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Overview

ID MAG00198
Name BYDH3_bin.7
Sample SMP0006
Taxonomy
Kingdom Bacteria
Phylum Bacteroidota
Class Bacteroidia
Order Cytophagales
Family Cyclobacteriaceae
Genus ELB16-189
Species
Assembly information
Completeness (%) 79.02
Contamination (%) 2.88
GC content (%) 42.0
N50 (bp) 6,356
Genome size (bp) 2,843,921

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes2796

Gene name Description KEGG GOs EC E-value Score Sequence
BYDH3_k127_10009671_0 SnoaL-like domain - - - 4.778e-315 1030.0
BYDH3_k127_10009671_1 Serine carboxypeptidase - - - 1.188e-218 688.0
BYDH3_k127_10009671_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001681 531.0
BYDH3_k127_10009671_3 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007183 406.0
BYDH3_k127_10009671_4 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000003433 229.0
BYDH3_k127_10009671_5 Histidine kinase - - - 0.0000000006061 59.0
BYDH3_k127_10013308_0 Oxidoreductase family, NAD-binding Rossmann fold K00118 - 1.1.99.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001814 478.0
BYDH3_k127_10013308_1 prohibitin homologues K04088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007055 436.0
BYDH3_k127_10013308_2 Domain of Unknown Function (DUF1080) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001899 413.0
BYDH3_k127_10013308_3 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03768 - 5.2.1.8 0.00000000000000000000000000000000000000000001188 168.0
BYDH3_k127_10013308_4 CBS domain - - - 0.0000000000000000000000000002584 116.0
BYDH3_k127_10078614_0 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain - - - 7.787e-195 625.0
BYDH3_k127_10078614_1 Alpha beta hydrolase K07019 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007042 395.0
BYDH3_k127_10078614_2 PFAM Integral membrane protein TerC - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001191 274.0
BYDH3_k127_10078614_3 Belongs to the SOS response-associated peptidase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001194 252.0
BYDH3_k127_10078614_4 DinB superfamily - - - 0.00000000000000000000000000000000000000000000000000000000003944 209.0
BYDH3_k127_10078614_5 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.000000001273 68.0
BYDH3_k127_10084370_0 Glycine D-amino acid oxidases (deaminating) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000851 248.0
BYDH3_k127_10084370_1 FAD dependent oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000003085 224.0
BYDH3_k127_10084370_2 - - - - 0.00000000000000000000000000000000000001027 151.0
BYDH3_k127_10115010_0 MacB-like periplasmic core domain K02004 - - 7.302e-229 736.0
BYDH3_k127_10115010_1 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 - 6.3.4.5 6.496e-197 619.0
BYDH3_k127_10115010_2 Acetyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003593 332.0
BYDH3_k127_10115010_3 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.0000000000000000000000000000000000000005115 151.0
BYDH3_k127_10115010_4 GMC oxidoreductase - - - 0.000000000000000000000000000004882 119.0
BYDH3_k127_10115010_5 SNARE associated Golgi protein - - - 0.000000000000000000000000000005248 126.0
BYDH3_k127_10139572_0 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 5.217e-223 699.0
BYDH3_k127_10139572_1 Belongs to the BshC family K22136 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002784 546.0
BYDH3_k127_10139572_2 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) K03110 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003264 524.0
BYDH3_k127_10139572_3 HAD-hyrolase-like - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005634 252.0
BYDH3_k127_10139572_4 5-formyltetrahydrofolate cyclo-ligase family K01934 - 6.3.3.2 0.00000000000000000000000000000000000000000000003928 177.0
BYDH3_k127_10139572_5 - - - - 0.00000000000000000000000000000000000000388 154.0
BYDH3_k127_10139572_6 Belongs to the bacterial ribosomal protein bL28 family K02902 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000003661 132.0
BYDH3_k127_10139572_7 Belongs to the bacterial ribosomal protein bL33 family K02913 - - 0.000000000000000000000000001677 111.0
BYDH3_k127_10139572_8 Domain of unknown function (DUF4295) - - - 0.00000000000002281 73.0
BYDH3_k127_10139572_9 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella - - - 0.0000000000001232 74.0
BYDH3_k127_10144798_0 FtsX-like permease family K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005473 508.0
BYDH3_k127_10144798_1 ATPases associated with a variety of cellular activities K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001964 334.0
BYDH3_k127_10144798_2 HlyD family secretion protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004965 274.0
BYDH3_k127_10144798_3 Phospholipid methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000008518 220.0
BYDH3_k127_10144798_4 Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000001445 199.0
BYDH3_k127_10144816_0 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003302 462.0
BYDH3_k127_10144816_1 Sulfite exporter TauE/SafE K07090 - - 0.0000000000000000000000000000000000000000000000000000000000000001246 229.0
BYDH3_k127_10144816_2 Molybdenum cofactor biosynthesis protein K03637 - 4.6.1.17 0.000000000000000000000000000000000000000000000000000000000003169 211.0
BYDH3_k127_10144816_3 Molybdopterin converting factor, large subunit K03635 - 2.8.1.12 0.00000000000000000000000000000000000000000000001338 175.0
BYDH3_k127_10144816_4 Molybdenum cofactor synthesis domain protein K03750 - 2.10.1.1 0.00000000000000000000000000000000003391 137.0
BYDH3_k127_10144816_5 Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin K03636 - - 0.0000000000000000007532 89.0
BYDH3_k127_10154263_0 Transposase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009551 441.0
BYDH3_k127_10154263_1 Asparaginase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002756 407.0
BYDH3_k127_10154706_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 6.873e-298 929.0
BYDH3_k127_10154706_1 Dienelactone hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001993 379.0
BYDH3_k127_10158907_0 PFAM ABC transporter - - - 1.619e-214 685.0
BYDH3_k127_10158907_1 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000356 262.0
BYDH3_k127_10233235_0 Belongs to the pirin family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004401 309.0
BYDH3_k127_10233235_1 - - - - 0.00000000000000000000000000000000000000000000008973 176.0
BYDH3_k127_10233235_2 Membrane dipeptidase (Peptidase family M19) K01273,K01274 - 3.4.13.19 0.0000000000000000000000000000000000000000000004253 172.0
BYDH3_k127_10233235_3 Isochorismatase family - - - 0.00000007259 53.0
BYDH3_k127_10249267_0 PFAM D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain K00058 - 1.1.1.399,1.1.1.95 2.013e-304 944.0
BYDH3_k127_10249267_1 Hypothetical methyltransferase K07755 - 2.1.1.137 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006343 379.0
BYDH3_k127_10249267_2 imidazolonepropionase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002722 373.0
BYDH3_k127_10249267_3 alcohol dehydrogenase K13979 - - 0.000000000000000000000000000000000000000000000000000001959 194.0
BYDH3_k127_10249267_4 PFAM Bacterial regulatory protein, arsR family - - - 0.00000000000000000000000000000000000004186 145.0
BYDH3_k127_10249267_5 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine K00831 - 2.6.1.52 0.000000000000000000000003896 104.0
BYDH3_k127_10249267_6 Acetyltransferase (GNAT) domain K00619 - 2.3.1.1 0.00000000000000000002054 96.0
BYDH3_k127_10249267_7 alcohol dehydrogenase K13979 - - 0.0000000000000315 72.0
BYDH3_k127_10255496_0 TIGRFAM acetyl-CoA carboxylase, biotin carboxylase K01961 - 6.3.4.14,6.4.1.2 9.173e-255 789.0
BYDH3_k127_10255496_1 ABC transporter substrate-binding component GldG K01992 - - 1.278e-195 624.0
BYDH3_k127_10255496_10 Sodium/calcium exchanger protein K07301 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003942 272.0
BYDH3_k127_10255496_12 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.00000000000000000000000000000000000000000000000001082 185.0
BYDH3_k127_10255496_13 - - - - 0.000000000000000000000000000000000000000000000002191 186.0
BYDH3_k127_10255496_2 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004945 604.0
BYDH3_k127_10255496_3 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003125 515.0
BYDH3_k127_10255496_4 Belongs to the FPP GGPP synthase family K02523 - 2.5.1.90 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001261 465.0
BYDH3_k127_10255496_5 PFAM CBS domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001111 449.0
BYDH3_k127_10255496_6 TIGRFAM Gliding motility-associated ABC transporter ATP-binding subunit GldA K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001185 382.0
BYDH3_k127_10255496_7 Mediates influx of magnesium ions K03284 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005725 360.0
BYDH3_k127_10255496_8 TIGRFAM Gliding motility-associated ABC transporter permease protein GldF K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009763 334.0
BYDH3_k127_10255496_9 Mechanosensitive ion channel - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001511 307.0
BYDH3_k127_10294106_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 GO:0003674,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.7 0.0 1196.0
BYDH3_k127_10294106_1 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 7.486e-210 661.0
BYDH3_k127_10294106_2 TIGRFAM DNA protecting protein DprA K04096 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005796 430.0
BYDH3_k127_10294106_3 Bacterial capsule synthesis protein PGA_cap K07282 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007597 426.0
BYDH3_k127_10294106_4 PFAM Peptidase family M23 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005998 289.0
BYDH3_k127_10294106_5 peptidase M23 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000666 245.0
BYDH3_k127_10294106_6 helix_turn_helix, mercury resistance - - - 0.0000000000000000000000000000000000000000000000005845 177.0
BYDH3_k127_10364174_0 Peptidase family M48 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001139 372.0
BYDH3_k127_10364174_1 PFAM fumarylacetoacetate (FAA) hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001181 359.0
BYDH3_k127_10364174_2 Protein of unknown function (DUF2452) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002417 307.0
BYDH3_k127_10364174_3 PFAM Peptidase family M23 - - - 0.000000000000000000000000000000000000000000000000000009819 195.0
BYDH3_k127_10364174_4 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.000000000000000000000000003987 111.0
BYDH3_k127_10381730_0 Belongs to the DEAD box helicase family K05592 - 3.6.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006077 374.0
BYDH3_k127_10381730_1 Phenylacetic acid catabolic protein K02611 - 1.14.13.149 0.000000000000000000000000000000000000000000000000000000000000000001245 228.0
BYDH3_k127_10381730_2 Phenylacetate-CoA oxygenase K02612 - - 0.00000000000000000000000000000000000000000000000000000000000977 210.0
BYDH3_k127_10381730_3 Phenylacetic acid catabolic protein K02611 - 1.14.13.149 0.0000000000000000000000000000000000000000000003099 169.0
BYDH3_k127_10381730_4 phenylacetate catabolic process K02610 - - 0.000000000000000000000001946 104.0
BYDH3_k127_10459460_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001633 256.0
BYDH3_k127_10459460_1 - - - - 0.00000000000000000000000000000001203 131.0
BYDH3_k127_10469550_0 Outer membrane efflux protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005161 536.0
BYDH3_k127_10469550_1 Cupin 2, conserved barrel domain protein - - - 0.0000000000000000000000001207 109.0
BYDH3_k127_10469550_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.000003781 49.0
BYDH3_k127_10533524_0 Carboxypeptidase regulatory-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001318 356.0
BYDH3_k127_10533524_1 - - - - 0.000000000000000006112 93.0
BYDH3_k127_10533524_2 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase K03772,K03773 - 5.2.1.8 0.0000000003932 62.0
BYDH3_k127_10537826_0 lysine biosynthetic process via aminoadipic acid - - - 1.363e-233 745.0
BYDH3_k127_10537826_1 PFAM 2Fe-2S iron-sulfur cluster binding domain K02613 - - 0.0000007625 51.0
BYDH3_k127_10563072_0 PFAM Peptidase family M20 M25 M40 K01436 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006936 465.0
BYDH3_k127_10563072_1 - - - - 0.00000000000000000000000000000000000000000000552 176.0
BYDH3_k127_10563072_2 Rieske [2Fe-2S] domain K05710 - - 0.00000000000000000000007344 101.0
BYDH3_k127_10563072_3 Peptidase dimerisation domain K01436 - - 0.0000002827 53.0
BYDH3_k127_10567334_0 Participates in both transcription termination and antitermination K02600 - - 1.1e-225 703.0
BYDH3_k127_10567334_1 PFAM NAD dependent epimerase dehydratase family K01710 - 4.2.1.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004559 596.0
BYDH3_k127_10567334_2 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001611 350.0
BYDH3_k127_10567334_3 Required for maturation of 30S ribosomal subunits K09748 GO:0000028,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.0000000000000000000000000000000000005426 146.0
BYDH3_k127_10570371_0 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004527 611.0
BYDH3_k127_10570371_1 PFAM Aminotransferase class I and II K00812 - 2.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002066 586.0
BYDH3_k127_10570371_2 metallopeptidase activity K01181 - 3.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001478 485.0
BYDH3_k127_10570371_3 pfkB family carbohydrate kinase K03272 - 2.7.1.167,2.7.7.70 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009018 404.0
BYDH3_k127_10570371_4 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001306 293.0
BYDH3_k127_10570371_5 CarboxypepD_reg-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002117 280.0
BYDH3_k127_10570371_6 PFAM 6-O-methylguanine DNA methyltransferase, DNA binding domain K00567,K07443 - 2.1.1.63 0.00000000000000000000000000000000000000009195 154.0
BYDH3_k127_10570371_7 Belongs to the ClpS family K06891 - - 0.000000000000000000000000000000000000005782 147.0
BYDH3_k127_10571939_0 MacB-like periplasmic core domain K02004 - - 2.655e-202 645.0
BYDH3_k127_10571939_1 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.00000000000000000000000000000000000000000000000000000007559 200.0
BYDH3_k127_10578434_0 Acyltransferase family K11941 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002035 513.0
BYDH3_k127_10578434_1 Protein of unknown function (DUF1349) K09702 - - 0.000000000000000000000000000001061 126.0
BYDH3_k127_10578434_2 Beta-lactamase K01286 - 3.4.16.4 0.00000000000000000006084 100.0
BYDH3_k127_10590089_0 PFAM NAD dependent epimerase dehydratase family K07071 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001039 316.0
BYDH3_k127_10590089_1 beta-1,4-mannooligosaccharide phosphorylase K21065 - 3.2.1.197 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001481 271.0
BYDH3_k127_10648608_0 Prolyl oligopeptidase family - - - 2.268e-270 855.0
BYDH3_k127_10648608_1 Belongs to the ompA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002626 577.0
BYDH3_k127_10648608_10 Domain of unknown function (DUF4252) - - - 0.000000000000000000000000000000000000000000000000000003819 195.0
BYDH3_k127_10648608_11 Belongs to the P-Pant transferase superfamily - - - 0.000000000000000000000000000000000000000000004171 171.0
BYDH3_k127_10648608_12 Belongs to the HesB IscA family K13628 - - 0.0000000000000000000000000000000005525 133.0
BYDH3_k127_10648608_13 Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin K01633 - 1.13.11.81,4.1.2.25,5.1.99.8 0.000000000000000000000000000000003545 131.0
BYDH3_k127_10648608_14 - - - - 0.000000000000000000000000001299 117.0
BYDH3_k127_10648608_16 AhpC/TSA family - - - 0.000000000000000001529 89.0
BYDH3_k127_10648608_17 Putative prokaryotic signal transducing protein - - - 0.000000000000001225 82.0
BYDH3_k127_10648608_18 - - - - 0.00002238 53.0
BYDH3_k127_10648608_19 Domain of unknown function (DUF4252) - - - 0.0001781 50.0
BYDH3_k127_10648608_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001251 352.0
BYDH3_k127_10648608_3 PFAM WD domain, G-beta repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001278 345.0
BYDH3_k127_10648608_4 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001015 281.0
BYDH3_k127_10648608_5 epimerase - - - 0.000000000000000000000000000000000000000000000000000000000000000000004241 240.0
BYDH3_k127_10648608_6 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 GO:0002161,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006399,GO:0006450,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0034641,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0051499,GO:0051500,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:1901360 - 0.00000000000000000000000000000000000000000000000000000000000000003196 225.0
BYDH3_k127_10648608_7 TIGRFAM DivIVA domain K04074 - - 0.0000000000000000000000000000000000000000000000000000000000001624 219.0
BYDH3_k127_10648608_8 Sigma-70, region 4 K03088 - - 0.0000000000000000000000000000000000000000000000000000000000004674 216.0
BYDH3_k127_10648608_9 - - - - 0.00000000000000000000000000000000000000000000000000000003068 201.0
BYDH3_k127_10674784_0 Nicotinate-nucleotide adenylyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007703 557.0
BYDH3_k127_10674784_1 PFAM Sodium alanine symporter family K03310 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001292 553.0
BYDH3_k127_10674784_2 Belongs to the arginase family K01480 - 3.5.3.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002665 419.0
BYDH3_k127_10674784_3 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000001438 243.0
BYDH3_k127_10674784_4 PFAM Phosphoglycerate mutase K08296 - - 0.00000000000000000001009 98.0
BYDH3_k127_10698181_0 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 0.0 1096.0
BYDH3_k127_10698181_1 PFAM Prolyl oligopeptidase, N-terminal beta-propeller domain K01322 GO:0005575,GO:0005623,GO:0042597,GO:0044464 3.4.21.26 2.194e-310 966.0
BYDH3_k127_10698181_10 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.00000000000000000000000000000000000000000000000000000000000000000000000000001879 261.0
BYDH3_k127_10698181_11 - - - - 0.0000000000000000000000000000000000000000000000000000007894 201.0
BYDH3_k127_10698181_12 - - - - 0.00000000000000000000006665 100.0
BYDH3_k127_10698181_2 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 8.803e-250 779.0
BYDH3_k127_10698181_3 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 GO:0005575,GO:0005622,GO:0005623,GO:0006950,GO:0006974,GO:0008150,GO:0009380,GO:0009987,GO:0032991,GO:0033554,GO:0044424,GO:0044464,GO:0050896,GO:0051716,GO:1902494,GO:1905347,GO:1905348,GO:1990391 - 1.022e-230 728.0
BYDH3_k127_10698181_4 TIGRFAM dihydroorotase, multifunctional complex type K01465 - 3.5.2.3 8.363e-211 662.0
BYDH3_k127_10698181_5 Oxidoreductase family, C-terminal alpha beta domain - - - 2.247e-210 661.0
BYDH3_k127_10698181_6 tRNA synthetase class II core domain (G, H, P, S and T) K01875 - 6.1.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003109 593.0
BYDH3_k127_10698181_7 Belongs to the DEAD box helicase family K11927 - 3.6.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003487 520.0
BYDH3_k127_10698181_8 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003839 352.0
BYDH3_k127_10698181_9 TPM domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004767 317.0
BYDH3_k127_10725379_0 Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly K11942 - 5.4.99.13 0.0 1083.0
BYDH3_k127_10725379_1 Belongs to the MlaE permease family K02066 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000526 352.0
BYDH3_k127_10725379_2 Organic solvent ABC transporter ATP-binding protein K02065 - - 0.00000000000002104 74.0
BYDH3_k127_10740896_0 FtsX-like permease family K02004 - - 3.133e-320 1001.0
BYDH3_k127_10740896_1 C-terminal domain of CHU protein family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009018 469.0
BYDH3_k127_10740896_2 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004527 325.0
BYDH3_k127_10740896_3 GDSL-like Lipase/Acylhydrolase family K10804 - 3.1.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000001456 261.0
BYDH3_k127_10740896_4 PFAM GDSL-like Lipase Acylhydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000004632 233.0
BYDH3_k127_10766840_0 Acyl-CoA dehydrogenase, middle domain K00232 - 1.3.3.6 4.152e-294 916.0
BYDH3_k127_10766840_1 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000000000000001391 101.0
BYDH3_k127_10813769_0 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003046 570.0
BYDH3_k127_10813769_1 Belongs to the glycosyl hydrolase 3 family K05349 - 3.2.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004917 557.0
BYDH3_k127_10813769_2 Belongs to the glycosyl hydrolase 3 family K05349 - 3.2.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001144 531.0
BYDH3_k127_10813769_3 transcriptional regulatory protein - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000517 290.0
BYDH3_k127_10813769_4 Sulfite exporter TauE/SafE K07090 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002911 274.0
BYDH3_k127_10813769_5 PFAM Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.000000000000000000000000000000000000000000000000002717 188.0
BYDH3_k127_10813769_6 - - - - 0.0000000000000000000000000000000000000000000000000116 200.0
BYDH3_k127_10813769_7 (GNAT) family K03829 - - 0.000000000000000000000000000000000004098 141.0
BYDH3_k127_10847352_0 PFAM Amidohydrolase 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001277 519.0
BYDH3_k127_10847352_1 TPR repeat-containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007876 438.0
BYDH3_k127_10847352_2 Protein of unknown function (DUF3500) - - - 0.000000000000000000000002822 106.0
BYDH3_k127_10847352_3 Diacylglycerol kinase - - - 0.0004424 45.0
BYDH3_k127_10858966_0 PFAM TonB-dependent Receptor Plug Domain K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001153 397.0
BYDH3_k127_10858966_1 PFAM TonB-dependent Receptor Plug Domain K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001044 353.0
BYDH3_k127_10858966_2 PFAM UbiA prenyltransferase K03179 - 2.5.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004632 302.0
BYDH3_k127_10858966_3 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.00000000000000000000000000000000000000000000000000000000000001086 221.0
BYDH3_k127_10858966_4 Thioesterase-like superfamily K07107 - - 0.00000000000000000000000000000000000000001049 157.0
BYDH3_k127_10862913_0 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003359 387.0
BYDH3_k127_10862913_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005586 313.0
BYDH3_k127_10862913_2 PFAM ABC transporter K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005961 264.0
BYDH3_k127_10870389_0 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K03737 - 1.2.7.1 5.762e-271 839.0
BYDH3_k127_10870389_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0008137,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0016651,GO:0016655,GO:0030964,GO:0032991,GO:0044425,GO:0050136,GO:0055114,GO:0098796,GO:1902494 1.6.5.3 0.000000000000000000000000000000001645 132.0
BYDH3_k127_10870389_2 - - - - 0.0000000000000000000000000000001067 128.0
BYDH3_k127_10881354_0 membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001257 386.0
BYDH3_k127_10881354_1 Tetratricopeptide repeat protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002881 359.0
BYDH3_k127_10881354_2 peptidylprolyl isomerase K01802,K03770 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000001183 256.0
BYDH3_k127_10881354_3 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.00000000000000000000000000000000000000000000000000000000000000008018 231.0
BYDH3_k127_10881354_4 Lipopolysaccharide-assembly, LptC-related - - - 0.000000000000000000000000000000000000000000000001533 179.0
BYDH3_k127_10881354_5 Glu Leu Phe Val dehydrogenase K00261 - 1.4.1.3 0.0000000000856 62.0
BYDH3_k127_10895950_0 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003365 406.0
BYDH3_k127_10895950_1 Belongs to the universal ribosomal protein uS2 family K02967 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002377 394.0
BYDH3_k127_10895950_2 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K07636 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006804 363.0
BYDH3_k127_10895950_3 TIGRFAM pseudouridine synthase, RluA family K06179,K06180 - 5.4.99.23,5.4.99.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004418 316.0
BYDH3_k127_10895950_4 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000008292 266.0
BYDH3_k127_10895950_5 Response regulator of the LytR AlgR family K02477 - - 0.00000000000000000000000000000000000000000000000000000000000000003078 230.0
BYDH3_k127_10895950_6 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.0000000000000000000000000000000000000000000000000000000000001844 214.0
BYDH3_k127_10895950_7 Belongs to the universal ribosomal protein uS9 family K02996 GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000002499 172.0
BYDH3_k127_10895950_8 MotA/TolQ/ExbB proton channel family - - - 0.000000004342 63.0
BYDH3_k127_10903019_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 3.904e-298 925.0
BYDH3_k127_10903019_1 Oxygen tolerance - - - 5.214e-201 638.0
BYDH3_k127_10903019_2 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002986 586.0
BYDH3_k127_10903019_3 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K18979 - 1.17.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006865 456.0
BYDH3_k127_10903019_4 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000144 353.0
BYDH3_k127_10903019_5 ZIP Zinc transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001213 276.0
BYDH3_k127_10903019_6 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 GO:0000166,GO:0003674,GO:0003824,GO:0004107,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009423,GO:0009987,GO:0010181,GO:0016053,GO:0016829,GO:0016835,GO:0016838,GO:0019438,GO:0019752,GO:0032553,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050662,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 4.2.3.5 0.000000000000000000000000000000000000000000000000000004581 191.0
BYDH3_k127_10903019_7 - - - - 0.00000000000000017 80.0
BYDH3_k127_10957300_0 PIN domain K07175 - - 1.55e-242 754.0
BYDH3_k127_10957300_1 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007615 507.0
BYDH3_k127_10957300_2 TIGRFAM LAO AO transport system ATPase K07588 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003625 362.0
BYDH3_k127_10957300_3 CHASE2 domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003307 342.0
BYDH3_k127_10957300_4 Outer membrane cobalamin receptor protein K16092 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002358 286.0
BYDH3_k127_10957300_5 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002391 269.0
BYDH3_k127_10963580_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 1.148e-248 772.0
BYDH3_k127_10963580_1 PFAM Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002049 504.0
BYDH3_k127_10963580_2 PFAM (2R)-phospho-3-sulfolactate synthase ComA K08097 - 4.4.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000182 449.0
BYDH3_k127_10963580_3 Domain of unknown function (DUF368) K08974 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001847 370.0
BYDH3_k127_10963580_4 PFAM Shikimate dehydrogenase substrate binding domain K00014 - 1.1.1.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000001816 266.0
BYDH3_k127_1097527_0 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003813 487.0
BYDH3_k127_1097527_1 Pkd domain containing protein - - - 0.0000000000000007758 83.0
BYDH3_k127_1097527_2 DNA polymerase III alpha subunit K02337,K14162 - 2.7.7.7 0.00000006263 54.0
BYDH3_k127_1097527_3 2'-5' RNA ligase - - - 0.0000003276 59.0
BYDH3_k127_10989416_0 PFAM Cytochrome c assembly protein K02198 - - 1.098e-313 973.0
BYDH3_k127_10989416_1 Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH K02197 - - 0.000000000000000000000000000000000000000000000000007211 184.0
BYDH3_k127_10999511_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 2.271e-242 767.0
BYDH3_k127_10999511_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001077 402.0
BYDH3_k127_10999511_2 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004505 305.0
BYDH3_k127_10999511_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001043 259.0
BYDH3_k127_10999511_4 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000000000001772 204.0
BYDH3_k127_10999511_5 DinB family - - - 0.00000000000000000000000000000000000000000000002004 174.0
BYDH3_k127_11001868_0 PFAM Aminotransferase class I and II K00817 - 2.6.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009084 425.0
BYDH3_k127_11001868_1 Auxin Efflux Carrier K07088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004002 312.0
BYDH3_k127_11001868_2 Beta-lactamase - - - 0.000000000000000000000000000003703 122.0
BYDH3_k127_11001868_3 SnoaL-like domain - - - 0.0000001347 57.0
BYDH3_k127_11005149_0 homoserine kinase activity K02204 - 2.7.1.39 0.0 1244.0
BYDH3_k127_11005149_1 oxidoreductase activity, acting on CH-OH group of donors - - - 0.00000000000000000000000000000000000000000000000000000000000000000003175 239.0
BYDH3_k127_11005149_2 Raf kinase inhibitor-like protein K06910 - - 0.0000000000000000000000000000000000000000000000000000000000000002253 224.0
BYDH3_k127_11005149_3 CDP-alcohol phosphatidyltransferase K00995 - 2.7.8.5 0.00000000000000000000000000000000000000000000000001752 186.0
BYDH3_k127_11005149_4 Outer membrane efflux protein - - - 0.0000000000000000000000000000000002651 139.0
BYDH3_k127_11052422_0 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP K02837 - - 8.798e-238 745.0
BYDH3_k127_11052422_1 aldo keto reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002757 529.0
BYDH3_k127_11052422_2 Beta-lactamase enzyme family K17836 - 3.5.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002086 349.0
BYDH3_k127_11052422_3 Caspase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009693 305.0
BYDH3_k127_11052422_4 Pseudouridine synthase K06177,K06180 - 5.4.99.23,5.4.99.28,5.4.99.29 0.00000000000000000000000000000000000000000000000219 175.0
BYDH3_k127_11052422_5 Pseudouridine synthase K06177,K06180 - 5.4.99.23,5.4.99.28,5.4.99.29 0.000000000000000000000000000000000003345 139.0
BYDH3_k127_11052422_6 Heat shock 70 kDa protein K04043 - - 0.00000000000000000000000000000000008387 133.0
BYDH3_k127_11052422_7 - - - - 0.000000000000000000000000662 108.0
BYDH3_k127_11069826_0 WD40 repeats - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007544 417.0
BYDH3_k127_11069826_1 Outer membrane protein beta-barrel domain - - - 0.0000000000000000000000000000000000000000001801 172.0
BYDH3_k127_11138225_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005724 479.0
BYDH3_k127_11138225_1 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001269 356.0
BYDH3_k127_11138225_2 Response regulator of the LytR AlgR family K02477 - - 0.000007168 48.0
BYDH3_k127_11199680_0 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001237 390.0
BYDH3_k127_11199680_1 Domain of unknown function (DUF5009) - - - 0.000000000000000000000000001443 115.0
BYDH3_k127_11199680_2 PFAM Peptidase family M48 - - - 0.00000000000000002437 95.0
BYDH3_k127_11213050_0 ATP-dependent DNA helicase RecQ K03654 - 3.6.4.12 0.0 1127.0
BYDH3_k127_11213050_1 Belongs to the SIS family. GutQ KpsF subfamily K06041 - 5.3.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008767 476.0
BYDH3_k127_11213050_2 TIGRFAM mannose-1-phosphate guanylyltransferase mannose-6-phosphate isomerase K00971 - 2.7.7.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002517 451.0
BYDH3_k127_11213050_3 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03218,K03437 - 2.1.1.185 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000678 310.0
BYDH3_k127_11213050_4 - - - - 0.0000000000000000000000000000000000000000000000000000000003629 216.0
BYDH3_k127_11213050_5 Belongs to the GARS family K01945 - 6.3.4.13 0.00000000000000000000000000000000006459 135.0
BYDH3_k127_11217396_0 Belongs to the GPI family K01810 - 5.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006033 550.0
BYDH3_k127_11217396_1 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis K00850 - 2.7.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004532 497.0
BYDH3_k127_11217396_2 ROK family K00845 - 2.7.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004223 445.0
BYDH3_k127_11217396_3 Belongs to the glycosyl hydrolase 57 family - - - 0.00000001675 61.0
BYDH3_k127_11235860_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 0.0 1622.0
BYDH3_k127_11235860_1 PFAM Cytochrome c, class I - - - 1.411e-301 936.0
BYDH3_k127_11235860_2 Aldehyde dehydrogenase family K00131 - 1.2.1.9 2.493e-259 807.0
BYDH3_k127_11235860_3 Domain of Unknown Function (DUF1080) - - - 4.718e-203 651.0
BYDH3_k127_11235860_4 PFAM Peptidase family M20 M25 M40 K01436 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003569 592.0
BYDH3_k127_11235860_5 Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P) K07094 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002274 312.0
BYDH3_k127_11235860_6 Na+/Pi-cotransporter K14683 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000267 317.0
BYDH3_k127_11235860_7 Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate K01619 GO:0003674,GO:0003824,GO:0004139,GO:0005975,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009166,GO:0009262,GO:0009264,GO:0009987,GO:0016052,GO:0016829,GO:0016830,GO:0016832,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 4.1.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002946 299.0
BYDH3_k127_11235860_8 Acylphosphatase K01512 - 3.6.1.7 0.000000000000000000001602 96.0
BYDH3_k127_11235860_9 - - - - 0.000000000000000000003207 100.0
BYDH3_k127_11260989_0 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004186 558.0
BYDH3_k127_11260989_1 Metallopeptidase family M24 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003206 471.0
BYDH3_k127_11260989_2 TIGRFAM 1-acyl-sn-glycerol-3-phosphate acyltransferases K00655 - 2.3.1.51 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004207 285.0
BYDH3_k127_11260989_3 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000525 275.0
BYDH3_k127_11260989_4 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000000015 151.0
BYDH3_k127_11274676_0 Nucleoside H+ symporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001538 585.0
BYDH3_k127_11274676_1 Dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002223 401.0
BYDH3_k127_11274676_2 Gliding motility protein, GldB - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002002 378.0
BYDH3_k127_11274676_3 deoxynucleoside kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000124 311.0
BYDH3_k127_11295346_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01533,K17686 - 3.6.3.4,3.6.3.54 0.0 1057.0
BYDH3_k127_11295346_1 PFAM Glutamyl glutaminyl-tRNA synthetase, class Ic, catalytic domain K01886 - 6.1.1.18 2.146e-289 895.0
BYDH3_k127_11295346_2 Transcriptional regulator, Crp Fnr family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003052 248.0
BYDH3_k127_11295346_3 AcrB/AcrD/AcrF family - - - 0.0000000000000000000000000000000000000000000000000000000000119 207.0
BYDH3_k127_11295346_4 DinB superfamily - - - 0.000000000000000000000000000000000000001745 153.0
BYDH3_k127_11295346_5 Domain of unknown function (DUF4345) - - - 0.0000000000000000000000000000000003592 136.0
BYDH3_k127_11295346_6 PFAM Heavy-metal-associated domain - - - 0.000000000000000000001995 94.0
BYDH3_k127_11332585_0 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.0000000000000000000000000000000000000000000000000000000002503 205.0
BYDH3_k127_11332585_1 TIGRFAM gliding motility-associated lipoprotein GldD - - - 0.00000000000000000000000000000000000000001897 156.0
BYDH3_k127_11332585_2 A G-specific adenine glycosylase K03575 - - 0.000000000000000072 84.0
BYDH3_k127_11335913_0 pfam nipsnap - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003819 291.0
BYDH3_k127_11335913_1 Aminotransferase class-V - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004051 255.0
BYDH3_k127_1136797_0 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis K21071 - 2.7.1.11,2.7.1.90 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001612 562.0
BYDH3_k127_1136797_1 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine K07566 - 2.7.7.87 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004589 402.0
BYDH3_k127_1136797_2 pfam nudix - - - 0.00000000000000000000000000000000000000000000000001483 185.0
BYDH3_k127_1136797_3 Cell division protein - - - 0.000000000000000000000000000000000000000000001251 169.0
BYDH3_k127_11386191_0 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K16363 - 3.5.1.108,4.2.1.59 2.075e-249 774.0
BYDH3_k127_11386191_1 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity K07456 - - 1.969e-239 764.0
BYDH3_k127_11386191_2 SMART Metal-dependent phosphohydrolase, HD region K06885 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002622 523.0
BYDH3_k127_11386191_3 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000709 501.0
BYDH3_k127_11386191_4 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006985 427.0
BYDH3_k127_11386191_5 protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005554 335.0
BYDH3_k127_11386191_6 PFAM ABC transporter K02193 - 3.6.3.41 0.000000000000000000000000000000000000000000000000000000000000006676 222.0
BYDH3_k127_11386191_7 Domain of unknown function (DUF4296) - - - 0.000000000000000004237 90.0
BYDH3_k127_11397417_0 Domain of unknown function (DUF5117) - - - 0.0 1112.0
BYDH3_k127_11397417_1 Asparaginyl-tRNA synthetase K01893 - 6.1.1.22 2.069e-225 706.0
BYDH3_k127_11397417_2 RNA polymerase, sigma-54 factor K03092 - - 4.525e-220 692.0
BYDH3_k127_11397417_3 enoyl-CoA hydratase isomerase family K15866 - 5.3.3.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002431 402.0
BYDH3_k127_11397417_4 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000002922 225.0
BYDH3_k127_11397417_5 Outer membrane protein beta-barrel domain - - - 0.0000000000000000000000000000000000000000000000003363 184.0
BYDH3_k127_11397417_6 phosphoesterase, PA-phosphatase related - - - 0.000000000000000000000007156 109.0
BYDH3_k127_11397417_7 universal stress protein - - - 0.000002697 53.0
BYDH3_k127_11408061_0 DJ-1/PfpI family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001938 426.0
BYDH3_k127_11408061_1 COG1670 acetyltransferases, including N-acetylases of ribosomal proteins K01163,K03790 - 2.3.1.128 0.000000000000000002977 89.0
BYDH3_k127_11417347_0 Deoxyguanosinetriphosphate triphosphohydrolase-like protein K01129 - 3.1.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004228 529.0
BYDH3_k127_11417347_1 Scramblase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000533 233.0
BYDH3_k127_11434865_0 Glycosyl hydrolase family 3 N terminal domain - - - 1.572e-256 822.0
BYDH3_k127_11434865_1 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 1.041e-235 743.0
BYDH3_k127_11434865_2 PFAM Rhomboid family K09650 - 3.4.21.105 0.00000000000000000000000000000000000000000000000000000002377 202.0
BYDH3_k127_11434865_3 PFAM Rhomboid family - - - 0.00000000000000000000000000000003872 128.0
BYDH3_k127_11434865_4 PFAM Glycosyl transferases group 1 K00754 - - 0.0000000000000000000000000001342 114.0
BYDH3_k127_11434865_5 - - - - 0.0000000548 59.0
BYDH3_k127_11458286_0 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001169 511.0
BYDH3_k127_11458286_1 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine K03648 GO:0003674,GO:0003824,GO:0004844,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006285,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097506,GO:0097510,GO:0140097,GO:1901360 3.2.2.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004145 364.0
BYDH3_k127_11458286_2 nuclear chromosome segregation K09892 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005346 341.0
BYDH3_k127_11458286_3 Protein of unknown function, DUF547 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001396 295.0
BYDH3_k127_11458286_4 protein affecting Mg2 Co2 transport K06195 - - 0.000000000000000000000000000000000000000000000000000000000000003561 218.0
BYDH3_k127_11458286_5 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000002734 209.0
BYDH3_k127_11458286_6 Binds together with S18 to 16S ribosomal RNA K02990 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0019843,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070181,GO:0097159,GO:1901363,GO:1990904 - 0.0000000000000000000000000000000000000000000002178 169.0
BYDH3_k127_11458286_7 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000003811 145.0
BYDH3_k127_11461602_0 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 1.27e-203 642.0
BYDH3_k127_11461602_1 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000000000000000009828 224.0
BYDH3_k127_11461602_2 1-aminocyclopropane-1-carboxylate deaminase K01505 - 3.5.99.7 0.00000000000000000000000000000000000000000000006509 172.0
BYDH3_k127_1146899_0 Tetratricopeptide repeats - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001509 480.0
BYDH3_k127_1146899_1 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004587 376.0
BYDH3_k127_1146899_2 PFAM Peptidase family M23 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002096 326.0
BYDH3_k127_1146899_3 Polymer-forming cytoskeletal - - - 0.000000000000000000000000000000000000000000000000000001881 194.0
BYDH3_k127_1146899_4 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter - - - 0.000000003651 59.0
BYDH3_k127_11471501_0 Diacylglycerol kinase catalytic domain - - - 0.00000000000000000000000000000000000000007731 162.0
BYDH3_k127_11471501_1 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000001504 129.0
BYDH3_k127_11471501_2 RDD family - - - 0.00000000000000000000000000000002845 132.0
BYDH3_k127_11471501_3 DinB family - - - 0.0000000000000000001321 94.0
BYDH3_k127_11519701_0 Sortilin, neurotensin receptor 3, - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004993 562.0
BYDH3_k127_11519701_1 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008857 465.0
BYDH3_k127_11519701_2 BNR Asp-box repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002755 250.0
BYDH3_k127_11566807_0 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000426 569.0
BYDH3_k127_11566807_1 protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001219 261.0
BYDH3_k127_11566807_2 Protein of unknown function (DUF3276) - - - 0.00000000000000000000000000000000000000000000000037 177.0
BYDH3_k127_11566807_3 PFAM CRISPR associated protein Cas6 K19091 - - 0.00000000000000000000000000000000006556 135.0
BYDH3_k127_11566807_4 PFAM Transposase IS200 like - - - 0.000000001611 61.0
BYDH3_k127_11580669_0 Aminotransferase class-V - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003595 506.0
BYDH3_k127_11580669_1 Pirin C-terminal cupin domain K06911 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009381 500.0
BYDH3_k127_11580669_2 Domain of Unknown Function (DUF1080) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001165 384.0
BYDH3_k127_11580669_3 membrane protein, hemolysin III homolog K11068 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001925 256.0
BYDH3_k127_11580669_4 PFAM PBS lyase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003678 249.0
BYDH3_k127_11600112_0 GDSL-like Lipase/Acylhydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004552 409.0
BYDH3_k127_11600112_1 PFAM NUDIX hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005526 287.0
BYDH3_k127_11600112_2 Histidinol phosphatase and related hydrolases of the PHP family - - - 0.0000000000000001272 81.0
BYDH3_k127_11605802_0 Beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003391 523.0
BYDH3_k127_11605802_1 Alpha beta hydrolase K07002 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008287 270.0
BYDH3_k127_11605802_2 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000000000008104 188.0
BYDH3_k127_11605802_3 Domain of unknown function (DUF4886) - - - 0.000000000006651 75.0
BYDH3_k127_11633743_0 Belongs to the type-B carboxylesterase lipase family K03929 - - 2.056e-271 842.0
BYDH3_k127_11633743_1 Alpha beta hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005143 572.0
BYDH3_k127_11633743_2 fructose 1,6-bisphosphate 1-phosphatase activity K03841 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005984,GO:0005985,GO:0005986,GO:0005996,GO:0006000,GO:0006002,GO:0006006,GO:0006094,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009058,GO:0009311,GO:0009312,GO:0009987,GO:0016043,GO:0016051,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019203,GO:0019318,GO:0019319,GO:0019637,GO:0022607,GO:0030388,GO:0034637,GO:0042132,GO:0042578,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044262,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046351,GO:0046364,GO:0050308,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0065003,GO:0071704,GO:0071840,GO:1901135,GO:1901576 3.1.3.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001522 401.0
BYDH3_k127_11633743_3 ADP-heptose-lipopolysaccharide heptosyltransferase activity K02843 - - 0.000000000000000000000000000000000000000000000000000000000000000008353 231.0
BYDH3_k127_11633743_4 Domain of unknown function (DUF4440) - - - 0.00000000000000000000000000000000000000000000000000000000000000001441 228.0
BYDH3_k127_11633743_5 ADP-heptose-lipopolysaccharide heptosyltransferase activity K02843 - - 0.00000000000000000000000000000000000000000000005899 170.0
BYDH3_k127_11633743_7 Transferase K02527,K03439 GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008176,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0034708,GO:0036265,GO:0043170,GO:0043412,GO:0043414,GO:0043527,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0106004,GO:0140098,GO:0140101,GO:1901360,GO:1902494,GO:1990234 2.1.1.33,2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.0000000000000000000000007366 105.0
BYDH3_k127_11633743_8 Protein of unknown function (DUF3788) - - - 0.00000000000000000000002309 104.0
BYDH3_k127_11634310_0 belongs to the imidazoleglycerol-phosphate dehydratase family K01089,K01693 GO:0000105,GO:0003674,GO:0003824,GO:0004424,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 3.1.3.15,4.2.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002682 538.0
BYDH3_k127_11634310_1 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 GO:0000105,GO:0003674,GO:0003824,GO:0004399,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0052803,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000717 511.0
BYDH3_k127_11634310_2 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001259 407.0
BYDH3_k127_11634310_3 ATP phosphoribosyltransferase K00765 GO:0000105,GO:0003674,GO:0003824,GO:0003879,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001023 402.0
BYDH3_k127_11634310_4 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 GO:0000107,GO:0003674,GO:0003824,GO:0016740,GO:0016757,GO:0016763 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004168 383.0
BYDH3_k127_11634310_5 1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase K01814 GO:0000105,GO:0000162,GO:0003674,GO:0003824,GO:0003949,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006547,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005842 290.0
BYDH3_k127_11634310_6 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000153 260.0
BYDH3_k127_11634310_7 Belongs to the PRA-CH family K11755 - 3.5.4.19,3.6.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000009467 246.0
BYDH3_k127_11637075_0 Belongs to the transferase hexapeptide repeat family K00674 - 2.3.1.117 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009064 441.0
BYDH3_k127_11637075_1 PFAM Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002561 318.0
BYDH3_k127_11637075_2 Iron dependent repressor, metal binding and dimerisation domain K03709 - - 0.000000000000000000000000000000000000000000000000000000000000000000005429 238.0
BYDH3_k127_1164369_0 esterase - - - 6.139e-279 867.0
BYDH3_k127_1164369_1 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 - 4.2.1.2 9.56e-258 799.0
BYDH3_k127_1164369_10 PFAM Yqey-like protein K09117 - - 0.000000000000000000000000000000000000000000000000000001256 195.0
BYDH3_k127_1164369_11 Stage II sporulation protein E (SpoIIE) - - - 0.000000000000000000000000000000000000000000000000005623 192.0
BYDH3_k127_1164369_12 monooxygenase activity - - - 0.0000000000000000000000000000000000000000000488 164.0
BYDH3_k127_1164369_13 Late embryogenesis abundant protein - - - 0.00000000000000000000000000000005534 130.0
BYDH3_k127_1164369_14 Colicin V production protein K03558 - - 0.00000000000000000000000000001861 124.0
BYDH3_k127_1164369_15 helix_turn_helix, Lux Regulon - - - 0.0000000000359 68.0
BYDH3_k127_1164369_2 PFAM GH3 auxin-responsive promoter - - - 5.018e-252 785.0
BYDH3_k127_1164369_3 single-stranded-DNA-specific exonuclease RecJ K07462 - - 1.587e-213 678.0
BYDH3_k127_1164369_4 Peptidase S9, prolyl oligopeptidase active site domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003076 454.0
BYDH3_k127_1164369_5 ABC transporter K06861 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001768 402.0
BYDH3_k127_1164369_6 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008614,GO:0008615,GO:0009058,GO:0009110,GO:0009987,GO:0016740,GO:0016769,GO:0017144,GO:0018130,GO:0019438,GO:0033856,GO:0034641,GO:0042364,GO:0042816,GO:0042819,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072524,GO:0072525,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 2.6.99.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001706 370.0
BYDH3_k127_1164369_7 alpha/beta hydrolase fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001845 289.0
BYDH3_k127_1164369_8 Prolyl 4-hydroxylase alpha subunit homologues. K07394 - - 0.0000000000000000000000000000000000000000000000000000000000000000008219 233.0
BYDH3_k127_1164369_9 - - - - 0.000000000000000000000000000000000000000000000000000000000000005785 222.0
BYDH3_k127_11667204_0 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573,K12585 - - 3.96e-300 935.0
BYDH3_k127_11667204_1 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002479 554.0
BYDH3_k127_11667204_2 Aminotransferase class-V - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002173 393.0
BYDH3_k127_11667204_3 Belongs to the FPP GGPP synthase family K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007145 390.0
BYDH3_k127_11667204_4 Involved in the tonB-independent uptake of proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001407 250.0
BYDH3_k127_11667204_5 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K01759,K03827 - 4.4.1.5 0.0000000000000000000000000000000000000000000000004308 177.0
BYDH3_k127_11667204_6 COGs COG0607 Rhodanese-related sulfurtransferase - - - 0.000000000000000000005776 96.0
BYDH3_k127_11667204_7 Domain of unknown function (DU1801) - - - 0.0000001212 58.0
BYDH3_k127_11707446_0 Peptidase family M50 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002983 485.0
BYDH3_k127_11707446_1 TIGRFAM haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED K20866 - 3.1.3.10 0.00000000000000000000000000000000000000000000000009725 184.0
BYDH3_k127_11707446_2 Psort location CytoplasmicMembrane, score 10.00 - - - 0.0000000000000000000000000000000000000000000000001338 181.0
BYDH3_k127_11716985_0 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002195 640.0
BYDH3_k127_11716985_1 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002699 537.0
BYDH3_k127_11716985_2 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000000000000000000000007076 185.0
BYDH3_k127_11716985_3 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000001141 145.0
BYDH3_k127_11716985_4 Histidine kinase - - - 0.0006089 44.0
BYDH3_k127_11718890_0 Protein of unknown function (DUF1549) - - - 0.0 1077.0
BYDH3_k127_11718890_1 Protein of unknown function (DUF1501) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001381 542.0
BYDH3_k127_11733921_0 PFAM Peptidase M1, membrane alanine aminopeptidase K01256 - 3.4.11.2 2.47e-242 763.0
BYDH3_k127_11733921_1 PFAM Major Facilitator Superfamily K02429 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006552 488.0
BYDH3_k127_11733921_10 - - - - 0.000000000000003525 82.0
BYDH3_k127_11733921_11 Domain of Unknown Function (DUF1080) - - - 0.00000000000228 66.0
BYDH3_k127_11733921_12 PFAM fumarylacetoacetate (FAA) hydrolase - - - 0.0000000001711 62.0
BYDH3_k127_11733921_13 - - - - 0.000006165 53.0
BYDH3_k127_11733921_3 Domain of Unknown Function (DUF1080) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002102 381.0
BYDH3_k127_11733921_4 PFAM Fumarylacetoacetate (FAA) hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001227 364.0
BYDH3_k127_11733921_5 amidohydrolase K07046 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002622 349.0
BYDH3_k127_11733921_6 short-chain dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004027 341.0
BYDH3_k127_11733921_7 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002821 255.0
BYDH3_k127_11733921_8 Thioredoxin-like - - - 0.00000000000000000000000000000000000000000004393 168.0
BYDH3_k127_11733921_9 - - - - 0.0000000000000006288 89.0
BYDH3_k127_11836832_0 Type IIA topoisomerase (DNA gyrase topo II topoisomerase IV) B subunit K02622 - - 4.739e-207 649.0
BYDH3_k127_11836832_1 PFAM Fatty acid hydroxylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001876 457.0
BYDH3_k127_11836832_2 - - - - 0.000002317 55.0
BYDH3_k127_11865723_0 Belongs to the ATCase OTCase family K09065,K13043 GO:0000050,GO:0003674,GO:0003824,GO:0004585,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0016743,GO:0019627,GO:0019752,GO:0034641,GO:0042450,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.3.11,2.1.3.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001175 490.0
BYDH3_k127_11865723_1 PFAM Peptidase family M20 M25 M40 K01438 - 3.5.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003138 475.0
BYDH3_k127_11865723_2 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 GO:0003674,GO:0003824,GO:0003991,GO:0005488,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016597,GO:0016740,GO:0016772,GO:0016774,GO:0019752,GO:0031406,GO:0034618,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009669 317.0
BYDH3_k127_11865723_3 PFAM NUDIX hydrolase - - - 0.000000236 52.0
BYDH3_k127_1186924_0 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001007 548.0
BYDH3_k127_1186924_1 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000602 393.0
BYDH3_k127_1186924_2 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004349 290.0
BYDH3_k127_11886564_0 Aminopeptidase N - - - 0.0 1014.0
BYDH3_k127_11886564_1 Aminopeptidase N - - - 1.699e-286 890.0
BYDH3_k127_11886564_2 Aminopeptidase N - - - 0.00000000000000000000000000000000000000000000000002407 184.0
BYDH3_k127_11933855_0 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 2.514e-221 692.0
BYDH3_k127_11933855_2 cellulose binding - - - 0.00000001764 68.0
BYDH3_k127_11961358_0 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 3.107e-228 716.0
BYDH3_k127_11961358_1 TIGRFAM cell shape determining protein, MreB Mrl family K03569 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007743 530.0
BYDH3_k127_11961358_2 PFAM Aminotransferase, class I K14287 - 2.6.1.88 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005829 460.0
BYDH3_k127_11961358_3 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K13566 - 3.5.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008081 339.0
BYDH3_k127_11961358_4 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001083 269.0
BYDH3_k127_11961358_5 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 GO:0000966,GO:0000967,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 - 0.000000000000000000000000000000000000000000005395 167.0
BYDH3_k127_11961358_6 Di-iron-containing protein involved in the repair of iron-sulfur clusters K07322 - - 0.00000000000000000000000007349 109.0
BYDH3_k127_11966344_0 permease - - - 6.188e-287 902.0
BYDH3_k127_11966344_1 FtsX-like permease family - - - 1.129e-195 627.0
BYDH3_k127_11966344_2 FtsX-like permease family - - - 0.00000000000000000000000000000000000000000000000000000000883 201.0
BYDH3_k127_11969125_0 CarboxypepD_reg-like domain - - - 3.115e-306 962.0
BYDH3_k127_11969125_1 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002006 283.0
BYDH3_k127_11969125_2 Essential for recycling GMP and indirectly, cGMP K00942 GO:0003674,GO:0003824,GO:0004385,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009126,GO:0009132,GO:0009135,GO:0009150,GO:0009161,GO:0009165,GO:0009167,GO:0009179,GO:0009185,GO:0009259,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0042278,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046037,GO:0046128,GO:0046483,GO:0046710,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.4.8 0.0000000000000000000000000000000000000000000000000000000000000000004751 230.0
BYDH3_k127_11969125_3 Rhodanese Homology Domain K06917 - - 0.0000000000000004259 78.0
BYDH3_k127_11986433_0 Protein of unknown function (DUF1501) - - - 1.437e-256 801.0
BYDH3_k127_11986433_1 Protein of unknown function (DUF1800) - - - 5.706e-197 630.0
BYDH3_k127_11986433_2 Isopropylmalate homocitrate citramalate synthase K01640 - 4.1.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006648 274.0
BYDH3_k127_11986433_3 Outer membrane protein beta-barrel domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001205 277.0
BYDH3_k127_11986433_4 - - - - 0.000000000000000000000000000000000000000000000000000003089 196.0
BYDH3_k127_11986433_5 Hydroxymethylglutaryl-CoA lyase K01640 - 4.1.3.4 0.000000000000000000000000006179 111.0
BYDH3_k127_11986433_6 TIGRFAM DNA protecting protein DprA K04096 - - 0.0002543 44.0
BYDH3_k127_12004111_0 Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC) K02551 - 2.2.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003297 572.0
BYDH3_k127_12004111_1 Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA) K01661 - 4.1.3.36 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001358 456.0
BYDH3_k127_12004111_2 PFAM chorismate binding enzyme K02361,K02552 - 5.4.4.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002965 347.0
BYDH3_k127_12005519_0 Maltogenic Amylase, C-terminal domain K05343 - 3.2.1.1,5.4.99.16 0.0 1248.0
BYDH3_k127_12005519_1 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 4.981e-306 949.0
BYDH3_k127_12005519_2 Belongs to the glycosyl hydrolase 57 family - - - 1.161e-276 868.0
BYDH3_k127_12005519_3 Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1- 4)- glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB K16147 - 2.4.99.16 0.000000000000000000000000000000000000000003541 159.0
BYDH3_k127_1200680_0 Fibronectin-binding protein A N-terminus (FbpA) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003489 456.0
BYDH3_k127_1200680_1 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.5.1.75 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005311 372.0
BYDH3_k127_1200680_2 of the beta-lactamase superfamily I K06167 - 3.1.4.55 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004084 358.0
BYDH3_k127_1200680_3 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001504 292.0
BYDH3_k127_1200680_4 PFAM sulfatase K01130 - 3.1.6.1 0.0000000000000000000000000000000000000000000000000000000000000001593 229.0
BYDH3_k127_1200680_5 - - - - 0.000000000000000000000000000000142 127.0
BYDH3_k127_12010105_0 CotH kinase protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001765 615.0
BYDH3_k127_12010105_1 Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001784 381.0
BYDH3_k127_12010105_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K01993 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000009918 274.0
BYDH3_k127_12010105_3 C4-dicarboxylate anaerobic carrier - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002099 259.0
BYDH3_k127_12038173_0 Domain of Unknown Function (DUF1080) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006714 339.0
BYDH3_k127_12038173_1 Dienelactone hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003285 326.0
BYDH3_k127_12038173_2 NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form K12410 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008253 312.0
BYDH3_k127_12038173_3 Protein of unknown function (DUF3995) - - - 0.00000000000000000000000000000000000000000001272 166.0
BYDH3_k127_12038173_4 - - - - 0.00001512 48.0
BYDH3_k127_12047730_0 Rieske [2Fe-2S] domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007875 331.0
BYDH3_k127_12047730_1 DNA polymerase Ligase (LigD) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008016 293.0
BYDH3_k127_12047730_2 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system K19166 - - 0.00000000000000000000000000000001001 130.0
BYDH3_k127_12047730_3 transcription regulator containing HTH domain K18831 - - 0.0000000000000000000002121 100.0
BYDH3_k127_12047730_4 Outer membrane protein beta-barrel domain - - - 0.000000000008642 75.0
BYDH3_k127_12047730_5 - - - - 0.0000002191 61.0
BYDH3_k127_12126326_0 Outer membrane receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003288 486.0
BYDH3_k127_12126326_1 PFAM Periplasmic binding protein LacI transcriptional regulator K02529,K05499 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006833 414.0
BYDH3_k127_12161096_0 Protein of unknown function (DUF1553) - - - 0.0 1081.0
BYDH3_k127_12161096_1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain K01921 - 6.3.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007016 603.0
BYDH3_k127_12161096_2 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain K01921 - 6.3.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003268 397.0
BYDH3_k127_12161096_3 Protein of unknown function (DUF1501) - - - 0.000000000000000000000000000000000000000001147 158.0
BYDH3_k127_12191044_0 Universal stress protein - - - 0.00000000000000000000000000000000000001557 155.0
BYDH3_k127_12191044_1 FKBP-type peptidyl-prolyl cis-trans isomerase - - - 0.000000000000000000000001871 114.0
BYDH3_k127_12206396_0 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001206 508.0
BYDH3_k127_12206396_1 PFAM Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001314 441.0
BYDH3_k127_12206396_2 PFAM Uncharacterised protein family UPF0029, Impact, N-terminal - - - 0.00000000000000000000000000000000000000000000000000000000000164 215.0
BYDH3_k127_12206396_3 PFAM YhhN-like protein - - - 0.0000000000000000000000000000000000000000000000004429 184.0
BYDH3_k127_12206396_4 MgtC family K07507 - - 0.0000000000000000000000000000000000000000002993 166.0
BYDH3_k127_12206396_5 Putative auto-transporter adhesin, head GIN domain - - - 0.000000000000000000000000000008807 129.0
BYDH3_k127_12216023_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072,K12257 - - 0.0 1058.0
BYDH3_k127_12216023_1 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003107 299.0
BYDH3_k127_12216023_2 signal transduction histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003377 273.0
BYDH3_k127_12223846_0 Serine carboxypeptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001774 444.0
BYDH3_k127_12223846_1 serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000007605 170.0
BYDH3_k127_12223846_2 TIR domain - - - 0.000002267 60.0
BYDH3_k127_12237365_0 WD40 repeats - - - 0.0 1027.0
BYDH3_k127_12237365_1 - Catabolite gene activator and regulatory subunit of cAMP-dependent protein - - - 6.312e-315 995.0
BYDH3_k127_12237365_10 Lipopolysaccharide-assembly - - - 0.0000000000000000000000000000000000002886 147.0
BYDH3_k127_12237365_11 - - - - 0.00000000000000000000000000000001199 138.0
BYDH3_k127_12237365_12 Outer membrane protein beta-barrel domain - - - 0.00000000000000000000000000000002823 140.0
BYDH3_k127_12237365_13 PFAM Preprotein translocase SecG subunit K03075 - - 0.0000000000000000000000000011 115.0
BYDH3_k127_12237365_14 Endonuclease Exonuclease Phosphatase - - - 0.0000000000000000000001708 107.0
BYDH3_k127_12237365_2 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0016465,GO:0032991,GO:0044183,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051082,GO:0061077,GO:0101031,GO:1990220 - 1.996e-277 860.0
BYDH3_k127_12237365_3 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 6.382e-230 719.0
BYDH3_k127_12237365_4 sigma54 specific, transcriptional regulator, Fis family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008235 600.0
BYDH3_k127_12237365_5 carbonic anhydrase acetyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000028 284.0
BYDH3_k127_12237365_6 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001709 286.0
BYDH3_k127_12237365_7 - - - - 0.000000000000000000000000000000000000000000000000000000001417 205.0
BYDH3_k127_12237365_8 PFAM Outer membrane chaperone Skp (OmpH) K06142 - - 0.00000000000000000000000000000000000000000000000001752 186.0
BYDH3_k127_12237365_9 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 GO:0003674,GO:0005488,GO:0005515,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008150,GO:0009987,GO:0010033,GO:0035966,GO:0042221,GO:0043167,GO:0043169,GO:0046872,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0061077 - 0.000000000000000000000000000000000000000003996 155.0
BYDH3_k127_12258828_0 Xylose isomerase-like TIM barrel - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005044 302.0
BYDH3_k127_12258828_1 PQQ-like domain K17760 - 1.1.9.1 0.00000000000000000000000000000000000000000000000001004 190.0
BYDH3_k127_12295306_0 acyl-CoA dehydrogenase - - - 4.455e-286 887.0
BYDH3_k127_12295306_1 Belongs to the thiolase family K00632 - 2.3.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003304 306.0
BYDH3_k127_12295306_2 S23 ribosomal protein - - - 0.00000000000000000000000000000000000000008728 153.0
BYDH3_k127_12309925_0 FtsX-like permease family - - - 6.21e-296 927.0
BYDH3_k127_12309925_1 Transport of potassium into the cell K03549 - - 4.786e-227 721.0
BYDH3_k127_12309925_2 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006702 575.0
BYDH3_k127_12309925_4 FtsX-like permease family - - - 0.00000000001744 64.0
BYDH3_k127_12310636_0 Rhodanese Homology Domain K01069 - 3.1.2.6 2.473e-248 773.0
BYDH3_k127_12310636_1 Membrane dipeptidase (Peptidase family M19) K01273 - 3.4.13.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001506 475.0
BYDH3_k127_12310636_2 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000001003 207.0
BYDH3_k127_12310636_3 Belongs to the thioredoxin family - - - 0.00000000000000000000000000000000000000000000000000117 185.0
BYDH3_k127_12354178_0 COGs COG1033 exporter of the RND superfamily protein K07003 - - 6.975e-265 838.0
BYDH3_k127_12354178_1 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 GO:0003674,GO:0003824,GO:0004812,GO:0004822,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006428,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021 340.0
BYDH3_k127_12354178_2 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 GO:0003674,GO:0003824,GO:0004812,GO:0004822,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006428,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.5 0.000000000000000000000000000000000000000000000000000000000000000000001335 239.0
BYDH3_k127_12354178_3 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 GO:0003674,GO:0003824,GO:0004812,GO:0004822,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006428,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.5 0.00000000000000000000000000000000000000000000000000000000000000004139 224.0
BYDH3_k127_12357813_0 TIGRFAM FeS assembly protein SufB K09014 - - 8.379e-279 860.0
BYDH3_k127_12357813_1 Acyl-CoA synthetase (AMP-forming) AMP-acid ligase II K01897 - 6.2.1.3 1.01e-253 795.0
BYDH3_k127_12357813_2 helix_turn_helix ASNC type K03718 - - 0.0000000000000000000000000000000000000000000000000000000000000000006145 231.0
BYDH3_k127_12357813_3 23S rRNA-intervening sequence protein - - - 0.000000000000000000000000000000000000000002842 159.0
BYDH3_k127_12357813_4 transferase activity, transferring glycosyl groups K00754 - - 0.00000000000000000000000000000003485 129.0
BYDH3_k127_12386341_0 ABC transporter K15738 - - 3.193e-210 666.0
BYDH3_k127_12386341_1 unusual protein kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005368 559.0
BYDH3_k127_12386341_2 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001719 363.0
BYDH3_k127_12386341_3 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000000000000000000000000000000001794 198.0
BYDH3_k127_12386341_4 - - - - 0.0000000000000000000000000000000000000000000000000007114 188.0
BYDH3_k127_12386341_5 Protein of unknown function (DUF3667) - - - 0.0000000000000000000000009645 114.0
BYDH3_k127_12517603_0 Predicted permease K07089 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005765 454.0
BYDH3_k127_12517603_1 - K07112 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001886 415.0
BYDH3_k127_12517603_2 Alpha-acetolactate decarboxylase K01575 - 4.1.1.5 0.00000000000000000000000000000000000000000000000000000000000206 216.0
BYDH3_k127_12517603_3 Protein of unknown function (DUF664) - - - 0.0000000000000000000000000000000000000000000000001059 179.0
BYDH3_k127_12517603_4 - - - - 0.000000000000000000000000000000000000000000139 173.0
BYDH3_k127_12546517_0 Protein conserved in bacteria K09934 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003752 597.0
BYDH3_k127_12546517_1 RNA ligase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000007443 269.0
BYDH3_k127_12546517_2 Superinfection exclusion protein, bacteriophage P22 - - - 0.000000000000000000000000008395 112.0
BYDH3_k127_12546517_4 - - - - 0.0000000000000000000001932 101.0
BYDH3_k127_12546517_5 nuclease K01174 - 3.1.31.1 0.0000000000002886 75.0
BYDH3_k127_12546517_8 - - - - 0.00006689 49.0
BYDH3_k127_12549003_0 - Catabolite gene activator and regulatory subunit of cAMP-dependent protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003687 486.0
BYDH3_k127_12549003_1 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009253 434.0
BYDH3_k127_12549003_2 PFAM Mandelate racemase muconate lactonizing enzyme, C-terminal domain - - - 0.000000000000000000007243 93.0
BYDH3_k127_12549003_3 PFAM Mandelate racemase muconate lactonizing enzyme, C-terminal domain - - - 0.00000000000000008033 84.0
BYDH3_k127_12557220_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001134 473.0
BYDH3_k127_12557220_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005114 383.0
BYDH3_k127_12557220_2 - - - - 0.000000000000000000000000001238 122.0
BYDH3_k127_12575919_0 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007872 267.0
BYDH3_k127_12575919_1 pfam nudix - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002954 251.0
BYDH3_k127_12575919_2 efflux protein, MATE family K03327 - - 0.000000000000000000000000000000000000000000000001959 180.0
BYDH3_k127_12575919_3 Protein of unknown function (DUF3667) - - - 0.00000000000000000000000007822 117.0
BYDH3_k127_12591094_0 C-terminal domain of CHU protein family - - - 1.182e-204 668.0
BYDH3_k127_12591094_1 Peptidase dimerisation domain K12941 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000159 304.0
BYDH3_k127_12591094_2 TIGRFAM riboflavin synthase, alpha subunit K00793 - 2.5.1.9 0.000000000000000000000000000000000000000000003883 166.0
BYDH3_k127_12591094_3 - - - - 0.00000000000001544 79.0
BYDH3_k127_12617241_0 May be involved in recombinational repair of damaged DNA K03631 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007587 536.0
BYDH3_k127_12617241_1 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006779 527.0
BYDH3_k127_12617241_2 Domain of unknown function (DUF4835) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001637 381.0
BYDH3_k127_12617241_3 TIGRFAM Outer membrane assembly lipoprotein YfiO K05807 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007098 302.0
BYDH3_k127_12617241_4 OstA-like protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000331 289.0
BYDH3_k127_12617241_5 - - - - 0.0000000000000000000000000000000000000000000000000007536 191.0
BYDH3_k127_12617241_6 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits - - - 0.00000000000000000000000000000000000000002046 154.0
BYDH3_k127_12624737_0 ABC transporter transmembrane region K18889 - - 1.6e-270 844.0
BYDH3_k127_12624737_2 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.0000000000000000000000000000000000000000000007654 175.0
BYDH3_k127_12640058_0 AMP-binding enzyme C-terminal domain K00666 - - 5.116e-229 721.0
BYDH3_k127_12640058_1 COG1228 Imidazolonepropionase and related - - - 0.00000000000000000000000000000000008057 134.0
BYDH3_k127_12640058_2 PA domain - - - 0.00000000000003972 74.0
BYDH3_k127_1264093_0 transcriptional regulator - - - 0.0000000000000000000000000000003081 130.0
BYDH3_k127_1264093_1 Domain of unknown function (DUF4251) - - - 0.0000000000000000000000000001754 120.0
BYDH3_k127_1264093_2 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0000000000000000000000006943 104.0
BYDH3_k127_1264093_3 Sulfatase - - - 0.000000000000000001002 86.0
BYDH3_k127_12641925_0 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00821 - 2.6.1.11,2.6.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002953 571.0
BYDH3_k127_12641925_1 TRAP transporter, solute receptor (TAXI family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001878 419.0
BYDH3_k127_12641925_2 AI-2E family transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001177 266.0
BYDH3_k127_12641925_3 Domain of unknown function (DUF4421) - - - 0.00000000000000000000000000000000000000000000000003003 191.0
BYDH3_k127_12641925_4 - - - - 0.0000000000000000000000000000000000000001186 165.0
BYDH3_k127_12643961_0 PAS fold - - - 6.166e-235 737.0
BYDH3_k127_12643961_1 cheY-homologous receiver domain - - - 0.00000000000000000000000000000000000000000000000000000000000004945 216.0
BYDH3_k127_12643961_3 - - - - 0.0000000000000000000000000000000000000000000009704 169.0
BYDH3_k127_12643961_5 - - - - 0.00000000000000001866 82.0
BYDH3_k127_12643961_6 - - - - 0.00000004449 59.0
BYDH3_k127_12701655_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 1.366e-224 700.0
BYDH3_k127_12701655_1 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004423 492.0
BYDH3_k127_12701655_2 FGGY family of carbohydrate kinases, C-terminal domain K00851 - 2.7.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000169 429.0
BYDH3_k127_12701655_3 Putative neutral zinc metallopeptidase K07054 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003255 380.0
BYDH3_k127_12701655_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006691 312.0
BYDH3_k127_12701655_5 6-phosphogluconate dehydrogenase K00033 - 1.1.1.343,1.1.1.44 0.0000000000000000000000000000000000000000000000000000000000000000003428 233.0
BYDH3_k127_12701655_6 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000004174 214.0
BYDH3_k127_12701655_7 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000003068 198.0
BYDH3_k127_12701655_8 23S rRNA-intervening sequence protein - - - 0.00000000000000000000000000007933 119.0
BYDH3_k127_12701655_9 Domain of unknown function (DU1801) - - - 0.000000000000000000002095 94.0
BYDH3_k127_12705016_0 Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively K01556 - 3.7.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007815 550.0
BYDH3_k127_12705016_1 Catalyzes the hydroxylation of L-kynurenine (L-Kyn) to form 3-hydroxy-L-kynurenine (L-3OHKyn). Required for synthesis of quinolinic acid K00486 - 1.14.13.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001021 362.0
BYDH3_k127_12705016_2 Catalyzes the oxidative ring opening of 3- hydroxyanthranilate to 2-amino-3-carboxymuconate semialdehyde, which spontaneously cyclizes to quinolinate K00452 - 1.13.11.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000664 280.0
BYDH3_k127_12705016_3 Transposase IS200 like - - - 0.00000000000000000000000000000000000000000000002349 177.0
BYDH3_k127_12705016_4 Putative zinc ribbon domain - - - 0.000000000000000000000000000000002968 130.0
BYDH3_k127_12705016_5 PFAM Short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.00002032 48.0
BYDH3_k127_128151_0 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001125 319.0
BYDH3_k127_128151_1 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003413 302.0
BYDH3_k127_128151_2 - - - - 0.0000000008937 66.0
BYDH3_k127_128151_3 - - - - 0.00004626 46.0
BYDH3_k127_12825532_0 arsenical-resistance protein K03325 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001818 482.0
BYDH3_k127_12825532_1 Predicted permease K07089 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008191 310.0
BYDH3_k127_12825532_2 PFAM TonB-dependent Receptor Plug - - - 0.0000000000000000000000000000000000000000000000000000000000000000001653 237.0
BYDH3_k127_12825532_3 PFAM Low molecular weight phosphotyrosine protein phosphatase K03741 - 1.20.4.1 0.000000000000000000000000000000000000000000000000000000000000000004474 232.0
BYDH3_k127_12825532_4 Thioredoxin domain - - - 0.0000000000000000000001958 98.0
BYDH3_k127_12843514_0 Involved in the biosynthesis of porphyrin-containing compound - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002373 372.0
BYDH3_k127_12843514_1 Response regulator of the LytR AlgR family K02477 - - 0.00000000000000000000000000000000000000000000000000000000000009365 214.0
BYDH3_k127_12843514_2 - - - - 0.00000000000000000000000000000000000000000000007008 171.0
BYDH3_k127_12845064_0 Caspase domain - - - 9.116e-201 646.0
BYDH3_k127_12845064_1 Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001127 350.0
BYDH3_k127_12845064_2 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 - 2.5.1.15 0.00000000000000000000000000000007592 125.0
BYDH3_k127_12866750_0 PFAM TonB-dependent Receptor Plug Domain - - - 0.0 1052.0
BYDH3_k127_12866750_1 Pfam:SusD K21572 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000654 503.0
BYDH3_k127_12866750_2 Pregnancy-associated plasma protein-A - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000835 484.0
BYDH3_k127_12866750_3 - - - - 0.00000000000000000000000000000000000000000000000000000001687 206.0
BYDH3_k127_12866750_4 - - - - 0.0000000000002158 74.0
BYDH3_k127_12886833_0 FtsX-like permease family K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001615 567.0
BYDH3_k127_12886833_1 Belongs to the GHMP kinase family. GalK subfamily K00849 - 2.7.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002332 349.0
BYDH3_k127_12886833_2 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K03307 - - 0.0000002753 52.0
BYDH3_k127_12888136_0 Acetyl-CoA dehydrogenase C-terminal like K00248 - 1.3.8.1 1.7e-245 771.0
BYDH3_k127_12888136_1 Domain of Unknown Function (DUF1080) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001947 315.0
BYDH3_k127_12888136_2 PHP domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000006687 233.0
BYDH3_k127_12888136_3 Universal stress protein - - - 0.000000000000000000000000000000000000000000000000000000007624 208.0
BYDH3_k127_12888136_4 Rhodanese Homology Domain - - - 0.000000000000000000000000000000000000000000297 163.0
BYDH3_k127_12888136_5 DinB superfamily - - - 0.000000000000000000000000002299 118.0
BYDH3_k127_12894387_0 Involved in the tonB-independent uptake of proteins - - - 1.338e-279 884.0
BYDH3_k127_12894387_1 PFAM FAD dependent oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004329 311.0
BYDH3_k127_12894387_2 PFAM Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001264 282.0
BYDH3_k127_12894387_3 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.00000000000000000000000000000000000000000000000000000000000000000000001493 248.0
BYDH3_k127_12894387_4 Peptidase family C25 - - - 0.0000000000000000000000000000000000000000000000000000000000000001212 232.0
BYDH3_k127_12929357_0 cell adhesion involved in biofilm formation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000704 512.0
BYDH3_k127_12929357_1 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000008416 214.0
BYDH3_k127_12977644_0 Belongs to the IlvD Edd family - - - 4.422e-294 910.0
BYDH3_k127_12977644_1 Ammonium Transporter K03320 - - 1.533e-195 618.0
BYDH3_k127_12977644_2 Transporter K03281 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001748 548.0
BYDH3_k127_12977644_3 KR domain K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000009412 180.0
BYDH3_k127_12977644_4 transcriptional regulator - - - 0.00000000000000000000000000000000000001356 151.0
BYDH3_k127_12977644_5 - - - - 0.0009509 49.0
BYDH3_k127_12991731_0 PFAM Glycosyl transferase family 2 K00721 - 2.4.1.83 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001805 355.0
BYDH3_k127_12991731_1 D,D-heptose 1,7-bisphosphate phosphatase K03273 - 3.1.3.82,3.1.3.83 0.000000000000000000000000000000000000000000000000000000000001285 213.0
BYDH3_k127_12991731_3 ABC-type transport system involved in lipoprotein release permease component K09808 - - 0.0007427 42.0
BYDH3_k127_13015604_0 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 GO:0003674,GO:0003824,GO:0004479,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006413,GO:0006464,GO:0006518,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0016742,GO:0019538,GO:0019988,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036211,GO:0043043,GO:0043170,GO:0043412,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0046483,GO:0071704,GO:0071951,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.1.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007327 429.0
BYDH3_k127_13015604_1 Belongs to the glycosyl hydrolase 32 family K03332 - 3.2.1.80 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003461 346.0
BYDH3_k127_13015604_2 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002692 342.0
BYDH3_k127_13015604_3 Sulfite exporter TauE/SafE K07090 - - 0.000000000000000000000000000000000000000000000000000000000000000001805 234.0
BYDH3_k127_13015604_4 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis K00287 - 1.5.1.3 0.00000000000000000000000000000000000000000000000000000000002964 210.0
BYDH3_k127_13015604_5 Belongs to the glycosyl hydrolase 32 family K03332 - 3.2.1.80 0.000000000000000000000000000000000000000000000001776 181.0
BYDH3_k127_13029693_0 YidE YbjL duplication domain protein K07085 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003467 516.0
BYDH3_k127_13029693_1 Acetyltransferase (GNAT) domain - - - 0.000000000000000000004666 94.0
BYDH3_k127_13029843_0 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol K00346 - 1.6.5.8 9.664e-212 665.0
BYDH3_k127_13029843_1 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol K00347 - 1.6.5.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004702 539.0
BYDH3_k127_13029843_2 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol K00349 - 1.6.5.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007194 292.0
BYDH3_k127_13029843_3 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 GO:0003674,GO:0003824,GO:0004127,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006573,GO:0006575,GO:0006725,GO:0006732,GO:0006753,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0034654,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046939,GO:0046940,GO:0050145,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.4.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001569 289.0
BYDH3_k127_13029843_4 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol K00350 - 1.6.5.8 0.00000000000000000000000000000000000000000000000000000000000000000000000007899 251.0
BYDH3_k127_13029843_5 - - - - 0.000000000000000000000000000000000000000000000000000000000001193 216.0
BYDH3_k127_13029843_6 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol K00348 - 1.6.5.8 0.0000000000000000000000000000000000000000000000000000000000573 213.0
BYDH3_k127_13029843_7 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol K00350 - 1.6.5.8 0.0000000001042 61.0
BYDH3_k127_13034199_0 peptidyl-prolyl isomerase K03771 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002247 509.0
BYDH3_k127_13034199_1 PFAM ATPase associated with various cellular activities K03924 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001819 291.0
BYDH3_k127_13034199_2 peptidyl-prolyl isomerase K03771 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000001194 209.0
BYDH3_k127_13034199_3 COG NOG23400 non supervised orthologous group - - - 0.000000000000000000000000000000000000004522 157.0
BYDH3_k127_13052049_0 type I phosphodiesterase nucleotide pyrophosphatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003554 551.0
BYDH3_k127_13052049_1 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0070475,GO:0071424,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.199 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007622 400.0
BYDH3_k127_13052049_2 Belongs to the MraZ family K03925 GO:0000976,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031333,GO:0043254,GO:0043565,GO:0044087,GO:0044212,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2000142,GO:2000143,GO:2001141 - 0.0000000000000000000000000000000000000000000000000000000000000000001653 232.0
BYDH3_k127_13052049_3 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.000000000000000000000000000000000000000000000000000000000000000002451 246.0
BYDH3_k127_13052049_4 Cell division protein FtsI penicillin-binding protein 2 K03587 - 3.4.16.4 0.000000000000000000000000000000000000000000002191 167.0
BYDH3_k127_13052049_5 - - - - 0.000000000000000000000000000000000007378 141.0
BYDH3_k127_13059274_0 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001647 556.0
BYDH3_k127_13059274_1 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction K00925 - 2.7.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003571 358.0
BYDH3_k127_13059274_2 belongs to the CobB CobQ family K00625,K13788 - 2.3.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000139 269.0
BYDH3_k127_13059274_3 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction K00925 - 2.7.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000002735 240.0
BYDH3_k127_13074941_0 Two component regulator three Y - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001324 284.0
BYDH3_k127_13074941_1 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000000000000000000000003209 240.0
BYDH3_k127_13074941_2 Domain of unknown function (DU1801) - - - 0.0000000000000000000000000000003459 126.0
BYDH3_k127_13074941_3 - - - - 0.0000000004778 65.0
BYDH3_k127_13081117_0 Protein of unknown function (DUF2723) - - - 1.536e-243 764.0
BYDH3_k127_13081117_1 Protein of unknown function (DUF2723) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002226 514.0
BYDH3_k127_13081117_2 Methionine biosynthesis protein MetW - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002928 338.0
BYDH3_k127_13094314_0 Acetyl-CoA carboxylase carboxyltransferase component (subunits alpha and beta) K01966 - 2.1.3.15,6.4.1.3 1.386e-286 885.0
BYDH3_k127_13094314_1 Ppx GppA phosphatase K01524 - 3.6.1.11,3.6.1.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007772 305.0
BYDH3_k127_13094314_2 MazG nucleotide pyrophosphohydrolase domain - - - 0.0000000000000000000000000000000000000000000000002488 178.0
BYDH3_k127_13094314_3 Belongs to the ComB family K05979 - 3.1.3.71 0.0000000000000000000000000000009749 123.0
BYDH3_k127_13094314_4 membrane - - - 0.000000236 52.0
BYDH3_k127_13102657_0 phosphate transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000264 571.0
BYDH3_k127_13102657_1 3-oxo-5-alpha-steroid 4-dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001106 328.0
BYDH3_k127_13102657_2 Acyl dehydratase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002638 246.0
BYDH3_k127_13102657_3 PFAM Activator of Hsp90 ATPase 1 family protein - - - 0.0000000000000000000000000000000000000000000000000000000003505 204.0
BYDH3_k127_13102657_4 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain K07117 - - 0.0000000000000000000004948 98.0
BYDH3_k127_1366680_0 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001906 369.0
BYDH3_k127_1366680_1 Hydantoinase/oxoprolinase K01469,K01473 - 3.5.2.14,3.5.2.9 0.000000000000000000000000000000000000000000000000005071 186.0
BYDH3_k127_1380581_0 Major Facilitator K16211 - - 1.634e-214 676.0
BYDH3_k127_1380581_1 MFS/sugar transport protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003633 488.0
BYDH3_k127_1380581_2 enterobactin catabolic process K07214 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006655 310.0
BYDH3_k127_1380581_3 Belongs to the glycosyl hydrolase 31 family K01187 - 3.2.1.20 0.00000000000000000000000000000000000000000000000000000000000001998 223.0
BYDH3_k127_1380581_4 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000008817 173.0
BYDH3_k127_1424183_0 TIGRFAM glutamate synthases, NADH NADPH, small subunit K00266 - 1.4.1.13,1.4.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001096 391.0
BYDH3_k127_1424183_1 PFAM Glyoxalase bleomycin resistance protein dioxygenase K08234 - - 0.000000000000000000000000000003805 119.0
BYDH3_k127_1424183_2 ParE toxin of type II toxin-antitoxin system, parDE - - - 0.0000000000000000007872 89.0
BYDH3_k127_1424242_0 Serine aminopeptidase, S33 K06889 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001184 368.0
BYDH3_k127_1424242_1 Serine aminopeptidase, S33 K06889 - - 0.000000000000000000000000000000000000000000000000000008541 198.0
BYDH3_k127_1431480_0 Esterase of the alpha-beta hydrolase superfamily - - - 3.263e-281 882.0
BYDH3_k127_1431480_1 PFAM D-aminoacylase, C-terminal region K06015 - 3.5.1.81 5.228e-202 641.0
BYDH3_k127_1431480_2 potassium uptake protein, TrkH family K03498 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002226 441.0
BYDH3_k127_1431480_3 Belongs to the helicase family. UvrD subfamily - - - 0.000000000000000000000000000000000000000000000000000000005645 207.0
BYDH3_k127_1431480_4 TrkA-N domain K03499 - - 0.00000000000000000000000000000000000000000000000000006862 194.0
BYDH3_k127_1431480_5 Domain of unknown function (DUF4918) - - - 0.00000000000000000000006478 101.0
BYDH3_k127_1431480_6 Predicted membrane protein (DUF2177) - - - 0.000000000000005091 80.0
BYDH3_k127_143731_0 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01950 - 6.3.5.1 8.317e-238 749.0
BYDH3_k127_143731_1 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 - 3.1.26.3 0.00000000000000000000000000000000000000000000000000000556 193.0
BYDH3_k127_143731_2 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins - - - 0.000000000000000000000000000000000000000004485 158.0
BYDH3_k127_1451579_0 COG2366 Protein related to penicillin acylase K01434 - 3.5.1.11 1.586e-285 898.0
BYDH3_k127_1451579_1 Psort location Cytoplasmic, score 8.96 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002343 519.0
BYDH3_k127_1451579_10 metal cluster binding - - - 0.0000000000000000000000000000000000002896 147.0
BYDH3_k127_1451579_11 Methyltransferase domain - - - 0.0000000000000000000000001084 115.0
BYDH3_k127_1451579_12 Protein of unknown function (DUF2892) - - - 0.00000000000000000000003309 100.0
BYDH3_k127_1451579_13 - - - - 0.000000002064 63.0
BYDH3_k127_1451579_2 Transmembrane secretion effector - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001072 512.0
BYDH3_k127_1451579_3 Biotin-lipoyl like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004187 503.0
BYDH3_k127_1451579_4 PFAM Outer membrane efflux protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001411 410.0
BYDH3_k127_1451579_5 PAS domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001018 395.0
BYDH3_k127_1451579_6 Flavin containing amine oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004633 340.0
BYDH3_k127_1451579_7 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005959 264.0
BYDH3_k127_1451579_8 CRP FNR family transcriptional regulator K01420 - - 0.0000000000000000000000000000000000000000000000000000000000000851 219.0
BYDH3_k127_1451579_9 ATPase kinase involved in NAD metabolism - - - 0.000000000000000000000000000000000000000000000000000001168 197.0
BYDH3_k127_1456352_0 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro) K01881 - 6.1.1.15 3.314e-255 793.0
BYDH3_k127_1456352_1 UPF0365 protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006165 480.0
BYDH3_k127_1456352_2 protein kinase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002797 361.0
BYDH3_k127_1456352_3 NfeD-like C-terminal, partner-binding - - - 0.00000000000000000000000000000000000000000001509 166.0
BYDH3_k127_1464568_0 4Fe-4S dicluster domain - - - 6.448e-253 792.0
BYDH3_k127_1464568_1 COGs COG0058 Glucan phosphorylase K00688,K00691 - 2.4.1.1,2.4.1.8 3.043e-226 713.0
BYDH3_k127_1464568_2 Pyridine nucleotide-disulphide oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009162 610.0
BYDH3_k127_1464568_3 Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family K07402 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001771 433.0
BYDH3_k127_1464568_4 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002162 264.0
BYDH3_k127_1464568_5 Cytochrome C oxidase, cbb3-type, subunit III K00405 - - 0.000000000000000000000000000000000001706 142.0
BYDH3_k127_1464568_6 glycosyl transferase family 2 - - - 0.0000000000000000000000002473 107.0
BYDH3_k127_1464568_7 PFAM Glycosyl transferase family 2 - - - 0.00000000000000005955 82.0
BYDH3_k127_1464568_8 Regulator of microtubule dynamics - GO:0000922,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0005740,GO:0005741,GO:0005819,GO:0005856,GO:0006873,GO:0006874,GO:0006875,GO:0008150,GO:0009987,GO:0015630,GO:0016020,GO:0019725,GO:0019867,GO:0030003,GO:0031090,GO:0031966,GO:0031967,GO:0031968,GO:0031975,GO:0042592,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0044422,GO:0044424,GO:0044429,GO:0044430,GO:0044444,GO:0044446,GO:0044464,GO:0048878,GO:0050801,GO:0055065,GO:0055074,GO:0055080,GO:0055082,GO:0065007,GO:0065008,GO:0072503,GO:0072507,GO:0098588,GO:0098771,GO:0098805 - 0.000003622 57.0
BYDH3_k127_1474929_0 MacB-like periplasmic core domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000643 527.0
BYDH3_k127_1474929_1 MacB-like periplasmic core domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008868 428.0
BYDH3_k127_1474929_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001932 421.0
BYDH3_k127_1474929_3 Phospholipase D. Active site motifs. K06131 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000289 398.0
BYDH3_k127_1474929_4 ATPases associated with a variety of cellular activities K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006255 383.0
BYDH3_k127_1474929_5 Outer membrane lipoprotein-sorting protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001589 359.0
BYDH3_k127_1474929_6 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001037 350.0
BYDH3_k127_1474929_7 LexA-binding, inner membrane-associated putative hydrolase K07038 - - 0.0000000000000000000000000000000000000000000000000001235 190.0
BYDH3_k127_1474929_8 Uncharacterized conserved protein (DUF2267) - - - 0.000000000000000000000000000000000008032 141.0
BYDH3_k127_1474929_9 PFAM Sigma 54 modulation protein S30EA ribosomal protein K05808 - - 0.000000000006631 68.0
BYDH3_k127_1478282_0 ABC transporter transmembrane region K18890 - - 6.113e-287 890.0
BYDH3_k127_1478282_1 Belongs to the thiolase family K00626,K07823 - 2.3.1.174,2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001744 582.0
BYDH3_k127_1478282_2 COG1228 Imidazolonepropionase and related - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006681 547.0
BYDH3_k127_1478282_3 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002102 297.0
BYDH3_k127_1478282_5 Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides K11065 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000000000318 218.0
BYDH3_k127_1478282_6 Domain of unknown function (DUF4293) - - - 0.0000000000000000000000007309 109.0
BYDH3_k127_1484515_0 Pectinacetylesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009415 449.0
BYDH3_k127_1484515_1 PFAM aminotransferase, class I - - - 0.0000000000000000000000000000000000000000000000000000000000007001 218.0
BYDH3_k127_1484515_2 Ketosteroid isomerase-related protein - - - 0.00000000000000000000000000000000000000000003056 166.0
BYDH3_k127_1484515_3 Aminotransferase class I and II - - - 0.00000000000000000000000000000001427 130.0
BYDH3_k127_1484515_4 - - - - 0.0000000000008923 68.0
BYDH3_k127_1484515_5 - - - - 0.000000003744 63.0
BYDH3_k127_1484515_6 Domain of unknown function (DUF3601) - - - 0.00001893 50.0
BYDH3_k127_1506996_0 TAP-like protein - - - 0.0000000000000000000000000000000000008119 143.0
BYDH3_k127_1506996_1 - - - - 0.0000000000000000000000000000000001367 136.0
BYDH3_k127_1506996_2 YceI-like domain - - - 0.00000000000000000000000000000003436 132.0
BYDH3_k127_15205_0 SMART transcription factor jumonji - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002254 295.0
BYDH3_k127_15205_1 - - - - 0.00000000000000000000000000000000000000000000000002533 186.0
BYDH3_k127_15205_2 FAD dependent oxidoreductase - - - 0.0000000000000008546 77.0
BYDH3_k127_15205_3 - - - - 0.0002947 52.0
BYDH3_k127_1540993_0 Branched-chain amino acid aminotransferase K00826 - 2.6.1.42 0.000000000000000000000000000000000000000000000000000000001508 203.0
BYDH3_k127_1540993_1 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.0000000001717 63.0
BYDH3_k127_162998_0 ASPIC and UnbV - - - 0.0 1103.0
BYDH3_k127_162998_1 TPR repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004034 567.0
BYDH3_k127_162998_2 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins - - - 0.000000000000000000000000000000000000001835 161.0
BYDH3_k127_1674411_0 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001633 297.0
BYDH3_k127_1674411_1 PFAM Glyoxalase bleomycin resistance protein dioxygenase - - - 0.0000000000000000000000000000000000000000000000000000002467 196.0
BYDH3_k127_1674411_2 TPM domain - - - 0.000000000000000000000000000000000000002914 155.0
BYDH3_k127_1674411_3 - - - - 0.000000000000000000000000000007834 125.0
BYDH3_k127_1779063_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.0 1028.0
BYDH3_k127_1779063_1 Protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009301 481.0
BYDH3_k127_1779063_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008568 480.0
BYDH3_k127_1855760_0 GDSL family lipolytic protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004361 479.0
BYDH3_k127_1855760_1 Methylenetetrahydrofolate reductase K00297 - 1.5.1.20 0.000000000000000000000000000000000000000000000000000000000000000000008215 235.0
BYDH3_k127_1855760_2 PFAM TonB-dependent Receptor Plug - - - 0.00000000000000000000000000000000000000000000000002462 179.0
BYDH3_k127_1893989_0 belongs to the aldehyde dehydrogenase family - - - 4.352e-297 917.0
BYDH3_k127_1893989_1 Protein of unknown function (DUF4197) - - - 0.000000000000000001626 85.0
BYDH3_k127_190285_0 AsmA-like C-terminal region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001618 387.0
BYDH3_k127_190285_1 Caspase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001915 332.0
BYDH3_k127_190285_2 glyoxalase - - - 0.000000000000000000000000000000000000000000000000000007027 197.0
BYDH3_k127_190285_3 Domain of unknown function (DU1801) - - - 0.0000000000000000000000000000000000000000000004494 169.0
BYDH3_k127_190285_4 Protein of unknown function (DUF4199) - - - 0.0000000000000000000000000000000000000000002835 164.0
BYDH3_k127_190285_5 PFAM Bacterial regulatory proteins, luxR family - - - 0.0000000000000000000000000000000000000354 147.0
BYDH3_k127_1950693_0 Beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002398 466.0
BYDH3_k127_1950693_1 Transglutaminase/protease-like homologues - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001961 303.0
BYDH3_k127_1950693_2 Specifically methylates the N7 position of a guanine in 16S rRNA K03501 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036265,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070043,GO:0070475,GO:0070476,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.170 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002484 299.0
BYDH3_k127_1950693_3 A predicted alpha-helical domain with a conserved ER motif. - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000195 260.0
BYDH3_k127_1950693_4 Circularly permuted ATP-grasp type 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000002439 234.0
BYDH3_k127_1950693_5 PFAM Collagen triple helix repeat (20 copies) - - - 0.0000003023 62.0
BYDH3_k127_1955170_0 Catalyzes the interconversion between ADP-D-glycero- beta-D-manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose K03274 - 5.1.3.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001134 519.0
BYDH3_k127_1955170_1 SusD family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000365 287.0
BYDH3_k127_1955170_2 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 - 2.4.1.182 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001322 279.0
BYDH3_k127_1955170_3 TIGRFAM 6-pyruvoyl tetrahydropterin synthase QueD family protein K01737 - 4.1.2.50,4.2.3.12 0.000000000000000000000000000000000000000000000000000000000000000000000002786 246.0
BYDH3_k127_20824_0 PFAM Fatty acid hydroxylase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001779 490.0
BYDH3_k127_20824_1 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009464 481.0
BYDH3_k127_20824_10 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain - - - 0.0000000000000000000000000000000000000000000000756 173.0
BYDH3_k127_20824_11 - - - - 0.0000000000000000000000000000000000000000000408 168.0
BYDH3_k127_20824_12 COGs COG0737 5'-nucleotidase 2' 3'-cyclic phosphodiesterase and related esterase K01081,K11751 - 3.1.3.5,3.6.1.45 0.00000000000000000000000000000000000004637 145.0
BYDH3_k127_20824_13 COG0607 Rhodanese-related sulfurtransferase - - - 0.00000000000000000000000000000004382 129.0
BYDH3_k127_20824_2 Cytochrome C oxidase, cbb3-type, subunit III K19713 - 1.8.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003133 432.0
BYDH3_k127_20824_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002223 333.0
BYDH3_k127_20824_4 membrane transporter protein K07090 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001406 314.0
BYDH3_k127_20824_5 Alkylated DNA repair protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002839 306.0
BYDH3_k127_20824_6 PFAM YeeE YedE family (DUF395) K07112 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003479 291.0
BYDH3_k127_20824_7 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006362 293.0
BYDH3_k127_20824_8 PFAM YeeE YedE family (DUF395) K07112 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001309 251.0
BYDH3_k127_20824_9 Rhodanese Homology Domain - - - 0.00000000000000000000000000000000000000000000001908 173.0
BYDH3_k127_2089931_0 Signal transduction histidine kinase K07636 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006823 451.0
BYDH3_k127_2089931_1 Transcriptional regulatory protein, C terminal - - - 0.00000000000000000000000000000000000000000000000000000000000004359 218.0
BYDH3_k127_2089931_2 Protein of unknown function (DUF1573) - - - 0.00000000000000000000000000000005347 129.0
BYDH3_k127_2089931_3 TonB dependent receptor - - - 0.00000000004024 64.0
BYDH3_k127_2096420_0 B12 binding domain K00548 - 2.1.1.13 0.0 1319.0
BYDH3_k127_2096420_1 Methylenetetrahydrofolate reductase K00297 - 1.5.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004283 509.0
BYDH3_k127_2096420_2 Homocysteine S-methyltransferase K00548 - 2.1.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002957 374.0
BYDH3_k127_2096420_3 23S rRNA-intervening sequence protein - - - 0.000000000000000000000000000000007807 129.0
BYDH3_k127_2096420_4 GDSL family lipolytic protein - - - 0.0000000000000000000000000002549 119.0
BYDH3_k127_2126691_0 CHAT domain - - - 0.0 1430.0
BYDH3_k127_2126691_1 mercury ion transmembrane transporter activity K01533,K17686 GO:0003674,GO:0003824,GO:0005215,GO:0005388,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0008150,GO:0008324,GO:0015075,GO:0015085,GO:0015318,GO:0015399,GO:0015405,GO:0015662,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0030001,GO:0031224,GO:0031226,GO:0034220,GO:0042623,GO:0042625,GO:0042626,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043492,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0070588,GO:0070838,GO:0071944,GO:0072511,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0099131,GO:0099132 3.6.3.4,3.6.3.54 3.296e-231 740.0
BYDH3_k127_2126691_10 Transcription elongation factor - - - 0.000000000000000000000000000000000002812 142.0
BYDH3_k127_2126691_11 TIGRFAM cytochrome oxidase maturation protein, cbb3-type - - - 0.0000000001279 63.0
BYDH3_k127_2126691_2 Belongs to the MenA family. Type 1 subfamily K02548 - 2.5.1.74 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001271 365.0
BYDH3_k127_2126691_3 Methylmalonyl-CoA mutase K01847 - 5.4.99.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000213 349.0
BYDH3_k127_2126691_4 response regulator, receiver K02477 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001191 336.0
BYDH3_k127_2126691_5 Transcriptional regulator, Crp Fnr family K01420 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001715 274.0
BYDH3_k127_2126691_6 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000903 260.0
BYDH3_k127_2126691_7 Universal stress protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000691 240.0
BYDH3_k127_2126691_8 DinB superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000002596 223.0
BYDH3_k127_2126691_9 Protein of unknown function (DUF456) K09793 - - 0.00000000000000000000000000000000000000000001576 166.0
BYDH3_k127_2134710_0 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775,K01929 - 5.1.1.1,6.3.2.10 3.651e-275 868.0
BYDH3_k127_2134710_1 transporter of a GTP-driven Fe(2 ) uptake system K04759 - - 8.401e-272 852.0
BYDH3_k127_2134710_10 PFAM Integral membrane protein TerC K05794 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001636 416.0
BYDH3_k127_2134710_11 Belongs to the NadC ModD family K00767 - 2.4.2.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001035 394.0
BYDH3_k127_2134710_12 1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase K01814 - 5.3.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001427 370.0
BYDH3_k127_2134710_13 PDZ DHR GLGF domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001006 365.0
BYDH3_k127_2134710_14 UbiA prenyltransferase family K02548 - 2.5.1.74 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009565 346.0
BYDH3_k127_2134710_15 ligase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003948 342.0
BYDH3_k127_2134710_17 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000000833 249.0
BYDH3_k127_2134710_18 Methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000165 243.0
BYDH3_k127_2134710_19 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000487 226.0
BYDH3_k127_2134710_2 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 1.57e-257 801.0
BYDH3_k127_2134710_20 Belongs to the LOG family K06966 - 3.2.2.10 0.0000000000000000000000000000000000000000000000000000000001779 208.0
BYDH3_k127_2134710_21 Protein of unknown function (DUF2911) - - - 0.0000000000000000000000000000000000000000000000000000000002837 207.0
BYDH3_k127_2134710_22 monooxygenase activity - - - 0.0000000000000000000000000000000000000000000000000001137 190.0
BYDH3_k127_2134710_23 LysE type translocator - - - 0.0000000000000000000000000000000000000000000000000001406 192.0
BYDH3_k127_2134710_24 Belongs to the Fur family K03711 - - 0.0000000000000000000000000000000000000000000000000006909 186.0
BYDH3_k127_2134710_25 DinB family - - - 0.00000000000000000000000000000000000000000000003856 174.0
BYDH3_k127_2134710_26 Modulates RecA activity K03565 - - 0.000000000000000000000000000000000000000000165 164.0
BYDH3_k127_2134710_27 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.0000000000000000000000000000000000000000002363 160.0
BYDH3_k127_2134710_28 TIGRFAM export-related chaperone CsaA K06878 - - 0.0000000000000000000000000000000000000000638 155.0
BYDH3_k127_2134710_29 Domain of unknown function (DUF4783) - - - 0.000000000000000000000000000000000005524 140.0
BYDH3_k127_2134710_3 ABC-type multidrug transport system ATPase and permease K11085 - - 1.327e-239 754.0
BYDH3_k127_2134710_31 response regulator - - - 0.000000000000000000000000001352 117.0
BYDH3_k127_2134710_32 - - - - 0.0000000000000000000000008289 111.0
BYDH3_k127_2134710_33 FeoA K04758 - - 0.000000000000000000000002494 103.0
BYDH3_k127_2134710_34 Peptide chain release factor K02835 GO:0003674,GO:0003676,GO:0003723,GO:0003747,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0006996,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009507,GO:0009536,GO:0009657,GO:0009658,GO:0009668,GO:0009987,GO:0010027,GO:0010467,GO:0016043,GO:0019538,GO:0022411,GO:0032544,GO:0032984,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0061024,GO:0071704,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000001519 77.0
BYDH3_k127_2134710_35 LETM1-like protein - - - 0.00000000000002056 76.0
BYDH3_k127_2134710_36 - - - - 0.00000000002488 66.0
BYDH3_k127_2134710_4 TonB-dependent Receptor Plug K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007333 599.0
BYDH3_k127_2134710_5 Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR) K01589 - 6.3.4.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009607 527.0
BYDH3_k127_2134710_6 FAD binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000785 458.0
BYDH3_k127_2134710_7 Sulfatase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009092 448.0
BYDH3_k127_2134710_8 Xylose isomerase-like TIM barrel - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002222 429.0
BYDH3_k127_2134710_9 PFAM chalcone and stilbene - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009861 428.0
BYDH3_k127_2147601_0 Belongs to the peptidase S41A family K03797 - 3.4.21.102 1.134e-222 702.0
BYDH3_k127_2147601_1 Homogentisate 12-dioxygenase K00451 - 1.13.11.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004099 326.0
BYDH3_k127_2147601_2 Di-iron-containing protein involved in the repair of iron-sulfur clusters K07322 - - 0.00000000000000000000000000000000000000000000000000000000000000001414 229.0
BYDH3_k127_2147601_3 Homogentisate 12-dioxygenase K00451 - 1.13.11.5 0.0000000000000000000000000000000000000000000000000000000000000001699 221.0
BYDH3_k127_2149289_0 alpha/beta hydrolase fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005904 479.0
BYDH3_k127_2149289_1 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008648 298.0
BYDH3_k127_2149289_2 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K07303 - 1.3.99.16 0.00000000000000000000000000000000000000000000000000000000000000000002707 234.0
BYDH3_k127_2149289_3 PFAM Type III restriction enzyme, res subunit - - - 0.0000000000000001407 79.0
BYDH3_k127_2158394_0 Fumarase C C-terminus K01744 - 4.3.1.1 4.595e-289 893.0
BYDH3_k127_2158394_1 Phosphate-selective porin O and P - - - 4.983e-229 712.0
BYDH3_k127_2158394_2 Sodium/hydrogen exchanger family - - - 0.0000000000000000000000000000000000000000001563 163.0
BYDH3_k127_221384_0 PFAM Cysteine-rich domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006019 456.0
BYDH3_k127_221384_1 Belongs to the ompA family K03640 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001545 310.0
BYDH3_k127_221384_2 4Fe-4S dicluster domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000009742 287.0
BYDH3_k127_221384_3 - - - - 0.000000000000000000000000000000000000007852 150.0
BYDH3_k127_2231312_0 phytoene K10027 - 1.3.99.26,1.3.99.28,1.3.99.29,1.3.99.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002434 507.0
BYDH3_k127_2231312_1 - - - - 0.00000000000000000000000000000000004412 138.0
BYDH3_k127_2272823_0 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 2.258e-311 973.0
BYDH3_k127_2272823_1 Endoribonuclease that initiates mRNA decay K18682 - - 3.937e-255 795.0
BYDH3_k127_2272823_10 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.0000000000000000000000000000000007746 132.0
BYDH3_k127_2272823_11 - - - - 0.00000000000000000000000000001574 121.0
BYDH3_k127_2272823_12 - - - - 0.0000000000000000000000000001057 124.0
BYDH3_k127_2272823_14 Binds directly to 16S ribosomal RNA K02968 - - 0.000000000000000000000000008788 112.0
BYDH3_k127_2272823_15 Domain of unknown function (DUF4198) - - - 0.000000000000000000000009336 106.0
BYDH3_k127_2272823_16 - - - - 0.000000000000000000000122 100.0
BYDH3_k127_2272823_17 Outer membrane protein beta-barrel domain - - - 0.000000000000000004195 91.0
BYDH3_k127_2272823_2 Alpha-L-fucosidase K01206 - 3.2.1.51 1.028e-212 667.0
BYDH3_k127_2272823_3 Belongs to the peptidase M24B family K01262 - 3.4.11.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006597 582.0
BYDH3_k127_2272823_4 S1 P1 nuclease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003874 396.0
BYDH3_k127_2272823_5 COGs COG1680 Beta-lactamase class C and other penicillin binding protein K01467 - 3.5.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003975 353.0
BYDH3_k127_2272823_6 Belongs to the UPF0758 family K03630 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008976 309.0
BYDH3_k127_2272823_7 - K13652 - - 0.000000000000000000000000000000000000000000000000000000000006009 220.0
BYDH3_k127_2272823_8 PFAM TonB-dependent Receptor Plug - - - 0.000000000000000000000000000000000000000000000000000001262 200.0
BYDH3_k127_2272823_9 Protein of unknown function (DUF1684) K09164 - - 0.000000000000000000000000000000000000000000000000000001913 197.0
BYDH3_k127_2298152_0 Bacterial lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005063 300.0
BYDH3_k127_2298152_1 CarboxypepD_reg-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003466 250.0
BYDH3_k127_2298152_2 peptidase, M20 K01295 - 3.4.17.11 0.000000000000000000000000000000000000000000000000000000000000000000000009176 248.0
BYDH3_k127_2298152_3 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E K07025 - - 0.000000000000000000000000000000000000000000000000000000000000000978 226.0
BYDH3_k127_2298152_4 PFAM Phosphoglycerate mutase K08296 - - 0.00000000000000000000000000000000000000000000000000001347 193.0
BYDH3_k127_2298152_5 arsR family K03892 - - 0.000000000000000000000000000000000000000000001159 168.0
BYDH3_k127_2298152_6 Endonuclease containing a URI domain K07461 - - 0.00000000000000000002106 94.0
BYDH3_k127_2298152_7 TIGRFAM delta-1-pyrroline-5-carboxylate dehydrogenase, group 1 K00294,K13821 - 1.2.1.88,1.5.5.2 0.0000003934 51.0
BYDH3_k127_2307432_0 SPTR Membrane-bound dehydrogenase domain protein - - - 0.0 1155.0
BYDH3_k127_2307432_1 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004431 496.0
BYDH3_k127_2307432_10 CAAX protease self-immunity - - - 0.00000000000000000000000000000000000000000006128 170.0
BYDH3_k127_2307432_11 Pkd domain containing protein - - - 0.000000000000000000000000000000000000000006593 164.0
BYDH3_k127_2307432_12 MoaF C-terminal domain - - - 0.0000000000000000000000000000000000000002171 153.0
BYDH3_k127_2307432_14 N-acetylglucosaminylinositol deacetylase activity - - - 0.000000000000000000000000000000000000001756 158.0
BYDH3_k127_2307432_15 manually curated - - - 0.00000000000000000000000000000003483 126.0
BYDH3_k127_2307432_16 Transposase IS200 like - - - 0.000000000000000000000000000001403 122.0
BYDH3_k127_2307432_17 YCII-related domain - - - 0.0002061 44.0
BYDH3_k127_2307432_2 Polyphosphate kinase K22468 - 2.7.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001621 494.0
BYDH3_k127_2307432_3 metal ion transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001431 492.0
BYDH3_k127_2307432_4 OST-HTH/LOTUS domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000469 397.0
BYDH3_k127_2307432_5 PFAM 3-carboxy-cis,cis-muconate lactonizing enzyme K07404 - 3.1.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005775 401.0
BYDH3_k127_2307432_6 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002891 390.0
BYDH3_k127_2307432_7 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000001283 240.0
BYDH3_k127_2307432_8 - - - - 0.0000000000000000000000000000000000000000000000000000000002895 208.0
BYDH3_k127_2307432_9 ankyrin repeats - - - 0.000000000000000000000000000000000000000000006497 168.0
BYDH3_k127_2316577_0 Outer membrane protein beta-barrel domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001382 321.0
BYDH3_k127_2316577_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000201 249.0
BYDH3_k127_2316577_3 - K07275 - - 0.000000000000000000000000000000000000000000000000000000001026 207.0
BYDH3_k127_2316577_4 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides - - - 0.00000000000000000000000000344 117.0
BYDH3_k127_2356168_0 Belongs to the Glu Leu Phe Val dehydrogenases family K00261 - 1.4.1.3 8.616e-233 725.0
BYDH3_k127_2356168_1 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000329 562.0
BYDH3_k127_2356168_2 Belongs to the CDS family K00981 - 2.7.7.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005014 364.0
BYDH3_k127_2356168_3 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003297 304.0
BYDH3_k127_2356168_4 PFAM EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000008356 298.0
BYDH3_k127_2356168_5 PFAM CAAX amino terminal protease family K07052 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001811 279.0
BYDH3_k127_2356168_6 PFAM Scaffold protein Nfu NifU N terminal - - - 0.0000000000000000000000000000000007385 132.0
BYDH3_k127_2356168_7 fatty acid desaturase K00508 - 1.14.19.3 0.00000000000005947 74.0
BYDH3_k127_2389409_0 TonB-dependent receptor - - - 5.978e-201 653.0
BYDH3_k127_2389409_1 Major Facilitator K16211 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001294 385.0
BYDH3_k127_2389422_0 ASPIC and UnbV - - - 0.0 1389.0
BYDH3_k127_2389422_1 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella - - - 0.0 1065.0
BYDH3_k127_2389422_2 ASPIC and UnbV - - - 1.157e-314 998.0
BYDH3_k127_2389422_3 TonB dependent receptor - - - 1.574e-313 986.0
BYDH3_k127_2389422_4 SPTR Phosphoesterase, PA-phosphatase related - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001692 549.0
BYDH3_k127_2389422_5 SusD family K21572 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004326 482.0
BYDH3_k127_2389422_6 Major Facilitator K16211 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009462 386.0
BYDH3_k127_2389422_7 - - - - 0.000000000000000000000000000000008297 135.0
BYDH3_k127_2395187_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003948 557.0
BYDH3_k127_2395187_1 GMC oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000001286 199.0
BYDH3_k127_2395187_2 DoxX - - - 0.00000000000000000000000000000000000000000000000202 176.0
BYDH3_k127_2410460_0 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001851 516.0
BYDH3_k127_2410460_1 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000002763 262.0
BYDH3_k127_2410460_2 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.0000000000000000000000000000000000000000000000000000000000000000008071 231.0
BYDH3_k127_2410460_3 Belongs to the purine pyrimidine phosphoribosyltransferase family K00760 - 2.4.2.8 0.000000000000000000000000000000000000000000000000000000000001011 214.0
BYDH3_k127_2410460_4 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 GO:0000166,GO:0000774,GO:0003674,GO:0005488,GO:0005515,GO:0008150,GO:0017076,GO:0030234,GO:0030554,GO:0036094,GO:0050790,GO:0051082,GO:0060589,GO:0060590,GO:0065007,GO:0065009,GO:0097159,GO:0098772,GO:1901265,GO:1901363 - 0.00000000000000000000000000000000000000000000000000005575 192.0
BYDH3_k127_2410460_5 23S rRNA-intervening sequence protein - - - 0.00000000000000000000000000000000000000000003746 164.0
BYDH3_k127_2410460_6 - - - - 0.0000000000415 64.0
BYDH3_k127_2432729_0 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140101,GO:0140102,GO:1901360 2.1.1.192 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001883 537.0
BYDH3_k127_2432729_1 mandelate racemase muconate lactonizing - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008747 458.0
BYDH3_k127_2432729_2 Beta-lactamase enzyme family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009927 444.0
BYDH3_k127_2432729_3 Domain of unknown function (DUF1611_N) Rossmann-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009242 430.0
BYDH3_k127_2432729_4 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001332 327.0
BYDH3_k127_2432729_5 abc transporter (atp-binding protein) K02013 - 3.6.3.34 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001248 316.0
BYDH3_k127_2432729_6 VIT family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001429 280.0
BYDH3_k127_2432729_7 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.000000000000000000000000003498 111.0
BYDH3_k127_2432729_8 TonB-linked outer membrane protein, SusC RagA family - - - 0.0000000006164 68.0
BYDH3_k127_244316_0 C-terminal domain of CHU protein family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000219 589.0
BYDH3_k127_244316_1 TIGRFAM Bacteroidetes-specific - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001281 274.0
BYDH3_k127_244316_2 TIGRFAM Bacteroidetes-specific - - - 0.00000000000000000000000000000000000000000000000000000000001539 207.0
BYDH3_k127_244316_3 23S rRNA-intervening sequence protein - - - 0.00000000000000000000000000007684 117.0
BYDH3_k127_2445244_0 Tetratricopeptide repeat - - - 6.57e-322 1015.0
BYDH3_k127_2445244_1 TIGRFAM DNA polymerase III, delta subunit K02340 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004386 388.0
BYDH3_k127_2445244_2 Sigma-54 interaction domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002735 301.0
BYDH3_k127_2445244_3 Psort location OuterMembrane, score - - - 0.00000000000000000000000000000000000000000000000000008446 196.0
BYDH3_k127_2445244_4 Rhomboid family - - - 0.0000000000000000000000000000000000000000000000000001073 192.0
BYDH3_k127_247221_0 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005817 586.0
BYDH3_k127_247221_1 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003933 548.0
BYDH3_k127_247221_2 OstA-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001366 463.0
BYDH3_k127_247221_3 HlyD membrane-fusion protein of T1SS - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000276 458.0
BYDH3_k127_247221_4 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000124 368.0
BYDH3_k127_247221_5 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009807 375.0
BYDH3_k127_247221_6 PFAM Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003816 344.0
BYDH3_k127_247221_7 ECF sigma factor K03088 - - 0.000000000000000000000000000000000000000000000000000000000004296 214.0
BYDH3_k127_247221_8 - - - - 0.000000000000000000000002662 106.0
BYDH3_k127_247221_9 - - - - 0.000000000000002894 85.0
BYDH3_k127_2485586_0 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001793 439.0
BYDH3_k127_2485586_1 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0016740,GO:0016741,GO:0032259,GO:0044424,GO:0044444,GO:0044464 2.1.1.297 0.00000000000000000000000000000000000000000000000000000000000000001271 234.0
BYDH3_k127_2485586_2 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000000000000000000000000104 186.0
BYDH3_k127_2485586_3 - - - - 0.00000000000000001264 88.0
BYDH3_k127_2512122_0 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001351 390.0
BYDH3_k127_2512122_1 MacB-like periplasmic core domain - - - 0.00000000000000000000000000000000000000000000000000000000000004361 222.0
BYDH3_k127_2512122_2 MacB-like periplasmic core domain - - - 0.00000000000000000000000000000000000000000000000004248 187.0
BYDH3_k127_2512122_3 Transcriptional regulator PadR-like family - - - 0.0000000000000000000000000000000000000000000001213 170.0
BYDH3_k127_2543203_0 TIGRFAM Aspartate kinase K12524 - 1.1.1.3,2.7.2.4 8.443e-309 966.0
BYDH3_k127_2543203_1 hydrogen-translocating pyrophosphatase activity K15987 - 3.6.1.1 2.535e-282 878.0
BYDH3_k127_2543203_2 Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate K00872 - 2.7.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002878 370.0
BYDH3_k127_2543203_3 PFAM thioesterase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001103 254.0
BYDH3_k127_2556158_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0 1065.0
BYDH3_k127_2556158_1 TrkA-N domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000225 356.0
BYDH3_k127_2556158_10 Cytochrome c - - - 0.00000000000000000000000003067 111.0
BYDH3_k127_2556158_11 tRNA_anti-like - - - 0.0000000000000000000000002371 109.0
BYDH3_k127_2556158_2 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008945 342.0
BYDH3_k127_2556158_3 Crp-like helix-turn-helix domain K10914 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004185 310.0
BYDH3_k127_2556158_4 beta barrel domain K07140 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000744 286.0
BYDH3_k127_2556158_5 protein SCO1 SenC PrrC involved in biogenesis of respiratory and photosynthetic systems K07152 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007731 268.0
BYDH3_k127_2556158_6 Cytochrome c - - - 0.000000000000000000000000000000000000000000000000000000007981 206.0
BYDH3_k127_2556158_7 PFAM Lipid polyisoprenoid-binding, YceI-like - - - 0.0000000000000000000000000000000000000000000000008168 180.0
BYDH3_k127_2556158_8 Cytochrome c, class I - - - 0.000000000000000000000000000000000000004729 150.0
BYDH3_k127_2556158_9 protein conserved in bacteria K09931 - - 0.000000000000000000000000000007873 120.0
BYDH3_k127_2593208_0 long-chain fatty acid transport protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002088 464.0
BYDH3_k127_2593208_1 PFAM Peptidase M16 inactive domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002001 306.0
BYDH3_k127_2593208_2 Peptidase family C25 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002172 290.0
BYDH3_k127_2633235_0 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001617 584.0
BYDH3_k127_2633235_1 two component, sigma54 specific, transcriptional regulator, Fis family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000131 408.0
BYDH3_k127_2633235_2 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001427 254.0
BYDH3_k127_2634621_0 PFAM Phosphorylase superfamily K00757 - 2.4.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008127 323.0
BYDH3_k127_2634621_1 sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003083 278.0
BYDH3_k127_2634621_2 - - - - 0.000000000000000000000000000000000003266 145.0
BYDH3_k127_2634621_3 PFAM Phosphorylase superfamily K00757 - 2.4.2.3 0.0000000000000000000001629 97.0
BYDH3_k127_2677754_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 3.65e-308 982.0
BYDH3_k127_2677754_1 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006365 465.0
BYDH3_k127_2677754_2 COG0642 Signal transduction histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001178 476.0
BYDH3_k127_2677754_3 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000464 136.0
BYDH3_k127_2678922_0 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 6.364e-248 772.0
BYDH3_k127_2678922_1 PFAM Stage II sporulation protein E (SpoIIE) - - - 1.485e-245 776.0
BYDH3_k127_2678922_2 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 5.352e-221 693.0
BYDH3_k127_2678922_3 peptidyl-prolyl isomerase K03771 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007874 438.0
BYDH3_k127_2678922_4 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.000000000000000000000000000000000000000000000000000000000000000000001649 242.0
BYDH3_k127_2678922_5 Belongs to the anti-sigma-factor antagonist family K04749 - - 0.00000000000000000000000000000000003383 137.0
BYDH3_k127_2678922_6 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K04757 - 2.7.11.1 0.00000000000000000000000000000004947 130.0
BYDH3_k127_2678922_7 Concanavalin A-like lectin/glucanases superfamily - - - 0.000000000000000000000000009597 128.0
BYDH3_k127_2678922_8 Protein conserved in bacteria - - - 0.00001806 58.0
BYDH3_k127_2741032_0 Peptidase dimerisation domain - - - 2.514e-201 638.0
BYDH3_k127_2741032_1 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002206 576.0
BYDH3_k127_2741032_2 Arylesterase - - - 0.000000000000000000000000000000000000000000004229 168.0
BYDH3_k127_2741032_3 Domain of unknown function (DUF3817) - - - 0.000000000000000000000000004452 113.0
BYDH3_k127_2741032_4 Tfp pilus assembly protein FimV - - - 0.000000000000000002387 93.0
BYDH3_k127_2741032_5 - - - - 0.00000000000002053 74.0
BYDH3_k127_2745923_0 Carbon-nitrogen hydrolase K01501 - 3.5.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003314 392.0
BYDH3_k127_2745923_1 Protein of unknown function (DUF2911) - - - 0.00000000000000000000000000000000000000000000000000000000008357 211.0
BYDH3_k127_2745923_2 PFAM Amidohydrolase 2 - - - 0.0000000000000000008615 86.0
BYDH3_k127_2745923_3 - - - - 0.000000005418 61.0
BYDH3_k127_2745923_4 Peptidase family M28 - - - 0.00005684 46.0
BYDH3_k127_2746670_0 TonB dependent receptor K16091 - - 1.006e-276 869.0
BYDH3_k127_2746670_1 TonB dependent receptor K16089 - - 1.488e-217 696.0
BYDH3_k127_2746670_2 Bacterial protein of unknown function (DUF853) K06915 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004832 281.0
BYDH3_k127_2746670_3 AraC family transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003863 254.0
BYDH3_k127_2746670_4 HmuY protein - - - 0.0000000000000000006188 91.0
BYDH3_k127_2773754_0 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00819 - 2.6.1.13 7.306e-205 643.0
BYDH3_k127_2773754_1 ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity K06048 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004033 581.0
BYDH3_k127_2773754_2 Glutathione synthase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003807 501.0
BYDH3_k127_2773754_3 Putative esterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001371 335.0
BYDH3_k127_2773754_4 Putative esterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000009251 277.0
BYDH3_k127_2773754_5 TIGRFAM HAD-superfamily hydrolase, subfamily IA, variant 3 K01560,K07025 - 3.8.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008475 272.0
BYDH3_k127_2773754_6 alpha/beta hydrolase fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002013 249.0
BYDH3_k127_2773754_7 Required for chromosome condensation and partitioning - - - 0.0000000000000000000000000000000000000000000000000000000000000000009987 244.0
BYDH3_k127_2773754_8 GMP synthase-glutamine amidotransferase - - - 0.0000000000000000000000000000000000000000000000000000000000001408 216.0
BYDH3_k127_2783102_0 FtsX-like permease family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003671 548.0
BYDH3_k127_2783102_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000007945 253.0
BYDH3_k127_2783102_2 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000000000000002811 198.0
BYDH3_k127_2783102_3 arginyltransferase activity K21420 - 2.3.2.29 0.0000000000000000000000000000000000000000005658 166.0
BYDH3_k127_2783102_4 Domain of unknown function (DUF4345) - - - 0.000000000000000000005403 99.0
BYDH3_k127_2799889_0 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol K00347 - 1.6.5.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007159 556.0
BYDH3_k127_2799889_1 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol K00346 - 1.6.5.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005663 382.0
BYDH3_k127_2799889_2 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol K00350 - 1.6.5.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005296 294.0
BYDH3_k127_2799889_3 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol K00349 - 1.6.5.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006487 289.0
BYDH3_k127_2799889_4 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol K00348 - 1.6.5.8 0.000000000000000000000000000000000000000000000000000000000008714 215.0
BYDH3_k127_2799889_5 Protein of unknown function (DUF502) - - - 0.000000000000000000000198 100.0
BYDH3_k127_2925558_0 lysine biosynthetic process via aminoadipic acid - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005092 501.0
BYDH3_k127_2925558_1 PFAM Outer membrane efflux protein K12340 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009014 443.0
BYDH3_k127_2925558_2 Serine dehydratase K01752 - 4.3.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006201 344.0
BYDH3_k127_2929991_0 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004488 586.0
BYDH3_k127_2929991_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 2.7.7.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004902 573.0
BYDH3_k127_2929991_2 TIGRFAM methionine aminopeptidase, type I K01265 - 3.4.11.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005544 407.0
BYDH3_k127_2929991_3 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006417,GO:0006450,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0015935,GO:0019222,GO:0019843,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032268,GO:0032270,GO:0032991,GO:0034248,GO:0034250,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0045727,GO:0045903,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0060255,GO:0065007,GO:0065008,GO:0080090,GO:0097159,GO:1901363,GO:1990904,GO:2000112 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007718 328.0
BYDH3_k127_2929991_4 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 GO:0000028,GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0016070,GO:0016072,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034622,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0048027,GO:0065003,GO:0070181,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000145 217.0
BYDH3_k127_2929991_5 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022613,GO:0032991,GO:0034641,GO:0034645,GO:0042254,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000002233 213.0
BYDH3_k127_2929991_6 Ribosomal protein L17 K02879 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000005053 197.0
BYDH3_k127_2929991_7 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0043021,GO:0043022,GO:0044424,GO:0044444,GO:0044464,GO:0044877 - 0.00000000000000000000000000000000002612 134.0
BYDH3_k127_2929991_8 Belongs to the CarA family K01956 - 6.3.5.5 0.0000000000000000000000000000002268 123.0
BYDH3_k127_2929991_9 Belongs to the bacterial ribosomal protein bL36 family K02919 - - 0.000000000000005762 74.0
BYDH3_k127_2936810_0 Sortilin, neurotensin receptor 3, - - - 0.0 1323.0
BYDH3_k127_2936810_1 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 0.0 1026.0
BYDH3_k127_2936810_2 PFAM Biotin lipoate A B protein ligase K03524 - 6.3.4.15 0.00000000000000000000000000000000000000000000000000000000000009992 221.0
BYDH3_k127_2936810_3 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.000000000000000000000000000000000000000000000000008455 182.0
BYDH3_k127_2943337_0 magnesium chelatase K03405 - 6.6.1.1 2.227e-247 771.0
BYDH3_k127_2943337_1 PFAM Glycosyl transferases group 1 K00754 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003238 598.0
BYDH3_k127_2943337_2 von Willebrand factor, type A - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001406 591.0
BYDH3_k127_2943337_3 Fatty acid hydroxylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009882 311.0
BYDH3_k127_2943337_4 transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000001049 218.0
BYDH3_k127_2967740_0 TPR repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001963 316.0
BYDH3_k127_2967740_2 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 GO:0003674,GO:0003824,GO:0004812,GO:0004823,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006429,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.4 0.0000001009 53.0
BYDH3_k127_2996290_0 family outer membrane protein - - - 0.000000000000000000000000000000000000000000000000000000000000006111 243.0
BYDH3_k127_2996290_1 Stress responsive A/B Barrel Domain - - - 0.00000000000000000000000000000000000000000001331 165.0
BYDH3_k127_2996290_2 Rieske [2Fe-2S] domain - - - 0.000003752 49.0
BYDH3_k127_3014465_0 RibD C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002235 369.0
BYDH3_k127_3014465_1 Domain of Unknown Function (DUF1080) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001287 268.0
BYDH3_k127_3014465_2 Caspase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005019 274.0
BYDH3_k127_3014465_3 Beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000004482 197.0
BYDH3_k127_3014465_4 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000000002221 181.0
BYDH3_k127_3038127_0 Dioxygenase K00449 - 1.13.11.3 0.000000000000000000000000000000000000000000000000000000000000000000000000001265 258.0
BYDH3_k127_3038127_1 helix_turn_helix, arabinose operon control protein - - - 0.0000000000000000000000000000000000000000000000001513 189.0
BYDH3_k127_3038127_2 - - - - 0.0000000000000000000000000000000003387 134.0
BYDH3_k127_3038127_3 - - - - 0.0000000000000000000001815 100.0
BYDH3_k127_3038127_4 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.000000000000000000001855 95.0
BYDH3_k127_3038127_5 Oxidoreductase family, C-terminal alpha/beta domain - - - 0.000000003018 58.0
BYDH3_k127_3063930_0 Beta-lactamase - - - 1.723e-214 676.0
BYDH3_k127_3063930_1 PFAM 2Fe-2S iron-sulfur cluster binding domain K02613 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001732 556.0
BYDH3_k127_3063930_2 Beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000335 306.0
BYDH3_k127_3063930_3 lysine biosynthetic process via aminoadipic acid - - - 0.000000000000000000000000000000007821 127.0
BYDH3_k127_3091444_0 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 1.587e-318 983.0
BYDH3_k127_3091444_1 Helix-hairpin-helix motif - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004728 572.0
BYDH3_k127_3091444_2 PFAM surface antigen variable number repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001754 477.0
BYDH3_k127_3091444_3 photosystem II stabilization - - - 0.0000000000000000000000000000000000000000000000000000000000002672 221.0
BYDH3_k127_3091444_4 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins - - - 0.00000000000000000000000000000000000000000000000000000001056 206.0
BYDH3_k127_3091444_5 - - - - 0.0000000000000000000000000000000000000000000000000000005448 202.0
BYDH3_k127_3091444_6 SnoaL-like domain K06893 - - 0.000000000000000000000000000000000000000000001264 169.0
BYDH3_k127_3091444_7 MORN repeat variant - - - 0.0000000000000000000000000000000000000000000601 168.0
BYDH3_k127_3091444_8 RNA recognition motif - - - 0.000000000000000000000000000000006094 130.0
BYDH3_k127_311931_0 Peptidase dimerisation domain K12941 - - 1.886e-285 884.0
BYDH3_k127_311931_1 Peptidase dimerisation domain K12941 - - 8.237e-263 819.0
BYDH3_k127_311931_2 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K00382 - 1.8.1.4 7.009e-245 764.0
BYDH3_k127_311931_3 Nitroreductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001101 338.0
BYDH3_k127_311931_4 Lumazine binding domain K00793 - 2.5.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003616 285.0
BYDH3_k127_311931_5 PFAM PAP2 superfamily K19302 GO:0003674,GO:0003824,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009605,GO:0009607,GO:0009987,GO:0016051,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019637,GO:0042578,GO:0043207,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044403,GO:0044413,GO:0044415,GO:0044419,GO:0046467,GO:0046493,GO:0050896,GO:0051701,GO:0051704,GO:0051707,GO:0051832,GO:0051834,GO:0052173,GO:0052200,GO:0071704,GO:0075136,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 3.6.1.27 0.000000000000000000000000000000000000000000000000000001201 197.0
BYDH3_k127_311931_6 - - - - 0.000000000000000000000000001769 118.0
BYDH3_k127_311931_7 Belongs to the PRA-CH family K11755 - 3.5.4.19,3.6.1.31 0.000000000000000000000001165 104.0
BYDH3_k127_3122294_0 Motility related/secretion protein - - - 0.0 1173.0
BYDH3_k127_3122294_1 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.000000000000000000000000003707 113.0
BYDH3_k127_3129160_0 Participates in initiation and elongation during chromosome replication K02314 - 3.6.4.12 4.628e-237 743.0
BYDH3_k127_3129160_1 Pyridoxal-dependent decarboxylase conserved domain - - - 1.244e-233 730.0
BYDH3_k127_3129160_2 Electron transfer flavoprotein, alpha subunit K03522 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007409 450.0
BYDH3_k127_3129160_3 alcohol dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001734 419.0
BYDH3_k127_3129160_4 DNA polymerase III K02342 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001974 391.0
BYDH3_k127_3129160_5 Electron transfer flavoprotein K03521 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001398 362.0
BYDH3_k127_3129160_6 PFAM Uncharacterised ACR, COG1259 K08999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000695 294.0
BYDH3_k127_3129160_7 PFAM Na dependent nucleoside transporter K03317 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001949 245.0
BYDH3_k127_3129160_8 Mur ligase middle domain K01924,K02558 - 6.3.2.45,6.3.2.8 0.0000000000000000000000000000114 125.0
BYDH3_k127_3129160_9 HemY protein - - - 0.0000000000000000000002297 99.0
BYDH3_k127_3181393_0 TonB-dependent receptor K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002471 538.0
BYDH3_k127_3181393_1 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K03527 - 1.17.7.4 0.0000000000001855 71.0
BYDH3_k127_32042_0 Helix-turn-helix XRE-family like proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004131 332.0
BYDH3_k127_32042_1 PFAM Mandelate racemase muconate lactonizing enzyme, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007367 329.0
BYDH3_k127_32042_3 Acyl-CoA synthetase (AMP-forming) AMP-acid ligase II K01911 - 6.2.1.26 0.00025 45.0
BYDH3_k127_3254620_0 Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001243 544.0
BYDH3_k127_3254620_1 Protein of unknown function (DUF3822) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002977 281.0
BYDH3_k127_3254620_2 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762,K13421 - 2.4.2.10,4.1.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000123 280.0
BYDH3_k127_3254620_3 NUDIX domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004294 252.0
BYDH3_k127_3254620_4 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.0000000000000000000000000000000000000000000000000000000000000000002941 231.0
BYDH3_k127_3254620_5 Cysteine-rich secretory protein family - - - 0.00000000005157 68.0
BYDH3_k127_3270513_0 GAF domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009109 372.0
BYDH3_k127_3270513_1 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000006898 241.0
BYDH3_k127_3307348_0 PFAM metallophosphoesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003448 355.0
BYDH3_k127_3307348_1 Serine threonine protein kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000003961 215.0
BYDH3_k127_3355072_0 TIGRFAM Gliding motility-associated lipoprotein GldK - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001935 531.0
BYDH3_k127_3355072_1 Uroporphyrinogen-III synthase K01719 - 4.2.1.75 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008451 412.0
BYDH3_k127_3355072_2 Type IX secretion system membrane protein PorP/SprF - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000369 402.0
BYDH3_k127_3355072_3 TIGRFAM gliding motility-associated protein GldL - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001399 351.0
BYDH3_k127_3355072_4 Involved in the biosynthesis of porphyrin-containing compound - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002219 325.0
BYDH3_k127_3355072_5 TIGRFAM Gliding motility-associated protein GldM - - - 0.000000000000000000000000000000000000000000000000000000000000000008971 244.0
BYDH3_k127_3355072_6 TIGRFAM gliding motility associated protien GldN - - - 0.000000000000000000000000000000000000000006883 165.0
BYDH3_k127_3355072_7 PFAM Acetyltransferase (GNAT) family - - - 0.00000000000000000000000000000000004828 136.0
BYDH3_k127_3376992_0 DegT/DnrJ/EryC1/StrS aminotransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001617 528.0
BYDH3_k127_3376992_1 Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008969 350.0
BYDH3_k127_3376992_2 metabolite transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004692 254.0
BYDH3_k127_3376992_3 Stress responsive A/B Barrel Domain - - - 0.0000000000000000000000000000000000000000000000452 172.0
BYDH3_k127_3376992_4 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03386 - 1.11.1.15 0.0000000000000000000000000000001706 123.0
BYDH3_k127_3376992_5 SdpI/YhfL protein family - - - 0.000000000000000000000000001725 115.0
BYDH3_k127_3389908_0 S-adenosylmethionine-dependent methyltransferase K06969 - 2.1.1.191 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002409 375.0
BYDH3_k127_3389908_1 deoxyhypusine monooxygenase activity K01256,K01387 - 3.4.11.2,3.4.24.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008142 336.0
BYDH3_k127_3389908_2 LytTr DNA-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001381 313.0
BYDH3_k127_3389908_3 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03437 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005011 301.0
BYDH3_k127_3389908_4 PFAM histidine kinase internal region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005363 287.0
BYDH3_k127_3389908_5 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007644 282.0
BYDH3_k127_3389908_6 Protein of unknown function (DUF3365) - - - 0.00000000000000000000000000000008475 131.0
BYDH3_k127_3389908_7 Domain of unknown function (DUF5117) - - - 0.00000000000003794 74.0
BYDH3_k127_3416718_0 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 1.355e-295 922.0
BYDH3_k127_3416718_1 Homocysteine S-methyltransferase K00548 - 2.1.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003223 372.0
BYDH3_k127_3416718_2 PFAM Ppx GppA phosphatase K01524 - 3.6.1.11,3.6.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003886 370.0
BYDH3_k127_3416718_3 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 0.000000000000000000000000000000000000000000000000000001738 192.0
BYDH3_k127_3428857_0 TIGRFAM Na H antiporter NhaC K03315 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001765 611.0
BYDH3_k127_3428857_1 Saccharopine dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001796 512.0
BYDH3_k127_3428857_2 PFAM 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005802 456.0
BYDH3_k127_3428857_3 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001925 367.0
BYDH3_k127_3428857_4 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003358 287.0
BYDH3_k127_3428857_5 Belongs to the enoyl-CoA hydratase isomerase family K01692,K01715 - 4.2.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002063 269.0
BYDH3_k127_3428857_6 Major facilitator superfamily K08151 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001905 257.0
BYDH3_k127_3428857_7 Domain of unknown function (DUF4442) - - - 0.00000000000000000000000000000000000000000000000000000000000000000005647 234.0
BYDH3_k127_3428857_8 3'-5' exonuclease - - - 0.000000000000000000000000000000000000000000000000000006051 195.0
BYDH3_k127_3428857_9 Protein involved in cellulose biosynthesis - - - 0.0000000000000000000004478 107.0
BYDH3_k127_3438225_0 GH3 auxin-responsive promoter - - - 6.69e-258 802.0
BYDH3_k127_3438225_1 PFAM von Willebrand factor type A K07114 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001441 494.0
BYDH3_k127_3438225_10 small membrane protein - - - 0.00000000000000000000000000000002351 129.0
BYDH3_k127_3438225_2 protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002609 340.0
BYDH3_k127_3438225_3 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000225 279.0
BYDH3_k127_3438225_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000000003748 234.0
BYDH3_k127_3438225_5 Protein of unknown function (DUF3822) - - - 0.0000000000000000000000000000000000000000000000000000000000001042 218.0
BYDH3_k127_3438225_6 PFAM Lysine exporter protein (LYSE YGGA) - - - 0.000000000000000000000000000000000000000000000000000227 192.0
BYDH3_k127_3438225_7 - - - - 0.0000000000000000000000000000000000000000000001241 179.0
BYDH3_k127_3438225_8 Nudix hydrolase K03574 - 3.6.1.55 0.0000000000000000000000000000000000000000009035 162.0
BYDH3_k127_3438225_9 Protein of unknown function (DUF1573) - - - 0.000000000000000000000000000000000000009825 149.0
BYDH3_k127_34428_0 Required for chromosome condensation and partitioning K03529 - - 0.0 1396.0
BYDH3_k127_34428_1 PFAM Major Facilitator Superfamily K08191 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003107 492.0
BYDH3_k127_34428_2 Required for chromosome condensation and partitioning K03529 - - 0.00000000000000000000000000000000000000000000001188 171.0
BYDH3_k127_34428_3 self proteolysis - - - 0.00000000000000000000000005035 124.0
BYDH3_k127_3443421_0 MacB-like periplasmic core domain K02004 - - 1.354e-237 763.0
BYDH3_k127_3443421_1 Major facilitator superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002097 424.0
BYDH3_k127_3443421_2 Putative beta-barrel porin-2, OmpL-like. bbp2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002446 397.0
BYDH3_k127_3443421_3 Protein of unknown function (DUF1572) - - - 0.00000000000000000000000000000000000000000000000000000000000000002656 228.0
BYDH3_k127_3443421_4 Transcriptional regulator PadR-like family - - - 0.000000000000000000000000000000000000000000002064 166.0
BYDH3_k127_3443421_5 - - - - 0.0000000108 56.0
BYDH3_k127_3443421_6 Fatty acid desaturase K00507 - 1.14.19.1 0.00001795 48.0
BYDH3_k127_3497741_0 Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate K01712 - 4.2.1.49 0.0 1058.0
BYDH3_k127_3497741_1 Belongs to the glycosyl hydrolase 30 family K01201 - 3.2.1.45 3.656e-221 695.0
BYDH3_k127_3497741_10 Phosphate acyltransferases - - - 0.00000000000000000000000000000000000000000000000000000000000000007969 226.0
BYDH3_k127_3497741_11 Outer membrane protein beta-barrel domain - - - 0.000000000000000000000000000000000000000000000000000000000003011 215.0
BYDH3_k127_3497741_12 Belongs to the folylpolyglutamate synthase family K11754 - 6.3.2.12,6.3.2.17 0.00000000000000000000000249 104.0
BYDH3_k127_3497741_13 - - - - 0.0000000000858 63.0
BYDH3_k127_3497741_14 Domain of Unknown Function (DUF1080) - - - 0.0000000004168 60.0
BYDH3_k127_3497741_2 Oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000754 592.0
BYDH3_k127_3497741_3 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962 - 2.1.3.15,6.4.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002563 519.0
BYDH3_k127_3497741_4 PFAM Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004344 451.0
BYDH3_k127_3497741_5 GMC oxidoreductase K03333 - 1.1.3.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004498 364.0
BYDH3_k127_3497741_6 GMC oxidoreductase K03333 - 1.1.3.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001599 311.0
BYDH3_k127_3497741_7 esterase of the alpha-beta hydrolase superfamily K07001 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003735 263.0
BYDH3_k127_3497741_8 transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000005164 248.0
BYDH3_k127_3497741_9 Belongs to the folylpolyglutamate synthase family K11754 - 6.3.2.12,6.3.2.17 0.000000000000000000000000000000000000000000000000000000000000000002723 229.0
BYDH3_k127_3539378_0 TonB-dependent Receptor Plug Domain - - - 5.269e-219 697.0
BYDH3_k127_3539378_1 Response regulator of the LytR AlgR family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003076 286.0
BYDH3_k127_3539378_2 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000007774 260.0
BYDH3_k127_3539378_3 - - - - 0.0000000000000000000000000000000000000000000000000000000003306 209.0
BYDH3_k127_3539378_4 Carotenoid biosynthesis protein - - - 0.000000000000000000000000000000000000000000000001138 184.0
BYDH3_k127_3539378_5 Flavin containing amine oxidoreductase K10027 - 1.3.99.26,1.3.99.28,1.3.99.29,1.3.99.31 0.00000000000000000000000000000000001116 137.0
BYDH3_k127_3551879_0 Dipeptidyl peptidase IV (DPP IV) N-terminal region - - - 0.0 1010.0
BYDH3_k127_3551879_1 malate quinone oxidoreductase K00116 - 1.1.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001662 589.0
BYDH3_k127_3568434_0 Sulfatase K01130 - 3.1.6.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000292 453.0
BYDH3_k127_3568434_3 PFAM Family of - - - 0.00000000000000005327 94.0
BYDH3_k127_3631629_0 Glycosyl hydrolase, family 20, catalytic domain - - - 2.375e-223 713.0
BYDH3_k127_3631629_1 Glycosyl hydrolase, family 20, catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003112 433.0
BYDH3_k127_3631629_2 Sulfatase K01130 - 3.1.6.1 0.00000000000000000001282 93.0
BYDH3_k127_3690137_0 PFAM Adenylate and Guanylate cyclase catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008621 444.0
BYDH3_k127_3690137_1 Subtilase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005126 261.0
BYDH3_k127_3707653_0 acyl-CoA dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003872 349.0
BYDH3_k127_3707653_1 PFAM Uncharacterised protein family (UPF0104) K07027 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005107 312.0
BYDH3_k127_3707653_2 PFAM Peptidase, membrane zinc metallopeptidase K06973 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001053 304.0
BYDH3_k127_3707653_3 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose K03272 - 2.7.1.167,2.7.7.70 0.0000000000000000000000000000000000000000000000000000000002193 206.0
BYDH3_k127_3741556_0 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798 - - 0.0000000000000000000000000000000000000000000000000009227 188.0
BYDH3_k127_3741556_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798,K15727 - - 0.0000000000000000000000000000000000000007883 152.0
BYDH3_k127_3741556_2 Thioredoxin-like - - - 0.00000000000000000000000000000000001142 141.0
BYDH3_k127_3741556_3 exo-alpha-(2->6)-sialidase activity - - - 0.00000000000000000000000000000692 122.0
BYDH3_k127_3760256_0 Belongs to the agmatine deiminase family K10536 - 3.5.3.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001759 575.0
BYDH3_k127_3760256_1 TonB-dependent Receptor Plug - - - 0.0000000000000000000000000000000000000000000000000000000000000000135 237.0
BYDH3_k127_3774707_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1257.0
BYDH3_k127_3774707_1 OmpA family - - - 6.078e-252 794.0
BYDH3_k127_3774707_2 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 0.000000000000000000000000000000000000000000000000000000000000002285 219.0
BYDH3_k127_3774707_3 zinc metalloprotease K11749 - - 0.0000000004449 60.0
BYDH3_k127_3777331_0 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 2.022e-210 662.0
BYDH3_k127_3777331_1 Sulfatase K01130 - 3.1.6.1 0.0000000000000000000000000000000000000007518 162.0
BYDH3_k127_3777331_2 - - - - 0.00000000000000000001979 96.0
BYDH3_k127_3813655_0 TIGRFAM phytoene desaturase K10027 - 1.3.99.26,1.3.99.28,1.3.99.29,1.3.99.31 4.342e-217 683.0
BYDH3_k127_3813655_1 DEAD DEAH box helicase K03724 - - 3.075e-209 657.0
BYDH3_k127_3813655_10 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000004011 167.0
BYDH3_k127_3813655_11 - - - - 0.00000000000000001255 93.0
BYDH3_k127_3813655_2 phosphate transporter K03306 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002342 575.0
BYDH3_k127_3813655_3 DEAD DEAH box helicase K03724 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000414 531.0
BYDH3_k127_3813655_4 PFAM Squalene phytoene synthase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003643 385.0
BYDH3_k127_3813655_5 PFAM MerR family regulatory protein K22491 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000118 313.0
BYDH3_k127_3813655_6 Bacterial capsule synthesis protein K07282 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007188 316.0
BYDH3_k127_3813655_7 Calcineurin-like phosphoesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001168 257.0
BYDH3_k127_3813655_8 NUDIX domain K01823 - 5.3.3.2 0.000000000000000000000000000000000000000000000000000000000000000001586 231.0
BYDH3_k127_3813655_9 PFAM ABC transporter K01990 - - 0.00000000000000000000000000000000000000000000000000167 189.0
BYDH3_k127_3820354_0 PFAM amidohydrolase - - - 7.042e-210 672.0
BYDH3_k127_3820354_1 PFAM amidohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000003663 220.0
BYDH3_k127_3820354_2 Homoserine dehydrogenase K00003 - 1.1.1.3 0.0000000000000000000001443 100.0
BYDH3_k127_3833779_0 Y_Y_Y domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004637 514.0
BYDH3_k127_3833779_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006956 285.0
BYDH3_k127_3833779_2 Caspase domain - - - 0.00000000000000000000000000004788 118.0
BYDH3_k127_3833779_3 Caspase domain - - - 0.00000000000000000000000171 103.0
BYDH3_k127_3833779_4 DinB superfamily - - - 0.00000000000000003311 83.0
BYDH3_k127_3844021_0 peptidase dimerisation domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002529 464.0
BYDH3_k127_3844021_1 Thiazole biosynthesis protein ThiG K00459 - 1.13.12.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006041 337.0
BYDH3_k127_3844021_2 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03768 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000008738 266.0
BYDH3_k127_3844021_3 - - - - 0.00000000000000000000000769 104.0
BYDH3_k127_3844021_4 4 iron, 4 sulfur cluster binding K00176 - 1.2.7.3 0.000000000000000001812 89.0
BYDH3_k127_3844021_5 SET domain K07117 - - 0.000000000000001083 82.0
BYDH3_k127_3887799_0 Endoribonuclease L-PSP - - - 2.992e-227 712.0
BYDH3_k127_3887799_1 PFAM Glycoside hydrolase, family 20, catalytic core K12373 - 3.2.1.52 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005279 434.0
BYDH3_k127_3887799_2 amino acid K03294 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003427 329.0
BYDH3_k127_3891848_0 ABC-2 type transporter K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003891 514.0
BYDH3_k127_3891848_1 transport, permease protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002087 477.0
BYDH3_k127_3891848_2 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000014 289.0
BYDH3_k127_389227_0 Belongs to the ompA family K03640 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001876 516.0
BYDH3_k127_389227_1 FtsX-like permease family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001524 504.0
BYDH3_k127_389227_2 Haem-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000001267 231.0
BYDH3_k127_389227_3 peptidase S9 prolyl oligopeptidase active site domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000001718 222.0
BYDH3_k127_389227_4 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) - - - 0.00000000000000000000000000000000000000000000000000005704 193.0
BYDH3_k127_389227_5 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.000000000000000000000000000000000002463 141.0
BYDH3_k127_3896329_0 PFAM ATPase family associated with various cellular activities (AAA) K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004204 518.0
BYDH3_k127_3896329_1 TIGRFAM exonuclease, DNA polymerase III, epsilon subunit family K02342 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009565 463.0
BYDH3_k127_3896329_2 - K07112 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002269 415.0
BYDH3_k127_3896329_3 Alpha-acetolactate decarboxylase K01575 - 4.1.1.5 0.00000000000000000000000000000000000000000000000000000000007613 210.0
BYDH3_k127_3896329_4 manually curated - - - 0.00000000000000000000000000000008766 124.0
BYDH3_k127_3896329_5 Sugar efflux transporter for intercellular exchange K15383 - - 0.00000000000000000000004315 101.0
BYDH3_k127_3909855_0 ribonuclease, Rne Rng family K08301 - - 4.523e-251 783.0
BYDH3_k127_3909855_1 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000459 222.0
BYDH3_k127_3909855_2 Molecular chaperone. Has ATPase activity K04079 - - 0.00000000000000000000000000000000000000000000000000000000001468 207.0
BYDH3_k127_3909855_3 - - - - 0.000005682 48.0
BYDH3_k127_391224_0 Alpha-2-Macroglobulin K06894 - - 0.0 2104.0
BYDH3_k127_391224_1 Na+-dependent bicarbonate transporter superfamily K07086 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008059 493.0
BYDH3_k127_391224_2 D-alanyl-D-alanine carboxypeptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000006754 238.0
BYDH3_k127_391224_3 chorismate mutase K04516 - 5.4.99.5 0.0000000000000000000000000000002002 124.0
BYDH3_k127_3941126_0 Polysaccharide biosynthesis protein - - - 7.852e-228 721.0
BYDH3_k127_3941126_1 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000301 501.0
BYDH3_k127_3941126_2 long-chain fatty acid transport protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002598 253.0
BYDH3_k127_3941126_3 long-chain fatty acid transport protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001251 252.0
BYDH3_k127_3949152_0 Sortilin, neurotensin receptor 3, - - - 0.0 1403.0
BYDH3_k127_3949152_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001931 366.0
BYDH3_k127_3949152_2 Sortilin, neurotensin receptor 3, - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005187 243.0
BYDH3_k127_3949152_3 Domain of unknown function (DUF4956) - - - 0.00000000000000000000000000000000004989 141.0
BYDH3_k127_3949215_0 AMP-binding enzyme - - - 4.479e-205 651.0
BYDH3_k127_3949215_1 PFAM Dienelactone hydrolase family K01061 - 3.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003998 322.0
BYDH3_k127_3949215_2 Protein of unknown function (DUF418) K07148 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000021 302.0
BYDH3_k127_3949215_3 TIGRFAM Bacteroidetes-specific - - - 0.000000000000000000000000000000000000000000000000000000000000000004217 236.0
BYDH3_k127_3949215_4 Protein of unknown function (DUF2911) - - - 0.0000000000000000000000000000000000000000000000001488 182.0
BYDH3_k127_3949215_5 CBS domain - - - 0.000000000000000000000000000000000000000000002288 168.0
BYDH3_k127_3949215_6 DinB family - - - 0.00000000000000000000000000000000000009164 147.0
BYDH3_k127_3949215_7 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000002363 150.0
BYDH3_k127_3949215_8 C-terminal domain of CHU protein family - - - 0.00000000000000000000000000000008882 143.0
BYDH3_k127_3949215_9 C-terminal domain of CHU protein family - - - 0.000008612 59.0
BYDH3_k127_3980035_0 PFAM TonB-dependent Receptor Plug Domain K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000059 273.0
BYDH3_k127_3980035_1 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.000000000000000000000000000000000000000000000000000000000000000000000000007468 253.0
BYDH3_k127_3980035_2 Acetyl propionyl-CoA carboxylase alpha subunit K01960 - 6.4.1.1 0.000000000000000000000000000000000000000000000000000004889 195.0
BYDH3_k127_3990478_0 ABC transporter transmembrane region K11085 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006194 389.0
BYDH3_k127_3990478_1 ABC transporter transmembrane region K11085 - - 0.00000000000000000000000000000000000000000000000000000000000000001935 226.0
BYDH3_k127_3990478_2 membrane - - - 0.0000000000000000000000000001387 119.0
BYDH3_k127_4014581_0 Belongs to the glycosyl hydrolase 2 family - - - 8.14e-221 697.0
BYDH3_k127_4014581_1 KTSC domain - - - 0.0000000000000000000000000000000000000000000000000000000002624 206.0
BYDH3_k127_4014581_2 PspC domain K03973 - - 0.000000000006145 67.0
BYDH3_k127_4014581_3 - - - - 0.0002055 53.0
BYDH3_k127_4019704_0 Involved in the tonB-independent uptake of proteins - - - 1.213e-299 948.0
BYDH3_k127_4019704_1 TonB-dependent Receptor Plug - - - 3.437e-282 880.0
BYDH3_k127_4019704_2 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00627 - 2.3.1.12 1.06e-213 676.0
BYDH3_k127_4019704_3 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 - 3.4.25.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000179 297.0
BYDH3_k127_4019704_4 Domain of unknown function (DUF4249) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006582 271.0
BYDH3_k127_4039691_0 Carboxypeptidase regulatory-like domain - - - 2.383e-297 938.0
BYDH3_k127_4039691_1 3-oxoacid CoA-transferase, a subunit K01027,K01028,K01031,K01034 - 2.8.3.5,2.8.3.6,2.8.3.8,2.8.3.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002939 417.0
BYDH3_k127_4039691_2 TIGRFAM 3-oxoacid CoA-transferase, B subunit K01029,K01032 - 2.8.3.5,2.8.3.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000243 376.0
BYDH3_k127_4039691_3 GDSL family lipolytic protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001758 323.0
BYDH3_k127_4039691_4 TIGRFAM Gliding motility-associated protein, GldC - - - 0.0000000000000000000000000000000000000000006624 159.0
BYDH3_k127_4039691_5 23S rRNA-intervening sequence protein - - - 0.0000000000000000000000000000000000000004888 151.0
BYDH3_k127_404139_0 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000834 454.0
BYDH3_k127_404139_1 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine K03648 GO:0003674,GO:0003824,GO:0004844,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006285,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097506,GO:0097510,GO:0140097,GO:1901360 3.2.2.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001751 366.0
BYDH3_k127_404139_2 protein affecting Mg2 Co2 transport K06195 - - 0.000000000000000000000000000000000000000000000000000000000000001007 220.0
BYDH3_k127_404139_3 Methyltransferase domain - - - 0.0000000000000000001219 93.0
BYDH3_k127_4047047_0 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000009266 266.0
BYDH3_k127_4047047_1 Fatty acid hydroxylase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000006884 222.0
BYDH3_k127_4047047_2 CAAX protease self-immunity K07052 - - 0.000000000000000000000000000000000000000000000000000007074 197.0
BYDH3_k127_4047047_3 Helix-turn-helix domain - - - 0.00000000000000000007047 94.0
BYDH3_k127_4047047_4 Pentapeptide repeats (8 copies) - - - 0.0000001009 53.0
BYDH3_k127_4107825_0 PFAM UvrD REP helicase K03657 - 3.6.4.12 0.0 1172.0
BYDH3_k127_4107825_1 Domain of unknown function (DUF4290) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002044 250.0
BYDH3_k127_4107825_2 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000624 243.0
BYDH3_k127_4131879_0 Oxidoreductase domain protein - - - 1.462e-254 791.0
BYDH3_k127_4131879_1 LexA-binding, inner membrane-associated putative hydrolase K07038 - - 0.00000000000000000000000000000000000000000000000001915 184.0
BYDH3_k127_4131879_2 - - - - 0.000000000000000000000000000000002256 136.0
BYDH3_k127_4131879_3 - - - - 0.000000000000000000000000188 110.0
BYDH3_k127_4131879_4 - - - - 0.00000003088 60.0
BYDH3_k127_4143001_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007518 383.0
BYDH3_k127_4143001_1 Curli production assembly/transport component CsgG - - - 0.00000000000000000000000000000000000000000000000001519 203.0
BYDH3_k127_4143001_2 PFAM Transposase IS200 like - - - 0.0000000000000000000000000000000000000000001221 166.0
BYDH3_k127_4143001_3 Belongs to the glycosyl hydrolase 43 family - - - 0.000000000000000000000000001175 130.0
BYDH3_k127_4143001_4 exported protein of Yersinia enterocolitica subsp. enterocolitica 8081 UniRef RepID A1JKR6_YERE8 - - - 0.00000000001864 78.0
BYDH3_k127_419781_0 PFAM Family of - - - 0.0 1230.0
BYDH3_k127_419781_1 Dehydrogenase E1 component K00615 - 2.2.1.1 0.0 1181.0
BYDH3_k127_419781_10 Biopolymer transport protein ExbD/TolR - - - 0.0000000000000000000000000000000000000000000000000000002217 199.0
BYDH3_k127_419781_11 Type I restriction enzyme R Protein - - - 0.00000000000000000000000000000000000000000000003309 173.0
BYDH3_k127_419781_12 - - - - 0.0000000000000000000000000000000000000000007864 165.0
BYDH3_k127_419781_13 - - - - 0.00000000000000000000000000000003153 130.0
BYDH3_k127_419781_14 transferase activity, transferring acyl groups - - - 0.00007327 51.0
BYDH3_k127_419781_2 Belongs to the AlaDH PNT family K00259 - 1.4.1.1 3.73e-196 616.0
BYDH3_k127_419781_3 CheY-like receiver AAA-type ATPase and DNA-binding domains - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004616 541.0
BYDH3_k127_419781_4 COGs COG2270 Permease of the major facilitator superfamily K06902 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001388 500.0
BYDH3_k127_419781_5 Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile K01241 - 3.2.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004743 418.0
BYDH3_k127_419781_6 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 GO:0000408,GO:0002949,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070525,GO:0071704,GO:0090304,GO:1901360 2.3.1.234 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004052 374.0
BYDH3_k127_419781_7 PFAM Acyl-protein synthetase, LuxE - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007741 378.0
BYDH3_k127_419781_8 Predicted periplasmic lipoprotein (DUF2279) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001144 327.0
BYDH3_k127_419781_9 Biopolymer transport protein ExbD/TolR K03559 - - 0.000000000000000000000000000000000000000000000000000000000000005257 219.0
BYDH3_k127_4227966_0 Membrane-bound serine protease (ClpP class) K07403 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007074 546.0
BYDH3_k127_4227966_1 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009876 319.0
BYDH3_k127_4227966_2 PFAM LysM domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006081 298.0
BYDH3_k127_4227966_3 3-demethylubiquinone-9 3-O-methyltransferase activity K00568 - 2.1.1.222,2.1.1.64 0.00000000000000000000000000000000000003545 153.0
BYDH3_k127_4227966_4 Domain of unknown function (DUF4905) - - - 0.000000000000000000159 96.0
BYDH3_k127_4229807_0 Crp Fnr family transcriptional regulator K01420 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002119 266.0
BYDH3_k127_4229807_1 Putative PepSY_TM-like K09939 - - 0.0000000000000000000000000000000000336 136.0
BYDH3_k127_4229807_2 PFAM Rhodanese-like domain - - - 0.00000000000000000000000000000001616 128.0
BYDH3_k127_4229807_3 Sulfurtransferase - - - 0.0000000000000000000000000000233 118.0
BYDH3_k127_4229807_4 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS - - - 0.000000000000000002809 87.0
BYDH3_k127_4234922_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.0 1495.0
BYDH3_k127_4234922_1 TIGRFAM gliding motility-associated lipoprotein GldJ - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006594 514.0
BYDH3_k127_4234922_2 PFAM major facilitator superfamily MFS_1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003826 361.0
BYDH3_k127_4234922_3 Psort location Cytoplasmic, score 8.96 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002961 334.0
BYDH3_k127_4234922_4 Lipid A Biosynthesis N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000001033 196.0
BYDH3_k127_4234922_5 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K15727 - - 0.0000000000000000000000000000000000006332 141.0
BYDH3_k127_4234922_6 AhpC/TSA family - - - 0.00000000000000005566 87.0
BYDH3_k127_4264373_0 ABC-2 type transporter - - - 0.0 1320.0
BYDH3_k127_4264373_1 DNA polymerase Ligase (LigD) - - - 0.0 1017.0
BYDH3_k127_4264373_10 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.0000000000000004143 83.0
BYDH3_k127_4264373_2 Belongs to the peptidase S41A family K03797 - 3.4.21.102 1.237e-250 790.0
BYDH3_k127_4264373_3 transporter - - - 1.255e-213 674.0
BYDH3_k127_4264373_4 PFAM Histone deacetylase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000106 432.0
BYDH3_k127_4264373_5 TPM domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004462 325.0
BYDH3_k127_4264373_6 TPR repeat-containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000001895 251.0
BYDH3_k127_4264373_7 TraB family K09973 - - 0.000000000000000000000000000000000000000000000000000000000000000007728 236.0
BYDH3_k127_4264373_8 - - - - 0.0000000000000000000000000000000000000000000000000000000126 205.0
BYDH3_k127_4264373_9 unusual protein kinase - - - 0.000000000000000000000000000000000000000008002 156.0
BYDH3_k127_4276373_0 lysine biosynthetic process via aminoadipic acid - - - 0.0 1021.0
BYDH3_k127_4276373_1 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 2.65e-222 694.0
BYDH3_k127_4276373_2 PFAM Peptidase S41 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008707 444.0
BYDH3_k127_4276373_3 COGs COG3970 Fumarylacetoacetate (FAA) hydrolase family protein K14259 - 4.2.1.141 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002106 331.0
BYDH3_k127_4276373_4 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes K03118 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005964 318.0
BYDH3_k127_4276373_5 Ribose 5-phosphate isomerase K01808 - 5.3.1.6 0.000000000000000000000000000000000000000000000000000000000000002394 219.0
BYDH3_k127_4276373_6 TPM domain K06872 - - 0.00000006349 57.0
BYDH3_k127_4278322_0 guanyl-nucleotide exchange factor activity K03117,K12684,K19231,K20276 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000026 288.0
BYDH3_k127_4278322_1 Caspase domain - - - 0.00000000000000000000000000000000000000000000000000000000000001932 224.0
BYDH3_k127_4278322_2 Domain of unknown function (DUF4347) - - - 0.00000000000000000000000000000000001713 156.0
BYDH3_k127_4278322_3 PFAM peptidase M28 - - - 0.000000000000000000000000000001801 123.0
BYDH3_k127_4303239_0 Belongs to the glutathione peroxidase family K00432 - 1.11.1.9 0.000000000000000000000000000000000000000000000000000000000000001948 222.0
BYDH3_k127_4303239_1 Domain of unknown function (DUF4382) - - - 0.000000000000000000000000000000000000000000000000000000000000003073 226.0
BYDH3_k127_4303239_2 membrane protein (DUF2154) - - - 0.0000000000000000000000000000000000000000000000000000000001947 213.0
BYDH3_k127_4303239_3 Belongs to the glutathione peroxidase family K00432 - 1.11.1.9 0.00000000000000000003204 91.0
BYDH3_k127_4303239_4 Domain of unknown function (DUF4288) - - - 0.00000000000222 70.0
BYDH3_k127_4308626_0 Y_Y_Y domain - - - 0.0 1335.0
BYDH3_k127_4308626_1 Pkd domain containing protein - - - 0.0000000000000000000000000000000001276 140.0
BYDH3_k127_4324541_0 type I phosphodiesterase nucleotide pyrophosphatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001024 305.0
BYDH3_k127_4324541_1 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.0000000000000000000000000000000000000000000000000000000000000000003202 249.0
BYDH3_k127_4371264_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 6e-323 994.0
BYDH3_k127_4371264_1 Belongs to the ompA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002273 559.0
BYDH3_k127_4371264_2 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 GO:0003674,GO:0003824,GO:0004477,GO:0004488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006730,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016645,GO:0016646,GO:0016787,GO:0016810,GO:0016814,GO:0019238,GO:0044237,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0055114 1.5.1.5,3.5.4.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004995 377.0
BYDH3_k127_4371264_3 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 - 4.3.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000405 295.0
BYDH3_k127_4385642_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K15726 - - 0.0 1924.0
BYDH3_k127_4385642_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K15727 - - 0.000000000000000000000000000000000000000000000000000000000005039 213.0
BYDH3_k127_4385642_2 - - - - 0.0000000000001982 75.0
BYDH3_k127_4438590_0 ATP-dependent DNA helicase RecQ K03654 - 3.6.4.12 1.733e-224 712.0
BYDH3_k127_4438590_1 Belongs to the phosphoglycerate kinase family K00927 - 2.7.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003345 583.0
BYDH3_k127_4438590_2 Cell division protein - - - 0.0000000000000000756 82.0
BYDH3_k127_4510967_0 TonB dependent receptor - - - 0.0 1091.0
BYDH3_k127_4510967_1 Predicted permease K07089 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008678 488.0
BYDH3_k127_4510967_2 arsenical-resistance protein K03325 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000593 487.0
BYDH3_k127_4510967_3 Pkd domain containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001459 412.0
BYDH3_k127_4510967_4 PFAM Low molecular weight phosphotyrosine protein phosphatase K03741 - 1.20.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000009092 252.0
BYDH3_k127_4510967_5 Protein of unknown function (DUF664) - - - 0.000000000000000000000000000000000000000000000000000002289 196.0
BYDH3_k127_4510967_6 Thioredoxin domain - - - 0.000000000000000000000001114 104.0
BYDH3_k127_456273_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002526 450.0
BYDH3_k127_456273_1 fatty acid desaturase K00508 - 1.14.19.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002528 382.0
BYDH3_k127_456273_2 'Cold-shock' DNA-binding domain - - - 0.0000000000000000000000000000000000000000000003741 171.0
BYDH3_k127_456273_3 - - - - 0.00000004942 59.0
BYDH3_k127_4576947_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 1.755e-244 792.0
BYDH3_k127_4576947_1 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 GO:0003674,GO:0003824,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016491,GO:0016725,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046429,GO:0046490,GO:0052592,GO:0055114,GO:0071704,GO:0090407,GO:1901135,GO:1901576 1.17.7.1,1.17.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001139 535.0
BYDH3_k127_4576947_2 ABC-type transport system involved in resistance to organic solvents, ATPase component K02065 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002245 390.0
BYDH3_k127_4576947_3 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001659 292.0
BYDH3_k127_4576947_4 ABC-type transport system involved in resistance to organic solvents permease component K02066 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001409 287.0
BYDH3_k127_4576947_5 ABC-type transport system involved in resistance to organic solvents permease component K02066 - - 0.000000007796 57.0
BYDH3_k127_4588111_0 PFAM Glutamine amidotransferase, class-II K00764 - 2.4.2.14 0.0 1011.0
BYDH3_k127_4588111_1 PFAM glycosyl transferase family 9 K02843 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004322 512.0
BYDH3_k127_4588111_2 EVE domain - - - 0.000000000000000000000000000000000000000000000002888 175.0
BYDH3_k127_4588111_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.00000000000000000000000427 106.0
BYDH3_k127_4588111_4 - - - - 0.000000000279 72.0
BYDH3_k127_4649567_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 GO:0003674,GO:0003824,GO:0004360,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006002,GO:0006040,GO:0006047,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0016740,GO:0016769,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.6.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002891 454.0
BYDH3_k127_4649567_1 PFAM Starch synthase catalytic domain K00703 - 2.4.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001376 447.0
BYDH3_k127_4649567_2 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 GO:0003674,GO:0003824,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006573,GO:0006575,GO:0006732,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016874,GO:0016879,GO:0016881,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901564,GO:1901566,GO:1901576,GO:1901605 6.3.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001287 282.0
BYDH3_k127_4649567_3 Domain of unknown function (DUF4270) - - - 0.0000000000000000000005383 110.0
BYDH3_k127_4654792_0 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 2.035e-201 636.0
BYDH3_k127_4654792_1 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007148 377.0
BYDH3_k127_4693264_0 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001114 445.0
BYDH3_k127_4693264_1 Polysaccharide biosynthesis protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001343 398.0
BYDH3_k127_4693264_2 tRNA (guanine(37)-N(1))-methyltransferase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001865 284.0
BYDH3_k127_4693264_3 O-methyltransferase activity - - - 0.0000000000000000000000000000000000000000000000000000000002358 211.0
BYDH3_k127_4693264_4 Belongs to the UDP-N-acetylglucosamine 2-epimerase family K01791 - 5.1.3.14 0.00000000000000000000000000000000000002681 144.0
BYDH3_k127_4693264_5 Glycosyl transferases group 1 - - - 0.0000000000000000000003887 102.0
BYDH3_k127_474591_0 two component, sigma54 specific, transcriptional regulator, Fis family - - - 2.889e-231 722.0
BYDH3_k127_474591_1 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001198 390.0
BYDH3_k127_474591_2 Diacylglycerol kinase - - - 0.00000000000000000000000000000000000000000000000000008931 196.0
BYDH3_k127_474591_3 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.0000000000000000000000000005549 115.0
BYDH3_k127_4770932_0 Sodium/calcium exchanger protein K07301 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002115 273.0
BYDH3_k127_4770932_1 Universal stress protein - - - 0.0000000000000000000000000000000000000000000000000003062 194.0
BYDH3_k127_4770932_2 - - - - 0.000000000000000000000000000000000000002693 150.0
BYDH3_k127_4770932_3 Universal stress protein family - - - 0.000000000000000000000000000000001111 141.0
BYDH3_k127_4770932_4 Cation transporter/ATPase, N-terminus K01537 - 3.6.3.8 0.0000000000000000000001663 103.0
BYDH3_k127_4770932_5 COG0589 Universal stress protein UspA and related nucleotide-binding proteins - - - 0.0000008463 58.0
BYDH3_k127_481_0 lysine biosynthetic process via aminoadipic acid - - - 1.388e-246 785.0
BYDH3_k127_481_1 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002983 347.0
BYDH3_k127_481_2 PFAM 2Fe-2S iron-sulfur cluster binding domain K02613 - - 0.0000007625 51.0
BYDH3_k127_4818418_0 TIGRFAM competence protein ComEA helix-hairpin-helix repeat region K06959 - - 5.576e-222 697.0
BYDH3_k127_4818418_1 Beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001315 556.0
BYDH3_k127_4818418_2 Domain of Unknown Function (DUF1080) - - - 0.000000000000000000000000000000000000000000000000000005011 194.0
BYDH3_k127_4818418_3 TIGRFAM competence protein ComEA helix-hairpin-helix repeat region K06959 - - 0.0000000000000000000000000000000000002452 143.0
BYDH3_k127_4818418_4 Tex-like protein N-terminal domain K06959 - - 0.000000101 54.0
BYDH3_k127_4833028_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296,K18138 - - 0.0 1325.0
BYDH3_k127_4833028_1 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006376 515.0
BYDH3_k127_4833028_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006657 341.0
BYDH3_k127_4833028_3 Outer membrane efflux protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008682 329.0
BYDH3_k127_4833028_4 Bacterial regulatory proteins, lacI family K02529 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003386 280.0
BYDH3_k127_4833028_5 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 GO:0003674,GO:0003824,GO:0004140,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.1.24 0.0000000000000000000000000000000000000000000000000000000000007951 215.0
BYDH3_k127_4833028_6 Oxidoreductase family, C-terminal alpha/beta domain - - - 0.00000000000000000000000000000000000000000000000000001293 191.0
BYDH3_k127_4833028_7 YbbR-like protein - - - 0.000000000000000000000000000000000000000003138 167.0
BYDH3_k127_4833028_8 Preprotein translocase subunit YajC K03210 - - 0.0002425 44.0
BYDH3_k127_486575_0 Hydantoinase/oxoprolinase K01469,K01473 - 3.5.2.14,3.5.2.9 0.0 1282.0
BYDH3_k127_486575_1 Outer membrane protein assembly complex, YaeT protein K07277 - - 0.0 1109.0
BYDH3_k127_486575_2 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 GO:0002094,GO:0003674,GO:0003824,GO:0004659,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006066,GO:0006629,GO:0006720,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016093,GO:0016094,GO:0016740,GO:0016765,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046165,GO:0071704,GO:1901576,GO:1901615,GO:1901617 2.5.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004783 349.0
BYDH3_k127_486575_3 Outer membrane protein beta-barrel domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000008898 260.0
BYDH3_k127_486575_5 long-chain fatty acid transport protein - - - 0.0000000000000000000000000000000000000000000000000245 184.0
BYDH3_k127_486575_6 PFAM Outer membrane protein (OmpH-like) K06142 - - 0.00000000000000000000000000000000000000000001077 168.0
BYDH3_k127_4868540_0 B-1 B cell differentiation K03634,K14166 - - 0.0000000000000000000000000000000000000000000000000009749 207.0
BYDH3_k127_4868540_1 COG1670 acetyltransferases, including N-acetylases of ribosomal proteins - - - 0.0000000000000000000000000000000000000000000000000105 181.0
BYDH3_k127_4868540_2 lactoylglutathione lyase activity K07032 - - 0.00000000000000000000000000000000000000000000003462 173.0
BYDH3_k127_4868540_3 Protein of unknown function (DUF2911) - - - 0.0000000000000000000000000551 125.0
BYDH3_k127_4868540_4 Domain of unknown function (DU1801) - - - 0.000005658 49.0
BYDH3_k127_4903784_0 PFAM FAD dependent oxidoreductase K15736 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001452 604.0
BYDH3_k127_4903784_1 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002646 272.0
BYDH3_k127_4903784_2 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304,K12267 - 1.8.4.11,1.8.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000001766 262.0
BYDH3_k127_4903784_3 peptide methionine sulfoxide reductase K07305 - 1.8.4.12 0.0000000000000000000000000000000000000000000000000000000000000001477 226.0
BYDH3_k127_4903784_4 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000000000000000000000000000000000000000004021 190.0
BYDH3_k127_4903784_5 enterobactin catabolic process K07214 - - 0.000000000000000000000000007948 113.0
BYDH3_k127_4933997_0 Sortilin, neurotensin receptor 3, - - - 0.0 1329.0
BYDH3_k127_4933997_1 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000189 256.0
BYDH3_k127_4962246_0 COG0507 ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member - - - 1.249e-200 646.0
BYDH3_k127_497964_0 gtp-binding protein typa K06207 - - 2.914e-261 813.0
BYDH3_k127_497964_1 Catalyzes the synthesis of GMP from XMP K01951 GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.5.2 4.473e-259 807.0
BYDH3_k127_497964_10 PFAM Receptor family ligand binding region - - - 0.0000000000000000000000004361 108.0
BYDH3_k127_497964_12 TPR repeat - - - 0.00000000005888 72.0
BYDH3_k127_497964_14 - - - - 0.00002984 52.0
BYDH3_k127_497964_2 PFAM Amidohydrolase family K01468 - 3.5.2.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001999 524.0
BYDH3_k127_497964_4 Organic solvent ABC transporter ATP-binding protein K02065 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002031 311.0
BYDH3_k127_497964_5 PFAM Receptor family ligand binding region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002735 319.0
BYDH3_k127_497964_6 COG1463 ABC-type transport system involved in resistance to organic solvents periplasmic component K02067 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009068 283.0
BYDH3_k127_497964_7 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis K00759 - 2.4.2.7 0.00000000000000000000000000000000000000000000000000004247 192.0
BYDH3_k127_497964_8 Peptidase S16, lon domain protein K01338,K07157 - 3.4.21.53 0.0000000000000000000000000000000000000000598 156.0
BYDH3_k127_497964_9 GTP-binding protein TypA K06207 - - 0.00000000000000000000000004563 108.0
BYDH3_k127_4984425_0 Evidence 4 Homologs of previously reported genes of - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005804 462.0
BYDH3_k127_4984425_1 ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity K06048 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001917 383.0
BYDH3_k127_4984425_2 GMP synthase-glutamine amidotransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008911 326.0
BYDH3_k127_4984425_3 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0016740,GO:0016741,GO:0032259,GO:0044424,GO:0044444,GO:0044464 2.1.1.297 0.000000000000000000000000000000006669 130.0
BYDH3_k127_4984425_4 thiamine pyrophosphokinase K00949 - 2.7.6.2 0.0000000000000000000000000004711 120.0
BYDH3_k127_5005467_0 PFAM Sodium sulfate symporter transmembrane region K14445 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009201 479.0
BYDH3_k127_5005467_1 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.00000000000000000000000000000000000000000000000000000000001961 211.0
BYDH3_k127_5005467_2 - - - - 0.00000000000000000000000000000001957 130.0
BYDH3_k127_5005467_3 PFAM RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) - - - 0.00000000000000000000000000001365 120.0
BYDH3_k127_5005467_4 May be involved in recombinational repair of damaged DNA K03631 - - 0.00000000000000000000000003013 109.0
BYDH3_k127_5031222_0 PFAM Aminotransferase class I and II K00639 - 2.3.1.29 5.882e-207 651.0
BYDH3_k127_5031222_1 PFAM Carbamoyl-phosphate synthase L chain, ATP binding K01961,K01965 - 6.3.4.14,6.4.1.2,6.4.1.3 0.00000000000000000000000000000000000000000000000000000000000000007231 224.0
BYDH3_k127_5031222_2 histone H1-like protein - - - 0.00000000000000000000007405 99.0
BYDH3_k127_5031222_3 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.00000003469 55.0
BYDH3_k127_5047198_0 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle K01595 - 4.1.1.31 7.71e-321 1003.0
BYDH3_k127_5047198_1 Belongs to the glycosyl hydrolase 2 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002768 595.0
BYDH3_k127_5047198_10 DsrE/DsrF/DrsH-like family - - - 0.0000000000000000000000000000000000000000000000000000000002987 207.0
BYDH3_k127_5047198_12 DsrC like protein K11179 - - 0.000000000000000000000000000000007608 130.0
BYDH3_k127_5047198_2 Pyridine nucleotide-disulphide oxidoreductase K17218 - 1.8.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002476 562.0
BYDH3_k127_5047198_3 Ribose-phosphate pyrophosphokinase K00948 - 2.7.6.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003826 502.0
BYDH3_k127_5047198_4 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003619 454.0
BYDH3_k127_5047198_5 Carbon-nitrogen hydrolase K01501 - 3.5.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001039 395.0
BYDH3_k127_5047198_6 NIPSNAP - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002276 295.0
BYDH3_k127_5047198_7 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 GO:0003674,GO:0003824,GO:0004045,GO:0016787,GO:0016788,GO:0052689,GO:0140098,GO:0140101 3.1.1.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004945 287.0
BYDH3_k127_5047198_8 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000003053 235.0
BYDH3_k127_5047198_9 PFAM Rhomboid family - - - 0.00000000000000000000000000000000000000000000000000000000000000003958 229.0
BYDH3_k127_5063974_0 CHAT domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000922 619.0
BYDH3_k127_5063974_1 amine dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007218 446.0
BYDH3_k127_5063974_2 TIGRFAM Bacteroidetes-specific - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000129 331.0
BYDH3_k127_5063974_3 cellular localization - GO:0000003,GO:0000578,GO:0003002,GO:0003006,GO:0003674,GO:0003774,GO:0003777,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005856,GO:0005871,GO:0005875,GO:0006403,GO:0006810,GO:0006886,GO:0006928,GO:0007017,GO:0007018,GO:0007028,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007308,GO:0007309,GO:0007314,GO:0007315,GO:0007316,GO:0007350,GO:0007351,GO:0007389,GO:0008104,GO:0008150,GO:0008298,GO:0008358,GO:0008595,GO:0009790,GO:0009798,GO:0009880,GO:0009948,GO:0009952,GO:0009987,GO:0009994,GO:0012506,GO:0015031,GO:0015630,GO:0015833,GO:0016020,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0019094,GO:0019953,GO:0021700,GO:0022412,GO:0022414,GO:0022607,GO:0030154,GO:0030659,GO:0031090,GO:0031410,GO:0031982,GO:0032501,GO:0032502,GO:0032504,GO:0032879,GO:0032886,GO:0032991,GO:0033036,GO:0034613,GO:0035282,GO:0042886,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0044085,GO:0044422,GO:0044424,GO:0044430,GO:0044433,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0045184,GO:0045451,GO:0046907,GO:0048468,GO:0048469,GO:0048477,GO:0048599,GO:0048609,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0051179,GO:0051234,GO:0051270,GO:0051641,GO:0051649,GO:0051704,GO:0060632,GO:0060810,GO:0060811,GO:0065007,GO:0070727,GO:0071702,GO:0071705,GO:0071840,GO:0097708 - 0.00007976 50.0
BYDH3_k127_5082029_0 cellulose binding - - - 0.0 1014.0
BYDH3_k127_5082029_1 FtsX-like permease family - - - 4.637e-269 850.0
BYDH3_k127_5082029_2 MacB-like periplasmic core domain - - - 2.557e-241 769.0
BYDH3_k127_5082029_3 ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003637 389.0
BYDH3_k127_5097476_0 PFAM Succinylglutamate desuccinylase Aspartoacylase family K06987 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002485 434.0
BYDH3_k127_5097476_1 Belongs to the RimK family K05844 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000806 418.0
BYDH3_k127_5097476_2 OsmC-like protein - - - 0.00000000000000000000000000000000000000000000000000000000000003654 217.0
BYDH3_k127_5097476_3 Protein of unknown function (DUF2911) - - - 0.000000000000000000000000000000000000000000000000000000459 198.0
BYDH3_k127_5097476_4 Rhodanese Homology Domain - - - 0.000000000000000000000000000000000000000000413 159.0
BYDH3_k127_5097476_5 Putative ATP-dependant zinc protease - - - 0.000000000000000000000000000000000000000002719 159.0
BYDH3_k127_5097476_6 Belongs to the thioredoxin family K03671 - - 0.0000000000000000000000000000000000001463 143.0
BYDH3_k127_5097476_7 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS - - - 0.000000000000000000001808 94.0
BYDH3_k127_5097476_8 PFAM Rhodanese-like domain - - - 0.0000000000000000287 81.0
BYDH3_k127_5097476_9 PFAM Rhodanese-like domain - - - 0.00000000001203 65.0
BYDH3_k127_5116429_0 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.000000000000000000000000000000000000000000000000000000000000000000000000002456 255.0
BYDH3_k127_5116429_1 Sigma-70, region 4 K03088 - - 0.000000000000000000000000000000000000000000000000001482 186.0
BYDH3_k127_5116429_2 Fibrillarin - - - 0.000000000000000000000000000000000000000000000001847 181.0
BYDH3_k127_5116429_3 - - - - 0.000000000000000004877 87.0
BYDH3_k127_5116429_4 His Kinase A (phosphoacceptor) domain - - - 0.00000000003634 68.0
BYDH3_k127_5116743_0 PFAM M42 glutamyl aminopeptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001395 573.0
BYDH3_k127_5116743_1 Penicillin amidase K01434 - 3.5.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001016 538.0
BYDH3_k127_5116743_2 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008473 424.0
BYDH3_k127_5116743_3 Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide K08641 - 3.4.13.22 0.000000000000000000000000000000000000000000000000000000000000000000006531 240.0
BYDH3_k127_5124243_0 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 GO:0003674,GO:0003824,GO:0004478,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016740,GO:0016765,GO:0044424,GO:0044444,GO:0044464 2.5.1.6 3.893e-220 687.0
BYDH3_k127_5124243_1 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001039 603.0
BYDH3_k127_5124243_2 TIGRFAM flavoprotein, HI0933 family K07007 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007777 458.0
BYDH3_k127_5124243_3 PFAM alpha beta hydrolase fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001033 294.0
BYDH3_k127_5124243_4 PFAM Tetrapyrrole (Corrin Porphyrin) Methylases K07056 - 2.1.1.198 0.000000000000000000000000000000000000000000000000000000000000000000000000006579 258.0
BYDH3_k127_5124243_5 Belongs to the 'phage' integrase family K03733 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001637 248.0
BYDH3_k127_5124243_6 PFAM Sigma 54 modulation protein S30EA ribosomal protein K05808 - - 0.00000000000000000000000000000000000000000004376 162.0
BYDH3_k127_5140709_0 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002614 378.0
BYDH3_k127_5140709_1 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 - 5.4.99.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008435 346.0
BYDH3_k127_5140709_2 Protein of unknown function (DUF3089) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007133 314.0
BYDH3_k127_5140709_3 Putative esterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000565 261.0
BYDH3_k127_5140709_4 Protein of unknown function (DUF3089) - - - 0.00000000000000000000492 93.0
BYDH3_k127_5146304_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002319 332.0
BYDH3_k127_5146304_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001303 249.0
BYDH3_k127_5146304_2 - - - - 0.000000000000000000000000000000000001114 144.0
BYDH3_k127_5146304_3 - - - - 0.000000000000000000000000001264 120.0
BYDH3_k127_5146304_4 - - - - 0.0000000000000000000001682 101.0
BYDH3_k127_5163059_0 Peptidase S8 and S53 subtilisin kexin sedolisin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001986 396.0
BYDH3_k127_5163059_1 - - - - 0.000000000000000000000000000000000000000003671 163.0
BYDH3_k127_5163059_2 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.0000000000000003099 79.0
BYDH3_k127_5198270_0 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.00000000000000000000000000000000000000000000000000000000003124 210.0
BYDH3_k127_5198270_1 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000005008 150.0
BYDH3_k127_5198270_2 - - - - 0.000000006103 63.0
BYDH3_k127_5201396_0 PFAM Stage II sporulation protein E (SpoIIE) K07315 - 3.1.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002531 569.0
BYDH3_k127_5201396_1 TIGRFAM L-asparaginases, type I K01424 - 3.5.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008825 446.0
BYDH3_k127_5201396_2 TIGRFAM hydrolase, TatD family K03424 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002584 373.0
BYDH3_k127_5201396_3 PFAM Polysaccharide deacetylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001512 244.0
BYDH3_k127_5201396_4 glycosyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000428 230.0
BYDH3_k127_5201396_5 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000003383 137.0
BYDH3_k127_5201396_6 Endonuclease containing a URI domain K07461 - - 0.000000000000000009336 88.0
BYDH3_k127_5201396_7 Recombinase zinc beta ribbon domain K06400 - - 0.0000000003071 61.0
BYDH3_k127_5213698_0 beta-1,4-mannooligosaccharide phosphorylase K21065 - 3.2.1.197 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001894 469.0
BYDH3_k127_5213698_1 domain, Protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001075 338.0
BYDH3_k127_5213698_2 PFAM NAD dependent epimerase dehydratase family K07071 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002634 327.0
BYDH3_k127_5213698_3 Belongs to the LOG family K06966 - 3.2.2.10 0.00000000000000000000000000000000000000000000000000000000009599 205.0
BYDH3_k127_5213698_4 - - - - 0.0000000000000000000000000000000000003958 146.0
BYDH3_k127_5213698_5 Belongs to the LOG family K06966 - 3.2.2.10 0.000000000000000000001899 94.0
BYDH3_k127_5231792_0 Peptidase S8 and S53 subtilisin kexin sedolisin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003795 613.0
BYDH3_k127_5231792_1 C-terminal domain of CHU protein family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004131 601.0
BYDH3_k127_5231792_2 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 - 2.1.1.190 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005643 372.0
BYDH3_k127_5231792_3 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000006031 189.0
BYDH3_k127_5231792_4 Sh3 type 3 domain protein - - - 0.00000000000000000000000000000000000000000000005994 177.0
BYDH3_k127_5231792_5 - - - - 0.0000000000000001035 85.0
BYDH3_k127_5231792_6 - - - - 0.00000294 51.0
BYDH3_k127_5256462_0 Peptidase family M48 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004979 352.0
BYDH3_k127_5256462_1 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.000000000000000000000000000000000000000000000000000000002861 203.0
BYDH3_k127_5256462_2 - - - - 0.0000000000000000000000000000000000000000000004038 171.0
BYDH3_k127_5256462_3 conserved protein (DUF2132) - - - 0.000000000000000000000000000001848 121.0
BYDH3_k127_5256462_4 Domain of unknown function (DUF202) K00389 - - 0.0000008879 56.0
BYDH3_k127_5256462_5 CHAD domain - - - 0.000006755 55.0
BYDH3_k127_5276382_0 PFAM PspC domain K03973 - - 8.855e-229 733.0
BYDH3_k127_5276382_1 Transcriptional regulator K10947 - - 0.00000000000000000000000000000000000000000000000002775 181.0
BYDH3_k127_5276382_2 Peptidase family C25 - - - 0.000009229 49.0
BYDH3_k127_5313814_0 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006864 549.0
BYDH3_k127_5313814_1 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005951 370.0
BYDH3_k127_5313814_2 Domain of unknown function K01126 - 3.1.4.46 0.00000000000000000000000000000000000000000000006214 179.0
BYDH3_k127_5322894_0 Sortilin, neurotensin receptor 3, - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006879 267.0
BYDH3_k127_5322894_1 Peptidyl-prolyl cis-trans isomerase - - - 0.0000000000000000001232 99.0
BYDH3_k127_5322894_2 Universal stress protein - - - 0.000002772 51.0
BYDH3_k127_5341843_0 Peptidase dimerisation domain K12941 - - 8.224e-224 702.0
BYDH3_k127_5341843_1 Catalyzes the formation of L-homocysteine from O- succinyl-L-homoserine (OSHS) and hydrogen sulfide K01739,K01760 - 2.5.1.48,4.4.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002298 495.0
BYDH3_k127_5341843_11 phosphorelay signal transduction system - - - 0.0000000000000000000000000711 111.0
BYDH3_k127_5341843_13 - - - - 0.00000000000000000009223 96.0
BYDH3_k127_5341843_2 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000189 438.0
BYDH3_k127_5341843_3 Two component regulator three Y - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004955 313.0
BYDH3_k127_5341843_4 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase K03772,K03773 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000003822 264.0
BYDH3_k127_5341843_5 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006142 255.0
BYDH3_k127_5341843_6 Transcriptional regulator, Crp Fnr family - - - 0.000000000000000000000000000000000000000000000000000000000000000004377 231.0
BYDH3_k127_5341843_7 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000000000000000000000000001017 228.0
BYDH3_k127_5341843_8 Predicted membrane protein (DUF2306) - - - 0.0000000000000000000000000000000000000000000000000000000000000001736 226.0
BYDH3_k127_5341843_9 RF-1 domain K15034 - - 0.000000000000000000000000000002072 124.0
BYDH3_k127_534778_0 Transporter K03292 - - 3.938e-284 882.0
BYDH3_k127_534778_1 Glycosyl hydrolases family 17 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007587 363.0
BYDH3_k127_534778_2 Glycosyl hydrolases family 17 - - - 0.00000000000000000000000000001014 119.0
BYDH3_k127_5354626_0 signal transduction histidine kinase - - - 1.051e-210 676.0
BYDH3_k127_5354626_1 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004856 555.0
BYDH3_k127_5354626_2 FIST_C - - - 0.0000000000000000000000000000000000000001188 154.0
BYDH3_k127_5365763_0 Belongs to the DEAD box helicase family K11927 - 3.6.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003381 591.0
BYDH3_k127_5365763_1 esterase of the alpha-beta hydrolase superfamily K07001 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004091 372.0
BYDH3_k127_5365763_2 TIGRFAM phosphoesterase, MJ0936 family K07095 - - 0.000000000000000000000000000000000000000000000000000000000000000000003457 238.0
BYDH3_k127_5365763_3 Protein of unknown function (DUF433) - - - 0.0000000000000000000000000434 109.0
BYDH3_k127_5365763_4 - - - - 0.000000000000000009336 88.0
BYDH3_k127_5387886_0 Belongs to the pirin family K06911 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009911 390.0
BYDH3_k127_5387886_1 ubiE/COQ5 methyltransferase family K15256 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004607 299.0
BYDH3_k127_5387886_2 Rossmann-like domain K06988 - 1.5.1.40 0.0000000000000000000000000000000000000000000000000000000000000000003108 235.0
BYDH3_k127_5387886_3 Response regulator, receiver - - - 0.000000000000000000000002662 106.0
BYDH3_k127_5411845_0 Surface antigen - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009331 578.0
BYDH3_k127_5411845_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000505 383.0
BYDH3_k127_5411845_3 Uncharacterized protein conserved in bacteria (DUF2252) - - - 0.000000000000000000000003595 103.0
BYDH3_k127_5420649_0 PFAM Peptidase family M20 M25 M40 K01436 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001913 580.0
BYDH3_k127_5420649_1 PFAM Peptidase family M20 M25 M40 K01436 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001886 484.0
BYDH3_k127_5420649_2 Predicted membrane protein (DUF2157) - - - 0.000000000000000000000000000000000000000000000000000367 196.0
BYDH3_k127_5420649_3 - - - - 0.000000000000000000000000000000000000000000111 174.0
BYDH3_k127_5420649_4 - - - - 0.000000000001289 68.0
BYDH3_k127_5459827_0 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. The first step is catalyzed by NqrF, which accepts electrons from NADH and reduces ubiquinone-1 to ubisemiquinone by a one-electron transfer pathway K00351 - 1.6.5.8 7.973e-245 760.0
BYDH3_k127_5459827_1 Belongs to the arginase family K01479 - 3.5.3.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006265 593.0
BYDH3_k127_5459827_2 Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine K00641 - 2.3.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003725 432.0
BYDH3_k127_5459827_3 homoserine dehydrogenase K00003 - 1.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008528 433.0
BYDH3_k127_5459827_4 PFAM Cys Met metabolism PLP-dependent enzyme K01740 - 2.5.1.49 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001102 414.0
BYDH3_k127_5459827_5 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000007142 244.0
BYDH3_k127_5459827_6 PFAM Cys Met metabolism PLP-dependent enzyme K01740 - 2.5.1.49 0.00000000000000000000000000000000000000000000000002521 179.0
BYDH3_k127_5459827_7 PFAM natural resistance-associated macrophage protein - - - 0.0000000000000000000000000002056 120.0
BYDH3_k127_5469353_0 Sulfatase K01130 - 3.1.6.1 0.0 1212.0
BYDH3_k127_5469353_1 Uncharacterized protein conserved in bacteria (DUF2252) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002444 575.0
BYDH3_k127_5469353_2 hyperosmotic response - - - 0.00000000000000000002275 99.0
BYDH3_k127_5469353_3 - - - - 0.00000000002629 70.0
BYDH3_k127_5499050_0 ABC transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000115 381.0
BYDH3_k127_5499050_1 Outer membrane efflux protein K12340 - - 0.0000000000000000000000000000000000000000000000001317 188.0
BYDH3_k127_5499050_2 Putative lumazine-binding - - - 0.000000000000000000000000000000000000000005954 159.0
BYDH3_k127_5499050_3 OmpA family - - - 0.0000000000000000000000000004898 117.0
BYDH3_k127_5499050_4 PFAM Signal transduction histidine kinase, internal region - - - 0.0000000000000000000002232 109.0
BYDH3_k127_5506247_0 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 0.0 1064.0
BYDH3_k127_5506247_1 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003655 527.0
BYDH3_k127_5506247_2 Permease YjgP YjgQ family K07091 - - 0.000000000000000000000000000000000000004409 154.0
BYDH3_k127_5506247_3 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000005871 135.0
BYDH3_k127_5506247_4 Permease YjgP YjgQ family K07091 - - 0.0000000203 56.0
BYDH3_k127_5544080_0 Xylose isomerase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002842 383.0
BYDH3_k127_5544080_1 Thioesterase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001284 282.0
BYDH3_k127_5544080_2 Glycosyl hydrolase family 20, catalytic domain K12373 - 3.2.1.52 0.000000000000000000000000000000000000000000000000000000000000000000000225 246.0
BYDH3_k127_5544080_3 methyltransferase - - - 0.00000000000000000000000000000000000000000008012 169.0
BYDH3_k127_556077_0 Oxidoreductase - - - 8.138e-230 721.0
BYDH3_k127_556077_1 transport protein K03284 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003136 359.0
BYDH3_k127_556077_2 PFAM TonB-dependent Receptor Plug Domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000005475 238.0
BYDH3_k127_556077_3 Uncharacterized protein conserved in bacteria (DUF2141) - - - 0.000000000000000216 86.0
BYDH3_k127_556077_5 Domain of unknown function (DUF4421) - - - 0.000000000007917 76.0
BYDH3_k127_5579099_0 PFAM Prolyl oligopeptidase, N-terminal beta-propeller domain K01354 - 3.4.21.83 1.65e-302 943.0
BYDH3_k127_5579099_1 Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor K00226,K00254 - 1.3.5.2,1.3.98.1 0.000000000000000000000000000003082 121.0
BYDH3_k127_5579099_2 Psort location Extracellular, score 9.64 - - - 0.00000000000000000005072 95.0
BYDH3_k127_5579099_3 COG3209 Rhs family protein K20276 - - 0.0000000004608 65.0
BYDH3_k127_5586635_0 Pirin C-terminal cupin domain K06911 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008544 388.0
BYDH3_k127_5586635_1 PFAM type I phosphodiesterase nucleotide pyrophosphatase K01113 - 3.1.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007911 341.0
BYDH3_k127_5586635_2 Divergent 4Fe-4S mono-cluster - - - 0.00000000000000000000000000000000000000000000000000000000000002183 216.0
BYDH3_k127_5586635_3 Cupin superfamily (DUF985) K09705 - - 0.00000000000000000000000000000000000000000000000003556 183.0
BYDH3_k127_5586635_4 Nitroreductase family - - - 0.000000000000000000000000000000000000000000000003118 179.0
BYDH3_k127_5586635_5 redox protein regulator of disulfide bond formation K07397 - - 0.00000000000000000000000000000000002467 138.0
BYDH3_k127_5586635_6 Response regulator, receiver - - - 0.000000000000000000000000002829 113.0
BYDH3_k127_5599231_0 Peptidase family M1 domain K01256 - 3.4.11.2 1.466e-205 648.0
BYDH3_k127_5599231_1 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000007081 254.0
BYDH3_k127_5599231_2 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000001868 248.0
BYDH3_k127_5613462_0 Serine aminopeptidase, S33 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007391 361.0
BYDH3_k127_5613462_1 Belongs to the UPF0312 family - - - 0.00000000000000000000000000000000000000000000000000000000000000001801 228.0
BYDH3_k127_5613462_2 Putative zinc- or iron-chelating domain K06940 - - 0.00000000000000000000000000000000000000000000000000000000000007874 214.0
BYDH3_k127_5613462_3 NAD(P)H-binding - - - 0.00000000000000000000000000000000000000000000000000001263 195.0
BYDH3_k127_5613462_4 Cyclic nucleotide-binding domain - - - 0.0000000000000000000000000000000000000000000000001036 184.0
BYDH3_k127_5651862_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001316 522.0
BYDH3_k127_5651862_1 Domain of unknown function (DUF3127) - - - 0.00000000000000000000000000000000000005573 145.0
BYDH3_k127_5663197_0 Sodium/calcium exchanger protein K07301 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006223 278.0
BYDH3_k127_5663197_1 UspA domain-containing protein - - - 0.0000000000000000000000000008018 115.0
BYDH3_k127_5663197_2 Cation transporter/ATPase, N-terminus K01537 - 3.6.3.8 0.00000000000000000000007265 103.0
BYDH3_k127_5691428_0 PFAM Transketolase, C-terminal domain K00615 - 2.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001419 518.0
BYDH3_k127_5691428_1 alcohol dehydrogenase K13979 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000156 334.0
BYDH3_k127_5691428_2 COGs COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001068 340.0
BYDH3_k127_5691428_3 - - - - 0.000000000000000000000002127 112.0
BYDH3_k127_5691428_4 YtxH-like protein - - - 0.00002208 49.0
BYDH3_k127_572748_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007376 267.0
BYDH3_k127_572748_2 PFAM Cupin 2, conserved barrel - - - 0.0000000000001123 74.0
BYDH3_k127_573422_0 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001108 385.0
BYDH3_k127_573422_1 PFAM CBS domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002401 270.0
BYDH3_k127_573422_2 long-chain fatty acid transport protein - - - 0.000000000000000000000000000000000000000000000000000000000000001064 225.0
BYDH3_k127_573422_3 alpha/beta hydrolase fold - - - 0.000000000000000000000000000000000000000000000000000000004379 199.0
BYDH3_k127_5795216_0 Acetyl-CoA carboxylase carboxyltransferase component (subunits alpha and beta) - - - 9.302e-307 944.0
BYDH3_k127_5795216_1 Transglutaminase-like superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003991 421.0
BYDH3_k127_5795216_2 Mammalian cell entry related domain protein K02067 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001288 314.0
BYDH3_k127_5795216_3 PFAM phospholipase Carboxylesterase - - - 0.0000000000000000000000000000000000000000000001081 173.0
BYDH3_k127_5795216_4 N-acetylmuramoyl-L-alanine amidase K01448 - 3.5.1.28 0.00000000000000000000000000000003394 126.0
BYDH3_k127_5824016_0 Cytochrome c biogenesis protein transmembrane region K04084 - 1.8.1.8 3.578e-287 897.0
BYDH3_k127_5824016_1 PFAM Peptidase family M20 M25 M40 - - - 6.977e-234 730.0
BYDH3_k127_5824016_2 Sugar transport protein K05340 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005756 460.0
BYDH3_k127_5824016_3 Sigma-70, region 4 K03088 - - 0.00000000000000000000000000001618 124.0
BYDH3_k127_5824016_4 - - - - 0.0000000000001621 82.0
BYDH3_k127_5824016_5 Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway K00852 - 2.7.1.15 0.000000000008746 65.0
BYDH3_k127_5933335_0 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002619 557.0
BYDH3_k127_5933335_1 Winged helix DNA-binding domain - - - 0.00000000000000000000000000000000000002829 146.0
BYDH3_k127_5933335_2 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella - - - 0.000000000000000000000000000000000004679 146.0
BYDH3_k127_5933335_3 membrane protein (DUF2306) - - - 0.0000000000000000000000000000000135 132.0
BYDH3_k127_5933335_4 - - - - 0.00000000000000003631 88.0
BYDH3_k127_5933335_5 Psort location CytoplasmicMembrane, score - - - 0.0000000000000001443 82.0
BYDH3_k127_5950192_0 Protein of unknown function (DUF1501) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001876 242.0
BYDH3_k127_5950192_1 COGs COG5616 integral membrane protein - - - 0.00000000000000000000000000000000000000001151 176.0
BYDH3_k127_5950192_2 metallopeptidase activity - - - 0.00002741 48.0
BYDH3_k127_5950192_3 - - - - 0.000179 52.0
BYDH3_k127_6011733_0 Catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis K01687 - 4.2.1.9 2.076e-277 861.0
BYDH3_k127_6011733_1 Acetolactate synthase, large subunit K01652 - 2.2.1.6 2.841e-247 775.0
BYDH3_k127_6011733_2 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005806 582.0
BYDH3_k127_6011733_3 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 - 4.3.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001892 359.0
BYDH3_k127_6011733_4 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.000000000000000000000000000000000000000000000002867 175.0
BYDH3_k127_6022428_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008764 529.0
BYDH3_k127_6022428_1 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003097 497.0
BYDH3_k127_6022428_2 COGs COG1668 ABC-type Na efflux pump permease component K01992 - - 0.000000000000000000000000000000000000000000000000000000000001832 213.0
BYDH3_k127_608569_0 Protein of unknown function (DUF3137) - - - 0.000000000000000000000000000000000000000000000000000000000000001146 230.0
BYDH3_k127_608569_1 - - - - 0.000000000000000000000000000000000000000000000000000000002928 205.0
BYDH3_k127_608569_2 LemA family - - - 0.000000000000000000000000000000000119 135.0
BYDH3_k127_6089761_0 phosphorylase K00691 - 2.4.1.8 0.0 1042.0
BYDH3_k127_6089761_1 Alpha-amylase domain K01182,K05343 - 3.2.1.1,3.2.1.10,5.4.99.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003129 563.0
BYDH3_k127_6089761_2 COGs COG1940 Transcriptional regulator sugar kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001075 405.0
BYDH3_k127_6089761_3 pfkB family carbohydrate kinase K00856 - 2.7.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007295 376.0
BYDH3_k127_6089761_4 Haloacid dehalogenase-like hydrolase K01838 - 5.4.2.6 0.000000000000000000000000000000000000000000000000000000000000000000001173 242.0
BYDH3_k127_6089761_5 Haem-degrading - - - 0.00000000000000000000000001471 113.0
BYDH3_k127_6089761_6 Protein of unknown function (DUF1232) - - - 0.00000000000000000005602 94.0
BYDH3_k127_6091304_0 Penicillin binding protein transpeptidase K05366 - 2.4.1.129,3.4.16.4 0.0 1021.0
BYDH3_k127_6091304_1 Tetratricopeptide repeats - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006407 306.0
BYDH3_k127_6091304_2 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 GO:0005575,GO:0005622,GO:0005623,GO:0006950,GO:0006974,GO:0008150,GO:0009380,GO:0009987,GO:0032991,GO:0033554,GO:0044424,GO:0044464,GO:0050896,GO:0051716,GO:1902494,GO:1905347,GO:1905348,GO:1990391 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001239 291.0
BYDH3_k127_6134578_0 WD40-like Beta Propeller Repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000106 505.0
BYDH3_k127_6134578_1 Belongs to the sodium neurotransmitter symporter (SNF) (TC 2.A.22) family K03308 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006297 497.0
BYDH3_k127_6134578_2 Nicotinate-nucleotide adenylyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000004591 228.0
BYDH3_k127_6134578_3 transferase activity, transferring glycosyl groups K00754 - - 0.00000000000000000000000000000000000000000000000421 180.0
BYDH3_k127_6177470_0 - - - - 0.000000000000000006632 95.0
BYDH3_k127_6185381_0 Alpha amylase, catalytic domain - - - 4.726e-221 700.0
BYDH3_k127_6185381_1 Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1- 4)- glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB K16147 - 2.4.99.16 7.653e-220 697.0
BYDH3_k127_6185381_2 PFAM Alpha amylase, catalytic K01176,K01208 GO:0000272,GO:0000287,GO:0001871,GO:0003674,GO:0003824,GO:0004553,GO:0004556,GO:0005488,GO:0005509,GO:0005575,GO:0005975,GO:0005976,GO:0005982,GO:0005983,GO:0006073,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009251,GO:0009987,GO:0016020,GO:0016052,GO:0016160,GO:0016787,GO:0016798,GO:0019867,GO:0030246,GO:0030247,GO:0043167,GO:0043169,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044247,GO:0044248,GO:0044260,GO:0044262,GO:0044264,GO:0044275,GO:0046872,GO:0071704,GO:1901575,GO:2001070 3.2.1.1,3.2.1.133,3.2.1.135,3.2.1.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001499 610.0
BYDH3_k127_6185381_3 PFAM Na dependent nucleoside transporter K03317 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004263 443.0
BYDH3_k127_6185381_4 Transmembrane family 220, helix - - - 0.0000000000000001633 85.0
BYDH3_k127_6200085_0 Belongs to the alpha-IPM synthase homocitrate synthase family K01649 - 2.3.3.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003214 370.0
BYDH3_k127_6200085_1 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814 - 2.4.1.129 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004324 297.0
BYDH3_k127_6200085_2 6-O-methylguanine DNA methyltransferase, DNA binding domain K10778 - 2.1.1.63 0.00000000000000000000000000000000000000000000000000000000000000000000000000005205 265.0
BYDH3_k127_6200085_3 Thioesterase-like superfamily - - - 0.0000000000000000000000000000000000000000000000003319 179.0
BYDH3_k127_6200085_4 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.0000000000000000002714 93.0
BYDH3_k127_6224236_0 PFAM Transglycosylase SLT domain K08307 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004201 451.0
BYDH3_k127_6224236_1 Bacterial protein of unknown function (DUF853) K06915 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001129 333.0
BYDH3_k127_6224236_2 Protein of unknown function (DUF3078) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006486 332.0
BYDH3_k127_6224236_3 PFAM O-methyltransferase K00588 - 2.1.1.104 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001034 291.0
BYDH3_k127_6224236_4 cheY-homologous receiver domain - - - 0.00000000000000000000000000000000000000000000000000000000000000003272 224.0
BYDH3_k127_6224236_5 PFAM Peptidase M16 inactive domain - - - 0.0000000000000000000000000000000000000000000000003038 179.0
BYDH3_k127_6224236_6 (GNAT) family K22441 - 2.3.1.57 0.00000000000000000000000000000000000212 143.0
BYDH3_k127_6255929_0 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001714 427.0
BYDH3_k127_6255929_1 PFAM SMP-30 Gluconolaconase K01053 - 3.1.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001296 367.0
BYDH3_k127_6255929_2 Beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002907 286.0
BYDH3_k127_6255929_3 Psort location Cytoplasmic, score 8.96 - - - 0.000000000000000000000000000002939 122.0
BYDH3_k127_6255929_4 - - - - 0.000000000000000373 80.0
BYDH3_k127_6278646_0 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K01006 - 2.7.9.1 0.0 1120.0
BYDH3_k127_6278646_1 Concanavalin A-like lectin/glucanases superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001622 263.0
BYDH3_k127_6327541_0 cellulose binding - - - 0.0 1041.0
BYDH3_k127_6327541_1 Peptidase dimerisation domain K12941 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001247 606.0
BYDH3_k127_6327541_2 Aminotransferase class-V - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000123 309.0
BYDH3_k127_6327541_3 Redoxin - - - 0.00000000000000000000000000000000000000000000000000000000000000006832 227.0
BYDH3_k127_6327541_4 Thioredoxin - - - 0.0000000000000000000000000000000000000006874 153.0
BYDH3_k127_6327541_6 - - - - 0.000000000000000000062 93.0
BYDH3_k127_635617_0 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008018 371.0
BYDH3_k127_635617_1 Cation efflux family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002885 287.0
BYDH3_k127_635617_2 Excinuclease ABC subunit B - - - 0.0000000000000000000000000000000000000000000000000000000000000000003074 238.0
BYDH3_k127_635617_3 PFAM PQ loop repeat K15383 - - 0.0000000000000000000000007308 107.0
BYDH3_k127_635617_4 Acetyltransferase (GNAT) domain - - - 0.000000000000000000003367 99.0
BYDH3_k127_6402389_0 Adenylyl- / guanylyl cyclase, catalytic domain - - - 8.518e-209 666.0
BYDH3_k127_6402389_1 PFAM Peptidase M16 inactive domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001538 423.0
BYDH3_k127_6402389_10 Belongs to the SOS response-associated peptidase family - - - 0.0000000000000000000004741 98.0
BYDH3_k127_6402389_12 YHS domain - - - 0.00000000000000000002916 96.0
BYDH3_k127_6402389_13 TIGRFAM TonB-dependent outer membrane receptor, SusC RagA subfamily, signature region - - - 0.000000000000002817 80.0
BYDH3_k127_6402389_14 MacB-like periplasmic core domain - - - 0.0000000000005482 72.0
BYDH3_k127_6402389_2 S1 domain K00243 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006713 353.0
BYDH3_k127_6402389_3 COGs COG4775 Outer membrane protein protective antigen OMA87 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001191 272.0
BYDH3_k127_6402389_4 Redoxin - - - 0.000000000000000000000000000000000000000000000000000000000000002381 223.0
BYDH3_k127_6402389_5 - - - - 0.0000000000000000000000000000000000000000003131 166.0
BYDH3_k127_6402389_6 Belongs to the UPF0312 family - - - 0.00000000000000000000000000000000000002714 151.0
BYDH3_k127_6402389_7 TRAP transporter, solute receptor (TAXI family - - - 0.00000000000000000000000000000000001723 150.0
BYDH3_k127_6402389_8 domain, Protein - - - 0.00000000000000000000001566 105.0
BYDH3_k127_6402389_9 - - - - 0.00000000000000000000006738 104.0
BYDH3_k127_6423554_0 Chitobiase/beta-hexosaminidase C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000962 598.0
BYDH3_k127_6423554_1 Protein of unknown function (DUF1501) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000118 463.0
BYDH3_k127_6423554_2 Protein of unknown function (DUF2867) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007018 433.0
BYDH3_k127_642463_0 PFAM TonB-dependent Receptor Plug - - - 0.0 1523.0
BYDH3_k127_642463_1 Starch-binding associating with outer membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001804 560.0
BYDH3_k127_642463_2 FAD dependent oxidoreductase - - - 0.000000000000000000000001493 104.0
BYDH3_k127_6460933_0 Aminotransferase class-V - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003702 414.0
BYDH3_k127_6460933_1 Rieske [2Fe-2S] domain - - - 0.000000000000000000000000005969 114.0
BYDH3_k127_6460933_2 Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain - - - 0.0000002627 59.0
BYDH3_k127_6466154_0 permease - - - 4.703e-230 737.0
BYDH3_k127_6466154_1 PFAM AIR synthase related protein K01933 - 6.3.3.1 3.888e-195 614.0
BYDH3_k127_6466154_2 PFAM Glucose Sorbosone dehydrogenase K21430 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008241 445.0
BYDH3_k127_6466154_3 Protein of unknown function (DUF2721) - - - 0.0000000000000000000000000000001809 128.0
BYDH3_k127_653653_0 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 GO:0003674,GO:0003824,GO:0003909,GO:0003911,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016874,GO:0016886,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 6.5.1.2 1.522e-280 876.0
BYDH3_k127_653653_1 Belongs to the citrate synthase family K01647 - 2.3.3.1 5.386e-231 719.0
BYDH3_k127_653653_2 PFAM SPFH domain Band 7 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005397 364.0
BYDH3_k127_653653_3 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.00000000000000000000000000000000000000000000000000000000000000000518 232.0
BYDH3_k127_653653_4 Acyl CoA binding protein - - - 0.00000000000000000000000000001911 119.0
BYDH3_k127_653653_5 - - - - 0.00000004247 56.0
BYDH3_k127_6548199_0 2-oxoglutarate dehydrogenase, E1 K00164 - 1.2.4.2 0.0 1426.0
BYDH3_k127_6548199_1 Dihydrolipoyl dehydrogenase K00382 - 1.8.1.4 3.938e-250 777.0
BYDH3_k127_6548199_10 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.000000000000000000000000000000174 131.0
BYDH3_k127_6548199_11 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.0000000000000001748 79.0
BYDH3_k127_6548199_12 TonB-dependent Receptor Plug Domain - - - 0.000000001221 63.0
BYDH3_k127_6548199_13 Virus attachment protein p12 family - - - 0.0000001058 56.0
BYDH3_k127_6548199_2 The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) K00658 - 2.3.1.61 1.467e-198 631.0
BYDH3_k127_6548199_3 Aldolase K11645 - 4.1.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009861 581.0
BYDH3_k127_6548199_4 Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000121 540.0
BYDH3_k127_6548199_5 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000633 414.0
BYDH3_k127_6548199_6 Domain of unknown function (DUF4105) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005366 410.0
BYDH3_k127_6548199_7 Belongs to the RNA methyltransferase TrmD family K00554 GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050518,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.228 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006469 364.0
BYDH3_k127_6548199_8 Belongs to the bacterial ribosomal protein bS16 family K02959 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000001233 216.0
BYDH3_k127_6548199_9 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000000000000000000009363 175.0
BYDH3_k127_6564170_0 Major Facilitator K16211 - - 1.385e-215 676.0
BYDH3_k127_6564170_1 PAP2 superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001896 565.0
BYDH3_k127_6564170_2 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 - 2.7.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006951 477.0
BYDH3_k127_6564170_3 PFAM ASPIC and UnbV - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000697 493.0
BYDH3_k127_6564170_4 Belongs to the MIP aquaporin (TC 1.A.8) family K02440 - - 0.0000000000000000000000000000000000000000000001527 170.0
BYDH3_k127_6564170_5 Belongs to the MIP aquaporin (TC 1.A.8) family K02440 - - 0.0000000000000000000000000000000000000000002486 159.0
BYDH3_k127_6564170_6 - - - - 0.00000000000000000001979 101.0
BYDH3_k127_65875_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001976 456.0
BYDH3_k127_65875_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005396 396.0
BYDH3_k127_65875_2 4Fe-4S ferredoxin iron-sulfur binding domain protein K00338 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000002144 229.0
BYDH3_k127_6603370_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 GO:0003674,GO:0003824,GO:0006082,GO:0006629,GO:0006631,GO:0008150,GO:0008152,GO:0009987,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0032787,GO:0033818,GO:0043436,GO:0044237,GO:0044238,GO:0044255,GO:0044281,GO:0071704 2.3.1.180 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001203 523.0
BYDH3_k127_6603370_1 Belongs to the PdxA family K00097 - 1.1.1.262 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001372 442.0
BYDH3_k127_6603370_2 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009258 317.0
BYDH3_k127_6603370_3 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000002511 236.0
BYDH3_k127_6603370_4 Uncharacterized ACR, COG1399 - - - 0.00000000000000000000000000000000000000009158 156.0
BYDH3_k127_6603370_5 Tellurite resistance protein TerB - - - 0.0000000000000000000000000000000000000001008 154.0
BYDH3_k127_6603370_6 Belongs to the bacterial ribosomal protein bL32 family K02911 - - 0.00000000000000000000000000005127 116.0
BYDH3_k127_664085_0 lysine biosynthetic process via aminoadipic acid - - - 3.153e-288 901.0
BYDH3_k127_664085_1 Belongs to the UPF0312 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000002614 237.0
BYDH3_k127_664085_2 transcriptional regulator - - - 0.0000000000000000000000000000000000000000000003741 171.0
BYDH3_k127_664085_3 PFAM peptidase M3A and M3B thimet oligopeptidase F K08602 - - 0.0000000000002129 70.0
BYDH3_k127_6652253_0 Esterase of the alpha-beta hydrolase superfamily - - - 5.518e-261 824.0
BYDH3_k127_6652253_1 Belongs to the helicase family. UvrD subfamily - - - 9.69e-245 792.0
BYDH3_k127_6652253_2 PFAM D-aminoacylase, C-terminal region K06015 - 3.5.1.81 2.207e-201 642.0
BYDH3_k127_6652253_3 PD-(D/E)XK nuclease superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001282 270.0
BYDH3_k127_6652253_4 potassium uptake protein, TrkH family K03498 - - 0.00000000002507 72.0
BYDH3_k127_6683122_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 3.849e-244 758.0
BYDH3_k127_6683122_1 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.0000000000000000000000000000000000000000000000000000004347 198.0
BYDH3_k127_6683122_2 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.000000000000000000000000000000000000000000000001073 179.0
BYDH3_k127_6683122_3 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.00000000000000000000006356 100.0
BYDH3_k127_6685479_0 ABC transporter transmembrane region K06147,K11085 - - 7.356e-226 715.0
BYDH3_k127_6685479_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000305 269.0
BYDH3_k127_6685479_2 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate K03271 GO:0000271,GO:0003674,GO:0003824,GO:0005975,GO:0005976,GO:0006629,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0008968,GO:0009058,GO:0009059,GO:0009103,GO:0009244,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016853,GO:0016866,GO:0016868,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0046401,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 5.3.1.28 0.00000000000000000000000000000000000000000000000000000000005269 206.0
BYDH3_k127_6719387_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006232 443.0
BYDH3_k127_6719387_1 PFAM YceI-like domain - - - 0.000000000000000000000000000000001325 139.0
BYDH3_k127_6719387_2 YceI-like domain - - - 0.00000000000000000000000000000001342 134.0
BYDH3_k127_6719387_3 signal-transduction protein containing cAMP-binding and CBS domains K07238 - - 0.00002869 48.0
BYDH3_k127_6767652_0 DNA mismatch repair protein MutS - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001094 364.0
BYDH3_k127_6767652_1 PFAM Aminotransferase class I and II K00817 - 2.6.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007227 286.0
BYDH3_k127_6767652_2 GAF domain-containing protein K08968 - 1.8.4.14 0.00000000000000000000000000000000000000000000000000000000000000008155 224.0
BYDH3_k127_6767652_3 - - - - 0.000000000000000000000000000004853 121.0
BYDH3_k127_6784216_0 COGs COG5616 integral membrane protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002742 424.0
BYDH3_k127_6784216_1 Peptidase S8 K01342 - 3.4.21.62 0.000000000000000000000000000000000000000000000000000004008 207.0
BYDH3_k127_6784216_2 - - - - 0.00000001795 57.0
BYDH3_k127_6844726_0 Cys/Met metabolism PLP-dependent enzyme - - - 1.044e-241 756.0
BYDH3_k127_6844726_1 Pfam Amidohydrolase K01465 - 3.5.2.3 3.99e-205 646.0
BYDH3_k127_6844726_2 ASPIC and UnbV - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001003 593.0
BYDH3_k127_6844726_3 Amidohydrolase family K01465 - 3.5.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001854 529.0
BYDH3_k127_6844726_4 outer membrane autotransporter barrel domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001143 286.0
BYDH3_k127_6844726_5 Glucose sorbosone K21430 - - 0.000000001481 62.0
BYDH3_k127_6855319_0 TonB-dependent Receptor Plug - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006536 297.0
BYDH3_k127_6855319_1 PFAM aminotransferase class V - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001003 276.0
BYDH3_k127_6855319_2 Domain of unknown function (DUF4974) - - - 0.00000000000000000000000000000000000000000387 168.0
BYDH3_k127_6855319_3 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000782 142.0
BYDH3_k127_6907905_0 Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly K11942 - 5.4.99.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008116 560.0
BYDH3_k127_6907905_1 Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly K11942 - 5.4.99.13 0.000000000000000000000000000000000000000000000000000000000000000000000001525 246.0
BYDH3_k127_6907905_2 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000002202 259.0
BYDH3_k127_6907905_3 Peptidase S46 - GO:0003674,GO:0003824,GO:0004177,GO:0005488,GO:0005575,GO:0005576,GO:0005623,GO:0006508,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0008238,GO:0008239,GO:0009056,GO:0009279,GO:0009986,GO:0009987,GO:0016020,GO:0016049,GO:0016787,GO:0017171,GO:0019538,GO:0019867,GO:0030154,GO:0030312,GO:0030313,GO:0031975,GO:0032502,GO:0033218,GO:0034641,GO:0040007,GO:0042277,GO:0043170,GO:0043171,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044462,GO:0044464,GO:0048468,GO:0048588,GO:0048589,GO:0048856,GO:0048869,GO:0070011,GO:0071704,GO:0071944,GO:0140096,GO:1901564,GO:1901565,GO:1901575 - 0.0000000000000000000000000000000000000000000000009753 177.0
BYDH3_k127_6907905_4 Lamin Tail Domain - - - 0.000000000000000000000000000000000000000001614 165.0
BYDH3_k127_6907905_5 Protein of unknown function (DUF952) - - - 0.0000000000000000000000137 104.0
BYDH3_k127_6907905_6 Peptidase S46 - GO:0003674,GO:0003824,GO:0004177,GO:0005488,GO:0005575,GO:0005576,GO:0005623,GO:0006508,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0008238,GO:0008239,GO:0009056,GO:0009279,GO:0009986,GO:0009987,GO:0016020,GO:0016049,GO:0016787,GO:0017171,GO:0019538,GO:0019867,GO:0030154,GO:0030312,GO:0030313,GO:0031975,GO:0032502,GO:0033218,GO:0034641,GO:0040007,GO:0042277,GO:0043170,GO:0043171,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044462,GO:0044464,GO:0048468,GO:0048588,GO:0048589,GO:0048856,GO:0048869,GO:0070011,GO:0071704,GO:0071944,GO:0140096,GO:1901564,GO:1901565,GO:1901575 - 0.0000000000000000000009833 96.0
BYDH3_k127_6927272_0 Short-chain dehydrogenase reductase sdr K18333 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006604 387.0
BYDH3_k127_6927272_1 FMN-dependent dehydrogenase K00101 - 1.1.2.3 0.0000000000000000000000000000000000000000000005395 167.0
BYDH3_k127_6927272_2 L-rhamnose mutarotase K03534 - 5.1.3.32 0.000000000000000000000000000000000000000000006124 165.0
BYDH3_k127_6927272_3 COG1131 ABC-type multidrug transport system ATPase component K01990 - - 0.0004391 44.0
BYDH3_k127_6995881_0 DoxX family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001091 456.0
BYDH3_k127_6995881_1 PFAM Outer membrane protein transport protein (OMPP1 FadL TodX) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002157 331.0
BYDH3_k127_6995881_2 Domain of Unknown Function (DUF1599) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000249 280.0
BYDH3_k127_6995881_3 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 - 2.5.1.15 0.0000000000000000000000000000000000000000000007585 170.0
BYDH3_k127_6995881_4 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 GO:0000287,GO:0003674,GO:0003824,GO:0004765,GO:0005488,GO:0006082,GO:0006520,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019438,GO:0019632,GO:0019752,GO:0032787,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046872,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615 2.7.1.71 0.000000000000000000000000000000005099 134.0
BYDH3_k127_6995881_5 - - - - 0.000004863 58.0
BYDH3_k127_7012267_0 FtsX-like permease family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003649 567.0
BYDH3_k127_7012267_1 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000000000003975 170.0
BYDH3_k127_7012267_2 - - - - 0.0000000000000001076 84.0
BYDH3_k127_7014545_0 Glycerol-3-phosphate dehydrogenase K00111 - 1.1.5.3 2.834e-196 626.0
BYDH3_k127_7014545_1 Protein of unknown function (DUF3179) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001321 392.0
BYDH3_k127_7014545_2 Alpha amylase catalytic K01176,K01182 - 3.2.1.1,3.2.1.10 0.0000000000000000000000000000000000000000000001453 172.0
BYDH3_k127_7014545_3 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 - 2.7.1.30 0.000000000000000000000000004619 111.0
BYDH3_k127_7022601_0 Carboxypeptidase regulatory-like domain - - - 0.0 1354.0
BYDH3_k127_7022601_1 PFAM Zinc carboxypeptidase - - - 4.332e-243 765.0
BYDH3_k127_7022601_2 soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein K18691 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001331 515.0
BYDH3_k127_7054510_0 Domain of unknown function (DUF5103) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006684 418.0
BYDH3_k127_7054510_1 PFAM CRISPR associated protein Cas6 K19091 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005178 262.0
BYDH3_k127_7054510_2 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.00000000000000000000000000000000000000000000000000000006564 200.0
BYDH3_k127_7073643_0 TIGRFAM succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 - 1.3.5.1,1.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009939 306.0
BYDH3_k127_7073643_1 LPP20 lipoprotein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000005943 260.0
BYDH3_k127_7073643_2 - - - - 0.000000000000000000000000000000001709 133.0
BYDH3_k127_7073643_3 superoxide dismutase activity - - - 0.0000000000000000000004255 102.0
BYDH3_k127_7093253_0 Isocitrate dehydrogenase K00031,K00052 - 1.1.1.42,1.1.1.85 2.612e-210 655.0
BYDH3_k127_7093253_1 penicillin-binding protein 1C K05367 - 2.4.1.129 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007872 587.0
BYDH3_k127_7093253_2 LysR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008334 490.0
BYDH3_k127_7093253_3 Belongs to the ArsC family - - - 0.0000000000000000000000000000000000000002165 152.0
BYDH3_k127_7119836_0 OmpA family - - - 7.864e-216 688.0
BYDH3_k127_7119836_1 CarboxypepD_reg-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001621 484.0
BYDH3_k127_7119836_2 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005814 354.0
BYDH3_k127_7119836_3 Outer membrane protein beta-barrel domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002302 245.0
BYDH3_k127_7119836_4 Necessary for normal cell division and for the maintenance of normal septation K03978 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000004136 211.0
BYDH3_k127_7119836_5 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) K03183 - 2.1.1.163,2.1.1.201 0.0000000000000000000000000000000000000000000000000000000003673 204.0
BYDH3_k127_7119836_6 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) K03183 - 2.1.1.163,2.1.1.201 0.0000000000000000000000000000000000000000000000005659 176.0
BYDH3_k127_7137299_0 OPT oligopeptide transporter protein - - - 1.867e-301 937.0
BYDH3_k127_7137299_1 Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle K01596 - 4.1.1.32 8.616e-233 725.0
BYDH3_k127_7137299_2 TIGRFAM amino acid peptide transporter (Peptide H symporter), bacterial K03305 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000321 608.0
BYDH3_k127_7180737_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1446.0
BYDH3_k127_7180737_1 PFAM glucose-methanol-choline oxidoreductase - - - 9.685e-252 788.0
BYDH3_k127_7180737_10 PFAM Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000000000000000000000000000000004268 205.0
BYDH3_k127_7180737_11 TIGRFAM RNA polymerase sigma factor, sigma-70 family - - - 0.0000000000000000000000000000000000000000000000000000832 192.0
BYDH3_k127_7180737_12 - - - - 0.0000000000000000000007818 99.0
BYDH3_k127_7180737_13 PFAM Outer membrane efflux protein - - - 0.000005661 52.0
BYDH3_k127_7180737_2 Calcineurin-like phosphoesterase superfamily domain K07098 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001507 548.0
BYDH3_k127_7180737_3 Belongs to the DapA family K01714,K21062 - 3.5.4.22,4.3.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003342 453.0
BYDH3_k127_7180737_4 PFAM Aldehyde dehydrogenase K13877 - 1.2.1.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001429 438.0
BYDH3_k127_7180737_5 PFAM Glyoxalase bleomycin resistance protein dioxygenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001877 349.0
BYDH3_k127_7180737_6 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006437 353.0
BYDH3_k127_7180737_7 PFAM Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002153 337.0
BYDH3_k127_7180737_8 COG2207 AraC-type DNA-binding domain-containing - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000674 304.0
BYDH3_k127_7180737_9 mannose-6-phosphate isomerase - - - 0.000000000000000000000000000000000000000000000000000000002225 201.0
BYDH3_k127_721730_0 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001068 544.0
BYDH3_k127_721730_1 PFAM Phosphate-selective porin O and P - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002618 460.0
BYDH3_k127_721730_2 Isopentenyl-diphosphate delta-isomerase K01823 - 5.3.3.2 0.00000000000000000000000000000000000000000000001759 173.0
BYDH3_k127_7242129_0 acyl-CoA dehydrogenase K00252 - 1.3.8.6 1.56e-241 749.0
BYDH3_k127_7242129_1 MORN repeat variant - - - 1.312e-213 679.0
BYDH3_k127_7242129_2 Belongs to the UDP-N-acetylglucosamine 2-epimerase family K13019 - 5.1.3.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003403 412.0
BYDH3_k127_7242129_3 FAD dependent oxidoreductase K07137 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002566 338.0
BYDH3_k127_7242129_4 Tryptophan 2,3-dioxygenase K00453 - 1.13.11.11 0.00000000000000000000000000000000000000000000000000000000000000000004898 234.0
BYDH3_k127_7242129_5 Tryptophan 2,3-dioxygenase K00453 - 1.13.11.11 0.00000000000000000000000000000000000000000000000000000006411 199.0
BYDH3_k127_7242594_0 PFAM SAICAR synthetase K01923 GO:0003674,GO:0003824,GO:0004639,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008182 467.0
BYDH3_k127_7242594_1 Outer membrane protein protective antigen OMA87 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001018 393.0
BYDH3_k127_7242594_2 Involved in the import of queuosine (Q) precursors, required for Q precursor salvage K09125 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007864 339.0
BYDH3_k127_7242594_3 Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA K00784 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004540,GO:0006139,GO:0006396,GO:0006399,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0031123,GO:0034414,GO:0034470,GO:0034641,GO:0034660,GO:0042779,GO:0042780,GO:0042781,GO:0043170,GO:0043628,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1905267 3.1.26.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004617 327.0
BYDH3_k127_7242594_4 PFAM SpoU rRNA Methylase family K03437 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009085 273.0
BYDH3_k127_7242594_5 Belongs to the anti-sigma-factor antagonist family - - - 0.0000000000000000000000000000000000000000000000000000003484 195.0
BYDH3_k127_7242594_6 MORN repeat variant - - - 0.0001499 45.0
BYDH3_k127_7242889_0 H( )-stimulated, divalent metal cation uptake system K03322 - - 1.104e-243 768.0
BYDH3_k127_7242889_1 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008381 466.0
BYDH3_k127_7242889_2 Iron dependent repressor, metal binding and dimerisation domain K03709 - - 0.0000000000000000000000000000000000000000000000000000694 190.0
BYDH3_k127_7242889_3 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.000000000000000000000000000000000001369 141.0
BYDH3_k127_7279993_0 Outer membrane protein beta-barrel family - - - 4.181e-290 917.0
BYDH3_k127_7279993_1 PFAM Glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003911 380.0
BYDH3_k127_7279993_2 Amidohydrolase family - - - 0.00000000006531 63.0
BYDH3_k127_7279993_3 Protein of unknown function (Porph_ging) - - - 0.0004317 43.0
BYDH3_k127_7280864_0 FtsX-like permease family K02004 - - 1.296e-245 771.0
BYDH3_k127_7280864_1 COG1680 Beta-lactamase class C and other penicillin binding K01286 - 3.4.16.4 0.000000000000000001163 89.0
BYDH3_k127_7280864_2 - - - - 0.000000001443 67.0
BYDH3_k127_7285797_0 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002226 425.0
BYDH3_k127_7285797_1 Belongs to the ABC-4 integral membrane protein family. FtsX subfamily K09811 GO:0005575,GO:0005618,GO:0005623,GO:0006928,GO:0008150,GO:0009274,GO:0009276,GO:0009605,GO:0009607,GO:0009615,GO:0009987,GO:0030312,GO:0030313,GO:0031975,GO:0040011,GO:0043207,GO:0044464,GO:0048870,GO:0050896,GO:0051179,GO:0051301,GO:0051674,GO:0051704,GO:0051707,GO:0071944,GO:0071976 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007111 339.0
BYDH3_k127_7285797_2 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001971 327.0
BYDH3_k127_7285797_3 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016556,GO:0016853,GO:0016866,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1990481 5.4.99.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005182 286.0
BYDH3_k127_7285797_4 Sigma-70 region 2 - - - 0.00000000000000000000000000001421 118.0
BYDH3_k127_7285797_6 Protein of unknown function (DUF3098) - - - 0.000000000000000008443 84.0
BYDH3_k127_7285797_7 3-oxoacid CoA-transferase, a subunit K01027,K01028,K01031,K01034 - 2.8.3.5,2.8.3.6,2.8.3.8,2.8.3.9 0.00000000000005362 72.0
BYDH3_k127_7287239_0 Phosphoesterase family - - - 0.0 1144.0
BYDH3_k127_7287239_1 Phosphoesterase family - - - 0.0 1015.0
BYDH3_k127_7287239_2 TonB dependent receptor K16087 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000384 630.0
BYDH3_k127_7287239_3 Belongs to the alkaline phosphatase family K01077 - 3.1.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005353 415.0
BYDH3_k127_7287239_4 arylsulfatase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001751 400.0
BYDH3_k127_7287239_5 Protein of unknown function (DUF2490) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003466 250.0
BYDH3_k127_7322424_0 - Catabolite gene activator and regulatory subunit of cAMP-dependent protein - - - 1.063e-207 663.0
BYDH3_k127_7322424_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005434 390.0
BYDH3_k127_7325034_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000256 455.0
BYDH3_k127_7325034_1 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001365 263.0
BYDH3_k127_7325034_2 Tetratricopeptide repeat - - - 0.00000000000000000004221 102.0
BYDH3_k127_7332262_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 GO:0003674,GO:0003824,GO:0004812,GO:0004829,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006435,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.3 7.718e-269 832.0
BYDH3_k127_7332262_1 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K03307,K14387 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004298 502.0
BYDH3_k127_7332262_2 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0006996,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016043,GO:0019538,GO:0022411,GO:0032790,GO:0032984,GO:0032988,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903008 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001958 271.0
BYDH3_k127_7332262_3 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015934,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042273,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000005084 196.0
BYDH3_k127_7332262_4 Pkd domain containing protein - - - 0.00000000000000000000000000000000000000000000000003141 189.0
BYDH3_k127_7332262_5 OsmC-like protein K07397 - - 0.0000000000000000000000000000001503 126.0
BYDH3_k127_7332262_6 Belongs to the bacterial ribosomal protein bL35 family K02916 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000006816 87.0
BYDH3_k127_7340893_0 ABC-2 type transporter - - - 0.0 1054.0
BYDH3_k127_7340893_1 Psort location CytoplasmicMembrane, score 10.00 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002594 415.0
BYDH3_k127_7340893_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000349 351.0
BYDH3_k127_7340893_3 cheY-homologous receiver domain - - - 0.00000000000000000000002128 104.0
BYDH3_k127_7372780_0 D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1 K03841 - 3.1.3.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001854 516.0
BYDH3_k127_7372780_1 Belongs to the aspartokinase family K00928 - 2.7.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001524 434.0
BYDH3_k127_7372780_2 - - - - 0.000000000000000000000000000000000000000000000000001293 185.0
BYDH3_k127_7372780_3 Low molecular weight phosphotyrosine protein phosphatase K01104 - 3.1.3.48 0.0000000000000000000000000000000000000000000356 165.0
BYDH3_k127_7372780_4 Belongs to the enoyl-CoA hydratase isomerase family K01692,K01715 - 4.2.1.17 0.000000000000000000000000212 106.0
BYDH3_k127_7372780_5 Necessary for normal cell division and for the maintenance of normal septation K03978 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000008472 55.0
BYDH3_k127_7378275_0 PDZ domain (Also known as DHR or GLGF) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001617 526.0
BYDH3_k127_7378275_1 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K03527 - 1.17.7.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001562 421.0
BYDH3_k127_7378275_2 - - - - 0.0000000000000000000000000000000000000000000000000000129 194.0
BYDH3_k127_7395404_0 Tetratricopeptide repeat protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000167 577.0
BYDH3_k127_7395404_1 PFAM Glycosyl transferase family 2 K07011 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002094 395.0
BYDH3_k127_7395404_2 C-terminal domain of CHU protein family - - - 0.00000000000000000000000000000000000000000000000000000000000000000003817 244.0
BYDH3_k127_7395404_3 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.00000000000000000000000000000000000000006075 153.0
BYDH3_k127_7395404_4 PFAM PspC domain - - - 0.00000000000000000000000005958 108.0
BYDH3_k127_7406160_0 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K03737 - 1.2.7.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007274 521.0
BYDH3_k127_7406160_1 Dihydroorotate dehydrogenase K00226 - 1.3.98.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000423 429.0
BYDH3_k127_7406160_2 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K03737 - 1.2.7.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000922 360.0
BYDH3_k127_7406160_3 Low-potential electron donor to a number of redox enzymes K03839 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001475 242.0
BYDH3_k127_7406160_4 - - - - 0.0006291 42.0
BYDH3_k127_7408463_0 - - - - 0.00000000000000000000003872 106.0
BYDH3_k127_7408463_1 - - - - 0.00000000000000001413 91.0
BYDH3_k127_7408463_2 - - - - 0.0000000000002886 75.0
BYDH3_k127_7408463_3 Hydrolase with alpha beta fold protein K06889 - - 0.0000000000005406 72.0
BYDH3_k127_7409781_0 TonB-dependent receptor K16089 - - 1.447e-292 915.0
BYDH3_k127_7409781_1 PFAM Glycoside hydrolase 97 K01187,K21574 - 3.2.1.20,3.2.1.3 5.107e-291 909.0
BYDH3_k127_7409781_2 PFAM Glycoside hydrolase, family 20, catalytic core K12373 - 3.2.1.52 6.469e-244 780.0
BYDH3_k127_7409781_3 Protein of unknown function (DUF1624) - - - 0.0000000000000000000000000000000000000000000000000003404 185.0
BYDH3_k127_7409781_4 - - - - 0.00000000000000000000000000000000000000000000000003198 185.0
BYDH3_k127_7409781_5 Protein conserved in bacteria - - - 0.00000000000000000000000000000000009584 138.0
BYDH3_k127_7409781_6 Protein conserved in bacteria - - - 0.000000000000002088 76.0
BYDH3_k127_7409781_7 MerC mercury resistance protein - - - 0.0000000001072 67.0
BYDH3_k127_7409781_8 - - - - 0.000000188 58.0
BYDH3_k127_7421351_0 Belongs to the GTP cyclohydrolase I type 2 NIF3 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006297 447.0
BYDH3_k127_7421351_1 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007729 329.0
BYDH3_k127_7421351_2 phosphoglycerate mutase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004816 292.0
BYDH3_k127_7421351_3 TPR repeat-containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009783 284.0
BYDH3_k127_7421351_4 Zn-ribbon protein, possibly nucleic acid-binding K07164 - - 0.000000000000000000000000000000000000000000000000000000000000000001896 231.0
BYDH3_k127_7421351_5 PFAM thioesterase superfamily K19222 - 3.1.2.28 0.000000000000000000000000000000000000000000000000000000001813 203.0
BYDH3_k127_7421351_6 Zn-ribbon protein, possibly nucleic acid-binding K07164 - - 0.000000000000000000000000000176 115.0
BYDH3_k127_7421351_7 PFAM chorismate binding enzyme K02361,K02552 - 5.4.4.2 0.00000004521 61.0
BYDH3_k127_7462301_0 phytoene K10027 - 1.3.99.26,1.3.99.28,1.3.99.29,1.3.99.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004506 392.0
BYDH3_k127_7462301_1 Bestrophin, RFP-TM, chloride channel K08994 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005742 339.0
BYDH3_k127_7462301_2 TonB-dependent Receptor Plug - - - 0.0000000000000000000000000000000000000000000000000000000000000003053 225.0
BYDH3_k127_7462301_3 TonB-dependent Receptor Plug Domain - - - 0.0000000000000000000000000000000000000001732 151.0
BYDH3_k127_7462301_4 - - - - 0.000000000000000000000000000000000003378 143.0
BYDH3_k127_7470413_0 Domain of Unknown Function (DUF1080) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003619 416.0
BYDH3_k127_7470413_1 Calcineurin-like phosphoesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001417 352.0
BYDH3_k127_7470413_2 Oxidoreductase family, NAD-binding Rossmann fold K00118 - 1.1.99.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002557 331.0
BYDH3_k127_7470413_3 Cupin 2, conserved barrel domain protein - - - 0.000000000000000000000000000000000000000000377 158.0
BYDH3_k127_7522484_0 Belongs to the aldehyde dehydrogenase family K00128 - 1.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004358 436.0
BYDH3_k127_7522484_1 PDZ domain (Also known as DHR or GLGF) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006524 344.0
BYDH3_k127_7522484_2 PDZ domain (Also known as DHR or GLGF) - - - 0.000000000000000000000000000000000000000000000001244 180.0
BYDH3_k127_7522484_3 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000003431 79.0
BYDH3_k127_7532910_0 PFAM Phosphorylase superfamily K00757 - 2.4.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008877 302.0
BYDH3_k127_7532910_1 - - - - 0.0000000000000000000000000000000000000003818 154.0
BYDH3_k127_7532910_2 EamA-like transporter family - - - 0.000007049 49.0
BYDH3_k127_7584244_0 Beta-lactamase - - - 1.131e-201 640.0
BYDH3_k127_7584244_1 Planctomycete cytochrome C - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005442 471.0
BYDH3_k127_7593354_0 Outer membrane protein protective antigen OMA87 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002758 598.0
BYDH3_k127_7593354_1 translation initiation factor activity K12573 - - 0.0000000000000000001125 91.0
BYDH3_k127_7605212_0 Isocitrate/isopropylmalate dehydrogenase K00031 - 1.1.1.42 9.554e-215 674.0
BYDH3_k127_7605212_1 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000116 467.0
BYDH3_k127_7605212_2 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 GO:0000906,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.78 0.000000000000000000000000000000000000000000000000000000000002114 212.0
BYDH3_k127_7605212_3 Pyrimidine operon attenuation protein uracil phosphoribosyltransferase K02825 - 2.4.2.9 0.00000000000000000000000000000000000000000000002307 173.0
BYDH3_k127_7605212_4 ParE toxin of type II toxin-antitoxin system, parDE - - - 0.0000000000000004465 81.0
BYDH3_k127_7605212_5 Tetratricopeptide repeat - - - 0.000000000000004509 76.0
BYDH3_k127_7605212_6 - - - - 0.000000008059 60.0
BYDH3_k127_7624587_0 C-terminal domain of CHU protein family - - - 1.232e-257 826.0
BYDH3_k127_7624587_1 Belongs to the GPAT DAPAT family K00631 - 2.3.1.15 5.401e-243 762.0
BYDH3_k127_7624587_2 Acts as a magnesium transporter K06213 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006158 570.0
BYDH3_k127_7624587_3 PFAM NAD-dependent glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001442 449.0
BYDH3_k127_7624587_4 Pentapeptide repeats (9 copies) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002219 435.0
BYDH3_k127_7624587_5 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.00000000000000000000000000000000000000000000000000000000000000001794 226.0
BYDH3_k127_7624587_6 HIT family hydrolase K02503 - - 0.00000000000000000000000000000000000000000000000000000005089 198.0
BYDH3_k127_7624587_7 Protein of unknown function, DUF393 - - - 0.0000000000000000000000000000000000000000000004132 170.0
BYDH3_k127_7624587_8 - - - - 0.0000000000000000000006961 96.0
BYDH3_k127_7667138_0 PFAM Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001549 561.0
BYDH3_k127_7667138_1 Belongs to the glycosyl hydrolase 30 family K01201 - 3.2.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001299 550.0
BYDH3_k127_7667138_2 PFAM ROK family K00845 - 2.7.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001733 299.0
BYDH3_k127_7667138_3 Polyketide cyclase / dehydrase and lipid transport - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002327 253.0
BYDH3_k127_7667138_4 Protein of Unknown function (DUF2784) - - - 0.00000000000000000000000000000000000000000000005609 171.0
BYDH3_k127_7667138_5 - - - - 0.000000000000000000000000000000000002746 142.0
BYDH3_k127_7667138_6 oxidation-reduction process - - - 0.000000000000000000000000000000000003606 141.0
BYDH3_k127_7713955_0 Tetratricopeptide repeat - - - 7.897e-230 725.0
BYDH3_k127_7713955_1 Converts 4-O-beta-D-mannopyranosyl-D-glucopyranose (Man- Glc) to mannose 1-phosphate (Man1P) and glucose K16212 - 2.4.1.281 6.591e-194 609.0
BYDH3_k127_7713955_2 Sodium:solute symporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002797 468.0
BYDH3_k127_7713955_3 Catalyzes the reversible epimerization of cellobiose to 4-O-beta-D-glucopyranosyl-D-mannose (Glc-Man) K16213 - 5.1.3.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000525 441.0
BYDH3_k127_7713955_4 Fatty acid hydroxylase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002954 304.0
BYDH3_k127_7713955_5 isomerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000001744 233.0
BYDH3_k127_7713955_6 OsmC-like protein - - - 0.0000000000000000000000000000000000000000000000000005874 190.0
BYDH3_k127_7798868_0 ABC-type glycine betaine transport system K05845,K05846 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001245 444.0
BYDH3_k127_7798868_1 Phosphotriesterase family K07048 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002446 435.0
BYDH3_k127_7798868_2 Domain of Unknown Function (DUF1080) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004961 306.0
BYDH3_k127_7798868_3 Glycosyl transferase 4-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000006844 225.0
BYDH3_k127_7798868_4 glycine, betaine K05847 - - 0.0000000000000000000000000000000000000000000000000000000000000009154 226.0
BYDH3_k127_7798868_5 - - - - 0.000000000000002081 78.0
BYDH3_k127_7798868_6 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.0005346 44.0
BYDH3_k127_7801808_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001635 542.0
BYDH3_k127_7801808_1 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001327 303.0
BYDH3_k127_7801808_2 Phosphotriesterase family K07048 - - 0.000000000000000000000000000000000000000000000000000000000000000438 222.0
BYDH3_k127_7802014_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.0 1187.0
BYDH3_k127_7802014_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002708 539.0
BYDH3_k127_7802014_2 membrane transporter protein K07090 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001777 327.0
BYDH3_k127_7802014_3 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001354 261.0
BYDH3_k127_7802014_4 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000007865 249.0
BYDH3_k127_7802014_5 Involved in the binding of tRNA to the ribosomes K02946 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000006623 190.0
BYDH3_k127_7802014_6 Protein of unknown function (DUF3467) - - - 0.000000000000000000000000000000000000000000000000001231 184.0
BYDH3_k127_7802014_7 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain K07117 - - 0.00000000000000000000000000000000004222 138.0
BYDH3_k127_7803666_0 Pyridine nucleotide-disulphide oxidoreductase K00384 - 1.8.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000431 466.0
BYDH3_k127_7803666_1 Involved in the tonB-independent uptake of proteins - - - 0.00000000000000000000000000000000000000000000000000000000000005989 223.0
BYDH3_k127_7803666_2 2',5' RNA ligase - - - 0.000000000000000000000000000000000000000000000000000000523 198.0
BYDH3_k127_7803666_3 CarboxypepD_reg-like domain - - - 0.000000000000000000000000000000002336 134.0
BYDH3_k127_7803666_4 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain - - - 0.00001427 56.0
BYDH3_k127_7866058_0 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002909 314.0
BYDH3_k127_7866058_1 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008934 303.0
BYDH3_k127_7866058_2 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002554 271.0
BYDH3_k127_7866058_3 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000003099 216.0
BYDH3_k127_7866058_4 Binds to the 23S rRNA K02876 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000000000000000000001607 182.0
BYDH3_k127_7866058_5 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0008097,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.0000000000000000000000000000000000000001091 153.0
BYDH3_k127_7866058_6 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000005094 141.0
BYDH3_k127_7866058_7 Ribosomal protein L30 K02907 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000002415 86.0
BYDH3_k127_7871792_0 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 3.632e-230 731.0
BYDH3_k127_7871792_1 FAD dependent oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006318 338.0
BYDH3_k127_7871792_2 - - - - 0.000002298 56.0
BYDH3_k127_7871792_3 Protein of unknown function (DUF2490) - - - 0.000002395 51.0
BYDH3_k127_7875693_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.0 1011.0
BYDH3_k127_7875693_1 Arginyl-tRNA synthetase K01887 GO:0003674,GO:0003824,GO:0004812,GO:0004814,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006420,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.19 5.113e-273 851.0
BYDH3_k127_7875693_10 Belongs to the arginase family K01476,K01480 - 3.5.3.1,3.5.3.11 0.00000000000002827 73.0
BYDH3_k127_7875693_11 START domain - - - 0.0000001248 61.0
BYDH3_k127_7875693_2 Deoxyhypusine synthase K00809 - 2.5.1.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000715 566.0
BYDH3_k127_7875693_3 PFAM Pyridoxal-dependent decarboxylase, C-terminal sheet domain K01585 - 4.1.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009134 527.0
BYDH3_k127_7875693_4 Belongs to the arginase family K01476,K01480 - 3.5.3.1,3.5.3.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003063 370.0
BYDH3_k127_7875693_5 PFAM Pyridoxal-dependent decarboxylase, C-terminal sheet domain K01585 - 4.1.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000006122 255.0
BYDH3_k127_7875693_6 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002214 253.0
BYDH3_k127_7875693_7 COGs COG1670 Acetyltransferase including N-acetylase of ribosomal protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001694 242.0
BYDH3_k127_7875693_8 Belongs to the glutathione peroxidase family K00432 - 1.11.1.9 0.00000000000000000000000000000000000000000000000000000000000000114 222.0
BYDH3_k127_7875693_9 Belongs to the glutathione peroxidase family K00432 - 1.11.1.9 0.000000000000000000000000001434 114.0
BYDH3_k127_7900570_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.9 3.371e-219 685.0
BYDH3_k127_7900570_1 fumarylacetoacetate (FAA) hydrolase K01555 - 3.7.1.2 1.278e-216 677.0
BYDH3_k127_7900570_2 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase K00162 - 1.2.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004311 559.0
BYDH3_k127_7900570_3 RNA-binding PUA-like domain of methyltransferase RsmF - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001662 462.0
BYDH3_k127_7900570_4 PFAM Flavin reductase like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000445 368.0
BYDH3_k127_7900570_5 Major facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001081 299.0
BYDH3_k127_7900570_6 Tetratricopeptide repeat protein - - - 0.00000000000000000000000000000004016 129.0
BYDH3_k127_7900570_7 - - - - 0.00000000000000004798 87.0
BYDH3_k127_7906958_0 PFAM GlcNAc-PI de-N-acetylase - - - 3.731e-290 913.0
BYDH3_k127_7906958_1 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family - - - 2.256e-204 650.0
BYDH3_k127_7906958_2 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03767,K03768 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000003569 256.0
BYDH3_k127_7906958_3 Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate K08289 - 2.1.2.2 0.0000000000000000000000000341 109.0
BYDH3_k127_7907973_0 Beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006087 569.0
BYDH3_k127_7907973_1 - - - - 0.000000000000000000000000000000000000000000000000002219 184.0
BYDH3_k127_7907973_2 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.00004587 46.0
BYDH3_k127_7919813_0 Domain of Unknown Function (DUF1080) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001664 414.0
BYDH3_k127_7919813_1 Oxidoreductase family, NAD-binding Rossmann fold K00118 - 1.1.99.28 0.00000000000000000000000000000000000000000000000000000000000008948 215.0
BYDH3_k127_7919813_2 Calcineurin-like phosphoesterase - - - 0.000000000000000000000008034 104.0
BYDH3_k127_7920658_0 Lamin Tail Domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003075 568.0
BYDH3_k127_7920658_1 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001272 511.0
BYDH3_k127_7920658_2 Xylose isomerase-like TIM barrel K03335 - 4.2.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001633 414.0
BYDH3_k127_7920658_3 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007956 342.0
BYDH3_k127_7920658_4 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006253 287.0
BYDH3_k127_7920658_5 PFAM Prokaryotic dksA traR C4-type zinc finger - - - 0.00000000000000000000000000000000000000000000000004585 187.0
BYDH3_k127_7920658_6 LemA family K03744 - - 0.000000000000000000000000000000000008338 143.0
BYDH3_k127_7920658_7 - - - - 0.0000000000000000000000000000003269 129.0
BYDH3_k127_7940951_0 Belongs to the UPF0753 family K09822 - - 1.426e-297 924.0
BYDH3_k127_7940951_1 COG0659 Sulfate permease and related transporters (MFS superfamily) - - - 4.299e-243 771.0
BYDH3_k127_7940951_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004554 550.0
BYDH3_k127_7940951_3 Saccharopine dehydrogenase K00290,K00293 - 1.5.1.10,1.5.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003293 437.0
BYDH3_k127_7940951_4 SBF-like CPA transporter family (DUF4137) K03453 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001306 264.0
BYDH3_k127_7940951_5 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03469 - 3.1.26.4 0.000000000000000000000000000000000000000000000000000000000000000000000000134 250.0
BYDH3_k127_7940951_6 Phosphate acyltransferases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000249 246.0
BYDH3_k127_7940951_7 PFAM MarC family integral membrane protein K05595 - - 0.00000000000000000000000000000000000000000000000000000000000000000002985 237.0
BYDH3_k127_7940951_8 secondary active sulfate transmembrane transporter activity - - - 0.000000000003717 80.0
BYDH3_k127_7956413_0 MFS/sugar transport protein - - - 1.321e-250 782.0
BYDH3_k127_7956413_1 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K00177,K00187 - 1.2.7.3,1.2.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000002582 251.0
BYDH3_k127_7956413_2 oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor K00175,K00187 - 1.2.7.11,1.2.7.3,1.2.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000004821 246.0
BYDH3_k127_7956413_3 Glycosyl hydrolase 36 superfamily, catalytic domain K00702 - 2.4.1.20 0.00000000000000000000000000000000000000000004732 160.0
BYDH3_k127_7972054_0 CarboxypepD_reg-like domain - - - 0.0 1016.0
BYDH3_k127_7972054_1 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 GO:0003674,GO:0003824,GO:0004812,GO:0004829,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006435,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006676 475.0
BYDH3_k127_7972054_2 with different specificities (related to short-chain alcohol - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005396 258.0
BYDH3_k127_7972054_3 Catalyzes the 2'-O methylation of guanosine at position 18 in tRNA K00556 - 2.1.1.34 0.000000000000000000000000000000000000000000000000000000000000000000001041 243.0
BYDH3_k127_7972054_4 DUF218 domain K03748 - - 0.000000000000000000000000000000000000000000000000000000000000000000006817 240.0
BYDH3_k127_7972054_5 Belongs to the ompA family - - - 0.00000000000000000000000000000000000000000003211 169.0
BYDH3_k127_7972054_6 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 GO:0003674,GO:0003824,GO:0004812,GO:0004829,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006435,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.3 0.0000000000000000000000000000000000000000005755 156.0
BYDH3_k127_7972054_7 D-alanyl-D-alanine carboxypeptidase K17733 - - 0.0000000000000223 82.0
BYDH3_k127_7972054_8 SdpI/YhfL protein family - - - 0.00004633 46.0
BYDH3_k127_7976064_0 ABC-2 type transporter K21397 - - 0.0 1367.0
BYDH3_k127_7976064_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005539 396.0
BYDH3_k127_7976064_2 - - - - 0.00000000000000000000000000000000000000000000000000000000101 203.0
BYDH3_k127_7976064_3 PFAM phospholipase Carboxylesterase - - - 0.000000000000000000000000000000000000000000000003571 177.0
BYDH3_k127_7976064_4 cytidine and deoxycytidylate deaminase K01489 - 3.5.4.5 0.0000000000000000000000000000000000000008119 153.0
BYDH3_k127_7976064_5 Domain of unknown function (DUF1987) - - - 0.00000000000000000000000000001433 122.0
BYDH3_k127_799042_0 Sortilin, neurotensin receptor 3, - - - 0.0 1853.0
BYDH3_k127_799042_1 ATPases associated with a variety of cellular activities K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008186 416.0
BYDH3_k127_799042_2 Outer membrane efflux protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001741 414.0
BYDH3_k127_799042_3 Biotin-lipoyl like K01993 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003974 327.0
BYDH3_k127_799042_4 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.00000000000000000000000000000000000000000001003 163.0
BYDH3_k127_799042_5 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000000000003216 157.0
BYDH3_k127_8012329_0 AsmA-like C-terminal region - - - 0.0 1095.0
BYDH3_k127_8012329_1 Belongs to the ompA family - - - 1.175e-279 874.0
BYDH3_k127_8012329_10 - - - - 0.00000000000000000000000000000000002536 145.0
BYDH3_k127_8012329_2 Patatin-like phospholipase K07001 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002979 503.0
BYDH3_k127_8012329_3 PFAM Peptidase family M23 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001227 485.0
BYDH3_k127_8012329_4 ABC-type transport system involved in lipoprotein release permease component K09808,K09815 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003348 473.0
BYDH3_k127_8012329_5 Patatin-like phospholipase K07001 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005257 374.0
BYDH3_k127_8012329_6 PFAM Helicase conserved C-terminal domain K08282 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006549 365.0
BYDH3_k127_8012329_7 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003859 269.0
BYDH3_k127_8012329_8 Belongs to the ompA family - - - 0.00000000000000000000000000000000000000000000000000000003836 204.0
BYDH3_k127_8012329_9 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.000000000000000000000000000000000004251 140.0
BYDH3_k127_8016955_0 Belongs to the ClpA ClpB family K03696 - - 0.0 1204.0
BYDH3_k127_8016955_1 Belongs to the SUA5 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005945 286.0
BYDH3_k127_8016955_2 PFAM WbqC-like protein family - - - 0.0000000000000000000000000000000000000000000000000000000000000002062 226.0
BYDH3_k127_8016955_3 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.000000000000000000000000000000000004391 145.0
BYDH3_k127_802260_0 CinA-like protein K03742,K03743 - 3.5.1.42 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009315 539.0
BYDH3_k127_802260_1 Protein of unknown function (DUF4197) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006728 304.0
BYDH3_k127_802260_2 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region K18005 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 1.12.1.2 0.0000000000000000000000000000000000000284 149.0
BYDH3_k127_8028517_0 Protein of unknown function (DUF3641) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004076 554.0
BYDH3_k127_8028517_1 The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate K03783 - 2.4.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002682 388.0
BYDH3_k127_8028517_2 Belongs to the hyi family K01816 - 5.3.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000568 385.0
BYDH3_k127_8028517_3 Creatinine amidohydrolase K01470 - 3.5.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003491 366.0
BYDH3_k127_8028517_4 Transglycosylase SLT domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001105 320.0
BYDH3_k127_8028517_5 PFAM Bacterial lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.000000000000000000000000000000000000000000000000000000000000000000000000009218 261.0
BYDH3_k127_8028517_6 PFAM Bacterial lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.00000000000000000000000000000000000000000000000000000000000000000000000002096 259.0
BYDH3_k127_8028517_7 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.00000000000000000000000000000000000000000000000000005571 188.0
BYDH3_k127_8046770_0 MacB-like periplasmic core domain - - - 4.487e-210 678.0
BYDH3_k127_8046770_1 MacB-like periplasmic core domain - - - 1.731e-194 633.0
BYDH3_k127_8046770_2 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001694 329.0
BYDH3_k127_8046770_3 Inositol monophosphatase K01092 - 3.1.3.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001947 325.0
BYDH3_k127_8046770_4 PFAM Pterin 4 alpha carbinolamine dehydratase K01724 - 4.2.1.96 0.000000000000000000000000000000003613 129.0
BYDH3_k127_8046770_5 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 0.0000000000000000000001414 107.0
BYDH3_k127_8046770_6 Protein of unknown function (DUF493) - - - 0.00000000000001905 74.0
BYDH3_k127_8047515_0 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001348 418.0
BYDH3_k127_8047515_1 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 GO:0002181,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001012 395.0
BYDH3_k127_8047515_10 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015935,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042274,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.00000000000000000000000000000000000000001944 153.0
BYDH3_k127_8047515_11 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 - - 0.000000000000000000000000000000000000004098 147.0
BYDH3_k127_8047515_12 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000008136 145.0
BYDH3_k127_8047515_13 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000001655 136.0
BYDH3_k127_8047515_14 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000002966 78.0
BYDH3_k127_8047515_15 Belongs to the universal ribosomal protein uL29 family K02904 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000004111 79.0
BYDH3_k127_8047515_16 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000005894 54.0
BYDH3_k127_8047515_2 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006172 316.0
BYDH3_k127_8047515_3 Forms part of the polypeptide exit tunnel K02926 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002827 316.0
BYDH3_k127_8047515_4 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000009883 241.0
BYDH3_k127_8047515_5 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.000000000000000000000000000000000000000000000000000000000000000003675 228.0
BYDH3_k127_8047515_6 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000198 222.0
BYDH3_k127_8047515_7 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0097159,GO:1901363,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000006558 209.0
BYDH3_k127_8047515_8 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000000000000000000001339 178.0
BYDH3_k127_8047515_9 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit K02895 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000002555 163.0
BYDH3_k127_8060486_0 Peptidase S8 and S53 subtilisin kexin sedolisin - - - 0.000000000000000000000000000000000000000000000000000002877 199.0
BYDH3_k127_8060486_1 - - - - 0.000000000000000000000000000001539 130.0
BYDH3_k127_8060486_2 isomerase K01817 - 5.3.1.24 0.0000000000000000000000005853 111.0
BYDH3_k127_8060486_3 Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA K03439 GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008176,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0034708,GO:0036265,GO:0043170,GO:0043412,GO:0043414,GO:0043527,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0106004,GO:0140098,GO:0140101,GO:1901360,GO:1902494,GO:1990234 2.1.1.33 0.000000000000000000000003229 104.0
BYDH3_k127_8104677_0 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase component beta subunit K11381 - 1.2.4.4 0.0 1017.0
BYDH3_k127_8104677_1 PFAM Peptidase M16 inactive domain K07263 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000279 579.0
BYDH3_k127_8104677_10 TIGRFAM bacillithiol system protein YtxJ - - - 0.000000000000000000000000000000000001496 142.0
BYDH3_k127_8104677_11 - - - - 0.00000000000003303 75.0
BYDH3_k127_8104677_2 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K12251 - 3.5.1.53 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007011 535.0
BYDH3_k127_8104677_3 Pfam Sodium hydrogen exchanger - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006847 362.0
BYDH3_k127_8104677_4 AI-2E family transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000526 331.0
BYDH3_k127_8104677_5 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770 - 4.6.1.12 0.00000000000000000000000000000000000000000000000000000000000000000001117 237.0
BYDH3_k127_8104677_6 S-adenosyl-L-methionine-dependent methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000006349 234.0
BYDH3_k127_8104677_8 redox protein regulator of disulfide bond formation - - - 0.0000000000000000000000000000000000000000000000000243 182.0
BYDH3_k127_8104677_9 Belongs to the agmatine deiminase family K10536 - 3.5.3.12 0.00000000000000000000000000000000000000000000005726 170.0
BYDH3_k127_8157473_0 Cystathionine beta-synthase K01697 - 4.2.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007556 502.0
BYDH3_k127_8157473_1 Belongs to the ATCase OTCase family K00609 GO:0003674,GO:0003824,GO:0004070,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016741,GO:0016743,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001519 320.0
BYDH3_k127_8157473_2 chlorophyll binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004964 259.0
BYDH3_k127_8157473_3 Cystathionine beta-synthase K01697 - 4.2.1.22 0.00000000000000000000000000000000000000000000000000000000000000000001009 234.0
BYDH3_k127_8157473_4 chlorophyll binding - - - 0.00000000000000000000000000000000000000000000000002086 194.0
BYDH3_k127_8157750_0 Sugar nucleotidyl transferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001032 506.0
BYDH3_k127_8157750_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003426 467.0
BYDH3_k127_8157750_2 DNA polymerase III, delta' subunit K02341 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001263 355.0
BYDH3_k127_8157750_3 Ribosomal protein L31 K02909 - - 0.00000000000000000000000000000000001151 136.0
BYDH3_k127_8158413_0 PFAM Peptidase M16 inactive domain K07263 - - 0.0 1315.0
BYDH3_k127_8158413_1 Acyl-CoA dehydrogenase, C-terminal domain K00249 - 1.3.8.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002993 603.0
BYDH3_k127_8158413_2 Phosphotransferase enzyme family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004417 429.0
BYDH3_k127_8158413_3 KR domain K05783 - 1.3.1.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004013 320.0
BYDH3_k127_8158413_6 Pyrrolo-quinoline quinone K00117 - 1.1.5.2 0.000000000000000002792 87.0
BYDH3_k127_8168267_0 CHAT domain - - - 9.184e-226 728.0
BYDH3_k127_8168267_1 Threonine synthase K01733 - 4.2.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001013 531.0
BYDH3_k127_8168267_2 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001334 313.0
BYDH3_k127_8178994_0 family 2 sugar binding - - - 0.0000000000000000000000000000000000000000000000000000522 196.0
BYDH3_k127_8178994_1 TonB-dependent Receptor Plug Domain - - - 0.00000001525 57.0
BYDH3_k127_8178994_2 transposition K07497 - - 0.00000009069 57.0
BYDH3_k127_8178994_3 Hemopexin - - - 0.000004197 58.0
BYDH3_k127_8278078_0 Peptidase M16 inactive domain - - - 5.662e-244 771.0
BYDH3_k127_8278078_1 PFAM Peptidase M16 inactive domain - - - 9.244e-212 665.0
BYDH3_k127_8278078_2 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001697 556.0
BYDH3_k127_8278078_3 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.00000000000000000000000000002746 121.0
BYDH3_k127_8278078_4 Belongs to the carbohydrate kinase PfkB family - - - 0.000000000000000000005923 93.0
BYDH3_k127_8278078_5 Belongs to the bacterial ribosomal protein bL34 family K02914 - - 0.000000000000000001626 85.0
BYDH3_k127_8279854_0 Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA K00639 - 2.3.1.29 1.812e-216 676.0
BYDH3_k127_8279854_1 Caspase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002017 546.0
BYDH3_k127_8279854_2 - - - - 0.00000008285 55.0
BYDH3_k127_8297025_0 PFAM Tetratricopeptide - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006766 505.0
BYDH3_k127_8297025_1 Nucleotidyl transferase K00973 - 2.7.7.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005964 451.0
BYDH3_k127_8297025_2 Polysaccharide biosynthesis protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002947 425.0
BYDH3_k127_8297025_3 Belongs to the enoyl-CoA hydratase isomerase family K01715 - 4.2.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000119 322.0
BYDH3_k127_8297025_4 Peptidase, M23 - - - 0.0000000000000000000000000000000000000000000000000000005041 200.0
BYDH3_k127_8297025_5 Domain of unknown function (DUF4292) - - - 0.00000000000000000000000000000000000000009166 160.0
BYDH3_k127_831438_0 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K03307 - - 2.106e-256 799.0
BYDH3_k127_831438_1 Inositol oxygenase K00469 - 1.13.99.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003768 494.0
BYDH3_k127_831438_2 Two component regulator propeller - - - 0.0000000000000000001521 88.0
BYDH3_k127_8366203_0 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001724 317.0
BYDH3_k127_8366203_1 - - - - 0.000000000000000000000000000000000000000000000000000000000001732 211.0
BYDH3_k127_8366203_2 Belongs to the HesB IscA family K13628 - - 0.000000000000000000000000000000000000000000000000000007607 190.0
BYDH3_k127_8366203_3 Glyoxalase bleomycin resistance protein dioxygenase K05606 - 5.1.99.1 0.0000000000000000000000000000000000000000000000000000821 188.0
BYDH3_k127_8366203_4 Protein of unknown function (DUF2490) - - - 0.000000000000000000000000000000000001395 147.0
BYDH3_k127_8367581_0 homocysteine K00547 GO:0003674,GO:0003824,GO:0005488,GO:0006575,GO:0006790,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008168,GO:0008172,GO:0008270,GO:0008757,GO:0008898,GO:0009987,GO:0016740,GO:0016741,GO:0032259,GO:0033477,GO:0033554,GO:0043167,GO:0043169,GO:0044237,GO:0046872,GO:0046914,GO:0050896,GO:0051716,GO:0071704,GO:1901564 2.1.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005204 275.0
BYDH3_k127_8367581_1 Transcription elongation factor, GreA/GreB, C-term - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002389 263.0
BYDH3_k127_8367581_3 Strictosidine synthase - - - 0.00000003488 55.0
BYDH3_k127_8379644_0 PFAM Serine carboxypeptidase - - - 5.523e-243 758.0
BYDH3_k127_8379644_1 Belongs to the Glu Leu Phe Val dehydrogenases family K00262 GO:0003674,GO:0003824,GO:0004353,GO:0004354,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006536,GO:0006537,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009986,GO:0009987,GO:0016053,GO:0016491,GO:0016638,GO:0016639,GO:0019752,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.4.1.4 9.584e-215 672.0
BYDH3_k127_8379644_2 Belongs to the methyltransferase superfamily K07444 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002099 555.0
BYDH3_k127_8379644_3 MatE - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000108 389.0
BYDH3_k127_8379644_4 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006893 369.0
BYDH3_k127_8379644_5 permease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001053 381.0
BYDH3_k127_8379644_6 PFAM Glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002041 319.0
BYDH3_k127_839821_0 PFAM GH3 auxin-responsive promoter - - - 3.064e-242 754.0
BYDH3_k127_839821_1 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006721,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016114,GO:0016491,GO:0016614,GO:0016616,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0030145,GO:0030604,GO:0032787,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046490,GO:0046872,GO:0046914,GO:0048037,GO:0050661,GO:0050662,GO:0051483,GO:0051484,GO:0055114,GO:0070402,GO:0071704,GO:0090407,GO:0097159,GO:1901135,GO:1901265,GO:1901363,GO:1901576 1.1.1.267 1.296e-198 623.0
BYDH3_k127_839821_2 COGs COG4299 conserved - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006195 561.0
BYDH3_k127_839821_3 zinc metalloprotease K11749 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005917 471.0
BYDH3_k127_839821_4 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000415 138.0
BYDH3_k127_8399174_0 Motility related/secretion protein - - - 5.741e-238 753.0
BYDH3_k127_8399174_1 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001591 532.0
BYDH3_k127_8399174_2 TIGRFAM glucose galactose transporter K02429 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000539 529.0
BYDH3_k127_8399174_3 Peptidase family M28 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000022 516.0
BYDH3_k127_8399174_4 Nucleotidyl transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000501 344.0
BYDH3_k127_8399174_5 phosphotransferase enzyme family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001245 282.0
BYDH3_k127_8399174_6 Glycine cleavage H-protein K02437 - - 0.000000000000000000000000000000000000000000000000000000009827 199.0
BYDH3_k127_8399174_7 Inosine-uridine preferring nucleoside hydrolase K01250 - - 0.000000000000000000000000000001715 124.0
BYDH3_k127_8462527_0 Motility related/secretion protein - - - 0.0 1084.0
BYDH3_k127_8491398_0 Saccharopine dehydrogenase NADP binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003447 450.0
BYDH3_k127_8491398_1 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004746 435.0
BYDH3_k127_8491398_2 Rhodanese Homology Domain K06917 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001395 271.0
BYDH3_k127_8491398_3 lipoprotein biosynthetic process K13292 - - 0.0000000000000000000000000000000000000000000000000000000000000000164 228.0
BYDH3_k127_8491398_4 - - - - 0.000000000000000000000009039 106.0
BYDH3_k127_8495796_0 FAD dependent oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006823 608.0
BYDH3_k127_8495796_1 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001112 334.0
BYDH3_k127_8495796_2 Transcriptional regulatory protein, C terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001275 306.0
BYDH3_k127_8495796_3 Protein of unknown function (Porph_ging) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001125 268.0
BYDH3_k127_8519802_0 serine-type endopeptidase activity K04771 - 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001482 449.0
BYDH3_k127_8519802_1 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0034641,GO:0034645,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901576,GO:1990837 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006454 359.0
BYDH3_k127_8574163_0 PFAM Proline dehydrogenase K00318 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003855 543.0
BYDH3_k127_8574163_1 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 0.0000000000000000000000000000000002935 134.0
BYDH3_k127_8574163_2 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735 - 4.2.3.4 0.00000000000000000000000000356 113.0
BYDH3_k127_8578959_0 PFAM TonB-dependent Receptor Plug - - - 1.183e-246 779.0
BYDH3_k127_8578959_1 COGs COG0659 Sulfate permease and related transporter (MFS superfamily) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001755 544.0
BYDH3_k127_8578959_2 Type ii and iii secretion system protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007384 419.0
BYDH3_k127_8578959_3 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006563 309.0
BYDH3_k127_8578959_4 PFAM methyladenine glycosylase K01246 - 3.2.2.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002834 302.0
BYDH3_k127_8578959_5 Sulfatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000992 246.0
BYDH3_k127_8578959_6 translation initiation inhibitor, yjgF family - - - 0.000000000000000000000000000000000000000000000000000000000000003675 221.0
BYDH3_k127_8578959_7 RNA polymerase sigma factor, sigma-70 family K03088 - - 0.0000000000000000000000000000000000000000000000000000000001993 209.0
BYDH3_k127_8578959_8 Domain of unknown function (DUF4974) - - - 0.00000000000000000000000000000000000000000000000000001141 202.0
BYDH3_k127_859330_0 Belongs to the iron ascorbate-dependent oxidoreductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001218 545.0
BYDH3_k127_859330_1 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002597 430.0
BYDH3_k127_859330_2 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005592 322.0
BYDH3_k127_859330_3 TIGRFAM chromate transporter, chromate ion transporter (CHR) family K07240 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001092 283.0
BYDH3_k127_859330_4 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0016740,GO:0016741,GO:0032259,GO:0044424,GO:0044444,GO:0044464 2.1.1.297 0.00000000000000000000000000000000000000000000000000000000000003578 225.0
BYDH3_k127_859330_5 - - - - 0.0000000000000000000004084 101.0
BYDH3_k127_859330_6 thiamine pyrophosphokinase K00949 - 2.7.6.2 0.0000000006524 66.0
BYDH3_k127_8613754_0 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 - 1.1.1.133 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003042 290.0
BYDH3_k127_8613754_1 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03768 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001693 286.0
BYDH3_k127_8613754_2 DNA polymerase III, delta' subunit K02341 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000006132 198.0
BYDH3_k127_8635792_0 Patatin-like phospholipase K07001 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006251 464.0
BYDH3_k127_8635792_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000001383 239.0
BYDH3_k127_8635792_2 histidine kinase dimerisation and phosphoacceptor region - - - 0.0000000000004752 73.0
BYDH3_k127_8643629_0 PFAM 3-Oxoacyl- acyl-carrier-protein (ACP) synthase III K00648 - 2.3.1.180 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009834 478.0
BYDH3_k127_8643629_1 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00015 - 1.1.1.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009577 410.0
BYDH3_k127_8643629_2 COGs COG1235 Metal-dependent hydrolase of the beta-lactamase superfamily I - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004246 351.0
BYDH3_k127_8643629_3 E-Z type HEAT repeats - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001137 332.0
BYDH3_k127_8643629_4 SPFH domain / Band 7 family - - - 0.0000000000000000000000000000000000000000000000000000000001161 220.0
BYDH3_k127_8653057_0 Belongs to the glycosyl hydrolase 13 family K01200,K01214 - 3.2.1.41,3.2.1.68 0.0 1036.0
BYDH3_k127_8653057_1 Anaerobic c4-dicarboxylate membrane transporter K07791,K07792 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001064 482.0
BYDH3_k127_8653057_2 Sodium calcium exchanger membrane K07300 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001522 374.0
BYDH3_k127_8653057_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001203 259.0
BYDH3_k127_8653057_4 - - - - 0.00000000000000000000000000000000000000000000000001423 188.0
BYDH3_k127_8653057_5 Protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000006855 181.0
BYDH3_k127_8653057_6 membrane - - - 0.000000000000000000000000000000000000000003434 164.0
BYDH3_k127_8653057_7 Ion channel - - - 0.0000000000000000000003092 105.0
BYDH3_k127_8658234_0 Peptidase, M28 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003137 452.0
BYDH3_k127_8658234_1 self proteolysis - - - 0.000000000000000000001604 112.0
BYDH3_k127_8658234_2 Response regulator of the LytR AlgR family - - - 0.000000000000000005576 85.0
BYDH3_k127_8658234_3 Subtilase family - - - 0.0000000000593 68.0
BYDH3_k127_8658234_4 PFAM TonB-dependent Receptor Plug - - - 0.000002544 52.0
BYDH3_k127_8658234_5 Concanavalin A-like lectin/glucanases superfamily - - - 0.000263 55.0
BYDH3_k127_8707235_0 Dipeptidyl peptidase IV (DPP IV) N-terminal region K01278 - 3.4.14.5 0.0 1047.0
BYDH3_k127_8707235_1 TonB-dependent Receptor Plug - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000142 478.0
BYDH3_k127_8707235_2 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001625 462.0
BYDH3_k127_8707235_3 LytTr DNA-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003263 340.0
BYDH3_k127_8707235_4 Mycothiol maleylpyruvate isomerase N-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003716 287.0
BYDH3_k127_8707235_5 - - - - 0.0000000000000000000000000000000000002504 142.0
BYDH3_k127_8721245_0 ASPIC UnbV domain protein - - - 1.652e-279 873.0
BYDH3_k127_8721245_1 ASPIC and UnbV - - - 9.857e-195 619.0
BYDH3_k127_8721245_2 ASPIC and UnbV - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002528 516.0
BYDH3_k127_8721245_3 - - - - 0.0000000000000000000000000000000003996 139.0
BYDH3_k127_8721245_4 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella - - - 0.0000000000000000001182 93.0
BYDH3_k127_8727079_0 TonB-dependent Receptor Plug - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007976 587.0
BYDH3_k127_8727079_1 Domain of unknown function (DUF4249) - - - 0.00000000000000000000000000000000000622 150.0
BYDH3_k127_8727079_2 TonB-dependent Receptor Plug Domain - - - 0.0000000000000000000000000000001467 142.0
BYDH3_k127_8727079_3 Collagen-binding protein - - - 0.0000000002005 63.0
BYDH3_k127_8733023_0 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 9.897e-257 796.0
BYDH3_k127_8733023_1 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 - 1.1.1.85 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000359 572.0
BYDH3_k127_8733023_2 Haloacid dehalogenase-like hydrolase K02566 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001826 432.0
BYDH3_k127_8733023_3 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 - 4.3.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003088 320.0
BYDH3_k127_8733023_4 Belongs to the alpha-IPM synthase homocitrate synthase family K01649 - 2.3.3.13 0.000000000000000000000000000000000000000000000000000000000000000000000000001511 256.0
BYDH3_k127_8733023_5 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.0000000000000000000000000000000000000000000000444 171.0
BYDH3_k127_8733023_6 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.000000000000000000000000000000005065 128.0
BYDH3_k127_8776213_0 FAD dependent oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005488 526.0
BYDH3_k127_8776213_1 Psort location CytoplasmicMembrane, score 10.00 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006118 434.0
BYDH3_k127_8776213_10 - - - - 0.000000002358 65.0
BYDH3_k127_8776213_2 Calcineurin-like phosphoesterase superfamily domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002874 415.0
BYDH3_k127_8776213_3 glycosyl transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003926 394.0
BYDH3_k127_8776213_4 Mechanosensitive ion channel K16052 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001255 394.0
BYDH3_k127_8776213_5 beta-glucosidase K05350 - 3.2.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002357 378.0
BYDH3_k127_8776213_6 PHP domain K04486 - 3.1.3.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004364 272.0
BYDH3_k127_8776213_7 HD domain K21196 - 1.13.11.78 0.000000000000000000000000000000000000000000000000000000000000000000000002775 249.0
BYDH3_k127_8776213_8 HAD-hyrolase-like - - - 0.000000000000000000000000000000000000000000000000000000002097 207.0
BYDH3_k127_8776213_9 HAD-hyrolase-like - - - 0.00000000000000000000000000000000000000000000005147 177.0
BYDH3_k127_8794184_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003462 464.0
BYDH3_k127_8794184_1 Protease prsW family - - - 0.000000000000000000000000000000000000000000000000000000000000000002714 234.0
BYDH3_k127_8794184_2 - - - - 0.00000000000002057 73.0
BYDH3_k127_8854354_0 - - - - 4.757e-209 658.0
BYDH3_k127_8854354_1 PFAM TonB-dependent Receptor Plug - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000527 302.0
BYDH3_k127_8854354_2 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004033 289.0
BYDH3_k127_8854354_3 Pyridoxal-phosphate dependent enzyme K01754 - 4.3.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000112 263.0
BYDH3_k127_8854354_4 Nitroreductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004426 249.0
BYDH3_k127_8854354_5 - - - - 0.000000000000000004492 93.0
BYDH3_k127_8892542_0 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 5.504e-321 1002.0
BYDH3_k127_8892542_1 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 9.643e-221 689.0
BYDH3_k127_8892542_2 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001333 432.0
BYDH3_k127_8892542_3 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009429 427.0
BYDH3_k127_8892542_4 in asymptomatic bacteriuria E. coli strains 83972 and VR50, the ygiD gene is upregulated during biofilm formation in urine K15777 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004309 342.0
BYDH3_k127_8892542_5 CAAX protease self-immunity - - - 0.00000000000000000000000000000000000007037 152.0
BYDH3_k127_8892542_6 - - - - 0.00000000000000006158 86.0
BYDH3_k127_8908713_0 Domain of Unknown Function with PDB structure (DUF3857) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001286 524.0
BYDH3_k127_8908713_1 Domain of Unknown Function with PDB structure (DUF3857) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002106 525.0
BYDH3_k127_8908713_2 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000001504 136.0
BYDH3_k127_8926724_0 Phosphate acetyl butaryl transferase K00027,K00029 - 1.1.1.38,1.1.1.40 0.0 1152.0
BYDH3_k127_8926724_1 PFAM Transglycosylase SLT domain K08307 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002354 532.0
BYDH3_k127_8926724_2 Domain of unknown function (DUF4837) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003462 359.0
BYDH3_k127_8926724_3 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.00000000000000000000000000006466 117.0
BYDH3_k127_8958091_0 Penicillin-binding protein, dimerisation domain K05515 - 3.4.16.4 1.955e-278 866.0
BYDH3_k127_8958091_1 Belongs to the SEDS family K05837 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001213 524.0
BYDH3_k127_8958091_2 thymidine kinase K00857 GO:0003674,GO:0003824,GO:0004797,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006213,GO:0006259,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009120,GO:0009123,GO:0009124,GO:0009157,GO:0009162,GO:0009165,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0018130,GO:0019136,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046104,GO:0046125,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0090304,GO:0090407,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000943 290.0
BYDH3_k127_8958091_3 Involved in formation and maintenance of cell shape K03570 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005641 266.0
BYDH3_k127_8958091_4 Involved in DNA repair and RecF pathway recombination K03584 - - 0.00000000000000000000000000000000000000000000000000000000000001162 222.0
BYDH3_k127_8958091_5 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins - - - 0.0000000000000000000000000000000000000000000000000000000001438 215.0
BYDH3_k127_8958091_6 TIGRFAM cell shape determining protein, MreB Mrl family K03569 - - 0.0000000000000000000000000000000000000000008831 157.0
BYDH3_k127_8958091_7 rod shape-determining protein MreD - - - 0.00000000000000000000000000000000000000003753 159.0
BYDH3_k127_8958091_8 PFAM 2Fe-2S iron-sulfur cluster binding domain K04755 - - 0.00000000000000000000000000001505 120.0
BYDH3_k127_8958091_9 fatty acid desaturase K00508 - 1.14.19.3 0.0000000007545 60.0
BYDH3_k127_8967664_0 PFAM Type III restriction enzyme, res subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002413 451.0
BYDH3_k127_8967664_1 PFAM Cation transport protein K03498 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004221 426.0
BYDH3_k127_8967664_2 Uncharacterised 5xTM membrane BCR, YitT family COG1284 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000537 364.0
BYDH3_k127_8967664_3 Domain of unknown function (DUF4918) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003626 251.0
BYDH3_k127_8967664_4 TrkA-N domain K03499 - - 0.00000000000000000000000000000000000000000000000000000002361 204.0
BYDH3_k127_8987472_0 Fatty acid desaturase K00496 - 1.14.15.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002131 535.0
BYDH3_k127_8987472_1 Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC) K15460 GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008175,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016426,GO:0016430,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.223 0.0000000000000000000000000000000000000000000000000000004193 201.0
BYDH3_k127_8987472_2 DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation K05592 - 3.6.4.13 0.000000004561 58.0
BYDH3_k127_8998633_0 glutamine synthetase K01915 - 6.3.1.2 0.0 1106.0
BYDH3_k127_8998633_1 Belongs to the peptidase S41A family K03797 - 3.4.21.102 2.096e-212 672.0
BYDH3_k127_8998633_10 Tellurite resistance protein TerB - - - 0.00000000000000000001275 92.0
BYDH3_k127_8998633_2 PFAM Peptidase M19, renal dipeptidase K01273 - 3.4.13.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003223 567.0
BYDH3_k127_8998633_3 Major facilitator superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001046 490.0
BYDH3_k127_8998633_4 alanine racemase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001023 423.0
BYDH3_k127_8998633_5 Serine aminopeptidase, S33 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002329 283.0
BYDH3_k127_8998633_6 Fatty acid hydroxylase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002626 278.0
BYDH3_k127_8998633_7 PFAM Endoribonuclease L-PSP - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001683 241.0
BYDH3_k127_8998633_8 Putative auto-transporter adhesin, head GIN domain - - - 0.000000000000000000000000000000000000000000000000000000000000000351 228.0
BYDH3_k127_8998633_9 COGs COG2610 H gluconate symporter and related permease K06155 - - 0.000000000000000000000000000000000001352 139.0
BYDH3_k127_9005895_0 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 9.387e-205 645.0
BYDH3_k127_9005895_1 PFAM Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001031 563.0
BYDH3_k127_9005895_2 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000002554 144.0
BYDH3_k127_9008910_0 ABC transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002292 381.0
BYDH3_k127_9008910_1 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K03307 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002618 280.0
BYDH3_k127_9008910_10 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.00000000001258 67.0
BYDH3_k127_9008910_2 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003982 265.0
BYDH3_k127_9008910_3 COGs COG2208 Serine phosphatase RsbU regulator of sigma subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000002696 237.0
BYDH3_k127_9008910_4 Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000001371 219.0
BYDH3_k127_9008910_5 Protein of unknown function, DUF255 - - - 0.00000000000000000000000000000000000000000000000000000000006275 211.0
BYDH3_k127_9008910_6 Putative zinc- or iron-chelating domain - - - 0.0000000000000000000000000000000000000000000000000000001964 201.0
BYDH3_k127_9008910_7 Putative lumazine-binding - - - 0.000000000000000000000000000000000000000001092 162.0
BYDH3_k127_9008910_8 OmpA family - - - 0.00000000000000000000000000002926 121.0
BYDH3_k127_9008910_9 - - - - 0.000000000000000000000000002841 123.0
BYDH3_k127_9018733_0 PAP2 superfamily - - - 3.905e-245 765.0
BYDH3_k127_9018733_1 Circularly permuted ATP-grasp type 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000142 609.0
BYDH3_k127_9018733_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001048 382.0
BYDH3_k127_9034167_0 Peptidase C39 K20344 - - 0.0 1050.0
BYDH3_k127_9034167_1 PFAM Peptidase M16 inactive domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000542 433.0
BYDH3_k127_9034167_10 - - - - 0.000008385 50.0
BYDH3_k127_9034167_2 transport - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001024 418.0
BYDH3_k127_9034167_3 Barrel-sandwich domain of CusB or HlyD membrane-fusion K20345 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006723 305.0
BYDH3_k127_9034167_4 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.0000000000000000000000000003889 121.0
BYDH3_k127_9034167_6 Belongs to the carbohydrate kinase PfkB family - - - 0.0000000000002244 70.0
BYDH3_k127_9034167_7 Histidine kinase K07777 - 2.7.13.3 0.00000000001796 74.0
BYDH3_k127_9034167_8 Barrel-sandwich domain of CusB or HlyD membrane-fusion K20345 - - 0.0000001051 57.0
BYDH3_k127_9034167_9 CAAX protease self-immunity - - - 0.0000007989 58.0
BYDH3_k127_9037686_0 Belongs to the heme-copper respiratory oxidase family K15862 - 1.9.3.1 0.0 1203.0
BYDH3_k127_9037686_1 TIGRFAM cytochrome c oxidase accessory protein - - - 3.339e-212 668.0
BYDH3_k127_9037686_10 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686,K05516 - - 0.00000000000001727 83.0
BYDH3_k127_9037686_11 PFAM Cbb3-type cytochrome oxidase component FixQ - - - 0.0000000002477 63.0
BYDH3_k127_9037686_12 PFAM FixH - - - 0.00000004357 60.0
BYDH3_k127_9037686_2 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002808 370.0
BYDH3_k127_9037686_3 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000118 336.0
BYDH3_k127_9037686_4 Universal stress protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007979 304.0
BYDH3_k127_9037686_5 TIGRFAM cytochrome c oxidase, cbb3-type, subunit III K00406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002029 292.0
BYDH3_k127_9037686_6 Translation initiation factor SUI1 K03113 - - 0.0000000000000000000000000000000000001258 144.0
BYDH3_k127_9037686_7 Cytochrome C biogenesis protein transmembrane region K09792 - - 0.000000000000000000000000000001148 129.0
BYDH3_k127_9037686_8 DinB superfamily - - - 0.000000000000000000000001591 109.0
BYDH3_k127_904198_0 CarboxypepD_reg-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002424 353.0
BYDH3_k127_904198_1 Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate K01619 GO:0003674,GO:0003824,GO:0004139,GO:0005975,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009166,GO:0009262,GO:0009264,GO:0009987,GO:0016052,GO:0016829,GO:0016830,GO:0016832,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 4.1.2.4 0.00000000000000000000000000000000000000001953 154.0
BYDH3_k127_904198_2 Deoxyguanosinetriphosphate triphosphohydrolase-like protein K01129 - 3.1.5.1 0.00000000000000000000000000000000000000003412 157.0
BYDH3_k127_9071975_0 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY K03106 - 3.6.5.4 1.249e-238 742.0
BYDH3_k127_9071975_1 GntP family permease K03299 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002184 354.0
BYDH3_k127_9071975_2 Belongs to the glycerate kinase type-1 family K00865 - 2.7.1.165 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005482 342.0
BYDH3_k127_9071975_3 Molybdenum cofactor synthesis domain protein K03750 - 2.10.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001106 288.0
BYDH3_k127_9071975_4 Crp Fnr family transcriptional regulator K01420 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007475 265.0
BYDH3_k127_9071975_5 Putative PepSY_TM-like K09939 - - 0.0000000000000000000000000000000000000000000000000000003038 198.0
BYDH3_k127_9071975_6 PFAM Rhodanese-like domain - - - 0.0000000000000000000000000000233 118.0
BYDH3_k127_9071975_7 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS - - - 0.000000000000000000002483 94.0
BYDH3_k127_9079542_0 PFAM Pregnancy-associated plasma protein-A - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002226 274.0
BYDH3_k127_9079542_1 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000143 251.0
BYDH3_k127_9138936_0 lipolytic protein G-D-S-L family - - - 0.000000000000000000000000000000000000000000000001732 180.0
BYDH3_k127_9138936_1 YCII-related domain - - - 0.000000000000000000000000000000000000000000000002108 177.0
BYDH3_k127_9244958_0 Superfamily I DNA and RNA - - - 3.933e-310 976.0
BYDH3_k127_9244958_1 Asparagine synthase K01953 - 6.3.5.4 3.52e-266 833.0
BYDH3_k127_9244958_2 FAD linked oxidases, C-terminal domain K00102,K00104 - 1.1.2.4,1.1.3.15 6.986e-218 685.0
BYDH3_k127_9244958_3 Asparaginase K01444,K13051 GO:0005575,GO:0005623,GO:0042597,GO:0044464 3.4.19.5,3.5.1.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005517 444.0
BYDH3_k127_9244958_4 S1 P1 nuclease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002846 311.0
BYDH3_k127_9244958_5 Domain of Unknown Function (DUF1080) - - - 0.000000000000000000000000000000000000000000000000000000000000000000007751 241.0
BYDH3_k127_9244958_6 Helix-hairpin-helix motif - - - 0.0000000000000000000000000000000000000000000000000000000000001001 224.0
BYDH3_k127_9244958_7 Uncharacterised ACR, YagE family COG1723 - - - 0.0000000000000000000000000000000000000000000000000003039 198.0
BYDH3_k127_9244958_8 Cell wall-associated hydrolase (invasion-associated protein) K13695 - - 0.000000000000000000000000000000000000000000000003571 177.0
BYDH3_k127_9244958_9 Participates in the control of copper homeostasis K06201 - - 0.00000000000000000000000000000000000000000001178 164.0
BYDH3_k127_9261049_0 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides K00525 - 1.17.4.1 0.0 1187.0
BYDH3_k127_9261049_1 PFAM TonB-dependent Receptor Plug - - - 4.437e-305 968.0
BYDH3_k127_9261049_2 reductase, small chain K00526 - 1.17.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000168 580.0
BYDH3_k127_9261049_3 Starch-binding associating with outer membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000005254 255.0
BYDH3_k127_9261049_4 This protein binds to 23S rRNA in the presence of protein L20 K02888 GO:0003674,GO:0003735,GO:0005198 - 0.000000000000000000000000000000000000000009758 155.0
BYDH3_k127_9261049_5 Belongs to the bacterial ribosomal protein bL27 family K02899 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000000000003917 146.0
BYDH3_k127_9284309_0 phosphoesterase RecJ domain protein K06881 - 3.1.13.3,3.1.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007803 430.0
BYDH3_k127_9284309_1 FKBP-type peptidyl-prolyl cis-trans isomerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005171 247.0
BYDH3_k127_9284309_2 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009141,GO:0009143,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 3.6.1.66 0.000000000000000000000000000000000000000000000000000000000007138 211.0
BYDH3_k127_9284309_3 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 - 2.7.4.6 0.000000000000000000000000000000846 122.0
BYDH3_k127_9284309_4 PFAM FKBP-type peptidyl-prolyl cis-trans isomerase K01802,K03767,K03772,K03773 - 5.2.1.8 0.000000000000000000000000000005104 125.0
BYDH3_k127_9287837_0 Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp) K01876 - 6.1.1.12 3.726e-304 939.0
BYDH3_k127_9287837_1 CarboxypepD_reg-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002485 526.0
BYDH3_k127_9287837_10 Protein of unknown function (DUF1572) - - - 0.0000000000000000000000000000000000000000000000000000003708 196.0
BYDH3_k127_9287837_11 - - - - 0.0000000000000000000000000000000000000000000000000007177 188.0
BYDH3_k127_9287837_12 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000001026 178.0
BYDH3_k127_9287837_13 Diacylglycerol kinase - - - 0.00000000000000000000000000000000000000000000002557 177.0
BYDH3_k127_9287837_14 Arylesterase - - - 0.0000000000000000000000000000000000625 140.0
BYDH3_k127_9287837_15 - - - - 0.000000000000000000000001469 108.0
BYDH3_k127_9287837_16 - - - - 0.0000000000000001721 81.0
BYDH3_k127_9287837_17 - - - - 0.0000000000000004405 79.0
BYDH3_k127_9287837_2 Branched-chain amino acid aminotransferase K00826 - 2.6.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001917 443.0
BYDH3_k127_9287837_3 Protein of unknown function (DUF2911) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001345 436.0
BYDH3_k127_9287837_4 NADPH:quinone reductase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001421 349.0
BYDH3_k127_9287837_5 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000558 335.0
BYDH3_k127_9287837_6 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000874 265.0
BYDH3_k127_9287837_7 Pyridoxamine 5'-phosphate oxidase K07005 - - 0.000000000000000000000000000000000000000000000000000000000000000000003376 240.0
BYDH3_k127_9287837_8 chlorophyll binding - - - 0.0000000000000000000000000000000000000000000000000000000000000005478 234.0
BYDH3_k127_9287837_9 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K11991 - 3.5.4.33 0.000000000000000000000000000000000000000000000000000000008394 201.0
BYDH3_k127_9292522_0 6-phosphogluconolactonase activity - - - 0.00000000000000000000000000000000000000000000001757 188.0
BYDH3_k127_9292522_2 Pkd domain containing protein - - - 0.000000000000123 83.0
BYDH3_k127_9294692_0 Aconitase C-terminal domain K01681 - 4.2.1.3 0.0 1257.0
BYDH3_k127_9294692_1 Sodium/hydrogen exchanger family K03316 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006416 496.0
BYDH3_k127_9294692_2 ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity K06048 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006385 384.0
BYDH3_k127_9294692_3 TIGRFAM GTP cyclohydrolase I K01495 - 3.5.4.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002244 352.0
BYDH3_k127_9294692_4 TIGRFAM Bacteroidetes-specific - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002923 294.0
BYDH3_k127_9294692_5 synthase K01737 - 4.1.2.50,4.2.3.12 0.000000000000000000000000000000006594 131.0
BYDH3_k127_9294692_6 Domain of Unknown Function (DUF1080) - - - 0.00000000000228 66.0
BYDH3_k127_9294692_7 Lipoprotein K05811 - - 0.00000000021 63.0
BYDH3_k127_9299415_0 nucleotide phosphotransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000214 503.0
BYDH3_k127_9299415_1 Pfam:UPF0118 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001047 405.0
BYDH3_k127_9299415_10 - - - - 0.00000000000003306 83.0
BYDH3_k127_9299415_2 Sodium/hydrogen exchanger family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002675 389.0
BYDH3_k127_9299415_3 Surface antigen - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003789 300.0
BYDH3_k127_9299415_4 Sodium/hydrogen exchanger family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006731 275.0
BYDH3_k127_9299415_5 Protein of unknown function (DUF3667) - - - 0.0000000000000000000000000000000000000000000002192 177.0
BYDH3_k127_9299415_6 Domain of unknown function (DUF4136) - - - 0.00000000000000000000000000000000000000007624 158.0
BYDH3_k127_9299415_7 - - - - 0.000000000000000000000000000000000000000388 157.0
BYDH3_k127_9299415_8 - - - - 0.000000000000000000000000000000000001064 147.0
BYDH3_k127_9299415_9 - - - - 0.00000000000001376 77.0
BYDH3_k127_9325127_0 COG1529 Aerobic-type carbon monoxide dehydrogenase large subunit CoxL CutL homologs K07303 - 1.3.99.16 2.507e-271 854.0
BYDH3_k127_9325127_1 ASPIC and UnbV - - - 3.693e-246 780.0
BYDH3_k127_9325127_2 Histidine kinase - - - 0.00000000000000000000000000000000000000000000001348 191.0
BYDH3_k127_9325127_3 Pyridoxamine 5'-phosphate oxidase like - - - 0.00000000000000000000000000000000000001498 150.0
BYDH3_k127_9325127_4 Tetratricopeptide repeat - - - 0.000000004152 58.0
BYDH3_k127_9337599_0 outer membrane efflux protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004235 467.0
BYDH3_k127_9337599_1 Transcriptional regulator, TetR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002389 253.0
BYDH3_k127_9337599_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001331 245.0
BYDH3_k127_939866_0 Belongs to the LDH2 MDH2 oxidoreductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001934 500.0
BYDH3_k127_939866_1 N-terminal domain of unknown function (DUF4140) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004969 491.0
BYDH3_k127_9486508_0 Belongs to the class-II aminoacyl-tRNA synthetase family K01880 - 6.1.1.14 7.962e-262 813.0
BYDH3_k127_9486508_1 Deoxyguanosinetriphosphate triphosphohydrolase-like protein K01129 - 3.1.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001515 534.0
BYDH3_k127_9486508_10 Glucose-regulated metallo-peptidase M90 K09933 - - 0.000000000000000000000000000000000000003248 156.0
BYDH3_k127_9486508_11 Sodium/hydrogen exchanger family - - - 0.0000000000000000000000000137 112.0
BYDH3_k127_9486508_2 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001598 516.0
BYDH3_k127_9486508_3 Sodium/hydrogen exchanger family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001924 452.0
BYDH3_k127_9486508_4 Scramblase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002048 295.0
BYDH3_k127_9486508_5 Universal stress protein family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000227 273.0
BYDH3_k127_9486508_6 photoreceptor activity - - - 0.00000000000000000000000000000000000000000000000000000000000000003604 239.0
BYDH3_k127_9486508_7 Conserved hypothetical protein (DUF2461) - - - 0.000000000000000000000000000000000000000000000000000000000000539 217.0
BYDH3_k127_9486508_8 Four helix bundle sensory module for signal transduction - - - 0.00000000000000000000000000000000000000000000000000001955 204.0
BYDH3_k127_9486508_9 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella - - - 0.0000000000000000000000000000000000000000000000000334 182.0
BYDH3_k127_9486660_0 Nitrous oxide reductase K00376 - 1.7.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001094 444.0
BYDH3_k127_9486660_1 Cytochrome c - - - 0.000000000000000000000000000000000000000000000000001348 187.0
BYDH3_k127_9486660_2 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. - - - 0.000000000000000000000000000000000000000000000000003569 187.0
BYDH3_k127_9486660_3 Cyclic nucleotide-monophosphate binding domain - - - 0.000000000000000000000000000000000000000373 152.0
BYDH3_k127_9486660_4 Putative metal-binding domain of cation transport ATPase K01533,K17686 - 3.6.3.4,3.6.3.54 0.000000000000000000001914 96.0
BYDH3_k127_9486660_5 cyclic nucleotide-binding K10914 - - 0.00000000000001198 75.0
BYDH3_k127_9486660_6 TIGRFAM cytochrome oxidase maturation protein, cbb3-type - - - 0.00000000004511 64.0
BYDH3_k127_9488202_0 Curli production assembly transport component CsgG K06214 - - 1.587e-197 625.0
BYDH3_k127_9488202_1 WD40-like Beta Propeller Repeat K03641 - - 0.000000000000000000000000000000000000000000000000000000000000000000000007832 250.0
BYDH3_k127_9488202_2 Type VIII secretion system (T8SS), CsgF protein K04338 - - 0.000000000000000000000000000000000000699 140.0
BYDH3_k127_9548874_0 ABC transporter K06158 - - 7.504e-267 831.0
BYDH3_k127_9548874_1 Glucose / Sorbosone dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005762 518.0
BYDH3_k127_9548874_2 PFAM Cytidine and deoxycytidylate deaminase zinc-binding region K01493 - 3.5.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001542 282.0
BYDH3_k127_9548874_3 Protein of unknown function (DUF2911) - - - 0.0000000000000000000000000000000000000000000000000000000000000002864 226.0
BYDH3_k127_9548874_4 - - - - 0.000000000000000000000000000643 119.0
BYDH3_k127_9590197_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951,K01139 - 2.7.6.5,3.1.7.2 0.0 1140.0
BYDH3_k127_9590197_1 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 GO:0000166,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005524,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0030163,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0044238,GO:0051301,GO:0070011,GO:0071704,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575 - 7.033e-226 704.0
BYDH3_k127_9590197_2 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 GO:0003674,GO:0003824,GO:0004019,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046033,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.4 7.094e-202 635.0
BYDH3_k127_9590197_3 Trigger factor K03545 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009524 471.0
BYDH3_k127_9590197_4 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001087 332.0
BYDH3_k127_9590197_5 Belongs to the Fur family K03711 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001923 284.0
BYDH3_k127_9590197_6 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 - 2.4.1.182 0.000000000000000000000000000000000000000000001177 171.0
BYDH3_k127_9590197_7 Belongs to the anti-sigma-factor antagonist family K04749 - - 0.000000000000000000000000000000000000008629 149.0
BYDH3_k127_9590197_8 - - - - 0.00000003469 55.0
BYDH3_k127_9593326_0 permease - - - 2.12e-210 668.0
BYDH3_k127_9593326_1 PFAM FAD dependent oxidoreductase K00285 - 1.4.5.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006957 507.0
BYDH3_k127_9713716_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1592.0
BYDH3_k127_9713716_1 Response regulator of the LytR AlgR family K02477 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000727 373.0
BYDH3_k127_9713716_2 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003704 357.0
BYDH3_k127_9713716_3 - - - - 0.0000000000000000000000000000000000000001079 152.0
BYDH3_k127_9713716_4 Aldo/keto reductase family - - - 0.00000001488 56.0
BYDH3_k127_9786496_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K15726 - - 0.0 1565.0
BYDH3_k127_9786496_1 SMART Elongator protein 3 MiaB NifB - - - 0.000000000000000000000000000000000000000000000000000000000118 205.0
BYDH3_k127_9786496_2 - - - - 0.000000000068 68.0
BYDH3_k127_9801935_0 TonB-dependent Receptor Plug - - - 6.158e-309 966.0
BYDH3_k127_9801935_1 Domain of unknown function (DUF4249) - - - 0.0000000000000000000000000000000000000000000000000000000000000000003447 242.0
BYDH3_k127_9801935_2 Domain of unknown function (DUF4386) - - - 0.00000000000000000000000000000000000000000000008154 172.0
BYDH3_k127_981017_0 COGs COG1368 Phosphoglycerol transferase and related protein alkaline phosphatase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101 402.0
BYDH3_k127_9856212_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.0 1355.0
BYDH3_k127_9856212_1 ABC transporter - - - 2.392e-296 914.0
BYDH3_k127_9856212_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001004 269.0
BYDH3_k127_9856212_3 DoxX K16937 - 1.8.5.2 0.0000000000000000000000000000000000000000000000000000000528 200.0
BYDH3_k127_9856212_4 Oxidoreductase domain protein - - - 0.00000000000000000000000000000000000000000000000652 175.0
BYDH3_k127_9856212_5 protein conserved in bacteria K09859 - - 0.0000000000000000000000000003515 115.0
BYDH3_k127_9856212_6 tetratricopeptide repeat - - - 0.000000000000000006005 96.0
BYDH3_k127_986614_0 translation initiation factor activity K12573 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006454 275.0
BYDH3_k127_986614_1 metallopeptidase activity - - - 0.0000000000000000000000000000000008614 137.0
BYDH3_k127_9919074_0 Amidohydrolase family - - - 2.396e-243 763.0
BYDH3_k127_9919074_1 Sulfatase - - - 0.00000000000000000000000000000000000001628 153.0
BYDH3_k127_9919074_2 Tellurite resistance protein TerB - - - 0.0000000000000000000000000000000007973 131.0
BYDH3_k127_992103_0 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.000000000000000000000000000000000000000000000000000000000000000000001916 238.0
BYDH3_k127_992103_1 Acyl carrier protein phosphodiesterase - - - 0.0000000000000000000000000000000000000000000000000000000005704 208.0
BYDH3_k127_992103_2 - - - - 0.0000000000000000000000000000000000000000000000000002617 186.0
BYDH3_k127_992103_3 - - - - 0.0000000000000000000000006241 109.0
BYDH3_k127_992103_4 Tellurite resistance protein TerB - - - 0.0000000000000000000002543 101.0
BYDH3_k127_992103_5 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 0.000000008318 59.0
BYDH3_k127_9924100_0 Phosphoglucomutase phosphomannomutase alpha beta alpha domain I K01840 - 5.4.2.8 2.84e-207 653.0
BYDH3_k127_9924100_1 PFAM aminotransferase class V K04487 - 2.8.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009552 558.0
BYDH3_k127_9924100_2 PFAM MazG nucleotide pyrophosphohydrolase K02428 - 3.6.1.66 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009254 417.0
BYDH3_k127_9924100_3 PFAM Acetyl-CoA hydrolase transferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002041 360.0
BYDH3_k127_9924100_4 - - - - 0.000000000000000000003003 97.0
BYDH3_k127_9924100_5 4-hydroxybutyrate CoA-transferase - - - 0.0000007989 58.0
BYDH3_k127_9924100_6 AsmA-like C-terminal region - - - 0.000008409 48.0
BYDH3_k127_9950049_0 Aerotolerance regulator N-terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003275 587.0
BYDH3_k127_9950049_1 Enoyl-(Acyl carrier protein) reductase K08081 - 1.1.1.206 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001197 293.0
BYDH3_k127_9950049_2 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.0000000000000000000000000000000000000000000003693 168.0
BYDH3_k127_9950049_3 - - - - 0.000000000000000000000000000000000000003109 149.0
BYDH3_k127_9950049_4 PemK-like, MazF-like toxin of type II toxin-antitoxin system K07171 - - 0.000000000000000000000000000001886 123.0
BYDH3_k127_9950049_5 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0006629 48.0
BYDH3_k127_9971751_0 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 8.633e-223 700.0
BYDH3_k127_9971751_1 Alanine dehydrogenase PNT, N-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002055 503.0
BYDH3_k127_9971751_2 Mitochondrial biogenesis AIM24 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004965 418.0
BYDH3_k127_9971751_3 TIGRFAM endoribonuclease L-PSP K09022 - 3.5.99.10 0.000000000000000000000000000000000000000000000000003818 185.0
BYDH3_k127_9971751_4 NnrU protein - - - 0.00000000000000000000000000000000000001489 153.0
BYDH3_k127_9971751_5 Domain of unknown function (DUF4286) - - - 0.0000000000000000000001426 98.0
BYDH3_k127_9971751_6 - - - - 0.00000000000006155 73.0
BYDH3_k127_9971751_7 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain - - - 0.0000000006729 66.0
BYDH3_k127_999822_0 MacB-like periplasmic core domain - - - 0.0 1176.0
BYDH3_k127_999822_1 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002749 547.0
BYDH3_k127_999822_2 GlcNAc-PI de-N-acetylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006433 439.0
BYDH3_k127_999822_3 Xylose isomerase domain protein TIM barrel - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009037 423.0
BYDH3_k127_999822_4 Carbohydrate family 9 binding domain-like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004412 259.0
BYDH3_k127_999822_5 Alpha/beta hydrolase family K07020 - - 0.000000000000000000000000000000000000000000000000000000000000000000000226 244.0
BYDH3_k127_999822_6 PFAM 6-O-methylguanine DNA methyltransferase, DNA binding domain K10778 - 2.1.1.63 0.00000000000000000000000000000000000000001009 157.0
BYDH3_k127_999822_7 Pyridoxamine 5'-phosphate oxidase K07005 - - 0.0000000000000000000000000000000000004707 144.0
BYDH3_k127_999822_8 6-O-methylguanine DNA methyltransferase, DNA binding domain K10778 - 2.1.1.63 0.000001582 49.0
BYDH3_k127_9999083_0 TIGRFAM capsular exopolysaccharide family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000341 587.0
BYDH3_k127_9999083_1 capsular polysaccharide biosynthesis protein K01104 - 3.1.3.48 0.000000000000000000000000000000000000000000000000000000000000000000002061 243.0
BYDH3_k127_9999083_2 NAD dependent epimerase dehydratase family K00091 - 1.1.1.219 0.0000000000000000000000000000007836 125.0