k127_1027564_2 CutA1 divalent ion tolerance protein K03926 - - 0.0000000000000000000000000000209 121.0
BYDH3_k127_10325385_0 Exopolysaccharide biosynthesis protein YbjH - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004576 342.0
BYDH3_k127_10334119_0 Peptidase family M48 - - - 6.839e-197 623.0
BYDH3_k127_10334119_1 AI-2E family transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001536 394.0
BYDH3_k127_10334119_2 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000002206 243.0
BYDH3_k127_10334119_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000000000000000008518 105.0
BYDH3_k127_10338363_0 histidine kinase, HAMP K13598 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006664 475.0
BYDH3_k127_10338363_1 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000186 306.0
BYDH3_k127_10338363_2 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.000000000000000000000000000000000000000000000000000000000000000007228 239.0
BYDH3_k127_10338363_3 histidine kinase HAMP region domain protein K13598 - 2.7.13.3 0.00000000000000000000000000000000000000002191 163.0
BYDH3_k127_10338363_4 Belongs to the UPF0434 family K09791 - - 0.00000000000000000001906 91.0
BYDH3_k127_10347720_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001139 357.0
BYDH3_k127_10347720_1 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 0.00000009159 60.0
BYDH3_k127_10353401_0 cell redox homeostasis - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001048 460.0
BYDH3_k127_10353401_1 NADH flavin oxidoreductase NADH oxidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002491 252.0
BYDH3_k127_10353401_2 Psort location Cytoplasmic, score - - - 0.0001254 53.0
BYDH3_k127_10364961_0 Belongs to the NadC ModD family K00767 - 2.4.2.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002856 305.0
BYDH3_k127_10364961_1 TIGRFAM methionine aminopeptidase, type I K01265 - 3.4.11.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000009468 291.0
BYDH3_k127_10364961_2 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.9 0.000000000000000000162 93.0
BYDH3_k127_10378773_0 Endoribonuclease that initiates mRNA decay K18682 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008761 538.0
BYDH3_k127_10378773_1 Domain of unknown function (DUF362) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001438 286.0
BYDH3_k127_10378773_2 - - - - 0.0000000000000000000005336 100.0
BYDH3_k127_10503773_0 UPF0761 membrane protein K07058 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006548 467.0
BYDH3_k127_10503773_1 tRNA synthetases class I (E and Q), anti-codon binding domain K01886 - 6.1.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001006 386.0
BYDH3_k127_10503773_2 TIGRFAM glutaminyl-tRNA synthetase K01886 - 6.1.1.18 0.0000000000000000000000000000000000000000000000000000000009211 203.0
BYDH3_k127_10504137_0 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003234 430.0
BYDH3_k127_10504137_1 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.00000000000000000000000000000000000000000000000000000000002559 212.0
BYDH3_k127_10504137_2 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.000000000000000000000000000000000000000000000000001172 187.0
BYDH3_k127_10504137_3 Telomere recombination K07566 - 2.7.7.87 0.0000000000000000000000000000000000000000002288 166.0
BYDH3_k127_10515683_0 NADH oxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003427 323.0
BYDH3_k127_10529416_0 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003342 508.0
BYDH3_k127_10529416_1 it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins K02314 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001403 468.0
BYDH3_k127_10529416_2 binds to the 23S rRNA K02939 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000001049 142.0
BYDH3_k127_10535806_0 3'-5' exonuclease K03684 - 3.1.13.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004071 351.0
BYDH3_k127_10535806_1 Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide K03216 - 2.1.1.207 0.00000000000000000000000000000000000000000171 160.0
BYDH3_k127_10549802_0 Tfp pilus assembly protein tip-associated adhesin K02674 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002142 281.0
BYDH3_k127_10549802_1 pilus assembly protein PilW - - - 0.000000000000000000000007648 109.0
BYDH3_k127_10549802_2 PilX N-terminal - - - 0.0000000000008623 76.0
BYDH3_k127_10549802_3 Prokaryotic N-terminal methylation motif K02458,K02671 - - 0.00000001793 61.0
BYDH3_k127_10554198_0 Aminotransferase class I and II K14155 - 4.4.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007063 422.0
BYDH3_k127_10554198_1 Amino acid permease - - - 0.000000000000000000000000000000000000000001315 160.0
BYDH3_k127_10577399_0 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002306 385.0
BYDH3_k127_10577399_1 PFAM ABC transporter substrate binding protein K01989 - - 0.000000000000000000000000000000000000000000000000002202 188.0
BYDH3_k127_10577399_2 Domain of unknown function (DUF3786) - - - 0.0000000000000000000000000000000000000000000399 169.0
BYDH3_k127_10577399_3 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000002056 53.0
BYDH3_k127_1061074_0 COG2931 RTX toxins and related Ca2 -binding proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000015 311.0
BYDH3_k127_1061074_1 23S rRNA-intervening sequence protein - - - 0.000000000000000000000000000000000000000000000000000000000000006602 223.0
BYDH3_k127_1061074_2 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.00000000000000000000000000000000000000000000000000000187 197.0
BYDH3_k127_1061074_3 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.00000000000000000000000000000000000000002642 157.0
BYDH3_k127_1061074_4 MoaE protein K03635 - 2.8.1.12 0.0000000000000000000000000007807 118.0
BYDH3_k127_10687395_0 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005,K15727 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000345 280.0
BYDH3_k127_10687395_1 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000006849 262.0
BYDH3_k127_10687395_2 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.000000000000000000000000000001748 124.0
BYDH3_k127_10698555_0 Belongs to the RNA methyltransferase TrmD family K00554 - 2.1.1.228 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003654 280.0
BYDH3_k127_10698555_1 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.00000000000000000000000000000000000000000000000000000000000000000000002252 251.0
BYDH3_k127_10698555_2 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006281,GO:0006298,GO:0006401,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0032299,GO:0032991,GO:0033554,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576 3.1.26.4 0.000000000000000000000000000000000000000000000000000000000000000002142 233.0
BYDH3_k127_10698555_3 SAM-dependent RNA methyltransferase - - - 0.00000000000000000000000000000000000000000000000000005718 192.0
BYDH3_k127_10698555_4 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000000000000000004295 166.0
BYDH3_k127_10698555_5 Belongs to the UPF0102 family K07460 - - 0.00000000000000000000000000007381 120.0
BYDH3_k127_10698555_6 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.00000000000000000000219 98.0
BYDH3_k127_10698555_7 phosphocarrier protein HPr K11189 - - 0.0000000000000002846 81.0
BYDH3_k127_10698555_8 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K08483 - 2.7.3.9 0.0000004548 53.0
BYDH3_k127_10708098_0 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002235 424.0
BYDH3_k127_10715198_0 Succinyl-CoA ligase like flavodoxin domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002334 457.0
BYDH3_k127_10715198_1 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03767,K03768 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000002026 200.0
BYDH3_k127_10720646_0 NADH flavin oxidoreductase NADH oxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003287 608.0
BYDH3_k127_10720646_1 Domain of unknown function (DUF4301) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003127 323.0
BYDH3_k127_10720646_2 SNARE associated Golgi protein - - - 0.00000000000000000000000000000000000000000000000001318 187.0
BYDH3_k127_1074373_0 COG0463 Glycosyltransferases involved in cell wall biogenesis K13693 - 2.4.1.266 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001682 570.0
BYDH3_k127_1074373_1 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 GO:0000166,GO:0003674,GO:0003824,GO:0004365,GO:0005488,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016052,GO:0016053,GO:0016310,GO:0016491,GO:0016620,GO:0016903,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0036094,GO:0042866,GO:0043436,GO:0043891,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0051287,GO:0055086,GO:0055114,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:0097159,GO:1901135,GO:1901137,GO:1901265,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576 1.2.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006057 391.0
BYDH3_k127_1074373_2 Glycosyltransferase like family 2 K21349 - 2.4.1.268 0.00000000000000000000000001284 109.0
BYDH3_k127_10756826_0 Alpha galactosidase A K07407 - 3.2.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002005 296.0
BYDH3_k127_10756826_1 PFAM peptidase M16 domain protein K06972 - - 0.0000000000000000000000000000000002082 133.0
BYDH3_k127_10756826_2 Rhodanese Homology Domain - - - 0.000000000000000000000006339 106.0
BYDH3_k127_10773683_0 Phosphohydrolase-associated domain K01129 - 3.1.5.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002503 392.0
BYDH3_k127_10773683_1 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.00000000000000000000000000000000000000701 146.0
BYDH3_k127_10773683_2 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.00000000000000000000000000000008316 128.0
BYDH3_k127_10777050_0 PFAM Acyl-CoA dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002129 435.0
BYDH3_k127_10777050_1 Enoyl-CoA hydratase/isomerase K20765 - 3.7.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002296 301.0
BYDH3_k127_10777050_2 4Fe-4S dicluster domain - - - 0.000000000000000000000001999 111.0
BYDH3_k127_10777050_3 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.00000000000004481 75.0
BYDH3_k127_10787989_0 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001299 620.0
BYDH3_k127_10787989_1 Glycyl-tRNA synthetase alpha subunit K01878 - 6.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004633 460.0
BYDH3_k127_10787989_2 NUDIX domain - - - 0.00000000000000000000000000000000003569 141.0
BYDH3_k127_10787989_3 PFAM Aminotransferase class I and II K14287 - 2.6.1.88 0.000000000000000000000000002388 112.0
BYDH3_k127_10787989_4 DNA integration - - - 0.00005418 46.0
BYDH3_k127_10809533_0 cheY-homologous receiver domain - - - 0.000000000000000000000000000000000000000000000000000000000000000788 226.0
BYDH3_k127_10809533_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000008353 141.0
BYDH3_k127_10809533_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000001441 141.0
BYDH3_k127_10829244_0 NADH flavin oxidoreductase NADH oxidase - - - 0.0000000000000000000000000000000000000000000000000000000000001896 234.0
BYDH3_k127_10829244_1 - - - - 0.00000000000000000009281 95.0
BYDH3_k127_10848966_0 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 GO:0003674,GO:0003824,GO:0004418,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002373 349.0
BYDH3_k127_10848966_1 Belongs to the precorrin methyltransferase family K02302,K02303,K13542 - 1.3.1.76,2.1.1.107,4.2.1.75,4.99.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001199 314.0
BYDH3_k127_10848966_2 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) K00991 - 2.7.7.60 0.00000000000000000000000000000000000000000000000000000000001737 213.0
BYDH3_k127_10848966_3 - - - - 0.00000000004917 68.0
BYDH3_k127_10904692_0 NADH flavin oxidoreductase NADH oxidase - - - 1.949e-293 915.0
BYDH3_k127_10910558_0 Pyruvate carboxyltransferase K01571,K01960,K03416 - 2.1.3.1,4.1.1.3,6.4.1.1 2.042e-213 674.0
BYDH3_k127_10910558_1 N-(5'phosphoribosyl)anthranilate (PRA) isomerase K01817 - 5.3.1.24 0.000000000000000000000000000000000000000000000000000000231 201.0
BYDH3_k127_10922487_0 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005967 456.0
BYDH3_k127_10922487_1 Protein of unknown function (DUF1343) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006324 429.0
BYDH3_k127_10922487_2 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.0000000000000000000000000000000000000000000000000001984 193.0
BYDH3_k127_10926221_0 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008142 409.0
BYDH3_k127_10941148_0 Flavodoxin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001377 572.0
BYDH3_k127_10941148_1 Rubredoxin - - - 0.00000000000000000000000002592 108.0
BYDH3_k127_10941148_2 Seven times multi-haem cytochrome CxxCH - - - 0.000000001814 62.0
BYDH3_k127_10951154_0 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004387 362.0
BYDH3_k127_10951154_1 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM K03519 - 1.2.5.3 0.0000000000000000000000000000000000000000000000000000000000000000003168 239.0
BYDH3_k127_10951154_2 2Fe-2S -binding domain K03518 - 1.2.5.3 0.00000000000000000000000000000000000000000000000000000000000006002 217.0
BYDH3_k127_10957939_0 conserved protein UCP033563 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002937 368.0
BYDH3_k127_10957939_1 Ribosomal protein L11 methyltransferase (PrmA) K15460 - 2.1.1.223 0.000000000000001586 79.0
BYDH3_k127_10957939_2 Domain of unknown function (DUF4445) - - - 0.00000009445 53.0
BYDH3_k127_10974677_0 BadF BadG BcrA BcrD - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009514 486.0
BYDH3_k127_10974677_2 - - - - 0.000001686 51.0
BYDH3_k127_11000792_0 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003954 415.0
BYDH3_k127_11000792_1 Thiamine biosynthesis protein ThiC K03147 - 4.1.99.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001484 368.0
BYDH3_k127_11000792_2 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 0.0000000000000000000000000000000000000000000000000000106 190.0
BYDH3_k127_11000792_3 Jag_N K06346 - - 0.000000000000000000000000000000000000000001481 166.0
BYDH3_k127_1102239_0 PFAM Bacterial regulatory protein, Fis family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001117 401.0
BYDH3_k127_1102239_1 PFAM Rubrerythrin - GO:0003674,GO:0005488,GO:0005506,GO:0043167,GO:0043169,GO:0046872,GO:0046914 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002399 267.0
BYDH3_k127_1102239_2 Histidine kinase K02660,K11525 - - 0.000000000000000000843 90.0
BYDH3_k127_1102239_3 - - - - 0.00000000000000001063 86.0
BYDH3_k127_11090466_0 phosphorelay signal transduction system K11384 - - 2.667e-201 635.0
BYDH3_k127_11090466_1 SnoaL-like domain - - - 0.000000000000000000003918 105.0
BYDH3_k127_11146845_0 beta-keto acid cleavage enzyme K18013 - 2.3.1.247 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004038 316.0
BYDH3_k127_11146845_1 Putative cyclase - - - 0.0000000000000000000000000000000000000000000000002141 187.0
BYDH3_k127_11146845_2 PFAM Short-chain dehydrogenase reductase SDR - - - 0.0000000000000000000000000000000000000000000165 169.0
BYDH3_k127_11146845_3 COG2207 AraC-type DNA-binding domain-containing proteins K18954 - - 0.000000000000000000000000000000000000000002607 162.0
BYDH3_k127_11146851_0 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003597 559.0
BYDH3_k127_11146851_1 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003246 302.0
BYDH3_k127_11146851_2 NUDIX domain - - - 0.000000000000000000006243 95.0
BYDH3_k127_11146851_3 PPIC-type PPIASE domain K07533 - 5.2.1.8 0.00000000002598 74.0
BYDH3_k127_11146851_4 peptidylprolyl isomerase K03771 - 5.2.1.8 0.000009414 53.0
BYDH3_k127_11172891_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001479 390.0
BYDH3_k127_11172891_1 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 GO:0003674,GO:0003824,GO:0004042,GO:0004358,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006592,GO:0006807,GO:0008080,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.3.1.1,2.3.1.35 0.00000000000000000000000000000000000000000006386 166.0
BYDH3_k127_11176413_0 FAD dependent oxidoreductase K00244,K13796 - 1.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005919 435.0
BYDH3_k127_11176413_1 SnoaL-like domain - - - 0.0000000000002741 76.0
BYDH3_k127_11185910_0 PFAM fumarate reductase succinate dehydrogenase flavoprotein domain protein - - - 0.000000000000008947 86.0
BYDH3_k127_11216607_0 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000009258 299.0
BYDH3_k127_11216607_1 Evidence 4 Homologs of previously reported genes of - - - 0.0000000000000000000000000000000000000000000000000000000000000000001219 242.0
BYDH3_k127_11216607_2 TPR repeat - - - 0.0000000000000002246 82.0
BYDH3_k127_11216607_3 transport - - - 0.00000000004885 70.0
BYDH3_k127_11216607_4 antisigma factor binding K03598 - - 0.0003573 48.0
BYDH3_k127_1126971_0 Flagellar hook protein FlgE K02390 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001457 408.0
BYDH3_k127_1126971_1 Required for flagellar hook formation. May act as a scaffolding protein K02389 - - 0.0000000000000000000000000000000000000006735 156.0
BYDH3_k127_1126971_2 PFAM Flagellar hook-length control protein K02414 - - 0.0000000001024 70.0
BYDH3_k127_1128847_0 Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02400 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006344 590.0
BYDH3_k127_1128847_1 Flagellar biosynthesis regulator FlhF K02404 GO:0003674,GO:0005488,GO:0005515,GO:0042802 - 0.0000000000000000000000000000000000000000000000000000009144 206.0
BYDH3_k127_1128847_2 Belongs to the ParA family K04562 - - 0.00000000000000000000000000000001968 129.0
BYDH3_k127_11320329_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 - 2.7.7.6 0.0 2018.0
BYDH3_k127_11320329_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001637 458.0
BYDH3_k127_11321246_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 2.067e-248 773.0
BYDH3_k127_11351414_0 type II secretion system protein E - - - 1.028e-222 702.0
BYDH3_k127_11351414_1 PFAM Peptidoglycan-binding domain 1 protein K02450 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003151 319.0
BYDH3_k127_11351414_2 general secretion pathway protein K02650 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003773 288.0
BYDH3_k127_11351414_3 TonB-dependent Receptor Plug K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003312 287.0
BYDH3_k127_11351414_4 Type II secretion system (T2SS), protein F K02653 GO:0002790,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008104,GO:0008150,GO:0009297,GO:0009306,GO:0009987,GO:0015031,GO:0015628,GO:0015833,GO:0016020,GO:0016043,GO:0022607,GO:0030030,GO:0030031,GO:0032940,GO:0033036,GO:0042886,GO:0043711,GO:0044085,GO:0044464,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0071944,GO:0098776 - 0.000000000000000000000000000000000000000138 165.0
BYDH3_k127_11351414_5 Flagellar protein YcgR - - - 0.000000000000000000000000004309 119.0
BYDH3_k127_11351414_6 UPF0761 membrane protein K07058 - - 0.000000000000000000000009071 101.0
BYDH3_k127_11351414_7 Tetratricopeptide repeat - - - 0.00001366 57.0
BYDH3_k127_11362538_0 glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000339 385.0
BYDH3_k127_11362538_1 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008439 356.0
BYDH3_k127_11362538_2 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000000005278 136.0
BYDH3_k127_11368179_0 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate K00931 GO:0003674,GO:0003824,GO:0004349,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006560,GO:0006561,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0018130,GO:0019202,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002397 399.0
BYDH3_k127_11368179_1 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate K00147 - 1.2.1.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001469 325.0
BYDH3_k127_11372527_0 Pyridine nucleotide-disulphide oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001513 493.0
BYDH3_k127_11372527_1 Pyridine nucleotide-disulphide oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001408 415.0
BYDH3_k127_11392070_0 Involved in the TonB-independent uptake of proteins K03641 GO:0003674,GO:0005215,GO:0006810,GO:0008150,GO:0019534,GO:0022857,GO:0051179,GO:0051234,GO:0055085,GO:1901998 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001206 321.0
BYDH3_k127_11392070_1 PFAM MotA TolQ ExbB proton channel K03562 - - 0.0000000000000000000000000000000000000000000000000000000003357 211.0
BYDH3_k127_11392070_2 PFAM Biopolymer transport protein ExbD TolR K03560 - - 0.000000000000000000000000000000000000662 143.0
BYDH3_k127_11392070_3 - - - - 0.0000000000001404 72.0
BYDH3_k127_11392070_4 energy transducer activity K03646,K03832 - - 0.00000004006 64.0
BYDH3_k127_11403444_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004618 333.0
BYDH3_k127_11403444_1 Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) K00097,K22024 - 1.1.1.262,1.1.1.408,1.1.1.409 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003031 308.0
BYDH3_k127_11419646_1 Type II secretion system (T2SS), protein E, N-terminal domain - - - 0.00000008053 63.0
BYDH3_k127_1143706_0 - - - - 0.0000006031 61.0
BYDH3_k127_1143706_1 - - - - 0.0008753 49.0
BYDH3_k127_11481045_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001045 571.0
BYDH3_k127_11481045_1 'Cold-shock' DNA-binding domain K03704 - - 0.0000000000000001119 80.0
BYDH3_k127_11506269_0 ABC transporter C-terminal domain K15738 - - 4.693e-221 702.0
BYDH3_k127_11506269_1 PFAM Radical SAM K06871 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006073 456.0
BYDH3_k127_11506269_2 VanZ like family - - - 0.00002748 51.0
BYDH3_k127_11529464_0 coenzyme F420-1:gamma-L-glutamate ligase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000004411 227.0
BYDH3_k127_11529464_1 PFAM fumarate reductase succinate dehydrogenase flavoprotein domain protein K00244 - 1.3.5.4 0.00000000000000000000000000000000000000000000000002117 199.0
BYDH3_k127_11529464_2 - - - - 0.00002599 49.0
BYDH3_k127_11533278_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 6.209e-248 775.0
BYDH3_k127_11533278_1 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 - - 0.00000000000000000000000000000000000057 141.0
BYDH3_k127_11550491_0 Ethanolamine utilisation protein EutA - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006757 286.0
BYDH3_k127_11550491_1 PFAM UBA THIF-type NAD FAD binding protein K21029 - 2.7.7.80 0.00000000000000000000000000000000000000000000000001941 183.0
BYDH3_k127_11550491_2 ThiS family K03636 - - 0.000000003931 61.0
BYDH3_k127_11599352_0 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region K00124,K00335,K05587,K18331 - 1.12.1.3,1.6.5.3 0.0000000000000000000000000000000000000000000000000000000002277 207.0
BYDH3_k127_11599352_1 PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit K00334 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000004462 201.0
BYDH3_k127_11599352_2 ABC transporter substrate binding protein K01989 - - 0.0000000000000000000000000000000000000000002841 171.0
BYDH3_k127_11599352_3 ABC transporter substrate binding protein K01989 - - 0.0000000000000000000000000000000000002254 153.0
BYDH3_k127_11605568_0 Inorganic H+ pyrophosphatase K15987 - 3.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002014 499.0
BYDH3_k127_11605568_1 Amidohydrolase K07045,K14333,K20941 - 4.1.1.103,4.1.1.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001141 314.0
BYDH3_k127_11605568_2 LysE type translocator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001614 250.0
BYDH3_k127_11605568_3 TatD related DNase K07051 - - 0.0000000000000000000000000000000000000000000000000000000000000005681 228.0
BYDH3_k127_11627331_0 succinate dehydrogenase K00244 - 1.3.5.4 0.000000000000000000000000000000000000000000000000000000006961 216.0
BYDH3_k127_11648658_0 DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity K03581 - 3.1.11.5 3.888e-241 762.0
BYDH3_k127_11648658_1 Belongs to the SfsA family K06206 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007473 276.0
BYDH3_k127_11648658_2 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.0000000003779 60.0
BYDH3_k127_1167579_0 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 GO:0000270,GO:0003674,GO:0003824,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008765,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0030203,GO:0034645,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 6.3.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001879 453.0
BYDH3_k127_1167579_1 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000136 347.0
BYDH3_k127_1167579_2 Penicillin-binding protein, dimerisation domain K03587 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000001795 217.0
BYDH3_k127_1167579_3 Penicillin-binding protein, transpeptidase domain protein K03587,K08384 - 3.4.16.4 0.000000000000000000333 93.0
BYDH3_k127_1167579_4 Histidine kinase - - - 0.00000000000000003897 87.0
BYDH3_k127_11690169_0 exonuclease K07462 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001981 374.0
BYDH3_k127_11690169_1 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002003 275.0
BYDH3_k127_11690169_2 PFAM 6-pyruvoyl tetrahydropterin synthase and K01737 - 4.1.2.50,4.2.3.12 0.000000000000000000000000000000000000001358 151.0
BYDH3_k127_11690169_3 exodeoxyribonuclease I activity - - - 0.000000000000006787 77.0
BYDH3_k127_11696658_0 Amidohydrolase K07045,K14333,K20941 - 4.1.1.103,4.1.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000005543 264.0
BYDH3_k127_11696658_1 Beta-galactosidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000722 248.0
BYDH3_k127_11696658_2 Beta-galactosidase - - - 0.000000000008913 72.0
BYDH3_k127_11714075_0 4Fe-4S binding domain - - - 5.341e-212 673.0
BYDH3_k127_11714075_1 Domain of unknown function (DUF362) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003266 344.0
BYDH3_k127_11714075_2 PFAM aldo keto reductase K07079 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001519 307.0
BYDH3_k127_11748990_0 Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross-linking of the peptide subunits) K05365 - 2.4.1.129,3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001793 425.0
BYDH3_k127_11748990_1 NADH flavin oxidoreductase NADH oxidase - - - 0.000004037 52.0
BYDH3_k127_11791502_0 Protoporphyrinogen oxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004463 560.0
BYDH3_k127_11791502_1 Glycosyl transferase family 21 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003753 377.0
BYDH3_k127_11791502_2 Glycosyl transferases group 1 - - - 0.0000000000000002266 81.0
BYDH3_k127_11791502_3 Outer membrane protein (OmpH-like) K06142 - - 0.0000000000005931 76.0
BYDH3_k127_11791502_4 Flavin containing amine oxidoreductase - - - 0.0000000002944 65.0
BYDH3_k127_11809240_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072,K12257 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004584 531.0
BYDH3_k127_11809240_1 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002375 358.0
BYDH3_k127_11809240_2 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007669 332.0
BYDH3_k127_11809240_3 TIGRFAM preprotein translocase, YajC subunit K03210 - - 0.00000000000000000000004493 102.0
BYDH3_k127_11817497_0 PFAM SPFH domain Band 7 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002252 542.0
BYDH3_k127_11817497_1 TIGRFAM diguanylate cyclase (GGDEF) domain - - - 0.0000000000000000000000000000007746 127.0
BYDH3_k127_11831348_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 1.041e-209 659.0
BYDH3_k127_11831348_1 NADH oxidase - - - 0.0000000000000000000000000000000000001003 149.0
BYDH3_k127_11831348_2 GIY-YIG catalytic domain K07461 - - 0.000000000000000008232 87.0
BYDH3_k127_11831348_4 - - - - 0.000005492 49.0
BYDH3_k127_11831348_5 Psort location Cytoplasmic, score 8.87 - - - 0.0000418 49.0
BYDH3_k127_1183288_0 PFAM glycosyl transferase family 51 K05366 - 2.4.1.129,3.4.16.4 8.859e-194 631.0
BYDH3_k127_1183288_1 Domain of unknown function (DUF4405) - - - 0.0000009963 51.0
BYDH3_k127_11842556_1 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen K00990 - 2.7.7.59 0.0000000000000000000000002525 109.0
BYDH3_k127_11844146_0 deoxyribonuclease V activity K01144,K05982 - 3.1.11.5,3.1.21.7 0.00000000000000000000000000000000000000005088 156.0
BYDH3_k127_11844146_1 - - - - 0.0000000000000000000000000002122 116.0
BYDH3_k127_11844146_2 RDD family - - - 0.000000001019 67.0
BYDH3_k127_11849393_0 HDOD domain - - - 0.000000000000000000000000000000000000000000000000002613 192.0
BYDH3_k127_11849393_1 Methyl-viologen-reducing hydrogenase, delta subunit K14127 - 1.8.98.5,1.8.98.6 0.00000000000000000000000000000000000000007784 151.0
BYDH3_k127_11858250_0 TIGRFAM glutamate synthase (NADPH), homotetrameric K00266 - 1.4.1.13,1.4.1.14 5.184e-236 737.0
BYDH3_k127_11858250_1 PFAM oxidoreductase FAD NAD(P)-binding domain protein K00528 - 1.18.1.2,1.19.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005334 443.0
BYDH3_k127_11858250_2 Belongs to the citrate synthase family K01647 - 2.3.3.1 0.000000000000007518 74.0
BYDH3_k127_11877_0 NmrA-like family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002297 290.0
BYDH3_k127_11877_1 coenzyme F420-1:gamma-L-glutamate ligase activity - - - 0.000000000000000000000000000000000002663 146.0
BYDH3_k127_11877_2 NUDIX domain - - - 0.0000000004698 64.0
BYDH3_k127_11882514_0 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011 572.0
BYDH3_k127_11882514_1 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002551 465.0
BYDH3_k127_11882514_2 Binds the 23S rRNA K02909 - - 0.00000000000000000000000000201 113.0
BYDH3_k127_11882514_3 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0016740,GO:0016741,GO:0018364,GO:0019538,GO:0032259,GO:0036009,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0140096,GO:1901564 2.1.1.297 0.00000006569 55.0
BYDH3_k127_11888216_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003087 441.0
BYDH3_k127_11888216_1 PFAM Protein kinase K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005654 336.0
BYDH3_k127_11888216_2 Thioesterase superfamily - - - 0.0000000000000000000000000000001909 124.0
BYDH3_k127_11890172_0 Bacterial protein of unknown function (DUF853) K06915 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003338 386.0
BYDH3_k127_11890172_1 Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor K03524 - 6.3.4.15 0.00000000000000000000000000000000000000000000000000000000000005165 222.0
BYDH3_k127_11890172_2 Domain of unknown function (DUF3786) - - - 0.0000000000000000000000000000000000000000000000000000000000002223 219.0
BYDH3_k127_11890172_3 PFAM NAD-dependent glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.00000000000000000006234 90.0
BYDH3_k127_11932120_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008978 417.0
BYDH3_k127_11932120_1 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000933 388.0
BYDH3_k127_11932120_2 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 0.000000000000000000000000001068 113.0
BYDH3_k127_11936338_0 COGs COG1053 Succinate dehydrogenase fumarate reductase flavoprotein subunit K00244 - 1.3.5.4 0.000000000000000000000000000000000002706 158.0
BYDH3_k127_11936338_1 COGs COG1053 Succinate dehydrogenase fumarate reductase flavoprotein subunit K00244 - 1.3.5.4 0.0000000000000000000003648 101.0
BYDH3_k127_11936338_2 binding domain protein - - - 0.000000000005692 70.0
BYDH3_k127_11936338_3 Iron only hydrogenase large subunit, C-terminal domain K00533 - 1.12.7.2 0.000000001381 71.0
BYDH3_k127_11936338_4 PFAM fumarate reductase succinate dehydrogenase flavoprotein domain protein K00239,K00244 - 1.3.5.1,1.3.5.4 0.0000001648 63.0
BYDH3_k127_11937423_0 SMART Elongator protein 3 MiaB NifB - - - 6.603e-216 679.0
BYDH3_k127_11971837_0 DNA recombination K09760 - - 3.298e-196 622.0
BYDH3_k127_11971837_1 Tetratricopeptide repeat-like domain - - - 0.00000000000000000001608 100.0
BYDH3_k127_11971929_0 May be involved in the formation or repair of Fe-S clusters present in iron-sulfur proteins K13819 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002868 437.0
BYDH3_k127_11971929_1 Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine K04487 - 2.8.1.7 0.00000000000000000000000000000000000000000000000000000000000246 210.0
BYDH3_k127_11971929_2 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - 0.000003286 52.0
BYDH3_k127_11980015_0 NADH:flavin oxidoreductase / NADH oxidase family - - - 0.00000000000000000000000000000000000000000000000000000006953 213.0
BYDH3_k127_12006609_0 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.00000000000000000000000000000000000000000000000000000000000000000000000001145 259.0
BYDH3_k127_12006609_1 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 GO:0003674,GO:0003824,GO:0004595,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.7.3 0.0000000000000000000000000000000000000000000000007447 177.0
BYDH3_k127_12006609_2 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.00000000000000000000000000000000000009949 144.0
BYDH3_k127_12006609_3 PFAM conserved K08316 - 2.1.1.171 0.00000000000000000000000000000000000009987 148.0
BYDH3_k127_12048038_0 Carboxylesterase family - - - 0.0000000000000000000000000000000000000000000000000000000001909 218.0
BYDH3_k127_12048038_1 - - - - 0.0001846 44.0
BYDH3_k127_12070848_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005698 376.0
BYDH3_k127_12070848_1 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 - 2.1.1.190 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005152 308.0
BYDH3_k127_12070848_2 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 - 2.1.1.190 0.000000000000000000000000000000000000000000000000000000000000002938 221.0
BYDH3_k127_12070848_3 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000000000000000006131 199.0
BYDH3_k127_12070848_4 PFAM Cytochrome C biogenesis protein transmembrane region K04084 - 1.8.1.8 0.0001621 46.0
BYDH3_k127_12093111_0 FAD dependent oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001318 522.0
BYDH3_k127_12093111_1 FAD dependent oxidoreductase - - - 0.0000000000000000000000000000000000000001642 152.0
BYDH3_k127_12102777_0 FIST N domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001463 423.0
BYDH3_k127_12107861_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 9.484e-258 812.0
BYDH3_k127_12107861_1 Belongs to the MurCDEF family K02558 - 6.3.2.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001477 277.0
BYDH3_k127_12107861_2 Aminoacyl-tRNA editing domain K01881 - 6.1.1.15 0.00000000000000000000000000000000000000000000000000000000000000000002614 237.0
BYDH3_k127_12107861_3 Belongs to the bacterial ribosomal protein bL28 family K02902 - - 0.00000000000000000001615 91.0
BYDH3_k127_1212399_0 Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily K00254,K02823,K17828 GO:0003674,GO:0003824,GO:0004152,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006206,GO:0006207,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016491,GO:0016627,GO:0016635,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019856,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046112,GO:0046390,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 1.3.1.14,1.3.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003044 381.0
BYDH3_k127_1212399_2 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 0.00000000000000000000000000000000000000000000000000001155 198.0
BYDH3_k127_1212399_3 Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD( ) K02823 - - 0.0000000000000000000000000000000000000000000007148 173.0
BYDH3_k127_12149142_0 tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000004436 208.0
BYDH3_k127_12149142_1 fumarate reductase, flavoprotein subunit - - - 0.00000000000007911 78.0
BYDH3_k127_12149142_2 permease YjgP YjgQ family K07091 - - 0.000000000001039 75.0
BYDH3_k127_12150505_0 Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002567 298.0
BYDH3_k127_12150505_1 ABC transporter K09812 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001346 259.0
BYDH3_k127_12150505_2 Part of the ABC transporter FtsEX involved in cellular division K09811 - - 0.0000000000000000000000000000000000000000006279 169.0
BYDH3_k127_12150505_3 Peptidase family M23 K21471 - - 0.00000000004068 72.0
BYDH3_k127_12159828_0 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA K03500 - 2.1.1.176 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001067 379.0
BYDH3_k127_12159828_1 Protein of unknown function DUF116 K09729 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000201 310.0
BYDH3_k127_12159828_2 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 - 2.1.2.9 0.00000000000000000000000000000000000000000000000000005251 193.0
BYDH3_k127_12159828_3 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.000000000000000000000000000000000000008367 147.0
BYDH3_k127_12159828_4 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 GO:0003674,GO:0003824,GO:0004479,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006413,GO:0006464,GO:0006518,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0016742,GO:0019538,GO:0019988,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036211,GO:0043043,GO:0043170,GO:0043412,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0046483,GO:0071704,GO:0071951,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.1.2.9 0.00000000000000000000000000000001876 128.0
BYDH3_k127_12210258_0 4Fe-4S dicluster domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004362 343.0
BYDH3_k127_12210258_1 SnoaL-like domain - - - 0.0000008465 58.0
BYDH3_k127_12229466_0 Protein involved in receptor activity and transport - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008353 356.0
BYDH3_k127_12233043_0 PFAM Radical SAM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004817 528.0
BYDH3_k127_12233043_1 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005883 279.0
BYDH3_k127_12259154_0 General secretory system II, protein E domain protein K02652 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003364 515.0
BYDH3_k127_12271609_0 PFAM cell wall hydrolase autolysin K01448 - 3.5.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001058 417.0
BYDH3_k127_12271609_1 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.00000000000000000000000009225 109.0
BYDH3_k127_12283165_0 PFAM Polysulphide reductase, NrfD K00185 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008701 505.0
BYDH3_k127_12283165_1 4Fe-4S dicluster domain K00184 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009359 366.0
BYDH3_k127_12283165_2 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K08357 - - 0.00000000000000000000000000000000000000000001243 173.0
BYDH3_k127_12312907_0 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 GO:0003674,GO:0003824,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006573,GO:0006575,GO:0006732,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016874,GO:0016879,GO:0016881,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901564,GO:1901566,GO:1901576,GO:1901605 6.3.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001517 340.0
BYDH3_k127_12312907_1 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 GO:0003674,GO:0003824,GO:0004478,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016740,GO:0016765,GO:0044424,GO:0044444,GO:0044464 2.5.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002584 276.0
BYDH3_k127_12312907_2 Deoxynucleoside kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000471 234.0
BYDH3_k127_12312907_3 Transcription termination factor nusG K05785 - - 0.0000000000000000000000000000000000002778 147.0
BYDH3_k127_12312907_4 23S rRNA-intervening sequence protein K13010 - 2.6.1.102 0.0000000000000000000000000000000005219 135.0
BYDH3_k127_12326226_0 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 3.232e-196 621.0
BYDH3_k127_12368872_0 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001625 425.0
BYDH3_k127_12368872_1 NfeD-like C-terminal, partner-binding K07403 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000138 362.0
BYDH3_k127_12368872_2 Belongs to the GARS family K01945,K13713 GO:0000166,GO:0003674,GO:0003824,GO:0004637,GO:0005488,GO:0005524,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016874,GO:0016879,GO:0016887,GO:0017076,GO:0017111,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0033554,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0050896,GO:0051716,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.3.2.6,6.3.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008236 271.0
BYDH3_k127_12368872_3 TIGRFAM Phage SPO1 DNA polymerase-related protein K21929 - 3.2.2.27 0.0000000000000000000000000000000000000000000000000000448 195.0
BYDH3_k127_12368872_4 positive regulation of growth rate K02030 - - 0.00000000000000002936 91.0
BYDH3_k127_12368872_5 Belongs to the GARS family K01945 - 6.3.4.13 0.00000000001059 64.0
BYDH3_k127_12413848_0 xanthine dehydrogenase activity K11178 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0008150,GO:0008152,GO:0016491,GO:0016903,GO:0036094,GO:0042597,GO:0043167,GO:0043168,GO:0044464,GO:0048037,GO:0050660,GO:0050662,GO:0055114,GO:0097159,GO:1901265,GO:1901363 1.17.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002751 358.0
BYDH3_k127_12413848_1 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001198 277.0
BYDH3_k127_12416201_0 Aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000481 438.0
BYDH3_k127_12416201_1 Aldehyde ferredoxin oxidoreductase, N-terminal domain K03738 - 1.2.7.5 0.000000000000000000000000000000000000000000000000000005546 191.0
BYDH3_k127_12416201_2 - - - - 0.0000000000000000000000002523 114.0
BYDH3_k127_12416201_3 PFAM thiamineS protein - - - 0.000000000000000005171 85.0
BYDH3_k127_12416201_4 PFAM thiamineS protein - - - 0.0000000000704 65.0
BYDH3_k127_1246488_0 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002716 581.0
BYDH3_k127_1246488_1 Belongs to the 'phage' integrase family. XerC subfamily K03733,K04763 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001365 318.0
BYDH3_k127_1246488_2 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 GO:0000166,GO:0000287,GO:0000502,GO:0003674,GO:0003824,GO:0004175,GO:0004298,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006807,GO:0006950,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009266,GO:0009376,GO:0009408,GO:0009628,GO:0009987,GO:0016043,GO:0016787,GO:0017076,GO:0019538,GO:0019904,GO:0022607,GO:0030163,GO:0030554,GO:0031597,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0034214,GO:0035639,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046872,GO:0050896,GO:0051259,GO:0051603,GO:0065003,GO:0070003,GO:0070011,GO:0071704,GO:0071840,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1902494,GO:1904949,GO:1905368,GO:1905369 3.4.25.2 0.000000000000000000000000000000000000000000000000000000000000000000004949 239.0
BYDH3_k127_1246488_3 Elongation factor Tu domain 2 K02355 - - 0.00000000000000000001024 94.0
BYDH3_k127_12516021_0 Outer membrane lipoprotein Slp family K07285 - - 0.0000000000000000000000000000000001449 141.0
BYDH3_k127_12516021_1 Outer membrane lipoprotein Slp family K07285 - - 0.00000000000000000000000000000001524 132.0
BYDH3_k127_1251881_0 Homoserine dehydrogenase K00003 - 1.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003887 475.0
BYDH3_k127_1251881_1 Proposed homoserine kinase K15635 - 5.4.2.12 0.000000000000000000000000000000000000000000000000000000007627 203.0
BYDH3_k127_12519024_0 Flavodoxin domain - - - 0.0000000000000000000000000000000002139 145.0
BYDH3_k127_12519024_1 succinate dehydrogenase - - - 0.00000000000000000000005162 101.0
BYDH3_k127_12525541_0 TIGRFAM histidyl-tRNA synthetase K01892 - 6.1.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000543 482.0
BYDH3_k127_12525541_1 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004618 475.0
BYDH3_k127_125281_0 NADH:flavin oxidoreductase / NADH oxidase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004751 403.0
BYDH3_k127_125281_1 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 - 1.1.1.133 0.000000000000000000000000000000000647 136.0
BYDH3_k127_125281_2 PFAM NADH flavin oxidoreductase NADH oxidase K00219 - 1.3.1.34 0.0000000000001598 71.0
BYDH3_k127_12559338_0 PFAM response regulator receiver - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004987 447.0
BYDH3_k127_12559338_1 PFAM tRNA synthetases class I (E and Q), catalytic domain K01886 - 6.1.1.18 0.0000000000000000000000000000000000000000000000000000000000000000007238 230.0
BYDH3_k127_12564646_0 beta-keto acid cleavage enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000218 333.0
BYDH3_k127_12564646_1 Enoyl-(Acyl carrier protein) reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003409 304.0
BYDH3_k127_12564646_2 Putative cyclase - - - 0.00000000000000000000000000000000005605 134.0
BYDH3_k127_12564646_3 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K00074 - 1.1.1.157 0.0001727 45.0
BYDH3_k127_12590096_0 Belongs to the universal ribosomal protein uS2 family K02967 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002485 323.0
BYDH3_k127_12590096_1 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002382 283.0
BYDH3_k127_12590096_2 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002441 273.0
BYDH3_k127_12590096_3 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 GO:0002181,GO:0002184,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043021,GO:0043023,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0044877,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000000000007873 216.0
BYDH3_k127_12592563_0 Fe-S oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002536 446.0
BYDH3_k127_1260329_0 RadC-like JAB domain K03630 - - 0.0000000000000000000000000000000000000000000000000245 184.0
BYDH3_k127_1260329_1 - - - - 0.0000000007057 66.0
BYDH3_k127_1260329_2 - - - - 0.0000008623 56.0
BYDH3_k127_1260329_3 - - - - 0.0002643 43.0
BYDH3_k127_12608436_0 type II secretion system K02454 - - 4.818e-245 771.0
BYDH3_k127_12608436_1 May be involved in recombinational repair of damaged DNA K03631 - - 0.000000000000000000000000000000000000000000000000000006049 198.0
BYDH3_k127_12608436_2 Tfp pilus assembly protein tip-associated adhesin K02674 - - 0.0000000000000000000002375 105.0
BYDH3_k127_12613683_0 Phosphoribosyl-ATP pyrophosphohydrolase K02499,K04765 - 3.6.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000009985 259.0
BYDH3_k127_12613683_1 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814 - 2.4.1.129 0.00000000000000000000000000000000000000000000000000000007235 202.0
BYDH3_k127_12613683_2 Colicin V production protein K03558 - - 0.00000000009615 69.0
BYDH3_k127_1263783_0 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.0 1316.0
BYDH3_k127_1263783_1 CobB/CobQ-like glutamine amidotransferase domain K01952 - 6.3.5.3 0.000000000000000000000000000000000000000000000000000002444 195.0
BYDH3_k127_12646672_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 5.367e-285 889.0
BYDH3_k127_12676255_0 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000002547 246.0
BYDH3_k127_12676255_1 C4-type zinc ribbon domain K07164 - - 0.000000000000000000000000000000000000007459 154.0
BYDH3_k127_12697684_0 Elongator protein 3, MiaB family, Radical SAM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003777 366.0
BYDH3_k127_12697684_1 Domain of unknown function (DUF4833) - - - 0.00000000000000009718 83.0
BYDH3_k127_12705079_0 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 GO:0000154,GO:0000179,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.182 0.0000000000000000000000000000000000000000000000000001017 194.0
BYDH3_k127_12705079_1 S23 ribosomal protein - - - 0.00000000000000000000000000000832 122.0
BYDH3_k127_12728338_0 Belongs to the RtcB family K14415 - 6.5.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006991 284.0
BYDH3_k127_12728338_1 Archease protein family (MTH1598/TM1083) - - - 0.0000000000000000000000000007803 119.0
BYDH3_k127_12728338_2 - - - - 0.0000000000000000000001259 102.0
BYDH3_k127_12780399_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 1.29e-246 769.0
BYDH3_k127_12780399_1 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006767 393.0
BYDH3_k127_12780399_2 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.0000000000000000000000000000000000000001505 154.0
BYDH3_k127_12780399_3 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.00000000000000000000000000000000000001764 150.0
BYDH3_k127_12780399_4 Penicillin-binding Protein dimerisation domain K05515 - 3.4.16.4 0.000000000000000000000000000000000001161 144.0
BYDH3_k127_12780399_5 Polymer-forming cytoskeletal - - - 0.000000000000000000000000000005313 122.0
BYDH3_k127_12780399_6 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.00000000008036 68.0
BYDH3_k127_12780399_7 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02109 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045260,GO:0045263,GO:0045264,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098797,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.0000000006331 68.0
BYDH3_k127_1280132_0 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine K00831 - 2.6.1.52 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001488 510.0
BYDH3_k127_1280132_1 PFAM Cobyrinic acid ac-diamide synthase K07321 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009528 354.0
BYDH3_k127_1280132_2 Asparaginyl-tRNA synthetase K01893 GO:0000166,GO:0003674,GO:0003824,GO:0004812,GO:0004816,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006421,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.1.1.22 0.0000000000000000000000000000000000000000000000000000000000000001254 225.0
BYDH3_k127_1280132_3 NUDIX domain K03574 - 3.6.1.55 0.0000000000000000000000000000000000000282 147.0
BYDH3_k127_12820147_0 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001077 596.0
BYDH3_k127_12820147_1 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.000000000000000000000000000000000000000000000000000000000003875 214.0
BYDH3_k127_12820147_2 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.0000000000000369 72.0
BYDH3_k127_12825825_0 PFAM ABC transporter K06158 - - 4.048e-203 651.0
BYDH3_k127_12858210_0 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system K01547 - 3.6.3.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000017 609.0
BYDH3_k127_12858210_1 Histidine kinase K07646 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000002251 231.0
BYDH3_k127_12858210_2 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex K01548 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0008150,GO:0008324,GO:0008556,GO:0009987,GO:0015075,GO:0015077,GO:0015079,GO:0015318,GO:0015399,GO:0015405,GO:0015662,GO:0015672,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0030001,GO:0031224,GO:0034220,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044425,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0071804,GO:0071805,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0099131,GO:0099132 3.6.3.12 0.000000000000000000000000000000000000000000000000000002469 194.0
BYDH3_k127_12858210_3 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex K01548 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0008150,GO:0008324,GO:0008556,GO:0009987,GO:0015075,GO:0015077,GO:0015079,GO:0015318,GO:0015399,GO:0015405,GO:0015662,GO:0015672,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0030001,GO:0031224,GO:0034220,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044425,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0071804,GO:0071805,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0099131,GO:0099132 3.6.3.12 0.000000291 52.0
BYDH3_k127_12892186_0 TIGRFAM threonine synthase K01733 - 4.2.3.1 3.41e-216 681.0
BYDH3_k127_12892186_1 Low molecular weight phosphatase family K01104 GO:0003674,GO:0003824,GO:0004721,GO:0004725,GO:0005575,GO:0005576,GO:0005623,GO:0005886,GO:0006464,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009405,GO:0009605,GO:0009607,GO:0009987,GO:0016020,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019538,GO:0035335,GO:0035821,GO:0036211,GO:0042578,GO:0043170,GO:0043207,GO:0043412,GO:0044003,GO:0044046,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044403,GO:0044419,GO:0044464,GO:0050896,GO:0051701,GO:0051704,GO:0051707,GO:0051817,GO:0052031,GO:0052046,GO:0052047,GO:0052048,GO:0052083,GO:0052155,GO:0052173,GO:0052200,GO:0052212,GO:0052255,GO:0052278,GO:0052294,GO:0052552,GO:0052553,GO:0052561,GO:0052562,GO:0052564,GO:0052572,GO:0071704,GO:0071944,GO:0075136,GO:0140096,GO:1901564 3.1.3.48 0.000000006336 59.0
BYDH3_k127_1290256_0 GMP synthase C terminal domain K01951 - 6.3.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001048 283.0
BYDH3_k127_1290256_1 HI0933-like protein - - - 0.00000000000000000001851 103.0
BYDH3_k127_12904788_0 CobQ CobB MinD ParA nucleotide binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002423 418.0
BYDH3_k127_12904788_1 CobQ CobB MinD ParA nucleotide binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003418 383.0
BYDH3_k127_12904788_10 Methyltransferase type 11 - - - 0.00008326 45.0
BYDH3_k127_12904788_2 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006588 305.0
BYDH3_k127_12904788_3 Metallo-beta-lactamase superfamily K06897 - 2.5.1.105 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006415 289.0
BYDH3_k127_12904788_4 PFAM Dinitrogenase iron-molybdenum cofactor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000465 235.0
BYDH3_k127_12904788_5 PFAM Dinitrogenase iron-molybdenum cofactor - - - 0.000000000000000000000000000000000000000000000000000000001427 202.0
BYDH3_k127_12904788_6 RESPONSE REGULATOR receiver - - - 0.0000000000000000000000000000000000000003818 154.0
BYDH3_k127_12904788_7 Regulatory protein, FmdB family - - - 0.0000000000000000000000003091 107.0
BYDH3_k127_12904788_8 Mo-molybdopterin cofactor metabolic process K03154 - - 0.0000000000000001079 83.0
BYDH3_k127_12904788_9 nitrogen fixation - - - 0.0000003963 57.0
BYDH3_k127_12913815_0 COG1055 Na H antiporter NhaD and related arsenite - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007454 453.0
BYDH3_k127_12913815_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001382 446.0
BYDH3_k127_12938764_0 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 GO:0003674,GO:0003824,GO:0004042,GO:0004358,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006592,GO:0006807,GO:0008080,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.3.1.1,2.3.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002484 273.0
BYDH3_k127_12938764_1 TIGRFAM 40-residue YVTN family beta-propeller repeat - - - 0.00000000000000000000000000000000000000000005202 180.0
BYDH3_k127_12946657_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 2.801e-257 797.0
BYDH3_k127_12946657_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.00000000000000000000000000000000000000000000000000000000000000001272 231.0
BYDH3_k127_12946657_2 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016469,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0032991,GO:0033178,GO:0034220,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0045259,GO:0045261,GO:0046034,GO:0046390,GO:0046483,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.000000000000000000000000000000304 126.0
BYDH3_k127_12947697_0 SMART metal-dependent phosphohydrolase HD region K01129 - 3.1.5.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000544 449.0
BYDH3_k127_12961778_0 Bacterial flagellin N-terminal helical region K02397 - - 0.0000000000000000000000000000000000000000000000000000000000000002353 231.0
BYDH3_k127_12961778_1 TIGRFAM flagellar hook-associated protein FlgK K02396 - - 0.0000000000000000000000000000000000000003158 154.0
BYDH3_k127_12961778_2 Binds to the C-terminal region of flagellin, which is implicated in polymerization, and participates in the assembly of the flagellum K13626 - - 0.00000000000000000000000000000001203 131.0
BYDH3_k127_12961778_3 Could accelerate the degradation of some genes transcripts potentially through selective RNA binding K03563 - - 0.0000000000000005364 80.0
BYDH3_k127_12976094_0 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 1.232e-221 698.0
BYDH3_k127_12976094_1 - - - - 0.0003851 45.0
BYDH3_k127_1298949_0 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000001252 134.0
BYDH3_k127_1298949_1 Tetratricopeptide repeat - - - 0.0000000000000000000000000006521 121.0
BYDH3_k127_12997411_0 beta-keto acid cleavage enzyme - - - 0.0000000000000000000000000000000000000000000000005764 188.0
BYDH3_k127_12997411_1 FMN binding - - - 0.0002948 47.0
BYDH3_k127_13005213_0 Protein conserved in bacteria K09859 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008212 413.0
BYDH3_k127_13005213_1 Peptidoglycan-synthase activator LpoB K07337 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006357 315.0
BYDH3_k127_13005213_2 AAA domain, putative AbiEii toxin, Type IV TA system - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001236 246.0
BYDH3_k127_13005213_3 DSHCT - - - 0.0000000000000000000000000007319 115.0
BYDH3_k127_13033418_0 4-hydroxyphenylacetate 3-hydroxylase C terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009916 279.0
BYDH3_k127_13033418_1 Cupin domain - - - 0.000000000000000000000000000000000000001141 151.0
BYDH3_k127_13093422_0 PFAM SAICAR synthetase K01923 GO:0003674,GO:0003824,GO:0004639,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.2.6 0.00000000000000000000000000000000000000000000000000000000000001684 217.0
BYDH3_k127_13093422_1 SAICAR synthetase K01923 GO:0003674,GO:0003824,GO:0004639,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.2.6 0.00000000000000000000000000000000000000000000000003192 182.0
BYDH3_k127_13093422_2 Transglycosylase SLT domain - - - 0.00000000000000002375 89.0
BYDH3_k127_13109133_0 Psort location Cytoplasmic, score - - - 0.0002654 51.0
BYDH3_k127_13111586_0 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001203 442.0
BYDH3_k127_13117099_0 4 iron, 4 sulfur cluster binding - - - 1.915e-285 917.0
BYDH3_k127_13117099_1 PFAM 3-Oxoacyl- acyl-carrier-protein (ACP) synthase III - - - 0.000000000000000000000000000000000001314 144.0
BYDH3_k127_1376699_0 FAD binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002239 320.0
BYDH3_k127_1376699_1 - - - - 0.000000000000000000000003927 108.0
BYDH3_k127_1376699_2 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.00000000000000000001348 94.0
BYDH3_k127_1380249_0 Peptidase family M48 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006811 510.0
BYDH3_k127_1380249_1 PFAM NAD(P)H dehydrogenase (quinone) K00355 - 1.6.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001767 287.0
BYDH3_k127_1380249_2 - - - - 0.00000000000000000000000000000000002163 141.0
BYDH3_k127_1433769_0 DNA internalization-related competence protein ComEC Rec2 K02238 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002133 429.0
BYDH3_k127_1433769_1 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.00000000000000000000000000000000000000000000007604 170.0
BYDH3_k127_1449789_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004779 466.0
BYDH3_k127_1449789_1 Branched-chain amino acid transport system / permease component K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002526 268.0
BYDH3_k127_1449789_2 branched-chain amino acid K01996 - - 0.00000000000000000000000000000000000000000000000000000002228 205.0
BYDH3_k127_1449789_3 COG0559 Branched-chain amino acid ABC-type transport system, permease components K01997 - - 0.000000000000000000000000007299 116.0
BYDH3_k127_1449789_4 COG0559 Branched-chain amino acid ABC-type transport system, permease components K01997 - - 0.000006607 51.0
BYDH3_k127_1475513_0 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 GO:0002094,GO:0003674,GO:0003824,GO:0004659,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006066,GO:0006629,GO:0006720,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016093,GO:0016094,GO:0016740,GO:0016765,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046165,GO:0071704,GO:1901576,GO:1901615,GO:1901617 2.5.1.31 0.000000000000000000000000000000000000000000000000000000000000000000001675 240.0
BYDH3_k127_1475513_1 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 GO:0002181,GO:0002184,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043021,GO:0043023,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0044877,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000692 189.0
BYDH3_k127_1475513_2 Belongs to the CDS family K00981 - 2.7.7.41 0.000000000000000000000000000000000000000000192 168.0
BYDH3_k127_1475513_3 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 GO:0002094,GO:0003674,GO:0003824,GO:0004659,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006066,GO:0006629,GO:0006720,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016093,GO:0016094,GO:0016740,GO:0016765,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046165,GO:0071704,GO:1901576,GO:1901615,GO:1901617 2.5.1.31 0.00000000008004 63.0
BYDH3_k127_1490300_0 ABC transporter K11085 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002254 369.0
BYDH3_k127_1490300_1 YGGT family K02221 - - 0.0000000000000000000000000000000008932 132.0
BYDH3_k127_1490300_2 - - - - 0.000000000000000000002766 96.0
BYDH3_k127_1490300_3 PFAM permease YjgP YjgQ family protein K11720 - - 0.00000000000004535 74.0
BYDH3_k127_1490300_4 DUF167 K09131 - - 0.00000000000008086 74.0
BYDH3_k127_1492060_0 PFAM Aminotransferase class I and II K11358 - 2.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001294 477.0
BYDH3_k127_1492060_1 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis K21071 - 2.7.1.11,2.7.1.90 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002273 394.0
BYDH3_k127_1506038_0 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008987 401.0
BYDH3_k127_1506038_1 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.00000000000000000000000000000000000000000000000000000000000000000001753 239.0
BYDH3_k127_1506038_2 Hydrophobe Amphiphile Efflux-1 (HAE1) Family K18138 - - 0.00000000000000000000000000000000000000000000000000000000000000004652 226.0
BYDH3_k127_1506038_3 PFAM response regulator receiver - - - 0.000000000000000000000000000000000000000000000000000000002081 203.0
BYDH3_k127_1506038_4 PFAM Type IV pilus assembly PilZ - - - 0.00000000000000000001531 96.0
BYDH3_k127_1536626_0 histidine kinase A domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007183 370.0
BYDH3_k127_1554111_0 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 8.187e-205 650.0
BYDH3_k127_1554111_1 Mur ligase, middle domain K11754 - 6.3.2.12,6.3.2.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001208 386.0
BYDH3_k127_1554111_2 UvrD-like helicase C-terminal domain K03657 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001022 353.0
BYDH3_k127_1554111_3 PFAM UvrD REP helicase K03657 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003125 291.0
BYDH3_k127_1554111_4 Radical SAM superfamily K04070 - 1.97.1.4 0.000000000000000000000000173 110.0
BYDH3_k127_1591790_0 PFAM 2Fe-2S iron-sulfur cluster binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000418 338.0
BYDH3_k127_1607582_0 DNA helicase K03657 - 3.6.4.12 1.15e-264 850.0
BYDH3_k127_1607582_1 Domain of unknown function (DUF4870) - - - 0.00000000000000000000000000000000532 130.0
BYDH3_k127_1637982_0 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001179 423.0
BYDH3_k127_1637982_1 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237,GO:0050515 2.7.1.148 0.00000000000000000000000000000000000000000000000000000000000000000000005532 250.0
BYDH3_k127_1637982_2 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic K00058 - 1.1.1.399,1.1.1.95 0.000000000000000000000000002261 113.0
BYDH3_k127_1637982_3 Domain of unknown function (DUF1844) - - - 0.00000000000000000000001388 105.0
BYDH3_k127_1639332_0 FAD dependent oxidoreductase K00244 - 1.3.5.4 0.000000000000000000006394 100.0
BYDH3_k127_1639332_1 succinate dehydrogenase K13796 - - 0.000000001862 68.0
BYDH3_k127_1695118_0 PFAM Formate--tetrahydrofolate ligase K01938 - 6.3.4.3 7.321e-305 939.0
BYDH3_k127_1695118_1 Belongs to the thiolase family K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000008956 241.0
BYDH3_k127_1695532_0 Sigma-54 interaction domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001027 464.0
BYDH3_k127_1695532_1 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate K00147 - 1.2.1.41 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007294 335.0
BYDH3_k127_1695532_2 PFAM peptidase - - - 0.00000000000000000000000000000000000000000000000000000000000002147 232.0
BYDH3_k127_1695532_3 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 GO:0000309,GO:0003674,GO:0003824,GO:0004515,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.7.18 0.000000000000000000000000000000000000000000000000001186 190.0
BYDH3_k127_1695532_4 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.0000000000000000000000000004056 117.0
BYDH3_k127_1695532_5 peptidyl-tyrosine sulfation - - - 0.00000000000000000168 95.0
BYDH3_k127_1728907_0 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 GO:0003674,GO:0003824,GO:0004045,GO:0016787,GO:0016788,GO:0052689,GO:0140098,GO:0140101 3.1.1.29 0.0000000000000000000000000000000000000000000000000001168 192.0
BYDH3_k127_1728907_1 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 - - 0.0000000000000000000000000000000000004067 147.0
BYDH3_k127_1733692_0 ABC-type branched-chain amino acid transport systems, periplasmic component K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006097 540.0
BYDH3_k127_1733692_1 DUF35 OB-fold domain, acyl-CoA-associated K07068 - - 0.00000000000000811 79.0
BYDH3_k127_177957_0 PFAM fumarate reductase succinate dehydrogenase flavoprotein domain protein K00244 - 1.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000003066 246.0
BYDH3_k127_177957_1 SnoaL-like domain - - - 0.00000000000000000000000000000005027 135.0
BYDH3_k127_1786752_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000007392 258.0
BYDH3_k127_1786752_1 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.000000000000000000000000000000000000000000000294 176.0
BYDH3_k127_1786752_3 cellulase activity - - - 0.00000000000003667 86.0
BYDH3_k127_1786752_4 Belongs to the peptidase S8 family - - - 0.0000000000002589 83.0
BYDH3_k127_1786752_5 Sulfate transporter antisigma-factor antagonist STAS K03321 - - 0.00000002248 56.0
BYDH3_k127_1793834_0 CRS1_YhbY K07574 - - 0.00000000000000000000000000000007862 126.0
BYDH3_k127_1793834_1 cell redox homeostasis K12267,K22278 - 1.8.4.11,1.8.4.12,3.5.1.104 0.000000000000000000000006692 113.0
BYDH3_k127_1793834_2 The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. The AddB nuclease domain is not required for chi fragment generation K16899 - 3.6.4.12 0.0000000000005349 82.0
BYDH3_k127_1811707_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001689 377.0
BYDH3_k127_1811707_1 NADH:flavin oxidoreductase / NADH oxidase family - - - 0.000000000000000000000000000000000000000000000000000000001821 214.0
BYDH3_k127_1843561_0 HlyD family secretion protein K02005 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003057 340.0
BYDH3_k127_1843561_1 PFAM ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009744 327.0
BYDH3_k127_1843561_2 MacB-like periplasmic core domain K02004 - - 0.00000000000003782 73.0
BYDH3_k127_1847896_0 MMPL family K07003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005539 328.0
BYDH3_k127_1847896_1 PFAM thioesterase superfamily K07107 - - 0.000000000000000000000000000000000000000000000000000000000001343 212.0
BYDH3_k127_1847896_2 Belongs to the beta-ketoacyl-ACP synthases family K00647,K09458 - 2.3.1.179,2.3.1.41 0.00000000000000000000000000000000000000005488 157.0
BYDH3_k127_1847896_3 PFAM Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA FabZ K02372 - 4.2.1.59 0.000000000000000000003711 98.0
BYDH3_k127_1860111_0 TonB dependent receptor K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000446 243.0
BYDH3_k127_1860111_1 SnoaL-like domain - - - 0.000000000000000000000000000000000007067 149.0
BYDH3_k127_1895952_0 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 - - 1.582e-249 784.0
BYDH3_k127_1895952_1 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 - 2.7.4.25 0.0000000000000000000000000000000000000000000000000000000000001597 218.0
BYDH3_k127_1895952_2 signal peptide peptidase SppA K04773 - - 0.0000000000000000000000000000000000000000000005029 172.0
BYDH3_k127_1898131_0 Class II release factor RF3, C-terminal domain K02837 GO:0003674,GO:0003676,GO:0003723,GO:0003747,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0016150,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 7.3e-281 869.0
BYDH3_k127_1910732_0 CO dehydrogenase acetyl-CoA synthase delta subunit K00197 - 2.1.1.245 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002795 486.0
BYDH3_k127_1910732_1 PFAM dihydropteroate synthase DHPS K15023 - 2.1.1.258 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001225 409.0
BYDH3_k127_1910732_2 peptidase C14 caspase catalytic subunit p20 - - - 0.0000000000000008313 79.0
BYDH3_k127_1912202_0 3'-to-5' exoribonuclease specific for small oligoribonucleotides K13288 - - 0.00000000000000000000000000000000000000000000000000000000000001356 219.0
BYDH3_k127_1912202_1 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000000000001017 144.0
BYDH3_k127_1920036_0 Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family K07402 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005356 290.0
BYDH3_k127_1920036_1 Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family K11717 - 2.8.1.7,4.4.1.16 0.000000000000000000000000000000000005066 143.0
BYDH3_k127_1959845_0 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003239 336.0
BYDH3_k127_1959845_1 COGs COG1053 Succinate dehydrogenase fumarate reductase flavoprotein subunit K00244 - 1.3.5.4 0.00000000000000001574 89.0
BYDH3_k127_1959845_2 Belongs to the glycosyl hydrolase 5 (cellulase A) family - - - 0.000002067 55.0
BYDH3_k127_1970715_0 Patatin-like phospholipase K07001 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007021 279.0
BYDH3_k127_1970715_1 PFAM fumarate reductase succinate dehydrogenase flavoprotein domain protein K00244 - 1.3.5.4 0.00000000000000000000000000000000000000000003615 181.0
BYDH3_k127_1970715_2 NnrU protein - - - 0.0000000000000000000007445 97.0
BYDH3_k127_1970715_3 methyltransferase activity - - - 0.000885 46.0
BYDH3_k127_201003_0 PFAM 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K00074 - 1.1.1.157 0.00000000000000000000000000000000000000000000000000000000000000000000000002667 260.0
BYDH3_k127_201003_1 Belongs to the enoyl-CoA hydratase isomerase family K01692,K01715 - 4.2.1.17 0.00000000000000000000000000000000000000000000001658 178.0
BYDH3_k127_2010677_0 Beta-lactamase superfamily domain K00784 - 3.1.26.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007427 394.0
BYDH3_k127_2010677_1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 GO:0005575,GO:0005622,GO:0005623,GO:0006950,GO:0006974,GO:0008150,GO:0009380,GO:0009987,GO:0032991,GO:0033554,GO:0044424,GO:0044464,GO:0050896,GO:0051716,GO:1902494,GO:1905347,GO:1905348,GO:1990391 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005619 310.0
BYDH3_k127_2010677_2 PFAM PpiC-type peptidyl-prolyl cis-trans isomerase K03770 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007002 318.0
BYDH3_k127_2010677_3 PFAM PpiC-type peptidyl-prolyl cis-trans isomerase K03770 - 5.2.1.8 0.000004154 53.0
BYDH3_k127_2015315_0 metal-dependent phosphohydrolase 7TM intracellular region K07037 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001659 590.0
BYDH3_k127_2015315_1 PFAM PhoH family protein K06217 - - 0.0000000000000000000000000000000000000000000000000000000000006117 212.0
BYDH3_k127_2015315_2 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.000000002296 62.0
BYDH3_k127_2023276_0 Carboxylesterase family - - - 0.000000000000000000000000000000000000000000000000000001158 203.0
BYDH3_k127_2023276_1 COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases K00008,K00121 - 1.1.1.1,1.1.1.14,1.1.1.284 0.000000000000000000000000000000000000000000000000001151 193.0
BYDH3_k127_2039134_0 Type II secretion system (T2SS), protein K - - - 0.00000000000000000000000000000000004924 149.0
BYDH3_k127_2046232_0 NADH ubiquinone oxidoreductase NADH-binding (51 kD) subunit K00335,K18331 - 1.12.1.3,1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007299 301.0
BYDH3_k127_2046232_1 Respiratory-chain NADH dehydrogenase domain 51 kDa subunit K00124,K00335,K05587,K18331 - 1.12.1.3,1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002978 277.0
BYDH3_k127_2046232_2 indolepyruvate ferredoxin oxidoreductase activity K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.0000000000000000000000000000000000000000000000000000000000000000000008801 244.0
BYDH3_k127_2084908_0 Glyoxalase bleomycin resistance protein dioxygenase K06996 - - 0.000000000000000000000000000000000001418 142.0
BYDH3_k127_2084908_2 PFAM NADPH-dependent FMN reductase - - - 0.00000001487 56.0
BYDH3_k127_2101825_0 HDOD domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001965 258.0
BYDH3_k127_2101825_1 AraC-like ligand binding domain - - - 0.00000000000000000000000000000000000008069 147.0
BYDH3_k127_2101825_2 HDOD domain - - - 0.00000000000000000000000000000000005322 145.0
BYDH3_k127_2101825_3 Histidine kinase - - - 0.0000000000000000000000000000004955 130.0
BYDH3_k127_2113120_0 glutamine-fructose-6-phosphate transaminase (isomerizing) activity K00820 GO:0003674,GO:0003824,GO:0004360,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006002,GO:0006040,GO:0006047,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0016740,GO:0016769,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.6.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001735 359.0
BYDH3_k127_2113120_1 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003666 338.0
BYDH3_k127_2113120_2 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 GO:0003674,GO:0003824,GO:0004360,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006002,GO:0006040,GO:0006047,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0016740,GO:0016769,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.6.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007296 324.0
BYDH3_k127_2135743_0 NADH flavin oxidoreductase NADH oxidase - - - 0.0000000000000000000000000000000000000000000000002601 186.0
BYDH3_k127_2181971_0 von Willebrand factor type A domain K07114 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007895 587.0
BYDH3_k127_2181971_1 Energy transducer TonB K03832 - - 0.00001502 48.0
BYDH3_k127_2199129_0 ABC transporter K06147 - - 1.399e-248 787.0
BYDH3_k127_2199129_1 Uncharacterised protein family UPF0047 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004045 270.0
BYDH3_k127_2199129_2 Sulfate permease family K03321 - - 0.0000000000000000000000000000000000000000000000000000000000000851 223.0
BYDH3_k127_2199129_3 ABC transporter transmembrane region K06147 - - 0.000000000004794 68.0
BYDH3_k127_2209663_0 RNA-metabolising metallo-beta-lactamase K07576 - - 1.565e-221 698.0
BYDH3_k127_2209663_1 PFAM Pyridoxal-dependent decarboxylase K01580 - 4.1.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004693 595.0
BYDH3_k127_2209663_2 TIGRFAM lysine 2,3-aminomutase YodO family protein K01843 - 5.4.3.2 0.000000000000000000000000000000000000000000000000002666 184.0
BYDH3_k127_2239927_0 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004103 301.0
BYDH3_k127_2239927_1 L,D-transpeptidase catalytic domain - - - 0.000000000000000000000000000000000000000000001228 175.0
BYDH3_k127_2270591_0 Cysteine-rich domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002764 473.0
BYDH3_k127_2270591_1 Fad-dependent pyridine nucleotide-disulfide oxidoreductase K17218 - 1.8.5.4 0.000000000000000000000000000000000000000000000000000003873 193.0
BYDH3_k127_2270591_2 Putative redox-active protein (C_GCAxxG_C_C) - - - 0.000000000000000000000000000000000000004592 150.0
BYDH3_k127_2270591_3 FAD linked oxidases, C-terminal domain K00104 - 1.1.3.15 0.00000000000000000000000000000003532 128.0
BYDH3_k127_2279611_0 PFAM 3-Oxoacyl- acyl-carrier-protein (ACP) synthase III - - - 0.0000000000000000000000000000000000000000000000000000000000000006628 228.0
BYDH3_k127_2279611_1 Protein of unknown function (DUF1571) - - - 0.00000000000000006566 88.0
BYDH3_k127_2280506_0 FAD binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003585 560.0
BYDH3_k127_2280506_1 succinate dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001027 320.0
BYDH3_k127_2280506_2 Flavodoxin domain - - - 0.00000000000000000000000000000000000000000000936 178.0
BYDH3_k127_2285012_0 TonB-dependent Receptor Plug K02014 - - 0.00000000000000000000000000000000000000000000000000000001709 219.0
BYDH3_k127_2285012_1 N-terminal half of MaoC dehydratase - - - 0.0000000000000000001025 102.0
BYDH3_k127_2289490_0 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 GO:0003674,GO:0003824,GO:0006732,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0018130,GO:0019538,GO:0019637,GO:0019720,GO:0043170,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0046483,GO:0051186,GO:0051188,GO:0051189,GO:0071704,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.99.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004045 351.0
BYDH3_k127_2289490_1 nucleic acid binding K03698 - - 0.0000000000000000000000000000000000000000000000000000000000000000002376 236.0
BYDH3_k127_2289490_2 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 GO:0002682,GO:0002684,GO:0005575,GO:0005623,GO:0005886,GO:0006950,GO:0008150,GO:0009605,GO:0009607,GO:0016020,GO:0035821,GO:0043207,GO:0044003,GO:0044403,GO:0044419,GO:0044464,GO:0048518,GO:0048583,GO:0048584,GO:0050776,GO:0050778,GO:0050789,GO:0050896,GO:0051409,GO:0051701,GO:0051704,GO:0051707,GO:0051817,GO:0052031,GO:0052173,GO:0052200,GO:0052255,GO:0052552,GO:0052553,GO:0052555,GO:0052556,GO:0052564,GO:0052572,GO:0065007,GO:0071944,GO:0075136 - 0.0000005895 58.0
BYDH3_k127_2303378_0 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001847 445.0
BYDH3_k127_2303378_1 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.5.1.75 0.00000000000000000000000000000000000000000000000000000000000002421 221.0
BYDH3_k127_2303378_2 Zinc dependent phospholipase C - - - 0.00000000000000000000000000000000000000000001809 176.0
BYDH3_k127_2303378_3 RadC-like JAB domain K03630 - - 0.0000000000000000000000000000000226 130.0
BYDH3_k127_2310655_0 Pyruvate phosphate dikinase, PEP K01006 - 2.7.9.1 7.734e-234 745.0
BYDH3_k127_2326109_0 PFAM Radical SAM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009478 321.0
BYDH3_k127_2326109_1 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.00000000000000000000000009302 114.0
BYDH3_k127_2396048_0 Molydopterin dinucleotide binding domain K07306,K07812 - 1.7.2.3,1.8.5.3 5.43e-322 1004.0
BYDH3_k127_2398877_0 Belongs to the SIS family. GutQ KpsF subfamily K06041 - 5.3.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006635 345.0
BYDH3_k127_2398877_1 COG1506 Dipeptidyl aminopeptidases acylaminoacyl-peptidases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009721 343.0
BYDH3_k127_2398877_2 Nitroreductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002161 290.0
BYDH3_k127_2398877_3 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000002184 121.0
BYDH3_k127_2398877_4 Dihydrodipicolinate synthetase family K01714,K22397 - 4.1.2.28,4.3.3.7 0.0000000003368 71.0
BYDH3_k127_2398877_5 Thioesterase-like superfamily K01075 - 3.1.2.23 0.00000001634 57.0
BYDH3_k127_2398877_6 - - - - 0.0003898 47.0
BYDH3_k127_2400918_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003873 525.0
BYDH3_k127_2400918_1 prohibitin homologues - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003807 407.0
BYDH3_k127_2400918_2 NfeD-like C-terminal, partner-binding - - - 0.000000000000004033 79.0
BYDH3_k127_2419527_0 PFAM EAL domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001954 395.0
BYDH3_k127_2419527_1 COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon K00966,K16881 - 2.7.7.13,5.4.2.8 0.0000001457 57.0
BYDH3_k127_2452231_0 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005644 337.0
BYDH3_k127_2452231_1 regulation of bacterial-type flagellum-dependent cell motility by regulation of motor speed - - - 0.0000000000001899 79.0
BYDH3_k127_2480949_0 PFAM Cyclic nucleotide-binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000116 245.0
BYDH3_k127_2480949_1 Gtr1/RagA G protein conserved region K06883 GO:0008150,GO:0032879,GO:0032880,GO:0050789,GO:0065007 - 0.00000000000000000000000000000000000000000000000000000000000002418 217.0
BYDH3_k127_2480949_2 COG1975 Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family K07402 - - 0.00000000000004248 79.0
BYDH3_k127_2480949_3 PFAM Cyclic nucleotide-binding - - - 0.0000355 46.0
BYDH3_k127_2489032_0 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002035 608.0
BYDH3_k127_2489032_1 epimerase dehydratase family K01784,K08679 - 5.1.3.2,5.1.3.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001317 464.0
BYDH3_k127_2497244_0 4-hydroxyphenylacetate 3-hydroxylase C terminal K00483,K14534 - 1.14.14.9,4.2.1.120,5.3.3.3 4.842e-248 773.0
BYDH3_k127_2497244_1 Histidine kinase-like ATPases K02482 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002193 365.0
BYDH3_k127_2497244_2 PFAM acyl-CoA dehydrogenase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002876 354.0
BYDH3_k127_2497244_3 cheY-homologous receiver domain - - - 0.00000000000000000000000000000000000000000000000000000001326 205.0
BYDH3_k127_2497244_4 Acyl-CoA dehydrogenase, N-terminal domain - - - 0.0000000000000000000000000000004559 124.0
BYDH3_k127_2497244_5 EF-hand domain pair - - - 0.000005297 53.0
BYDH3_k127_2545328_0 Flagellar basal body rod K02392 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000931 331.0
BYDH3_k127_2545328_1 basal body rod protein K02391,K02392 - - 0.00000000000000000000000000000000000000000000000000008325 195.0
BYDH3_k127_2545328_2 FhlB domain-containing protein K04061 - - 0.000000000000000000000007359 104.0
BYDH3_k127_2545328_3 Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P-ring assembly K02386 - - 0.000008384 54.0
BYDH3_k127_255415_0 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007721 342.0
BYDH3_k127_255415_1 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.00000000000000000000000000000000003207 136.0
BYDH3_k127_255415_2 AsmA-like C-terminal region - - - 0.0000000000000000000002067 100.0
BYDH3_k127_255415_3 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.000000000000002778 86.0
BYDH3_k127_2555173_0 FAD binding domain - - - 0.000000000000000000000000004258 113.0
BYDH3_k127_2569312_0 NADH:flavin oxidoreductase / NADH oxidase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009685 504.0
BYDH3_k127_2569312_1 Thiolase, C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006059 291.0
BYDH3_k127_2569312_2 Major facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000003699 235.0
BYDH3_k127_2569312_3 Major Facilitator Superfamily - - - 0.000000000000000000000000000000496 131.0
BYDH3_k127_2569312_4 Major Facilitator Superfamily - - - 0.000000000000000000000000000001566 128.0
BYDH3_k127_2569312_5 Enoyl-CoA hydratase/isomerase K20765 - 3.7.1.18 0.00000000000000000000000009068 111.0
BYDH3_k127_2569312_6 PFAM Glyoxalase bleomycin resistance protein dioxygenase K05606 - 5.1.99.1 0.00000000000000000000001765 105.0
BYDH3_k127_2588931_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 0.0 1168.0
BYDH3_k127_2605884_0 FAD binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003117 377.0
BYDH3_k127_2605884_1 SnoaL-like domain - - - 0.000000000000000000000006824 109.0
BYDH3_k127_2605884_2 FAD binding domain - - - 0.0000000000002097 75.0
BYDH3_k127_2605884_3 Outer membrane receptor K02014 - - 0.0000000001132 72.0
BYDH3_k127_2610828_0 Short chain fatty acid transporter K02106 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002145 406.0
BYDH3_k127_2610828_1 - - - - 0.0000000000000000006671 91.0
BYDH3_k127_2610828_2 - - - - 0.00000000000000308 79.0
BYDH3_k127_2610828_3 YtxH-like protein - - - 0.000000000000007758 76.0
BYDH3_k127_2617682_0 Pyridine nucleotide-disulphide oxidoreductase K00362 - 1.7.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004489 416.0
BYDH3_k127_2617682_1 L-seryl-tRNASec selenium transferase activity K01042 GO:0003674,GO:0003824,GO:0004125,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009059,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016070,GO:0016259,GO:0016260,GO:0016740,GO:0016785,GO:0018130,GO:0019438,GO:0019752,GO:0019842,GO:0030170,GO:0032774,GO:0034641,GO:0034654,GO:0034660,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0048037,GO:0050662,GO:0070279,GO:0071704,GO:0090304,GO:0097056,GO:0097159,GO:0140098,GO:0140101,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.9.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001414 377.0
BYDH3_k127_2617682_2 Elongation factor SelB winged helix 3 K03833 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001787 289.0
BYDH3_k127_2617682_3 Belongs to the peptidase S16 family K01338,K04076,K04770 - 3.4.21.53 0.0000000000000000000000000000000000988 137.0
BYDH3_k127_2617682_4 2-hydroxyglutaryl-CoA dehydratase, D-component - - - 0.000005206 49.0
BYDH3_k127_2628051_0 ATP-dependent DNA helicase RecQ K03169 - 5.99.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000119 466.0
BYDH3_k127_2628051_1 Cleaves the N-terminal amino acid of tripeptides K01258 - 3.4.11.4 0.000000000000000000000000000000000000000000000000000000000000001009 224.0
BYDH3_k127_2631964_0 Anthranilate synthase component I domain protein K01665 - 2.6.1.85 9.059e-253 796.0
BYDH3_k127_2631964_1 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases - - - 0.00003438 51.0
BYDH3_k127_2636716_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen K01937 - 6.3.4.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003078 616.0
BYDH3_k127_2636716_1 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.0000000000000000000009247 96.0
BYDH3_k127_2636716_2 response regulator K02485,K03413 - - 0.0000000000000000002808 92.0
BYDH3_k127_2641794_0 Acts as a magnesium transporter K06213 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001815 361.0
BYDH3_k127_2641794_1 PFAM Rubrerythrin - - - 0.0000000000000000000000000000000000000000000000000000000000000000001523 233.0
BYDH3_k127_2681632_0 FAD binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002954 390.0
BYDH3_k127_2681632_1 - - - - 0.00000000000000005932 85.0
BYDH3_k127_2700881_0 PFAM sigma-54 factor interaction domain-containing protein K02584 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001375 592.0
BYDH3_k127_2712998_0 Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system K02017 - 3.6.3.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001255 429.0
BYDH3_k127_2712998_1 PFAM Binding-protein-dependent transport system inner membrane component K02018 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006204 324.0
BYDH3_k127_2712998_2 Bacterial extracellular solute-binding protein K02020 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002467 279.0
BYDH3_k127_2712998_3 Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2 ), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor- dependent enzymes K09121 - 4.99.1.12 0.00000000000000005256 84.0
BYDH3_k127_2712998_4 MobA-Related Protein K02019,K05772,K07141 - 2.7.7.76 0.000000000003819 71.0
BYDH3_k127_2713830_0 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007027 517.0
BYDH3_k127_2713830_1 Alcohol dehydrogenase GroES-like domain K00008 - 1.1.1.14 0.0000000000000000000000000000000001804 138.0
BYDH3_k127_2756477_0 Bacterial type II and III secretion system protein K12282 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007896 504.0
BYDH3_k127_2756477_1 Prokaryotic N-terminal methylation motif - - - 0.00000000000000000000000001428 114.0
BYDH3_k127_2773830_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit K02117 - 3.6.3.14,3.6.3.15 1.462e-221 703.0
BYDH3_k127_2773830_1 ATP synthase, subunit C K02124 - - 0.00000000000000000008286 94.0
BYDH3_k127_2773830_2 Belongs to the V-ATPase 116 kDa subunit family K02123 - - 0.0000000000000000002121 90.0
BYDH3_k127_2773830_3 Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal beta chain is a regulatory subunit K02118 - - 0.0000000000002741 71.0
BYDH3_k127_2773830_4 ATP synthase (E/31 kDa) subunit - - - 0.000004329 57.0
BYDH3_k127_2773830_5 ATP synthase K02122 - - 0.0001569 48.0
BYDH3_k127_2787473_0 - - - - 0.00000001428 62.0
BYDH3_k127_2787473_1 - - - - 0.00000003705 60.0
BYDH3_k127_2787473_2 Flavodoxin domain - - - 0.00001898 55.0
BYDH3_k127_2794707_0 PFAM ribonuclease II K01147,K12573 - 3.1.13.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004257 427.0
BYDH3_k127_2794707_1 Carboxypeptidase controlling helical cell shape catalytic - - - 0.0000000000000000000519 98.0
BYDH3_k127_2794707_2 Phosphotransferase enzyme family - - - 0.000000000000001719 81.0
BYDH3_k127_2794707_3 Phosphotransferase enzyme family K07102 - 2.7.1.221 0.000000000405 62.0
BYDH3_k127_2800657_0 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003133 332.0
BYDH3_k127_2800657_1 PFAM aminotransferase, class IV K00826 - 2.6.1.42 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004435 306.0
BYDH3_k127_2800657_2 Serine/threonine phosphatases, family 2C, catalytic domain K01090 - 3.1.3.16 0.000000000000000000000000000000000000000000000000000009454 199.0
BYDH3_k127_2800657_3 Protein of unknown function (DUF1178) - - - 0.000000000000000000000000000000000003454 141.0
BYDH3_k127_2800657_4 Belongs to the LOG family K06966 - 3.2.2.10 0.00000000000000000000000000000000003482 136.0
BYDH3_k127_2800657_5 signal transduction protein containing a membrane domain, an EAL and a GGDEF domain - - - 0.000000000000000000002663 106.0
BYDH3_k127_281795_0 NADH:flavin oxidoreductase / NADH oxidase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004517 355.0
BYDH3_k127_2855681_0 cation diffusion facilitator family transporter K16264 GO:0000041,GO:0003674,GO:0005215,GO:0005385,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006829,GO:0008150,GO:0008324,GO:0015075,GO:0015318,GO:0016020,GO:0022857,GO:0022890,GO:0030001,GO:0034220,GO:0044464,GO:0046873,GO:0046915,GO:0051179,GO:0051234,GO:0055085,GO:0070838,GO:0071577,GO:0071944,GO:0072509,GO:0072511,GO:0098655,GO:0098660,GO:0098662 - 0.000000000000000000000000000000000000000000000000000000001739 208.0
BYDH3_k127_2855681_1 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.00000000000000000007367 91.0
BYDH3_k127_2855681_2 PFAM methyl-viologen-reducing hydrogenase delta subunit - - - 0.0000000000000000002164 89.0
BYDH3_k127_2855681_3 PFAM methyl-viologen-reducing hydrogenase delta subunit - - - 0.00000000000000001788 82.0
BYDH3_k127_2855681_4 - - - - 0.0000000002006 66.0
BYDH3_k127_2887154_0 lipopolysaccharide K03275,K03276,K03278,K03279 GO:0000271,GO:0003674,GO:0003824,GO:0005975,GO:0005976,GO:0006629,GO:0008150,GO:0008152,GO:0008194,GO:0008610,GO:0008653,GO:0009058,GO:0009059,GO:0009103,GO:0009244,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016740,GO:0016757,GO:0016758,GO:0033692,GO:0034637,GO:0034645,GO:0035251,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0046401,GO:0046527,GO:0047270,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 2.4.1.44,2.4.1.58 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007273 334.0
BYDH3_k127_2887154_1 O-methyltransferase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001543 257.0
BYDH3_k127_2887154_2 Methyltransferase domain - - - 0.000002219 50.0
BYDH3_k127_290119_0 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 GO:0003674,GO:0003824,GO:0003909,GO:0003911,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016874,GO:0016886,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 6.5.1.2 0.0000000000000000000000000000000001832 136.0
BYDH3_k127_290119_1 GDSL-like Lipase/Acylhydrolase - - - 0.0000000000000000000000001491 115.0
BYDH3_k127_290119_2 Acylphosphatase K01512 - 3.6.1.7 0.0000000000000000000000007363 107.0
BYDH3_k127_2912757_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 5.868e-195 625.0
BYDH3_k127_2912757_1 Domain of unknown function (DUF362) - - - 0.0000000000000000000000000000000000000000000000000002701 191.0
BYDH3_k127_293861_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 2.325e-203 649.0
BYDH3_k127_293861_1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 GO:0005575,GO:0005622,GO:0005623,GO:0006950,GO:0006974,GO:0008150,GO:0009380,GO:0009987,GO:0032991,GO:0033554,GO:0044424,GO:0044464,GO:0050896,GO:0051716,GO:1902494,GO:1905347,GO:1905348,GO:1990391 - 0.0000000000000000000000000000000000000000000000000000000000000000005601 240.0
BYDH3_k127_293861_2 PFAM peptidase - - - 0.00000000000000000000000000000000000000000000000000000000000001374 227.0
BYDH3_k127_2950850_0 Phosphate acyltransferases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007487 376.0
BYDH3_k127_2950850_1 CBS domain containing protein K06189 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005041 261.0
BYDH3_k127_2950850_2 Beta propeller domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000153 262.0
BYDH3_k127_2950850_3 PFAM Transglycosylase SLT domain K08309 - - 0.000000000000000000000000000000000001199 142.0
BYDH3_k127_2966074_0 UDP-N-acetylmuramate-L-alanine ligase activity K01924 - 6.3.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002189 307.0
BYDH3_k127_2966074_1 cell wall formation K00075 - 1.3.1.98 0.00000000000000000000000000000000000000000000000000000000000000000002689 243.0
BYDH3_k127_2970612_0 PFAM NAD-dependent epimerase dehydratase K08678 - 4.1.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002164 507.0
BYDH3_k127_2970612_1 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal K00099 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006721,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016114,GO:0016491,GO:0016614,GO:0016616,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0030145,GO:0030604,GO:0032787,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046490,GO:0046872,GO:0046914,GO:0048037,GO:0050661,GO:0050662,GO:0051483,GO:0051484,GO:0055114,GO:0070402,GO:0071704,GO:0090407,GO:0097159,GO:1901135,GO:1901265,GO:1901363,GO:1901576 1.1.1.267 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007806 443.0
BYDH3_k127_2982039_0 succinate dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003353 392.0
BYDH3_k127_2982039_1 succinate dehydrogenase K00244 - 1.3.5.4 0.00000000000000000000000000000000000000000002123 181.0
BYDH3_k127_2990689_0 NADH flavin oxidoreductase NADH oxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002201 296.0
BYDH3_k127_2990689_1 SMP-30 Gluconolaconase LRE-like K01053 - 3.1.1.17 0.000000000000000000000000000000000000000000000002849 184.0
BYDH3_k127_2990689_2 GCN5-related N-acetyl-transferase K06975 - - 0.0000000000000000004385 89.0
BYDH3_k127_3012175_0 PFAM Pterin binding enzyme K00548 - 2.1.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000641 392.0
BYDH3_k127_3012175_1 Domain of unknown function (DUF4445) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000135 400.0
BYDH3_k127_3012175_2 Uroporphyrinogen decarboxylase (URO-D) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001591 291.0
BYDH3_k127_3012175_3 Protein of unknown function (DUF1638) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000007961 245.0
BYDH3_k127_3012175_4 methionine synthase K00548 - 2.1.1.13 0.00000000000000000000000000000000000000000000000000000000000000001734 229.0
BYDH3_k127_3012175_5 SnoaL-like domain - - - 0.0000000000000000000000000000000004461 139.0
BYDH3_k127_3051495_0 Cupin 2, conserved barrel domain protein - - - 0.000008509 57.0
BYDH3_k127_3057666_0 4 iron, 4 sulfur cluster binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001753 439.0
BYDH3_k127_3057666_1 Cation transporter/ATPase, N-terminus K01537 - 3.6.3.8 0.0000000000000000000000000000000000000000000000000000000006416 204.0
BYDH3_k127_3057666_2 Cation transport ATPase (P-type) K01537 - 3.6.3.8 0.0000000000000000000000003034 104.0
BYDH3_k127_3057666_3 CoA-substrate-specific enzyme activase - - - 0.000158 44.0
BYDH3_k127_3063080_0 PFAM ABC transporter K06861 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001709 318.0
BYDH3_k127_3063080_1 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family K03270 - 3.1.3.45 0.000000000000000000000000000000000000000000000000009735 186.0
BYDH3_k127_3063080_2 3-deoxy-D-manno-octulosonic acid 8-phosphate synthase K01627 - 2.5.1.55 0.00000000000000000000000000000000000000002185 154.0
BYDH3_k127_3063080_3 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03092 - - 0.000000000000000000004102 96.0
BYDH3_k127_3063080_4 Lipopolysaccharide-assembly, LptC-related - - - 0.0000000001306 69.0
BYDH3_k127_3063080_5 OstA-like protein K09774 - - 0.00000001608 63.0
BYDH3_k127_309382_0 Protein involved in receptor activity and transport K02014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000129 341.0
BYDH3_k127_309382_1 PFAM fumarate reductase succinate dehydrogenase flavoprotein domain protein K13796 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003691 284.0
BYDH3_k127_309382_2 PFAM sigma-54 factor interaction domain-containing protein - - - 0.0000000000000000000000000000000000000000000002967 189.0
BYDH3_k127_3098451_0 Aldehyde oxidase and xanthine dehydrogenase, a b hammerhead K11177 - 1.17.1.4 1.754e-202 644.0
BYDH3_k127_3114075_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009017 311.0
BYDH3_k127_3114075_1 PFAM ABC transporter substrate binding protein K01989 - - 0.0000000000000000000000000000001309 137.0
BYDH3_k127_3114075_2 ABC transporter substrate binding protein K01989 - - 0.000000000000000000078 99.0
BYDH3_k127_3122609_0 Evidence 4 Homologs of previously reported genes of - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003601 352.0
BYDH3_k127_3122609_1 NADPH-dependent FMN reductase - - - 0.00000000000000000000000000000000000000000000000000001877 194.0
BYDH3_k127_3122609_2 FCD - - - 0.00001651 53.0
BYDH3_k127_312287_0 PhoH-like protein K06217 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008703 298.0
BYDH3_k127_312287_1 Uncharacterised protein family UPF0047 - - - 0.0000000000000000000000000000000000000000000000005978 178.0
BYDH3_k127_3127163_0 Serine aminopeptidase, S33 K06889 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003026 336.0
BYDH3_k127_3127163_1 - - - - 0.000000000000000000000000000001983 121.0
BYDH3_k127_3127163_2 - - - - 0.0000000000000000003046 90.0
BYDH3_k127_3139483_0 Transmembrane secretion effector - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001976 541.0
BYDH3_k127_3167871_0 Respiratory-chain NADH dehydrogenase domain 51 kDa subunit K00124,K00335,K00355,K18331 - 1.12.1.3,1.6.5.2,1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001635 357.0
BYDH3_k127_3167871_1 Thioredoxin-like [2Fe-2S] ferredoxin K00334 - 1.6.5.3 0.0000000000000000000000000000002385 128.0
BYDH3_k127_3167871_2 Serine threonine protein phosphatase K01090,K20074 - 3.1.3.16 0.00000000000000001793 96.0
BYDH3_k127_3167871_3 Competence protein ComEA helix-hairpin-helix repeat K02237 - - 0.00000000129 59.0
BYDH3_k127_3180749_0 Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006525 383.0
BYDH3_k127_3180749_1 PBP superfamily domain K05772 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006469 374.0
BYDH3_k127_3180749_2 PFAM binding-protein-dependent transport systems inner membrane component K05773 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003489 293.0
BYDH3_k127_3180749_3 ABC transporter K06857 - 3.6.3.55 0.000000000000000000000000000000000000000000000000000000000000000000000000000004113 272.0
BYDH3_k127_3188815_0 TIGRFAM Sua5 YciO YrdC YwlC family protein K07566 - 2.7.7.87 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005413 282.0
BYDH3_k127_3188815_1 TIGRFAM signal peptide peptidase SppA, 36K type K04773 - - 0.000000000000000000000000000000495 126.0
BYDH3_k127_3193830_0 Anaphase-promoting complex, cyclosome, subunit 3 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005207 281.0
BYDH3_k127_3221451_0 methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001337 397.0
BYDH3_k127_3221451_1 benzoate-CoA ligase K04110 - 6.2.1.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003832 368.0
BYDH3_k127_3221451_2 benzoate-CoA ligase K04110 - 6.2.1.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001562 338.0
BYDH3_k127_3221451_3 Carbamoyl-phosphate synthetase large chain oligomerisation K01955 - 6.3.5.5 0.00000000000000000000176 96.0
BYDH3_k127_3221451_4 Transposase, Mutator family - - - 0.0007066 46.0
BYDH3_k127_3270227_0 Uncharacterized protein conserved in bacteria (DUF2062) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006615 336.0
BYDH3_k127_3270227_1 lipid A biosynthesis acyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006752 334.0
BYDH3_k127_3270227_2 Phosphopantetheine attachment site K02078 - - 0.000000000000000000002285 94.0
BYDH3_k127_3271674_0 COG3901 Regulator of nitric oxide reductase transcription K19339,K19343 - - 6.28e-196 622.0
BYDH3_k127_3271674_1 Domain of unknown function (DUF362) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006475 367.0
BYDH3_k127_3271674_2 PFAM aldo keto reductase K07079 - - 0.00000000000000000000000000000000000000000000003142 176.0
BYDH3_k127_3296251_0 Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) K01626 - 2.5.1.54 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005535 468.0
BYDH3_k127_3296251_1 prephenate dehydrogenase K04517,K14187 - 1.3.1.12,5.4.99.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000001423 264.0
BYDH3_k127_330209_0 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008121 548.0
BYDH3_k127_330209_1 PFAM CMP dCMP deaminase zinc-binding K01493 - 3.5.4.12 0.000000000000000000000000000000000000000000000000000000000000000000004268 237.0
BYDH3_k127_330209_2 ATP cone domain K07738 - - 0.00000000000000000000000000000000000000000000000000000000002011 209.0
BYDH3_k127_3316140_0 Acyl-CoA dehydrogenase, N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000249 385.0
BYDH3_k127_3316140_1 PFAM Electron transfer flavoprotein K03521 - - 0.00000000000000000000000000000000000000000000000000000000000004379 218.0
BYDH3_k127_3320163_0 Pyruvate:ferredoxin oxidoreductase core domain II K00174,K00186 - 1.2.7.11,1.2.7.3,1.2.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003826 479.0
BYDH3_k127_3320163_1 Thioredoxin-like [2Fe-2S] ferredoxin K00334 - 1.6.5.3 0.000000000000000000000000000000000000000000000000001938 188.0
BYDH3_k127_3320163_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00176,K00338 - 1.2.7.3,1.6.5.3 0.000000000000000000000002466 104.0
BYDH3_k127_3320163_3 DRTGG domain protein - - - 0.000000000000000000007278 96.0
BYDH3_k127_3345729_0 TIGRFAM potassium uptake protein, TrkH family K03498 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002394 354.0
BYDH3_k127_3345729_1 PFAM TrkA-N domain K03499 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006498 286.0
BYDH3_k127_336202_0 NADH:flavin oxidoreductase / NADH oxidase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002798 355.0
BYDH3_k127_336202_1 Major facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004318 261.0
BYDH3_k127_336202_2 succinate dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000004229 237.0
BYDH3_k127_336202_3 succinate dehydrogenase - - - 0.000000001964 62.0
BYDH3_k127_3364394_0 Protein of unknown function, DUF255 K06888 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001546 268.0
BYDH3_k127_3364394_1 Conserved protein K01163 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002676 256.0
BYDH3_k127_3364394_2 COGs COG1331 Highly conserved protein containing a thioredoxin domain K06888 - - 0.00000000000000000000000000000000000000005271 152.0
BYDH3_k127_3389436_0 Protein of unknown function (DUF1009) K09949 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001914 308.0
BYDH3_k127_3389436_1 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000439 289.0
BYDH3_k127_3389436_2 Oxidoreductase family, NAD-binding Rossmann fold K09949 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003313 289.0
BYDH3_k127_3389436_3 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 GO:0003674,GO:0005488,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008289,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0019637,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.4.1.182 0.00000000000000000000000000000000000000000000000000000000000000000000000000008749 268.0
BYDH3_k127_3389436_4 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 - 4.2.1.59 0.000000000000000000000000000000000000000000000000002927 185.0
BYDH3_k127_3413035_0 Domain of unknown function (DUF1846) - - - 1.957e-261 812.0
BYDH3_k127_3413035_1 PFAM Metallo-beta-lactamase superfamily K17837 - 3.5.2.6 0.00000000000000000000000000000000000000000000000000000000000000000001016 238.0
BYDH3_k127_3413035_2 conserved protein (DUF2196) - - - 0.0000000000000000000000007016 105.0
BYDH3_k127_342173_0 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006154 530.0
BYDH3_k127_342173_1 Belongs to the MurCDEF family K02558 - 6.3.2.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009301 325.0
BYDH3_k127_3428286_0 Catalyzes the reversible hydration of fumarate to (S)- malate K01676 - 4.2.1.2 5.247e-252 785.0
BYDH3_k127_3433028_0 Beta-ketoacyl synthase, C-terminal domain K09458 - 2.3.1.179 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001016 498.0
BYDH3_k127_3433028_1 PFAM FAD dependent oxidoreductase K09516 - 1.3.99.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000026 290.0
BYDH3_k127_3433028_2 Phospholipid glycerol acyltransferase K00655 - 2.3.1.51 0.00000000000000000000000000000000000000000000000000000000000000000000000001401 258.0
BYDH3_k127_3433028_3 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) - - - 0.000000000000000000000000000000000000000000000000000121 192.0
BYDH3_k127_3433028_4 dehydratase - - - 0.0000000000000000000000000000000000003584 145.0
BYDH3_k127_3433028_5 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.0000000000000000000000001195 108.0
BYDH3_k127_3433028_6 MMPL family K07003 - - 0.000000001919 63.0
BYDH3_k127_3462512_0 PFAM fumarate reductase succinate dehydrogenase flavoprotein domain protein K00244 - 1.3.5.4 0.00000000000000000000000000000000000000000000000000000000000007157 233.0
BYDH3_k127_348457_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 GO:0003674,GO:0003824,GO:0004812,GO:0004823,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006429,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.4 0.0 1140.0
BYDH3_k127_348457_1 TIGRFAM DNA polymerase III, delta subunit K02340 - 2.7.7.7 0.000000000000000000000000000000000000003331 155.0
BYDH3_k127_348457_2 Lipopolysaccharide-assembly - - - 0.00000000001417 72.0
BYDH3_k127_348457_3 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.00000003289 55.0
BYDH3_k127_348457_4 Binds directly to 16S ribosomal RNA K02968 - - 0.00004129 48.0
BYDH3_k127_348457_5 DNA polymerase III, delta subunit K02340 - 2.7.7.7 0.00006767 49.0
BYDH3_k127_3537731_0 PFAM type II secretion system protein E K02454,K02652 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002619 518.0
BYDH3_k127_354997_0 NADH:flavin oxidoreductase / NADH oxidase family - - - 0.000000000000000000000000000000000000000000000000000000000000000179 238.0
BYDH3_k127_354997_1 Cytochrome c K10535 - 1.7.2.6 0.000000000000000000000000000004751 131.0
BYDH3_k127_3560843_0 transcriptional regulatory protein - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005341 340.0
BYDH3_k127_3560843_1 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.00000000000000000000000000000000000000000000000001826 186.0
BYDH3_k127_3560843_2 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 GO:0000725,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008821,GO:0009058,GO:0009059,GO:0009987,GO:0016787,GO:0016788,GO:0016889,GO:0016894,GO:0031297,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0045005,GO:0046483,GO:0048476,GO:0050896,GO:0051716,GO:0071704,GO:0071932,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901576 3.1.22.4 0.00000000000000000000000000000000000000000001627 166.0
BYDH3_k127_3560843_3 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.000000000000000000000000000000000002256 140.0
BYDH3_k127_3571998_0 Involved in the biosynthesis of porphyrin-containing compound - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000179 400.0
BYDH3_k127_3571998_1 Domain of unknown function (DUF4143) - - - 0.0000000000000000000000000000000000000000000000000008821 191.0
BYDH3_k127_3571998_2 PFAM CBS domain - - - 0.00000000007678 62.0
BYDH3_k127_362206_0 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002149 249.0
BYDH3_k127_362206_1 nuclear chromosome segregation - - - 0.0000000000000007582 86.0
BYDH3_k127_362206_2 Bacterial regulatory protein, Fis family K07715 - - 0.000000007668 58.0
BYDH3_k127_362211_0 NADH flavin oxidoreductase NADH oxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001931 363.0
BYDH3_k127_362211_1 NADH flavin oxidoreductase NADH oxidase - - - 0.00000000000000000000000000000000000000000000000000000000000002097 224.0
BYDH3_k127_362211_2 NADPH-dependent FMN reductase - - - 0.00000000000002253 74.0
BYDH3_k127_3632273_0 Uncharacterized protein conserved in bacteria (DUF2344) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006248 532.0
BYDH3_k127_3687256_0 PFAM Thiolase, C-terminal domain K00626 - 2.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000008064 247.0
BYDH3_k127_3687256_1 COG0526, thiol-disulfide isomerase and thioredoxins - - - 0.000000000000000000000000004095 120.0
BYDH3_k127_3687256_2 DUF35 OB-fold domain, acyl-CoA-associated K07068 - - 0.000000000000000000005482 97.0
BYDH3_k127_3687256_3 Thiolase, N-terminal domain K00626 - 2.3.1.9 0.000000000000001444 77.0
BYDH3_k127_3687256_4 - - - - 0.0000000001205 71.0
BYDH3_k127_3687256_5 Belongs to the thiolase family - - - 0.000005307 51.0
BYDH3_k127_3706385_0 TonB-dependent receptor plug K02014,K16092 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001078 612.0
BYDH3_k127_3706385_1 PFAM periplasmic binding protein K02016 - - 0.000000000000000000000000002748 116.0
BYDH3_k127_3706385_2 TonB-dependent receptor plug K02014,K16092 - - 0.00007729 48.0
BYDH3_k127_3721883_0 Amidohydrolase K22213 - 4.1.1.52 0.000000000000000000000000000000000000000000000000000000000000000000000000001324 267.0
BYDH3_k127_3721883_1 [2Fe-2S] binding domain K03518 - 1.2.5.3 0.0000000000000000000000000000000000000000000000000000000000000001248 224.0
BYDH3_k127_3724485_0 PFAM 2-hydroxyglutaryl-CoA dehydratase, D-component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002039 569.0
BYDH3_k127_3724485_1 BadF/BadG/BcrA/BcrD ATPase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001504 346.0
BYDH3_k127_3728923_0 PFAM DAHP synthetase I KDSA K03856 - 2.5.1.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004202 388.0
BYDH3_k127_3728923_1 Prephenate dehydratase K03856,K04518,K14170 GO:0003674,GO:0003824,GO:0004106,GO:0004664,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006558,GO:0006570,GO:0006571,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009094,GO:0009095,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0016853,GO:0016866,GO:0017144,GO:0019438,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902221,GO:1902223 2.5.1.54,4.2.1.51,5.4.99.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004571 335.0
BYDH3_k127_3728923_2 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 - 1.1.1.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002255 287.0
BYDH3_k127_3728923_3 3-dehydroquinate dehydratase activity K00014,K03785,K13832 GO:0000166,GO:0003674,GO:0003824,GO:0003855,GO:0004764,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006725,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009712,GO:0009713,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0016829,GO:0016835,GO:0016836,GO:0017144,GO:0018958,GO:0019438,GO:0019632,GO:0019752,GO:0032787,GO:0036094,GO:0042537,GO:0042802,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046189,GO:0046278,GO:0046279,GO:0046394,GO:0046417,GO:0048037,GO:0050661,GO:0050662,GO:0055114,GO:0071704,GO:0072330,GO:0097159,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1901615,GO:1901617 1.1.1.25,4.2.1.10 0.000000000000000000000000000000000000002457 156.0
BYDH3_k127_3730144_0 Protein of unknown function (DUF975) - - - 0.000000000000000000000000000000000000000000000000000000000000000714 225.0
BYDH3_k127_3730144_1 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.000000000000000000000000000000000000000000000000000000001648 205.0
BYDH3_k127_3730144_2 acetyltransferase K03825 - - 0.000000000000004194 79.0
BYDH3_k127_3781099_0 PFAM Protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001274 495.0
BYDH3_k127_3781099_1 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 0.0000008115 52.0
BYDH3_k127_3784174_0 Domain of unknown function (DUF362) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001463 359.0
BYDH3_k127_3784174_1 - - - - 0.00000000000000000000000000000000000000000000000002382 192.0
BYDH3_k127_3820722_0 von Willebrand factor, type A K07114 - - 0.0000000000000000000000000000000000000000000000000001698 193.0
BYDH3_k127_3820722_1 oxidoreductase activity K07114 - - 0.00000000000000000000000000000000009618 139.0
BYDH3_k127_3820722_2 von Willebrand factor, type A K07114 - - 0.0000000000001622 74.0
BYDH3_k127_3820722_3 Tetratricopeptide repeat - - - 0.000000009136 66.0
BYDH3_k127_3821308_0 MGS-like domain K00602 - 2.1.2.3,3.5.4.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005588 276.0
BYDH3_k127_3821308_1 - - - - 0.000000000000000000000000000000009527 130.0
BYDH3_k127_3821308_3 Mitochondrial small ribosomal subunit Rsm22 - - - 0.000000000286 63.0
BYDH3_k127_3824226_0 FAD binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004771 402.0
BYDH3_k127_3824226_2 Similarity to COG1053 Succinate dehydrogenase fumarate reductase, flavoprotein - - - 0.000000007785 61.0
BYDH3_k127_3825363_0 Serine aminopeptidase, S33 K01055 - 3.1.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002562 344.0
BYDH3_k127_3825363_1 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003448 266.0
BYDH3_k127_3825363_2 ATP-binding protein K06915 - - 0.0000000000000000000000000000000000000000000000000000000000001109 214.0
BYDH3_k127_3825363_3 Bacterial protein of unknown function (DUF853) K06915 - - 0.0000000000000000005381 87.0
BYDH3_k127_3836723_0 PFAM Protein kinase K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000004152 268.0
BYDH3_k127_3836723_1 4Fe-4S single cluster domain - - - 0.000000000000000000000000000000004796 137.0
BYDH3_k127_3843967_0 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004327 324.0
BYDH3_k127_3843967_1 PFAM Transglycosylase SLT domain K08309 - - 0.00000000000000000000000000000000000000000000449 170.0
BYDH3_k127_3843967_2 monooxygenase activity K00688,K15760,K16157,K16242,K18223,K22353,K22357 GO:0003674,GO:0003824,GO:0004497,GO:0005575,GO:0008150,GO:0008152,GO:0009987,GO:0015049,GO:0015050,GO:0015947,GO:0016491,GO:0016705,GO:0016709,GO:0032991,GO:0043446,GO:0044237,GO:0055114,GO:0071704,GO:1902494 1.14.13.227,1.14.13.236,1.14.13.25,1.14.13.69,2.4.1.1 0.0000001604 54.0
BYDH3_k127_3887432_0 PFAM ResB family protein K07399 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003855 301.0
BYDH3_k127_3887432_1 TIGRFAM cytochrome c-type biogenesis protein CcsB - - - 0.0000000000000000000000000000000000000000000000000006926 191.0
BYDH3_k127_3915716_0 two component, sigma54 specific, transcriptional regulator, Fis family K02481 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004228 548.0
BYDH3_k127_3915716_1 PFAM ATP-binding region, ATPase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005016 261.0
BYDH3_k127_3915716_2 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.00000000000000000000000000000000000000000000000000002262 193.0
BYDH3_k127_4043111_0 Transmembrane secretion effector - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005733 387.0
BYDH3_k127_4043111_1 PFAM fumarate reductase succinate dehydrogenase flavoprotein domain protein K13796 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007328 344.0
BYDH3_k127_4043111_2 PFAM fumarate reductase succinate dehydrogenase flavoprotein domain protein K13796 - - 0.000000000000000000000000000000000000000000000000000000000000000000000177 253.0
BYDH3_k127_4043111_3 Thi4 family K00239,K00244 - 1.3.5.1,1.3.5.4 0.0000005898 53.0
BYDH3_k127_4066933_0 beta-lactamase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000002381 218.0
BYDH3_k127_4066933_1 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA K01520 - 3.6.1.23 0.0000000000000000000000000000000000000000000000000000000173 200.0
BYDH3_k127_40682_0 Gtr1/RagA G protein conserved region K06883 GO:0008150,GO:0032879,GO:0032880,GO:0050789,GO:0065007 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002864 280.0
BYDH3_k127_40682_1 Cellulose biosynthesis protein BcsQ - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001443 282.0
BYDH3_k127_40682_2 PFAM response regulator receiver - - - 0.000000000000000000000000000000000000000000000000000000005408 208.0
BYDH3_k127_4077693_0 Aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 0.0 1091.0
BYDH3_k127_4077693_1 4Fe-4S dicluster domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000238 228.0
BYDH3_k127_4077693_3 domain, Protein - - - 0.00000001733 61.0
BYDH3_k127_4120205_0 AcrB/AcrD/AcrF family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008915 439.0
BYDH3_k127_4120205_1 AcrB/AcrD/AcrF family - - - 0.00000000000000008689 80.0
BYDH3_k127_4134867_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001106 556.0
BYDH3_k127_4159666_0 Sulfatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005166 353.0
BYDH3_k127_4159666_1 Arylsulfotransferase (ASST) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001222 293.0
BYDH3_k127_418624_0 PFAM MgsA AAA ATPase C terminal K07478 - - 0.0000000000000000000000000000000000000000000000000000000000134 210.0
BYDH3_k127_418624_1 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000006097 92.0
BYDH3_k127_418624_2 cheY-homologous receiver domain - - - 0.0000663 50.0
BYDH3_k127_4200533_0 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009722 457.0
BYDH3_k127_4200533_1 AMMECR1 K09141 - - 0.0000000000000000000007966 95.0
BYDH3_k127_4205957_0 Chemotaxis phosphatase CheX K03409 - - 0.00000000000000000000000000000000000000000000000000006236 191.0
BYDH3_k127_4205957_1 cheY-homologous receiver domain K03413 - - 0.00000000000000000000000000000000000000000005858 162.0
BYDH3_k127_422983_0 sensory box sensor histidine kinase VC1084 imported - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001989 354.0
BYDH3_k127_422983_1 Response regulator receiver - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001471 289.0
BYDH3_k127_4235792_0 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.00000000000000000000000000000000000000000000000000000000000000000001414 241.0
BYDH3_k127_4235792_1 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.000000000000000000000000000000000000000000000000000000000000000002696 232.0
BYDH3_k127_4235792_2 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.00000000000000000000000000000000000005414 148.0
BYDH3_k127_4245069_0 Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane K19804 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000008235 304.0
BYDH3_k127_4245069_1 Scavenger mRNA decapping enzyme C-term binding K19710 - 2.7.7.53 0.00000000000000000000000000000000000000000000000000000000000007196 217.0
BYDH3_k127_4245069_2 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.000000000000000000000000000000000000000000000000000000001509 205.0
BYDH3_k127_4245069_3 Calcineurin-like phosphoesterase superfamily domain K07095 - - 0.0000000000000000000000000000000000988 137.0
BYDH3_k127_4245069_4 Lipopolysaccharide assembly protein A domain K08992 - - 0.0000001309 57.0
BYDH3_k127_4265812_0 Thiolase, C-terminal domain K00626 - 2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002941 392.0
BYDH3_k127_4265812_1 Belongs to the enoyl-CoA hydratase isomerase family K01715 - 4.2.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004723 317.0
BYDH3_k127_4265812_2 Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB NOP family K22446 - - 0.000000000000000000000000000000000008423 143.0
BYDH3_k127_4273096_0 NADH flavin oxidoreductase NADH oxidase K00219 - 1.3.1.34 7.586e-229 726.0
BYDH3_k127_4273116_0 PFAM Acyl-CoA dehydrogenase K19066 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0008150,GO:0008152,GO:0009987,GO:0016043,GO:0016491,GO:0016627,GO:0022607,GO:0036094,GO:0043167,GO:0043168,GO:0043933,GO:0044085,GO:0048037,GO:0050660,GO:0050662,GO:0051259,GO:0051262,GO:0052890,GO:0055114,GO:0065003,GO:0071840,GO:0097159,GO:1901265,GO:1901363 1.3.8.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004103 422.0
BYDH3_k127_4273116_1 Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ) K00878 - 2.7.1.50 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004171 316.0
BYDH3_k127_4273116_2 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 - 2.5.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000001782 256.0
BYDH3_k127_4273116_3 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.00000000000000000000000000000000000000000000000000000000000000000001039 245.0
BYDH3_k127_4273116_4 histidine kinase HAMP region domain protein K07640 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000002989 232.0
BYDH3_k127_4273116_5 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) K03183 - 2.1.1.163,2.1.1.201 0.000000000000000000000000000000000000000000000000000000005607 205.0
BYDH3_k127_4278962_0 HD domain K07814 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007903 497.0
BYDH3_k127_4278962_1 Belongs to the GPI family K01810 GO:0003674,GO:0003824,GO:0004347,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0005996,GO:0006006,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0018130,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046031,GO:0046034,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576 5.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000002818 276.0
BYDH3_k127_4278962_2 Colicin V production protein K03558 - - 0.00000006025 58.0
BYDH3_k127_4295032_0 PFAM ATP-binding region, ATPase domain protein K07709 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001302 513.0
BYDH3_k127_4295032_1 ATP-independent chaperone mediated protein folding K07803 GO:0003674,GO:0005488,GO:0005507,GO:0005575,GO:0005623,GO:0008270,GO:0016151,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043167,GO:0043169,GO:0044464,GO:0046872,GO:0046914,GO:0050897 - 0.0000001081 59.0
BYDH3_k127_43644_0 Belongs to the bacterial glucokinase family K00845 - 2.7.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003994 338.0
BYDH3_k127_43644_1 FHA domain K07315 - 3.1.3.3 0.000000000000001002 87.0
BYDH3_k127_43644_2 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.000001929 56.0
BYDH3_k127_436481_0 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K08483 - 2.7.3.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002234 509.0
BYDH3_k127_436481_1 Phosphocarrier protein HPr K08485,K11189 - - 0.00002083 47.0
BYDH3_k127_4439051_0 PFAM Endonuclease Exonuclease phosphatase K01142 - 3.1.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007269 297.0
BYDH3_k127_4439051_1 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000000009885 239.0
BYDH3_k127_4439051_2 'Cold-shock' DNA-binding domain K03704 - - 0.0000000000000005916 77.0
BYDH3_k127_4450035_0 lysine biosynthetic process via aminoadipic acid - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005559 484.0
BYDH3_k127_4469850_0 Esterase PHB depolymerase - - - 0.000000000000000000000000000001613 136.0
BYDH3_k127_4480712_0 Peptidase family M48 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004208 320.0
BYDH3_k127_4480712_1 SMART Adenylyl cyclase class-3 4 guanylyl cyclase K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000006778 222.0
BYDH3_k127_4480712_2 Shikimate kinase K00891 - 2.7.1.71 0.000000000000000000000000000000000000000000000000000147 191.0
BYDH3_k127_4480712_3 Src homology 3 domains K01227,K01447,K01448,K06385,K07260,K11060,K11062,K21472 - 3.2.1.96,3.4.17.14,3.5.1.28 0.0000000000000000000000000000000009349 136.0
BYDH3_k127_4483927_0 Putative cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002469 408.0
BYDH3_k127_4483927_1 Transcriptional regulator - - - 0.00000000000000000000000000000009617 134.0
BYDH3_k127_4543306_0 ABC transporter transmembrane region K06147,K18889 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001283 560.0
BYDH3_k127_4578528_0 DnaJ molecular chaperone homology domain K03686,K05516 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007164 315.0
BYDH3_k127_4578528_1 Domain of unknown function (DUF814) - - - 0.00000000000000000000000000000002139 128.0
BYDH3_k127_4628847_0 PFAM fumarate reductase succinate dehydrogenase flavoprotein domain protein K00239,K00244,K17363 - 1.3.5.1,1.3.5.4,1.3.99.33 0.000000000000005528 87.0
BYDH3_k127_4628847_1 binding domain protein - - - 0.00000000001411 68.0
BYDH3_k127_4628900_0 Elongator protein 3, MiaB family, Radical SAM K22318 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009671 570.0
BYDH3_k127_4628900_1 Belongs to the DEAD box helicase family K11927 - 3.6.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001186 327.0
BYDH3_k127_4643430_0 Probable molybdopterin binding domain K03750 - 2.10.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006853 551.0
BYDH3_k127_4643430_1 Permease MlaE K02066 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003424 266.0
BYDH3_k127_4643430_2 cell redox homeostasis K03671 - - 0.00000000000000000000000000000000000000000000000000000002141 205.0
BYDH3_k127_4643430_3 Mammalian cell entry related domain protein K02067 - - 0.00000000000000000000000000000000001952 139.0
BYDH3_k127_4643430_4 ATPase activity K02013,K05776 - 3.6.3.34 0.000000000000000000000000315 111.0
BYDH3_k127_4654089_0 HDOD domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004143 336.0
BYDH3_k127_4654089_1 HEAT repeats - - - 0.00000000000000000000000000000000004435 142.0
BYDH3_k127_4681836_0 MotA/TolQ/ExbB proton channel family K03561 - - 0.0000000000000000000000000003083 118.0
BYDH3_k127_4681836_1 Biopolymer transport protein ExbD TolR K03559 - - 0.00000000000004348 78.0
BYDH3_k127_4681836_2 cell cycle K05589,K12065,K13052 - - 0.000000002996 62.0
BYDH3_k127_4681836_3 Tetratricopeptide TPR_2 repeat protein - - - 0.00001663 51.0
BYDH3_k127_4694330_0 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000244 333.0
BYDH3_k127_4694330_1 PFAM fumarate reductase succinate dehydrogenase flavoprotein domain protein K00244 - 1.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002612 329.0
BYDH3_k127_4694330_2 TonB dependent receptor K02014 - - 0.000000000000000000000005894 109.0
BYDH3_k127_4711029_0 Na+-transporting oxaloacetate decarboxylase beta subunit K01572 - 4.1.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003449 521.0
BYDH3_k127_4711029_1 PFAM Integral membrane protein TerC - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001204 264.0
BYDH3_k127_4711029_2 Cytidylate kinase-like family - - - 0.000000000000000000000000000000000000000000000000000000000000000001118 236.0
BYDH3_k127_4716411_0 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000003728 258.0
BYDH3_k127_4716411_1 riboflavin synthase, alpha K00793 - 2.5.1.9 0.0000000000000000000000000000000000000000000000000000000002059 210.0
BYDH3_k127_4716411_2 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.0000000000000000000000005388 108.0
BYDH3_k127_4718776_0 TIGRFAM lysine 2,3-aminomutase YodO family protein K01843 - 5.4.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004213 593.0
BYDH3_k127_4718776_1 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004115 489.0
BYDH3_k127_4718776_2 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005565 448.0
BYDH3_k127_4718776_3 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005673 389.0
BYDH3_k127_4718776_4 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.00000000267 57.0
BYDH3_k127_4719695_0 PFAM fumarate reductase succinate dehydrogenase flavoprotein domain protein K00244 - 1.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002124 350.0
BYDH3_k127_4719695_1 SnoaL-like domain - - - 0.0000000000000006141 88.0
BYDH3_k127_4719695_2 FAD binding domain - - - 0.00000000007033 68.0
BYDH3_k127_4719695_3 FAD binding domain - - - 0.0002554 50.0
BYDH3_k127_4757531_0 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 3.443e-298 927.0
BYDH3_k127_4757531_1 Protein of unknown function DUF72 - - - 0.00000000009536 62.0
BYDH3_k127_47766_0 Adenine deaminase C-terminal domain K01486 - 3.5.4.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003968 601.0
BYDH3_k127_47766_1 Proposed homoserine kinase K15635 - 5.4.2.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009659 356.0
BYDH3_k127_4819337_0 PFAM fumarate reductase succinate dehydrogenase flavoprotein domain protein K00244 - 1.3.5.4 0.00000000000000000000000000000000000000000001703 177.0
BYDH3_k127_4819337_1 Nuclease-related domain - - - 0.0000000000000000000000000000000001689 137.0
BYDH3_k127_4819696_0 GAD domain K01876 - 6.1.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001308 398.0
BYDH3_k127_4819696_1 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.000000002465 63.0
BYDH3_k127_4841928_0 MotA/TolQ/ExbB proton channel family K02556 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002064 317.0
BYDH3_k127_4841928_1 OmpA MotB domain protein K02557 - - 0.000000000000000000000000000000000000000000000000000000000000000147 234.0
BYDH3_k127_4841928_2 PFAM Type IV pilus assembly PilZ - - - 0.00000006541 59.0
BYDH3_k127_484613_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004936 424.0
BYDH3_k127_484613_1 Histidine kinase K02660,K11525 - - 0.00000000000000000000000000000000000000004555 156.0
BYDH3_k127_4859818_0 COGs COG1053 Succinate dehydrogenase fumarate reductase flavoprotein subunit K00244 - 1.3.5.4 0.00000000000000000000000000000000000000000009719 181.0
BYDH3_k127_4859818_1 FMN_bind K00244 - 1.3.5.4 0.0000000000000000000000000000000000006603 159.0
BYDH3_k127_4859818_2 COGs COG1053 Succinate dehydrogenase fumarate reductase flavoprotein subunit K00244 - 1.3.5.4 0.000000000000000000000000000001074 133.0
BYDH3_k127_4859818_3 Pyridoxamine 5'-phosphate oxidase - - - 0.000000008913 62.0
BYDH3_k127_4859818_4 Pyridoxamine 5'-phosphate oxidase - - - 0.0000001999 64.0
BYDH3_k127_4859818_5 Flavodoxin domain - - - 0.00003546 55.0
BYDH3_k127_4899865_0 tRNA nucleotidyltransferase poly(A) polymerase K00970,K00974 - 2.7.7.19,2.7.7.72 0.00000000000000000000000000000000000000000000000000000000000000000000002082 253.0
BYDH3_k127_4899865_1 D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1 K03841 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005984,GO:0005985,GO:0005986,GO:0005996,GO:0006000,GO:0006002,GO:0006006,GO:0006094,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009058,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019203,GO:0019318,GO:0019319,GO:0019637,GO:0030388,GO:0034637,GO:0042132,GO:0042578,GO:0044237,GO:0044238,GO:0044249,GO:0044262,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046351,GO:0046364,GO:0050308,GO:0071704,GO:1901135,GO:1901576 3.1.3.11 0.0000000000000000000000000000000000000000000000000000000005895 205.0
BYDH3_k127_4910975_0 ABC transporter transmembrane region K06147 - - 2.238e-259 814.0
BYDH3_k127_4910975_1 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor - - - 0.0000000000000000000000000000000000000000000000000304 183.0
BYDH3_k127_4910975_2 Psort location Cytoplasmic, score - - - 0.000000000000000000000000002829 113.0
BYDH3_k127_4910975_3 snoRNA binding - - - 0.000000000001043 72.0
BYDH3_k127_4924216_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003112 307.0
BYDH3_k127_4924216_1 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.0000000000000000000000000000000000000000000000000000000001511 208.0
BYDH3_k127_4924216_2 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.000000000000000000000000000000000000000000005243 171.0
BYDH3_k127_4924216_3 - - - - 0.0000000000000000002025 90.0
BYDH3_k127_4929646_0 Barrel-sandwich domain of CusB or HlyD membrane-fusion - - - 0.0000000000000000000000000000000004976 139.0
BYDH3_k127_4929646_1 Protein of unknown function (DUF3467) - - - 0.00000000000000000000000000000008739 127.0
BYDH3_k127_4932243_0 Flavodoxin domain - - - 0.000000000000000000000000000000000009999 146.0
BYDH3_k127_4932243_1 - - - - 0.00000000000000000004907 97.0
BYDH3_k127_493801_0 TIGRFAM phenylalanyl-tRNA synthetase, beta subunit K01890 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002333 578.0
BYDH3_k127_4989739_0 PFAM Short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000014 344.0
BYDH3_k127_4989739_1 Belongs to the beta-ketoacyl-ACP synthases family K00647 - 2.3.1.41 0.00000000000000000000000000000001559 128.0
BYDH3_k127_4989739_2 PFAM periplasmic binding protein K02016 - - 0.000000000000000000000000000009838 126.0
BYDH3_k127_499993_0 General secretion pathway protein J K02459 GO:0002790,GO:0006810,GO:0008104,GO:0008150,GO:0009306,GO:0009987,GO:0015031,GO:0015628,GO:0015833,GO:0032940,GO:0033036,GO:0042886,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0098776 - 0.0000008885 59.0
BYDH3_k127_499993_1 Prokaryotic N-terminal methylation motif - - - 0.000002759 55.0
BYDH3_k127_499993_2 Prokaryotic N-terminal methylation motif K02458 - - 0.00003667 52.0
BYDH3_k127_5010173_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002338 515.0
BYDH3_k127_5010173_1 Belongs to the GTP cyclohydrolase I type 2 NIF3 family - - - 0.000000000000000009299 84.0
BYDH3_k127_5027643_0 Glycosyl hydrolase family 3 C-terminal domain K05349 - 3.2.1.21 2.181e-302 940.0
BYDH3_k127_5027643_1 ROK family - - - 0.0001107 49.0
BYDH3_k127_5036102_0 ATPase family associated with various cellular activities (AAA) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001243 393.0
BYDH3_k127_5036102_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003196 329.0
BYDH3_k127_5036102_2 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008133 312.0
BYDH3_k127_5036102_3 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.00000000000000000000000000000000000000000000000000007102 200.0
BYDH3_k127_5036102_4 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.000000000006677 68.0
BYDH3_k127_5036102_5 Belongs to the 'phage' integrase family - - - 0.0000000001631 65.0
BYDH3_k127_5073305_0 imidazoleglycerol-phosphate dehydratase K01693 GO:0000105,GO:0003674,GO:0003824,GO:0004424,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.2.1.19 0.000000000000000000000000000000000000000000000000000000000000000000008039 239.0
BYDH3_k127_5073305_1 Belongs to the Fur family K03711 - - 0.00000000000000000000000000000000000000000000000000000000000006152 221.0
BYDH3_k127_5073305_2 TIGRFAM phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 GO:0000105,GO:0000162,GO:0003674,GO:0003824,GO:0003949,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006547,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.16 0.0000000000000000000000000000000000000000000000000003511 187.0
BYDH3_k127_5073305_3 - - - - 0.00000000000000000000007002 107.0
BYDH3_k127_5073305_4 serine threonine protein kinase - - - 0.000000001687 67.0
BYDH3_k127_5088197_0 Tex-like protein N-terminal domain K06959 - - 1.832e-290 910.0
BYDH3_k127_5088197_1 PFAM Xanthine uracil vitamin C permease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002734 388.0
BYDH3_k127_5088197_2 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 - 4.3.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002769 287.0
BYDH3_k127_5104072_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002342 587.0
BYDH3_k127_5104072_1 Major facilitator Superfamily K08218 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001733 299.0
BYDH3_k127_5104072_2 Core component of the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. Binds to DNA. The KaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction - - - 0.00000000000000000000000000000000000003154 152.0
BYDH3_k127_5105948_0 Thiolase, C-terminal domain K00626 - 2.3.1.9 3.794e-224 698.0
BYDH3_k127_5105948_1 Uncharacterised protein family UPF0052 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000612 328.0
BYDH3_k127_5105948_2 Displays ATPase and GTPase activities K06958 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004617 285.0
BYDH3_k127_5105948_3 Rubredoxin-like zinc ribbon domain (DUF35_N) K07068 - - 0.00000000000000000000000000000000000000000000000000000000002962 211.0
BYDH3_k127_5134973_0 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 - 2.1.1.199 0.0000000000000000000000000000000000000000000000000000000000000000000000000003877 265.0
BYDH3_k127_5134973_1 Penicillin-binding protein, dimerisation domain K03587 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000001154 228.0
BYDH3_k127_5134973_2 Belongs to the MraZ family K03925 - - 0.000000000000001666 79.0
BYDH3_k127_5138335_0 PFAM ATP-binding region, ATPase domain protein - - - 0.000000000000000000000000000000000000000000000000005852 186.0
BYDH3_k127_5138335_1 Ferredoxin K17992 - 1.12.1.3 0.000000000000000000000000000000000000000000001527 168.0
BYDH3_k127_5138335_2 NADH dehydrogenase - - - 0.000000000000000000000001114 104.0
BYDH3_k127_5138335_3 PHP domain protein - - - 0.0000000000002549 72.0
BYDH3_k127_5145480_0 transmembrane transporter activity K02445 - - 0.00000000000000000000000000000000000000000000000000000000003324 214.0
BYDH3_k127_5145480_1 Electron transfer flavoprotein domain K03521 - - 0.000000000000000000000000000000000000000007429 166.0
BYDH3_k127_5153304_0 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead - - - 0.00000000000000000000000000000000000000000000000000000000000000000108 241.0
BYDH3_k127_5193371_0 Pyridine nucleotide-disulphide oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002531 610.0
BYDH3_k127_5193371_1 Belongs to the thiolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003025 554.0
BYDH3_k127_5193371_2 SMART Elongator protein 3 MiaB NifB - - - 0.0000000000000000000000000000904 119.0
BYDH3_k127_5210758_0 PFAM peptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003906 333.0
BYDH3_k127_5210758_1 Putative RNA methylase family UPF0020 K07444 - - 0.0000000000000000000000000000000000000000000000000000007817 197.0
BYDH3_k127_5210758_2 Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine K12960 - 3.5.4.28,3.5.4.31 0.000000000000000000000000000000000000000000000000001181 187.0
BYDH3_k127_5210758_3 Putative RNA methylase family UPF0020 K07444 - - 0.00000000000000000000000000000000000000002193 158.0
BYDH3_k127_5213540_0 DEAD DEAH box helicase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004878 623.0
BYDH3_k127_5213540_1 COG0564 Pseudouridylate synthases, 23S RNA-specific K06177 - 5.4.99.28,5.4.99.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000002015 270.0
BYDH3_k127_5213540_2 Signal peptide protein - - - 0.0006183 48.0
BYDH3_k127_5284212_0 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K00175 - 1.2.7.11,1.2.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000737 377.0
BYDH3_k127_5284212_1 Pyruvate ferredoxin/flavodoxin oxidoreductase K00177 - 1.2.7.3 0.00000000000000000000000000000000000000000000000000000000001649 211.0
BYDH3_k127_5284212_2 Pyruvate:ferredoxin oxidoreductase core domain II K00174,K00186 - 1.2.7.11,1.2.7.3,1.2.7.7 0.00000000000000000000000000000000000000000000494 166.0
BYDH3_k127_5284212_3 receptor K02014 - - 0.000001178 56.0
BYDH3_k127_5299509_0 PFAM fumarate reductase succinate dehydrogenase flavoprotein domain protein K00244 - 1.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004526 335.0
BYDH3_k127_5299509_1 SnoaL-like domain - - - 0.00000000000000001702 89.0
BYDH3_k127_5339180_0 PLD-like domain - - - 0.0000000000000000000000000000000000000000000000000000000005638 205.0
BYDH3_k127_5339180_1 PAS domain containing protein K03406,K13924,K14986 - 2.1.1.80,2.7.13.3,3.1.1.61 0.000000000000000000000000000000000000002775 157.0
BYDH3_k127_5339180_2 PFAM pyridoxamine 5-phosphate oxidase-related FMN-binding - - - 0.000000000000000000000000000000000014 141.0
BYDH3_k127_5339180_3 Pyridoxamine 5'-phosphate oxidase - - - 0.0000000000000000000000000000000008997 134.0
BYDH3_k127_5365146_0 Psort location Cytoplasmic, score - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004713 347.0
BYDH3_k127_5365146_1 Domain of unknown function (DUF4143) - - - 0.000000000000000000000000000000000000001238 153.0
BYDH3_k127_5381245_0 PFAM 2-hydroxyglutaryl-CoA dehydratase D-component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003621 365.0
BYDH3_k127_5381245_1 D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1 K03841 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005984,GO:0005985,GO:0005986,GO:0005996,GO:0006000,GO:0006002,GO:0006006,GO:0006094,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009058,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019203,GO:0019318,GO:0019319,GO:0019637,GO:0030388,GO:0034637,GO:0042132,GO:0042578,GO:0044237,GO:0044238,GO:0044249,GO:0044262,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046351,GO:0046364,GO:0050308,GO:0071704,GO:1901135,GO:1901576 3.1.3.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001602 344.0
BYDH3_k127_5381245_2 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001077 346.0
BYDH3_k127_5381245_3 Calcineurin-like phosphoesterase K07313 - 3.1.3.16 0.000000000000000000000000000000000000000000000003961 176.0
BYDH3_k127_5381831_0 TIGRFAM DNA polymerase III, alpha subunit K02337 - 2.7.7.7 1.622e-262 841.0
BYDH3_k127_5398250_0 succinate dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001846 396.0
BYDH3_k127_5398250_1 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000041 307.0
BYDH3_k127_5402443_0 Cation transporter/ATPase, N-terminus K01537 - 3.6.3.8 7.546e-317 993.0
BYDH3_k127_5402443_1 Belongs to the ABC transporter superfamily K02031,K02032 - - 9.634e-230 717.0
BYDH3_k127_5402974_0 Seven times multi-haem cytochrome CxxCH - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001231 581.0
BYDH3_k127_5402974_1 Ferredoxin thioredoxin reductase catalytic beta chain - - - 0.0000000000000000000000000000000000000000000000003633 178.0
BYDH3_k127_5402974_2 PFAM Glutaredoxin K06191 - - 0.0000000000000000000000000000007104 123.0
BYDH3_k127_540537_0 Enoyl-CoA hydratase/isomerase K20765 - 3.7.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000608 271.0
BYDH3_k127_540537_1 Thiolase, C-terminal domain - - - 0.00000000000000000000000000000000008295 137.0
BYDH3_k127_540537_2 beta-keto acid cleavage enzyme - - - 0.0000000000000000000000446 103.0
BYDH3_k127_5410715_0 Transcriptional regulatory protein, C terminal K07664 - - 0.000000000000000000000000000000000000000000000000000000000000000000000005567 251.0
BYDH3_k127_5410715_1 NADH flavin oxidoreductase NADH oxidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003026 258.0
BYDH3_k127_5410715_2 SnoaL-like domain - - - 0.0000000000000000000003004 105.0
BYDH3_k127_5424105_0 Electron transfer flavoprotein FAD-binding domain K03522 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003655 394.0
BYDH3_k127_5424105_1 Electron transfer flavoprotein domain K03521 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001294 336.0
BYDH3_k127_5427160_0 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009714 439.0
BYDH3_k127_5427160_1 Transcriptional regulator - - - 0.000000000000000000000000000000000000001418 151.0
BYDH3_k127_5427160_2 Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine K00641 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004414,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008374,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009069,GO:0009086,GO:0009092,GO:0009987,GO:0016053,GO:0016407,GO:0016413,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.3.1.31 0.0000000000000002646 80.0
BYDH3_k127_544509_0 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily K01465 GO:0003674,GO:0003824,GO:0004038,GO:0004151,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006144,GO:0006145,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016787,GO:0016810,GO:0016812,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046113,GO:0046390,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 3.5.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006847 354.0
BYDH3_k127_544509_1 sigma-54 factor interaction domain-containing protein K02667 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006342 302.0
BYDH3_k127_544509_2 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily K01465 GO:0003674,GO:0003824,GO:0004038,GO:0004151,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006144,GO:0006145,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016787,GO:0016810,GO:0016812,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046113,GO:0046390,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 3.5.2.3 0.0000000000000000000000000000003698 123.0
BYDH3_k127_5466950_0 TPR repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002936 254.0
BYDH3_k127_5466950_1 Acid phosphatase homologues - - - 0.000000000000000000000000000000000000000000000000000000007624 208.0
BYDH3_k127_5466950_2 Tetratricopeptide TPR_2 repeat protein - - - 0.0000000000000000000000000000000000000000000008015 170.0
BYDH3_k127_5483594_0 PFAM type II secretion system protein E K02669 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001117 312.0
BYDH3_k127_5483594_1 PFAM type II secretion system protein E K02669 - - 0.0000000000000001413 79.0
BYDH3_k127_5483594_2 This enzyme acetylates the N-terminal alanine of ribosomal protein S18 K03789 - 2.3.1.128 0.000009327 55.0
BYDH3_k127_55257_0 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006871 430.0
BYDH3_k127_55257_1 Carbamoyl-phosphate synthetase large chain, oligomerisation domain K01955 - 6.3.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004953 269.0
BYDH3_k127_5542385_0 peptidase M48, Ste24p - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001134 306.0
BYDH3_k127_5542385_1 TIGRFAM ribonuclease, Rne Rng family K08300,K08301 - 3.1.26.12 0.00000000000000000000000000000000000000000000000000000000007116 210.0
BYDH3_k127_5542385_2 PFAM peptidase - - - 0.0000000000000000000265 95.0
BYDH3_k127_5561629_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001076 419.0
BYDH3_k127_5561629_1 RNA pseudouridylate synthase K06177 - 5.4.99.28,5.4.99.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000721 271.0
BYDH3_k127_5561629_2 pseudouridine synthase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000005833 248.0
BYDH3_k127_5561629_3 Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA K03439 GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008176,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0034708,GO:0036265,GO:0040007,GO:0043170,GO:0043412,GO:0043414,GO:0043527,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0106004,GO:0140098,GO:0140101,GO:1901360,GO:1902494,GO:1990234 2.1.1.33 0.0000000000000000000000000000000000000000000601 168.0
BYDH3_k127_5561629_4 Helix-turn-helix domain - - - 0.00000000000000000008976 92.0
BYDH3_k127_5561629_5 Acetyltransferase (GNAT) family - - - 0.00000000000000000244 91.0
BYDH3_k127_5561629_7 PFAM Phage derived protein Gp49-like (DUF891) - - - 0.00002074 47.0
BYDH3_k127_5579860_0 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657,K13503 - 4.1.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001439 421.0
BYDH3_k127_5617856_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086,K03089 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007995 345.0
BYDH3_k127_5617856_1 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 GO:0003674,GO:0003824,GO:0004812,GO:0004831,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016875,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000006991 242.0
BYDH3_k127_5617856_2 Tetratricopeptide repeat - - - 0.00000006697 63.0
BYDH3_k127_5622863_0 phosphoglucomutase phosphomannomutase alpha beta alpha domain I K01835 - 5.4.2.2 2.496e-194 616.0
BYDH3_k127_5645703_0 Ammonium Transporter Family K03320 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008745 539.0
BYDH3_k127_5645703_1 PFAM Mg2 transporter protein CorA family protein K03284 - - 0.0000000000000000724 81.0
BYDH3_k127_5654248_0 PFAM molybdopterin binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005949 475.0
BYDH3_k127_5654248_1 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001607 321.0
BYDH3_k127_5654248_2 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000001006 259.0
BYDH3_k127_5654248_3 NifU-like N terminal domain - - - 0.00000000000000000002555 95.0
BYDH3_k127_5674609_0 TIGRFAM acetylornithine and succinylornithine K00821 - 2.6.1.11,2.6.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005108 496.0
BYDH3_k127_5674609_1 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 GO:0000050,GO:0000053,GO:0003674,GO:0003824,GO:0004055,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006575,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0019627,GO:0019752,GO:0034641,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:0072350,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 6.3.4.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002089 430.0
BYDH3_k127_5674609_2 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611,K09065,K13252 - 2.1.3.3,2.1.3.6,2.1.3.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001942 317.0
BYDH3_k127_5674609_3 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 - 6.3.4.5 0.00000000000000000000000000000000000000001055 154.0
BYDH3_k127_5685508_0 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004654,GO:0005488,GO:0006139,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009892,GO:0009987,GO:0010468,GO:0010605,GO:0010629,GO:0016070,GO:0016071,GO:0016740,GO:0016772,GO:0016779,GO:0019222,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0060255,GO:0065007,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901575 2.7.7.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008624 595.0
BYDH3_k127_5685508_1 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 - - 0.000000000000000149 79.0
BYDH3_k127_5702845_0 SMART Tetratricopeptide domain protein - - - 0.0000000000000000000000000000000000000000000000001514 188.0
BYDH3_k127_5702845_1 FecR protein - - - 0.000000000000000000000000000000001442 142.0
BYDH3_k127_5702845_2 Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744 - - 0.0000000006524 66.0
BYDH3_k127_5702845_3 AAA ATPase domain - - - 0.00003361 53.0
BYDH3_k127_5710412_0 FlhB HrpN YscU SpaS Family K02401 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001712 302.0
BYDH3_k127_5710412_1 Role in flagellar biosynthesis K02421 - - 0.000000000000000000003869 96.0
BYDH3_k127_5716661_0 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003215 393.0
BYDH3_k127_5716661_1 Yqey-like protein K09117 - - 0.00000000000000000000000000000008818 129.0
BYDH3_k127_5716661_2 Histidine biosynthesis protein K01814 GO:0000105,GO:0000162,GO:0003674,GO:0003824,GO:0003949,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006547,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.16 0.0000000000000006896 78.0
BYDH3_k127_5718303_0 TIGRFAM cytochrome c-type biogenesis protein CcsB - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005663 282.0
BYDH3_k127_5718303_1 phosphatase activity K05967 - - 0.0000000000000000000000000000000000000001072 156.0
BYDH3_k127_5718303_2 - - - - 0.00000000000000000000000000000006776 130.0
BYDH3_k127_5718303_3 N-(5'phosphoribosyl)anthranilate (PRA) isomerase K01817 - 5.3.1.24 0.00000000000000000000000008732 110.0
BYDH3_k127_5741212_0 PFAM CBS domain containing protein K04767 - - 0.000000000000000000000000000000000000000000000000000002512 197.0
BYDH3_k127_5741212_1 manganese ion transmembrane transporter activity - - - 0.0000000000000000000000000000000000008833 144.0
BYDH3_k127_5741212_2 Rubrerythrin - - - 0.000000000000000002332 87.0
BYDH3_k127_5741212_3 TIGRFAM thioredoxin K03672 - 1.8.1.8 0.00000000001052 66.0
BYDH3_k127_5756802_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 1.468e-274 871.0
BYDH3_k127_5756802_1 PFAM Outer membrane efflux protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002869 287.0
BYDH3_k127_577125_0 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004079 408.0
BYDH3_k127_577125_1 glucosamine-1-phosphate N-acetyltransferase activity K04042 - 2.3.1.157,2.7.7.23 0.00000000000000000000000000000000000003554 146.0
BYDH3_k127_5825008_0 Spermine/spermidine synthase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001861 357.0
BYDH3_k127_5825008_1 Enoyl-CoA hydratase/isomerase K07537 - 4.2.1.100 0.00000000000000000000000000000008316 128.0
BYDH3_k127_5834434_0 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 GO:0003674,GO:0003824,GO:0004798,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009165,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.4.9 0.000000000000000000000000000000000000000000000000000000000006138 214.0
BYDH3_k127_5834434_1 TIGRFAM DNA polymerase III, delta prime subunit K02341 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000005598 214.0
BYDH3_k127_5837925_0 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K00074 - 1.1.1.157 0.0000000000000000000000000000000000000000000000000000000003316 215.0
BYDH3_k127_5837925_1 Phospholipid methyltransferase - - - 0.000000000000000000001445 101.0
BYDH3_k127_5837925_2 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 - - 0.0000000000003057 72.0
BYDH3_k127_5837925_3 Phosphotransferase enzyme family - - - 0.00000133 54.0
BYDH3_k127_5860997_0 UPF0210 protein K09157 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001553 520.0
BYDH3_k127_5860997_1 endonuclease III K07457 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003217 267.0
BYDH3_k127_5860997_2 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.000000000000000000000000000000000000000000000000000000000001762 213.0
BYDH3_k127_5860997_3 Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK) K02548 - 2.5.1.74 0.000000000000000000000000000000000000000000000000000000000002041 220.0
BYDH3_k127_5860997_4 prohibitin homologues - - - 0.000000000000000000000000000000000000000000000000000004445 201.0
BYDH3_k127_5860997_5 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.000000000000001612 84.0
BYDH3_k127_589053_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005978 482.0
BYDH3_k127_5923375_0 malate dehydrogenase (menaquinone) activity K00111 - 1.1.5.3 4.719e-236 737.0
BYDH3_k127_5923375_1 ATP-grasp domain K01903 - 6.2.1.5 6.516e-219 682.0
BYDH3_k127_5923375_2 4-hydroxyphenylacetate 3-hydroxylase C terminal K00483 - 1.14.14.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002064 542.0
BYDH3_k127_5923375_3 FCD - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000147 387.0
BYDH3_k127_5923375_4 pyridine nucleotide-disulfide oxidoreductase - - - 0.000000000000000000000000000000000002363 138.0
BYDH3_k127_5923375_5 CoA-ligase K01902 - 6.2.1.5 0.00000000007678 62.0
BYDH3_k127_5933393_0 Pyridine nucleotide-disulphide oxidoreductase, dimerisation - - - 2.929e-214 678.0
BYDH3_k127_5933393_1 AMP-binding enzyme C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000001347 226.0
BYDH3_k127_5936772_0 2Fe-2S iron-sulfur cluster binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001799 301.0
BYDH3_k127_5936772_1 O-methyltransferase K03183 - 2.1.1.163,2.1.1.201 0.0000000000000000000000000000000000000000000000000000000000009698 216.0
BYDH3_k127_5946480_0 Carbamoyl-phosphate synthetase large chain, oligomerisation K01955 - 6.3.5.5 5.697e-320 985.0
BYDH3_k127_5946480_1 TIGRFAM Ammonium transporter K03320 - - 0.0000000002863 62.0
BYDH3_k127_6013967_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 GO:0003674,GO:0003824,GO:0004812,GO:0004829,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006435,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.3 8.072e-255 794.0
BYDH3_k127_6013967_1 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002132 360.0
BYDH3_k127_6013967_2 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0006996,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016043,GO:0019538,GO:0022411,GO:0032790,GO:0032984,GO:0032988,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903008 - 0.00000000000000000000000000000000000000000000000000007639 192.0
BYDH3_k127_6013967_3 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015934,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042273,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.00000000000000000000000000000000000000001098 156.0
BYDH3_k127_6013967_4 Ribosomal protein L35 K02916 - - 0.0000000000000005078 79.0
BYDH3_k127_6021478_0 Belongs to the methyltransferase superfamily K07444,K12297 - 2.1.1.173,2.1.1.264 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002188 426.0
BYDH3_k127_6021478_1 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.0000000000000001651 82.0
BYDH3_k127_602957_0 PFAM Aminotransferase class I and II K10206,K14261 - 2.6.1.83 3.024e-197 620.0
BYDH3_k127_602957_1 Elongation factor Tu domain 2 K06207 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000008689 259.0
BYDH3_k127_6050121_0 HDOD domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001714 292.0
BYDH3_k127_6050121_1 Domain of unknown function (DUF362) K07138 - - 0.0000000000000000000000000000000000000000000000000000004606 195.0
BYDH3_k127_6050121_2 Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis K03411 - 3.5.1.44 0.0000000135 62.0
BYDH3_k127_607788_0 succinate dehydrogenase - - - 0.0000000000000000000000000000000000000000001615 164.0
BYDH3_k127_607788_1 FAD dependent oxidoreductase K00244 - 1.3.5.4 0.00000000000000001757 95.0
BYDH3_k127_607788_2 Ferredoxin - GO:0003674,GO:0003824,GO:0005488,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009987,GO:0016491,GO:0022900,GO:0044237,GO:0048037,GO:0051536,GO:0051539,GO:0051540,GO:0055114 - 0.00000000493 62.0
BYDH3_k127_6112186_0 TIGRFAM tryptophanyl-tRNA synthetase K01867 - 6.1.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002058 450.0
BYDH3_k127_6112186_1 tRNA nucleotidyltransferase poly(A) polymerase K00974 - 2.7.7.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005928 324.0
BYDH3_k127_6112186_2 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.00000000000000000000000000000000113 132.0
BYDH3_k127_611881_0 Peptidase family M20/M25/M40 K01439 - 3.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002002 423.0
BYDH3_k127_611881_1 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001178 388.0
BYDH3_k127_611881_2 PFAM Beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007903 300.0
BYDH3_k127_6129017_0 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000004786 244.0
BYDH3_k127_6129017_2 - - - - 0.000000005864 62.0
BYDH3_k127_6132085_0 AAA domain K02450 - - 0.00000000000000000000000000000000000000000000000000000000000000000249 246.0
BYDH3_k127_6132085_1 - - - - 0.000001657 59.0
BYDH3_k127_616627_0 4Fe-4S dicluster domain - - - 1.053e-234 731.0
BYDH3_k127_616627_1 Electron transfer flavoprotein, alpha subunit K03522 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002373 524.0
BYDH3_k127_616627_2 Electron transfer flavoprotein domain K03521 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001356 385.0
BYDH3_k127_6171185_0 Transport of potassium into the cell K03549 GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0008150,GO:0008324,GO:0009987,GO:0015075,GO:0015077,GO:0015079,GO:0015318,GO:0015672,GO:0016020,GO:0022857,GO:0022890,GO:0030001,GO:0034220,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0071804,GO:0071805,GO:0098655,GO:0098660,GO:0098662 - 1.201e-235 741.0
BYDH3_k127_6171185_1 OmpA family K02557 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005863 301.0
BYDH3_k127_6171185_2 PFAM MotA TolQ ExbB proton channel K02556 - - 0.000000000000000000000000000000000000000000000000000003738 192.0
BYDH3_k127_6186468_0 Lytic transglycosylase catalytic K08307 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001483 427.0
BYDH3_k127_6192564_0 PFAM MltA K08304 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001363 361.0
BYDH3_k127_6192564_1 Major Facilitator Superfamily - - - 0.0000000009727 62.0
BYDH3_k127_620948_0 Acetyl-coenzyme A transporter 1 K08218 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001415 499.0
BYDH3_k127_620948_1 Histidine kinase - - - 0.0000000000000000000000001817 108.0
BYDH3_k127_6226508_0 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by K00053 - 1.1.1.86 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001406 561.0
BYDH3_k127_6226508_1 Belongs to the glycosyl hydrolase family 6 K01179 - 3.2.1.4 0.00000000000000000000000000000000000000000004475 172.0
BYDH3_k127_6226508_2 TIGRFAM acetolactate synthase, small subunit K01653 - 2.2.1.6 0.00000000000000000000000000000003561 126.0
BYDH3_k127_6226508_3 GDSL-like Lipase/Acylhydrolase - - - 0.00000000000000000000002942 111.0
BYDH3_k127_6284661_0 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03110 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005883 369.0
BYDH3_k127_6284661_1 Required for chromosome condensation and partitioning K03529 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002891 380.0
BYDH3_k127_6297138_0 Carbohydrate-binding domain-containing protein Cthe_2159 - GO:0001871,GO:0003674,GO:0005488,GO:0005509,GO:0030246,GO:0030247,GO:0030248,GO:0043167,GO:0043169,GO:0046872,GO:0048028,GO:2001062 - 0.00000000000000000000000000000000000000000000000000000000002158 214.0
BYDH3_k127_6297138_1 - - - - 0.000000000000000000000000000000000007913 140.0
BYDH3_k127_6297138_2 nUDIX hydrolase K03574,K03575 - 3.6.1.55 0.0000000000000000000000000000000005219 135.0
BYDH3_k127_6297138_3 Tetratricopeptide repeat - - - 0.000000008572 68.0
BYDH3_k127_6304896_0 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain K00261 - 1.4.1.3 0.0000000000000000000000000000000000000000000000001058 191.0
BYDH3_k127_6304896_1 peptidyl-tyrosine sulfation - - - 0.000000000000000000001333 99.0
BYDH3_k127_6397089_0 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003276 362.0
BYDH3_k127_6397089_1 Responsible for synthesis of pseudouridine from uracil K06180 GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022613,GO:0031118,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 5.4.99.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007535 303.0
BYDH3_k127_6397089_2 CarD-like/TRCF domain K07736 - - 0.000000000000000000000000000000000000000000000000000000000000003073 220.0
BYDH3_k127_6397089_3 pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for K15987 - 3.6.1.1 0.0000000000000000000000000000000005728 132.0
BYDH3_k127_6400940_0 PFAM NADH flavin oxidoreductase NADH oxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005884 512.0
BYDH3_k127_6400940_1 Protein of unknown function (DUF1329) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004208 484.0
BYDH3_k127_6400940_2 Protein of unknown function (DUF1302) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005903 452.0
BYDH3_k127_6400940_3 aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 0.00000000000000000000000000000000000002516 151.0
BYDH3_k127_6414310_0 Creatinase/Prolidase N-terminal domain K01262 - 3.4.11.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004033 323.0
BYDH3_k127_6414310_1 Tyrosine recombinase XerD K03733,K04763 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000282 310.0
BYDH3_k127_6414310_2 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000004791 139.0
BYDH3_k127_645030_0 NADH flavin oxidoreductase NADH oxidase - - - 0.0000000000000000000000000000000000000000000000000000000000000007476 243.0
BYDH3_k127_645030_1 acyl-CoA thioester hydrolase, YbgC YbaW family K07107 - - 0.00000000000000000000000000000000000000001323 156.0
BYDH3_k127_645030_2 PFAM histidine kinase, HAMP region domain protein - - - 0.0000000000000000005916 98.0
BYDH3_k127_645030_3 CDP-alcohol phosphatidyltransferase K08744 - 2.7.8.41 0.000000001973 65.0
BYDH3_k127_6456309_0 PFAM histone deacetylase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005217 347.0
BYDH3_k127_6456309_1 Putative nucleotidyltransferase substrate binding domain K07182 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001883 300.0
BYDH3_k127_6477600_0 Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit K01039 - 2.8.3.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000108 392.0
BYDH3_k127_6477600_1 nucleoside 2-deoxyribosyltransferase - GO:0003674,GO:0003824,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009123,GO:0009125,GO:0009159,GO:0009162,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0070694,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 - 0.00000000000000000000000000000000000000001926 159.0
BYDH3_k127_6477600_2 Coenzyme A transferase K01039 - 2.8.3.12 0.00000000000000000000000000000000000000008417 154.0
BYDH3_k127_6477600_3 PFAM Coenzyme A transferase K01040 - 2.8.3.12 0.0000000000000000000000000000000000000002053 152.0
BYDH3_k127_6477600_4 Transposase zinc-ribbon domain K07488 - - 0.000000000000000000000000000000000004864 140.0
BYDH3_k127_6486292_0 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001089 389.0
BYDH3_k127_6486292_1 Peptidoglycan polymerase that is essential for cell division K03588 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001102 348.0
BYDH3_k127_6486292_2 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000149 331.0
BYDH3_k127_6486292_3 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.00000000000000000000000000000000000000000000000000000000000001146 217.0
BYDH3_k127_6497428_0 anaerobic ribonucleoside-triphosphate reductase K21636 - 1.1.98.6 4.925e-301 928.0
BYDH3_k127_6497428_1 anaerobic ribonucleoside-triphosphate reductase K21636 - 1.1.98.6 0.0000000000000000000000000000000000000000000000000000000000000000000000007287 247.0
BYDH3_k127_6497428_2 TIGRFAM anaerobic ribonucleoside-triphosphate reductase activating protein K04069 - 1.97.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000254 241.0
BYDH3_k127_6509484_0 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03106 - 3.6.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002672 407.0
BYDH3_k127_6509484_1 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 GO:0003674,GO:0003824,GO:0003909,GO:0003911,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016874,GO:0016886,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 6.5.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000001041 258.0
BYDH3_k127_6571162_0 Oxidoreductase NAD-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007714 482.0
BYDH3_k127_6571162_1 4Fe-4S dicluster domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001404 425.0
BYDH3_k127_6571162_2 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006834 327.0
BYDH3_k127_6571162_3 PilZ domain - - - 0.000000000001929 73.0
BYDH3_k127_6573618_0 PFAM DAHP synthetase I K03856,K04516 - 2.5.1.54,5.4.99.5 0.00000000000000000000000000001132 120.0
BYDH3_k127_6583721_0 Belongs to the thiolase family K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002386 375.0
BYDH3_k127_6583721_1 Enoyl-CoA hydratase/isomerase - - - 0.0000000000000000000000000000000000000000000000002316 180.0
BYDH3_k127_6583721_2 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000504 174.0
BYDH3_k127_6593202_0 SMART Elongator protein 3 MiaB NifB - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004864 463.0
BYDH3_k127_6593202_1 B12 binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003661 422.0
BYDH3_k127_6606129_0 Protein of unknown function (DUF933) K06942 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001239 332.0
BYDH3_k127_6606129_1 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001045 316.0
BYDH3_k127_6606129_2 General secretory system II protein E domain protein - - - 0.000000007352 56.0
BYDH3_k127_6610046_0 succinate dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002745 272.0
BYDH3_k127_6624928_0 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002276 443.0
BYDH3_k127_6624928_1 PFAM ABC-2 type transporter K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002005 365.0
BYDH3_k127_6667975_0 PFAM sigma-54 factor interaction domain-containing protein K02584,K12266 - - 0.000000000000000000000000000000000000000000000000000000000002759 213.0
BYDH3_k127_6667975_1 Argininosuccinate lyase C-terminal K01755 GO:0003674,GO:0003824,GO:0004056,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016829,GO:0016840,GO:0016842,GO:0019752,GO:0042450,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.3.2.1 0.0000000000000000000000000000000000000000000000000000003246 196.0
BYDH3_k127_6667975_2 AsmA-like C-terminal region - - - 0.00000000000000000000000000000000000000001945 168.0
BYDH3_k127_6688711_0 leucine import across plasma membrane K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009133 357.0
BYDH3_k127_6688711_1 ABC transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003058 331.0
BYDH3_k127_6701848_0 TIGRFAM Ammonium transporter K03320 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007606 573.0
BYDH3_k127_6701848_1 Peptidase C26 K01951 - 6.3.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007934 275.0
BYDH3_k127_6701848_2 - - - - 0.0000000000000000000000000000000000000000000000000002063 194.0
BYDH3_k127_6701848_3 Belongs to the P(II) protein family K04751 GO:0003674,GO:0006808,GO:0008150,GO:0030234,GO:0050789,GO:0050790,GO:0065007,GO:0065009,GO:0098772 - 0.000000000000000000000000000000000000000000002239 166.0
BYDH3_k127_6738684_0 Rhomboid family K07059 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000272 351.0
BYDH3_k127_6738684_1 repeat-containing protein - - - 0.0000000000000000000000000000000000078 157.0
BYDH3_k127_6755989_0 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K07277 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004278 581.0
BYDH3_k127_6755989_1 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 GO:0003674,GO:0003824,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016740,GO:0016746,GO:0016747,GO:0019637,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.3.1.191 0.0000000000000000000000000000000000000002474 156.0
BYDH3_k127_6755989_2 PFAM Outer membrane K06142 - - 0.000000000000000002031 93.0
BYDH3_k127_6763793_0 NADH flavin oxidoreductase NADH oxidase - - - 0.0000000000000000000000000000003931 139.0
BYDH3_k127_6768009_0 Belongs to the citrate synthase family K01647 - 2.3.3.1 2.78e-198 622.0
BYDH3_k127_6768009_1 TIGRFAM Diguanylate cyclase K13590 - 2.7.7.65 0.00000000000006866 83.0
BYDH3_k127_6785272_0 Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002624 384.0
BYDH3_k127_6785272_1 Universal stress protein family - - - 0.000000000000000000000000000000000005617 141.0
BYDH3_k127_6785272_2 Protein of unknown function (DUF2914) - - - 0.000000000000000000000000000001287 127.0
BYDH3_k127_6833864_0 binding domain protein K07138 - - 0.00000000000000000000000000000000000000000000000000000001419 202.0
BYDH3_k127_6833864_1 PFAM 4Fe-4S ferredoxin iron-sulfur binding domain protein K07138 - - 0.000000000000000000000000000000000000000000000000000004622 194.0
BYDH3_k127_6833864_2 COG0591 Na proline symporter - - - 0.0000004103 60.0
BYDH3_k127_686002_0 PFAM Acetyl-CoA hydrolase transferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003367 614.0
BYDH3_k127_686002_1 PFAM CoA-binding domain protein K01905,K22224 - 6.2.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007446 334.0
BYDH3_k127_6860795_0 General secretory system II protein E domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000006883 238.0
BYDH3_k127_6860795_1 Type IV minor pilin ComP, DNA uptake sequence receptor K02655 - - 0.0000004792 57.0
BYDH3_k127_6879773_0 enoyl-CoA hydratase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007762 313.0
BYDH3_k127_6879773_1 Putative RNA methylase family UPF0020 K07444 - - 0.000000000000000009701 88.0
BYDH3_k127_688089_0 Uroporphyrinogen decarboxylase (URO-D) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006884 280.0
BYDH3_k127_688089_1 Protein of unknown function (DUF1232) - - - 0.00000000000000003088 83.0
BYDH3_k127_688089_2 - - - - 0.0000000001637 68.0
BYDH3_k127_6881678_0 PFAM tRNA synthetases class II (D, K and N) K01893 - 6.1.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002156 605.0
BYDH3_k127_6881678_1 Multidrug transporter MatE - - - 0.00000000000000000009498 94.0
BYDH3_k127_6883550_0 Glycosyltransferase Family 4 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002621 387.0
BYDH3_k127_6883550_1 PFAM glycosyl transferase family 9 K02841 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001279 250.0
BYDH3_k127_6883550_2 D,D-heptose 1,7-bisphosphate phosphatase K03273 - 3.1.3.82,3.1.3.83 0.0000000000000000000000000000000000000000000000000000000000000004372 224.0
BYDH3_k127_6891691_0 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140101,GO:0140102,GO:1901360 2.1.1.192 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000584 370.0
BYDH3_k127_6891691_1 Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP K01496,K11755 - 3.5.4.19,3.6.1.31 0.00000000000000000000000000000000000000000000000002279 184.0
BYDH3_k127_6921902_0 PFAM TRAP C4-dicarboxylate transport system permease DctM subunit - - - 0.00000000000000000000000000000000000000000000000000003025 196.0
BYDH3_k127_6921902_1 SMP-30/Gluconolaconase/LRE-like region K02352 - - 0.0000000002549 66.0
BYDH3_k127_6921902_2 COG4665 TRAP-type mannitol chloroaromatic compound transport system, small permease component - - - 0.00002046 53.0
BYDH3_k127_6930699_0 Belongs to the CinA family K03742,K03743 - 3.5.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002768 518.0
BYDH3_k127_6930699_1 XdhC and CoxI family K07402 - - 0.00000000000000000000000000000000000000000000003485 177.0
BYDH3_k127_6965628_0 two component, sigma54 specific, transcriptional regulator, Fis family K13599 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009906 394.0
BYDH3_k127_6965628_1 Necessary for normal cell division and for the maintenance of normal septation K03978 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000002232 211.0
BYDH3_k127_6965628_2 diguanylate cyclase K02488 - 2.7.7.65 0.00000000000000004573 91.0
BYDH3_k127_6974835_0 Acetyl-CoA carboxylase carboxyltransferase component (subunits alpha and beta) K01615 - 4.1.1.70 3.035e-306 945.0
BYDH3_k127_6974835_1 acyl-CoA dehydrogenase K16173 - 1.3.99.32 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006699 523.0
BYDH3_k127_6974835_2 PFAM Acyl-CoA dehydrogenase K16173 - 1.3.99.32 0.0000000000308 63.0
BYDH3_k127_6981192_0 PFAM ABC transporter K01990,K01992,K09695 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001577 356.0
BYDH3_k127_6981192_1 ABC transporter K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002919 322.0
BYDH3_k127_6981192_2 HlyD family secretion protein K01993 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001993 296.0
BYDH3_k127_6981192_3 PFAM ABC-2 type transporter K01992 - - 0.000171 44.0
BYDH3_k127_6995700_0 Putative ATP-binding cassette K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001782 386.0
BYDH3_k127_6995700_1 PFAM ABC transporter related K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002186 289.0
BYDH3_k127_6995700_2 SMART phosphoesterase PHP domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000006779 251.0
BYDH3_k127_6995700_3 PFAM transglutaminase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002486 263.0
BYDH3_k127_6995700_4 SMART phosphoesterase PHP domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000001414 234.0
BYDH3_k127_6995700_5 Bifunctional nuclease K08999 - - 0.000000000000000000000000000000000000000000000000000000001898 203.0
BYDH3_k127_6995700_6 OmpA family K02557 - - 0.0000000911 59.0
BYDH3_k127_7025935_0 Cytochrome c7 and related cytochrome c - - - 0.00000000000000000000000000000000000000000000000000000000000000000007677 239.0
BYDH3_k127_7025935_1 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K08357 - - 0.000000000000000000000000000000000000000000000000008635 184.0
BYDH3_k127_7025935_2 Maf-like protein K06287 - - 0.0000000000001705 71.0
BYDH3_k127_7033610_0 NADH:flavin oxidoreductase / NADH oxidase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002453 274.0
BYDH3_k127_7033610_1 CoA binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000007942 222.0
BYDH3_k127_7033610_2 CoA-binding domain protein K01905,K22224 - 6.2.1.13 0.0000007238 51.0
BYDH3_k127_7043867_0 Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity K06188 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001067 407.0
BYDH3_k127_7043867_1 Bacterial regulatory protein, Fis family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001149 324.0
BYDH3_k127_7043867_2 histidine kinase A domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000001168 258.0
BYDH3_k127_7043867_3 - - - - 0.00000000000000000000000000000000000000000000000000000000972 213.0
BYDH3_k127_7043867_4 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000217 175.0
BYDH3_k127_7043867_5 cheY-homologous receiver domain - - - 0.0000000000000000000000002427 110.0
BYDH3_k127_7055176_0 Aldehyde ferredoxin oxidoreductase, N-terminal domain K03738,K19515 - 1.2.7.5 0.0 1129.0
BYDH3_k127_7055176_1 4fe-4S ferredoxin, iron-sulfur binding domain protein K19516 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007594 319.0
BYDH3_k127_7055176_2 4Fe-4S dicluster domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002808 302.0
BYDH3_k127_7078995_0 TIGRFAM reductive dehalogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001287 359.0
BYDH3_k127_7078995_1 PFAM TM2 domain - - - 0.000000000000000000000000000006098 122.0
BYDH3_k127_7078995_2 PFAM TM2 domain - - - 0.000000000000000000000001225 104.0
BYDH3_k127_7078995_3 TIGRFAM phosphodiesterase, MJ0936 family K07095 - - 0.000004993 55.0
BYDH3_k127_7080339_0 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 2.772e-203 646.0
BYDH3_k127_7080339_1 CobQ CobB MinD ParA nucleotide binding domain K03496 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001403 304.0
BYDH3_k127_7080339_2 PFAM ParB domain protein nuclease K03497 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004781 267.0
BYDH3_k127_7080339_3 Domain of unknown function (DUF3842) - - - 0.00000000000000000000000000000000000000003248 156.0
BYDH3_k127_7080339_4 Belongs to the peptidase S16 family K01338,K04076,K04770 - 3.4.21.53 0.00000000000000000000000000000000000001251 147.0
BYDH3_k127_7080339_5 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000000000756 103.0
BYDH3_k127_709660_0 4-hydroxyphenylacetate 3-hydroxylase C terminal K00483,K14534 - 1.14.14.9,4.2.1.120,5.3.3.3 1.152e-307 945.0
BYDH3_k127_709660_1 NADPH-dependent FMN reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002554 458.0
BYDH3_k127_709660_2 PFAM fumarate reductase succinate dehydrogenase flavoprotein domain protein K00244 - 1.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000003599 264.0
BYDH3_k127_709660_3 PFAM MarR family - - - 0.0000000000000000000000000007444 119.0
BYDH3_k127_7114964_0 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006978 440.0
BYDH3_k127_7114964_1 PFAM Pyruvate kinase, alpha beta domain K09126 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001862 292.0
BYDH3_k127_7114964_2 FAD dependent oxidoreductase K00239,K00244 - 1.3.5.1,1.3.5.4 0.000001522 51.0
BYDH3_k127_7155316_0 TIGRFAM Arginyl-tRNA synthetase K01887 GO:0003674,GO:0003824,GO:0004812,GO:0004814,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006420,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000402 497.0
BYDH3_k127_7155316_1 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002975 293.0
BYDH3_k127_7155316_2 Acetyltransferase (GNAT) domain K00619 - 2.3.1.1 0.00000000000000000000000000000000000000000000000003102 186.0
BYDH3_k127_7155316_3 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116,K03117 - - 0.0000000000001341 75.0
BYDH3_k127_7155316_4 Sporulation related domain K03749 - - 0.000002731 57.0
BYDH3_k127_7156394_0 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.000000000000000000000000000000000000000000000000000000000000004591 221.0
BYDH3_k127_7156394_1 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K05807 - - 0.00000000000000000000000000000000000000000000001527 179.0
BYDH3_k127_7156394_2 Belongs to the thioredoxin family K03671 - - 0.00000000000000000000000000000000000001493 146.0
BYDH3_k127_7193724_0 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain K00134 - 1.2.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003496 445.0
BYDH3_k127_7193724_1 Belongs to the UPF0296 family K09777 - - 0.000000000000000000000000000001357 123.0
BYDH3_k127_7200029_0 TIGRFAM DNA protecting protein DprA K04096 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000904 329.0
BYDH3_k127_7200029_1 Lysin motif - - - 0.0000000000000001672 89.0
BYDH3_k127_7209972_0 NADH flavin oxidoreductase NADH oxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000209 544.0
BYDH3_k127_7209972_1 NADH flavin oxidoreductase NADH oxidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002548 352.0
BYDH3_k127_7256086_0 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000006656 271.0
BYDH3_k127_7256086_1 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.00000000000000000000000000000000000008839 142.0
BYDH3_k127_7309109_0 Pyruvate phosphate dikinase, PEP K01006 - 2.7.9.1 4.236e-224 708.0
BYDH3_k127_7309109_1 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000373 592.0
BYDH3_k127_7309109_2 Pyruvate phosphate dikinase, PEP K01006 - 2.7.9.1 0.0000000000000000000000000000000000000000000000000000000248 201.0
BYDH3_k127_7310545_0 TIGRFAM carbon-monoxide dehydrogenase, catalytic subunit K00198 - 1.2.7.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008009 379.0
BYDH3_k127_7310545_1 Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides K11065 - 1.11.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000006034 246.0
BYDH3_k127_7310545_2 PFAM Desulfoferrodoxin ferrous iron-binding region K05919 - 1.15.1.2 0.00000000000000000000000000000000000000000000000000000000000001831 217.0
BYDH3_k127_7310545_3 Flavodoxin domain - - - 0.000000000000000000000000000000000000000000000000000000000513 204.0
BYDH3_k127_7310545_4 - - - - 0.000000000000000000000004576 103.0
BYDH3_k127_7310545_5 - - - - 0.000000000000000000003958 95.0
BYDH3_k127_7316606_0 ABC-type transport system involved in lipoprotein release permease component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002179 507.0
BYDH3_k127_7316606_1 non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005707 327.0
BYDH3_k127_7316606_3 MacB-like periplasmic core domain - - - 0.00003317 47.0
BYDH3_k127_7419003_0 Belongs to the DEAD box helicase family K03732 - 3.6.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003327 479.0
BYDH3_k127_7419003_1 - - - - 0.00000009437 57.0
BYDH3_k127_7419691_0 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region K00124,K00335,K05587,K18331 - 1.12.1.3,1.6.5.3 2.233e-247 771.0
BYDH3_k127_7419691_1 formate dehydrogenase (NAD+) activity K00123,K00336 - 1.17.1.9,1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000378 247.0
BYDH3_k127_7419691_2 S-adenosylmethionine decarboxylase K01611 - 4.1.1.50 0.000006727 48.0
BYDH3_k127_7429238_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003249 492.0
BYDH3_k127_7429238_1 Proton-conducting membrane transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002166 287.0
BYDH3_k127_7429238_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000002787 259.0
BYDH3_k127_7429238_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338,K05580 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000001762 213.0
BYDH3_k127_7429238_4 PFAM NADH-ubiquinone plastoquinone oxidoreductase chain 6 K00339 - 1.6.5.3 0.000000000000000000000000000000000000000000000000001415 188.0
BYDH3_k127_7429238_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340,K05576 - 1.6.5.3 0.000000000000000000000000000000000000007006 148.0
BYDH3_k127_7445537_0 PFAM Radical SAM domain protein K22226 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001596 379.0
BYDH3_k127_7445537_1 Belongs to the ClpX chaperone family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002925 327.0
BYDH3_k127_7456094_0 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0008144,GO:0019842,GO:0030170,GO:0036094,GO:0043167,GO:0043168,GO:0044464,GO:0048037,GO:0050662,GO:0070279,GO:0097159,GO:1901363 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000713 275.0
BYDH3_k127_7456094_1 PP-loop family K14058 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001763 275.0
BYDH3_k127_7456094_2 PDZ DHR GLGF domain protein K04771 - 3.4.21.107 0.0000000000000000000004176 106.0
BYDH3_k127_7456094_3 - - - - 0.000000000000001586 79.0
BYDH3_k127_7459966_0 acyl-CoA dehydrogenase K09456 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000008727 263.0
BYDH3_k127_7459966_1 PFAM Acyl-CoA dehydrogenase K09456 - - 0.0000000000000000000000000000000000000000000000005719 178.0
BYDH3_k127_7459966_2 PFAM Acyl-CoA dehydrogenase K09456 - - 0.00000000000000002589 87.0
BYDH3_k127_7459966_3 Protein involved in receptor activity and transport K02014 - - 0.0000151 51.0
BYDH3_k127_7474595_0 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000714 344.0
BYDH3_k127_7474595_1 Short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008501 302.0
BYDH3_k127_7474595_2 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 GO:0000035,GO:0000036,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008289,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016053,GO:0019637,GO:0019752,GO:0019842,GO:0031177,GO:0032787,GO:0033218,GO:0036094,GO:0042221,GO:0042493,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044620,GO:0046394,GO:0046467,GO:0046493,GO:0048037,GO:0050896,GO:0051192,GO:0071704,GO:0072330,GO:0072341,GO:0090407,GO:0140104,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 - 0.000000000000000000000000522 106.0
BYDH3_k127_7474595_3 Uncharacterized ACR, COG1399 K07040 - - 0.000000000000000000000006545 106.0
BYDH3_k127_7474595_4 structural constituent of ribosome K02911 GO:0003674,GO:0003735,GO:0005198 - 0.000000000000000001448 86.0
BYDH3_k127_7483550_0 NADH:flavin oxidoreductase / NADH oxidase family - - - 0.0000000001011 74.0
BYDH3_k127_7517081_0 Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB K02454,K02652 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001906 434.0
BYDH3_k127_7517081_1 Type 4 fimbrial assembly protein pilC K02455,K02653 - - 0.00000000000000000000000000000000000000000000000000000000000000001835 239.0
BYDH3_k127_7517081_2 Type II secretion system (T2SS), protein G K02456 - - 0.00000000000000000000000000000003001 134.0
BYDH3_k127_7552941_0 MaoC like domain - - - 0.000000000000002894 85.0
BYDH3_k127_7552941_1 Flavodoxin domain - - - 0.000000000008137 74.0
BYDH3_k127_7572560_0 Radical SAM domain protein - - - 0.000000002985 57.0
BYDH3_k127_7572560_1 LysM domain - - - 0.00000008801 64.0
BYDH3_k127_7579127_0 PFAM Glutamine synthetase, catalytic domain K01915 - 6.3.1.2 1.038e-237 741.0
BYDH3_k127_7579127_1 [glutamate-ammonia-ligase] adenylyltransferase activity K00982 GO:0000820,GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006521,GO:0008150,GO:0008882,GO:0010565,GO:0016020,GO:0016740,GO:0016772,GO:0016779,GO:0019222,GO:0030312,GO:0031323,GO:0033238,GO:0040007,GO:0042221,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0060359,GO:0062012,GO:0065007,GO:0070566,GO:0071944,GO:0080090,GO:1901698 2.7.7.42,2.7.7.89 1.573e-217 704.0
BYDH3_k127_7579127_2 CHASE4 domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005742 319.0
BYDH3_k127_7579127_3 BON domain - - - 0.00000000003359 67.0
BYDH3_k127_7593713_0 aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003331 369.0
BYDH3_k127_7593713_1 hmm pf01266 K00244 - 1.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001595 299.0
BYDH3_k127_7618545_0 PFAM Pyridine nucleotide-disulphide oxidoreductase K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 2.405e-237 745.0
BYDH3_k127_7618545_1 Pyridine nucleotide-disulphide oxidoreductase K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003968 436.0
BYDH3_k127_7618545_2 PFAM Amidohydrolase 2 K03392,K07045 - 4.1.1.45 0.0000000000000000001405 91.0
BYDH3_k127_7670070_0 Belongs to the RtcB family K14415 - 6.5.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001536 441.0
BYDH3_k127_7670070_1 PD-(D/E)XK nuclease superfamily - - - 0.000000177 58.0
BYDH3_k127_7693459_0 COG0666 FOG Ankyrin repeat K06867 - - 0.00000000000000000000000000000000000000000005523 168.0
BYDH3_k127_7693459_1 NADH flavin oxidoreductase NADH oxidase - - - 0.000000000000000000000000001083 114.0
BYDH3_k127_7733972_0 Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates K00179 - 1.2.7.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001255 364.0
BYDH3_k127_7733972_1 TIGRFAM DNA protecting protein DprA K04096 - - 0.000000000000000000000000000002076 126.0
BYDH3_k127_7758307_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 3.152e-256 799.0
BYDH3_k127_7758307_1 metalloendopeptidase activity K11749 GO:0008150,GO:0040007 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002886 334.0
BYDH3_k127_7758307_2 4 iron, 4 sulfur cluster binding K00124 - - 0.00000000000000000000000000000000000000000000000000000001731 201.0
BYDH3_k127_7758307_3 - - - - 0.0000000000000001646 88.0
BYDH3_k127_7759040_0 NADH oxidase - - - 0.0000000000000000000000000000000000000000000000003028 196.0
BYDH3_k127_7759040_1 Flavodoxin domain - - - 0.00000001934 63.0
BYDH3_k127_7776044_0 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000878 533.0
BYDH3_k127_7776044_1 Outer membrane protein transport protein (OMPP1/FadL/TodX) K06076 - - 0.000000000000000000000000000000000000000000000000000000001613 211.0
BYDH3_k127_7776044_2 Outer membrane protein transport protein (OMPP1/FadL/TodX) K06076 - - 0.0000000000000000000000000000000000000006005 153.0
BYDH3_k127_7776044_3 Belongs to the sulfur carrier protein TusA family K04085 - - 0.0000000000000000006171 87.0
BYDH3_k127_7776044_4 PFAM Nitrate reductase gamma subunit - - - 0.000000001629 67.0
BYDH3_k127_7792668_0 Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation K02394 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004468 286.0
BYDH3_k127_7792668_1 Rod binding protein K21471 - - 0.0000000000000000000000000000000000000001868 160.0
BYDH3_k127_7792668_2 TIGRFAM flagellar hook-associated protein FlgK K02396 - - 0.0000000000000000008849 89.0
BYDH3_k127_7818059_0 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 1.476e-235 754.0
BYDH3_k127_7818059_1 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 - 5.4.99.25 0.000000000000000000000000000000000000000000000000000001661 200.0
BYDH3_k127_7818059_2 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.00000000000000000000000000007505 119.0
BYDH3_k127_7818059_3 Protein of unknown function (DUF503) K09764 - - 0.000000000000000000000002377 104.0
BYDH3_k127_7858743_0 Belongs to the multicopper oxidase YfiH RL5 family K05810 - - 0.00000000000000000000000000000000000000000000000000000000000000000002226 242.0
BYDH3_k127_7858743_1 Belongs to the bacterial histone-like protein family K05788 - - 0.00000000000000000000000000000000000000001137 154.0
BYDH3_k127_7902570_0 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004477 349.0
BYDH3_k127_7902570_1 Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH K02379 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004035 263.0
BYDH3_k127_7902570_2 PFAM MOSC domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000001439 232.0
BYDH3_k127_7902570_3 Domain of unknown function (DUF386) - - - 0.0000000000000000000000000000000000000000000000000000002266 197.0
BYDH3_k127_7902570_4 response regulator K09749 - - 0.0000000000000000000000000000000000000000000000001911 191.0
BYDH3_k127_7902570_5 cell redox homeostasis K03671 - - 0.0000000000000000000000000000003404 130.0
BYDH3_k127_7907866_0 Two component, sigma54 specific, transcriptional regulator, Fis family K07714 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004646 501.0
BYDH3_k127_7907866_1 Histidine kinase - - - 0.000000000000000000000000000000000000000000007231 171.0
BYDH3_k127_7907866_2 Histidine kinase - - - 0.00008661 46.0
BYDH3_k127_7920087_0 Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002229 390.0
BYDH3_k127_7920087_1 Thioesterase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000002112 213.0
BYDH3_k127_7920087_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000001057 125.0
BYDH3_k127_7955058_0 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001215 413.0
BYDH3_k127_7955058_1 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 GO:0000906,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.78 0.0000000000000000000000000000000000000000000000000000000000000000125 227.0
BYDH3_k127_7955058_2 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.000000000000000000000001416 107.0
BYDH3_k127_79625_1 fumarate reductase, flavoprotein subunit K00244 - 1.3.5.4 0.0000000000000000000000000000000006703 148.0
BYDH3_k127_79625_2 SnoaL-like domain - - - 0.00000000001145 68.0
BYDH3_k127_7967826_0 GXGXG motif - - - 5e-323 1010.0
BYDH3_k127_7967826_1 Carbamoyl-phosphate synthetase large chain, oligomerisation domain K01955 - 6.3.5.5 4.659e-205 643.0
BYDH3_k127_7967826_2 Belongs to the CarA family K01956 - 6.3.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004318 504.0
BYDH3_k127_7967826_3 Nitrogen regulatory protein P-II K04751 - - 0.0000000000000000000000000000000000000000000001201 170.0
BYDH3_k127_7967920_0 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000002106 212.0
BYDH3_k127_7967920_1 PFAM Lipid A 3-O-deacylase-related - - - 0.00000000000000000000000000000000000000000001427 171.0
BYDH3_k127_7967920_2 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.00000000000000003682 89.0
BYDH3_k127_7985630_0 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 4.565e-263 824.0
BYDH3_k127_7985630_1 Methyltransferase K06442 - 2.1.1.226,2.1.1.227 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000311 278.0
BYDH3_k127_7985630_2 Polyprenyl synthetase K00795,K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.0000000000000000000000000000000000000000000000000000000000000002743 226.0
BYDH3_k127_7985630_3 - - - - 0.000000000000000000000000000000008731 130.0
BYDH3_k127_8008197_0 Participates in both transcription termination and antitermination K02600 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000009167 283.0
BYDH3_k127_8008197_1 Required for maturation of 30S ribosomal subunits K09748 - - 0.0000000000000000000000000000000000000004763 154.0
BYDH3_k127_8025038_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008365 313.0
BYDH3_k127_8065030_0 adenosylhomocysteine nucleosidase activity K01243 - 3.2.2.9 0.000000000000000000000000000000000000000000000000000002459 199.0
BYDH3_k127_8065030_1 COG0457 FOG TPR repeat - - - 0.0000000000000000000000000000000000005429 156.0
BYDH3_k127_8077007_0 PFAM Bile acid sodium symporter K03325 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001782 392.0
BYDH3_k127_8077007_1 PFAM aldo keto reductase K07079 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000262 335.0
BYDH3_k127_8077007_2 Low molecular weight phosphotyrosine protein phosphatase K03741 - 1.20.4.1 0.000000000000000000000000000000000000000000000000001626 185.0
BYDH3_k127_8078736_0 radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005354 447.0
BYDH3_k127_8078736_1 Smr domain - - - 0.000000000000000000000000000000000000000002116 164.0
BYDH3_k127_8078736_2 TonB dependent receptor K16092 - - 0.00000007259 53.0
BYDH3_k127_811210_0 acetylesterase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002906 387.0
BYDH3_k127_811210_1 LysM domain K03642 GO:0005575,GO:0005623,GO:0009279,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0044462,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000001871 210.0
BYDH3_k127_8145122_0 Two component, sigma54 specific, transcriptional regulator, Fis family K11384 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000083 428.0
BYDH3_k127_8145122_1 TPR repeat - - - 0.00000000000000000000000000001079 124.0
BYDH3_k127_8145122_2 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K11383 - 2.7.13.3 0.000000000000000001465 89.0
BYDH3_k127_8153346_0 Belongs to the CarB family K01955 - 6.3.5.5 2.218e-292 910.0
BYDH3_k127_8194913_0 Succinate dehydrogenase fumarate reductase flavoprotein subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001635 332.0
BYDH3_k127_8194913_1 Flavodoxin domain - - - 0.0000000000000000000000000000000000811 150.0
BYDH3_k127_8194913_2 NADH flavin oxidoreductase NADH oxidase - - - 0.00000000000000000000000000000004413 134.0
BYDH3_k127_8194913_3 4 iron, 4 sulfur cluster binding K00176,K05524 - 1.2.7.3 0.00000000000000002285 82.0
BYDH3_k127_8194913_4 4Fe-4S dicluster domain - - - 0.0008829 51.0
BYDH3_k127_8202790_0 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000184 400.0
BYDH3_k127_8202790_1 COGs COG1639 signal transduction protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000001797 250.0
BYDH3_k127_8206550_0 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003055 522.0
BYDH3_k127_8206550_1 Patatin-like phospholipase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003478 461.0
BYDH3_k127_8206550_2 xanthine dehydrogenase activity K11178 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0008150,GO:0008152,GO:0016491,GO:0016903,GO:0036094,GO:0042597,GO:0043167,GO:0043168,GO:0044464,GO:0048037,GO:0050660,GO:0050662,GO:0055114,GO:0097159,GO:1901265,GO:1901363 1.17.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009625 334.0
BYDH3_k127_8339727_0 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004162 501.0
BYDH3_k127_8339727_1 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 GO:0003674,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001253 342.0
BYDH3_k127_8339727_2 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.00000000000000000000000000000000002972 141.0
BYDH3_k127_8341381_0 Prokaryotic N-terminal methylation motif K02456 - - 0.00000000000000000000000000000000000000000000000000000000001602 209.0
BYDH3_k127_8341381_1 Prokaryotic N-terminal methylation motif K02456 - - 0.000000000000000000000000000000000000000000000007444 175.0
BYDH3_k127_8341381_2 Type II and III secretion system protein K02453 - - 0.00000000000000000000000000000000001529 147.0
BYDH3_k127_835362_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000138 419.0
BYDH3_k127_835362_1 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell K03282 GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006884,GO:0008150,GO:0008361,GO:0008381,GO:0009987,GO:0009992,GO:0015267,GO:0016020,GO:0016021,GO:0016043,GO:0019725,GO:0022803,GO:0022836,GO:0022857,GO:0030104,GO:0031224,GO:0032535,GO:0042592,GO:0044425,GO:0048878,GO:0051179,GO:0051234,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0071840,GO:0090066 - 0.00000000000000000000000000000000000000000000000000002693 191.0
BYDH3_k127_835362_2 PFAM von Willebrand factor type A domain K03286 - - 0.00000000000000000000000000000000000000000000000000195 185.0
BYDH3_k127_8364394_0 Domain of unknown function (DUF4382) - - - 0.00000000000000001702 89.0
BYDH3_k127_8366607_0 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003338 537.0
BYDH3_k127_8366607_1 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.000000000000000000001336 100.0
BYDH3_k127_8366607_2 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 0.000000000004089 73.0
BYDH3_k127_8370272_0 Thiamine biosynthesis protein (ThiI) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002598 310.0
BYDH3_k127_8386302_0 Belongs to the UPF0178 family K09768 - - 0.000000000000000000000000000000000000000000000000000008685 193.0
BYDH3_k127_8386302_1 - - - - 0.0000000000000000000000000001853 118.0
BYDH3_k127_8386302_2 PFAM Pyridoxamine 5'-phosphate - - - 0.000000000000008051 76.0
BYDH3_k127_8386888_0 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 1.64e-213 672.0
BYDH3_k127_8386888_1 Ppx/GppA phosphatase family K01524 - 3.6.1.11,3.6.1.40 0.00000000000000005839 87.0
BYDH3_k127_8386888_2 Ppx/GppA phosphatase family K01524 - 3.6.1.11,3.6.1.40 0.00007138 47.0
BYDH3_k127_8418911_0 Domain of unknown function (DUF4126) - - - 0.0000000000000000000000000000000000000000000000000000000000000001177 228.0
BYDH3_k127_8418911_1 Acts as a magnesium transporter K06213 - - 0.000000000000000000000000000000000000000000000000000000000000002618 224.0
BYDH3_k127_8424189_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit K02118 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004624 551.0
BYDH3_k127_8424189_1 ATPase activity, coupled to transmembrane movement of substances K02120 - - 0.00000000000000000000000006811 115.0
BYDH3_k127_8424189_3 NADH flavin oxidoreductase NADH oxidase - - - 0.00003012 50.0
BYDH3_k127_8429296_0 Fructose-bisphosphate aldolase class-II K01624 - 4.1.2.13 1.105e-210 661.0
BYDH3_k127_8429296_1 nucleic acid binding OB-fold tRNA helicase-type K03698 - - 0.000000000000001062 82.0
BYDH3_k127_8429296_2 Belongs to the peptidase S51 family K05995 - 3.4.13.21 0.00001727 54.0
BYDH3_k127_8472067_0 Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction K02377 - 1.1.1.271 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004178 472.0
BYDH3_k127_8472067_1 Polysaccharide biosynthesis/export protein K01991 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000703 446.0
BYDH3_k127_8472067_2 PIN domain - - - 0.00000000000000000000000000004595 121.0
BYDH3_k127_8472067_3 Antitoxin component of a toxin-antitoxin (TA) module - - - 0.0000000000002995 73.0
BYDH3_k127_8487017_0 NADH flavin oxidoreductase NADH oxidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001144 268.0
BYDH3_k127_8487017_1 - - - - 0.00000000000000000000000000003924 126.0
BYDH3_k127_851024_0 Involved in the biosynthesis of the thiazole moiety of thiamine. Catalyzes the conversion of NAD and glycine to adenosine diphosphate 5-(2-hydroxyethyl)-4-methylthiazole-2-carboxylate (ADT), an adenylated thiazole intermediate, using free sulfide as a source of sulfur K03146 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004601 370.0
BYDH3_k127_8540273_0 General secretory system II protein E domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007036 402.0
BYDH3_k127_8563800_0 Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism K01012,K16180 - 2.8.1.6,5.4.99.58 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003453 394.0
BYDH3_k127_8563800_1 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00639,K00652 - 2.3.1.29,2.3.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000004531 256.0
BYDH3_k127_8563800_2 Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring K01935,K02169 GO:0003674,GO:0003824,GO:0004141,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0016882,GO:0017144,GO:0018130,GO:0019752,GO:0032787,GO:0034641,GO:0042364,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.1.197,6.3.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000002387 246.0
BYDH3_k127_8572185_0 TonB-dependent Receptor Plug K02014 - - 0.0000000000000000000000000000000000000000000000003625 184.0
BYDH3_k127_8572185_1 TonB dependent receptor K02014 - - 0.000000000000000000000000000000000000000003699 169.0
BYDH3_k127_8579720_0 Belongs to the peptidase S16 family K01338,K04076,K04770 - 3.4.21.53 9.772e-220 694.0
BYDH3_k127_8587311_0 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710 - 4.2.1.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001258 475.0
BYDH3_k127_8587311_1 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 - 1.1.1.133 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002218 367.0
BYDH3_k127_8587311_2 Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis K00973 - 2.7.7.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001544 312.0
BYDH3_k127_8587311_3 Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose K01790 - 5.1.3.13 0.000000000000000000000000000000000000000000000000000000000000000000000000009561 258.0
BYDH3_k127_8602271_0 PFAM Peptidoglycan-binding domain 1 protein K02450 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000009519 264.0
BYDH3_k127_8602271_1 General secretion pathway protein C K02452 - - 0.0000000000000000000000000000000000000000000000003695 187.0
BYDH3_k127_8602271_2 - - - - 0.000000000000000000000002086 113.0
BYDH3_k127_8602271_3 Type II secretion system (T2SS), protein M K02462 - - 0.000000000000000000008637 99.0
BYDH3_k127_8602271_4 Type IV pilus assembly protein PilM; K02461 - - 0.0000000000000006602 91.0
BYDH3_k127_8602271_5 AAA domain - - - 0.000000005384 58.0
BYDH3_k127_8616898_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006476 328.0
BYDH3_k127_8616898_1 NADPH-dependent FMN reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003649 291.0
BYDH3_k127_8616898_2 - - - - 0.0000000000000000000000000000000000000000000000000000694 190.0
BYDH3_k127_8616898_3 Protein of unknown function (DUF2892) - - - 0.00000008045 56.0
BYDH3_k127_8621493_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 4.704e-273 848.0
BYDH3_k127_8621493_1 cysteinyl-tRNA synthetase K01738,K01883,K12339 - 2.5.1.47,6.1.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003202 592.0
BYDH3_k127_8621493_2 Polysaccharide biosynthesis protein K01784 - 5.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000007414 268.0
BYDH3_k127_8621493_3 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 GO:0003674,GO:0005488,GO:0005515,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008150,GO:0009987,GO:0010033,GO:0035966,GO:0042221,GO:0043167,GO:0043169,GO:0046872,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0061077 - 0.0000000000000000000000000000000000000005352 151.0
BYDH3_k127_8621493_4 NAD dependent epimerase dehydratase family K01784 - 5.1.3.2 0.0000001246 53.0
BYDH3_k127_8627717_0 Outer membrane efflux protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003512 344.0
BYDH3_k127_8634537_0 transporter of a GTP-driven Fe(2 ) uptake system K04759 - - 2.432e-249 793.0
BYDH3_k127_8634537_1 Elongator protein 3, MiaB family, Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003156 419.0
BYDH3_k127_8634537_2 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K07642 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004618 315.0
BYDH3_k127_8634537_3 PFAM response regulator receiver K07657,K07663,K07664 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003141 291.0
BYDH3_k127_8634537_4 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.00000000000000000000000000000000000000000000000000009836 190.0
BYDH3_k127_8634537_5 - K07020,K18614 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009111,GO:0009987,GO:0016787,GO:0016810,GO:0016811,GO:0017144,GO:0034641,GO:0042365,GO:0042737,GO:0042802,GO:0042803,GO:0042816,GO:0042820,GO:0044237,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0046483,GO:0046700,GO:0046983,GO:0047411,GO:0071704,GO:0072524,GO:0072526,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575 3.5.1.29 0.000000000000000000000000000005104 125.0
BYDH3_k127_8634537_6 PFAM FeoA family protein K04758 - - 0.0000000001177 62.0
BYDH3_k127_8635361_0 BadF BadG BcrA BcrD - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004373 611.0
BYDH3_k127_8672928_0 Belongs to the DegT DnrJ EryC1 family K13010,K19715 - 2.6.1.102,2.6.1.109 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000447 473.0
BYDH3_k127_8672928_1 PFAM Iron-containing alcohol dehydrogenase K00001,K19954 - 1.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002305 380.0
BYDH3_k127_8672928_2 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01950 - 6.3.5.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001009 361.0
BYDH3_k127_8672928_3 Signal transducing histidine kinase, homodimeric K03407 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004537 360.0
BYDH3_k127_8672928_4 STAS domain - - - 0.00000000000003338 76.0
BYDH3_k127_8689771_0 Psort location Cytoplasmic, score - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003733 339.0
BYDH3_k127_8689771_1 Flagellar Assembly Protein A K09749 - - 0.0000000000000000000000000000000000000000000000000008226 201.0
BYDH3_k127_8708740_0 IrrE N-terminal-like domain - - - 0.0000000000000000000000000000000000000005895 162.0
BYDH3_k127_8708740_1 - - - - 0.000000001675 71.0
BYDH3_k127_8708740_2 S-layer homology domain - - - 0.00000008163 65.0
BYDH3_k127_8708740_3 ROK family K00845,K00847 - 2.7.1.2,2.7.1.4 0.00002164 49.0
BYDH3_k127_8708740_4 nuclease activity K18828 - - 0.0003717 49.0
BYDH3_k127_8714806_0 thiolester hydrolase activity - - - 0.00000000000000000000000000000000000000000000002384 183.0
BYDH3_k127_8714806_1 4Fe-4S dicluster domain K03390 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.0000001494 56.0
BYDH3_k127_871817_0 Exporters of the RND superfamily K07003 - - 1.497e-298 936.0
BYDH3_k127_871817_1 Photosynthesis system II assembly factor YCF48 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001189 254.0
BYDH3_k127_8731557_0 TPR repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003004 287.0
BYDH3_k127_8740041_0 Sugar (and other) transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002979 464.0
BYDH3_k127_8740041_1 CobB/CobQ-like glutamine amidotransferase domain K01952 - 6.3.5.3 0.000000000000000000000000000000000000000000000000000104 189.0
BYDH3_k127_8754722_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 1.618e-197 625.0
BYDH3_k127_8754722_1 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 GO:0000166,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.1.1.16 0.0000000000000000000000003578 109.0
BYDH3_k127_8793280_0 PFAM ApbE family K09740 - - 0.0000000000000000000000000000000000000000000000000000000000000000006362 235.0
BYDH3_k127_8793280_1 Beta-lactamase superfamily domain - - - 0.0000000000000000000000000000000000000000000000000000000002599 210.0
BYDH3_k127_8793280_2 Putative regulatory protein - - - 0.0000000000000000000000000000000000000000000000000000000009625 207.0
BYDH3_k127_8797164_0 With LivFGHM is involved in the high affinity leucine transport K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004503 466.0
BYDH3_k127_8797164_1 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008987,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016053,GO:0017144,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0019805,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046496,GO:0046874,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.5.1.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002987 355.0
BYDH3_k127_8839906_0 PFAM Acetyl-CoA hydrolase transferase - - - 1.109e-217 692.0
BYDH3_k127_8839906_1 PFAM CoA-binding domain protein K01905,K22224 - 6.2.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007887 574.0
BYDH3_k127_8854424_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 1.691e-208 652.0
BYDH3_k127_8854424_1 PFAM major facilitator superfamily MFS_1 K08177 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000006455 258.0
BYDH3_k127_8895865_0 DNA segregation ATPase, FtsK SpoIIIE family K03466 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004108 601.0
BYDH3_k127_8895865_1 An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay K12574 - - 0.0000000000000000000000000000000000001885 144.0
BYDH3_k127_8895865_2 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) K03634 - - 0.0006801 49.0
BYDH3_k127_8902395_0 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001335 338.0
BYDH3_k127_8902395_1 - - - - 0.0000000000000000000000000000000003445 146.0
BYDH3_k127_8902395_2 methyltransferase - - - 0.000000000001381 69.0
BYDH3_k127_8930864_0 Protein involved in receptor activity and transport K02014 - - 0.0000000000000000000000000000000000000000000000000000002507 216.0
BYDH3_k127_8930864_1 TonB dependent receptor K02014 - - 0.0000000000000000000000000000000000000007595 161.0
BYDH3_k127_8951603_0 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000000000000000000000000000000000000000000000000000000001299 236.0
BYDH3_k127_8951603_1 AcrB/AcrD/AcrF family - - - 0.0000000000000000000000000000000000000009621 151.0
BYDH3_k127_8951603_2 O-methyltransferase - - - 0.000000000000000000000000001552 120.0
BYDH3_k127_8951603_3 - - - - 0.00000000000491 73.0
BYDH3_k127_8961212_0 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.00000000000000000000000000000000000000000000000000000000000004488 229.0
BYDH3_k127_8961212_1 ABC transporter substrate binding protein K01989 - - 0.000000000001416 74.0
BYDH3_k127_8988318_0 General secretion pathway protein F K02455,K02653 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006545 265.0
BYDH3_k127_8988318_1 general secretion pathway protein G K02456 - - 0.000000000000000000000000000000000000000000000000000002469 194.0
BYDH3_k127_8988318_2 protein transport across the cell outer membrane K02457,K08084 - - 0.0000112 53.0
BYDH3_k127_9000215_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001034 486.0
BYDH3_k127_9000215_1 Peptidase M50 K16922 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005389 272.0
BYDH3_k127_9022971_0 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 9.345e-247 774.0
BYDH3_k127_9022971_1 Vacuole effluxer Atg22 like K06902 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004622 489.0
BYDH3_k127_9022971_2 - - - - 0.00000000000000000000000000000000000000000000000000000003916 203.0
BYDH3_k127_9022971_3 Phosphate acyltransferases - - - 0.0000000000000000000000000000000000001681 158.0
BYDH3_k127_9043087_0 Putative heavy-metal chelation K09138 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004747 363.0
BYDH3_k127_9043087_1 abc-type fe3 -hydroxamate transport system, periplasmic component K02016 - - 0.0000000000000000000000000000000000002705 141.0
BYDH3_k127_9113422_0 ABC transporter K06020 - 3.6.3.25 8.764e-295 911.0
BYDH3_k127_9116955_0 General secretion pathway protein K K02460 - - 0.000000000000000000000000000000000000000001487 169.0
BYDH3_k127_9116955_1 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.0000000000000000000000000113 111.0
BYDH3_k127_9116955_2 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.00000000000000005406 82.0
BYDH3_k127_9116955_3 general secretion pathway protein K02457,K02459,K10927,K12285 - - 0.00006241 52.0
BYDH3_k127_9117789_0 NADH flavin oxidoreductase NADH oxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002084 617.0
BYDH3_k127_9117789_1 KR domain - - - 0.0000000000000000000000000000000000000000000000007751 183.0
BYDH3_k127_9117789_2 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K06001 - 4.2.1.20 0.00000000000000000001882 92.0
BYDH3_k127_9119863_0 Inorganic H+ pyrophosphatase K15987 - 3.6.1.1 1.303e-196 616.0
BYDH3_k127_9119863_1 Inorganic H+ pyrophosphatase K15987 - 3.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002695 448.0
BYDH3_k127_9119863_2 PFAM MotA TolQ ExbB proton channel K02556 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001885 275.0
BYDH3_k127_9124199_0 Electron transfer flavoprotein, alpha subunit K03522,K22432 - 1.3.1.108 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006425 473.0
BYDH3_k127_9124199_1 Phosphate-selective porin O and P - - - 0.0000000000000000000000000000000000000000000000001026 191.0
BYDH3_k127_9135024_0 aconitate hydratase activity K01681 - 4.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001458 592.0
BYDH3_k127_9135109_0 Polyprenyl synthetase K00795,K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.000000000000000000000000000000000000000000000000000000000000000000000000001102 259.0
BYDH3_k127_9135109_1 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.0000000000000000000000000000000000000000000000000000000000000008314 229.0
BYDH3_k127_9135109_2 Peptidase family M23 - - - 0.000000000000000000000000000000000000000000000000001541 193.0
BYDH3_k127_9135109_3 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.0000000000000009668 79.0
BYDH3_k127_9137766_0 Protein involved in receptor activity and transport K02014 - - 0.000000000000000000000000000000000000000000000000000000000000002063 240.0
BYDH3_k127_918407_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009566 515.0
BYDH3_k127_918407_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006356 359.0
BYDH3_k127_918407_2 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005846 311.0
BYDH3_k127_918407_3 helix_turn_helix, Arsenical Resistance Operon Repressor K03892 - - 0.0000000000000000000002454 100.0
BYDH3_k127_9227762_0 PFAM CO dehydrogenase acetyl-CoA synthase delta subunit K00194 - 2.1.1.245 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008164 323.0
BYDH3_k127_9227762_1 TIGRFAM Carbon-monoxide dehydrogenase, catalytic subunit K00198 - 1.2.7.4 0.00000000000000000000000000000000000000000000000000002688 196.0
BYDH3_k127_9267077_0 AIR synthase related protein, C-terminal domain K04655 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003106 444.0
BYDH3_k127_9267077_1 PFAM DNA topoisomerase type IA zn finger domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000822 347.0
BYDH3_k127_9267077_2 carbon monoxide binding K04654 - - 0.000000001147 59.0
BYDH3_k127_9281282_0 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen K00990 - 2.7.7.59 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003508 287.0
BYDH3_k127_9281282_1 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen K00990 - 2.7.7.59 0.0000000000000000000000000000271 124.0
BYDH3_k127_9301449_0 Aldo Keto reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001869 299.0
BYDH3_k127_9301449_1 cyclic nucleotide-binding domain - - - 0.0000000000000000000000000000003147 134.0
BYDH3_k127_9301449_2 SnoaL-like domain - - - 0.000000004872 65.0
BYDH3_k127_9338447_0 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008611 518.0
BYDH3_k127_9338447_1 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000007388 259.0
BYDH3_k127_9346452_0 Orotidine 5'-phosphate decarboxylase / HUMPS family K01591 - 4.1.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001402 366.0
BYDH3_k127_9346452_1 ECF sigma factor K03088 - - 0.0000000000000000000000000000000000000000000000000002179 192.0
BYDH3_k127_9346452_2 acyl-CoA thioester hydrolase, YbgC YbaW family K07107 - - 0.000000000000000000000000000008465 123.0
BYDH3_k127_9346452_3 Putative zinc-finger - - - 0.0000000000001643 76.0
BYDH3_k127_9366916_0 Flavodoxin domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006997 288.0
BYDH3_k127_9366916_1 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.000000000000000000000002296 113.0
BYDH3_k127_9366916_2 - - - - 0.000002231 52.0
BYDH3_k127_9375739_0 Belongs to the thiolase family K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000212 469.0
BYDH3_k127_9375739_1 PFAM Filamentation induced by cAMP - - - 0.000000000000000000000001707 106.0
BYDH3_k127_9383906_0 Sigma-54 factor interaction domain-containing protein K07712 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002138 544.0
BYDH3_k127_9383906_1 Putative diguanylate phosphodiesterase - - - 0.000000000000000000000000000000000000000001905 162.0
BYDH3_k127_9396459_0 Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL-diaminopimelate K10206 - 2.6.1.83 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002302 525.0
BYDH3_k127_9396459_1 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008839,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016627,GO:0016628,GO:0019752,GO:0019877,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576 1.17.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003754 332.0
BYDH3_k127_9396459_2 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 - 2.7.6.3 0.00001736 49.0
BYDH3_k127_9411479_0 NADH:flavin oxidoreductase / NADH oxidase family - - - 0.0000000000000000000000000000000000000000000000000000000000000003162 244.0
BYDH3_k127_9443366_0 glycogen (starch) synthase activity K00693,K00696,K00754,K20430,K20444 - 2.4.1.11,2.4.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002581 298.0
BYDH3_k127_9468373_0 PFAM peptidase U32 K08303 - - 3.568e-276 860.0
BYDH3_k127_9468373_1 BadF BadG BcrA BcrD - - - 0.0000000000000000000000000000000000000000001454 160.0
BYDH3_k127_9468373_2 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000008415 156.0
BYDH3_k127_9468373_3 4 iron, 4 sulfur cluster binding - - - 0.00000000000000000000000000000002902 127.0
BYDH3_k127_9491685_0 PFAM FAD linked oxidase domain protein K00104 - 1.1.3.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000886 493.0
BYDH3_k127_9491685_1 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.0000000000000000000000000000000000000000004687 160.0
BYDH3_k127_9563414_0 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001432 406.0
BYDH3_k127_9563414_1 Plays a role in the regulation of phosphate uptake K02039 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000009699 251.0
BYDH3_k127_9575526_0 Phosphatidylethanolamine-binding protein K06910 - - 0.000000000000000000000000000000000000000000000000000000000000000305 222.0
BYDH3_k127_9575526_1 - - - - 0.00000000000000000000000000557 119.0
BYDH3_k127_9584773_0 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K02945,K03527 - 1.17.7.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001063 460.0
BYDH3_k127_9593699_0 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001754 470.0
BYDH3_k127_9593699_1 Polyprenyl synthetase K02523,K13787 GO:0003674,GO:0003824,GO:0004659,GO:0016740,GO:0016765 2.5.1.1,2.5.1.10,2.5.1.29,2.5.1.90 0.000000000000000000000000000000000000000000000000000000000000000000003986 246.0
BYDH3_k127_9603884_0 Bacterial regulatory protein, Fis family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008759 518.0
BYDH3_k127_9603884_1 PFAM Extracellular solute-binding protein, family 3 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006256 278.0
BYDH3_k127_9641229_0 Plays a role in the flagellum-specific transport system K02419 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003171 292.0
BYDH3_k127_9641229_1 flagellar motor switch protein FliM K02416 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001242 294.0
BYDH3_k127_9641229_2 Flagellar motor switch protein FliN K02417 - - 0.0000000000000000000000000000002958 126.0
BYDH3_k127_9641229_3 Controls the rotational direction of flagella during chemotaxis K02415 - - 0.00000000000000000000000000882 117.0
BYDH3_k127_9641229_4 Role in flagellar biosynthesis K02420,K03227 - - 0.0000000006125 60.0
BYDH3_k127_9641229_5 flagellar K02418 - - 0.00004824 51.0
BYDH3_k127_9665322_0 amino acid K03294 - - 3.408e-224 704.0
BYDH3_k127_9665322_1 Mediates zinc uptake. May also transport other divalent cations K07238 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001801 474.0
BYDH3_k127_9665322_2 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine - - - 0.0000000000000000000000000000000000000000000000001183 182.0
BYDH3_k127_9675720_0 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006408 613.0
BYDH3_k127_9675720_1 TIGRFAM Lipoprotein releasing system, transmembrane protein, LolC E family K09808 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000592 365.0
BYDH3_k127_9675720_2 LemA family K03744 - - 0.00000000000000000000000000000000000000000000000000000000000000000009155 235.0
BYDH3_k127_9675720_3 nucleotidyltransferase activity - - - 0.000000000000000000000000000000000000000000000000000002652 199.0
BYDH3_k127_9675720_4 - - - - 0.0000000000000000000000000000000000000000001108 162.0
BYDH3_k127_9675720_5 Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner K09810 - - 0.000000000000000000000000000000000000000559 152.0
BYDH3_k127_9675720_6 Smr domain - - - 0.000000000000000000000000003249 113.0
BYDH3_k127_9688391_0 Major Facilitator Superfamily K08223 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005204 548.0
BYDH3_k127_9688391_1 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 0.00000000000000000000000000000000000000000000000000000000000000002709 224.0
BYDH3_k127_970793_0 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006616 465.0
BYDH3_k127_970793_1 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008614,GO:0008615,GO:0009058,GO:0009110,GO:0009987,GO:0016740,GO:0016769,GO:0017144,GO:0018130,GO:0019438,GO:0033856,GO:0034641,GO:0042364,GO:0042816,GO:0042819,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072524,GO:0072525,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 2.6.99.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001537 295.0
BYDH3_k127_970793_2 Threonylcarbamoyl adenosine biosynthesis protein TsaE K06925 - - 0.00000000000000000000000000000000000003714 148.0
BYDH3_k127_970793_3 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.00000000000000000000000000000002434 130.0
BYDH3_k127_970793_4 metal-dependent phosphohydrolase 7TM intracellular region K07037 - - 0.00000000000000000000000000001202 121.0
BYDH3_k127_970793_5 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.0000000000000000000000000691 112.0
BYDH3_k127_9736598_0 Transposase K07491 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000236 408.0
BYDH3_k127_9736598_1 NADH oxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000004884 246.0
BYDH3_k127_9777689_0 COG2801 Transposase and inactivated derivatives K07497 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005355 291.0
BYDH3_k127_9777689_1 Aldo/keto reductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000009349 272.0
BYDH3_k127_9811049_0 electron transfer flavoprotein-ubiquinone oxidoreductase K00311 - 1.5.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004294 588.0
BYDH3_k127_9811049_1 4Fe-4S dicluster domain K16887 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001488 539.0
BYDH3_k127_9815485_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001432 439.0
BYDH3_k127_9815485_1 MgsA AAA+ ATPase C terminal K07478 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001275 294.0
BYDH3_k127_9815485_2 sensor, signal transduction histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000002662 235.0
BYDH3_k127_9843278_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 GO:0000166,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.1.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001946 445.0
BYDH3_k127_9843278_1 peptidyl-lysine modification to peptidyl-hypusine - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000219 260.0
BYDH3_k127_9843278_2 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770,K12506 - 2.7.7.60,4.6.1.12 0.00000000000000000000000000000000000000000000000000000000000347 211.0
BYDH3_k127_9843278_3 peptidyl-lysine modification to peptidyl-hypusine - - - 0.0000000000000000000000000000000006093 134.0
BYDH3_k127_9843278_4 TIGRFAM regulatory protein, FmdB - - - 0.0000000000000005078 79.0
BYDH3_k127_9843278_5 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate K03271 - 5.3.1.28 0.000000002312 59.0
BYDH3_k127_9852204_0 Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003769 479.0
BYDH3_k127_9887035_0 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002987 459.0
BYDH3_k127_9887035_1 Protein of unknown function (DUF502) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001017 268.0
BYDH3_k127_9887035_2 OprF membrane domain K03286 - - 0.000000000000000000000000000000000000001453 156.0
BYDH3_k127_9887035_3 four-way junction helicase activity K03550 GO:0000217,GO:0000400,GO:0000724,GO:0000725,GO:0003674,GO:0003676,GO:0003677,GO:0003678,GO:0003824,GO:0004386,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007154,GO:0008150,GO:0008152,GO:0009314,GO:0009378,GO:0009379,GO:0009432,GO:0009605,GO:0009628,GO:0009987,GO:0009991,GO:0016020,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0022607,GO:0031668,GO:0032392,GO:0032508,GO:0032991,GO:0033202,GO:0033554,GO:0034641,GO:0042802,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0048476,GO:0050896,GO:0051259,GO:0051260,GO:0051262,GO:0051276,GO:0051289,GO:0051716,GO:0065003,GO:0071103,GO:0071496,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0097159,GO:0140097,GO:1901360,GO:1901363,GO:1902494 3.6.4.12 0.0004742 44.0
BYDH3_k127_990601_0 Adenylyl cyclase class-3 4 guanylyl cyclase K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000825 367.0
BYDH3_k127_990601_1 PFAM Phosphomethylpyrimidine kinase type-1 K00941,K14153 - 2.5.1.3,2.7.1.49,2.7.4.7 0.0000000000000000000000000000000000000000000000000000000000000000006304 236.0
BYDH3_k127_990601_2 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 - 4.1.99.17 0.0000000000000000000000000000000000000000000000000000000000003859 217.0
BYDH3_k127_9930349_0 NADH flavin oxidoreductase NADH oxidase - - - 3.077e-265 833.0
BYDH3_k127_9930349_1 PFAM fumarate reductase succinate dehydrogenase flavoprotein domain protein K00244 - 1.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003865 304.0
BYDH3_k127_9930349_2 transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000003064 210.0
BYDH3_k127_9930349_3 FAD dependent oxidoreductase K00244 - 1.3.5.4 0.000000000000004399 76.0
BYDH3_k127_9930380_0 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006378 306.0
BYDH3_k127_9930380_1 Cytochrome C assembly protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005864 260.0
BYDH3_k127_9930380_2 Elongator protein 3, MiaB family, Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003726 246.0
BYDH3_k127_9930380_3 TIGRFAM siroheme synthase K02304 - 1.3.1.76,4.99.1.4 0.000000000000000000000000000000000000000000000002079 181.0
BYDH3_k127_9934904_0 Bacterial regulatory protein, Fis family K10943 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005541 378.0
BYDH3_k127_9934904_1 Tetratricopeptide repeat - - - 0.00001736 53.0
BYDH3_k127_9935676_0 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766,K13497 GO:0000162,GO:0003674,GO:0003824,GO:0004048,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.18,4.1.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003378 381.0
BYDH3_k127_9935676_1 with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine K01658,K01664 - 2.6.1.85,4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000004655 267.0
BYDH3_k127_9935676_2 Belongs to the TrpC family K01609 - 4.1.1.48 0.0000000000000000000000000000000000000000000000000000000000001045 221.0
BYDH3_k127_9935676_3 Belongs to the TrpF family K01817 - 5.3.1.24 0.00000000000000000000000000000000000000000000000000002349 192.0
BYDH3_k127_9935676_4 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 - 4.2.1.20 0.0000000000000000000000000000001566 126.0
BYDH3_k127_9935676_5 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 0.000000000000000000001481 94.0
BYDH3_k127_9935676_6 Belongs to the TrpF family K01817 - 5.3.1.24 0.000001602 51.0
BYDH3_k127_9970273_0 Protein of unknown function (DUF1329) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001331 514.0
BYDH3_k127_9970273_1 Protein of unknown function (DUF1302) - - - 0.0000000000000000000000000000000000000000000000000001551 196.0
BYDH3_k127_9972846_0 zinc-ribbon domain - - - 0.00000000000000000000000000000007401 133.0
BYDH3_k127_9972846_1 Type II/IV secretion system protein K02669 - - 0.0000000000000000000002328 98.0
BYDH3_k127_9988143_0 ubiE/COQ5 methyltransferase family - - - 0.0000000000000000000000000000000000000000001973 168.0
BYDH3_k127_9988143_1 nucleotide metabolic process - - - 0.0000000000000000000000000000000000000007963 156.0
BYDH3_k127_9988143_2 PFAM Pyridoxal-dependent decarboxylase K01580 - 4.1.1.15 0.00000000002801 65.0