Overview

ID MAG00281
Name CH3_bin.49
Sample SMP0009
Taxonomy
Kingdom Bacteria
Phylum Pseudomonadota
Class Gammaproteobacteria
Order Burkholderiales
Family Nitrosomonadaceae
Genus Nitrosomonas
Species
Assembly information
Completeness (%) 80.45
Contamination (%) 3.46
GC content (%) 45.0
N50 (bp) 9,197
Genome size (bp) 1,973,591

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes2033

Gene name Description KEGG GOs EC E-value Score Sequence
CH3_k127_10020743_0 PFAM Di-haem cytochrome c peroxidase - - - 0.0 1326.0
CH3_k127_10020743_1 Alginate export - - - 0.0 1028.0
CH3_k127_10020743_2 PFAM amidohydrolase - - - 5.047e-230 721.0
CH3_k127_10020743_3 Radical SAM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007184 546.0
CH3_k127_10020743_4 TatD related DNase K03424 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001837 500.0
CH3_k127_10020743_5 Ankyrin repeat K06867 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005356 341.0
CH3_k127_10020743_6 6-pyruvoyl tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009222 305.0
CH3_k127_10020743_7 PEP-CTERM motif - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001528 293.0
CH3_k127_10020743_8 PEP-CTERM motif - - - 0.000000000000000000001979 93.0
CH3_k127_10020743_9 KR domain K00059 - 1.1.1.100 0.000002578 49.0
CH3_k127_10035106_0 PFAM Peptidase M16 K07263 - - 2.131e-257 797.0
CH3_k127_10035106_1 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03110 - - 1.317e-198 621.0
CH3_k127_10035106_2 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes K03089 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006501 521.0
CH3_k127_10035106_3 Part of the ABC transporter FtsEX involved in cellular division K09811 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001697 501.0
CH3_k127_10035106_4 TIGRFAM Cell division ATP-binding protein FtsE K09812 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003461 417.0
CH3_k127_10067055_0 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001307 528.0
CH3_k127_10067055_1 pilus organization - - - 0.000000000000000000000000000000000000000000000000000000000000001328 237.0
CH3_k127_10067055_2 PFAM Peptidase S24 S26A S26B, conserved region K03503 - - 0.00000000000000000000000000000000001015 137.0
CH3_k127_10067322_0 Belongs to the helicase family. UvrD subfamily K03582 - 3.1.11.5 0.0 2022.0
CH3_k127_10067322_1 PD-(D/E)XK nuclease superfamily K01144 - 3.1.11.5 3.413e-305 960.0
CH3_k127_10067322_2 Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions K05524 - - 0.0000000000000000000000000000000000000000000000000000000000000000004296 229.0
CH3_k127_10067322_3 - - - - 0.0000000000000018 76.0
CH3_k127_10086056_0 Cysteine-rich domain - - - 0.0 1306.0
CH3_k127_10086056_1 Ammonium transporter K03320,K06580 - - 2.099e-275 850.0
CH3_k127_10086056_10 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses - - - 0.00000000000000000000000000000000000000000000000000000004509 205.0
CH3_k127_10086056_2 COG1629 Outer membrane receptor proteins, mostly Fe transport K02014 - - 1.077e-270 854.0
CH3_k127_10086056_3 Cobalamin synthesis protein cobW C-terminal domain - - - 7.463e-252 778.0
CH3_k127_10086056_4 Protein of unknown function (DUF1826) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005634 359.0
CH3_k127_10086056_5 Belongs to the MIP aquaporin (TC 1.A.8) family K02440 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001074 357.0
CH3_k127_10086056_6 CNP1-like family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001933 308.0
CH3_k127_10086056_7 Belongs to the Fur family K09823 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002495 293.0
CH3_k127_10086056_8 Rubrerythrin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006851 287.0
CH3_k127_10086056_9 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004866 295.0
CH3_k127_1008779_0 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03106 - 3.6.5.4 3.24e-271 837.0
CH3_k127_1008779_1 PFAM Cytochrome c assembly protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001422 543.0
CH3_k127_1008779_2 Uncharacterized ACR, COG1430 K09005 - - 0.00000000000000000000000000000000000000000000000004505 180.0
CH3_k127_10110922_0 PFAM Peptidase S45, penicillin amidase K01434 - 3.5.1.11 0.0 1420.0
CH3_k127_10110922_1 Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02400 - - 0.0 1283.0
CH3_k127_10110922_10 FlgN protein K02399 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004259 269.0
CH3_k127_10110922_11 PFAM Anti-sigma-28 factor, FlgM K02398 - - 0.00000000000000000000000000000000000000000000000000006674 187.0
CH3_k127_10110922_2 signal recognition particle SRP54 K02404 - - 2.615e-247 766.0
CH3_k127_10110922_3 Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02401 - - 9.235e-218 679.0
CH3_k127_10110922_4 MotA/TolQ/ExbB proton channel family K02556 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001466 483.0
CH3_k127_10110922_5 Protein of unknown function (DUF3025) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001644 479.0
CH3_k127_10110922_6 Membrane MotB of proton-channel complex MotA/MotB K02557 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007687 465.0
CH3_k127_10110922_7 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes K02405 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002349 461.0
CH3_k127_10110922_8 Etoposide-induced protein 2.4 (EI24) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002784 427.0
CH3_k127_10110922_9 Belongs to the ParA family K04562 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002924 384.0
CH3_k127_10197728_0 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 1.515e-278 857.0
CH3_k127_10197728_1 PhoH-like protein K06217 - - 2.206e-197 617.0
CH3_k127_10197728_2 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000225 283.0
CH3_k127_10197728_3 Restriction endonuclease, type I, EcoRI, R subunit Type III, Res subunit, N-terminal K01153 - 3.1.21.3 0.000000000000000000000000000000000000000000000000000000000000002461 218.0
CH3_k127_10197728_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000002477 219.0
CH3_k127_1021898_0 PFAM glycosyl transferase, family 35 K00688 - 2.4.1.1 0.0 1440.0
CH3_k127_1021898_1 Belongs to the bacterial glucokinase family K00845 - 2.7.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005472 599.0
CH3_k127_1021898_2 PFAM Glyoxalase bleomycin resistance protein dioxygenase - - - 0.00000000000000000000000000000000000001773 145.0
CH3_k127_10445155_0 DNA polymerase III K01141 - 3.1.11.1 3.568e-285 878.0
CH3_k127_10445155_1 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 1.041e-254 788.0
CH3_k127_10445155_2 Type II secretory pathway, pseudopilin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002992 379.0
CH3_k127_10445155_3 Prokaryotic N-terminal methylation motif K02456 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001641 316.0
CH3_k127_10445155_4 Endoribonuclease L-PSP - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000117 260.0
CH3_k127_10445155_5 PFAM type II secretion system protein G K02456 - - 0.000000000000000000000000000000000000000000000000000000000000000000000328 239.0
CH3_k127_10445155_6 Belongs to the GSP D family K02453 - - 0.000000000000000000000000000000000000000000000000000000000000103 214.0
CH3_k127_10445155_7 DDE superfamily endonuclease - - - 0.0000000000000000000000001038 108.0
CH3_k127_10445155_8 DDE superfamily endonuclease - - - 0.000000004119 58.0
CH3_k127_10445155_9 Winged helix-turn helix - - - 0.0002036 47.0
CH3_k127_10450012_0 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle K01595 - 4.1.1.31 0.0 1769.0
CH3_k127_10450012_1 PFAM Peptidase M16 K07263 - - 8.483e-258 797.0
CH3_k127_10450012_10 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 - 2.7.1.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001256 345.0
CH3_k127_10450012_11 Conserved hypothetical protein 95 K08316 - 2.1.1.171 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008711 335.0
CH3_k127_10450012_12 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.000000000000000000000000000003656 120.0
CH3_k127_10450012_13 Belongs to the 'phage' integrase family - - - 0.000000000000000000000009769 102.0
CH3_k127_10450012_2 Type II secretion system K02653 - - 1.03e-245 761.0
CH3_k127_10450012_3 HemY protein N-terminus K02498 - - 2.045e-226 704.0
CH3_k127_10450012_4 Oxidoreductase FAD-binding domain K00523 - 1.17.1.1 1.384e-215 671.0
CH3_k127_10450012_5 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 - 2.5.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000236 593.0
CH3_k127_10450012_6 PFAM NAD-dependent epimerase dehydratase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003395 548.0
CH3_k127_10450012_7 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002312 525.0
CH3_k127_10450012_8 Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity K18778 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007565 502.0
CH3_k127_10450012_9 uroporphyrinogen III synthase K01719 - 4.2.1.75 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005355 485.0
CH3_k127_10454923_0 Belongs to the MurCDEF family K01924 - 6.3.2.8 4.302e-292 898.0
CH3_k127_10454923_1 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 3.962e-263 811.0
CH3_k127_10454923_2 Cell wall formation K01921 - 6.3.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002679 578.0
CH3_k127_10454923_3 Cell wall formation K00075 - 1.3.1.98 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000116 453.0
CH3_k127_10454923_4 POTRA domain, FtsQ-type - - - 0.000000000000000000000000000000000000006271 155.0
CH3_k127_10457082_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 GO:0001775,GO:0002376,GO:0003674,GO:0003824,GO:0003883,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006213,GO:0006220,GO:0006221,GO:0006241,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008283,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009163,GO:0009165,GO:0009199,GO:0009201,GO:0009208,GO:0009209,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0015949,GO:0016874,GO:0016879,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0032943,GO:0034404,GO:0034641,GO:0034654,GO:0042098,GO:0042100,GO:0042110,GO:0042113,GO:0042221,GO:0042455,GO:0042493,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045321,GO:0046036,GO:0046131,GO:0046132,GO:0046134,GO:0046390,GO:0046483,GO:0046649,GO:0046651,GO:0050896,GO:0055086,GO:0070661,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.4.2 0.0 1117.0
CH3_k127_10457082_1 argininosuccinate lyase K01755 - 4.3.2.1 5.992e-298 919.0
CH3_k127_10457082_10 - - - - 0.000000000000000000000000000000000000000000000000000000001782 202.0
CH3_k127_10457082_11 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic K05589 - - 0.0000000000000000000000000000000000000000000004097 169.0
CH3_k127_10457082_2 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 GO:0000015,GO:0000287,GO:0003674,GO:0003824,GO:0004634,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005856,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009986,GO:0009987,GO:0016052,GO:0016053,GO:0016310,GO:0016829,GO:0016835,GO:0016836,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0032991,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042802,GO:0042866,GO:0043167,GO:0043169,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046872,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1902494 4.2.1.11 1.343e-265 819.0
CH3_k127_10457082_3 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 2.318e-250 775.0
CH3_k127_10457082_4 diguanylate cyclase K02488 - 2.7.7.65 1.11e-236 736.0
CH3_k127_10457082_5 Fructosamine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003248 539.0
CH3_k127_10457082_6 Belongs to the peptidase M48B family K03799 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001182 533.0
CH3_k127_10457082_7 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004897 417.0
CH3_k127_10457082_8 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004989 365.0
CH3_k127_10457082_9 Endoribonuclease L-PSP K09022 - 3.5.99.10 0.00000000000000000000000000000000000000000000000000000000000000000000003326 242.0
CH3_k127_10517700_0 domain, Protein - - - 7.952e-273 843.0
CH3_k127_10517700_1 PFAM TonB-dependent receptor, beta-barrel - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002004 589.0
CH3_k127_10517700_2 Sodium Bile acid symporter family K03453 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001434 490.0
CH3_k127_10518285_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1542.0
CH3_k127_10518285_1 Sugar (and other) transporter - - - 3.981e-262 811.0
CH3_k127_10526708_0 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 - - 0.0 1115.0
CH3_k127_10526708_1 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 1.166e-264 820.0
CH3_k127_10526708_2 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 - 2.7.4.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002383 403.0
CH3_k127_10526708_3 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K05788 - - 0.000000000000000000000000000000000000000000000000000008653 189.0
CH3_k127_10526708_4 - - - - 0.00000000000000000005284 89.0
CH3_k127_10544997_0 Signal transduction response regulator, receiver K03415 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005079 587.0
CH3_k127_10544997_1 2'-5' RNA ligase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008756 391.0
CH3_k127_10544997_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001281 294.0
CH3_k127_10558_0 Belongs to the IlvD Edd family K01687 - 4.2.1.9 6.173e-228 707.0
CH3_k127_10558_1 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 1.33e-206 642.0
CH3_k127_10558_2 PFAM Aminotransferase, class IV K00824 - 2.6.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007574 552.0
CH3_k127_10558_3 Belongs to the peptidase S11 family K01286,K07258 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000441 516.0
CH3_k127_10558_4 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 - 2.3.1.181 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008114 346.0
CH3_k127_10558_5 OsmC-like protein K07397 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001386 276.0
CH3_k127_10558_6 PFAM Cytochrome c, class I K08738 GO:0005575,GO:0005623,GO:0042597,GO:0044464 - 0.000000000000000000000000000000000000000000000000000005863 190.0
CH3_k127_10558_7 Belongs to the UPF0250 family K09158 - - 0.00000000000000000000000000000000000000000000003818 170.0
CH3_k127_10570738_0 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 0.0 1169.0
CH3_k127_10570738_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005382 271.0
CH3_k127_10570738_2 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.0000000000000000000000000000000000000000000000000000000000002786 213.0
CH3_k127_10570738_3 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.000000000000000000000000006658 111.0
CH3_k127_10570738_4 Belongs to the bacterial ribosomal protein bL34 family K02914 - - 0.00000000000000001581 83.0
CH3_k127_10570738_5 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.000000000000000016 82.0
CH3_k127_10601998_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 0.0 1840.0
CH3_k127_10601998_1 malic enzyme K00029 - 1.1.1.40 0.0 1024.0
CH3_k127_10601998_10 Universal stress protein - - - 0.0000000000000000000000000000000000000004175 149.0
CH3_k127_10601998_2 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0016787,GO:0019538,GO:0019904,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0097718,GO:0140096,GO:1901564 3.4.11.1 2.132e-307 944.0
CH3_k127_10601998_3 Cache domain - - - 1.87e-298 921.0
CH3_k127_10601998_4 TIGRFAM Diguanylate cyclase - - - 9.538e-293 901.0
CH3_k127_10601998_5 TIGRFAM Phosphoserine phosphatase SerB K01079 - 3.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004279 481.0
CH3_k127_10601998_6 PFAM SH3, type 3 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003065 406.0
CH3_k127_10601998_7 COG2346, Truncated hemoglobins K06886 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000139 269.0
CH3_k127_10601998_8 DNA polymerase III (Chi subunit) K02339 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000002806 256.0
CH3_k127_10601998_9 - - - - 0.00000000000000000000000000000000000000000000000007367 179.0
CH3_k127_10603887_0 Belongs to the RNase T2 family K01166 - 3.1.27.1 1.567e-200 628.0
CH3_k127_10603887_1 Cytochrome P460 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005392 415.0
CH3_k127_10603887_2 Regulator of K conductance, C-terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007629 374.0
CH3_k127_10603887_3 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001757 310.0
CH3_k127_10603887_4 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 - - 0.000000000000000000000000000000000000000000000000001858 183.0
CH3_k127_10634324_0 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 1.637e-262 810.0
CH3_k127_10634324_1 Signal transduction histidine kinase K15011 - 2.7.13.3 1.581e-257 796.0
CH3_k127_10634324_2 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 6.81e-211 657.0
CH3_k127_10634324_3 Response regulator receiver K15012 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005552 346.0
CH3_k127_10634324_4 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003701 301.0
CH3_k127_10634324_5 DAHP synthetase I family K03856 - 2.5.1.54 0.000000000001505 67.0
CH3_k127_10756339_0 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 - - 0.0 1116.0
CH3_k127_10756339_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005983 541.0
CH3_k127_10756339_2 MotA/TolQ/ExbB proton channel family K03561 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006115 413.0
CH3_k127_10756339_3 PFAM Glycoside hydrolase, family 19, catalytic K03791 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003689 369.0
CH3_k127_10756339_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002364 279.0
CH3_k127_10756339_5 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004873 249.0
CH3_k127_10756339_6 Biopolymer transport protein ExbD/TolR K03559 - - 0.00000000002752 69.0
CH3_k127_10823866_0 MMPL family K07003 - - 0.0 1542.0
CH3_k127_10823866_1 Selenide, water dikinase K01008 - 2.7.9.3 2.413e-293 902.0
CH3_k127_10823866_2 Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB NOP family K03500 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0031974,GO:0031981,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0046483,GO:0070013,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:1901360 2.1.1.176 1.693e-265 819.0
CH3_k127_10823866_3 Domain of unknown function (DUF3463) - - - 9.498e-247 762.0
CH3_k127_10823866_4 Phosphoribosylformylglycinamidine cyclo-ligase K01933 - 6.3.3.1 1.023e-218 679.0
CH3_k127_10823866_5 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000166 404.0
CH3_k127_10823866_6 Protein of unknown function (DUF3108) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001518 396.0
CH3_k127_10823866_7 MlaC protein K07323 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001701 354.0
CH3_k127_10823866_8 Peptidoglycan-binding domain 1 protein - - - 0.000000000000000000000000000000000000000000000000000000000002209 213.0
CH3_k127_10881633_0 DNA helicase K03654 - 3.6.4.12 0.0 1144.0
CH3_k127_10881633_1 TIGRFAM glutamine synthetase, type I K01915,K20712 GO:0003674,GO:0003824,GO:0006725,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0016866,GO:0034022,GO:0042537,GO:0044237,GO:0050486,GO:0071704,GO:1901360 5.4.4.3,6.3.1.2 1.877e-313 960.0
CH3_k127_10881633_2 Exodeoxyribonuclease III xth K01142 - 3.1.11.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001644 494.0
CH3_k127_10881633_3 nuclear chromosome segregation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003303 391.0
CH3_k127_10881633_4 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005461 327.0
CH3_k127_10881633_5 Domain of unknown function (DUF4124) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002859 254.0
CH3_k127_10881633_6 - - - - 0.0000000000000000000000000000000000000000000000000000000000000518 216.0
CH3_k127_10881633_7 - - - - 0.000000000000000000000000000000008453 126.0
CH3_k127_10888531_0 Amino acid permease K03294 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002193 544.0
CH3_k127_10888531_1 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006834 334.0
CH3_k127_10888531_2 cytochrome C peroxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000005642 232.0
CH3_k127_10888531_3 Conserved repeat domain - - - 0.0000000000000000000000000000000000005142 160.0
CH3_k127_10888531_4 Protein of unknown function (DUF1249) - - - 0.000000000000001526 83.0
CH3_k127_10888531_5 Transposase DDE domain group 1 - - - 0.000000000001366 71.0
CH3_k127_10888531_6 cellulose-binding family II K01179 - 3.2.1.4 0.0000000001526 74.0
CH3_k127_10908265_0 Biotin lipoyl attachment K01941 - 6.3.4.6 2.223e-195 610.0
CH3_k127_10908265_1 Belongs to the class I-like SAM-binding methyltransferase superfamily. TPMT family K00569 - 2.1.1.67 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004164 279.0
CH3_k127_10964577_0 FAD linked oxidases, C-terminal domain K00102,K00104,K03777 - 1.1.2.4,1.1.3.15,1.1.5.12 1.509e-317 972.0
CH3_k127_10964577_1 4Fe-4S double cluster binding domain K11473 - - 4.429e-259 799.0
CH3_k127_10964577_2 SMART Peptidoglycan-binding Lysin subgroup K16291 - - 1.566e-220 687.0
CH3_k127_10964577_3 FAD linked oxidase K00104,K11472 - 1.1.3.15 7.792e-199 623.0
CH3_k127_10964577_4 Carotenoid biosynthesis protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002515 567.0
CH3_k127_10964577_5 PFAM 6-phosphogluconate dehydrogenase, NAD-binding K00042 - 1.1.1.60 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005276 554.0
CH3_k127_10964577_6 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009692 478.0
CH3_k127_10964577_7 Asparaginase K01424,K13051 - 3.4.19.5,3.5.1.1 0.00000000000000000000000000000000000000000000000000000000002994 208.0
CH3_k127_10964577_8 anaerobic respiration K10535 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0006091,GO:0006807,GO:0008150,GO:0008152,GO:0009061,GO:0009987,GO:0015975,GO:0015980,GO:0016491,GO:0016661,GO:0016663,GO:0019329,GO:0019331,GO:0034641,GO:0042597,GO:0044237,GO:0044281,GO:0044464,GO:0045333,GO:0047991,GO:0055114 1.7.2.6 0.0000000000000000000000001696 107.0
CH3_k127_11027900_0 Protein of unknown function (DUF3375) - - - 2.701e-243 758.0
CH3_k127_11027900_1 Protein of unknown function (DUF3617) - - - 0.0000000000000000000000000000005527 121.0
CH3_k127_11027900_2 Domain of unknown function (DUF4194) - - - 0.000000000000000000000000000002064 123.0
CH3_k127_11027900_3 Putative addiction module component - - - 0.000000000007069 66.0
CH3_k127_11027900_4 type iii restriction K01156 - 3.1.21.5 0.000000009354 59.0
CH3_k127_11064301_0 BT1 family - - - 0.0 1033.0
CH3_k127_11064301_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 1.606e-320 983.0
CH3_k127_11064301_10 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 - 2.3.1.234 1.592e-205 641.0
CH3_k127_11064301_11 Belongs to the cysteine synthase cystathionine beta- synthase family K12339 GO:0000003,GO:0000096,GO:0000097,GO:0000902,GO:0000904,GO:0003006,GO:0003674,GO:0003824,GO:0004124,GO:0005488,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005773,GO:0005774,GO:0005777,GO:0005829,GO:0005886,GO:0006082,GO:0006520,GO:0006534,GO:0006535,GO:0006563,GO:0006790,GO:0006807,GO:0007568,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009507,GO:0009532,GO:0009536,GO:0009566,GO:0009567,GO:0009570,GO:0009653,GO:0009826,GO:0009856,GO:0009860,GO:0009932,GO:0009987,GO:0010035,GO:0010038,GO:0016020,GO:0016043,GO:0016049,GO:0016053,GO:0016740,GO:0016765,GO:0019344,GO:0019752,GO:0019842,GO:0019953,GO:0022414,GO:0030154,GO:0030170,GO:0031090,GO:0032501,GO:0032502,GO:0032989,GO:0036094,GO:0040007,GO:0042221,GO:0042579,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0044706,GO:0046394,GO:0046686,GO:0048037,GO:0048046,GO:0048468,GO:0048588,GO:0048589,GO:0048856,GO:0048868,GO:0048869,GO:0050662,GO:0050896,GO:0051704,GO:0060560,GO:0070279,GO:0071704,GO:0071840,GO:0071944,GO:0097159,GO:0098588,GO:0098805,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.5.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001246 571.0
CH3_k127_11064301_12 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001174 553.0
CH3_k127_11064301_13 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001297 542.0
CH3_k127_11064301_14 Short-chain dehydrogenase reductase SDR - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001032 534.0
CH3_k127_11064301_15 TolA C-terminal K03646 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001279 529.0
CH3_k127_11064301_16 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001112 480.0
CH3_k127_11064301_17 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process K03981 - 5.3.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001264 475.0
CH3_k127_11064301_18 NIF3 (NGG1p interacting factor 3) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003107 473.0
CH3_k127_11064301_19 transcriptional regulatory protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001633 459.0
CH3_k127_11064301_2 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 6.685e-293 900.0
CH3_k127_11064301_20 MotA TolQ ExbB proton channel K03562 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001454 430.0
CH3_k127_11064301_21 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0008144,GO:0016829,GO:0016840,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0046872,GO:0046983,GO:0048037,GO:0050662,GO:0051536,GO:0051539,GO:0051540,GO:1901681,GO:1904047 4.3.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001902 429.0
CH3_k127_11064301_22 Belongs to the BI1 family K19416 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000422 399.0
CH3_k127_11064301_23 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) K06920 - 6.3.4.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004324 400.0
CH3_k127_11064301_24 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009964 373.0
CH3_k127_11064301_25 Cytochrome P460 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000455 353.0
CH3_k127_11064301_26 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001671 343.0
CH3_k127_11064301_27 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 - 3.1.22.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002398 322.0
CH3_k127_11064301_28 Belongs to the ompA family K03640 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005538 321.0
CH3_k127_11064301_29 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000238 306.0
CH3_k127_11064301_3 Involved in the TonB-independent uptake of proteins K03641 - - 2.852e-273 842.0
CH3_k127_11064301_30 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001311 288.0
CH3_k127_11064301_31 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02109 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001924 281.0
CH3_k127_11064301_32 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001523 273.0
CH3_k127_11064301_33 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002892 260.0
CH3_k127_11064301_34 4-hydroxybenzoyl-CoA thioesterase K07107 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004661 258.0
CH3_k127_11064301_35 Biopolymer transport protein ExbD TolR K03560 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000009835 246.0
CH3_k127_11064301_36 ATP synthase I chain K02116 - - 0.0000000000000000000000000000000000000000000000000000000000002416 213.0
CH3_k127_11064301_37 - - - - 0.0000000000000000000000000000000000000000000000000000000000107 208.0
CH3_k127_11064301_38 Aldolase K01633 - 1.13.11.81,4.1.2.25,5.1.99.8 0.00000000000000000000000000000000000000000000000000000000002282 207.0
CH3_k127_11064301_39 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 - - 0.000000000000000000000000000000000000000000000005192 172.0
CH3_k127_11064301_4 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042 - 2.3.1.157,2.7.7.23 4.466e-259 803.0
CH3_k127_11064301_40 Competence protein ComEA K02237 - - 0.0000000000000000000000000000000000001568 143.0
CH3_k127_11064301_41 Protein of unknown function (DUF3460) - - - 0.00000000000000000000000000002424 117.0
CH3_k127_11064301_42 - - - - 0.0000000000000000000000005489 105.0
CH3_k127_11064301_43 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 0.000000000000548 68.0
CH3_k127_11064301_44 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 0.000000000118 62.0
CH3_k127_11064301_5 MltA specific insert domain K08304 - - 3.725e-256 790.0
CH3_k127_11064301_6 Belongs to the thiolase family K00626 - 2.3.1.9 1.542e-239 743.0
CH3_k127_11064301_7 Belongs to the peptidase S1C family K04691,K04772 - - 8.154e-226 702.0
CH3_k127_11064301_8 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 7.036e-212 659.0
CH3_k127_11064301_9 TIGRFAM Ubiquinone biosynthesis hydroxylase, UbiH UbiF VisC COQ6 K03185 - - 2.925e-211 657.0
CH3_k127_11136222_0 M3B, thimet oligopeptidase F K01414 - 3.4.24.70 0.0 1336.0
CH3_k127_11136222_1 Dihydroorotase, multifunctional complex type K01465 - 3.5.2.3 8.585e-271 835.0
CH3_k127_11136222_10 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002035 320.0
CH3_k127_11136222_11 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002967 245.0
CH3_k127_11136222_12 Belongs to the ArsC family K00537 - 1.20.4.1 0.000000000000000000000000000000000000000000000000000000000000004444 218.0
CH3_k127_11136222_13 PFAM glycosyl transferase group 1 - - - 0.0000000000000000000000000000000000000000000000000000000144 200.0
CH3_k127_11136222_14 Domain of unknown function (DUF2024) - - - 0.000000000000000000000000000000000000000000000002501 173.0
CH3_k127_11136222_15 Belongs to the bacterial ribosomal protein bS16 family K02959 - - 0.0000000000000000000000000000000000000000000001447 170.0
CH3_k127_11136222_16 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 - - 0.0000000000000000000000000000000000000000000003546 171.0
CH3_k127_11136222_17 Rubredoxin - - - 0.000000000000000001932 85.0
CH3_k127_11136222_18 Pyridine nucleotide-disulphide oxidoreductase K05297,K12265 - 1.18.1.1 0.00000000001923 64.0
CH3_k127_11136222_2 Cysteine-rich domain K11473 - - 1.394e-262 811.0
CH3_k127_11136222_3 Belongs to the ATCase OTCase family K00609 - 2.1.3.2 3.321e-200 624.0
CH3_k127_11136222_4 Belongs to the RNA methyltransferase TrmD family K00554 - 2.1.1.228 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003706 516.0
CH3_k127_11136222_5 MlaA lipoprotein K04754 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009096 479.0
CH3_k127_11136222_6 Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol K06134 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000026 408.0
CH3_k127_11136222_7 Belongs to the UPF0301 (AlgH) family K07735 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002832 360.0
CH3_k127_11136222_8 invasion associated locus B - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001617 336.0
CH3_k127_11136222_9 Phosphoribosyl transferase domain K02825 - 2.4.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003467 329.0
CH3_k127_11249675_0 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 0.0 1349.0
CH3_k127_11249675_1 Signal transduction histidine kinase - - - 0.0 1150.0
CH3_k127_11249675_2 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 2.088e-301 926.0
CH3_k127_11249675_3 Sigma-54 interaction domain - - - 6.48e-261 805.0
CH3_k127_11249675_4 Belongs to the phosphoglycerate kinase family K00927 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.7.2.3 1.293e-246 763.0
CH3_k127_11249675_5 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 GO:0000166,GO:0003674,GO:0003824,GO:0004365,GO:0005488,GO:0008150,GO:0008152,GO:0016491,GO:0016620,GO:0016903,GO:0036094,GO:0043891,GO:0048037,GO:0050662,GO:0051287,GO:0055114,GO:0097159,GO:1901265,GO:1901363 1.2.1.12 1.543e-215 670.0
CH3_k127_11249675_6 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype K01624 - 4.1.2.13 0.0000000000000000000000000000000000000000000000000000008765 192.0
CH3_k127_11368496_0 fatty acid desaturase - - - 4.345e-218 678.0
CH3_k127_11368496_1 VanZ like family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000231 609.0
CH3_k127_11368496_2 Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily K01834 - 5.4.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002759 459.0
CH3_k127_11368496_3 Uracil DNA glycosylase superfamily K03649 - 3.2.2.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007158 303.0
CH3_k127_11368496_4 Histidine triad (HIT) protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000797 279.0
CH3_k127_11368496_5 response regulator containing a CheY-like receiver - - - 0.00000000000000000000000000000000000000000000078 166.0
CH3_k127_11368496_6 PFAM Nucleotidyl transferase - - - 0.00000000000000000000000000001062 117.0
CH3_k127_11371852_0 PFAM Phospholipid glycerol acyltransferase - - - 0.0 1143.0
CH3_k127_11371852_1 EAL domain - - - 0.0 1088.0
CH3_k127_11371852_2 Glycosyl transferase family 1 - - - 2.494e-229 710.0
CH3_k127_11371852_3 Peptidase M14, carboxypeptidase A - - - 3.684e-217 674.0
CH3_k127_11371852_4 PFAM Diacylglycerol kinase, catalytic - - - 1.788e-204 638.0
CH3_k127_11371852_5 Patatin-like phospholipase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002689 580.0
CH3_k127_11371852_6 Calcineurin-like phosphoesterase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009402 562.0
CH3_k127_11371852_7 PFAM Alpha beta hydrolase fold-1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001743 449.0
CH3_k127_11371852_8 SMART ATPase, AAA type, core K01551 - 3.6.3.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002549 331.0
CH3_k127_11371852_9 HicB_like antitoxin of bacterial toxin-antitoxin system - - - 0.0000000000000000000000000000000000000234 143.0
CH3_k127_11379884_0 Putative zinc binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001497 587.0
CH3_k127_11379884_1 cyclopropane-fatty-acyl-phospholipid synthase K00574,K18827 - 2.1.1.294,2.1.1.79,2.7.1.181 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001137 515.0
CH3_k127_11379884_2 3-beta hydroxysteroid dehydrogenase/isomerase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001505 517.0
CH3_k127_11379884_3 COGs COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B gamma epsilon subunits (eIF-2Bgamma eIF-2Bepsilon) K00978 - 2.7.7.33 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003414 411.0
CH3_k127_11379884_4 3-demethylubiquinone-9 3-O-methyltransferase activity K00568,K20444 - 2.1.1.222,2.1.1.64 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004185 417.0
CH3_k127_11379884_5 Capsular exopolysaccharide family K08252,K16692 - 2.7.10.1 0.0000000000000000000000000000000000000000000000000000000000000000289 232.0
CH3_k127_11379884_6 PFAM lipopolysaccharide biosynthesis - - - 0.000000000000000000000000000000000000005923 154.0
CH3_k127_11379884_7 L-2-hydroxyglutarate oxidase LhgO K15736 GO:0000166,GO:0003674,GO:0003824,GO:0003973,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0016614,GO:0016899,GO:0034419,GO:0036094,GO:0043167,GO:0043168,GO:0044424,GO:0044464,GO:0048037,GO:0050660,GO:0050662,GO:0055114,GO:0071944,GO:0097159,GO:1901265,GO:1901363 - 0.00000000000000000000000000001782 118.0
CH3_k127_11390506_0 fatty acid desaturase K00507 - 1.14.19.1 6.4e-257 792.0
CH3_k127_11390506_1 Belongs to the pseudouridine synthase RsuA family K06181 - 5.4.99.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001553 373.0
CH3_k127_11390506_2 YGGT family K02221 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003912 326.0
CH3_k127_11390506_3 Phosphoglycerate mutase family K08296 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001081 270.0
CH3_k127_11390506_4 Belongs to the UPF0235 family K09131 - - 0.000000000000000000000000000000000000000000000000000004379 190.0
CH3_k127_11390506_5 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.000000000000000000000000000000000003652 137.0
CH3_k127_11415938_0 3-hydroxyacyl-CoA dehydrogenase K07516 - 1.1.1.35 0.0 1657.0
CH3_k127_11415938_1 Belongs to the thiolase family K00632 - 2.3.1.16 3.448e-212 661.0
CH3_k127_11415938_2 ArsC family K00537 - 1.20.4.1 0.000000000000001175 76.0
CH3_k127_11454676_0 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.0 1154.0
CH3_k127_11454676_1 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995,K08744 - 2.7.8.41,2.7.8.5 0.00000000000000000000000000000000000000000000000000000000000002041 215.0
CH3_k127_11454676_2 Belongs to the UPF0178 family K09768 - - 0.0000000000000000000000000000000000000000000001872 169.0
CH3_k127_11454676_3 Protein of unknown function (DUF465) K09794 - - 0.0000000000000000000000000000000000000001266 151.0
CH3_k127_11454676_4 Belongs to the UPF0178 family K09768 - - 0.00000000000000000000000004648 108.0
CH3_k127_11501686_0 Cytochrome c-type biogenesis protein CcmF K02198 - - 0.0 1317.0
CH3_k127_11501686_1 MFS_1 like family - - - 1.62e-256 792.0
CH3_k127_11501686_10 oxidoreductase DsbE K02199 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001998 360.0
CH3_k127_11501686_11 subunit of a heme lyase K02200 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004595 307.0
CH3_k127_11501686_12 PFAM Alkyl hydroperoxide reductase K03564 GO:0003674,GO:0003824,GO:0004601,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0008379,GO:0009636,GO:0009987,GO:0016209,GO:0016491,GO:0016684,GO:0019725,GO:0033554,GO:0034599,GO:0042221,GO:0042592,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044464,GO:0045454,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0051920,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1990748 1.11.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005665 297.0
CH3_k127_11501686_13 Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH K02197 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000438 276.0
CH3_k127_11501686_14 Outer membrane lipoprotein Slp family K07285 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001885 277.0
CH3_k127_11501686_15 Antibiotic biosynthesis monooxygenase - - - 0.000000000000000000000000000000000000000000000000000003675 191.0
CH3_k127_11501686_16 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 - 2.1.1.190 0.0000000000000000000000000000000000002803 140.0
CH3_k127_11501686_17 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02196 - - 0.0000000000008281 70.0
CH3_k127_11501686_2 Tetratricopeptide repeat K02200 - - 1.691e-247 768.0
CH3_k127_11501686_3 alcohol dehydrogenase K00001 - 1.1.1.1 6.483e-217 677.0
CH3_k127_11501686_4 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000567 610.0
CH3_k127_11501686_5 alpha/beta hydrolase fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004057 571.0
CH3_k127_11501686_6 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02195 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003615 487.0
CH3_k127_11501686_7 PEP-CTERM motif - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002222 455.0
CH3_k127_11501686_8 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02194 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002582 400.0
CH3_k127_11501686_9 once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system K02193 - 3.6.3.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002607 376.0
CH3_k127_11563944_0 ABC transporter C-terminal domain K15738 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001159 495.0
CH3_k127_11563944_1 PFAM Cytochrome c, class I - - - 0.000000000000000000000000000000000000000000000000000000000007506 207.0
CH3_k127_11563944_2 Cytochrome c, class I - - - 0.000000000000000000000000000000000000000000000000000000000007877 207.0
CH3_k127_11565908_0 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 1.916e-241 747.0
CH3_k127_11565908_1 Sodium:dicarboxylate symporter family K11102 - - 4.294e-237 736.0
CH3_k127_11565908_2 Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen-IX K00228 GO:0003674,GO:0005488,GO:0005515,GO:0042802,GO:0042803,GO:0046983 1.3.3.3 4.203e-205 638.0
CH3_k127_11565908_3 PFAM Metal-dependent phosphohydrolase, HD K01768 - 4.6.1.1 0.000000000000000000000000000000004967 127.0
CH3_k127_11628614_0 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 1.331e-308 948.0
CH3_k127_11628614_1 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929,K15792 - 6.3.2.10,6.3.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000745 269.0
CH3_k127_11641751_0 Belongs to the GPI family K01810 - 5.3.1.9 0.0 1065.0
CH3_k127_11641751_1 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 - 2.4.1.21 5.73e-308 945.0
CH3_k127_11641751_2 Cytochrome c - - - 1.934e-262 809.0
CH3_k127_11671236_0 Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00163 - 1.2.4.1 0.0 1804.0
CH3_k127_11671236_1 Ketoacyl-synthetase C-terminal extension K15676 - - 0.0 1182.0
CH3_k127_11671236_10 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001883 531.0
CH3_k127_11671236_11 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000186 415.0
CH3_k127_11671236_12 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001866 392.0
CH3_k127_11671236_13 Maf-like protein K06287 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002052 385.0
CH3_k127_11671236_14 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 - 2.1.1.177 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001483 299.0
CH3_k127_11671236_15 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.0000000000000000000000000000000000000000000000000000005788 194.0
CH3_k127_11671236_16 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.00000000000000000000000000000000000000000000000000005107 187.0
CH3_k127_11671236_2 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.0 1105.0
CH3_k127_11671236_3 ADP-glyceromanno-heptose 6-epimerase activity - - - 0.0 1037.0
CH3_k127_11671236_4 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 GO:0000096,GO:0000097,GO:0000166,GO:0001666,GO:0002376,GO:0002437,GO:0002439,GO:0002544,GO:0003674,GO:0003824,GO:0004013,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006152,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0006950,GO:0006952,GO:0006954,GO:0006955,GO:0007584,GO:0007610,GO:0007622,GO:0007623,GO:0008150,GO:0008152,GO:0008652,GO:0009056,GO:0009058,GO:0009063,GO:0009066,GO:0009069,GO:0009116,GO:0009119,GO:0009164,GO:0009605,GO:0009628,GO:0009987,GO:0009991,GO:0016053,GO:0016054,GO:0016787,GO:0016801,GO:0016802,GO:0017076,GO:0017144,GO:0019439,GO:0019510,GO:0019752,GO:0030554,GO:0031667,GO:0033353,GO:0034641,GO:0034655,GO:0034656,GO:0036094,GO:0036293,GO:0042219,GO:0042221,GO:0042278,GO:0042454,GO:0042745,GO:0042802,GO:0042995,GO:0043005,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044272,GO:0044273,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046128,GO:0046130,GO:0046394,GO:0046395,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0046700,GO:0048037,GO:0048511,GO:0048512,GO:0050662,GO:0050667,GO:0050896,GO:0051186,GO:0051187,GO:0051287,GO:0055086,GO:0070482,GO:0071268,GO:0071704,GO:0072521,GO:0072523,GO:0097159,GO:0097458,GO:0098604,GO:0120025,GO:1901135,GO:1901136,GO:1901265,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606,GO:1901607,GO:1901657,GO:1901658 3.3.1.1 6.196e-307 942.0
CH3_k127_11671236_5 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 - 2.5.1.6 1.13e-243 754.0
CH3_k127_11671236_6 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00382,K00627 - 1.8.1.4,2.3.1.12 8.512e-242 751.0
CH3_k127_11671236_7 Alpha/beta hydrolase family - - - 4.676e-232 719.0
CH3_k127_11671236_8 Ribonuclease E/G family K08301 - - 9.583e-196 612.0
CH3_k127_11671236_9 Methylenetetrahydrofolate reductase K00297 GO:0000166,GO:0003674,GO:0003824,GO:0004489,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006575,GO:0006725,GO:0006730,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009396,GO:0009987,GO:0016043,GO:0016053,GO:0016491,GO:0016645,GO:0016646,GO:0018130,GO:0019438,GO:0019752,GO:0022607,GO:0034641,GO:0036094,GO:0042398,GO:0042558,GO:0042559,GO:0043167,GO:0043168,GO:0043436,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046653,GO:0046654,GO:0048037,GO:0050660,GO:0050662,GO:0051186,GO:0051188,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:0071949,GO:0097159,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 1.5.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006978 552.0
CH3_k127_11676455_0 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 - - 7.226e-312 957.0
CH3_k127_11676455_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004811 273.0
CH3_k127_11676455_2 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.00000000000000000000000000000000000000000000000000000002905 201.0
CH3_k127_11725545_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1519.0
CH3_k127_11725545_1 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 - - 1.612e-272 839.0
CH3_k127_11725545_2 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 2.075e-245 762.0
CH3_k127_11725545_3 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003415 416.0
CH3_k127_11725545_4 PFAM Endonuclease exonuclease phosphatase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004453 361.0
CH3_k127_11725545_5 Short-chain dehydrogenase reductase SDR - - - 0.00000000000000000000000000000000000005201 142.0
CH3_k127_11725545_6 - - - - 0.000007581 49.0
CH3_k127_11787202_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02621 - - 0.0 1417.0
CH3_k127_11787202_1 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02622 - - 0.0 1216.0
CH3_k127_11787202_2 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766 GO:0000162,GO:0003674,GO:0003824,GO:0004048,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.18 3.485e-202 631.0
CH3_k127_11787202_3 HDOD domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003394 526.0
CH3_k127_11787202_4 Belongs to the TrpC family K01609 GO:0003674,GO:0003824,GO:0004425,GO:0016829,GO:0016830,GO:0016831 4.1.1.48 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005918 501.0
CH3_k127_11796368_0 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K08483 - 2.7.3.9 0.0 1102.0
CH3_k127_11796368_1 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 1.752e-255 789.0
CH3_k127_11796368_2 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 5.753e-248 767.0
CH3_k127_11796368_3 Transfers a succinyl group from succinyl-CoA to L- homoserine, forming succinyl-L-homoserine K00641 - 2.3.1.31 9.867e-248 764.0
CH3_k127_11796368_4 Protein of unknown function (DUF455) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009962 534.0
CH3_k127_11796368_5 PFAM Methionine biosynthesis MetW - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000426 430.0
CH3_k127_11796368_6 PFAM Sulfotransferase K01014 - 2.8.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002096 345.0
CH3_k127_11796368_7 Thioesterase superfamily K10806 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000345 276.0
CH3_k127_11796368_8 system, fructose subfamily IIA component K02821 - 2.7.1.194 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001485 267.0
CH3_k127_11796368_9 PTS HPr component phosphorylation site K11189 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.00000000000000000000000000000002641 127.0
CH3_k127_11824017_0 ATP synthase alpha/beta family, nucleotide-binding domain K02412 - 3.6.3.14 5.927e-293 900.0
CH3_k127_11824017_1 flagellar motor switch protein FliG K02410 - - 2.596e-194 608.0
CH3_k127_11824017_2 Flagellar hook-length control K02414 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005251 526.0
CH3_k127_11824017_3 flagellar assembly protein FliH K02411 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006505 405.0
CH3_k127_11824017_4 Flagellar FliJ protein K02413 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004016 263.0
CH3_k127_11824017_5 The M ring may be actively involved in energy transduction K02409 - - 0.00000000000000000000000000000000000000000000000000000000000000000008106 241.0
CH3_k127_11825218_0 Chromate resistance - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004184 572.0
CH3_k127_11825218_1 NADH ubiquinone oxidoreductase complex i intermediate-associated protein 30 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001168 385.0
CH3_k127_11825218_2 Chromate transporter K07240 - - 0.00000000000000000000000000000000000000497 145.0
CH3_k127_11825218_3 Dak2 K00863,K05878 - 2.7.1.121,2.7.1.28,2.7.1.29,4.6.1.15 0.00000000000000000000000000003526 117.0
CH3_k127_11868082_0 Diguanylate cyclase phosphodiesterase with PAS PAC - - - 0.0 1337.0
CH3_k127_11868082_1 PFAM RIO-like kinase K07178 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001673 540.0
CH3_k127_11868082_2 antibiotic catabolic process - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001868 456.0
CH3_k127_11868082_3 acetyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001865 354.0
CH3_k127_11868082_4 PFAM Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.00000000000000000000000000000000000000005253 151.0
CH3_k127_11868082_5 Putative quorum-sensing-regulated virulence factor K09954 - - 0.00000000000000000000000000000000000000251 146.0
CH3_k127_11871628_0 AcrB/AcrD/AcrF family K03296,K18138 - - 0.0 1889.0
CH3_k127_11871628_1 Belongs to the peptidase S16 family - - - 0.0 1505.0
CH3_k127_11871628_2 PFAM Multicopper oxidase, type - - - 0.0 1111.0
CH3_k127_11871628_3 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735,K13829 - 2.7.1.71,4.2.3.4 0.0 1069.0
CH3_k127_11871628_4 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585,K18094 - - 1.671e-206 648.0
CH3_k127_11871628_5 PFAM multicopper oxidase type 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007647 597.0
CH3_k127_11871628_6 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 - 4.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001618 541.0
CH3_k127_11871628_7 Belongs to the dGTPase family. Type 2 subfamily K01129 - 3.1.5.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001927 507.0
CH3_k127_11871628_8 endonuclease K07451 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005416 293.0
CH3_k127_11871628_9 Predicted integral membrane protein (DUF2269) - - - 0.000000000000004675 75.0
CH3_k127_11897704_0 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase - - - 0.0 2297.0
CH3_k127_11897704_1 Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN NodQ subfamily K00955,K00956 - 2.7.1.25,2.7.7.4 6.928e-269 828.0
CH3_k127_11897704_2 PFAM Alanine dehydrogenase PNT K00324 - 1.6.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002069 332.0
CH3_k127_11897704_3 adenylyltransferase, small subunit K00957 - 2.7.7.4 0.000000000000000002042 84.0
CH3_k127_11913841_0 Pyruvate kinase, barrel domain K00873 - 2.7.1.40 0.0 1059.0
CH3_k127_11913841_1 domain, Protein - - - 1.008e-310 956.0
CH3_k127_11913841_2 Part of the ABC transporter complex PstSACB involved in phosphate import K02040 - - 8.305e-216 671.0
CH3_k127_11913841_3 probably responsible for the translocation of the substrate across the membrane K02037 - - 2.548e-194 607.0
CH3_k127_11913841_4 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009664 552.0
CH3_k127_11913841_5 PFAM binding-protein-dependent transport systems inner membrane component K02038 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001439 539.0
CH3_k127_11913841_6 Esterase-like activity of phytase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000006161 259.0
CH3_k127_11913841_7 Sulfotransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002885 255.0
CH3_k127_11913841_8 Esterase-like activity of phytase - - - 0.000000000000000000000000000000000000000000000000000005375 191.0
CH3_k127_11913841_9 - - - - 0.0000000000000000000000000000000001892 133.0
CH3_k127_11916682_0 TIGRFAM Undecaprenyl-phosphate glucose phosphotransferase, WcaJ K03606 - - 4.093e-239 741.0
CH3_k127_11916682_1 phospholipase Carboxylesterase K06999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001851 427.0
CH3_k127_12088105_0 Tex-like protein N-terminal domain K06959 - - 0.0 1397.0
CH3_k127_12088105_1 Glutaminyl-tRNA synthetase K01886 - 6.1.1.18 0.0 1191.0
CH3_k127_12088105_10 - - - - 0.00000000000000000000000000006273 116.0
CH3_k127_12088105_11 HicB_like antitoxin of bacterial toxin-antitoxin system - - - 0.0000000000000000000000000001823 119.0
CH3_k127_12088105_12 - - - - 0.0000000000000000000000000006158 113.0
CH3_k127_12088105_13 Nucleotidyltransferase domain - - - 0.000000000000000000000794 99.0
CH3_k127_12088105_14 HicA toxin of bacterial toxin-antitoxin, - - - 0.000000000000000000005131 94.0
CH3_k127_12088105_2 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 1.65e-219 683.0
CH3_k127_12088105_3 May be involved in recombination K03554 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002099 577.0
CH3_k127_12088105_4 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006397 299.0
CH3_k127_12088105_5 Protein of unknown function DUF86 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003206 265.0
CH3_k127_12088105_6 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003402 247.0
CH3_k127_12088105_7 Putative prokaryotic signal transducing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000261 224.0
CH3_k127_12088105_8 Domain of unknown function (DUF5062) - - - 0.00000000000000000000000000000000000000000000003547 170.0
CH3_k127_12088105_9 Methyltransferase domain - - - 0.000000000000000000000000000001048 124.0
CH3_k127_12136750_0 Nucleoside H+ symporter K05820 - - 3.002e-248 767.0
CH3_k127_12136750_1 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000179 417.0
CH3_k127_12216844_0 - - - - 3.109e-196 616.0
CH3_k127_12216844_1 PFAM Peptidase S8 S53, subtilisin kexin sedolisin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005598 588.0
CH3_k127_12216844_2 Belongs to the UPF0307 family K09889 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001345 308.0
CH3_k127_12216844_3 modulator of DNA gyrase K03592 - - 0.000000000000000000000000000000001698 130.0
CH3_k127_12256459_0 Diguanylate cyclase phosphodiesterase with PAS PAC sensor(S) - - - 0.0 1253.0
CH3_k127_12256459_1 SMART ATPase, AAA type, core K06148 - - 6.145e-243 753.0
CH3_k127_12256459_2 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008494 513.0
CH3_k127_12256459_3 Ion channel - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007459 285.0
CH3_k127_12274154_0 TIGRFAM Type I secretion membrane fusion protein, HlyD K02022,K12537,K12542 - - 6.417e-271 836.0
CH3_k127_12274154_1 TIGRFAM type I secretion outer membrane protein, TolC K12538 - - 1.185e-258 800.0
CH3_k127_12274154_2 ABC transporter transmembrane region K12536 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000975 585.0
CH3_k127_12283859_0 Molecular chaperone. Has ATPase activity K04079 - - 0.0 1171.0
CH3_k127_12283859_1 Tyrosine recombinase XerD K04763 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006894 576.0
CH3_k127_12283859_2 Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein K03611 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002582 290.0
CH3_k127_12283859_3 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated K00567 - 2.1.1.63 0.000000000000000000003298 99.0
CH3_k127_12367025_0 Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps K04084 - 1.8.1.8 2.18e-211 658.0
CH3_k127_12367025_1 domain, Protein K00703,K07082 - 2.4.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000227 256.0
CH3_k127_12367025_2 protein synthesis factor, GTP-binding K06207 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002253 247.0
CH3_k127_12367025_3 divalent ion tolerance protein K03926 GO:0003674,GO:0005488,GO:0005507,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0043167,GO:0043169,GO:0044424,GO:0044464,GO:0046872,GO:0046914 - 0.000000000000000000000000000000000000000000000000000000000000002028 218.0
CH3_k127_12367025_4 - - - - 0.000000000000000000000000000001647 123.0
CH3_k127_12367516_0 Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor K00254 - 1.3.5.2 2.021e-205 642.0
CH3_k127_12367516_1 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002917 410.0
CH3_k127_12367516_2 Part of a membrane complex involved in electron transport K03616 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003327 411.0
CH3_k127_12367516_3 Domain of unknown function (DUF1841) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001304 273.0
CH3_k127_12367516_4 Cytochrome c, class I - - - 0.00000000000000000000000000000000000000000000000000000000007196 205.0
CH3_k127_12367516_5 May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate K21420 - 2.3.2.29 0.000000000000000000000000000000000000000000000001604 173.0
CH3_k127_12367516_6 PFAM Cytochrome c, class I - - - 0.00000000009308 61.0
CH3_k127_12386356_0 Double sensory domain of two-component sensor kinase - - - 0.0 1472.0
CH3_k127_12386356_1 Beta-Casp domain K07576 - - 0.000000000000000000000000000000000002573 137.0
CH3_k127_12471922_0 Diguanylate cyclase phosphodiesterase with PAS PAC - - - 0.0 1675.0
CH3_k127_12496348_0 Calcineurin-like phosphoesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000416 594.0
CH3_k127_12496348_1 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP K02837 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003024 570.0
CH3_k127_12496348_2 Domain of unknown function (DUF1732) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003846 427.0
CH3_k127_12506938_0 May be involved in recombinational repair of damaged DNA K03631 - - 1.285e-310 958.0
CH3_k127_12506938_1 Catalyzes the ferrous insertion into protoporphyrin IX K01772 - 4.99.1.1,4.99.1.9 6.983e-233 721.0
CH3_k127_12506938_2 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 8.641e-204 636.0
CH3_k127_12506938_3 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002099 577.0
CH3_k127_12506938_4 PFAM Transposase, IS4-like K07481 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004445 312.0
CH3_k127_12506938_5 Small metal-binding protein - - - 0.00000000000000000000000000000000000000000000000000000004088 199.0
CH3_k127_12551747_0 protein synthesis factor, GTP-binding K06207 - - 0.0 1189.0
CH3_k127_12551747_1 WD40-like Beta Propeller Repeat - - - 2.505e-235 730.0
CH3_k127_12634145_0 PFAM Copper resistance D K07245 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001025 398.0
CH3_k127_12634145_1 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007433 325.0
CH3_k127_12634145_2 PFAM Copper resistance protein CopC K07156 - - 0.000000000000000000000000000000000000000000000000000000000000000000001179 237.0
CH3_k127_129142_0 Alpha/beta hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009277 560.0
CH3_k127_129142_1 Transcriptional regulator, LysR K10918,K18900 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006108 392.0
CH3_k127_1291421_0 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007 - 2.7.9.2 0.0 1039.0
CH3_k127_1291421_1 Bacterial regulatory helix-turn-helix protein, lysR family K21703 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001111 501.0
CH3_k127_1300661_0 SMART Diguanylate cyclase K13590 - 2.7.7.65 5.052e-303 935.0
CH3_k127_1300661_1 TIGRFAM Diguanylate cyclase K13590 - 2.7.7.65 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001294 478.0
CH3_k127_1300661_2 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001061 397.0
CH3_k127_1300661_3 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003586 298.0
CH3_k127_1300661_4 PFAM Transposase, IS4-like K07481 - - 0.0000000000000000000001447 99.0
CH3_k127_1375303_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.0 1380.0
CH3_k127_1375303_1 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002233 301.0
CH3_k127_1375303_2 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001303 242.0
CH3_k127_1375303_3 Belongs to the UPF0234 family K09767 - - 0.000000000000000000000000000000000000000000000000000002164 191.0
CH3_k127_1375303_4 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.00000000000000006736 80.0
CH3_k127_1381996_0 Heavy metal transport detoxification protein K17686,K19597 - 3.6.3.54 0.0 1416.0
CH3_k127_1381996_1 Lipocalin-like domain - - - 7.135e-233 722.0
CH3_k127_1381996_10 PFAM Heavy metal transport detoxification protein K07213 - - 0.000000000000000000000000000000004586 128.0
CH3_k127_1381996_11 - - - - 0.000000000002573 66.0
CH3_k127_1381996_2 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005466 494.0
CH3_k127_1381996_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008867 364.0
CH3_k127_1381996_4 Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP K01496,K11755 - 3.5.4.19,3.6.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003134 306.0
CH3_k127_1381996_5 HIT domain K02503 - - 0.0000000000000000000000000000000000000000000000000000000000000000000004651 237.0
CH3_k127_1381996_6 FtsX-like permease family K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000001043 231.0
CH3_k127_1381996_7 phosphoribosyl-ATP diphosphatase activity K01523 - 3.6.1.31 0.00000000000000000000000000000000000000000000000000000000000313 208.0
CH3_k127_1381996_8 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.000000000000000000000000000000000000000000000000000001494 192.0
CH3_k127_1381996_9 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation K03117 - - 0.000000000000000000000000000000000000000000000000002108 186.0
CH3_k127_1433561_0 HTH-like domain K07497 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007106 531.0
CH3_k127_1433561_1 Helix-turn-helix domain of transposase family ISL3 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001086 246.0
CH3_k127_1433561_2 PFAM Transposase IS3 IS911family K07483 - - 0.0000000000000000000000000000000000000000000009475 166.0
CH3_k127_1433561_3 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.000000000000000000000000003678 111.0
CH3_k127_1433561_4 Transposase - - - 0.000000003511 60.0
CH3_k127_1454757_0 Biotin-lipoyl like K01993,K16922 - - 0.0 1044.0
CH3_k127_1454757_1 Dynamin family - - - 3.55e-305 937.0
CH3_k127_1454757_10 Belongs to the GcvT family K06980 - - 2.23e-212 662.0
CH3_k127_1454757_11 NmrA-like family K00091 - 1.1.1.219 4.003e-204 636.0
CH3_k127_1454757_12 Belongs to the glucose-6-phosphate 1-epimerase family K01792 - 5.1.3.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001879 584.0
CH3_k127_1454757_13 MlaD protein K02067 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001052 547.0
CH3_k127_1454757_14 TIGRFAM DNA polymerase III, delta prime subunit K02341 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003316 532.0
CH3_k127_1454757_15 Exodeoxyribonuclease III xth K01142 - 3.1.11.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005243 522.0
CH3_k127_1454757_16 Protein of unknown function (DUF502) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007548 460.0
CH3_k127_1454757_17 Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P) K03414 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003059 445.0
CH3_k127_1454757_18 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000701 374.0
CH3_k127_1454757_19 N-acetylmuramoyl-L-alanine amidase (Family 2) K03806 GO:0000270,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0006022,GO:0006026,GO:0006027,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0008745,GO:0009056,GO:0009057,GO:0009253,GO:0009254,GO:0009392,GO:0016020,GO:0016787,GO:0016810,GO:0016811,GO:0019867,GO:0030203,GO:0043167,GO:0043169,GO:0043170,GO:0046872,GO:0046914,GO:0061783,GO:0071704,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575 3.5.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003563 370.0
CH3_k127_1454757_2 PFAM Major facilitator superfamily K08218 - - 1.563e-278 859.0
CH3_k127_1454757_20 AAA domain, putative AbiEii toxin, Type IV TA system K02065 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008948 352.0
CH3_k127_1454757_21 ABC-type transport auxiliary lipoprotein component K18480 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001498 335.0
CH3_k127_1454757_22 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 - 2.7.4.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008821 300.0
CH3_k127_1454757_23 Response regulator receiver K03413 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000045 252.0
CH3_k127_1454757_24 BrnA antitoxin of type II toxin-antitoxin system - - - 0.00000000000000000000000000000000000000000000000008394 182.0
CH3_k127_1454757_25 Threonylcarbamoyl adenosine biosynthesis protein TsaE K06925 - - 0.0000000000000000000000000000000000000000001753 164.0
CH3_k127_1454757_26 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system K09803 - - 0.0000000000000006559 81.0
CH3_k127_1454757_27 small periplasmic lipoprotein - - - 0.000000000004374 66.0
CH3_k127_1454757_3 Cell wall hydrolase autolysin K01448 - 3.5.1.28 5.12e-268 830.0
CH3_k127_1454757_4 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 1.077e-256 793.0
CH3_k127_1454757_5 Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate K08289 - 2.1.2.2 3.52e-248 767.0
CH3_k127_1454757_6 AFG1-like ATPase K06916 - - 6.947e-243 752.0
CH3_k127_1454757_7 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K18979 - 1.17.99.6 2.171e-240 744.0
CH3_k127_1454757_8 PFAM Squalene phytoene synthase K00801 - 2.5.1.21 3.306e-217 676.0
CH3_k127_1454757_9 Permease MlaE K02066 - - 7.011e-217 676.0
CH3_k127_1472132_0 Arginyl-tRNA synthetase K01887 - 6.1.1.19 0.0 1129.0
CH3_k127_1472132_1 PFAM Metal-dependent hydrolase HDOD - - - 5.678e-297 916.0
CH3_k127_1472132_2 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K01139 - 2.7.6.5,3.1.7.2 4.446e-245 760.0
CH3_k127_1472132_3 Sporulation related domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001529 434.0
CH3_k127_1472132_4 Thiol disulfide interchange protein K03673 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004894 392.0
CH3_k127_1472132_5 Essential for recycling GMP and indirectly, cGMP K00942 - 2.7.4.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001184 385.0
CH3_k127_1472132_6 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002739 304.0
CH3_k127_1472132_7 Specifically methylates the ribose of guanosine 2251 in 23S rRNA K03218 - 2.1.1.185 0.00000000000000000000000000000000000000000000000000000000000003749 214.0
CH3_k127_1472132_8 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 - 2.7.7.6 0.000000000000000000000000000000000006109 137.0
CH3_k127_1487397_0 Patatin-like phospholipase K07001 - - 3.517e-244 755.0
CH3_k127_1487397_1 PFAM Integral membrane protein TerC - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005648 309.0
CH3_k127_1487397_2 Belongs to the peptidase S33 family K01259 - 3.4.11.5 0.00000000000000000000000000026 115.0
CH3_k127_1487397_3 - - - - 0.00000000000000000000000001979 111.0
CH3_k127_1492140_0 pilus assembly protein FimV K08086 - - 0.0 1237.0
CH3_k127_1492140_1 - - - - 0.0 1171.0
CH3_k127_1492140_10 Psort location CytoplasmicMembrane, score 10.00 - - - 3.987e-238 740.0
CH3_k127_1492140_11 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 GO:0003674,GO:0003824,GO:0003862,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006551,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009098,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.85 6.939e-215 668.0
CH3_k127_1492140_12 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001792 571.0
CH3_k127_1492140_13 MotA/TolQ/ExbB proton channel family K02556 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000702 558.0
CH3_k127_1492140_14 Membrane MotB of proton-channel complex MotA/MotB K02557 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001079 553.0
CH3_k127_1492140_15 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002938 530.0
CH3_k127_1492140_16 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 - 5.4.99.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002466 503.0
CH3_k127_1492140_17 tRNA (guanine-N7-)-methyltransferase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002628 441.0
CH3_k127_1492140_18 Belongs to the TrpF family K01817 - 5.3.1.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000219 396.0
CH3_k127_1492140_19 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K01802,K03767,K03768 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009315 374.0
CH3_k127_1492140_2 ABC transporter transmembrane region K06147 - - 0.0 1108.0
CH3_k127_1492140_20 Sporulation related domain K03749 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001429 352.0
CH3_k127_1492140_21 deaminase zinc-binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001685 346.0
CH3_k127_1492140_22 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03768 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004506 324.0
CH3_k127_1492140_23 Colicin V production K03558 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001657 299.0
CH3_k127_1492140_24 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005509 259.0
CH3_k127_1492140_25 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.000000000000000000000000000000000000000000000000000000000000000003922 226.0
CH3_k127_1492140_26 - - - - 0.00000000000000000000000000000000000000000000000000000000001596 206.0
CH3_k127_1492140_27 - - - - 0.00000000000000000000000000325 115.0
CH3_k127_1492140_3 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455 - - 0.0 1055.0
CH3_k127_1492140_4 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 0.0 998.0
CH3_k127_1492140_5 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 - 6.1.1.16 4.805e-290 892.0
CH3_k127_1492140_6 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 GO:0000162,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0042802,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.2.1.20 6.105e-263 810.0
CH3_k127_1492140_7 Belongs to the folylpolyglutamate synthase family K11754 - 6.3.2.12,6.3.2.17 1.777e-260 805.0
CH3_k127_1492140_8 Catalyzes the formation of L-homocysteine from O- succinyl-L-homoserine (OSHS) and hydrogen sulfide K01739,K10764 - 2.5.1.48 4.372e-243 752.0
CH3_k127_1492140_9 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 2.496e-239 740.0
CH3_k127_1519835_0 alpha beta - - - 2.553e-275 848.0
CH3_k127_1519835_1 AAA domain K02450 - - 1.428e-229 715.0
CH3_k127_1519835_2 PFAM Outer membrane protein, OmpA MotB, C-terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001694 329.0
CH3_k127_1519835_3 Protein of unknown function (DUF2798) - - - 0.000000000000000000000000000000000000003278 146.0
CH3_k127_1519835_4 - - - - 0.0000000000000000000000000000009395 120.0
CH3_k127_1519835_5 deaminase zinc-binding - - - 0.000000000000000000000001408 102.0
CH3_k127_1519835_6 PFAM Transposase, IS4-like - - - 0.0000000000000000000271 91.0
CH3_k127_153246_0 PFAM Peptidase M17, leucyl aminopeptidase K01255 - 3.4.11.1 3.056e-303 931.0
CH3_k127_153246_1 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis K00560 - 2.1.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000007781 258.0
CH3_k127_153246_2 Lysin motif K08307 - - 0.000000000000000003115 83.0
CH3_k127_1534790_0 AMP-dependent synthetase - - - 2.307e-303 934.0
CH3_k127_1534790_1 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 2.313e-287 885.0
CH3_k127_1534790_2 PFAM Orn DAP Arg decarboxylase 2 K01586 - 4.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001017 550.0
CH3_k127_1534790_3 Uncharacterized ACR, COG1430 K09005 - - 0.00000000000000000000000000000000000000000000000003814 184.0
CH3_k127_1550296_0 Phosphate transport system permease protein K02038 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001508 579.0
CH3_k127_1550296_1 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003392 575.0
CH3_k127_1550296_2 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002188 504.0
CH3_k127_1550296_3 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008872 458.0
CH3_k127_1550296_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001443 265.0
CH3_k127_1550296_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000002201 235.0
CH3_k127_1550296_6 Preprotein translocase SecG subunit K03075 - - 0.00000000000000000000000000000000000000000000000000000002784 198.0
CH3_k127_1550296_7 PFAM NapC NirT cytochrome c K02569 - - 0.0000000000004818 70.0
CH3_k127_1564867_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 - 2.7.7.6 0.0 2696.0
CH3_k127_1564867_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 - 2.7.7.6 0.0 2640.0
CH3_k127_1564867_2 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 8.603e-255 786.0
CH3_k127_1564867_3 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003491 419.0
CH3_k127_1564867_4 Participates in transcription elongation, termination and antitermination K02601 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001532 355.0
CH3_k127_1564867_5 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007858 312.0
CH3_k127_1564867_6 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000076 279.0
CH3_k127_1564867_7 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.0000000000000000000000000000000000000000000000000000000000125 208.0
CH3_k127_1564867_8 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation K03073 - - 0.000000000000000000000000000000000000000000000000000000002958 200.0
CH3_k127_1564867_9 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation K03073 - - 0.000002578 49.0
CH3_k127_1580060_0 PFAM Prenyltransferase squalene oxidase K06045 - 4.2.1.129,5.4.99.17 0.0 1303.0
CH3_k127_1580060_1 lipid A ABC exporter family, fused ATPase and inner membrane subunits K06147 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001967 486.0
CH3_k127_1580060_2 MlaA lipoprotein K04754 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001076 473.0
CH3_k127_1580060_3 MotA TolQ ExbB proton channel K03561 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001284 385.0
CH3_k127_1580060_4 Phosphorylase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000346 250.0
CH3_k127_1677942_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K15726 - - 0.0 1801.0
CH3_k127_1677942_1 cytochrome C peroxidase - - - 0.0 1311.0
CH3_k127_1677942_10 Glycine-zipper domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002141 240.0
CH3_k127_1677942_11 Protein of unknown function (DUF3579) - - - 0.00000000000000000000000000000000000000000000000000000000000009076 214.0
CH3_k127_1677942_12 - - - - 0.00000000000000000000000000000000000000000000000000000006836 196.0
CH3_k127_1677942_13 - - - - 0.0000000000000000000000000000000000000000000000000001474 188.0
CH3_k127_1677942_14 PFAM Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.000000000000000000000000000000000000000000000000005042 181.0
CH3_k127_1677942_15 - - - - 0.0000000000000000000000000000000000003604 141.0
CH3_k127_1677942_16 PFAM heat shock protein DnaJ K05516 - - 0.00000000000000000000000000004804 116.0
CH3_k127_1677942_18 DDE domain - - - 0.000000000000000002371 86.0
CH3_k127_1677942_2 PFAM Multicopper oxidase, type K04753,K08100,K14588 - 1.3.3.5 0.0 1000.0
CH3_k127_1677942_3 Putative Na+/H+ antiporter - - - 2.763e-261 806.0
CH3_k127_1677942_4 outer membrane efflux protein K15725 - - 3.481e-233 725.0
CH3_k127_1677942_5 Bacterial protein of unknown function (DUF839) K07093 - - 7.781e-228 709.0
CH3_k127_1677942_6 Putative aminopeptidase - - - 5.803e-206 644.0
CH3_k127_1677942_7 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K15727 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000257 612.0
CH3_k127_1677942_8 Protein of unknown function (DUF1499) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006893 408.0
CH3_k127_1677942_9 NUDIX domain K01515 - 3.6.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003415 401.0
CH3_k127_171245_0 TIGRFAM Lipoprotein releasing system, transmembrane protein, LolC E family K09808 - - 8.126e-249 770.0
CH3_k127_171245_2 Formate acetyltransferase K00656 - 2.3.1.54 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000108 503.0
CH3_k127_171245_3 SMART ATPase, AAA type, core K06148 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000543 352.0
CH3_k127_171245_4 Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner K09810 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003584 312.0
CH3_k127_1819031_0 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 1.072e-222 692.0
CH3_k127_1819031_1 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000236 593.0
CH3_k127_1819031_2 Lumazine binding domain K00793 - 2.5.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001838 348.0
CH3_k127_1819031_3 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006586 320.0
CH3_k127_1819031_4 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 - 2.5.1.78 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000812 308.0
CH3_k127_1819031_5 Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG) K01095 - 3.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000001958 248.0
CH3_k127_1819031_6 TIGRFAM Sodium sulphate symporter K11106,K14445 - - 0.000000002524 57.0
CH3_k127_1835583_0 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 0.0 1285.0
CH3_k127_1835583_1 TonB-dependent Receptor Plug Domain K02014 - - 0.0 1147.0
CH3_k127_1835583_10 - - - - 0.000000000000000000000000000000000008748 139.0
CH3_k127_1835583_11 COG2801 Transposase and inactivated derivatives K07497 - - 0.0000000000000003815 79.0
CH3_k127_1835583_2 Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions K21071 - 2.7.1.11,2.7.1.90 2.06e-275 847.0
CH3_k127_1835583_3 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 3.679e-214 666.0
CH3_k127_1835583_4 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001326 515.0
CH3_k127_1835583_5 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.7.4.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007856 419.0
CH3_k127_1835583_6 Putative diguanylate phosphodiesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001324 415.0
CH3_k127_1835583_7 Ferric uptake regulator family K03711 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000009302 258.0
CH3_k127_1835583_8 Modulates RecA activity K03565 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002054 253.0
CH3_k127_1835583_9 - - - - 0.0000000000000000000000000000000000000000000000000000008073 194.0
CH3_k127_1850894_0 PFAM Aminoacyl-tRNA synthetase, class Ib K01867 - 6.1.1.2 2.045e-267 823.0
CH3_k127_1850894_1 PFAM PHP C-terminal K07053 GO:0003674,GO:0003824,GO:0005488,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0030145,GO:0042578,GO:0043167,GO:0043169,GO:0044237,GO:0046872,GO:0046914,GO:0097657 3.1.3.97 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004933 579.0
CH3_k127_1850894_2 Peptidase M50 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005906 428.0
CH3_k127_1850894_3 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004489 405.0
CH3_k127_1850894_4 TIGRFAM Sua5 YciO YrdC YwlC family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001119 305.0
CH3_k127_1850894_5 NnrS protein K07234 - - 0.00000000000000000000000000000000000000000000000000000000007719 203.0
CH3_k127_1850894_6 PFAM NAD-dependent glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.00006318 45.0
CH3_k127_1851418_0 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 5.293e-216 674.0
CH3_k127_1851418_1 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929,K15792 - 6.3.2.10,6.3.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001047 480.0
CH3_k127_1851418_2 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000007523 243.0
CH3_k127_1886943_0 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 2.633e-244 755.0
CH3_k127_1886943_1 Carboxysome Shell Carbonic Anhydrase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005591 600.0
CH3_k127_1886943_2 Phosphorylase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000386 355.0
CH3_k127_1886943_3 Nudix hydrolase K08310 - 3.6.1.67 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006407 274.0
CH3_k127_1886943_4 Proton-conducting membrane transporter K00342 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000003371 263.0
CH3_k127_1892819_0 Molybdopterin oxidoreductase Fe4S4 domain K00336 - 1.6.5.3 0.0 1482.0
CH3_k127_1892819_1 chain 5 L K00341 - 1.6.5.3 0.0 1234.0
CH3_k127_1892819_10 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 - 1.6.5.3 0.0000000000000000000000000000000000000000000000001058 178.0
CH3_k127_1892819_2 NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 7.259e-309 948.0
CH3_k127_1892819_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 - 1.6.5.3 2.263e-293 899.0
CH3_k127_1892819_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 6.085e-250 771.0
CH3_k127_1892819_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 3.812e-226 703.0
CH3_k127_1892819_6 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006802 395.0
CH3_k127_1892819_7 Belongs to the complex I subunit 6 family K00339 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001844 361.0
CH3_k127_1892819_8 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001973 336.0
CH3_k127_1892819_9 Thioredoxin-like [2Fe-2S] ferredoxin K00334 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009599 316.0
CH3_k127_1898790_0 Outer membrane efflux protein - - - 1.074e-237 743.0
CH3_k127_1898790_1 FtsX-like permease family K02004 - - 1.272e-207 649.0
CH3_k127_1898790_2 Biotin-lipoyl like K02005 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001253 568.0
CH3_k127_1898790_3 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000479 414.0
CH3_k127_1898790_4 pilus organization - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001207 312.0
CH3_k127_1898790_5 MafB19-like deaminase K01485 - 3.5.4.1 0.0000000000000000000000000000000000000000000000000000000000000000001298 232.0
CH3_k127_1898790_6 GYD domain - - - 0.00000000000000000000000000000004376 127.0
CH3_k127_1898790_7 ubiquitin - - - 0.0000000000000006394 84.0
CH3_k127_1898790_8 PFAM Transposase, IS4-like K07481 - - 0.00000000000006589 71.0
CH3_k127_1898790_9 - - - - 0.00000000000008366 75.0
CH3_k127_1899678_0 Catalyzes cross-linking of the peptidoglycan cell wall at the division septum K03587 - 3.4.16.4 0.0 1115.0
CH3_k127_1899678_1 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 - 2.1.1.199 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009794 380.0
CH3_k127_1899678_2 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic K03586 - - 0.0000000000000000000000000000000000000000000000000003243 185.0
CH3_k127_1916103_0 TPM domain K06872 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004194 470.0
CH3_k127_1916103_1 LemA family K03744 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004867 384.0
CH3_k127_1916103_2 HupE UreJ protein K03192 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000243 330.0
CH3_k127_1916103_3 TPM domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001655 302.0
CH3_k127_1916103_4 hydrogenase maturation protease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005967 262.0
CH3_k127_1916103_5 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000007287 247.0
CH3_k127_1916103_6 Probably plays a role in a hydrogenase nickel cofactor insertion step K04651 - - 0.000000000000000000000000000000000000000000000000000000000002225 209.0
CH3_k127_1916103_7 CobW/HypB/UreG, nucleotide-binding domain K04652 - - 0.000000000000000000005991 92.0
CH3_k127_1916103_8 TIGRFAM Undecaprenyl-phosphate glucose phosphotransferase, WcaJ K03606 - - 0.000000000000000000007449 91.0
CH3_k127_1940567_0 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype K01624 - 4.1.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000955 607.0
CH3_k127_1940567_1 Belongs to the acetyltransferase family. ArgA subfamily K14682 - 2.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002764 500.0
CH3_k127_1940567_2 Domain of unknown function (DUF4357) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004485 287.0
CH3_k127_1940567_3 Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes - - - 0.000000000000000000000000000000000000000000000000000001016 192.0
CH3_k127_1940567_4 Domain of unknown function (DUF4357) - - - 0.00000000000000017 80.0
CH3_k127_1940879_0 AMP-dependent synthetase K01897 - 6.2.1.3 0.0 1089.0
CH3_k127_1940879_1 HNH nucleases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001208 243.0
CH3_k127_1953850_0 PFAM Glycosyl transferase, family 2 K00721,K00786 - 2.4.1.83 0.0 1632.0
CH3_k127_1953850_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K15727 - - 2.609e-263 816.0
CH3_k127_1953850_10 Belongs to the multicopper oxidase YfiH RL5 family K05810 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008953 481.0
CH3_k127_1953850_11 Short-chain dehydrogenase reductase SDR K00059 GO:0003674,GO:0003824,GO:0006725,GO:0008150,GO:0008152,GO:0009987,GO:0010130,GO:0016043,GO:0016491,GO:0016614,GO:0016616,GO:0018913,GO:0018915,GO:0022607,GO:0042537,GO:0043933,GO:0044085,GO:0044237,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:1901360 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002739 454.0
CH3_k127_1953850_12 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K15726 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001963 391.0
CH3_k127_1953850_13 Maf-like protein K06287 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000261 355.0
CH3_k127_1953850_14 Uncharacterized ACR, COG1399 K07040 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001807 322.0
CH3_k127_1953850_15 Protein of unknown function (DUF4019) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005485 247.0
CH3_k127_1953850_16 - - - - 0.0000000000000000000000000000000000000000000000000000000000009099 211.0
CH3_k127_1953850_17 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.000000000000000000000000000000000000003621 146.0
CH3_k127_1953850_18 Belongs to the bacterial ribosomal protein bL32 family K02911 - - 0.000000000000000000000000000000001548 129.0
CH3_k127_1953850_2 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K00646,K09458 GO:0003674,GO:0003824,GO:0004312,GO:0004315,GO:0016740,GO:0016746,GO:0016747,GO:0033817 2.3.1.179 1.217e-260 804.0
CH3_k127_1953850_3 outer membrane efflux protein K15725 - - 4.868e-236 739.0
CH3_k127_1953850_4 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 1.43e-214 668.0
CH3_k127_1953850_5 Ankyrin repeat K06867 - - 2.157e-213 665.0
CH3_k127_1953850_6 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 2.484e-204 636.0
CH3_k127_1953850_7 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 1.671e-195 612.0
CH3_k127_1953850_8 malonyl CoA-acyl carrier protein transacylase K00645,K13935,K15355 - 2.3.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007909 556.0
CH3_k127_1953850_9 PFAM Zinc iron permease K16267 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001006 484.0
CH3_k127_1996487_0 CoA binding domain K09181 - - 0.0 1710.0
CH3_k127_1996487_1 extracellular solute-binding protein, family 5 - - - 0.0 1420.0
CH3_k127_1996487_2 Peptidyl-prolyl cis-trans isomerase K03770 - 5.2.1.8 0.0 1140.0
CH3_k127_1996487_3 PFAM binding-protein-dependent transport systems inner membrane component K02033 - - 3.441e-197 616.0
CH3_k127_1996487_4 PFAM histone deacetylase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000318 595.0
CH3_k127_1996487_5 Enoyl- acyl-carrier-protein reductase NADH K00208 - 1.3.1.10,1.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003149 514.0
CH3_k127_1996487_6 - - - - 0.0000000001061 62.0
CH3_k127_2022293_0 Tellurite resistance protein TerB K05801 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003622 492.0
CH3_k127_2022293_1 Transport permease protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004388 467.0
CH3_k127_2022293_2 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001389 400.0
CH3_k127_2022293_3 Belongs to the BolA IbaG family - - - 0.000000000000000000000000000000000000000000001207 165.0
CH3_k127_2022293_4 Transposase IS116/IS110/IS902 family - - - 0.00000000000000000000000000000000000002038 148.0
CH3_k127_2095138_0 Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC - - - 1.181e-273 842.0
CH3_k127_2095138_1 PFAM NAD-dependent epimerase dehydratase K01784 - 5.1.3.2 7.32e-199 620.0
CH3_k127_2095138_10 Glycosyltransferase Family 4 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000686 303.0
CH3_k127_2095138_2 PFAM Glycosyl transferase, family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001744 606.0
CH3_k127_2095138_3 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K00058 - 1.1.1.399,1.1.1.95 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004325 569.0
CH3_k127_2095138_4 O-Antigen ligase K02847 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009902 542.0
CH3_k127_2095138_5 Methyltransferase FkbM domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003437 509.0
CH3_k127_2095138_6 HpcH/HpaI aldolase/citrate lyase family K01630 - 4.1.2.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004093 501.0
CH3_k127_2095138_7 Cytidylyltransferase K00979 - 2.7.7.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005619 484.0
CH3_k127_2095138_8 Haloacid dehalogenase-like hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004525 398.0
CH3_k127_2095138_9 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase K01057 - 3.1.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001425 392.0
CH3_k127_2126270_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 0.0 1598.0
CH3_k127_2126270_1 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 6.661e-207 646.0
CH3_k127_2126270_2 DEAD-like helicase, N-terminal - - - 0.00000000000000000000000000000000000000000000000007341 177.0
CH3_k127_2169480_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 0.0 1142.0
CH3_k127_2169480_1 Belongs to the prokaryotic GSH synthase family K01920 - 6.3.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000612 523.0
CH3_k127_2169480_2 Glutamate-cysteine ligase K01919 - 6.3.2.2 0.00000000000000000000000000000000000000000000000000001275 188.0
CH3_k127_2169480_3 Cytochrome c - - - 0.0000000000000000000000003258 108.0
CH3_k127_223718_0 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 8.366e-197 614.0
CH3_k127_223718_1 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002427 394.0
CH3_k127_223718_2 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 - 3.1.1.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007068 355.0
CH3_k127_2302738_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03092 - - 1.733e-283 874.0
CH3_k127_2302738_1 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 2.312e-234 726.0
CH3_k127_2302738_2 Catalyzes the phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol K06131 - - 7.072e-211 657.0
CH3_k127_2302738_3 Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr) K06023 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006111 602.0
CH3_k127_2302738_4 Branched-chain amino acid ATP-binding cassette transporter K06861 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000508 460.0
CH3_k127_2302738_5 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 - 2.5.1.129 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002252 395.0
CH3_k127_2302738_6 Lipopolysaccharide-assembly, LptC-related K11719 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002623 346.0
CH3_k127_2302738_7 Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane K09774 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001487 343.0
CH3_k127_2302738_8 PTS IIA-like nitrogen-regulatory protein PtsN K02806 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001702 245.0
CH3_k127_2302738_9 Sigma 54 modulation protein K05808 - - 0.00000000000000000000000000000000000000000000000000000000008136 207.0
CH3_k127_2310450_0 Protein of unknown function (DUF3570) - - - 0.0 1433.0
CH3_k127_2310450_1 Redoxin domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000006183 228.0
CH3_k127_2310450_2 Domain of unknown function (DUF4266) - - - 0.0000000000000000000000000007984 113.0
CH3_k127_2345611_0 Domain of unknown function (DUF4105) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001718 322.0
CH3_k127_2345611_1 Belongs to the HpcH HpaI aldolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006569 306.0
CH3_k127_2345611_2 Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000009974 273.0
CH3_k127_2345611_3 D-isomer specific 2-hydroxyacid dehydrogenase K12972 - 1.1.1.79,1.1.1.81 0.00000000000000000000000000000000000000000000002732 182.0
CH3_k127_2345611_4 HTH-like domain K07497 - - 0.000000000000000000000002876 111.0
CH3_k127_2345611_5 glycerol-3-phosphate dehydrogenase [NAD(P)+] activity K00057 - 1.1.1.94 0.0000000001592 63.0
CH3_k127_2431587_0 SMART ATPase, AAA type, core K01551 - 3.6.3.16 3.479e-271 838.0
CH3_k127_2431587_1 Involved in arsenical resistance. Thought to form the channel of an arsenite pump K03893 - - 6.96e-240 745.0
CH3_k127_2431587_2 Predicted integral membrane protein (DUF2269) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002269 358.0
CH3_k127_2431587_3 low molecular weight K03741 - 1.20.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008131 303.0
CH3_k127_2431587_4 PFAM Arsenical resistance operon trans-acting repressor ArsD - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001675 239.0
CH3_k127_2431587_5 Regulatory protein ArsR K03892 - - 0.00000000000000000000000000000000000000000000000000000000287 201.0
CH3_k127_2431587_6 PFAM Glyoxalase bleomycin resistance protein dioxygenase - - - 0.0000000000000000000000000000000000000003757 149.0
CH3_k127_2431587_7 PFAM Glyoxalase bleomycin resistance protein dioxygenase - - - 0.0000000000000000000000000001798 117.0
CH3_k127_2613094_0 Belongs to the aspartokinase family K00928 GO:0003674,GO:0003824,GO:0004072,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0019202,GO:0019752,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576 2.7.2.4 8.546e-257 793.0
CH3_k127_2613094_1 A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response - - - 8.555e-208 647.0
CH3_k127_2613094_2 PFAM Class II aldolase adducin K01628 - 4.1.2.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002268 514.0
CH3_k127_2613094_3 OsmC-like protein K06889,K07397 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005647 398.0
CH3_k127_2613094_4 PFAM RNA-binding S4 K04762 - - 0.0000000000000000000000000000000000000000000000000000000000000000002193 231.0
CH3_k127_2613094_5 protein conserved in bacteria K09941 - - 0.0000000000000002528 78.0
CH3_k127_2615484_0 DinB superfamily - - - 0.0 1433.0
CH3_k127_2615484_1 PFAM aminotransferase, class I K00842,K14155 - 4.4.1.8 4.375e-240 745.0
CH3_k127_2615484_10 Las17-binding protein actin regulator - - - 0.00000000000000000000000000000000000000000000000000000003761 201.0
CH3_k127_2615484_11 - - - - 0.00000000000000000000000000000000000000000000000000003145 196.0
CH3_k127_2615484_12 - - - - 0.00000000000000000000000000000000000001027 151.0
CH3_k127_2615484_13 Protein of unknown function (DUF3313) - - - 0.000000000000000000000000000000001208 139.0
CH3_k127_2615484_14 Lysozyme inhibitor LprI - - - 0.00000000000000000000001008 102.0
CH3_k127_2615484_2 Sulfatase K01130 - 3.1.6.1 8.763e-215 673.0
CH3_k127_2615484_3 ydiK promoter presents a PurR sequence, suggesting that its expression is purine-regulated - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000568 509.0
CH3_k127_2615484_4 Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001709 444.0
CH3_k127_2615484_5 Predicted periplasmic protein (DUF2092) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002698 355.0
CH3_k127_2615484_6 Belongs to the ompA family K03286 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002362 308.0
CH3_k127_2615484_7 Uncharacterized protein conserved in bacteria (DUF2064) K09931 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007224 295.0
CH3_k127_2615484_8 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) K07755 - 2.1.1.137 0.000000000000000000000000000000000000000000000000000000000000000000000000000004009 261.0
CH3_k127_2615484_9 Las17-binding protein actin regulator - - - 0.000000000000000000000000000000000000000000000000000000000001446 214.0
CH3_k127_2724723_0 Belongs to the ABC transporter superfamily K02031,K02032 - - 1.373e-243 754.0
CH3_k127_2724723_1 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP K02837 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000106 457.0
CH3_k127_2741783_0 helicase superfamily c-terminal domain K11927 GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008026,GO:0008104,GO:0008150,GO:0008186,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032991,GO:0033036,GO:0035770,GO:0036464,GO:0042623,GO:0043186,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044424,GO:0044444,GO:0044464,GO:0045495,GO:0051179,GO:0060293,GO:0070035,GO:0140098,GO:1990904 3.6.4.13 4.033e-265 819.0
CH3_k127_2741783_1 Pfam:Methyltransf_26 - - - 1.179e-225 702.0
CH3_k127_2741783_2 MazG-like family - - - 0.000000000000000000000000000000000000000000000000000000135 195.0
CH3_k127_2741783_3 Belongs to the 'phage' integrase family - - - 0.0005997 43.0
CH3_k127_2806703_0 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation K00549 - 2.1.1.14 0.0 1295.0
CH3_k127_2806703_1 PFAM TENA THI-4 protein Coenzyme PQQ biosynthesis protein C K06137 - 1.3.3.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002881 443.0
CH3_k127_2905943_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 0.0 1375.0
CH3_k127_2905943_1 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 3.558e-222 692.0
CH3_k127_2905943_2 Domain of unknown function (DUF4440) - - - 0.0000000000000000000000000000000000000000000000000000000000004403 212.0
CH3_k127_2905943_3 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.0000009973 51.0
CH3_k127_2922700_0 flagellar motor switch protein FliM K02416 - - 6.823e-199 621.0
CH3_k127_2922700_1 Plays a role in the flagellum-specific transport system K02419 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008077 482.0
CH3_k127_2922700_2 Role in flagellar biosynthesis K02421 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004079 468.0
CH3_k127_2922700_3 Flagellar motor switch K02417,K03225 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003642 291.0
CH3_k127_2922700_4 Controls the rotational direction of flagella during chemotaxis K02415 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003969 272.0
CH3_k127_2922700_5 Role in flagellar biosynthesis K02420 - - 0.0000000000000000000000000000000000000000000007985 166.0
CH3_k127_2922700_6 Flagellar hook-length control K02414 - - 0.00000000000000000000000000000000000000000001134 163.0
CH3_k127_2922700_7 flagellar biosynthesis protein K02418 - - 0.00000000000000000000000000000000002103 139.0
CH3_k127_2965231_0 Haemolysin-type calcium-binding repeat (2 copies) - - - 0.0 2907.0
CH3_k127_2965231_1 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 6.09e-315 968.0
CH3_k127_2965231_2 RNase_H superfamily - - - 1.364e-232 722.0
CH3_k127_2965231_3 PFAM Metal-dependent phosphohydrolase, HD K01768 - 4.6.1.1 5.022e-218 682.0
CH3_k127_2965231_4 Specifically methylates the 50S ribosomal protein L3 on a specific glutamine residue K07320 - 2.1.1.298 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002221 598.0
CH3_k127_2965231_5 Belongs to the pseudouridine synthase RsuA family K06178 - 5.4.99.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002435 515.0
CH3_k127_2965231_6 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.000000000000000000000000000000000000000000000000000000001042 201.0
CH3_k127_2965231_7 addiction module antidote protein HigA K21498 - - 0.00000000000000000003542 91.0
CH3_k127_3002876_0 PFAM Metal-dependent phosphohydrolase, HD K01768 - 4.6.1.1 3.647e-244 755.0
CH3_k127_3002876_1 Sodium:dicarboxylate symporter family K11102 - - 2.691e-198 620.0
CH3_k127_3002876_2 RIO1 family K07178 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003284 391.0
CH3_k127_3072162_0 Subunit R is required for both nuclease and ATPase activities, but not for modification K01153 - 3.1.21.3 0.0 1023.0
CH3_k127_3072162_1 type II secretion system protein E K02670 - - 5.557e-235 728.0
CH3_k127_3072162_2 HDOD domain - - - 3.216e-229 711.0
CH3_k127_3072162_3 PFAM Type II secretion system protein E K02669,K12203 - - 9.246e-217 674.0
CH3_k127_3088209_0 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01916,K01950 - 6.3.1.5,6.3.5.1 6.992e-320 983.0
CH3_k127_3088209_1 PFAM Peptidase M48 - - - 4.22e-291 897.0
CH3_k127_3088209_2 alpha beta alpha domain I K01835,K01840,K15778 GO:0000271,GO:0000287,GO:0003674,GO:0003824,GO:0004614,GO:0004615,GO:0005488,GO:0005975,GO:0005976,GO:0006082,GO:0006629,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0009058,GO:0009059,GO:0009103,GO:0009243,GO:0009244,GO:0009311,GO:0009312,GO:0009405,GO:0009987,GO:0016051,GO:0016053,GO:0016853,GO:0016866,GO:0016868,GO:0017144,GO:0019752,GO:0033692,GO:0034637,GO:0034645,GO:0042120,GO:0042121,GO:0043167,GO:0043169,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044281,GO:0044283,GO:0044419,GO:0046394,GO:0046401,GO:0046402,GO:0046872,GO:0051704,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 5.4.2.2,5.4.2.8 1.598e-283 872.0
CH3_k127_3088209_3 MacB-like periplasmic core domain K02004 - - 4.958e-239 741.0
CH3_k127_3088209_4 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 2.854e-207 648.0
CH3_k127_3088209_5 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004954 546.0
CH3_k127_3088209_6 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009198 472.0
CH3_k127_3088209_7 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009086 420.0
CH3_k127_3088209_8 PFAM Exopolysaccharide synthesis, ExoD - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004535 386.0
CH3_k127_3088209_9 Zinc-finger domain - - - 0.00000000000000000000000000000000000001323 145.0
CH3_k127_3175215_0 Putative S-adenosyl-L-methionine-dependent methyltransferase - - - 6.98e-234 729.0
CH3_k127_3175215_1 LppC putative lipoprotein K07121 - - 8.846e-216 676.0
CH3_k127_3175215_10 imidazoleglycerol-phosphate dehydratase K01693 - 4.2.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001279 377.0
CH3_k127_3175215_11 PFAM Transposase, IS4-like K07481 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001892 352.0
CH3_k127_3175215_12 PFAM NAD-dependent epimerase dehydratase K01784 - 5.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001062 299.0
CH3_k127_3175215_13 Protein of unknown function, DUF393 - - - 0.000000000000000000000000000000000000000000000000000000000000000000001338 237.0
CH3_k127_3175215_14 Transposase K07481 - - 0.00000000000000000000000000000000000000000000000000002671 201.0
CH3_k127_3175215_15 - - - - 0.0000000000000000000000000000000000000000000000003107 177.0
CH3_k127_3175215_16 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 GO:0000105,GO:0000162,GO:0003674,GO:0003824,GO:0003949,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006547,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 - 0.00000000000000000000000000000000000000000000005913 169.0
CH3_k127_3175215_17 Belongs to the UPF0102 family K07460 - - 0.00000000000000000000001325 103.0
CH3_k127_3175215_19 - - - - 0.0000000000000003992 79.0
CH3_k127_3175215_2 Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate K01465 - 3.5.2.3 1.606e-207 647.0
CH3_k127_3175215_3 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 1.712e-207 647.0
CH3_k127_3175215_4 UTP-glucose-1-phosphate uridylyltransferase K00963 - 2.7.7.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006123 573.0
CH3_k127_3175215_5 'signal transduction protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002315 560.0
CH3_k127_3175215_6 TIGRFAM Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 GO:0000105,GO:0000162,GO:0003674,GO:0003824,GO:0003949,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006547,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001044 497.0
CH3_k127_3175215_7 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003471 499.0
CH3_k127_3175215_8 Short-chain dehydrogenase reductase SDR K00059,K03793 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008667,GO:0009058,GO:0009237,GO:0009238,GO:0009239,GO:0009712,GO:0009713,GO:0009987,GO:0016043,GO:0016491,GO:0016627,GO:0016628,GO:0018130,GO:0018958,GO:0019184,GO:0019290,GO:0019438,GO:0019540,GO:0019748,GO:0022607,GO:0034641,GO:0042802,GO:0043043,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044550,GO:0046189,GO:0046483,GO:0051186,GO:0051188,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 1.1.1.100,1.5.1.33 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002387 479.0
CH3_k127_3175215_9 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001578 432.0
CH3_k127_3246594_0 Belongs to the GSP D family K02666 - - 0.0 1210.0
CH3_k127_3246594_1 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00652 - 2.3.1.47 7.915e-210 656.0
CH3_k127_3246594_10 Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide K03216 - 2.1.1.207 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005014 291.0
CH3_k127_3246594_11 PFAM Pilus assembly protein K02665 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000008027 291.0
CH3_k127_3246594_12 PFAM Fimbrial assembly K02663 - - 0.00000000000000000000000000000000000000000000000000002076 188.0
CH3_k127_3246594_13 - - - - 0.000000000000000000000000000000000000002465 147.0
CH3_k127_3246594_14 Domain of unknown function (DUF4177) - - - 0.00000000000000000000000000000000000001705 143.0
CH3_k127_3246594_2 Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism K01012 - 2.8.1.6 1.061e-208 649.0
CH3_k127_3246594_3 Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl- L-methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway K02169 - 2.1.1.197 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001613 583.0
CH3_k127_3246594_4 Phosphoribosyl transferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003301 432.0
CH3_k127_3246594_5 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005804 429.0
CH3_k127_3246594_6 Pilus assembly protein, PilO K02664 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007596 376.0
CH3_k127_3246594_7 Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring K01935 - 6.3.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006756 341.0
CH3_k127_3246594_8 The physiological role of BioH is to remove the methyl group introduced by BioC when the pimeloyl moiety is complete. It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway through the hydrolysis of the ester bonds of pimeloyl-ACP esters K02170 - 3.1.1.85 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003218 338.0
CH3_k127_3246594_9 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002534 309.0
CH3_k127_3283349_0 Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA K03498 - - 4.995e-303 930.0
CH3_k127_3283349_1 TrkA-N domain protein K03499 - - 4.922e-285 878.0
CH3_k127_3283349_2 PFAM Ammonia monooxygenase particulate methane monooxygenase, subunit C K10946 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002397 576.0
CH3_k127_3283349_3 Inositol monophosphatase K01082,K01092 - 3.1.3.25,3.1.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009173 535.0
CH3_k127_3283349_4 Redoxin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005836 388.0
CH3_k127_3283349_5 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004069 357.0
CH3_k127_3283349_6 Response regulator receiver K02657 - - 0.00000000000000000000000000000000000000000000000000000000000000000000004685 242.0
CH3_k127_3311386_0 TIGRFAM Polyphosphate nucleotide phosphotransferase, PPK2 K00937 - 2.7.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006725 467.0
CH3_k127_3311386_3 Transposase IS116/IS110/IS902 family - - - 0.00000000000000000000000000000000000005251 147.0
CH3_k127_3336449_0 Transposase and inactivated derivatives - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001244 473.0
CH3_k127_3336449_1 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000032 448.0
CH3_k127_3336449_2 domain protein - - - 0.000000000000000000000000000000000000000000000005047 185.0
CH3_k127_3336449_3 - - - - 0.000000001427 65.0
CH3_k127_3336449_4 PFAM Integrase, catalytic core - - - 0.0006524 42.0
CH3_k127_3337700_0 RuBisCO catalyzes two reactions the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site K01601 - 4.1.1.39 3.306e-318 975.0
CH3_k127_3337700_1 von Willebrand factor, type A - - - 1.721e-206 643.0
CH3_k127_3337700_2 CbbQ/NirQ/NorQ C-terminal K04748 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007966 545.0
CH3_k127_3337700_3 Bacterial regulatory helix-turn-helix protein, lysR family K21703 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007224 477.0
CH3_k127_3337700_4 ribulose bisphosphate carboxylase, small chain K01602 - 4.1.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000002086 250.0
CH3_k127_3362463_0 TonB-dependent receptor K16090 - - 0.0 1256.0
CH3_k127_3362463_1 - - - - 0.0 1082.0
CH3_k127_3362463_2 Cytidylyltransferase-like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008404 359.0
CH3_k127_3362463_3 2Fe-2S -binding K02192 - - 0.00000000000000000000000000002971 118.0
CH3_k127_3362463_4 Thioredoxin-like domain K03671,K03672 - 1.8.1.8 0.000000000006383 68.0
CH3_k127_3573449_0 Diguanylate cyclase - - - 7.147e-311 958.0
CH3_k127_3573449_1 PFAM aminotransferase, class I K00812 - 2.6.1.1 4.515e-242 749.0
CH3_k127_3573449_2 Functions in complex with FlhD as a master transcriptional regulator that regulates transcription of several flagellar and non-flagellar operons by binding to their promoter region. Activates expression of class 2 flagellar genes, including fliA, which is a flagellum-specific sigma factor that turns on the class 3 genes. Also regulates genes whose products function in a variety of physiological pathways K02402 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002748 351.0
CH3_k127_3573449_3 Functions in complex with FlhC as a master transcriptional regulator that regulates transcription of several flagellar and non-flagellar operons by binding to their promoter region. Activates expression of class 2 flagellar genes, including fliA, which is a flagellum-specific sigma factor that turns on the class 3 genes. Also regulates genes whose products function in a variety of physiological pathways K02403 - - 0.000000000000000000000000000000000000000000000000007818 181.0
CH3_k127_3648122_0 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 - - 0.0 1605.0
CH3_k127_3648122_1 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K07277 - - 0.0 1421.0
CH3_k127_3648122_10 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002441 450.0
CH3_k127_3648122_11 Protein of unknown function (DUF2490) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005473 366.0
CH3_k127_3648122_12 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005482 342.0
CH3_k127_3648122_13 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001544 336.0
CH3_k127_3648122_14 Peptidyl-prolyl cis-trans isomerase K03775 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001496 319.0
CH3_k127_3648122_15 Belongs to the skp family K06142 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001277 289.0
CH3_k127_3648122_16 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 - 4.2.1.59 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002243 287.0
CH3_k127_3648122_17 Cytochrome C oxidase, cbb3-type, subunit III K12263 - - 0.000000000000000000000000000000000000000000000000000006953 190.0
CH3_k127_3648122_2 zinc metalloprotease K11749 - - 1.321e-282 870.0
CH3_k127_3648122_3 Belongs to the anaerobic coproporphyrinogen-III oxidase family - GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006782,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016491,GO:0016627,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0046501,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0051989,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 - 4.975e-275 850.0
CH3_k127_3648122_4 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 1.041e-243 757.0
CH3_k127_3648122_5 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003061 537.0
CH3_k127_3648122_6 Belongs to the CDS family K00981 - 2.7.7.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005882 508.0
CH3_k127_3648122_7 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002649 505.0
CH3_k127_3648122_8 Belongs to the universal ribosomal protein uS2 family K02967 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003343 481.0
CH3_k127_3648122_9 helix_turn_helix, cAMP Regulatory protein K01420 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005724 479.0
CH3_k127_3666212_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0 1617.0
CH3_k127_3666212_1 NlpB/DapX lipoprotein K07287 - - 4.877e-229 711.0
CH3_k127_3666212_2 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005417 579.0
CH3_k127_3666212_3 SMART Diguanylate phosphodiesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004726 539.0
CH3_k127_3669574_0 PFAM Glutaredoxin - - - 6.237e-227 708.0
CH3_k127_3669574_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006514 306.0
CH3_k127_3669574_2 PFAM Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.000000000000000000000000000000000000000000000000005042 181.0
CH3_k127_3669574_3 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 - - 0.0000000000000000000000000000179 117.0
CH3_k127_3669574_4 cytochrome - - - 0.0001073 46.0
CH3_k127_3679801_0 AMP-dependent synthetase K00666 - - 0.0 1183.0
CH3_k127_3679801_1 Catalyzes the transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA K06917 - - 1.216e-208 651.0
CH3_k127_3679801_2 NmrA-like family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002459 563.0
CH3_k127_3679801_3 Membrane - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002563 527.0
CH3_k127_3679801_4 PFAM aminotransferase, class I K00652 - 2.3.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002493 419.0
CH3_k127_3679801_5 Phosphopantetheine attachment site - - - 0.00000000000000000000000000000000000000002357 153.0
CH3_k127_3713715_0 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 - - 0.0 1169.0
CH3_k127_3713715_1 SMART Diguanylate phosphodiesterase - - - 0.0 1082.0
CH3_k127_3713715_2 TIGRFAM RND efflux system, outer membrane lipoprotein, NodT K18139 - - 6.468e-245 762.0
CH3_k127_3713715_3 Specifically methylates the N7 position of guanine in position 527 of 16S rRNA K03501 - 2.1.1.170 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005039 369.0
CH3_k127_3716388_0 TIGRFAM A G-specific adenine glycosylase K03575 - - 1.216e-218 681.0
CH3_k127_3716388_1 Flagellar hook-length control protein FliK - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003157 591.0
CH3_k127_3716388_10 FlhB HrpN YscU SpaS Family K04061 - - 0.000000000000000000000000000000002946 131.0
CH3_k127_3716388_2 Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001317 495.0
CH3_k127_3716388_3 Belongs to the 5-formyltetrahydrofolate cyclo-ligase family K01934 - 6.3.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008234 383.0
CH3_k127_3716388_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008289 324.0
CH3_k127_3716388_5 flagellar protein FliS K02422 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003559 256.0
CH3_k127_3716388_6 Belongs to the 'phage' integrase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000006526 244.0
CH3_k127_3716388_7 Uncharacterised BCR, YnfA/UPF0060 family K09771 - - 0.00000000000000000000000000000000000000000000000000000000000000006585 222.0
CH3_k127_3716388_8 Flagellar protein FliT K02423 - - 0.0000000000000000000000000000000000000000000000000000000000007457 210.0
CH3_k127_3716388_9 PFAM Modulator of Rho-dependent transcription termination K19000 - - 0.0000000000000000000000000000000000000000000158 164.0
CH3_k127_3721036_0 COG2931, RTX toxins and related Ca2 -binding proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001715 321.0
CH3_k127_3721036_1 - - - - 0.00000000000000000000000000000000000202 139.0
CH3_k127_3721036_3 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses - - - 0.0000000107 68.0
CH3_k127_3734495_0 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 1.378e-310 953.0
CH3_k127_3734495_1 membrane K08994 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004325 497.0
CH3_k127_3734495_2 Removes the pyruvyl group from chorismate, with concomitant aromatization of the ring, to provide 4- hydroxybenzoate (4HB) for the ubiquinone pathway K03181 - 4.1.3.40 0.00000000000000000000000000001202 118.0
CH3_k127_3734495_3 - - - - 0.00000000000002488 74.0
CH3_k127_3738890_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001304 395.0
CH3_k127_3738890_2 Rhodanese Homology Domain - - - 0.0000000000000000000000000000000000000000000000000000000000002622 211.0
CH3_k127_3738890_3 - - - - 0.00000000000000000000000000000000000000000000000436 182.0
CH3_k127_3738890_4 Peptidase M4 - - - 0.0000000000000000000000000000505 116.0
CH3_k127_3757895_0 Psort location CytoplasmicMembrane, score 10.00 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007319 419.0
CH3_k127_3757895_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002606 257.0
CH3_k127_3757895_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000009282 210.0
CH3_k127_3757895_3 Transposase K07486 - - 0.00000000000000000000000000000000000000000000000000004414 191.0
CH3_k127_3757895_4 - - - - 0.000000000000000000000000000000000000006386 148.0
CH3_k127_3759415_0 HELICc2 K03722 - 3.6.4.12 0.0 1223.0
CH3_k127_3759415_1 Signal transduction histidine kinase, subgroup 1, dimerisation phosphoacceptor K02668 - 2.7.13.3 0.0 1001.0
CH3_k127_3759415_2 Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group K02259 - - 7.829e-209 650.0
CH3_k127_3759415_3 response regulator receiver K02667 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005928 456.0
CH3_k127_3759415_4 Polyketide cyclase / dehydrase and lipid transport - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004699 311.0
CH3_k127_3759415_5 Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene K03664 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001176 290.0
CH3_k127_3759415_6 Belongs to the UPF0125 (RnfH) family K09801 - - 0.00000000000000000000000000000000000000000001072 164.0
CH3_k127_3759415_7 nuclear chromosome segregation - - - 0.000000000000000000000000000000000000000001338 164.0
CH3_k127_3759415_8 - K06950 - - 0.00000000000000000000000000000000000000649 145.0
CH3_k127_3759415_9 Belongs to the FPP GGPP synthase family K02523 - 2.5.1.90 0.0000000000000000008266 86.0
CH3_k127_3830487_0 Signal transduction histidine kinase K07637 - 2.7.13.3 1.159e-265 821.0
CH3_k127_3830487_1 PFAM Signal transduction response regulator, receiver K07660 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004872 437.0
CH3_k127_3830487_2 peptidase - - - 0.00000000000000000000000000000000000000000000001131 171.0
CH3_k127_3830487_3 membrane - - - 0.000000000000000000000000000000000000000000008462 163.0
CH3_k127_3830487_4 - - - - 0.0000000000000000000000000000000000000000004491 161.0
CH3_k127_3847788_0 Acetyltransferase (GNAT) family - - - 0.0000000000000000000000000000000000000000000000003606 181.0
CH3_k127_3847788_2 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K02479,K07692 - - 0.0000000000000000000000000007976 116.0
CH3_k127_3870407_0 PFAM Copper resistance D K07245 - - 0.0 1312.0
CH3_k127_3870407_1 PFAM aminotransferase, class I K14267 - 2.6.1.17 5.415e-253 781.0
CH3_k127_3870407_10 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002965 294.0
CH3_k127_3870407_11 BON domain K04065 - - 0.000000000000000000000000000000000000000000000000000000000000905 210.0
CH3_k127_3870407_12 - - - - 0.0000000000000000000000000000000000000000000000006961 176.0
CH3_k127_3870407_13 DDE superfamily endonuclease - - - 0.0000000000000000000000000000125 117.0
CH3_k127_3870407_14 Protein of unknown function (DUF2909) - - - 0.00000000000000000000000004793 108.0
CH3_k127_3870407_16 - - - - 0.00000005289 55.0
CH3_k127_3870407_2 DNA polymerase X family K02347 - - 2.329e-243 753.0
CH3_k127_3870407_3 HI0933-like protein K07007 - - 7.406e-232 721.0
CH3_k127_3870407_4 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 - 2.5.1.75 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001232 578.0
CH3_k127_3870407_5 Specifically methylates the adenine in position 2030 of 23S rRNA K07115 - 2.1.1.266 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001086 566.0
CH3_k127_3870407_6 Belongs to the transferase hexapeptide repeat family K00674 - 2.3.1.117 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004503 546.0
CH3_k127_3870407_7 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005885 440.0
CH3_k127_3870407_8 Phosphoribosyl transferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000521 416.0
CH3_k127_3870407_9 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003628 312.0
CH3_k127_389243_0 endonuclease exonuclease phosphatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005179 518.0
CH3_k127_389243_1 - - - - 0.0000000001163 64.0
CH3_k127_3912410_0 Putative diguanylate phosphodiesterase K21023 - 2.7.7.65 0.0 1035.0
CH3_k127_3912410_1 Metal-dependent hydrolase HDOD - - - 2.834e-263 815.0
CH3_k127_3912410_10 manually curated - - - 0.00000000000003256 73.0
CH3_k127_3912410_11 - - - - 0.0000000000001675 72.0
CH3_k127_3912410_12 - - - - 0.0009642 46.0
CH3_k127_3912410_2 Belongs to the UPF0176 family K07146 - - 1.226e-195 610.0
CH3_k127_3912410_3 E3 Ubiquitin ligase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002058 576.0
CH3_k127_3912410_4 SMART HTH transcriptional regulator, Crp K10914 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002747 406.0
CH3_k127_3912410_5 LemA family K03744 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001604 367.0
CH3_k127_3912410_6 CHAD - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001736 301.0
CH3_k127_3912410_7 cytochrome - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002614 293.0
CH3_k127_3912410_8 Domain of unknown function (DUF4156) - - - 0.000000000000000000000000000000000000000000000000000000000000007101 218.0
CH3_k127_3912410_9 - - - - 0.00000000000000000000000000000000000000000000000000000000000001594 216.0
CH3_k127_39319_0 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000005933 245.0
CH3_k127_39319_1 Helix-turn-helix domain - - - 0.0000000000002909 70.0
CH3_k127_39319_2 Flp/Fap pilin component K02651 - - 0.0000000000138 67.0
CH3_k127_4158175_0 Multicopper oxidase type - - - 2.044e-209 655.0
CH3_k127_4158175_1 Protein of unknown function (DUF1566) - - - 0.00000000000000000000000000000000001867 146.0
CH3_k127_4158175_2 Winged helix-turn helix - - - 0.000000000000000000000000000000009744 128.0
CH3_k127_4158175_3 - - - - 0.0000000000000000000002835 100.0
CH3_k127_4159565_0 Required for chromosome condensation and partitioning K03529 - - 1.943e-311 962.0
CH3_k127_4159565_1 Lysin motif K08307 - - 2.08e-258 798.0
CH3_k127_4159565_2 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) K09457 - 1.7.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003265 282.0
CH3_k127_4237175_0 Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen-IX K00228 GO:0003674,GO:0005488,GO:0005515,GO:0042802,GO:0042803,GO:0046983 1.3.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001291 561.0
CH3_k127_4237175_1 Winged helix-turn helix - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001437 509.0
CH3_k127_4237175_2 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003875 303.0
CH3_k127_4404246_0 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 - 6.1.1.20 0.0 1418.0
CH3_k127_4404246_1 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 0.0 1253.0
CH3_k127_4404246_10 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001847 341.0
CH3_k127_4404246_11 helix_turn_helix, mercury resistance - - - 0.000000000000000000000000000000000000000000000000000000000000000000007015 235.0
CH3_k127_4404246_12 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 - - 0.000000000000000000000000000000000000000000000000000000000000000003148 226.0
CH3_k127_4404246_13 Small metal-binding protein - - - 0.000000000000000000000000000000000000000000000000005247 184.0
CH3_k127_4404246_14 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K04764 - - 0.0000000000000000000000000000000000000000000002482 168.0
CH3_k127_4404246_15 Belongs to the bacterial ribosomal protein bL35 family K02916 - - 0.0000000000000000000000000000005404 122.0
CH3_k127_4404246_16 PFAM NapC NirT cytochrome c K02569 - - 0.0000009454 51.0
CH3_k127_4404246_2 Threonine synthase K01733 - 4.2.3.1 1.888e-272 840.0
CH3_k127_4404246_3 PFAM aminotransferase, class I K14260 - 2.6.1.2,2.6.1.66 2.366e-269 830.0
CH3_k127_4404246_4 homoserine dehydrogenase K00003 - 1.1.1.3 3.637e-259 801.0
CH3_k127_4404246_5 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 - 6.1.1.20 6.441e-220 682.0
CH3_k127_4404246_6 Lysin motif K06194 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001166 605.0
CH3_k127_4404246_7 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007239 505.0
CH3_k127_4404246_8 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001713 474.0
CH3_k127_4404246_9 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005048 404.0
CH3_k127_4508458_0 PFAM FAD dependent oxidoreductase K00111 - 1.1.5.3 8.8e-322 987.0
CH3_k127_4508458_1 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 GO:0003674,GO:0003824,GO:0004370,GO:0005975,GO:0006066,GO:0006071,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019751,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0071704,GO:1901615 2.7.1.30 3.358e-213 672.0
CH3_k127_4508458_2 Polysaccharide biosynthesis protein - - - 1.077e-209 653.0
CH3_k127_4508458_3 Glycerophosphoryl diester phosphodiesterase family K01126 - 3.1.4.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001063 463.0
CH3_k127_4508458_4 glycosyl transferase, family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002283 464.0
CH3_k127_4508458_5 Protoglobin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001014 411.0
CH3_k127_4508458_6 Ankyrin repeat K06867 - - 0.000000000000000000000000000006243 118.0
CH3_k127_4595749_0 alpha/beta hydrolase fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003349 572.0
CH3_k127_4595749_1 Protein of unknown function (DUF3465) - - - 0.000000000000000000000000000000000000000000000000000000611 193.0
CH3_k127_4595749_2 Protein of unknown function (DUF3465) - - - 0.000000000000000000000000000000000000000004885 157.0
CH3_k127_4595749_3 Serine aminopeptidase, S33 K06889 - - 0.0001951 44.0
CH3_k127_4596011_0 lipid catabolic process - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009353 347.0
CH3_k127_4596011_1 - - - - 0.0000000000000000001117 92.0
CH3_k127_4599631_0 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 6.314e-217 676.0
CH3_k127_4599631_1 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) K00991,K12506 - 2.7.7.60,4.6.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001549 443.0
CH3_k127_4599631_2 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770,K12506 - 2.7.7.60,4.6.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002139 330.0
CH3_k127_4599631_4 - - - - 0.000000000000000000000000002816 111.0
CH3_k127_468090_0 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004609 511.0
CH3_k127_468090_1 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid K01069 - 3.1.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001133 484.0
CH3_k127_468090_2 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease K02342 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007087 440.0
CH3_k127_468090_3 Esterase PHB depolymerase K03932 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000157 439.0
CH3_k127_468090_4 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03469 - 3.1.26.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002154 310.0
CH3_k127_4683944_0 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 GO:0000105,GO:0003674,GO:0003824,GO:0004399,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019752,GO:0030145,GO:0034641,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046872,GO:0046914,GO:0052803,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.23 3.024e-263 813.0
CH3_k127_4683944_1 Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity K00765 - 2.4.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003464 402.0
CH3_k127_4683944_2 tRNA rRNA methyltransferase, SpoU K03437 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007141 314.0
CH3_k127_4792526_0 FtsX-like permease family K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001046 582.0
CH3_k127_4792526_1 HlyD family secretion protein K02005 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001156 477.0
CH3_k127_4792526_2 - - - - 0.000000000000000000000000000000002498 147.0
CH3_k127_4792526_3 Haemolysin-type calcium-binding repeat (2 copies) - - - 0.00000006907 65.0
CH3_k127_483087_1 Protein of unknown function DUF86 - - - 0.00000000000000000000001163 103.0
CH3_k127_483087_2 nucleotidyltransferase activity - - - 0.0000000000000006559 81.0
CH3_k127_483087_3 Transposase IS200 like - - - 0.0001959 44.0
CH3_k127_4989860_0 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 1.823e-206 642.0
CH3_k127_4989860_1 PFAM Aminotransferase, class IV K00824 - 2.6.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001899 559.0
CH3_k127_4989860_2 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 - 2.3.1.181 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003245 344.0
CH3_k127_4989860_3 OsmC-like protein K07397 - - 0.000000000000000000000000000000000000000000000000000000004384 199.0
CH3_k127_4989860_4 Belongs to the UPF0250 family K09158 - - 0.0000000000000000000000000000000000000000000009026 166.0
CH3_k127_5019275_0 type II secretion system protein E K02454 - - 4.248e-241 746.0
CH3_k127_5019275_1 Protein of unknown function (DUF2442) - - - 0.0000000000000000000000000000000000000000000147 163.0
CH3_k127_5019275_2 addiction module antidote protein HigA K21498 - - 0.000000000000000000000000000000000000000000855 158.0
CH3_k127_5019275_3 RelE-like toxin of type II toxin-antitoxin system HigB K07334 - - 0.000000000000000000000000000000000000995 138.0
CH3_k127_5034025_0 Methionine synthase K00548 - 2.1.1.13 0.0 1622.0
CH3_k127_5034025_1 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.0000000000000001664 80.0
CH3_k127_5034025_2 - - - - 0.000000000004053 68.0
CH3_k127_5034025_4 - - - - 0.0005464 46.0
CH3_k127_5047140_0 PFAM Major facilitator superfamily - - - 4.324e-253 783.0
CH3_k127_5047140_1 Pyridine nucleotide-disulphide oxidoreductase K05297,K12265 - 1.18.1.1 2.133e-221 689.0
CH3_k127_5047140_2 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 2.77e-221 688.0
CH3_k127_5047140_3 Peptidyl-prolyl cis-trans isomerase K03769 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001345 485.0
CH3_k127_5047140_4 probably involved in intracellular septation K06190 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001815 353.0
CH3_k127_5047140_5 Dioxygenase K00449 - 1.13.11.3 0.0000000000000000000000000000000000000000000000000000000008626 203.0
CH3_k127_5047140_6 YCII-related domain K09780 - - 0.0000000000000000000000000000000000000000000000002363 177.0
CH3_k127_5047140_7 PFAM transposase, IS4 family protein K07481 - - 0.00000000000000000000000000000000000006687 147.0
CH3_k127_5079069_0 lipid A ABC exporter family, fused ATPase and inner membrane subunits K06147 - - 2.948e-282 871.0
CH3_k127_5079069_1 TIGRFAM methyltransferase FkbM family - - - 0.00000000000000002226 86.0
CH3_k127_5095426_0 Aconitase C-terminal domain K01681 - 4.2.1.3 0.0 1749.0
CH3_k127_5095426_1 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 0.0 1350.0
CH3_k127_5095426_10 - - - - 0.00001208 48.0
CH3_k127_5095426_11 TIGRFAM phosphate binding protein K02040 - - 0.0005102 43.0
CH3_k127_5095426_2 Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes - - - 0.0 1239.0
CH3_k127_5095426_3 Phosphate-selective porin O and P K07221 - - 3.106e-318 979.0
CH3_k127_5095426_4 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002422 286.0
CH3_k127_5095426_5 Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters K06204 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002111 280.0
CH3_k127_5095426_6 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 - - 0.000000000000000000000000000000000000000000000002501 173.0
CH3_k127_5095426_7 - - - - 0.000000000000000006789 87.0
CH3_k127_5095426_8 - - - - 0.00000002025 55.0
CH3_k127_5095426_9 - - - - 0.000004884 52.0
CH3_k127_5117962_0 PFAM Peptidase S1 S6, chymotrypsin Hap K08070 - 1.3.1.74 5.587e-240 743.0
CH3_k127_5117962_1 PFAM heat shock protein DnaJ K05516 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000015 614.0
CH3_k127_5117962_2 Bacterial protein of unknown function (DUF839) K07093 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001785 388.0
CH3_k127_5117962_3 Thioredoxin-like domain K03671,K03672 - 1.8.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002039 286.0
CH3_k127_5117962_4 MerR HTH family regulatory protein K18997 - - 0.000000000000000000000000000000000000000000000000000003116 191.0
CH3_k127_5152683_0 DNA topoisomerase, type IA, central K03169 - 5.99.1.2 0.0 1640.0
CH3_k127_5152683_1 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA K03500 - 2.1.1.176 2.113e-254 787.0
CH3_k127_5152683_2 Signal transduction histidine kinase - - - 1.538e-218 681.0
CH3_k127_5152683_3 DNA recombination-mediator protein A K04096 - - 2.55e-217 676.0
CH3_k127_5152683_4 Lysin motif - - - 8.419e-211 662.0
CH3_k127_5152683_5 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 - 2.1.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001172 452.0
CH3_k127_5152683_6 Domain of unknown function (DUF4390) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001092 357.0
CH3_k127_5152683_7 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003066 354.0
CH3_k127_5152683_8 Belongs to the Smg family K03747 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001809 313.0
CH3_k127_5152683_9 - - - - 0.00000000000000000000000000000000000000006528 151.0
CH3_k127_5165755_0 Biotin lipoyl attachment K01941 - 6.3.4.6 0.0 1827.0
CH3_k127_5165755_1 Domain of unknown function (DUF1989) K09967 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000186 448.0
CH3_k127_5165755_2 Domain of unknown function (DUF1989) K09967 - - 0.0000000000000000000000000000000000000000000000000000009936 192.0
CH3_k127_5181229_0 SMART Diguanylate phosphodiesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001571 473.0
CH3_k127_5181229_1 PFAM Transposase, IS4-like K07481 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001355 328.0
CH3_k127_5181229_2 transposition K07497 - - 0.0000000001664 63.0
CH3_k127_5283283_0 PFAM Phospholipid glycerol acyltransferase K00655 - 2.3.1.51 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003335 488.0
CH3_k127_5283283_1 Polynucleotide kinase 3 phosphatase K03273 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008270,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0034200,GO:0042578,GO:0043167,GO:0043169,GO:0044237,GO:0046872,GO:0046914 3.1.3.82,3.1.3.83 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006039 359.0
CH3_k127_5283283_2 Protein of unknown function DUF45 K07043 - - 0.00000000000000000000000000000000000000000000000000000000000000003121 224.0
CH3_k127_532038_0 TonB-dependent Receptor Plug Domain K02014 - - 0.0 1322.0
CH3_k127_532038_1 Belongs to the DEAD box helicase family K11927 - 3.6.4.13 6.177e-259 804.0
CH3_k127_532038_2 Glucose / Sorbosone dehydrogenase K21430 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001778 505.0
CH3_k127_532038_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008806 493.0
CH3_k127_532038_4 RES - - - 0.0000000000000008464 78.0
CH3_k127_532038_5 PFAM NapC NirT cytochrome c K02569 - - 0.000001792 50.0
CH3_k127_532038_6 PFAM Integrase, catalytic core K07497 - - 0.0002427 46.0
CH3_k127_5467516_0 TIGRFAM TonB-dependent vitamin B12 receptor K16092 - - 0.0 1179.0
CH3_k127_5467516_1 TIGRFAM Undecaprenyl-phosphate glucose phosphotransferase, WcaJ K03606 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009893 529.0
CH3_k127_5467516_2 phospholipase Carboxylesterase K06999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007388 420.0
CH3_k127_5467516_3 Transglutaminase-like superfamily - - - 0.0000000000000000000000003394 107.0
CH3_k127_5556571_0 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate K00147 GO:0003674,GO:0003824,GO:0004350,GO:0006082,GO:0006520,GO:0006560,GO:0006561,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016491,GO:0016620,GO:0016903,GO:0018130,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.2.1.41 4.769e-253 784.0
CH3_k127_5556571_1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation K00382 GO:0003674,GO:0003824,GO:0004148,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005759,GO:0006082,GO:0006084,GO:0006085,GO:0006086,GO:0006090,GO:0006139,GO:0006163,GO:0006164,GO:0006464,GO:0006637,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0018130,GO:0018335,GO:0019362,GO:0019438,GO:0019538,GO:0019637,GO:0019693,GO:0019752,GO:0031974,GO:0031981,GO:0032787,GO:0032991,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0035383,GO:0035384,GO:0036211,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043436,GO:0043543,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044272,GO:0044281,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045239,GO:0045240,GO:0045252,GO:0045254,GO:0046390,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0061732,GO:0070013,GO:0071616,GO:0071704,GO:0072521,GO:0072522,GO:0072524,GO:0090407,GO:0106077,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902494,GO:1990204,GO:1990234 1.8.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005092 430.0
CH3_k127_55784_0 type II secretion system protein E K02454 - - 0.0 1083.0
CH3_k127_55784_1 Belongs to the GSP D family K02453 - - 0.0 1019.0
CH3_k127_55784_2 Type II secretion system K02455 - - 4.254e-245 758.0
CH3_k127_55784_3 carbon utilization - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002395 350.0
CH3_k127_55784_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001086 327.0
CH3_k127_55784_5 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001659 302.0
CH3_k127_55784_6 general secretion pathway protein G K02456 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000009425 284.0
CH3_k127_55784_7 Putative neutral zinc metallopeptidase K06973 - - 0.000000000000000000000000000000000001456 138.0
CH3_k127_5614428_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00283 - 1.4.4.2 6.493e-279 857.0
CH3_k127_5614428_1 pfkB family carbohydrate kinase K00852,K00856 - 2.7.1.15,2.7.1.20 1.582e-198 619.0
CH3_k127_5708326_0 Belongs to the glutamate synthase family - - - 6.98e-321 983.0
CH3_k127_5708326_1 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 1.618e-291 895.0
CH3_k127_5708326_2 Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme K02302,K02303 - 1.3.1.76,2.1.1.107,4.99.1.4 2.8e-282 871.0
CH3_k127_5708326_3 TIGRFAM phosphate binding protein K02040 - - 5.564e-201 627.0
CH3_k127_5708326_4 Belongs to the NadC ModD family K00767 - 2.4.2.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001196 459.0
CH3_k127_5708326_5 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 - 2.5.1.15 0.00000000000000000000002877 98.0
CH3_k127_5708326_6 PFAM transposase IS3 IS911 family protein K07483 - - 0.0000000000000000001688 88.0
CH3_k127_5708326_7 SMART Diguanylate phosphodiesterase - - - 0.0000000000002116 70.0
CH3_k127_5721326_0 Outer membrane efflux protein K18139 - - 1.551e-287 885.0
CH3_k127_5721326_1 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 2.231e-237 734.0
CH3_k127_5721326_2 Sulfotransferase family - - - 1.899e-201 627.0
CH3_k127_5721326_3 Sulfatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001506 556.0
CH3_k127_5721326_4 Vacuole effluxer Atg22 like K06902 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001848 370.0
CH3_k127_5721326_5 Belongs to the Nudix hydrolase family. NudJ subfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002544 292.0
CH3_k127_5721326_6 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006365 258.0
CH3_k127_5721326_7 - - - - 0.000000000000000000002719 93.0
CH3_k127_5736693_0 Belongs to the CarB family K01955 - 6.3.5.5 0.0 2072.0
CH3_k127_5736693_1 Cytochrome c1 - - - 0.0 1257.0
CH3_k127_5736693_10 Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit K02427 - 2.1.1.166 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001432 391.0
CH3_k127_5736693_11 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005238 310.0
CH3_k127_5736693_12 Winged helix-turn helix - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001654 303.0
CH3_k127_5736693_13 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002929 295.0
CH3_k127_5736693_14 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000402 292.0
CH3_k127_5736693_15 CRS1_YhbY K07574 - - 0.00000000000000000000000000000000000000000000000000000000002282 207.0
CH3_k127_5736693_16 DDE superfamily endonuclease - - - 0.00000000000000000000000000000000000000005161 151.0
CH3_k127_5736693_19 DDE superfamily endonuclease K07494 - - 0.00000001472 59.0
CH3_k127_5736693_2 TIGRFAM Oxaloacetate decarboxylase, alpha subunit K01960 - 6.4.1.1 0.0 1174.0
CH3_k127_5736693_3 TIGRFAM Acetyl-CoA carboxylase, biotin carboxylase K01959 - 6.4.1.1 3.479e-303 934.0
CH3_k127_5736693_4 Belongs to the 5'-nucleotidase family K01081 - 3.1.3.5 1.356e-279 865.0
CH3_k127_5736693_5 Cytochrome P450 - - - 1.811e-275 848.0
CH3_k127_5736693_6 Belongs to the CarA family K01956 - 6.3.5.5 4.912e-246 761.0
CH3_k127_5736693_7 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009056,GO:0009057,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019538,GO:0030163,GO:0042623,GO:0042802,GO:0043170,GO:0044238,GO:0044464,GO:0070011,GO:0071704,GO:0071944,GO:0140096,GO:1901564,GO:1901565,GO:1901575 - 1.61e-224 696.0
CH3_k127_5736693_8 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006325 580.0
CH3_k127_5736693_9 Mut7-C ubiquitin K09122 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000143 454.0
CH3_k127_5897194_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 0.0 1146.0
CH3_k127_5897194_1 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 0.0 1047.0
CH3_k127_5897194_2 Belongs to the peptidase S1C family K04771 - 3.4.21.107 2.239e-287 885.0
CH3_k127_5897194_3 MucB/RseB C-terminal domain K03598 - - 7.674e-196 612.0
CH3_k127_5897194_4 RNA polymerase sigma factor K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001787 391.0
CH3_k127_5897194_5 Anti sigma-E protein RseA, N-terminal domain K03597 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005858 333.0
CH3_k127_5897194_6 MEKHLA domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002695 272.0
CH3_k127_5897194_7 Glutaredoxin-like domain (DUF836) K00384 - 1.8.1.9 0.000000000000000000000005385 104.0
CH3_k127_5902237_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.0 1319.0
CH3_k127_5902237_1 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.0 1063.0
CH3_k127_5902237_2 Yqey-like protein K09117 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006878 259.0
CH3_k127_5902237_3 - - - - 0.000000000000000000000000000000000000000000000001439 175.0
CH3_k127_5902237_4 Belongs to the bacterial ribosomal protein bS21 family K02970 - - 0.00000000000000000000000000000000003522 134.0
CH3_k127_5902237_5 Phosphate-starvation-inducible E - - - 0.0000000008418 59.0
CH3_k127_6004245_0 Involved in the biosynthesis of porphyrin-containing compound - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002085 559.0
CH3_k127_6004245_1 PFAM formate nitrite transporter K02598,K21993 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004758 504.0
CH3_k127_6004245_2 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.000000000007283 64.0
CH3_k127_6021152_0 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903,K14067 - 6.2.1.5,6.2.1.9 4.559e-246 762.0
CH3_k127_6021152_1 Belongs to the HpcH HpaI aldolase family K01644,K08691 - 4.1.3.24,4.1.3.25,4.1.3.34 9.866e-201 626.0
CH3_k127_6021152_2 ADP-ribosylglycohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000552 572.0
CH3_k127_6021152_3 Belongs to the ParB family K03497 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001163 525.0
CH3_k127_6021152_4 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902,K08692 - 6.2.1.5,6.2.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001742 455.0
CH3_k127_6021152_5 PFAM Cobyrinic acid a,c-diamide synthase K03496 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002502 346.0
CH3_k127_6021152_6 Trm112p-like protein K09791 - - 0.0000000000000000000000000000006062 121.0
CH3_k127_6108172_0 ABC-type branched-chain amino acid transport systems, periplasmic component K01999 - - 1.555e-273 844.0
CH3_k127_6108172_1 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002809 518.0
CH3_k127_6129294_0 PFAM Major facilitator superfamily MFS-1 - - - 7.373e-247 765.0
CH3_k127_6129294_1 Polyphosphate kinase 2 (PPK2) K22468 - 2.7.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000929 575.0
CH3_k127_6129294_2 PIN domain - - - 0.000000000000000000000000000000000003358 137.0
CH3_k127_6270899_0 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00382 GO:0003674,GO:0003824,GO:0004148,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005759,GO:0006082,GO:0006084,GO:0006085,GO:0006086,GO:0006090,GO:0006139,GO:0006163,GO:0006164,GO:0006464,GO:0006637,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0018130,GO:0018335,GO:0019362,GO:0019438,GO:0019538,GO:0019637,GO:0019693,GO:0019752,GO:0031974,GO:0031981,GO:0032787,GO:0032991,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0035383,GO:0035384,GO:0036211,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043436,GO:0043543,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044272,GO:0044281,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045239,GO:0045240,GO:0045252,GO:0045254,GO:0046390,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0061732,GO:0070013,GO:0071616,GO:0071704,GO:0072521,GO:0072522,GO:0072524,GO:0090407,GO:0106077,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902494,GO:1990204,GO:1990234 1.8.1.4 5.114e-261 807.0
CH3_k127_6270899_1 Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide-linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N-acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides K00997,K01207 - 2.7.8.7,3.2.1.52 1.345e-223 694.0
CH3_k127_6270899_2 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007414 556.0
CH3_k127_6270899_3 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001813 550.0
CH3_k127_6270899_4 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 - 2.6.99.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008515 448.0
CH3_k127_6270899_5 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0032296,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363 3.1.26.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000255 447.0
CH3_k127_6270899_6 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.00000000000000000000000000000000000000000000000000000000000000000000001303 242.0
CH3_k127_6270899_7 Domain of unknown function (DUF4845) - - - 0.0000000000000000000000000000000000000000000000000000000002326 204.0
CH3_k127_6270899_8 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 0.0000000000000002048 78.0
CH3_k127_6280410_0 Belongs to the DEAD box helicase family - GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008026,GO:0008104,GO:0008150,GO:0008186,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032991,GO:0033036,GO:0035770,GO:0036464,GO:0042623,GO:0043186,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044424,GO:0044444,GO:0044464,GO:0045495,GO:0051179,GO:0060293,GO:0070035,GO:0140098,GO:1990904 - 2.184e-288 887.0
CH3_k127_6280410_1 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 4.704e-284 874.0
CH3_k127_6280410_10 Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose K01790 - 5.1.3.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003882 357.0
CH3_k127_6280410_11 WYL domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003778 354.0
CH3_k127_6280410_12 Polymer-forming cytoskeletal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000009621 255.0
CH3_k127_6280410_13 - K07039 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002214 267.0
CH3_k127_6280410_14 Required for insertion of 4Fe-4S clusters K15724 - - 0.00000000000000000000000000000000000000000000000000000000000000001286 225.0
CH3_k127_6280410_15 DNA-binding protein VF530 - - - 0.00000000000000000000000000000000000000007411 156.0
CH3_k127_6280410_16 HIRAN - - - 0.0000000000000000000000000000001871 128.0
CH3_k127_6280410_17 Metal dependent phosphohydrolases with conserved 'HD' motif. K07012 - - 0.000000000000000000000000013 115.0
CH3_k127_6280410_18 Protein of unknown function (DUF433) - - - 0.0000000000000000000141 94.0
CH3_k127_6280410_2 PFAM peptidase - - - 3.85e-283 871.0
CH3_k127_6280410_3 ABC transporter K02021,K11085 - - 6.874e-280 869.0
CH3_k127_6280410_4 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 - 6.1.1.1 1.897e-243 754.0
CH3_k127_6280410_5 Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling K09001 - 2.7.1.170 7.964e-213 663.0
CH3_k127_6280410_6 Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis K00973 - 2.7.7.24 7.381e-198 617.0
CH3_k127_6280410_7 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002067 489.0
CH3_k127_6280410_8 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001058 409.0
CH3_k127_6280410_9 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003663 358.0
CH3_k127_6360026_0 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 3.489e-268 828.0
CH3_k127_6360026_1 Belongs to the 'phage' integrase family. XerC subfamily K03733 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003597 556.0
CH3_k127_6360026_2 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008837,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016053,GO:0016853,GO:0016854,GO:0016855,GO:0019752,GO:0036361,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0047661,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.1.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000596 534.0
CH3_k127_6360026_3 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 - 3.4.25.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007928 335.0
CH3_k127_6360026_4 Protein of unknown function, DUF484 K09921 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007478 292.0
CH3_k127_6360026_5 FR47-like protein - - - 0.000000000000000000000000000000000000000000000001326 176.0
CH3_k127_6360026_6 FR47-like protein - - - 0.0000000000000699 71.0
CH3_k127_6363299_0 Belongs to the 'phage' integrase family - - - 2.483e-206 649.0
CH3_k127_6363299_1 HDOD domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002418 491.0
CH3_k127_6363299_10 Prokaryotic dksA/traR C4-type zinc finger - - - 0.0000000002477 63.0
CH3_k127_6363299_11 PFAM Integrase, catalytic core K07497 - - 0.0000171 48.0
CH3_k127_6363299_2 'signal transduction protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003912 357.0
CH3_k127_6363299_3 D5 N terminal like K06919 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000123 287.0
CH3_k127_6363299_4 DNA-binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005151 242.0
CH3_k127_6363299_5 TIGRFAM Addiction module killer protein, HI1419 - - - 0.0000000000000000000000000000000000000000000000000000000000000000002914 229.0
CH3_k127_6363299_6 addiction module antidote protein - - - 0.0000000000000000000000000000000000000000000000000000001035 195.0
CH3_k127_6363299_7 Dienelactone hydrolase family - - - 0.000000000000000000000000000000000000000000000000000001733 191.0
CH3_k127_6363299_8 - - - - 0.00000000000000000000004431 99.0
CH3_k127_6363299_9 Helix-turn-helix K21498 - - 0.0000000000000000004618 88.0
CH3_k127_6373919_0 alpha beta - - - 3.337e-271 836.0
CH3_k127_6373919_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005113 249.0
CH3_k127_6373919_2 PFAM Transposase, IS4-like - - - 0.00000001472 55.0
CH3_k127_6373919_3 Protein of unknown function (DUF3465) - - - 0.000958 45.0
CH3_k127_6377088_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1470.0
CH3_k127_6377088_1 Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP K00763 - 6.3.4.21 6.898e-268 828.0
CH3_k127_6377088_2 ribosomal large subunit export from nucleus - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002242 342.0
CH3_k127_6377088_3 Domain in cystathionine beta-synthase and other proteins. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000288 264.0
CH3_k127_6377088_4 Isochorismatase family K08281 - 3.5.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000002206 242.0
CH3_k127_6377088_6 Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein K03611 - - 0.000001204 51.0
CH3_k127_6378242_0 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K11072 - 3.6.3.31 1.735e-214 668.0
CH3_k127_6378242_1 cytochrome c peroxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009932 472.0
CH3_k127_6378242_2 Domain of unknown function (DUF4372) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009444 369.0
CH3_k127_6378242_3 - - - - 0.0000000000000000000006727 109.0
CH3_k127_639952_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.0 1839.0
CH3_k127_639952_1 Belongs to the peptidase S41A family K03797 - 3.4.21.102 3.857e-293 902.0
CH3_k127_639952_10 One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA K03071 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001057 282.0
CH3_k127_639952_11 Rhodanese Homology Domain K01011 - 2.8.1.1,2.8.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001836 273.0
CH3_k127_639952_12 Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins K03676 - - 0.000000000000000000000000000000000000000000000003173 172.0
CH3_k127_639952_13 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.00000000000000000000000000000000000000000004765 161.0
CH3_k127_639952_14 - - - - 0.000000000000000000000006149 102.0
CH3_k127_639952_15 DDE superfamily endonuclease - - - 0.00000000000000000001387 91.0
CH3_k127_639952_16 - - - - 0.00000000006879 62.0
CH3_k127_639952_17 - - - - 0.000008247 51.0
CH3_k127_639952_2 Peptidase family M23 - - - 1.734e-225 703.0
CH3_k127_639952_3 Glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001911 606.0
CH3_k127_639952_4 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000107 585.0
CH3_k127_639952_5 Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily K01834 - 5.4.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001487 486.0
CH3_k127_639952_6 UBA THIF-type NAD FAD binding K21029 - 2.7.7.80 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006911 444.0
CH3_k127_639952_7 Bacterial regulatory proteins, tetR family K05501 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006912 363.0
CH3_k127_639952_8 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001783 314.0
CH3_k127_639952_9 Bacterial SH3 domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004915 301.0
CH3_k127_6411447_0 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455 - - 0.0 1170.0
CH3_k127_6411447_1 Reutilizes the intact tripeptide L-alanyl-gamma-D- glutamyl-meso-diaminopimelate by linking it to UDP-N- acetylmuramate K02558 - 6.3.2.45 8.938e-253 781.0
CH3_k127_6411447_2 Multicopper oxidase K00368,K08100 - 1.3.3.5,1.7.2.1 1.077e-227 707.0
CH3_k127_6411447_3 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis K00759 GO:0000166,GO:0001775,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0003674,GO:0003824,GO:0003999,GO:0005488,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006807,GO:0006810,GO:0006887,GO:0006955,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0012505,GO:0016192,GO:0016208,GO:0016740,GO:0016757,GO:0016763,GO:0017076,GO:0018130,GO:0019438,GO:0030141,GO:0030554,GO:0031410,GO:0031974,GO:0031981,GO:0031982,GO:0031983,GO:0032553,GO:0032555,GO:0032559,GO:0032940,GO:0034641,GO:0034654,GO:0034774,GO:0036094,GO:0036230,GO:0042119,GO:0043094,GO:0043101,GO:0043167,GO:0043168,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043299,GO:0043312,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044433,GO:0044444,GO:0044446,GO:0044464,GO:0045055,GO:0045321,GO:0046483,GO:0046903,GO:0050896,GO:0051179,GO:0051234,GO:0060205,GO:0070013,GO:0071704,GO:0072521,GO:0072522,GO:0097159,GO:0097367,GO:0097708,GO:0099503,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.4.2.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002502 346.0
CH3_k127_6411447_4 Glutamate-cysteine ligase K01919 - 6.3.2.2 0.0000000004214 60.0
CH3_k127_6413330_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 0.0 1751.0
CH3_k127_6413330_1 DNA polymerase III (Delta subunit) K02340 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001582 604.0
CH3_k127_6413330_2 PFAM Peptidase M48 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000373 302.0
CH3_k127_6413330_3 Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane K03643 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001506 275.0
CH3_k127_6413330_4 ArsC family K00537 - 1.20.4.1 0.00000000000000000000000000000000000000000000000000000000000000003222 224.0
CH3_k127_6413330_5 AraC-like ligand binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000001365 221.0
CH3_k127_6413330_6 Dodecin K09165 - - 0.0000000000000000000000000000000002731 132.0
CH3_k127_6413330_7 Protein of unknown function (DUF3622) - - - 0.00000000000000000000000000001736 119.0
CH3_k127_6413381_0 Belongs to the FAD-dependent oxidoreductase 2 family. FRD SDH subfamily K00239 GO:0000104,GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009055,GO:0009060,GO:0009061,GO:0009987,GO:0015980,GO:0016020,GO:0016491,GO:0016627,GO:0016999,GO:0017144,GO:0019752,GO:0022900,GO:0032991,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0045273,GO:0045274,GO:0045281,GO:0045282,GO:0045333,GO:0048037,GO:0050660,GO:0050662,GO:0055114,GO:0070469,GO:0070470,GO:0071704,GO:0071944,GO:0072350,GO:0097159,GO:0098796,GO:0098797,GO:0098803,GO:1901265,GO:1901363,GO:1902494,GO:1990204 1.3.5.1,1.3.5.4 0.0 1170.0
CH3_k127_6413381_1 glutamate--cysteine ligase - - - 4.283e-259 803.0
CH3_k127_6413381_2 Belongs to the pirin family K06911 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000337 563.0
CH3_k127_6413381_3 Succinylglutamate desuccinylase / Aspartoacylase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009412 547.0
CH3_k127_6413381_4 succinate dehydrogenase, cytochrome b subunit K00241 - - 0.000000000000000000000000000000000000000000000000000000000000000003422 227.0
CH3_k127_6413381_5 SURF4 family K15977 - - 0.0000000000000000000000000000000000000000000000000000000000000006078 220.0
CH3_k127_6413381_6 Succinate dehydrogenase, hydrophobic K00242 - - 0.000000000000000000000000000001845 126.0
CH3_k127_6413381_7 universal stress protein - - - 0.000000000000000000000000007031 109.0
CH3_k127_6417760_0 TIGRFAM Acetolactate synthase, large subunit, biosynthetic K01652 - 2.2.1.6 0.0 1139.0
CH3_k127_6417760_1 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 0.0 1072.0
CH3_k127_6417760_10 PFAM Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 2.878e-211 658.0
CH3_k127_6417760_11 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K01501,K11206 - 3.5.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003277 556.0
CH3_k127_6417760_12 HflC and HflK could regulate a protease K04087 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002933 550.0
CH3_k127_6417760_13 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005989 502.0
CH3_k127_6417760_14 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000473 428.0
CH3_k127_6417760_15 Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage K08311 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007755 385.0
CH3_k127_6417760_16 TIGRFAM Acetolactate synthase, small subunit K01653 GO:0003674,GO:0003824,GO:0003984,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005948,GO:0006082,GO:0006520,GO:0006549,GO:0006573,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009097,GO:0009099,GO:0009987,GO:0016053,GO:0016740,GO:0016744,GO:0019752,GO:0032991,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494,GO:1990234 2.2.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002728 312.0
CH3_k127_6417760_17 Thioredoxin-like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008425 300.0
CH3_k127_6417760_18 Transglycosylase SLT domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003089 251.0
CH3_k127_6417760_19 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000001018 223.0
CH3_k127_6417760_2 Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell K00982 - 2.7.7.42,2.7.7.89 0.0 1041.0
CH3_k127_6417760_20 RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs K03666 - - 0.000000000000000000000000000000000000000009582 154.0
CH3_k127_6417760_21 - - - - 0.00000000000000000000000000000000000000003731 154.0
CH3_k127_6417760_22 Uncharacterized protein conserved in bacteria (DUF2065) K09937 - - 0.00000000000000000000000000006273 116.0
CH3_k127_6417760_3 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 0.0 1003.0
CH3_k127_6417760_4 modulator of DNA gyrase K03568 - - 7.567e-312 957.0
CH3_k127_6417760_5 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 - 6.3.4.4 1.679e-280 863.0
CH3_k127_6417760_6 HflC and HflK could encode or regulate a protease K04088 - - 5.637e-240 743.0
CH3_k127_6417760_7 Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine K02502 - - 7.498e-224 697.0
CH3_k127_6417760_8 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 3.496e-213 664.0
CH3_k127_6417760_9 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 1.53e-212 664.0
CH3_k127_6448715_0 Glycosyltransferase like family K07011 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000107 593.0
CH3_k127_6448715_1 ABC transporter transmembrane region K12536 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001405 587.0
CH3_k127_6448715_2 Pfam Glycosyl transferase family 2 K12990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001666 532.0
CH3_k127_6448715_3 Epimerase dehydratase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001271 321.0
CH3_k127_6448715_4 Haloacid dehalogenase-like hydrolase - - - 0.000004848 55.0
CH3_k127_6456417_0 Belongs to the sulfur carrier protein TusA family - - - 1.867e-236 734.0
CH3_k127_6456417_1 Acyl-CoA dehydrogenase, C-terminal domain - - - 5.098e-221 689.0
CH3_k127_6456417_2 ABC transporter, phosphonate, periplasmic substrate-binding protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008686 554.0
CH3_k127_6456417_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001148 259.0
CH3_k127_6456417_4 Bacterial protein of unknown function (DUF839) K07093 - - 0.000000000000000000000003804 102.0
CH3_k127_6481210_0 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 5.082e-285 878.0
CH3_k127_6481210_1 PEP-CTERM motif - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003462 381.0
CH3_k127_6481210_2 Na H antiporter NhaC K03315 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000868 353.0
CH3_k127_6481210_3 Isoprenylcysteine carboxyl methyltransferase (ICMT) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002672 244.0
CH3_k127_6481210_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000000001017 226.0
CH3_k127_6485589_0 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 2.371e-286 881.0
CH3_k127_6485589_1 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00833 - 2.6.1.62 6.211e-284 874.0
CH3_k127_6485589_2 Beta-Casp domain K07576 - - 2.267e-279 859.0
CH3_k127_6485589_3 Protein of unknown function (DUF3422) - - - 6.258e-257 796.0
CH3_k127_6485589_4 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001315 365.0
CH3_k127_6485589_5 Heat shock 70 kDa protein K04043 GO:0000166,GO:0000988,GO:0000989,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008144,GO:0008150,GO:0008270,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010033,GO:0010556,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0016989,GO:0017076,GO:0017111,GO:0019219,GO:0019222,GO:0022607,GO:0030554,GO:0031323,GO:0031326,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033554,GO:0034620,GO:0035639,GO:0035966,GO:0035967,GO:0036094,GO:0042221,GO:0043167,GO:0043168,GO:0043169,GO:0043531,GO:0043933,GO:0044085,GO:0044183,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0050789,GO:0050794,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0051171,GO:0051252,GO:0051716,GO:0060255,GO:0061077,GO:0065003,GO:0065007,GO:0070887,GO:0071310,GO:0071840,GO:0080090,GO:0097159,GO:0097367,GO:0140110,GO:1901265,GO:1901363,GO:1903506,GO:2001141 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000192 321.0
CH3_k127_6559233_0 PFAM NAD-dependent glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008559 458.0
CH3_k127_6559233_1 Hep Hag repeat protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003403 430.0
CH3_k127_6559233_2 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003023 299.0
CH3_k127_6559233_3 OsmC-like protein K06889,K07397 - - 0.0000000000000000000000000000001795 123.0
CH3_k127_6567757_0 CAAX protease self-immunity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001167 535.0
CH3_k127_6567757_1 Reduction of activated sulfate into sulfite K00390 - 1.8.4.10,1.8.4.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009032 482.0
CH3_k127_6567757_2 Belongs to the peptidase S33 family K01259 - 3.4.11.5 0.00000000000000000000000002674 107.0
CH3_k127_6568688_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 0.0 1167.0
CH3_k127_6568688_1 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 2.096e-298 916.0
CH3_k127_6568688_10 Rhodanese Homology Domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000101 279.0
CH3_k127_6568688_11 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 - 2.7.4.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000001915 263.0
CH3_k127_6568688_12 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995,K08744 - 2.7.8.41,2.7.8.5 0.0000000000000000000000000000000000000000000000000000000000000000000003033 239.0
CH3_k127_6568688_13 Protein of unknown function (DUF3025) - - - 0.000000000000000000000000000000000000000000006476 163.0
CH3_k127_6568688_14 4-oxalocrotonate tautomerase K01821 - 5.3.2.6 0.000000000000000000000000000000003571 128.0
CH3_k127_6568688_15 Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis K03688 - - 0.00000000004067 64.0
CH3_k127_6568688_2 synthetase, class II (G H P K01892 - 6.1.1.21 4.1e-264 815.0
CH3_k127_6568688_3 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 - 1.17.7.1,1.17.7.3 7.795e-263 810.0
CH3_k127_6568688_4 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K17713 - - 1.632e-230 717.0
CH3_k127_6568688_5 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 - 2.1.1.192 6.294e-224 695.0
CH3_k127_6568688_6 Domain of unknown function (DUF4115) K15539 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001154 605.0
CH3_k127_6568688_7 TIGRFAM Pilus biogenesis stability type IV, PilW K02656 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007375 467.0
CH3_k127_6568688_8 Uracil DNA glycosylase superfamily K21929 - 3.2.2.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004136 439.0
CH3_k127_6568688_9 Tetratricopeptide repeat-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001141 401.0
CH3_k127_6618910_0 response regulator K10943 - - 7.731e-242 751.0
CH3_k127_6618910_1 Signal transduction histidine kinase K10942 - 2.7.13.3 1.587e-233 725.0
CH3_k127_6618910_2 The M ring may be actively involved in energy transduction K02409 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001285 538.0
CH3_k127_6695328_0 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00819 - 2.6.1.13 1.31e-295 908.0
CH3_k127_6695328_1 AI-2E family transporter - - - 9.467e-214 665.0
CH3_k127_6695328_2 TIGRFAM HAD-superfamily hydrolase, subfamily IB (PSPase-like) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000231 455.0
CH3_k127_6695328_3 Belongs to the DnaA family K10763 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002419 440.0
CH3_k127_6695328_4 Papain family cysteine protease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002429 375.0
CH3_k127_6695328_5 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005634 302.0
CH3_k127_6803345_0 Belongs to the ClpA ClpB family K03694 - - 0.0 1447.0
CH3_k127_6803345_1 TIGRFAM isocitrate dehydrogenase, NADP-dependent K00031 GO:0003674,GO:0003824,GO:0003862,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006551,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009098,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.42 2.032e-254 787.0
CH3_k127_6803345_2 Protein conserved in bacteria - - - 1.943e-205 642.0
CH3_k127_6803345_3 Putative diguanylate phosphodiesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001549 568.0
CH3_k127_6803345_4 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation K06891 - - 0.00000000000000000000000000000000000000000000000000000003914 196.0
CH3_k127_6803345_5 PFAM Cold-shock protein, DNA-binding K03704 - - 0.0000000000000000000000000000000000001488 141.0
CH3_k127_6803345_6 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.000000006705 57.0
CH3_k127_6803345_7 PFAM NAD-dependent glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.00003292 49.0
CH3_k127_6803345_8 Part of the tripartite ATP-independent periplasmic (TRAP) transport system - - - 0.00003926 48.0
CH3_k127_6814625_0 Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN NodQ subfamily K00955,K00956 - 2.7.1.25,2.7.7.4 0.0 1240.0
CH3_k127_6814625_1 adenylyltransferase, small subunit K00957 - 2.7.7.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001246 604.0
CH3_k127_6814625_2 hydrolase activity, acting on ester bonds - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006733 303.0
CH3_k127_681469_0 Multicopper oxidase type - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001138 573.0
CH3_k127_681469_1 Multicopper oxidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009892 474.0
CH3_k127_681469_2 - - - - 0.000000000105 71.0
CH3_k127_681469_3 Putative transposase - - - 0.000000001806 60.0
CH3_k127_6846394_0 Catalyzes cross-linking of the peptidoglycan cell wall K05515 - 3.4.16.4 0.0 1256.0
CH3_k127_6846394_1 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 1.073e-219 684.0
CH3_k127_6846394_2 cell shape determining protein, MreB Mrl K03569 - - 1.6e-219 683.0
CH3_k127_6846394_3 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine K07566 - 2.7.7.87 1.915e-205 641.0
CH3_k127_6846394_4 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002207 567.0
CH3_k127_6846394_5 Involved in formation and maintenance of cell shape K03570 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002881 557.0
CH3_k127_6846394_6 Haloacid dehalogenase-like hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001455 505.0
CH3_k127_6846394_7 shape-determining protein MreD K03571 - - 0.0000000000000000000000000000000000000000000000000000008162 197.0
CH3_k127_6846394_8 Catalyzes the phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol K06131 - - 0.0000000000000000000000000000000000000000000000000004433 184.0
CH3_k127_6846394_9 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.000000000000000000000000000000000000000000000002565 173.0
CH3_k127_6903575_0 Signal transduction histidine kinase K07636 - 2.7.13.3 3.195e-266 821.0
CH3_k127_6903575_1 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) K03183 - 2.1.1.163,2.1.1.201 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004261 488.0
CH3_k127_6903575_2 TIGRFAM Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB K07657 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001048 460.0
CH3_k127_6903575_3 Protein of unknown function (DUF971) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002398 277.0
CH3_k127_6903575_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000000005545 230.0
CH3_k127_6903575_5 HTH-like domain K07497 - - 0.0000000000000000000000000000000000000001266 151.0
CH3_k127_6903575_6 PFAM Integrase, catalytic core K07497 - - 0.00000000000000003191 80.0
CH3_k127_6903575_7 Transposase DDE domain - - - 0.0000000000008772 67.0
CH3_k127_6963937_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.0 1658.0
CH3_k127_6963937_1 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 - 6.3.4.5 4.594e-265 816.0
CH3_k127_6963937_10 Prephenate dehydrogenase K04517 - 1.3.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005977 505.0
CH3_k127_6963937_11 FecR protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001773 329.0
CH3_k127_6963937_12 Belongs to the UPF0234 family K09767 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002998 287.0
CH3_k127_6963937_13 heme binding - - - 0.00000000000000000000000000001097 121.0
CH3_k127_6963937_2 D-isomer specific 2-hydroxyacid dehydrogenase K00058 - 1.1.1.399,1.1.1.95 3.895e-244 756.0
CH3_k127_6963937_3 PFAM aminotransferase class-III K00821 - 2.6.1.11,2.6.1.17 3.002e-240 744.0
CH3_k127_6963937_4 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 3.48e-232 720.0
CH3_k127_6963937_5 PFAM Peptidase S11, D-alanyl-D-alanine carboxypeptidase A K01286,K07258 - 3.4.16.4 1.609e-222 694.0
CH3_k127_6963937_6 NeuB family K03856 - 2.5.1.54 1.866e-216 672.0
CH3_k127_6963937_7 Prephenate dehydratase K01713,K14170 - 4.2.1.51,4.2.1.91,5.4.99.5 2.012e-210 656.0
CH3_k127_6963937_8 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 GO:0000050,GO:0003674,GO:0003824,GO:0004585,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0016743,GO:0019627,GO:0019752,GO:0034641,GO:0042450,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.3.3 3.146e-194 606.0
CH3_k127_6963937_9 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine K00831 - 2.6.1.52 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002173 530.0
CH3_k127_6968776_0 PFAM Magnesium chelatase, ChlI subunit K07391 - - 2.004e-297 917.0
CH3_k127_6968776_1 peptidase M24B, X-Pro dipeptidase aminopeptidase K01262 - 3.4.11.9 8.491e-281 866.0
CH3_k127_6968776_2 Phosphotransferase enzyme family K07102 - 2.7.1.221 2.259e-207 646.0
CH3_k127_6968776_3 Nucleotidyl transferase K00992 - 2.7.7.99 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000159 434.0
CH3_k127_6968776_4 Membrane fusogenic activity K09806 - - 0.00000000000000000000000000000000000000000000374 166.0
CH3_k127_6968776_5 - - - - 0.000000000000000002733 85.0
CH3_k127_6978092_0 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00639 - 2.3.1.29 1.683e-245 760.0
CH3_k127_6978092_1 Nad-dependent epimerase dehydratase - - - 6.536e-200 623.0
CH3_k127_6978092_2 Ferritin-like domain K03594 - 1.16.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001704 304.0
CH3_k127_6978092_3 ISXO2-like transposase domain - - - 0.0003504 43.0
CH3_k127_7039918_0 Hydrogenase formation hypA family K04654 - - 4.924e-243 751.0
CH3_k127_7039918_1 L,D-transpeptidase catalytic domain K16291 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005989 608.0
CH3_k127_7039918_2 L,D-transpeptidase catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008281 353.0
CH3_k127_7039918_3 Alanine-zipper, major outer membrane lipoprotein K06078 - - 0.00000000000000000000000000000000000000003851 154.0
CH3_k127_7039918_4 Hydrogenase assembly chaperone hypC hupF K04653 - - 0.000000000000000000000000000000003199 129.0
CH3_k127_7080699_0 Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs K08300 - 3.1.26.12 0.0 1447.0
CH3_k127_7080699_1 Responsible for synthesis of pseudouridine from uracil K06179 - 5.4.99.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001376 606.0
CH3_k127_7080699_2 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000081 561.0
CH3_k127_7080699_3 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001458 414.0
CH3_k127_7080699_4 GDSL-like Lipase/Acylhydrolase family K10804 - 3.1.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009183 333.0
CH3_k127_7180324_0 PFAM Heat shock protein DnaJ, N-terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009328 593.0
CH3_k127_7180324_1 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009371 566.0
CH3_k127_7180324_2 Uncharacterized protein conserved in bacteria (DUF2325) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009358 346.0
CH3_k127_7180324_3 Iron-storage protein K03594 - 1.16.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002559 309.0
CH3_k127_7180324_4 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 GO:0000725,GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008047,GO:0008150,GO:0008152,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0030234,GO:0031668,GO:0033554,GO:0034641,GO:0042802,GO:0043085,GO:0043170,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050790,GO:0050896,GO:0051716,GO:0065007,GO:0065009,GO:0071496,GO:0071704,GO:0090304,GO:0097159,GO:0098772,GO:1901360,GO:1901363 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009105 290.0
CH3_k127_7180324_5 transporter component K07112 - - 0.000000000000000000000000000000000000000000000000000000000009725 209.0
CH3_k127_7180324_6 - - - - 0.00000000000000000000000000000286 120.0
CH3_k127_7180324_7 Hemin uptake protein hemP - - - 0.00000000000000000000008162 99.0
CH3_k127_721856_0 decarboxylase - - - 1.606e-284 875.0
CH3_k127_721856_1 - - - - 1.069e-238 741.0
CH3_k127_721856_2 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346,K03502 GO:0000731,GO:0003674,GO:0003824,GO:0003887,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0006139,GO:0006259,GO:0006281,GO:0006301,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016604,GO:0016607,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019985,GO:0031974,GO:0031981,GO:0032991,GO:0033554,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0035770,GO:0036464,GO:0042276,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0070013,GO:0071704,GO:0071897,GO:0090304,GO:0140097,GO:1901360,GO:1901362,GO:1901576,GO:1990904 2.7.7.7 3.971e-214 668.0
CH3_k127_721856_3 D-isomer specific 2-hydroxyacid dehydrogenase K00018,K00058 - 1.1.1.29,1.1.1.399,1.1.1.95 6.174e-204 635.0
CH3_k127_721856_4 PFAM Type IV pilus assembly PilZ - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000225 493.0
CH3_k127_721856_5 PFAM Abortive infection protein K07052 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008359 439.0
CH3_k127_721856_6 it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins K02314 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004475 436.0
CH3_k127_721856_7 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length K04760 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003647 357.0
CH3_k127_721856_8 Belongs to the UPF0225 family K09858 - - 0.00000000000000000000000000000000000000000000000000000000000000000001279 234.0
CH3_k127_721856_9 Small Multidrug Resistance protein K03297 - - 0.0000000000000000000000000000000000000000000000000000001376 196.0
CH3_k127_7232313_0 Radical SAM superfamily - - - 9.581e-210 652.0
CH3_k127_7232313_1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) K07755 - 2.1.1.137 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003145 543.0
CH3_k127_7237181_0 Nucleoside H+ symporter K05820 - - 2.53e-243 752.0
CH3_k127_7237181_1 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007285 281.0
CH3_k127_7277703_0 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 3.987e-313 960.0
CH3_k127_7277703_1 intramolecular transferase activity, transferring amino groups K01845 - 5.4.3.8 3.328e-276 850.0
CH3_k127_7277703_10 Tetrapyrrole (Corrin/Porphyrin) Methylases K07056 - 2.1.1.198 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001243 454.0
CH3_k127_7277703_11 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003219 449.0
CH3_k127_7277703_12 Cytochrome c, class I - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005365 390.0
CH3_k127_7277703_13 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004264 382.0
CH3_k127_7277703_14 PFAM Sporulation domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002017 356.0
CH3_k127_7277703_15 low molecular weight K01104 GO:0000271,GO:0003674,GO:0003824,GO:0004721,GO:0004725,GO:0005975,GO:0005976,GO:0006464,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009242,GO:0009987,GO:0016051,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019538,GO:0033692,GO:0034637,GO:0034645,GO:0035335,GO:0036211,GO:0042578,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044267,GO:0046377,GO:0071704,GO:0140096,GO:1901135,GO:1901137,GO:1901564,GO:1901576 3.1.3.48 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007141 314.0
CH3_k127_7277703_16 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 - 3.6.1.66 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002197 304.0
CH3_k127_7277703_17 ApaG domain K06195 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002847 259.0
CH3_k127_7277703_18 Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione K01759 - 4.4.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000004459 258.0
CH3_k127_7277703_19 Thiamine monophosphate synthase - - - 0.000000000000000000000000000000000000000000000000000000002473 206.0
CH3_k127_7277703_2 Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily K00121 - 1.1.1.1,1.1.1.284 5.147e-239 739.0
CH3_k127_7277703_20 - - - - 0.000000000000000000000000000000000000000000000006263 173.0
CH3_k127_7277703_21 PFAM Rubredoxin-type Fe(Cys)4 protein - - - 0.00000000000000000000000000000000000001621 143.0
CH3_k127_7277703_22 L,D-transpeptidase catalytic domain - - - 0.00000000000000000000000000000000002362 134.0
CH3_k127_7277703_3 PFAM Peptidase S13, D-Ala-D-Ala carboxypeptidase C K07259 - 3.4.16.4 2.186e-218 678.0
CH3_k127_7277703_4 Methionine aminopeptidase K01265 GO:0003674,GO:0003824,GO:0004177,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008198,GO:0008233,GO:0008235,GO:0008237,GO:0008238,GO:0009987,GO:0016787,GO:0019538,GO:0036211,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0070006,GO:0070011,GO:0070084,GO:0071704,GO:0140096,GO:1901564 3.4.11.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001002 552.0
CH3_k127_7277703_5 Phosphomethylpyrimidine kinase K00941 - 2.7.1.49,2.7.4.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006564 549.0
CH3_k127_7277703_6 Serine hydrolase involved in the detoxification of formaldehyde K01070 - 3.1.2.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009877 549.0
CH3_k127_7277703_7 HAD-superfamily hydrolase, subfamily IA, variant 3 K01091 - 3.1.3.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001836 488.0
CH3_k127_7277703_8 restriction endonuclease K07448 GO:0001101,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006725,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009295,GO:0009415,GO:0009628,GO:0009987,GO:0010035,GO:0015666,GO:0016787,GO:0016788,GO:0032067,GO:0034641,GO:0042221,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043590,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051599,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901700 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001146 490.0
CH3_k127_7277703_9 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 - 2.7.7.56 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002837 476.0
CH3_k127_7283734_0 Binding-protein-dependent transport system inner membrane component K02011 - - 0.0 1010.0
CH3_k127_7283734_1 50S ribosome-binding GTPase K06946 - - 4.539e-304 935.0
CH3_k127_7283734_10 Belongs to the ompA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002974 319.0
CH3_k127_7283734_11 Belongs to the thioredoxin family K03671 - - 0.0000000000000000000000000000000000000000000000000000000000000000004964 229.0
CH3_k127_7283734_12 - - - - 0.0000000000000000000000000000000000000000000000000000003383 196.0
CH3_k127_7283734_13 - - - - 0.00000000000000000000000000000000000000000000000001353 190.0
CH3_k127_7283734_15 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease K02342 - 2.7.7.7 0.000000000000006772 74.0
CH3_k127_7283734_16 PFAM Magnesium chelatase, ChlI subunit K07391 - - 0.0000000007151 59.0
CH3_k127_7283734_2 Putative peptidoglycan binding domain K21470 - - 1.616e-297 918.0
CH3_k127_7283734_3 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 3.026e-270 833.0
CH3_k127_7283734_4 PFAM Peptidase M18 K01267 - 3.4.11.21 2.743e-258 798.0
CH3_k127_7283734_5 Domain of unknown function (DUF697) - - - 2.475e-248 768.0
CH3_k127_7283734_6 Bacterial extracellular solute-binding protein K02012 - - 3.338e-209 651.0
CH3_k127_7283734_7 Belongs to the ABC transporter superfamily K02010 - 3.6.3.30 2.693e-207 647.0
CH3_k127_7283734_8 Protein of unknown function (DUF3750) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002707 476.0
CH3_k127_7283734_9 Bacterial protein of unknown function (DUF882) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001369 376.0
CH3_k127_7308925_0 modulator of DNA gyrase K03592 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000331 410.0
CH3_k127_7308925_1 Putative neutral zinc metallopeptidase K06973 - - 0.0000000000000000000000000000000000000000000000000000000000000000001871 230.0
CH3_k127_7308925_2 Belongs to the sulfur carrier protein TusA family K04085 - - 0.000000000000000000000000000000000001449 139.0
CH3_k127_7308925_3 Histidine kinase - - - 0.0000000000000000001223 90.0
CH3_k127_7327530_0 Uncharacterized protein conserved in bacteria (DUF2309) K09822 - - 0.0 1889.0
CH3_k127_7327530_1 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001118 481.0
CH3_k127_7327530_2 Proton-conducting membrane transporter K00342 - 1.6.5.3 0.00000001915 55.0
CH3_k127_7344109_0 PFAM glycosyl transferase, family 51 K05366 - 2.4.1.129,3.4.16.4 0.0 1478.0
CH3_k127_7344109_1 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 1.506e-266 823.0
CH3_k127_7344109_10 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K01947,K03525 - 2.7.1.33,6.3.4.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004535 381.0
CH3_k127_7344109_11 One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome K02926 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004113 375.0
CH3_k127_7344109_12 Necessary for normal cell division and for the maintenance of normal septation K03978 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004246 369.0
CH3_k127_7344109_13 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008547 355.0
CH3_k127_7344109_14 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003076 331.0
CH3_k127_7344109_15 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 - - 0.000000000000000000000000000000000000000000000000000000000000000000000006608 246.0
CH3_k127_7344109_16 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 - - 0.00000000000000000000000000000000000000000000000000000000000000000000005325 241.0
CH3_k127_7344109_17 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 - - 0.0000000000000000000000000000000000000000000000000000000000000000005349 228.0
CH3_k127_7344109_18 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 - - 0.000000000000000000000000000000000000000000000000000000000000000002165 228.0
CH3_k127_7344109_19 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 - - 0.000000000000000000000000000000000000000000000000000000000000000008754 225.0
CH3_k127_7344109_2 TIGRFAM type IV pilus assembly protein PilM K02662 - - 2.645e-221 688.0
CH3_k127_7344109_20 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 - - 0.00000000000000000000000000000000000000000000000000000000000000004218 225.0
CH3_k127_7344109_21 PFAM Fimbrial assembly K02663 - - 0.00000000000000000000000000000000000000000000000000000000000001871 216.0
CH3_k127_7344109_22 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 - - 0.000000000000000000000000000000000000000000000000000000000000481 211.0
CH3_k127_7344109_23 Binds to the 23S rRNA K02876 - - 0.000000000000000000000000000000000000000000000000000000000004901 210.0
CH3_k127_7344109_24 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 - - 0.000000000000000000000000000000000000000000000000000000000904 203.0
CH3_k127_7344109_25 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 - - 0.00000000000000000000000000000000000000000000000000002071 188.0
CH3_k127_7344109_26 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit K02895 - - 0.000000000000000000000000000000000000000000000000001034 186.0
CH3_k127_7344109_27 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 - - 0.000000000000000000000000000000000000000000000004637 174.0
CH3_k127_7344109_28 Ribosomal protein L17 K02879 - - 0.000000000000000000000000000000000000000000000004981 175.0
CH3_k127_7344109_29 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 - - 0.000000000000000000000000000000000000000000318 158.0
CH3_k127_7344109_3 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 2.7.7.6 7.045e-206 642.0
CH3_k127_7344109_30 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.0000000000000000000000000000000000000000664 151.0
CH3_k127_7344109_31 Ribosomal protein L30 K02907 - - 0.0000000000000000000000003802 106.0
CH3_k127_7344109_32 Belongs to the universal ribosomal protein uL29 family K02904 - - 0.0000000000000001141 81.0
CH3_k127_7344109_33 Belongs to the bacterial ribosomal protein bL36 family K02919 - - 0.0000000000000001341 79.0
CH3_k127_7344109_4 Belongs to the ALAD family K01698 GO:0003674,GO:0003824,GO:0004655,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009987,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0043167,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.2.1.24 5.171e-195 610.0
CH3_k127_7344109_5 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003081 541.0
CH3_k127_7344109_6 Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor K03524 - 6.3.4.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002936 475.0
CH3_k127_7344109_7 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003954 466.0
CH3_k127_7344109_8 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002265 429.0
CH3_k127_7344109_9 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000122 394.0
CH3_k127_7378045_0 PFAM Peptidase M48 K06013 - 3.4.24.84 1.328e-259 801.0
CH3_k127_7378045_1 3'-to-5' exoribonuclease specific for small oligoribonucleotides K13288 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000115 379.0
CH3_k127_7378045_2 diol metabolic process K01724 - 4.2.1.96 0.0000000000000000000000000000000000000000000000000000000000000000000004858 238.0
CH3_k127_7378045_3 EF hand - - - 0.000000000000000000000000000000000008 141.0
CH3_k127_7465241_0 Multicopper oxidase type - - - 0.0 1106.0
CH3_k127_7465241_1 Multicopper oxidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003837 311.0
CH3_k127_7465241_2 PFAM transposase, IS4 family protein - - - 0.000000000000000000000000000000000000001143 154.0
CH3_k127_7465241_3 PFAM transposase, IS4 family protein - - - 0.000000000000000000000000006322 113.0
CH3_k127_7465241_4 PFAM transposase, IS4 family protein - - - 0.00000000000002747 78.0
CH3_k127_7473403_0 MlaA lipoprotein K04754 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009749 329.0
CH3_k127_7473403_1 PFAM Integrase catalytic region - - - 0.00000000000000000000000000000000000000000000000000000003262 200.0
CH3_k127_7473403_2 PFAM Integrase catalytic region - - - 0.00000000000000000000001407 106.0
CH3_k127_7473403_3 PFAM Integrase catalytic region - - - 0.0000000000009871 68.0
CH3_k127_7473403_4 ISXO2-like transposase domain - - - 0.0000002778 52.0
CH3_k127_7523708_0 Orn/Lys/Arg decarboxylase, C-terminal domain K01583 - 4.1.1.19 2.369e-300 926.0
CH3_k127_7523708_1 PFAM Peptidyl-prolyl cis-trans isomerase, cyclophilin-type K03767 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002504 311.0
CH3_k127_7544459_0 Amino acid permease - - - 1.474e-292 904.0
CH3_k127_7544459_1 Rhodanese-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005811 246.0
CH3_k127_7560052_0 Sulfatase K01130 - 3.1.6.1 1.945e-279 865.0
CH3_k127_7560052_1 Cytochrome c554 and c-prime - - - 1.014e-264 836.0
CH3_k127_7560052_2 PFAM Chemotaxis methyl-accepting receptor, signalling K03406,K03776,K05874 - - 2.946e-257 800.0
CH3_k127_7560052_3 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 1.033e-218 680.0
CH3_k127_7560052_4 Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP K00575 - 2.1.1.80 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001281 587.0
CH3_k127_7560052_5 Protein of unknown function - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006626 428.0
CH3_k127_7560052_6 Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis K03411 - 3.5.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002059 393.0
CH3_k127_7560052_7 NlpC/P60 family K13695,K19303 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005047 315.0
CH3_k127_7560052_8 Domain of unknown function (DUF4389) - - - 0.0000000000000000000000000000000000000000000000000000000179 198.0
CH3_k127_7578379_0 Belongs to the 'phage' integrase family - - - 3.499e-224 698.0
CH3_k127_7578379_1 - - - - 0.000000000000000000000000000000000000000000000000118 180.0
CH3_k127_759123_0 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00000000000000000000000000000000000000000000000000000004479 219.0
CH3_k127_759123_1 PFAM Alcohol dehydrogenase, zinc-binding K00001 - 1.1.1.1 0.000000000000000000000000000000000000000000000001878 178.0
CH3_k127_767881_0 pdz dhr glgf - - - 1.182e-264 815.0
CH3_k127_767881_1 Peptidase family M1 domain - - - 8.734e-217 674.0
CH3_k127_767881_2 Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate K01952 GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0004642,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0017076,GO:0018130,GO:0019438,GO:0019637,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0046872,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0097159,GO:0097367,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.3.5.3 0.00000000000000000000000000000000000000000000006911 168.0
CH3_k127_767881_3 glycerol-3-phosphate dehydrogenase [NAD(P)+] activity K00057 - 1.1.1.94 0.00003329 51.0
CH3_k127_7708339_0 DNA photolyase K01669 - 4.1.99.3 6.973e-201 633.0
CH3_k127_7708339_1 Domain of unknown function (DUF1731) K07071 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006096 458.0
CH3_k127_7708339_2 transposition K07497 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001212 359.0
CH3_k127_7708339_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000002582 246.0
CH3_k127_7708339_4 Pfam Adenylate and Guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000003937 239.0
CH3_k127_7708339_5 Helix-turn-helix domain - - - 0.000000000000000000000000000000000000000000000000004169 181.0
CH3_k127_7708339_6 PFAM Blue (type 1) copper domain - - - 0.00000000000000000000000000000000000000008299 155.0
CH3_k127_7708339_7 Cyclic nucleotide-monophosphate binding domain - - - 0.0000000000000000000000000000000000000001005 175.0
CH3_k127_7708339_8 - - - - 0.0004391 44.0
CH3_k127_7719739_0 Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine cysteine desulfurase (IscS) system K14058 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001731 584.0
CH3_k127_7719739_1 Protein of unknown function, DUF - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001556 355.0
CH3_k127_7719739_2 Cytochrome c, class I - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002259 310.0
CH3_k127_7719739_3 PFAM Blue (type 1) copper domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005008 294.0
CH3_k127_7719739_4 Protein of Unknown function (DUF2784) - - - 0.00000000000000000000000000000000000000000000001078 171.0
CH3_k127_7719739_5 - - - - 0.00000000000000000000000000000000000000000002287 165.0
CH3_k127_7730939_0 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 0.0 1201.0
CH3_k127_7730939_1 lipid kinase activity - - - 0.0 1170.0
CH3_k127_7730939_10 MobA-like NTP transferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005922 506.0
CH3_k127_7730939_11 two-component system sensor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000137 475.0
CH3_k127_7730939_12 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002302 399.0
CH3_k127_7730939_13 Protein of unknown function (DUF692) K09930 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001551 367.0
CH3_k127_7730939_14 Protein of unknown function (DUF2959) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001108 363.0
CH3_k127_7730939_15 YaeQ - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004445 346.0
CH3_k127_7730939_16 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009657 308.0
CH3_k127_7730939_17 Transcriptional regulatory protein, C terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000007877 250.0
CH3_k127_7730939_18 - - - - 0.00000000000000000000000000000000000000009141 154.0
CH3_k127_7730939_19 Universal stress protein family - - - 0.000000000000000000000000000000001345 134.0
CH3_k127_7730939_2 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 2.325e-310 953.0
CH3_k127_7730939_20 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.0000000000000002615 82.0
CH3_k127_7730939_3 Belongs to the CDP-alcohol phosphatidyltransferase class-I family - - - 5.314e-264 814.0
CH3_k127_7730939_4 Sulfate permease family - - - 5.141e-235 732.0
CH3_k127_7730939_5 acetyltransferase - - - 1.118e-222 694.0
CH3_k127_7730939_6 PFAM Permease YjgP YjgQ K07091 - - 4.503e-204 638.0
CH3_k127_7730939_7 PFAM Permease YjgP YjgQ K11720 - - 1.941e-203 638.0
CH3_k127_7730939_8 Belongs to the FPP GGPP synthase family K00795 - 2.5.1.1,2.5.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000452 554.0
CH3_k127_7730939_9 Converts GTP to 7,8-dihydroneopterin triphosphate K09007 - 3.5.4.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005857 528.0
CH3_k127_7749055_0 SMART Diguanylate phosphodiesterase - - - 4.665e-270 841.0
CH3_k127_7749055_1 MacB-like periplasmic core domain K02004 - - 7.084e-234 726.0
CH3_k127_7749055_2 PFAM Endonuclease exonuclease phosphatase K06896 - 3.1.3.90 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000631 580.0
CH3_k127_7749055_3 pfam abc K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004437 354.0
CH3_k127_7749055_4 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002741 244.0
CH3_k127_7749055_5 - - - - 0.0000000000000000000000001738 106.0
CH3_k127_7874690_0 tRNA-splicing ligase RtcB K14415 - 6.5.1.3 1.419e-307 944.0
CH3_k127_7874690_1 DNA polymerase X family K02347 - - 9.992e-283 872.0
CH3_k127_7874690_2 Sigma 54 modulation protein / S30EA ribosomal protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001208 367.0
CH3_k127_7874690_3 Archease protein family (MTH1598/TM1083) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001425 271.0
CH3_k127_7879522_0 Histidine kinase - - - 5.008e-284 878.0
CH3_k127_7879522_1 Putative beta-barrel porin-2, OmpL-like. bbp2 - - - 2.252e-259 803.0
CH3_k127_7879522_2 PFAM Signal transduction response regulator, receiver - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009818 421.0
CH3_k127_7879522_3 Ribonuclease E/G family K08301 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009371 391.0
CH3_k127_7879522_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000007419 237.0
CH3_k127_7886_0 Mediates influx of magnesium ions K03284 - - 7.576e-224 695.0
CH3_k127_7886_1 Protein of unknown function VcgC/VcgE (DUF2780) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002486 303.0
CH3_k127_7886_2 - - - - 0.000000000000000000000000000000000006016 136.0
CH3_k127_7886_3 Cytidylyltransferase-like - - - 0.000003356 49.0
CH3_k127_7992691_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 0.0 1737.0
CH3_k127_7992691_1 ribonuclease II K01147 - 3.1.13.1 0.0 1165.0
CH3_k127_7992691_10 Protein of unknown function (DUF721) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001356 285.0
CH3_k127_7992691_11 PFAM transposase, IS4 family protein - - - 0.00000000000000000000000000000000000000000000000000000000000007102 215.0
CH3_k127_7992691_2 TIGRFAM ATPase, P-type, K Mg Cd Cu Zn Na Ca Na H-transporter K01537 - 3.6.3.8 0.0 1039.0
CH3_k127_7992691_3 Acts as a magnesium transporter K06213 - - 1.039e-287 886.0
CH3_k127_7992691_4 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00412 - - 6.101e-266 819.0
CH3_k127_7992691_5 Peptidase family M23 K08259 - 3.4.24.75 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001098 584.0
CH3_k127_7992691_6 Sodium/calcium exchanger protein K07301 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002879 576.0
CH3_k127_7992691_7 Gram-negative bacterial TonB protein C-terminal K03832 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001265 547.0
CH3_k127_7992691_8 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 GO:0000003,GO:0003006,GO:0003674,GO:0003824,GO:0004764,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0007275,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009790,GO:0009791,GO:0009793,GO:0009987,GO:0010154,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019632,GO:0019752,GO:0022414,GO:0032501,GO:0032502,GO:0032787,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046394,GO:0046417,GO:0048316,GO:0048608,GO:0048731,GO:0048856,GO:0055114,GO:0061458,GO:0071704,GO:1901576,GO:1901615 1.1.1.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001953 475.0
CH3_k127_7992691_9 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00411 - 1.10.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004395 395.0
CH3_k127_8068199_0 Lipase (class 3) - - - 6.065e-230 713.0
CH3_k127_8068199_1 Radical SAM superfamily K04069 - 1.97.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000792 584.0
CH3_k127_8068199_2 PFAM UPF0103 Mediator of ErbB2-driven cell motility K06990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004007 492.0
CH3_k127_8068199_3 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009588 437.0
CH3_k127_8068199_4 PFAM AMMECR1 domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000002488 220.0
CH3_k127_8074799_0 Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine K00684 - 2.3.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005272 449.0
CH3_k127_8074799_1 May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate K21420 - 2.3.2.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003697 380.0
CH3_k127_8202333_0 UvrD REP K03657 - 3.6.4.12 0.0 1391.0
CH3_k127_8202333_1 Alpha amylase, catalytic domain K01176 - 3.2.1.1 0.0 1313.0
CH3_k127_8202333_10 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004883 318.0
CH3_k127_8202333_11 Glycine-zipper domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006807 292.0
CH3_k127_8202333_12 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005933 263.0
CH3_k127_8202333_13 Protein of unknown function (DUF2782) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003256 248.0
CH3_k127_8202333_14 - - - - 0.000000000000000000000000000000000000000000000000000000000000007019 218.0
CH3_k127_8202333_15 - - - - 0.000000000000000000000000000000000000000000000000000000000629 203.0
CH3_k127_8202333_16 ABC-2 family transporter protein - - - 0.0000007159 52.0
CH3_k127_8202333_2 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.0 1266.0
CH3_k127_8202333_3 amine dehydrogenase activity - - - 6.327e-250 792.0
CH3_k127_8202333_4 cysteine protease - - - 1.773e-196 615.0
CH3_k127_8202333_5 Belongs to the pseudomonas-type ThrB family K02204 - 2.7.1.39 6.796e-194 606.0
CH3_k127_8202333_6 Uncharacterized conserved protein (DUF2278) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006341 597.0
CH3_k127_8202333_7 PFAM Phosphoribulokinase uridine kinase K00855 - 2.7.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003365 571.0
CH3_k127_8202333_8 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005547 520.0
CH3_k127_8202333_9 Cytokinin riboside 5'-monophosphate phosphoribohydrolase K06966 - 3.2.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002493 484.0
CH3_k127_8217533_0 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 1.361e-253 786.0
CH3_k127_8217533_1 A domain family that is part of the cupin metalloenzyme superfamily. K18850 - 1.14.11.47 4.194e-221 688.0
CH3_k127_8217533_10 Pfam Transposase - - - 0.000000000001138 70.0
CH3_k127_8217533_11 Pfam Transposase - - - 0.000000000009157 67.0
CH3_k127_8217533_12 DDE superfamily endonuclease - - - 0.00000000009533 64.0
CH3_k127_8217533_2 Peptidase family S49 K04773 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001092 556.0
CH3_k127_8217533_3 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002421 391.0
CH3_k127_8217533_4 TIGRFAM Methionine sulphoxide reductase B K07305 - 1.8.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009335 333.0
CH3_k127_8217533_5 PFAM transposase, IS4 family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006068 285.0
CH3_k127_8217533_6 - - - - 0.00000000000000000000000001519 109.0
CH3_k127_8217533_7 - - - - 0.0000000000000000000000111 100.0
CH3_k127_8217533_9 - - - - 0.0000000000007462 70.0
CH3_k127_8249505_0 SNARE associated Golgi protein - - - 0.0 1347.0
CH3_k127_8249505_1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) K07755 - 2.1.1.137 1.098e-235 728.0
CH3_k127_8249505_2 Radical SAM superfamily - - - 4.751e-206 641.0
CH3_k127_8249505_3 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg K00174 - 1.2.7.11,1.2.7.3 4.466e-194 614.0
CH3_k127_8249505_4 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase K00261 - 1.4.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005016 530.0
CH3_k127_8249505_5 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K00170 - 1.2.7.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005882 494.0
CH3_k127_8249505_6 Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003663 466.0
CH3_k127_8249505_7 AMP-binding enzyme C-terminal domain K00666 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001032 445.0
CH3_k127_8249505_8 2-oxoacid acceptor oxidoreductase, gamma subunit, pyruvate 2-ketoisovalerate K00172 - 1.2.7.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003174 397.0
CH3_k127_8254806_0 PFAM TonB-dependent receptor, beta-barrel - - - 0.0 1275.0
CH3_k127_8254806_1 PFAM MotA TolQ ExbB proton channel K03561 - - 9.319e-221 694.0
CH3_k127_8254806_2 TPR repeat - - - 3.379e-215 672.0
CH3_k127_8254806_3 Protein of unknown function (DUF3450) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002111 417.0
CH3_k127_8254806_4 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003939 367.0
CH3_k127_8254806_5 PFAM MotA TolQ ExbB proton channel K03561 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007192 334.0
CH3_k127_8254806_6 PFAM Biopolymer transport protein ExbD TolR K03559 - - 0.0000000000000000000000000000000000000000000000000000000000000000001731 231.0
CH3_k127_8254806_7 DDE superfamily endonuclease - - - 0.00000000000000000000000000000000000000000000000000008666 187.0
CH3_k127_8254806_8 Phosphate-starvation-inducible E - - - 0.00000003341 56.0
CH3_k127_8263993_0 Transglycosylase SLT domain K08305 - - 4.375e-255 789.0
CH3_k127_8263993_1 Bacterial protein of unknown function (DUF839) K07093 - - 1.224e-251 780.0
CH3_k127_8263993_10 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K06186 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000009151 254.0
CH3_k127_8263993_11 Belongs to the Fur family K03711 - - 0.0000000000000000000000000000000000000000000000000000002963 196.0
CH3_k127_8263993_12 Phosphate acyltransferases K00655 - 2.3.1.51 0.0000000000000000000000000000000000000000000000000001601 195.0
CH3_k127_8263993_14 Universal stress protein family - - - 0.00000000000000000000000000000000003556 139.0
CH3_k127_8263993_15 Transposase K07481 - - 0.00000000000000017 80.0
CH3_k127_8263993_16 PFAM Transposase, IS4-like K07481 - - 0.00000000009717 64.0
CH3_k127_8263993_2 Signal transduction histidine kinase, subgroup 1, dimerisation phosphoacceptor - - - 4.085e-247 766.0
CH3_k127_8263993_3 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 2.541e-208 649.0
CH3_k127_8263993_4 Sulfate permease family - - - 2.891e-208 657.0
CH3_k127_8263993_5 Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP K01525 - 3.6.1.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001205 525.0
CH3_k127_8263993_6 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008839,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016627,GO:0016628,GO:0019752,GO:0019877,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576 1.17.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005882 508.0
CH3_k127_8263993_7 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002321 316.0
CH3_k127_8263993_8 Transcriptional regulatory protein, C terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003549 267.0
CH3_k127_8263993_9 - K19168 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004301 256.0
CH3_k127_8264980_0 Response regulator receiver K02487,K03407,K06596 - 2.7.13.3 0.0 2375.0
CH3_k127_8264980_1 ABC transporter K06147 - - 0.0 1440.0
CH3_k127_8264980_10 Protein of unknown function (DUF3619) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005361 277.0
CH3_k127_8264980_11 Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase K09862 - - 0.000000000000000000000000000000004609 129.0
CH3_k127_8264980_2 PFAM chemotaxis K02660 - - 0.0 1197.0
CH3_k127_8264980_3 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 GO:0006082,GO:0006520,GO:0006566,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009987,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0071704,GO:1901564,GO:1901605 4.3.1.19 0.0 999.0
CH3_k127_8264980_4 Protein of unknown function, DUF484 K02488 - 2.7.7.65 2.23e-234 726.0
CH3_k127_8264980_5 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 - 2.3.1.1,2.3.1.35 3.822e-209 654.0
CH3_k127_8264980_6 Belongs to the Nudix hydrolase family K03574 - 3.6.1.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002741 581.0
CH3_k127_8264980_7 Protein of unknown function (DUF815) K06923 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004789 562.0
CH3_k127_8264980_8 PFAM RNA polymerase sigma factor 70, region 4 type 2 K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004915 362.0
CH3_k127_8264980_9 Domain of unknown function (DUF1854) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007093 291.0
CH3_k127_8303711_0 SMART ATPase, AAA type, core K09691 - - 5.483e-249 771.0
CH3_k127_8303711_1 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000236 301.0
CH3_k127_8303711_2 Transport permease protein K09688,K09690 - - 0.00000001231 59.0
CH3_k127_8616507_0 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 0.0 1573.0
CH3_k127_8616507_1 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.0 1298.0
CH3_k127_8616507_2 Participates in both transcription termination and antitermination K02600 - - 4.661e-299 919.0
CH3_k127_8616507_3 Required for maturation of 30S ribosomal subunits K09748 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004832 303.0
CH3_k127_8616507_4 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002121 251.0
CH3_k127_8616507_5 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 - 5.4.99.25 0.000000000000000000000000000000000001669 138.0
CH3_k127_8618152_0 Tetratricopeptide repeat - - - 0.0 1080.0
CH3_k127_8618152_1 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 - 2.7.1.148 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006321 535.0
CH3_k127_8618152_2 Belongs to the ParA family K03609 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008368 522.0
CH3_k127_8618152_3 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001591 510.0
CH3_k127_8618152_4 Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization K03610 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009448 464.0
CH3_k127_8618152_5 Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein K02494 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007732 413.0
CH3_k127_8618152_6 Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell K03608 - - 0.00000000000000000000000000000000000000000000001214 172.0
CH3_k127_8618152_7 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.00000000008953 62.0
CH3_k127_8622303_0 DHH family K07462 - - 0.0 1137.0
CH3_k127_8622303_1 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.0 1007.0
CH3_k127_8622303_2 Transporter associated domain K06189 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000164 542.0
CH3_k127_8622303_3 TRAP transporter T-component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004649 506.0
CH3_k127_8622303_4 PFAM MgtC SapB transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004674 511.0
CH3_k127_8622303_5 Phosphoglycerate mutase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001434 405.0
CH3_k127_8622303_6 PIN domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001324 257.0
CH3_k127_8622303_7 Antitoxin Phd_YefM, type II toxin-antitoxin system - - - 0.000132 48.0
CH3_k127_8626358_0 Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA K12297 - 2.1.1.173,2.1.1.264 0.0 1418.0
CH3_k127_8626358_1 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions K01507 - 3.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009526 367.0
CH3_k127_8626358_2 Zeta toxin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007409 282.0
CH3_k127_8626358_3 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K15726 - - 0.0000000000000000000000000000000000000000000000000000171 188.0
CH3_k127_8626358_4 ParD-like antitoxin of type II bacterial toxin-antitoxin system - - - 0.000000000000000000000000000000000000000002082 159.0
CH3_k127_8626358_5 RNA-binding K14761 - - 0.0000000000000000000000000000000000007623 139.0
CH3_k127_8644232_0 Domain of unknown function DUF21 - - - 6.435e-258 797.0
CH3_k127_8644232_1 Resolvase - - - 0.0001919 44.0
CH3_k127_8664548_0 Belongs to the Orn Lys Arg decarboxylase class-II family K01581 - 4.1.1.17 3.53e-257 793.0
CH3_k127_8664548_1 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis K00560 - 2.1.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007732 526.0
CH3_k127_8664548_2 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis K00287 - 1.5.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001161 317.0
CH3_k127_8664548_3 PFAM Peptidase M17, leucyl aminopeptidase K01255 - 3.4.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003398 316.0
CH3_k127_8664548_4 TIGRFAM TIGR03790 family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001796 289.0
CH3_k127_8701929_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 0.0 1332.0
CH3_k127_8701929_1 PFAM aminotransferase, class I K00812 - 2.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001017 348.0
CH3_k127_8701929_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000606 223.0
CH3_k127_8801101_0 Belongs to the 'phage' integrase family - - - 1.902e-236 735.0
CH3_k127_8801101_1 Plasmid recombination enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001221 417.0
CH3_k127_8801101_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000001182 235.0
CH3_k127_8801101_3 Helix-turn-helix domain - - - 0.0000000000000000000000000000000000000000000704 164.0
CH3_k127_8801101_4 Transcriptional regulator - - - 0.00000000000000000000000000000000000000001027 153.0
CH3_k127_8801101_5 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 GO:0002097,GO:0002099,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016853,GO:0018130,GO:0019438,GO:0034404,GO:0034470,GO:0034641,GO:0034654,GO:0034660,GO:0042455,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0051075,GO:0055086,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.99.17 0.000000000000000000000000000003384 120.0
CH3_k127_8801101_6 - - - - 0.0000000000000000000000000004945 124.0
CH3_k127_8801101_8 - - - - 0.00000002288 64.0
CH3_k127_9067183_0 Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate K00381,K00392 - 1.8.1.2,1.8.7.1 0.0 1162.0
CH3_k127_9067183_1 Bacterial regulatory helix-turn-helix protein, lysR family K13634 - - 2.869e-202 631.0
CH3_k127_9067183_2 adenylyltransferase, small subunit K00957 - 2.7.7.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000514 586.0
CH3_k127_9067183_3 Reduction of activated sulfate into sulfite K00390 - 1.8.4.10,1.8.4.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004285 494.0
CH3_k127_9067183_4 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001331 346.0
CH3_k127_9067183_5 Bacterial protein of unknown function (DUF934) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001492 273.0
CH3_k127_9067183_6 Protein of unknown function (DUF3293) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000009511 249.0
CH3_k127_9067183_7 - - - - 0.000000000000000000000000000000000000000000004228 163.0
CH3_k127_9067183_9 Tim44 - - - 0.0000000000002228 70.0
CH3_k127_9086697_0 Bacterial transferase hexapeptide (six repeats) K00640 - 2.3.1.30 2.256e-196 613.0
CH3_k127_9086697_1 Pyridoxal-phosphate dependent enzyme K01738 - 2.5.1.47 1.993e-195 611.0
CH3_k127_9086697_10 Antitoxin component of a toxin-antitoxin (TA) module - - - 0.00000000000000000000000000000000000004254 143.0
CH3_k127_9086697_11 Antitoxin component of a toxin-antitoxin (TA) module - - - 0.00000000000000000000000000000000002972 136.0
CH3_k127_9086697_13 - - - - 0.0000000000000000000000002681 105.0
CH3_k127_9086697_15 nucleotide-binding Protein - - - 0.000000000001937 69.0
CH3_k127_9086697_16 TIR domain - - - 0.000006107 49.0
CH3_k127_9086697_2 Tim44 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000175 525.0
CH3_k127_9086697_3 Belongs to the MtfA family K09933 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001738 518.0
CH3_k127_9086697_4 HAD-hyrolase-like - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001289 428.0
CH3_k127_9086697_5 alpha-ribazole phosphatase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003174 319.0
CH3_k127_9086697_6 Predicted small integral membrane protein (DUF2165) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001932 310.0
CH3_k127_9086697_7 Haem-degrading - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007538 261.0
CH3_k127_9086697_8 PFAM Nucleotidyltransferase - - - 0.000000000000000000000000000000000000003399 149.0
CH3_k127_9086697_9 YoeB-like toxin of bacterial type II toxin-antitoxin system - - - 0.000000000000000000000000000000000000003644 147.0
CH3_k127_9094994_0 TIGRFAM Ubiquinone biosynthesis hydroxylase, UbiH UbiF VisC COQ6 K03185 - - 0.00000000000000000000000000000000000000000000000000294 183.0
CH3_k127_9094994_1 PEP-CTERM motif - - - 0.0000000000000000000000000000000000000321 150.0
CH3_k127_9094994_2 PFAM Integrase, catalytic core K07497 - - 0.00003723 46.0
CH3_k127_9135885_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 GO:0000166,GO:0003674,GO:0003824,GO:0004748,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005971,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009262,GO:0009263,GO:0009987,GO:0016491,GO:0016725,GO:0016728,GO:0018130,GO:0019438,GO:0019637,GO:0032991,GO:0034641,GO:0034654,GO:0036094,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046483,GO:0055086,GO:0055114,GO:0061731,GO:0071704,GO:0090407,GO:0097159,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902494,GO:1990204 1.17.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000089 490.0
CH3_k127_9135885_1 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006089 310.0
CH3_k127_9135885_2 PFAM Invasion gene expression up-regulator, SirB - - - 0.00000000000000000000000000000000000000000000000000000000000000009527 224.0
CH3_k127_9135885_3 - - - - 0.0000000000000000000000000000000000000000001566 159.0
CH3_k127_9135885_4 Tetratricopeptide repeat - - - 0.000000000000000000000002727 110.0
CH3_k127_9135885_5 Tetratricopeptide repeat - - - 0.0000000000000000000004869 104.0
CH3_k127_9135885_6 PFAM Transposase, IS4-like - - - 0.00000000000000000006047 90.0
CH3_k127_9140020_0 Putative diguanylate phosphodiesterase - - - 1.831e-211 663.0
CH3_k127_9140020_1 Bacterial transcriptional repressor C-terminal K16137 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003524 395.0
CH3_k127_9140020_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007999 351.0
CH3_k127_9140020_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003367 278.0
CH3_k127_9159942_0 ABC transporter K06147,K18893 - - 0.0 1167.0
CH3_k127_9159942_1 TraB family - - - 8.816e-243 752.0
CH3_k127_9159942_2 Putative DNA-binding domain K09929 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006406 476.0
CH3_k127_9159942_3 Belongs to the UPF0276 family K09930 - - 0.0000000000000000000000000000000000000000000000000002196 187.0
CH3_k127_9159942_4 DDE superfamily endonuclease - - - 0.00000000009533 64.0
CH3_k127_9200228_0 transposition K07497 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001486 436.0
CH3_k127_9200228_1 Transposase - - - 0.000000000000000000000000000000000000000000000009283 172.0
CH3_k127_9200228_2 - - - - 0.00000000000000000000000000000000000000001341 153.0
CH3_k127_9200228_3 - - - - 0.0000000000000000003167 89.0
CH3_k127_92053_0 PFAM cell divisionFtsK SpoIIIE K03466 - - 0.0 1448.0
CH3_k127_92053_1 AAA C-terminal domain K07478 - - 9.497e-271 839.0
CH3_k127_92053_2 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 5.074e-232 721.0
CH3_k127_92053_3 diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003294 497.0
CH3_k127_92053_4 MotA TolQ ExbB proton channel K03561 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001111 460.0
CH3_k127_92053_5 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009087 413.0
CH3_k127_92053_6 Biopolymer transport protein ExbD TolR K03559 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003385 259.0
CH3_k127_92053_7 RDD family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002377 256.0
CH3_k127_92053_8 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) K03634 - - 0.00000000000000000000000006011 115.0
CH3_k127_9231620_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 - - 0.0 1192.0
CH3_k127_9231620_1 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 1.252e-232 720.0
CH3_k127_9231620_2 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 GO:0002097,GO:0002099,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016853,GO:0018130,GO:0019438,GO:0034404,GO:0034470,GO:0034641,GO:0034654,GO:0034660,GO:0042455,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0051075,GO:0055086,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.99.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002422 604.0
CH3_k127_9231620_3 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002447 555.0
CH3_k127_9231620_4 SNARE associated Golgi protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002779 364.0
CH3_k127_9231620_5 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006597 363.0
CH3_k127_9231620_6 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004258 361.0
CH3_k127_9231620_7 Preprotein translocase subunit K03210 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003542 252.0
CH3_k127_924101_0 Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine K12960 - 3.5.4.28,3.5.4.31 8.27e-282 867.0
CH3_k127_924101_1 O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway K00568 - 2.1.1.222,2.1.1.64 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000253 480.0
CH3_k127_924101_2 Belongs to the ompA family K03286 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001145 335.0
CH3_k127_924101_3 HAD-superfamily hydrolase, subfamily IA, variant 1 K22292 - 3.1.3.105 0.0000000000000000000000000000003988 122.0
CH3_k127_924101_4 ABC transporter K01990 - - 0.00000000000000000000000001182 109.0
CH3_k127_9258927_0 helicase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008491 274.0
CH3_k127_9258927_1 transcription initiation from RNA polymerase II promoter - - - 0.00000000000000000000000000000002917 133.0
CH3_k127_9258927_2 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000007697 114.0
CH3_k127_9258927_3 - - - - 0.00001275 47.0
CH3_k127_9264293_0 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001118 389.0
CH3_k127_9264293_1 Tfp pilus assembly protein FimV - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005695 306.0
CH3_k127_9264293_2 Domain of unknown function (DUF4124) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001646 256.0
CH3_k127_927293_0 Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744 - - 0.0 1369.0
CH3_k127_927293_1 pyruvate-flavodoxin oxidoreductase activity - - - 0.0 1163.0
CH3_k127_927293_10 Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) K00097 - 1.1.1.262 3.161e-203 634.0
CH3_k127_927293_11 ABC transporter K09013 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000297 503.0
CH3_k127_927293_12 Domain of unknown function (DUF4126) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003775 436.0
CH3_k127_927293_13 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003417 371.0
CH3_k127_927293_14 Scaffold protein Nfu/NifU N terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008852 369.0
CH3_k127_927293_15 Transcriptional regulator K13643 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009928 310.0
CH3_k127_927293_16 NifU-like N terminal domain K04488 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001113 308.0
CH3_k127_927293_17 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.0000000000000000000000000000000000000000000000000000000000000000000000000001581 264.0
CH3_k127_927293_18 Belongs to the HesB IscA family K13628 - - 0.000000000000000000000000000000000000000000000000000000000000004412 217.0
CH3_k127_927293_19 Universal stress protein - - - 0.000000000000000000000000000000000000000000000000000000106 195.0
CH3_k127_927293_2 Uncharacterized protein family (UPF0051) K09014 - - 1.309e-311 955.0
CH3_k127_927293_20 Belongs to the peptidase S24 family K03503 - - 0.0000000000000000000000000000000000000003393 158.0
CH3_k127_927293_21 PFAM Uncharacterised protein family UPF0150 - - - 0.00000000000000000000000000000000004707 135.0
CH3_k127_927293_22 Putative diguanylate phosphodiesterase - - - 0.000000000000000000000000000000002659 130.0
CH3_k127_927293_23 - - - - 0.0000000000000000000000000000305 121.0
CH3_k127_927293_24 HicA toxin of bacterial toxin-antitoxin, - - - 0.00000000000000008308 82.0
CH3_k127_927293_3 Aldehyde dehydrogenase K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 7.135e-284 874.0
CH3_k127_927293_4 - - - - 9.118e-272 838.0
CH3_k127_927293_5 PFAM DNA-repair protein, UmuC-like K03502 - - 1.859e-267 824.0
CH3_k127_927293_6 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 1.584e-259 801.0
CH3_k127_927293_7 Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation K03771 - 5.2.1.8 2.031e-251 781.0
CH3_k127_927293_8 Uncharacterized protein family (UPF0051) K09015 - - 7.556e-249 771.0
CH3_k127_927293_9 Uncharacterized protein conserved in bacteria (DUF2331) - - - 1.097e-223 695.0
CH3_k127_9362639_0 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 - 4.1.99.17 0.0 1260.0
CH3_k127_9362639_1 Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control K00970 - 2.7.7.19 9.498e-291 894.0
CH3_k127_9362639_10 PFAM Copper resistance protein CopC K07156 - - 0.00000000000000000000000000000000000000000000000000000000000000000001075 235.0
CH3_k127_9362639_2 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 - - 9.466e-285 876.0
CH3_k127_9362639_3 TIGRFAM type I secretion outer membrane protein, TolC K12340 - - 6.67e-206 648.0
CH3_k127_9362639_4 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002792 535.0
CH3_k127_9362639_5 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 - 6.3.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005113 500.0
CH3_k127_9362639_6 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002408 477.0
CH3_k127_9362639_7 Ribosomal RNA adenine dimethylase K00573 - 2.1.1.77 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001813 411.0
CH3_k127_9362639_8 PFAM Copper resistance D K07245 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002401 394.0
CH3_k127_9362639_9 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) K00950 - 2.7.6.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004424 329.0
CH3_k127_939545_0 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 4.076e-202 630.0
CH3_k127_939545_1 Diguanylate cyclase phosphodiesterase with PAS PAC - - - 0.0000000000000000000575 90.0
CH3_k127_9424773_0 Pyridine nucleotide-disulphide oxidoreductase K17218 - 1.8.5.4 9.878e-294 906.0
CH3_k127_9424773_1 membrane transporter protein K07090 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009385 387.0
CH3_k127_9424773_2 transcriptional regulator, ArsR - - - 0.00000000000000000000000000000000000000004526 151.0
CH3_k127_9448905_0 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate K00931 - 2.7.2.11 6.905e-224 695.0
CH3_k127_9448905_1 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 2.889e-218 678.0
CH3_k127_9448905_2 Belongs to the FPP GGPP synthase family K02523 - 2.5.1.90 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002337 593.0
CH3_k127_9448905_3 Protein of unknown function (DUF1624) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008112 490.0
CH3_k127_9448905_4 This protein binds to 23S rRNA in the presence of protein L20 K02888 - - 0.00000000000000000000000000000000000000000000000000000002813 199.0
CH3_k127_9448905_5 Belongs to the bacterial ribosomal protein bL27 family K02899 - - 0.00000000000000000000000000000000000000000000003987 169.0
CH3_k127_9448905_6 - - - - 0.0000000000001466 70.0
CH3_k127_9448905_7 Protein of unknown function (DUF1624) - - - 0.0000001494 57.0
CH3_k127_9458394_0 TIGRFAM ATPase, P-type, K Mg Cd Cu Zn Na Ca Na H-transporter K01539 - 3.6.3.9 0.0 1354.0
CH3_k127_9458394_1 Heat shock 70 kDa protein K04043 - - 0.0 1032.0
CH3_k127_9458394_2 Saccharopine dehydrogenase C-terminal domain K00808 - 2.5.1.44 1.976e-285 879.0
CH3_k127_9458394_3 Belongs to the peptidase S16 family - - - 9.848e-255 796.0
CH3_k127_9458394_4 FAD dependent oxidoreductase K09471 - - 2.768e-247 767.0
CH3_k127_9458394_5 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001491 380.0
CH3_k127_9458394_6 Domain in cystathionine beta-synthase and other proteins. - - - 0.000000000000000000000000000000000000000000000000000000000000000149 224.0
CH3_k127_9458394_7 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.0000000000000000000000000000000000000000000000000000000000000181 216.0
CH3_k127_9458394_8 PFAM Integrase, catalytic core K07497 - - 0.00000000002808 64.0
CH3_k127_9458394_9 PFAM Integrase, catalytic core K07497 - - 0.0003851 45.0
CH3_k127_951006_0 Diguanylate cyclase phosphodiesterase with PAS PAC - - - 0.0 1645.0
CH3_k127_951006_1 L-serine dehydratase single chain form K01752 - 4.3.1.17 9.198e-292 897.0
CH3_k127_951006_2 Protein of unknown function (DUF3422) - - - 1.363e-274 847.0
CH3_k127_951006_3 PFAM thioesterase superfamily K19222 - 3.1.2.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000495 320.0
CH3_k127_951006_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003255 269.0
CH3_k127_951333_0 Cytochrome C1 family K00413 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003362 455.0
CH3_k127_951333_1 Glutathione S-transferase, N-terminal domain K03599 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000998 397.0
CH3_k127_951333_2 stringent starvation protein B K03600 - - 0.00000000000000000000000000000000000000000000000000000000000000000002354 234.0
CH3_k127_951333_3 - - - - 0.000003396 49.0
CH3_k127_9527061_0 Required for chromosome condensation and partitioning K03529 - - 2.041e-316 977.0
CH3_k127_9527061_1 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family - - - 1.475e-237 745.0
CH3_k127_9527061_10 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002017 252.0
CH3_k127_9527061_11 Iron-binding zinc finger CDGSH type - - - 0.0000000000000000000000000000000000000000000000001058 177.0
CH3_k127_9527061_12 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.000000000000000000000000000000000000000000000002162 174.0
CH3_k127_9527061_13 - - - - 0.0000000000000000000000000000007207 121.0
CH3_k127_9527061_14 ParD-like antitoxin of type II bacterial toxin-antitoxin system - - - 0.0000000000000000000004966 96.0
CH3_k127_9527061_15 ParE-like toxin of type II bacterial toxin-antitoxin system - - - 0.00000000000003656 73.0
CH3_k127_9527061_16 ParE-like toxin of type II bacterial toxin-antitoxin system - - - 0.0000000000512 65.0
CH3_k127_9527061_17 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 0.000005307 51.0
CH3_k127_9527061_2 Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins - - - 9.868e-237 734.0
CH3_k127_9527061_3 Putative MetA-pathway of phenol degradation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004039 488.0
CH3_k127_9527061_4 membrane transporter protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002909 480.0
CH3_k127_9527061_5 COG0526, thiol-disulfide isomerase and thioredoxins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002684 420.0
CH3_k127_9527061_6 phosphatase activity K01560,K07025,K20866,K21063 GO:0003674,GO:0003824,GO:0006766,GO:0006767,GO:0006771,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042578,GO:0042726,GO:0042727,GO:0043726,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 3.1.3.10,3.1.3.104,3.8.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001699 382.0
CH3_k127_9527061_7 acetyltransferases and hydrolases with the alpha beta hydrolase fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005537 360.0
CH3_k127_9527061_8 universal stress protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002699 352.0
CH3_k127_9527061_9 EVE domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001162 282.0
CH3_k127_9532813_0 Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis K03688 - - 0.0 994.0
CH3_k127_9532813_1 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 4.628e-301 927.0
CH3_k127_9532813_2 Sulfatase K01130 - 3.1.6.1 8.585e-198 622.0
CH3_k127_9532813_3 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003521 558.0
CH3_k127_9532813_4 protein conserved in bacteria K03690 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004836 358.0
CH3_k127_9532813_5 Subunit R is required for both nuclease and ATPase activities, but not for modification K01153 - 3.1.21.3 0.000006558 49.0
CH3_k127_9532813_6 Subunit R is required for both nuclease and ATPase activities, but not for modification K01153 - 3.1.21.3 0.00001655 49.0
CH3_k127_9577014_0 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 3.732e-263 816.0
CH3_k127_9577014_1 Protein of unknown function (DUF423) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000004188 241.0
CH3_k127_9577014_2 - - - - 0.0000000000000000000002508 97.0
CH3_k127_9582845_0 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 0.0 1481.0
CH3_k127_9582845_1 Belongs to the glycosyl hydrolase 57 family K22451 - 2.4.1.25 0.0 1333.0
CH3_k127_9582845_2 Belongs to the glycosyl hydrolase 57 family - - - 0.0 1097.0
CH3_k127_9582845_3 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 9.118e-272 838.0
CH3_k127_9587227_0 Ribosomal RNA adenine dimethylase - - - 1.545e-205 640.0
CH3_k127_9587227_1 PIN domain - - - 0.000000000000000000000000000000000000000000000000000000000000000006542 225.0
CH3_k127_9608811_0 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001084 349.0
CH3_k127_9608811_1 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.0000000000000000000000000000000000000000000000000000002808 205.0
CH3_k127_9667250_0 Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids K19221 - 2.5.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000106 394.0
CH3_k127_9667250_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003444 365.0
CH3_k127_9667250_2 Proton-conducting membrane transporter K00342 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000004262 253.0
CH3_k127_9667250_3 Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6- dimethylbenzimidazole (DMB) K00768 - 2.4.2.21 0.00000000000000000000000000000000000000000000000000000000001401 210.0
CH3_k127_9667250_4 Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate K02231 - 2.7.1.156,2.7.7.62 0.00000000000000000000000000000000000000000000000000000000009315 205.0
CH3_k127_9667250_5 Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation K02232 - 6.3.5.10 0.00000000000000000000000000000001884 129.0
CH3_k127_9667250_6 Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate K02231 - 2.7.1.156,2.7.7.62 0.00000000000000000000001711 100.0
CH3_k127_9667250_7 Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation K02232 - 6.3.5.10 0.0000000000000000000004288 96.0
CH3_k127_9667250_8 TIGRFAM TonB-dependent vitamin B12 receptor K16092 - - 0.000000000001078 67.0
CH3_k127_9678745_0 Formate acetyltransferase K00656 - 2.3.1.54 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001816 306.0
CH3_k127_9678745_1 4Fe-4S single cluster domain K04069 - 1.97.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004337 277.0
CH3_k127_9678745_2 - - - - 0.00000000000000000000000000000000000000000000000000000003858 198.0
CH3_k127_9726906_0 cyanophycin synthetase K03802 - 6.3.2.29,6.3.2.30 0.0 1648.0
CH3_k127_9726906_1 cyanophycin synthetase K03802 - 6.3.2.29,6.3.2.30 0.0 1432.0
CH3_k127_9726906_2 HsdM N-terminal domain K03427 - 2.1.1.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000705 331.0
CH3_k127_9726906_3 - - - - 0.000000000000000000000000000000000000000000000000000001495 196.0
CH3_k127_9726906_5 Domain of unknown function DUF21 - - - 0.0000004232 51.0
CH3_k127_977409_0 repeat protein - - - 1.267e-274 848.0
CH3_k127_977409_1 PFAM Rieske 2Fe-2S K00499 - 1.14.15.7 3.024e-254 783.0
CH3_k127_977409_2 EamA-like transporter family K15270 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000373 324.0
CH3_k127_977409_3 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004901 269.0
CH3_k127_9789177_0 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 5.865e-199 620.0
CH3_k127_9789177_1 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008812 362.0
CH3_k127_9789177_2 Redoxin K03564 - 1.11.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006658 341.0
CH3_k127_9789177_3 PFAM Smr protein MutS2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001294 329.0
CH3_k127_9789177_4 Prokaryotic dksA/traR C4-type zinc finger - - - 0.000000000000000000000000000000000000000000000000000000000000000000003659 235.0
CH3_k127_9789177_5 Dioxygenase K00449 - 1.13.11.3 0.0000000000000000000000000000000000000000000000000000000000000000002822 230.0
CH3_k127_9834605_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.0 1158.0
CH3_k127_9834605_1 Asparaginase K01424,K13051 - 3.4.19.5,3.5.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001401 427.0
CH3_k127_9834605_2 PFAM Transposase, IS4-like - - - 0.000000000000000000000000000000000000000000000007649 171.0
CH3_k127_9866058_0 Required for the activity of the bacterial periplasmic transport system of putrescine K02055,K11069 - - 6.842e-228 707.0
CH3_k127_9866058_1 Binding-protein-dependent transport system inner membrane component K02054,K11071 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006824 556.0
CH3_k127_9866058_2 Binding-protein-dependent transport system inner membrane component K11070 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001846 480.0
CH3_k127_9866058_3 hydrolase of the alpha beta superfamily K07018 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000386 313.0
CH3_k127_9866058_4 Ferredoxin - - - 0.000000000000000000000000000000000000000000000000000000000000001308 218.0
CH3_k127_9866058_5 PFAM Transposase, IS4-like K07481 - - 0.000000000000000000000009275 103.0
CH3_k127_9866058_6 Domain of unknown function (DUF4372) - - - 0.0000000002002 62.0