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Overview

ID MAG00284
Name CH3_bin.57
Sample SMP0009
Taxonomy
Kingdom Bacteria
Phylum Pseudomonadota
Class Gammaproteobacteria
Order Burkholderiales
Family JBBRTU01
Genus JBBRTU01
Species
Assembly information
Completeness (%) 63.9
Contamination (%) 1.94
GC content (%) 55.0
N50 (bp) 6,188
Genome size (bp) 1,830,182

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes1990

Gene name Description KEGG GOs EC E-value Score Sequence
CH3_k127_10015284_0 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003918 572.0
CH3_k127_10015284_1 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929,K15792 - 6.3.2.10,6.3.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001256 475.0
CH3_k127_10028777_0 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001092 406.0
CH3_k127_10028777_1 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005458 347.0
CH3_k127_10028777_2 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005369 284.0
CH3_k127_10028777_3 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 0.0000000000000000000000000000000000000000000000000193 179.0
CH3_k127_10049648_0 Sigma-54 interaction domain - - - 1.115e-235 734.0
CH3_k127_10049648_1 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008906 531.0
CH3_k127_10055146_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001957 458.0
CH3_k127_10055146_1 Glycine cleavage system K03567 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0018130,GO:0019438,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:1901360,GO:1901362,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004042 307.0
CH3_k127_10055146_2 Calcineurin-like phosphoesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001025 280.0
CH3_k127_10055146_3 - - - - 0.000000000000000000000000000000000000000000000001389 176.0
CH3_k127_10055146_4 Transcriptional regulator, Crp Fnr family - - - 0.0000000000000000000000000000000000000000001753 164.0
CH3_k127_10055146_5 Cold shock protein K03704 - - 0.00000000000000000000000000000000009107 133.0
CH3_k127_10055146_6 Uncharacterised protein family (UPF0149) K07039 - - 0.0000000000000000000000003367 112.0
CH3_k127_10055146_7 endonuclease containing a URI domain K07461 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004527,GO:0004529,GO:0004536,GO:0006139,GO:0006259,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008296,GO:0008408,GO:0009987,GO:0016787,GO:0016788,GO:0016796,GO:0016895,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360 - 0.000000000000000000000000822 109.0
CH3_k127_10055146_8 Translation initiation factor K03113 - - 0.000000000000000000002454 93.0
CH3_k127_10055146_9 - - - - 0.0000000000003194 74.0
CH3_k127_1005530_0 TIGRFAM Diguanylate cyclase K13069,K21085 - 2.7.7.65 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004344 294.0
CH3_k127_1005530_1 - - - - 0.00000000000000000000000000000000000000009687 170.0
CH3_k127_1005530_2 Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor K00254 - 1.3.5.2 0.00000000000000000002786 91.0
CH3_k127_10100597_0 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 - 2.5.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000532 434.0
CH3_k127_10100597_1 Histidine kinase K08082 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001028 351.0
CH3_k127_10100597_2 response regulator K08083 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003098 336.0
CH3_k127_10100597_3 Thioredoxin-like domain - - - 0.00000000000000000000000000000000000000005638 157.0
CH3_k127_10100597_4 synthase K01719 - 4.2.1.75 0.0000000000000000000000000001197 119.0
CH3_k127_10140857_0 Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell K00982 - 2.7.7.42,2.7.7.89 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001415 490.0
CH3_k127_10140857_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005344 414.0
CH3_k127_10140857_2 molybdenum cofactor K03831 - 2.7.7.75 0.0000000000000000000000000000000000000000000000000000000000000000000002892 239.0
CH3_k127_10140857_3 - - - - 0.00000000000000000000000000000000000000000000000000000008477 216.0
CH3_k127_10140857_4 Sulfatase-modifying factor enzyme 1 - - - 0.0000000000000000000000000000000000000000002821 168.0
CH3_k127_10140857_5 Domain in cystathionine beta-synthase and other proteins. - - - 0.000000000000000000000000000000000000004846 151.0
CH3_k127_10184015_0 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 5.48e-234 727.0
CH3_k127_10184015_1 Ion transport protein - - - 0.00000000000000000000000000000000000002424 148.0
CH3_k127_10184015_2 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.00000000000000000000000000000001802 127.0
CH3_k127_10221444_0 GAF domain K20962 - 3.1.4.52 0.0 1100.0
CH3_k127_10221444_1 Part of the tripartite ATP-independent periplasmic (TRAP) transport system - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004377 523.0
CH3_k127_10221444_2 COG4664 TRAP-type mannitol chloroaromatic compound transport system, large permease component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002999 466.0
CH3_k127_10221444_3 Belongs to the DEAD box helicase family - GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008026,GO:0008104,GO:0008150,GO:0008186,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032991,GO:0033036,GO:0035770,GO:0036464,GO:0042623,GO:0043186,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044424,GO:0044444,GO:0044464,GO:0045495,GO:0051179,GO:0060293,GO:0070035,GO:0140098,GO:1990904 - 0.0000000005059 63.0
CH3_k127_10237221_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K01139 - 2.7.6.5,3.1.7.2 0.0 1097.0
CH3_k127_10237221_1 Protein kinase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002585 464.0
CH3_k127_10237221_10 Involved in the biosynthesis of porphyrin-containing compound - - - 0.000000000000000000006889 93.0
CH3_k127_10237221_11 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 0.0000000002893 66.0
CH3_k127_10237221_2 protein phosphatase 2C domain protein K20074 - 3.1.3.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001462 423.0
CH3_k127_10237221_3 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 - 2.7.7.56 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000956 409.0
CH3_k127_10237221_4 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 - 3.6.1.66 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003734 370.0
CH3_k127_10237221_5 domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004579 351.0
CH3_k127_10237221_6 Essential for recycling GMP and indirectly, cGMP K00942 - 2.7.4.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001371 276.0
CH3_k127_10237221_7 endoribonuclease L-PSP - - - 0.000000000000000000000000000000000000000000000000000000004755 200.0
CH3_k127_10237221_8 Nicotinamidase K08281 - 3.5.1.19 0.00000000000000000000000000000000000000000003524 171.0
CH3_k127_10237221_9 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 - 2.7.7.6 0.00000000000000000000000000002381 117.0
CH3_k127_10253323_0 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008443 556.0
CH3_k127_10253323_1 Belongs to the bacterial ribosomal protein bL32 family K02911 - - 0.00000000000000000000000000001951 117.0
CH3_k127_10253323_2 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 GO:0003674,GO:0003824,GO:0004312,GO:0004315,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0032787,GO:0033818,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:0072330,GO:1901576 2.3.1.180 0.00000000000000001528 82.0
CH3_k127_10253323_3 Uncharacterized ACR, COG1399 K07040 - - 0.0000000000007203 71.0
CH3_k127_10264927_0 Cytochrome c bacterial - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000802 358.0
CH3_k127_10264927_1 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 - 2.5.1.129 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001996 302.0
CH3_k127_10264927_2 ATP-dependent protease La (LON) substrate-binding domain - - - 0.000000000000000000000000000000000000000000000000000007027 197.0
CH3_k127_10264927_3 TonB-dependent Receptor Plug K02014 - - 0.000000000000000000000000000007538 124.0
CH3_k127_10283425_0 Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001548 470.0
CH3_k127_10283425_1 Fumarase C C-terminus K01744 - 4.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002914 332.0
CH3_k127_10283425_2 Barrel-sandwich domain of CusB or HlyD membrane-fusion - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000378 251.0
CH3_k127_10283425_3 Thioredoxin-like K07152 - - 0.0000000000000000000000000000000000000000000000000000000000000009957 222.0
CH3_k127_10283425_4 Thioredoxin-like - - - 0.0000000000000000000000000000000000000000000000000000000001799 208.0
CH3_k127_10283425_5 ubiE/COQ5 methyltransferase family - - - 0.0000000000000000000000000000001617 131.0
CH3_k127_10305758_0 Integrase core domain - - - 1.475e-205 642.0
CH3_k127_10305758_1 pfam abc K09691 - - 1.737e-199 630.0
CH3_k127_10305758_2 PFAM Glycosyl transferase, group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003332 507.0
CH3_k127_10305758_3 ABC-2 type transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003337 432.0
CH3_k127_10305758_4 Methyltransferase FkbM domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005197 329.0
CH3_k127_10305758_5 PPIC-type PPIASE domain K03769 - 5.2.1.8 0.0000000000000000000000000000001361 135.0
CH3_k127_10305758_6 Glycosyl transferases group 1 - - - 0.000001183 52.0
CH3_k127_10305758_7 ABC-type sugar transport system periplasmic component - - - 0.0005093 50.0
CH3_k127_1036902_0 PFAM Transposase IS66 family K07484 - - 7.248e-239 749.0
CH3_k127_1036902_1 PFAM IS66 Orf2 like protein - - - 0.00000000000000000000000000000000000000000000000000002642 190.0
CH3_k127_1036902_2 reverse transcriptase - - - 0.000000000000001004 76.0
CH3_k127_1036902_3 transposase activity - - - 0.00001083 51.0
CH3_k127_1043214_0 Diguanylate cyclase K13590 - 2.7.7.65 9.018e-215 682.0
CH3_k127_1043214_1 Flagellar basal body rod FlgEFG protein C-terminal K02396 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007545 514.0
CH3_k127_1043214_10 Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation K02393 - - 0.00000000000000000000000000000000000000000000000000000000000000000001259 239.0
CH3_k127_1043214_11 Belongs to the flagella basal body rod proteins family K02388 - - 0.0000000000000000000000000000000000000000000000000000000005037 203.0
CH3_k127_1043214_12 Required for flagellar hook formation. May act as a scaffolding protein K02389 - - 0.000000000000000000000000000000000000000000000000000000002044 207.0
CH3_k127_1043214_13 Type ii and iii secretion system protein - - - 0.0000000000000000000000000000000000000000000000000005728 192.0
CH3_k127_1043214_14 Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body K02387 - - 0.000000000000000000000000000000000000000002447 160.0
CH3_k127_1043214_2 Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation K02394 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001569 498.0
CH3_k127_1043214_3 Flagellar basal body rod FlgEFG protein C-terminal K02390 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008796 473.0
CH3_k127_1043214_4 flagellar basal-body rod protein K02392 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004693 413.0
CH3_k127_1043214_5 Bacterial flagellin N-terminal helical region K02397 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000404 357.0
CH3_k127_1043214_6 Belongs to the flagella basal body rod proteins family K02391 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009706 310.0
CH3_k127_1043214_7 Taurine catabolism dioxygenase TauD, TfdA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000688 295.0
CH3_k127_1043214_8 Flagellar rod assembly protein muramidase FlgJ K02395 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001011 286.0
CH3_k127_1043214_9 Predicted membrane protein (DUF2238) K08984 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002422 266.0
CH3_k127_10463419_0 Universal stress protein K06149 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000227 243.0
CH3_k127_10463419_1 response regulator - - - 0.00000000000000000000000000000000000000000000000005719 181.0
CH3_k127_10463419_2 histidine kinase - - - 0.000000000000000000000000000000000000000004253 157.0
CH3_k127_10486060_0 PFAM RNA-binding protein AU-1 Ribonuclease E G K08301 - - 2.97e-239 747.0
CH3_k127_10486060_1 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000992 565.0
CH3_k127_10486060_2 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate K00147 GO:0003674,GO:0003824,GO:0004350,GO:0006082,GO:0006520,GO:0006560,GO:0006561,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016491,GO:0016620,GO:0016903,GO:0018130,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.2.1.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002331 402.0
CH3_k127_10486060_3 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008608 271.0
CH3_k127_10486060_4 Maf-like protein K06287 - - 0.000000000000000000000000000000000000000000000000000000000000000000006403 239.0
CH3_k127_10486060_5 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 - 2.1.1.177 0.00000000000000000000000000000000000000000000000000000000000003186 217.0
CH3_k127_10486060_7 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.00000000000000000000000000000000000000000006163 164.0
CH3_k127_10486060_8 - - - - 0.0000000000000000000000000000000000000000004051 158.0
CH3_k127_10486060_9 Tfp pilus assembly protein FimV - - - 0.000000000000000000000000000000008424 142.0
CH3_k127_10486718_0 Reutilizes the intact tripeptide L-alanyl-gamma-D- glutamyl-meso-diaminopimelate by linking it to UDP-N- acetylmuramate K02558 - 6.3.2.45 1.357e-199 625.0
CH3_k127_10486718_1 SMART AAA ATPase K02450 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000584 265.0
CH3_k127_10507251_0 FAD linked oxidase domain protein - - - 2.27e-255 791.0
CH3_k127_10507251_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006895 421.0
CH3_k127_10507251_2 Histidine triad (Hit) protein - - - 0.0000000000000000000000000000000000000000000000000000001705 196.0
CH3_k127_10507251_3 Signal transduction histidine kinase K07636 - 2.7.13.3 0.00000000000000000000000000000000000000000000000001107 182.0
CH3_k127_10521905_0 Secretin and TonB N terminus short domain K02453 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008183 489.0
CH3_k127_10521905_1 - - - - 0.000000000000000000000000000000000000007351 151.0
CH3_k127_10521905_2 Pilus assembly protein, PilO - - - 0.00000000000000000000000000000000165 137.0
CH3_k127_10521905_3 - - - - 0.000000000000000000000000000000002417 135.0
CH3_k127_10595682_0 Signal transduction histidine kinase, subgroup 1, dimerisation phosphoacceptor region - - - 1.905e-222 736.0
CH3_k127_10595682_1 PEP-CTERM motif - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002985 514.0
CH3_k127_10595682_2 Formate nitrite K02598,K06212 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009699 413.0
CH3_k127_10595682_3 response regulator receiver - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001925 322.0
CH3_k127_10595682_4 Histidine kinase-like ATPases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002337 319.0
CH3_k127_10595682_5 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region K00335,K18331 - 1.12.1.3,1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003459 312.0
CH3_k127_10595682_6 Response regulator receiver - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002374 282.0
CH3_k127_10595682_7 TIGRFAM formate dehydrogenase, alpha subunit K05299 - 1.17.1.10 0.000000000000000000000000000000000000000000000000000000000000000000006383 247.0
CH3_k127_10595682_8 PFAM Respiratory-chain NADH dehydrogenase 24 Kd subunit K00334 - 1.6.5.3 0.000000000000003467 81.0
CH3_k127_10647159_0 Belongs to the glycosyl hydrolase 57 family K22451 - 2.4.1.25 4.913e-295 918.0
CH3_k127_10647159_1 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 2.229e-253 790.0
CH3_k127_10647159_2 Belongs to the glycosyl hydrolase 57 family - - - 8.947e-236 745.0
CH3_k127_10647159_3 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 5.861e-225 702.0
CH3_k127_10647159_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000000003897 231.0
CH3_k127_10647159_5 Peptidyl-prolyl cis-trans K03775 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000002141 208.0
CH3_k127_10647159_6 Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor K00254 - 1.3.5.2 0.0000000000000000000000000009232 113.0
CH3_k127_10647929_0 GTP-binding protein TypA K06207 - - 0.0 1096.0
CH3_k127_10647929_1 phosphoenolpyruvate carboxykinase (diphosphate) activity K20370 - 4.1.1.38 6.669e-225 701.0
CH3_k127_10647929_2 protein conserved in bacteria K09760 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004231 566.0
CH3_k127_10647929_3 Belongs to the DEAD box helicase family K11927 GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008026,GO:0008104,GO:0008150,GO:0008186,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032991,GO:0033036,GO:0035770,GO:0036464,GO:0042623,GO:0043186,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044424,GO:0044444,GO:0044464,GO:0045495,GO:0051179,GO:0060293,GO:0070035,GO:0140098,GO:1990904 3.6.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001148 527.0
CH3_k127_10647929_4 Belongs to the methyltransferase superfamily K06969 - 2.1.1.191 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001849 484.0
CH3_k127_10647929_5 Thioredoxin - - - 0.00000000000000000000000000000000000000000000002251 172.0
CH3_k127_10647929_6 RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs K03666 - - 0.000000000000000000000000003539 113.0
CH3_k127_10647929_7 Integrase core domain K07482 GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003824,GO:0004803,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006310,GO:0006313,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0030983,GO:0032135,GO:0032196,GO:0032991,GO:0032993,GO:0034641,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0140097,GO:1901360,GO:1901363 - 0.0002298 44.0
CH3_k127_10663_0 Peptidoglycan-binding domain 1 protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001071 263.0
CH3_k127_10663_1 Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000008907 261.0
CH3_k127_10663_2 Domain of unknown function (DUF4389) - - - 0.00000000000000000000000000000005502 125.0
CH3_k127_10703591_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 2.225e-311 961.0
CH3_k127_10703591_1 PFAM Protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000002255 258.0
CH3_k127_10758754_0 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002102 350.0
CH3_k127_10758754_1 Imidazoleglycerol-phosphate dehydratase K01693 - 4.2.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003817 343.0
CH3_k127_10758754_2 CobB/CobQ-like glutamine amidotransferase domain K02501 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002051 334.0
CH3_k127_10758754_3 TIGRFAM phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 - 5.3.1.16 0.000000000000000000000000000000000000995 138.0
CH3_k127_10812255_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003569 556.0
CH3_k127_10812255_1 Thioredoxin K03672 - 1.8.1.8 0.000000000000000000000000000000000000000000000000000000000002647 212.0
CH3_k127_10812255_2 One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA K03071 - - 0.000000000000000000000000000000000000000000000002272 175.0
CH3_k127_10812255_3 Rhodanese Homology Domain - - - 0.000000000000000000000000000000000000000000003443 167.0
CH3_k127_10812255_4 Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins K03676 - - 0.0000000000000000000000000000000003042 133.0
CH3_k127_10815301_0 Threonyl and Alanyl tRNA synthetase second additional domain K01868 - 6.1.1.3 0.0 1106.0
CH3_k127_10815301_1 kinase activity - - - 9.207e-204 643.0
CH3_k127_10815301_2 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002577 282.0
CH3_k127_10815301_3 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 - 6.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000004222 228.0
CH3_k127_10815301_4 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 - - 0.000000000000000000000000000000000000000000000000000000355 194.0
CH3_k127_10815301_5 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase - - - 0.0000000000000000000000000000000000000000000000005539 175.0
CH3_k127_10815301_6 Belongs to the bacterial ribosomal protein bL35 family K02916 - - 0.00000000000000000000000115 105.0
CH3_k127_10916195_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001621 486.0
CH3_k127_10916195_1 Histidine kinase K07675,K20263 GO:0000155,GO:0000160,GO:0003674,GO:0003824,GO:0004672,GO:0004673,GO:0004721,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006468,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0016301,GO:0016310,GO:0016311,GO:0016740,GO:0016772,GO:0016773,GO:0016775,GO:0016787,GO:0016788,GO:0016791,GO:0018106,GO:0018193,GO:0018202,GO:0019538,GO:0023014,GO:0023052,GO:0035556,GO:0036211,GO:0042578,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0046777,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007,GO:0071704,GO:0071944,GO:0140096,GO:1901564 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000381 487.0
CH3_k127_10916195_2 response regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002315 270.0
CH3_k127_10916195_3 Diguanylate cyclase with PAS PAC and GAF sensors - - - 0.00000000000000000000000000000000000001186 161.0
CH3_k127_10927443_0 transglycosylase K08309 - - 2.007e-229 727.0
CH3_k127_10927443_1 Aldehyde dehydrogenase family K00135,K08324 - 1.2.1.16,1.2.1.20,1.2.1.24,1.2.1.79 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007694 535.0
CH3_k127_10927443_2 NmrA-like family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007615 322.0
CH3_k127_10979778_0 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02195 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000167 379.0
CH3_k127_10979778_1 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02194 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005732 274.0
CH3_k127_10979778_2 once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system K02193 - 3.6.3.41 0.00000000000000000000000000000000000000000000000000000000000000005931 228.0
CH3_k127_10979778_3 Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH K02197 - - 0.0000000000000000000000000000000000000000000000000000000001529 207.0
CH3_k127_10979778_4 - - - - 0.00000000000000001311 83.0
CH3_k127_10979778_5 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02196 - - 0.00000000125 60.0
CH3_k127_10987022_0 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K07277 - - 0.0 1149.0
CH3_k127_10987022_1 zinc metalloprotease K11749 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003172 530.0
CH3_k127_10987022_10 tRNA (guanine-N7-)-methyltransferase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002559 263.0
CH3_k127_10987022_11 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.00000000000000000000000000000000000000000000000000000000000000000000000002049 255.0
CH3_k127_10987022_12 Belongs to the skp family K06142 - - 0.000000000000000000000000000000000000000000000000000000000000001125 223.0
CH3_k127_10987022_13 Pentapeptide repeats (8 copies) - - - 0.000000000000000000000000000000000000001901 158.0
CH3_k127_10987022_14 SpoU rRNA Methylase family K03437 - - 0.0000000000000003413 81.0
CH3_k127_10987022_2 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 - 2.4.1.182 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004021 525.0
CH3_k127_10987022_3 Metal-dependent hydrolase HDOD - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004668 512.0
CH3_k127_10987022_4 MotA/TolQ/ExbB proton channel family K02556 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002072 461.0
CH3_k127_10987022_5 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003791 438.0
CH3_k127_10987022_6 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001814 413.0
CH3_k127_10987022_7 PFAM OmpA MotB domain protein K02557 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001332 406.0
CH3_k127_10987022_8 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000214 379.0
CH3_k127_10987022_9 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 - 4.2.1.59 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009139 278.0
CH3_k127_11012138_0 TIGRFAM Oxaloacetate decarboxylase, alpha subunit K01960 - 6.4.1.1 5e-324 1000.0
CH3_k127_11012138_1 acetyl-CoA carboxylase, biotin carboxylase K01959 - 6.4.1.1 6.512e-275 850.0
CH3_k127_11012138_2 Uncharacterized ACR, COG1399 K07040 - - 0.00000000000000000000000000000000001189 141.0
CH3_k127_1103404_0 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides K00525 GO:0000166,GO:0003674,GO:0003824,GO:0004748,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005971,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009262,GO:0009263,GO:0009987,GO:0016491,GO:0016725,GO:0016728,GO:0018130,GO:0019438,GO:0019637,GO:0032991,GO:0034641,GO:0034654,GO:0036094,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046483,GO:0055086,GO:0055114,GO:0061731,GO:0071704,GO:0090407,GO:0097159,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902494,GO:1990204 1.17.4.1 0.0 1496.0
CH3_k127_1103404_1 Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4) K01433 - 3.5.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004134 484.0
CH3_k127_1103404_2 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides K00526 - 1.17.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001429 458.0
CH3_k127_1103404_3 Histidine kinase K20974 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004359 418.0
CH3_k127_1103404_4 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003864 287.0
CH3_k127_11050132_0 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 - 6.1.1.1 5.727e-203 637.0
CH3_k127_11050132_1 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001745 602.0
CH3_k127_11050132_10 - - - - 0.0000000000000000000000002209 105.0
CH3_k127_11050132_12 - - - - 0.0000006511 57.0
CH3_k127_11050132_2 peptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003194 574.0
CH3_k127_11050132_3 Belongs to the citrate synthase family K01647 - 2.3.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004112 521.0
CH3_k127_11050132_4 Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling K09001 - 2.7.1.170 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002197 484.0
CH3_k127_11050132_5 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000764 262.0
CH3_k127_11050132_6 Required for insertion of 4Fe-4S clusters K15724 - - 0.00000000000000000000000000000000000000000000000000000000000004886 214.0
CH3_k127_11050132_7 Ribosomal protein S9/S16 K02996 - - 0.0000000000000000000000000000000000000000000000000000000002247 205.0
CH3_k127_11050132_8 - - - - 0.00000000000000000000000000000000000000000000000000000004452 205.0
CH3_k127_11050132_9 Integral membrane protein CcmA involved in cell shape determination - - - 0.00000000000000000000000000000000000000000000000002775 181.0
CH3_k127_11065281_0 Helicase K03722 - 3.6.4.12 1.251e-256 801.0
CH3_k127_11065281_1 PFAM OmpA MotB domain protein K02557 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001187 279.0
CH3_k127_11065281_2 Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P-ring assembly K02386 - - 0.0000000000000000000000000000000000000000000000000001017 194.0
CH3_k127_11065281_3 PFAM FlgN family protein K02399 - - 0.000000000000000000000000000000000001069 144.0
CH3_k127_11065281_4 negative regulator of flagellin synthesis K02398 - - 0.00000000062 64.0
CH3_k127_1107963_0 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 6.083e-224 709.0
CH3_k127_1107963_1 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002458 475.0
CH3_k127_1107963_2 Transcriptional regulator K04761 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001515 278.0
CH3_k127_1107963_3 Domain of unknown function (DUF4202) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001488 249.0
CH3_k127_1107963_4 YqeY-like protein K09117 - - 0.00000000000000000000000000000000000000000000000000000000005895 207.0
CH3_k127_1107963_5 Belongs to the bacterial ribosomal protein bS21 family K02970 - - 0.0000000000000000000000000000000183 126.0
CH3_k127_1111212_0 Involved in arsenical resistance. Thought to form the channel of an arsenite pump K03893 - - 8.254e-209 653.0
CH3_k127_1111212_1 response to heat K07090 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005188 411.0
CH3_k127_1111212_2 Sigma factor PP2C-like phosphatases K20977 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001019 290.0
CH3_k127_1111212_3 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 - - 0.00000000000000000000000000000000000000000000000000000000000765 209.0
CH3_k127_11195159_0 Belongs to the peptidase S16 family - - - 0.0 1041.0
CH3_k127_11195159_1 RNA polymerase sigma factor K03087 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002842 411.0
CH3_k127_11195159_2 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003875 394.0
CH3_k127_11195159_3 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002543 330.0
CH3_k127_11195159_4 peptidase K06194 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006123 295.0
CH3_k127_11195159_5 P-aminobenzoate N-oxygenase AurF - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000023 274.0
CH3_k127_11195159_6 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 - 6.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000005616 256.0
CH3_k127_11195159_7 PFAM regulatory protein MerR - - - 0.000000000000000000000000000000000000000000000000000003971 192.0
CH3_k127_11195159_8 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K04764 - - 0.00000000000000000000000000000000000000000000001022 172.0
CH3_k127_11195159_9 - - - - 0.0002323 46.0
CH3_k127_11202043_0 Fic/DOC family - - - 0.00000000000000000000000000000000000000000000000000004982 187.0
CH3_k127_11202043_1 Plasmid maintenance system killer K07334 - - 0.00000000000000000000000000000000000000000000000000007706 186.0
CH3_k127_11202043_2 TIGRFAM Addiction module antidote protein, HigA K21498 - - 0.000000000000000000000000000000000000000000000003026 174.0
CH3_k127_11202043_3 Nad-dependent epimerase dehydratase - - - 0.00000000000000000000001876 101.0
CH3_k127_11232490_0 PFAM type II secretion system K02455,K02653 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004545 519.0
CH3_k127_11232490_1 Type II secretion system (T2SS), protein E, N-terminal domain K02454 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003405 413.0
CH3_k127_11232490_2 Type II secretion system (T2SS), protein G K02456 - - 0.000000000000000000000000000000000000000000000000000000000000000001089 229.0
CH3_k127_11283712_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 0.0 1056.0
CH3_k127_11283712_1 Putative diguanylate phosphodiesterase - - - 8.962e-217 703.0
CH3_k127_11283712_2 Catalyzes the formation of L-homocysteine from O- succinyl-L-homoserine (OSHS) and hydrogen sulfide K10764 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002666 376.0
CH3_k127_11283712_3 Diguanylate cyclase K13069 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0007155,GO:0008150,GO:0008270,GO:0009987,GO:0010639,GO:0016740,GO:0016772,GO:0016779,GO:0022610,GO:0031344,GO:0031345,GO:0031589,GO:0032879,GO:0033043,GO:0042710,GO:0042802,GO:0043167,GO:0043169,GO:0043708,GO:0043709,GO:0043900,GO:0043902,GO:0044010,GO:0044087,GO:0044464,GO:0044764,GO:0046872,GO:0046914,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051129,GO:0051270,GO:0051271,GO:0051704,GO:0052621,GO:0060187,GO:0060491,GO:0065007,GO:0090605,GO:0090609,GO:1900190,GO:1900192,GO:1900231,GO:1900233,GO:1902115,GO:1902116,GO:1902208,GO:1902209 2.7.7.65 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000519 379.0
CH3_k127_11283712_4 PFAM CheC domain protein K03410 - - 0.00000000000000000000000000000000000000000000000000000005279 204.0
CH3_k127_11283712_6 Pfam Response regulator receiver - - - 0.00000000000000000000000000000000000000000000007343 171.0
CH3_k127_11283712_7 Heavy metal-associated domain protein K07213 - - 0.000000000000000000005639 94.0
CH3_k127_11325614_0 Beta-lactamase K01286 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000009185 271.0
CH3_k127_11325614_1 COG0508 Pyruvate 2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes - - - 0.00000000000000000000000000000003576 136.0
CH3_k127_11336985_0 FAD binding domain K09828 - 1.3.1.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005103 610.0
CH3_k127_11336985_1 COG0480 Translation elongation factors (GTPases) K02355 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009528 554.0
CH3_k127_113444_0 General secretory system II protein E domain protein K02454,K02652 - - 5.461e-282 877.0
CH3_k127_113444_1 Secretin and TonB N terminus short domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002706 576.0
CH3_k127_113444_2 PFAM type II secretion system K02653 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007147 454.0
CH3_k127_113444_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004272 298.0
CH3_k127_113444_4 Tetratricopeptide repeats - - - 0.000000000000000000000000000000000000000000000000001554 200.0
CH3_k127_113444_5 PFAM Sporulation domain protein - - - 0.00000000000000000000000000000000000003932 152.0
CH3_k127_113444_6 addiction module antidote protein, HigA family K21498 - - 0.0000000000000000000000000000000000006785 141.0
CH3_k127_113444_7 - - - - 0.0000000000000000000000002369 114.0
CH3_k127_113444_9 RelE-like toxin of type II toxin-antitoxin system HigB K07334 - - 0.000000004265 57.0
CH3_k127_11348258_0 Abc transporter K06147 - - 4.304e-217 677.0
CH3_k127_11348258_1 Peptidase family M28 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002669 347.0
CH3_k127_11348258_2 Glutathione S-transferase, C-terminal domain K00799 - 2.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003633 290.0
CH3_k127_11348258_3 Putative quorum-sensing-regulated virulence factor K09954 - - 0.000000000000000000000000000000000008808 136.0
CH3_k127_11370381_0 Domains REC, sigma54 interaction, HTH8 K20919 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005016 441.0
CH3_k127_11378507_0 PFAM aminotransferase class V K00830 - 2.6.1.44,2.6.1.45,2.6.1.51 2.838e-230 714.0
CH3_k127_11378507_1 glycolate oxidase iron-sulfur subunit K11473 - - 1.001e-219 686.0
CH3_k127_11378507_2 PFAM FAD linked oxidase domain protein K00104,K11472 - 1.1.3.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001021 544.0
CH3_k127_11378507_3 PFAM FAD linked oxidase domain protein K00102,K00104,K03777 - 1.1.2.4,1.1.3.15,1.1.5.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002162 384.0
CH3_k127_11380510_0 CHASE2 K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002485 537.0
CH3_k127_11380510_1 Protein of unknown function (DUF560) - - - 0.000000000000000000000000000000000000000000000000000000000000006506 234.0
CH3_k127_11380510_2 PFAM FecR protein - - - 0.00000000000000000000000000000492 136.0
CH3_k127_11380510_3 CHASE2 K01768 - 4.6.1.1 0.000000000000000008043 84.0
CH3_k127_11391570_0 Protein of unknown function - - - 0.0 1325.0
CH3_k127_11391570_1 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.0 1111.0
CH3_k127_11391570_10 Iron-binding zinc finger CDGSH type - - - 0.0000000000000000000000000000000007597 131.0
CH3_k127_11391570_11 Ribbon-helix-helix domain - - - 0.0000000000000000000000000000001326 125.0
CH3_k127_11391570_12 Type II transport protein GspH K08084 - - 0.00000000000000000000000000001596 123.0
CH3_k127_11391570_13 Mannose-6-phosphate isomerase - - - 0.000000000000000000003088 94.0
CH3_k127_11391570_14 Protein of unknown function (DUF2934) - - - 0.000000003954 62.0
CH3_k127_11391570_2 peptidase U62, modulator of DNA gyrase K03568 - - 2.139e-261 811.0
CH3_k127_11391570_3 DAHP synthetase I family K03856 - 2.5.1.54 2.863e-213 665.0
CH3_k127_11391570_4 AAA domain K07028 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003615 525.0
CH3_k127_11391570_5 Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K01501,K11206 - 3.5.5.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004482 494.0
CH3_k127_11391570_6 D-Amino acid dehydrogenase K00285,K03153 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0006082,GO:0006520,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0016491,GO:0016638,GO:0016641,GO:0017144,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0036094,GO:0042364,GO:0042723,GO:0042724,GO:0043167,GO:0043168,GO:0043436,GO:0043799,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0055114,GO:0071704,GO:0071949,GO:0072527,GO:0072528,GO:0097159,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 1.4.3.19,1.4.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001294 431.0
CH3_k127_11391570_7 Belongs to the Fur family K09826 - - 0.000000000000000000000000000000000000000000000000000000000000000000007722 236.0
CH3_k127_11391570_8 nucleic acid-binding protein contains PIN domain K07063 - - 0.0000000000000000000000000000000000000000000000000000000000000000003753 230.0
CH3_k127_11391570_9 Type IV minor pilin ComP, DNA uptake sequence receptor K02655 - - 0.0000000000000000000000000000000000000000000000000238 184.0
CH3_k127_11432298_0 Antidote-toxin recognition MazE, bacterial antitoxin - - - 0.000000000001135 75.0
CH3_k127_11432298_1 FecCD transport family - - - 0.000000000009369 70.0
CH3_k127_11432298_2 Toxic component of a toxin-antitoxin (TA) module. An RNase K18828 - - 0.000000003186 63.0
CH3_k127_11432298_4 ABC transporter - - - 0.00001929 51.0
CH3_k127_11432298_5 EF-hand, calcium binding motif - - - 0.0001471 53.0
CH3_k127_11499638_0 ISXO2-like transposase domain K07488 - - 0.000000000000000000000000000000000000000000000000000000008789 201.0
CH3_k127_11499638_1 Saccharopine dehydrogenase C-terminal domain K00808 - 2.5.1.44 0.000000000000000000000000000000000000000001154 156.0
CH3_k127_11499638_2 ISXO2-like transposase domain K07488 - - 0.0000000000000000000000000000000000001081 143.0
CH3_k127_11499638_4 Spermine/spermidine synthase domain K00797 - 2.5.1.16 0.0000000000000000008713 87.0
CH3_k127_11499638_5 NB-ARC domain protein - - - 0.00000000000001519 83.0
CH3_k127_11499638_6 NB-ARC domain protein - - - 0.00000000000008852 78.0
CH3_k127_11499638_7 NB-ARC domain protein - - - 0.0000000001311 66.0
CH3_k127_11517730_0 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle K01595 GO:0003674,GO:0003824,GO:0004611,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0008964,GO:0009060,GO:0009987,GO:0015980,GO:0016829,GO:0016830,GO:0016831,GO:0016999,GO:0017144,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045333,GO:0055114,GO:0071704,GO:0072350 4.1.1.31 0.0 1020.0
CH3_k127_11586529_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00283 - 1.4.4.2 8.479e-269 832.0
CH3_k127_11586529_1 Glycine cleavage system P-protein - - - 2.179e-225 705.0
CH3_k127_11586529_2 PFAM PfkB domain protein K00852,K00856 - 2.7.1.15,2.7.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004651 508.0
CH3_k127_11586529_3 The glycine cleavage system catalyzes the degradation of glycine K00605 GO:0001505,GO:0003674,GO:0003824,GO:0004047,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006544,GO:0006546,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0009056,GO:0009063,GO:0009069,GO:0009071,GO:0009987,GO:0016054,GO:0016740,GO:0016741,GO:0017144,GO:0019464,GO:0019752,GO:0032259,GO:0042133,GO:0042135,GO:0042737,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046395,GO:0065007,GO:0065008,GO:0071704,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 2.1.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000953 371.0
CH3_k127_11586529_4 Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides K11065 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000000000000006742 231.0
CH3_k127_11586529_5 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.00000000000000000000000000000000000000000000000000000000000007273 214.0
CH3_k127_11586529_6 Recycling of diacylglycerol produced during the turnover of membrane phospholipid K00901 - 2.7.1.107 0.000000000000000000000000000000000000000004691 158.0
CH3_k127_11642110_0 DDE superfamily endonuclease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002641 357.0
CH3_k127_11642110_1 PA domain - - - 0.00000000001328 65.0
CH3_k127_11659595_0 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 - - 0.0 1052.0
CH3_k127_11659595_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 8.517e-297 916.0
CH3_k127_11659595_10 ATP synthase I chain K02116 - - 0.00000000005904 68.0
CH3_k127_11659595_2 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007729 430.0
CH3_k127_11659595_3 Cobyrinic acid ac-diamide synthase K03496 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001834 415.0
CH3_k127_11659595_4 Belongs to the ParB family K03497 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004353 369.0
CH3_k127_11659595_5 Specifically methylates the N7 position of guanine in position 527 of 16S rRNA K03501 - 2.1.1.170 0.0000000000000000000000000000000000000000000000000000000000000000000000000001306 263.0
CH3_k127_11659595_6 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.0000000000000000000000000000000000000000000000000000000000000000001158 233.0
CH3_k127_11659595_7 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.00000000000000000000000000000000000000000000000000000001706 202.0
CH3_k127_11659595_8 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 - - 0.0000000000000000000000000000000000006662 140.0
CH3_k127_11659595_9 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.00000000000000002199 82.0
CH3_k127_11675040_0 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 1.195e-281 874.0
CH3_k127_11675040_1 Domain of unknown function DUF302 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001038 454.0
CH3_k127_11675040_10 ubiE/COQ5 methyltransferase family - - - 0.00001732 52.0
CH3_k127_11675040_2 Spermidine synthase K00797 - 2.5.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001765 336.0
CH3_k127_11675040_3 Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage K08311 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003875 303.0
CH3_k127_11675040_4 Transglycosylase SLT domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002595 274.0
CH3_k127_11675040_5 DsrE/DsrF/DrsH-like family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000276 270.0
CH3_k127_11675040_6 CNP1-like family - - - 0.000000000000000000000000000000000000000000000000000000000000000000001027 240.0
CH3_k127_11675040_7 long-chain fatty acid transport protein K06076 - - 0.000000000000000000000000000000000000000000000000000000000000000000002879 244.0
CH3_k127_11675040_8 CBS domain containing protein - - - 0.000000000000000000000000000000000000000000000000002068 188.0
CH3_k127_11675040_9 Transposase IS200 like - - - 0.00000000000000000000000000000000000000001468 158.0
CH3_k127_11833761_0 Belongs to the UPF0061 (SELO) family - - - 9.566e-226 710.0
CH3_k127_11833761_1 PFAM UMUC domain protein DNA-repair protein K03502 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002377 567.0
CH3_k127_11833761_2 Protein of unknown function (DUF1415) - - - 0.000000000000000000000000000000000000000000000000000000000000001215 224.0
CH3_k127_11833761_3 Glutaredoxin - - - 0.0000000000000000000000000000000000000000000000000006037 194.0
CH3_k127_11833761_4 Peptidase S24-like K01356 - 3.4.21.88 0.000000000000000000000000000000000000000000000000002586 188.0
CH3_k127_11833761_5 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962 - 2.1.3.15,6.4.1.2 0.0000000000000000000000000000000000000000000002365 168.0
CH3_k127_11833761_6 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000001728 159.0
CH3_k127_11833761_7 MOSC domain - - - 0.0000000000000000000000000000000001199 143.0
CH3_k127_11833761_8 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.00000000000000000000000000009116 117.0
CH3_k127_11841660_0 Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP K01525 - 3.6.1.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003098 377.0
CH3_k127_11841660_1 prohibitin homologues - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001917 361.0
CH3_k127_11841660_2 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K01802,K03767,K03768 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007483 308.0
CH3_k127_11841660_3 Acyltransferase K00655 - 2.3.1.51 0.000000000000000000000000000000000000000000000000000000000001621 218.0
CH3_k127_11841660_4 Belongs to the pseudouridine synthase RsuA family K06182 - 5.4.99.21 0.00000000000000000000000000000000000000000000000000000001647 201.0
CH3_k127_11841660_5 RelE-like toxin of type II toxin-antitoxin system HigB K07334 - - 0.00000000000000000000000000000000000000004784 152.0
CH3_k127_11841660_6 17 kDa surface antigen K06077 - - 0.0000000000000000000000000000000000000002418 151.0
CH3_k127_11841660_7 COG1585 Membrane protein implicated in regulation of membrane protease activity K07340 - - 0.000000000000000000000000000000000000005524 149.0
CH3_k127_11841660_8 Helix-turn-helix K21498 - - 0.00000000000000000000000002716 110.0
CH3_k127_11845180_0 Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02400 - - 0.0 1041.0
CH3_k127_11845180_1 PFAM GTP-binding signal recognition particle SRP54 G- domain K02404 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002135 519.0
CH3_k127_11845180_2 Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02401 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008248 491.0
CH3_k127_11845180_3 Belongs to the ParA family K04562 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004405 361.0
CH3_k127_11845180_4 PFAM MotA TolQ ExbB proton channel K02556 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005124 340.0
CH3_k127_11845180_5 Sigma-70 region 3 K02405 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003866 316.0
CH3_k127_11845180_6 Ferredoxin 2Fe-2S type, ISC system K04755 - - 0.00000000000000000000000000000000000000000000000000000008042 196.0
CH3_k127_11845180_7 Fe-S assembly protein IscX - GO:0003674,GO:0004857,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006790,GO:0008150,GO:0008152,GO:0008198,GO:0009987,GO:0016043,GO:0016226,GO:0022607,GO:0030234,GO:0031163,GO:0043086,GO:0043167,GO:0043169,GO:0044085,GO:0044092,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0050790,GO:0051186,GO:0065007,GO:0065009,GO:0071840,GO:0098772 - 0.0000000000000000000000000002829 117.0
CH3_k127_11845180_8 Chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HscB K04044 - - 0.0000000000000001495 81.0
CH3_k127_11864357_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 1.437e-285 883.0
CH3_k127_11864357_1 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses - - - 0.000006464 51.0
CH3_k127_11870092_0 ABC-type transport system involved in resistance to organic solvents permease component K02066 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004446 426.0
CH3_k127_11870092_1 ABC transporter K02065 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001179 418.0
CH3_k127_11870092_2 MlaD protein K02067 - - 0.000000000000000000000000000000000000000000000000000000000000008665 219.0
CH3_k127_11870092_3 MlaC protein K07323 - - 0.000000000000000000000000000000000000000000000002649 176.0
CH3_k127_11904641_0 PFAM Integrase, catalytic core - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001136 413.0
CH3_k127_11904641_1 PFAM Archaeal ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001255 348.0
CH3_k127_11904641_2 COG2963 Transposase and inactivated derivatives - - - 0.00000000000000000000000000000000000000000000000000005012 191.0
CH3_k127_11909479_0 Belongs to the 5'-nucleotidase family K11751,K17224 - 3.1.3.5,3.6.1.45 3.477e-302 935.0
CH3_k127_11909479_1 peptidase m48, ste24p - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002593 446.0
CH3_k127_11909479_2 Thiosulfate-oxidizing multienzyme system protein SoxA K17222 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001458 366.0
CH3_k127_11909479_3 sulfur oxidation protein SoxY K17226 - - 0.00000000000000000000000000000000000000000000000000009478 190.0
CH3_k127_11909479_4 Cytochrome C oxidase, cbb3-type, subunit III K17223 - - 0.000000000000000000000000000000000000004244 149.0
CH3_k127_11909479_5 Sulphur oxidation protein SoxZ K17227 - - 0.000000000000000000000000000000000001635 140.0
CH3_k127_11909479_6 Nucleotidyltransferase domain - - - 0.0000000000000000000000000000002587 127.0
CH3_k127_11909479_7 Nucleotidyltransferase domain - - - 0.00000000000000000000000001705 110.0
CH3_k127_119116_0 Belongs to the MurCDEF family K01924 - 6.3.2.8 1.435e-229 718.0
CH3_k127_119116_1 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001476 347.0
CH3_k127_119116_2 Cell wall formation K00075 - 1.3.1.98 0.00000000000000000000000000000000000000000000000000000000000005845 220.0
CH3_k127_11964151_0 fatty acid desaturase K00507 - 1.14.19.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003059 560.0
CH3_k127_11964151_1 mechanosensitive ion channel - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006469 508.0
CH3_k127_11964151_2 Belongs to the UPF0758 family K03630 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001129 329.0
CH3_k127_11964151_3 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005413 282.0
CH3_k127_11964151_4 PLD-like domain - - - 0.000000000000000000000000000000000000000000000000000003368 199.0
CH3_k127_11964151_5 Belongs to the bacterial ribosomal protein bL28 family K02902 - - 0.000000000000000000000000000000000000001308 147.0
CH3_k127_11964151_6 Response regulator receiver domain K03413 - - 0.00000000000000000000000000000000004851 137.0
CH3_k127_11964151_7 Belongs to the bacterial ribosomal protein bL33 family K02913 - - 0.00000000000000000000001515 100.0
CH3_k127_12031544_0 PFAM peptidase M3A and M3B, thimet oligopeptidase F K01414 - 3.4.24.70 0.0 1069.0
CH3_k127_12031544_1 DNA ligase K10747 - 6.5.1.1,6.5.1.6,6.5.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009653 480.0
CH3_k127_12031544_2 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007019 311.0
CH3_k127_12031544_3 Bacterial transferase hexapeptide (six repeats) - - - 0.000000000000000000000000000000000000000000000000000000000000000000004331 239.0
CH3_k127_12031544_4 Protein of unknown function (DUF1624) - - - 0.000000000000000000000000000000000000000000000000000000000007793 216.0
CH3_k127_12031544_5 Pfam Glutaredoxin - - - 0.00000000000000000000000000000000000002534 150.0
CH3_k127_12031544_6 DsrE/DsrF-like family K06039 - - 0.000000000000000000000006594 108.0
CH3_k127_12031544_8 - - - - 0.00000000000001466 76.0
CH3_k127_12031544_9 Involved in the biosynthesis of porphyrin-containing compound - - - 0.00002042 46.0
CH3_k127_12033679_0 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 GO:0000015,GO:0000287,GO:0003674,GO:0003824,GO:0004634,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005856,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009986,GO:0009987,GO:0016052,GO:0016053,GO:0016310,GO:0016829,GO:0016835,GO:0016836,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0032991,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042802,GO:0042866,GO:0043167,GO:0043169,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046872,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1902494 4.2.1.11 4.664e-230 717.0
CH3_k127_12033679_1 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 GO:0001775,GO:0002376,GO:0003674,GO:0003824,GO:0003883,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006213,GO:0006220,GO:0006221,GO:0006241,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008283,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009163,GO:0009165,GO:0009199,GO:0009201,GO:0009208,GO:0009209,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0015949,GO:0016874,GO:0016879,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0032943,GO:0034404,GO:0034641,GO:0034654,GO:0042098,GO:0042100,GO:0042110,GO:0042113,GO:0042221,GO:0042455,GO:0042493,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045321,GO:0046036,GO:0046131,GO:0046132,GO:0046134,GO:0046390,GO:0046483,GO:0046649,GO:0046651,GO:0050896,GO:0055086,GO:0070661,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.4.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003367 581.0
CH3_k127_12033679_2 DAHP synthetase I family K01627 - 2.5.1.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001147 477.0
CH3_k127_12033679_3 Belongs to the GcvT family K06980 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001941 392.0
CH3_k127_12033679_4 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic K05589 - - 0.000000000000000000000000000000000002339 141.0
CH3_k127_12033679_5 COG2009 Succinate dehydrogenase fumarate reductase, cytochrome b subunit K00241 - - 0.0004845 45.0
CH3_k127_12035843_0 Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs K08300 - 3.1.26.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001007 508.0
CH3_k127_12035843_1 peptidase, S49 K04773 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005506 470.0
CH3_k127_12035843_2 Responsible for synthesis of pseudouridine from uracil K06179 - 5.4.99.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004038 431.0
CH3_k127_12035843_3 HAD-superfamily hydrolase, subfamily IA, variant 1 K01091 - 3.1.3.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003003 284.0
CH3_k127_12035843_4 Uroporphyrin-iii c tetrapyrrole (Corrin porphyrin) methyltransferase K07056 - 2.1.1.198 0.000000000000000000000000000000000000000000000000000003083 193.0
CH3_k127_12035843_5 Modulator of Rho-dependent transcription termination (ROF) K19000 - - 0.000000000000000008435 87.0
CH3_k127_12046183_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07239 - - 0.0 1611.0
CH3_k127_12046183_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 2.067e-213 674.0
CH3_k127_12046183_2 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001718 523.0
CH3_k127_12046183_3 Outer membrane efflux protein K15725 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000605 493.0
CH3_k127_12046183_4 PAS fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006867 284.0
CH3_k127_12046183_5 - - - - 0.00000000000000000000000000000000000000008042 154.0
CH3_k127_12046183_6 response regulator K02485 - - 0.0000000000000000000000000000000000213 139.0
CH3_k127_12046183_7 - - - - 0.00000000000000000000000000000006275 128.0
CH3_k127_12046183_8 PFAM aminotransferase class V K00830 - 2.6.1.44,2.6.1.45,2.6.1.51 0.0000000000000000000000000000002464 123.0
CH3_k127_12238316_0 Arginyl-tRNA synthetase K01887 - 6.1.1.19 7.695e-259 809.0
CH3_k127_12238316_1 Belongs to the TPP enzyme family K01652 - 2.2.1.6 4.625e-232 731.0
CH3_k127_12238316_10 Addiction module toxin, RelE StbE family K07334 - - 0.000000000000000000000000000000000002601 139.0
CH3_k127_12238316_11 Cro/C1-type HTH DNA-binding domain - - - 0.00000000000000000000000000000000004148 136.0
CH3_k127_12238316_12 - - - - 0.00000000009722 66.0
CH3_k127_12238316_2 Cobyrinic acid ac-diamide synthase K03496 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008784 357.0
CH3_k127_12238316_3 KR domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003978 332.0
CH3_k127_12238316_4 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003806 274.0
CH3_k127_12238316_5 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000000000000000000000000000008961 233.0
CH3_k127_12238316_6 Thiol disulfide interchange protein K03673 - - 0.0000000000000000000000000000000000000000000000000000000000000002948 226.0
CH3_k127_12238316_7 PFAM Sporulation domain protein - - - 0.000000000000000000000000000000000000000000000000000002474 201.0
CH3_k127_12238316_8 PFAM Phage derived protein Gp49-like (DUF891) - - - 0.00000000000000000000000000000000000000000000000000001323 190.0
CH3_k127_12238316_9 Helix-turn-helix domain - - - 0.000000000000000000000000000000000000000008289 154.0
CH3_k127_12246782_0 HflC and HflK could regulate a protease K04087 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000247 458.0
CH3_k127_12246782_1 HflC and HflK could encode or regulate a protease K04088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009542 353.0
CH3_k127_12246782_2 Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine K02502 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003511 291.0
CH3_k127_12246782_3 protein conserved in bacteria K09937 - - 0.0000000000000000000001292 98.0
CH3_k127_12257184_0 PFAM Glutamine amidotransferase class-I K01951 - 6.3.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001402 330.0
CH3_k127_12257184_1 Protein of unknown function (DUF3025) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003204 255.0
CH3_k127_12257184_2 gag-polyprotein putative aspartyl protease - - - 0.00000000000000000000000000000000000000000000000000000727 200.0
CH3_k127_12257184_3 - - - - 0.0000000000000000001491 89.0
CH3_k127_12485673_0 DMSO reductase anchor subunit (DmsC) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001488 370.0
CH3_k127_12485673_1 4Fe-4S binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002548 334.0
CH3_k127_12485673_2 DsrE/DsrF/DrsH-like family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001041 319.0
CH3_k127_12485673_3 Belongs to the sulfur carrier protein TusA family K04085 - - 0.0000000000000000000000000000000000362 135.0
CH3_k127_12485673_4 Rhodanese Homology Domain - - - 0.00000000000000000000000000004218 120.0
CH3_k127_12496414_0 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005727 575.0
CH3_k127_12496414_1 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.0000000000000000003999 90.0
CH3_k127_12496414_2 Toxic component of a toxin-antitoxin (TA) module. An RNase K07064 GO:0005575,GO:0005576 - 0.000003062 52.0
CH3_k127_12514499_0 EAL domain - - - 9.82e-222 713.0
CH3_k127_12514499_1 Phosphoribulokinase / Uridine kinase family K00855 - 2.7.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005233 364.0
CH3_k127_12514499_2 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000725 306.0
CH3_k127_12514499_3 Belongs to the bacterial glucokinase family K00845 - 2.7.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001356 307.0
CH3_k127_12514499_4 Prokaryotic N-terminal methylation motif K02456 - - 0.000000000000000000000000000000000000000000000000000000000000000006996 229.0
CH3_k127_12514499_5 PFAM Lytic transglycosylase catalytic K08309 - - 0.00000000000000000000000000000000000000000000000000000000001392 213.0
CH3_k127_12514499_6 Type II secretory pathway pseudopilin - - - 0.00000000000000000000000000000000000000000000000000000002117 207.0
CH3_k127_12514499_7 Type II secretion system protein G K02456 - - 0.0000000000000000000000000000000000000000000001834 170.0
CH3_k127_12514499_8 type II and III secretion system protein K02453 - - 0.00000000000000006696 85.0
CH3_k127_12549426_0 dihydroorotase K01465 - 3.5.2.3 3.516e-215 676.0
CH3_k127_12549426_1 Bacterial protein of unknown function (DUF853) K06915 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006212 310.0
CH3_k127_12549426_2 Belongs to the ATCase OTCase family K00609 - 2.1.3.2 0.0000000000005527 68.0
CH3_k127_1369229_0 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 9.319e-212 664.0
CH3_k127_1369229_1 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001372 428.0
CH3_k127_1369229_2 HAD-hyrolase-like K01091 - 3.1.3.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005023 330.0
CH3_k127_1369229_3 Tetratricopeptide repeat K05838 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002357 287.0
CH3_k127_1369229_4 PFAM ApaG domain protein K06195 - - 0.00000000000000000000000000000000000000000000000000000000000009811 215.0
CH3_k127_1369229_5 - - - - 0.0000001103 57.0
CH3_k127_1425923_0 cheY-homologous receiver domain - - - 1.842e-207 657.0
CH3_k127_1425923_1 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005041 351.0
CH3_k127_1425923_2 Phosphoribosyl transferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005541 317.0
CH3_k127_1425923_3 Asparagine synthase K01953 - 6.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000001893 257.0
CH3_k127_1425923_4 PFAM metal-dependent phosphohydrolase, HD sub domain - - - 0.000000000000000000000000000000001181 134.0
CH3_k127_1439996_0 Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions K21071 - 2.7.1.11,2.7.1.90 1.656e-253 784.0
CH3_k127_1439996_1 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001798 546.0
CH3_k127_1439996_10 - - - - 0.00000000000000000000000000002425 119.0
CH3_k127_1439996_2 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001707 395.0
CH3_k127_1439996_3 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000599 362.0
CH3_k127_1439996_4 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002284 351.0
CH3_k127_1439996_5 PFAM MotA TolQ ExbB proton channel K03561 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006604 291.0
CH3_k127_1439996_6 Inorganic H+ pyrophosphatase K15987 - 3.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000001869 250.0
CH3_k127_1439996_7 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.000000000000000000000000000000000000000000000000000000003351 201.0
CH3_k127_1439996_8 Biopolymer transport protein K03559 - - 0.0000000000000000000000000000000000000000000003251 171.0
CH3_k127_1439996_9 - - - - 0.0000000000000000000000000000000000000002599 152.0
CH3_k127_1529932_0 Citrate transporter - - - 1.036e-202 640.0
CH3_k127_1529932_1 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005597 478.0
CH3_k127_1529932_2 Peptidase family M48 - - - 0.000000000000000000000000000000000000000000000000000001701 198.0
CH3_k127_1529932_3 Ribosomal protein L31 - - - 0.00000000000000000000000000000000001532 135.0
CH3_k127_153554_0 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009069 481.0
CH3_k127_153554_1 response regulator, receiver K07814 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008934 327.0
CH3_k127_153554_2 GGDEF domain K01768,K02488,K07676,K10715,K20976 GO:0000160,GO:0003674,GO:0003824,GO:0004672,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009927,GO:0009987,GO:0016020,GO:0016021,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019538,GO:0023052,GO:0031224,GO:0031226,GO:0035556,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044425,GO:0044459,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0060089,GO:0065007,GO:0071704,GO:0071944,GO:0140096,GO:1901564 2.7.13.3,2.7.7.65,4.6.1.1 0.0000000000000000000000000000001361 135.0
CH3_k127_153554_3 PFAM response regulator receiver - - - 0.0000000000000000005292 93.0
CH3_k127_153554_4 Belongs to the prokaryotic GSH synthase family K01920 - 6.3.2.3 0.0000000000009377 68.0
CH3_k127_1540712_0 Specifically methylates the 50S ribosomal protein L3 on a specific glutamine residue K07320 - 2.1.1.298 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003021 449.0
CH3_k127_1540712_1 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001725 366.0
CH3_k127_1540712_2 Belongs to the pseudouridine synthase RsuA family K06178 - 5.4.99.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003031 346.0
CH3_k127_1540712_3 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000071 316.0
CH3_k127_1540712_4 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000926 258.0
CH3_k127_1566262_0 ATPase histidine kinase DNA gyrase B HSP90 domain protein K02668 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000195 543.0
CH3_k127_1566262_1 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001983 496.0
CH3_k127_1566262_2 Belongs to the FPP GGPP synthase family K02523 - 2.5.1.90 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009996 477.0
CH3_k127_1566262_3 This protein binds to 23S rRNA in the presence of protein L20 K02888 - - 0.0000000000000000000000000000000000000000000000000000821 188.0
CH3_k127_1566262_4 PFAM sigma-54 factor interaction domain-containing protein K02667 - - 0.00000000000000000000000000000000000000000001773 166.0
CH3_k127_1566262_5 Belongs to the bacterial ribosomal protein bL27 family K02899 - - 0.00000000000000000000000000000000000000007413 151.0
CH3_k127_1566262_6 - K06950 - - 0.000000000000000007103 85.0
CH3_k127_1566262_7 - - - - 0.000449 46.0
CH3_k127_157865_0 (FHA) domain - - - 0.0000000000000000000000000000000000000000000000000000000000005857 219.0
CH3_k127_157865_1 Type IV pilus biogenesis stability protein PilW - - - 0.000000000000000000000000000000000000000000000000006272 183.0
CH3_k127_157865_2 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 0.00000000000000000000000000000000000000002938 153.0
CH3_k127_157865_3 serine threonine protein kinase K12132 - 2.7.11.1 0.00000000000000192 82.0
CH3_k127_1634288_0 VanZ like family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002472 478.0
CH3_k127_1634288_1 Parallel beta-helix repeats - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009976 446.0
CH3_k127_1634288_2 single-stranded DNA 5'-3' exodeoxyribonuclease activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002862 301.0
CH3_k127_1634288_3 Glycosyl transferase 4-like domain - - - 0.0000000000000000000000000000000000000000000000000000000004827 218.0
CH3_k127_1634288_4 PFAM VanZ family protein - - - 0.00000000000000000000000000000000000000000004792 174.0
CH3_k127_1634288_5 Glycosyltransferase like family 2 - - - 0.000000000000000000000000000000005262 140.0
CH3_k127_1634288_6 Acetyltransferase (GNAT) domain - - - 0.00000000000002216 82.0
CH3_k127_1639753_0 4fe-4S ferredoxin, iron-sulfur binding domain protein K00384,K21567 - 1.18.1.2,1.19.1.1,1.8.1.9 4.128e-197 619.0
CH3_k127_1639753_1 ferredoxin-NADP+ reductase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000341 307.0
CH3_k127_1683_0 ResB-like family - - - 1.569e-240 761.0
CH3_k127_1683_1 Cytochrome C assembly protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006438 586.0
CH3_k127_1683_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005941 435.0
CH3_k127_1683_3 PFAM Cytochrome c, class I - - - 0.000000000000000000000000000000000000000000000000000000000000000002512 232.0
CH3_k127_1683_4 Aminotransferase class-III K01845 - 5.4.3.8 0.0000000000000000000000000000000000003061 141.0
CH3_k127_1707127_0 Belongs to the UDP-N-acetylglucosamine 2-epimerase family K01791 - 5.1.3.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001782 539.0
CH3_k127_1707127_1 polysaccharide deacetylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005582 443.0
CH3_k127_1816026_0 Methyl-accepting chemotaxis protein K02660 - - 3.361e-205 660.0
CH3_k127_1816026_1 Aminotransferase K01845 - 5.4.3.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006043 520.0
CH3_k127_1816026_2 Histidine kinase K02487,K06596 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001036 529.0
CH3_k127_1816026_3 Phosphomethylpyrimidine kinase K00941 - 2.7.1.49,2.7.4.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007927 422.0
CH3_k127_1816026_4 RESPONSE REGULATOR receiver K02657 - - 0.00000000000000000000000000000000000000000000000000000000000000000004375 233.0
CH3_k127_1816026_5 Thiamine monophosphate synthase K00788 - 2.5.1.3 0.000000000000000000000000000000000000000000000000000000000001774 216.0
CH3_k127_1816026_6 RESPONSE REGULATOR receiver K02658 - - 0.000000000000000000000000000000000000000000000000000000001323 201.0
CH3_k127_1816026_7 PFAM CheW domain protein K02659 - - 0.0000000000000000000000000000000000000000000003165 173.0
CH3_k127_1816026_8 Rubredoxin - - - 0.000000000000000000000000002549 113.0
CH3_k127_1818759_0 Methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007824 451.0
CH3_k127_1818759_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000254 436.0
CH3_k127_1818759_2 Copper chaperone PCu(A)C K09796 - - 0.00000000000000000000000000000000224 134.0
CH3_k127_1818759_3 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.00000000005319 63.0
CH3_k127_1818894_0 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 - 1.17.7.1,1.17.7.3 2.455e-194 611.0
CH3_k127_1818894_1 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 - 2.1.1.192 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004225 597.0
CH3_k127_1818894_2 Type IV pilus biogenesis stability protein PilW K02656 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004312 265.0
CH3_k127_1818894_3 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 - 2.7.4.6 0.00000000000000000000000000000000000000000000000000000000000000000000000001812 252.0
CH3_k127_1818894_4 Transcriptional regulator K15539 - - 0.00000000000000000000000000000000000000000000000000003497 198.0
CH3_k127_1818894_5 Sporulation related domain K03749 - - 0.00000000000000000000000000000000006985 142.0
CH3_k127_1818894_6 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.000000000000000000000000000000001079 132.0
CH3_k127_1821943_0 PFAM cell divisionFtsK SpoIIIE K03466 - - 4.039e-310 964.0
CH3_k127_1844167_0 Methyl-viologen-reducing hydrogenase, delta subunit K16886 - - 0.0 1253.0
CH3_k127_1844167_1 Inorganic H+ pyrophosphatase K15987 - 3.6.1.1 0.0 1058.0
CH3_k127_1844167_2 Glucose inhibited division protein A K03388,K16885 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 1.306e-233 728.0
CH3_k127_1844167_3 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions K01507 - 3.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005678 347.0
CH3_k127_1844167_4 Calcineurin-like phosphoesterase superfamily domain K07095 - - 0.0000000000000000000000000000000000000000000000000000000000000000001062 234.0
CH3_k127_1844167_5 4Fe-4S dicluster domain K03390,K16887 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.00000000000000000000000000001734 118.0
CH3_k127_1845865_0 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 3.839e-233 726.0
CH3_k127_1845865_1 Domain of unknown function (DUF4143) K07133 - - 0.00000000000000000000000000000000000000000000000000000000000000000001044 239.0
CH3_k127_1845865_2 - - - - 0.0000000000000002306 82.0
CH3_k127_1851919_0 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000726 526.0
CH3_k127_1851919_1 Belongs to the peptidase S11 family K01286,K07258 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001429 516.0
CH3_k127_1851919_2 PFAM Aminotransferase, class IV K00824 - 2.6.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001745 416.0
CH3_k127_1851919_3 Catalyzes cross-linking of the peptidoglycan cell wall K05515 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001056 300.0
CH3_k127_1851919_4 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002265 302.0
CH3_k127_1851919_5 Belongs to the UPF0250 family K09158 - - 0.000000000000000000000000000004251 122.0
CH3_k127_1860087_0 general secretion pathway protein D K02453 - - 5.452e-302 938.0
CH3_k127_1860087_1 type II secretion system protein E K02454,K02652,K12276 - - 4.189e-199 624.0
CH3_k127_1860087_2 protein transport across the cell outer membrane K02452,K02463 - - 0.000000000000000000000000000000000000000000000000000000000002807 218.0
CH3_k127_1860087_3 Belongs to the peptidase S8 family - - - 0.00000000000000001559 92.0
CH3_k127_1860384_0 serine threonine protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003659 381.0
CH3_k127_1860384_1 dehydrogenase reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005154 363.0
CH3_k127_1860384_2 protein phosphatase 2C domain protein K20074 - 3.1.3.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003934 306.0
CH3_k127_1860384_3 squalene-associated FAD-dependent desaturase K21677 - 1.17.8.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001383 284.0
CH3_k127_1860384_4 FHA domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004219 245.0
CH3_k127_1867963_0 AsmA family K07289 - - 8.428e-216 693.0
CH3_k127_1867963_1 Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. Also shows phosphatase, 2'- nucleotidase and 2',3'-cyclic phosphodiesterase activities. These phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases K00974 - 2.7.7.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002978 559.0
CH3_k127_1867963_2 Phage derived protein Gp49-like (DUF891) - - - 0.0000000000000000000000000000000001633 134.0
CH3_k127_1867963_3 Helix-turn-helix domain - - - 0.00000000000000000000000002844 110.0
CH3_k127_1867963_4 PQ loop repeat K15383 - - 0.0000000000000000000000003126 108.0
CH3_k127_1910851_0 Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate K01952 GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0004642,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0017076,GO:0018130,GO:0019438,GO:0019637,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0046872,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0097159,GO:0097367,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.3.5.3 0.0 1235.0
CH3_k127_1910851_1 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758 - 4.2.1.136 1.594e-197 628.0
CH3_k127_1910851_2 - - - - 0.000000000000000000000000003883 113.0
CH3_k127_1910851_3 Domain of unknown function (DUF3330) - - - 0.000000000000005915 77.0
CH3_k127_1942948_0 Sulfate transporter antisigma-factor antagonist STAS - - - 0.0 1073.0
CH3_k127_1942948_1 NADH ubiquinone plastoquinone (Complex I) - - - 0.0 1015.0
CH3_k127_1980935_0 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007806 294.0
CH3_k127_1980935_1 Psort location Cytoplasmic, score 8.96 K01755 - 4.3.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000008807 239.0
CH3_k127_1980935_2 MarR family - - - 0.00000000000000000000000000000000000000000000000000000000001961 211.0
CH3_k127_1980935_3 Belongs to the frataxin K06202 - - 0.0000000000000000000000000000002149 125.0
CH3_k127_202879_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005173 496.0
CH3_k127_202879_1 TIGRFAM malonyl CoA-acyl carrier protein transacylase K00645,K13935,K15355 - 2.3.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002203 433.0
CH3_k127_2041359_0 Permease MlaE K02066 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001085 384.0
CH3_k127_2041359_1 AAA domain, putative AbiEii toxin, Type IV TA system K02065 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001465 319.0
CH3_k127_2041359_2 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07305,K12267 GO:0003674,GO:0003824,GO:0008113,GO:0008150,GO:0008152,GO:0009405,GO:0016491,GO:0016667,GO:0016671,GO:0044419,GO:0051704,GO:0055114 1.8.4.11,1.8.4.12 0.000000000000000000000000000000000000000000000000000000000000000000006357 236.0
CH3_k127_2041359_3 MlaD protein K02067 - - 0.00000000000000000000000000000000000000000000000000000000002403 218.0
CH3_k127_2041359_4 - - - - 0.000000000000000000000000000000000000000009659 159.0
CH3_k127_2041359_5 Belongs to the ArsC family K00537 - 1.20.4.1 0.00000000000000000000000000000000000000005843 154.0
CH3_k127_2041359_6 ABC-type transport auxiliary lipoprotein component K18480 - - 0.00000000000000000000000000000000002344 143.0
CH3_k127_2041359_7 Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls K01439 - 3.5.1.18 0.0000000001903 61.0
CH3_k127_2056776_0 Diguanylate cyclase - - - 2.597e-262 826.0
CH3_k127_2056776_1 HDOD domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006076 579.0
CH3_k127_2056776_2 Belongs to the RNA methyltransferase TrmD family K00554 - 2.1.1.228 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001949 422.0
CH3_k127_2056776_3 Beta-lactamase enzyme family K07262 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005504 309.0
CH3_k127_2056776_4 Ribosomal protein L19 K02884 - - 0.00000000000000000000000000000000000000000000000000000000000001076 216.0
CH3_k127_2056776_5 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.0000000000000000000000000000000000000000000000000000000001392 207.0
CH3_k127_2056776_6 Belongs to the bacterial ribosomal protein bS16 family K02959 - - 0.000000000000000000000000000000000005158 137.0
CH3_k127_2056776_7 Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring K01935 - 6.3.3.3 0.000000000000008379 74.0
CH3_k127_2056776_8 6-O-methylguanine DNA methyltransferase, DNA binding domain K00567 - 2.1.1.63 0.00000001803 58.0
CH3_k127_2110421_0 Respiratory nitrate reductase beta C-terminal K00371 - 1.7.5.1 1.129e-315 969.0
CH3_k127_2110421_1 Respiratory nitrate reductase alpha N-terminal K00370 - 1.7.5.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001084 572.0
CH3_k127_2110421_2 Nitrate reductase K00373 - - 0.000000000000000000000000000000000000000000000000000000000676 205.0
CH3_k127_2172893_0 Type II secretion system (T2SS), protein E, N-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002582 547.0
CH3_k127_2172893_1 Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress K04083 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003474 403.0
CH3_k127_2172893_10 PFAM Ankyrin K10799 - 2.4.2.30 0.0000000001987 65.0
CH3_k127_2172893_2 Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5- dihydroxy-2-cyclopenten-1-yl) moiety of the queuosine in the wobble position of the QUC anticodon K01894 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009964 371.0
CH3_k127_2172893_3 Indole-3-glycerol phosphate synthase K01609 GO:0003674,GO:0003824,GO:0004425,GO:0016829,GO:0016830,GO:0016831 4.1.1.48 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004544 346.0
CH3_k127_2172893_4 Pyridine nucleotide-disulphide oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002352 259.0
CH3_k127_2172893_5 Belongs to the thioredoxin family K03671 - - 0.000000000000000000000000000000000000000000000000000000001282 202.0
CH3_k127_2172893_6 - - - - 0.000000000000000000000000000000000000000000778 162.0
CH3_k127_2172893_7 Phage-associated protein - - - 0.0000000000000000000000000000000000001104 147.0
CH3_k127_2172893_8 - - - - 0.0000000000000001468 85.0
CH3_k127_2172893_9 - - - - 0.000000000002031 69.0
CH3_k127_2290703_0 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001901 362.0
CH3_k127_2290703_1 Glutathione-dependent formaldehyde-activating enzyme - - - 0.000000000000000000000000000000000000000000005897 167.0
CH3_k127_2290703_2 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 GO:0000166,GO:0003674,GO:0003824,GO:0004764,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019632,GO:0019752,GO:0032787,GO:0036094,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050661,GO:0050662,GO:0055114,GO:0071704,GO:0097159,GO:1901265,GO:1901363,GO:1901576,GO:1901615 1.1.1.25 0.00000000000000000000000487 103.0
CH3_k127_2290703_3 nuclease - - - 0.00000000000000000000274 94.0
CH3_k127_2290703_5 PFAM Abortive infection protein K07052 - - 0.00000000357 66.0
CH3_k127_2298846_0 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 9.48e-257 797.0
CH3_k127_2298846_1 Catalyzes cross-linking of the peptidoglycan cell wall K05515 - 3.4.16.4 3.303e-231 722.0
CH3_k127_2298846_2 Cell shape determining protein, MreB Mrl family K03569 - - 1.43e-208 650.0
CH3_k127_2298846_3 Involved in formation and maintenance of cell shape K03570 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002966 331.0
CH3_k127_2298846_4 Rod shape-determining protein MreD K03571 - - 0.0000000000000000000000000000000000000000007154 164.0
CH3_k127_2298846_5 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000002626 142.0
CH3_k127_2301238_0 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000333 607.0
CH3_k127_2301238_1 Peptidoglycan polymerase that is essential for cell division K03588 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001955 572.0
CH3_k127_2301238_2 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003231 569.0
CH3_k127_2301238_3 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929,K15792 - 6.3.2.10,6.3.2.13 0.0000000000000000000000000007182 114.0
CH3_k127_2301460_0 Sh3 type 3 domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004162 557.0
CH3_k127_2301460_1 abc transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003964 381.0
CH3_k127_2301460_2 Outer membrane lipoprotein-sorting protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000192 359.0
CH3_k127_2301460_3 Belongs to the ABC transporter superfamily K02031,K02032 - - 0.000000000000000000002528 94.0
CH3_k127_2329796_0 Large family of predicted nucleotide-binding domains K07175 - - 1.846e-236 737.0
CH3_k127_2329796_1 Nad-dependent epimerase dehydratase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001094 599.0
CH3_k127_2329796_2 polysaccharide deacetylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001587 477.0
CH3_k127_2329796_3 Taurine catabolism dioxygenase TauD, TfdA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007613 386.0
CH3_k127_2329796_4 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03564 - 1.11.1.15 0.000000000000000000000000000000000000000000000000000000000000001364 221.0
CH3_k127_2329796_5 DNA polymerase - - - 0.000000000000000000000000000000000000000000000000001102 189.0
CH3_k127_2329796_6 Protein of unknown function DUF86 - - - 0.00000000000000000000000000000000000000002287 157.0
CH3_k127_2329796_7 - - - - 0.000000000000000000000000000000000003856 144.0
CH3_k127_2329796_8 Sulfurtransferase K01011 - 2.8.1.1,2.8.1.2 0.00000000000001089 73.0
CH3_k127_2396703_0 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family K00382 - 1.8.1.4 3.916e-213 670.0
CH3_k127_2396703_1 Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source K02224 - 6.3.5.11,6.3.5.9 8.758e-208 655.0
CH3_k127_2396703_2 Polysulphide reductase, NrfD K00185 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003179 512.0
CH3_k127_2396703_3 Iron-sulphur cluster biosynthesis K13628 - - 0.000000000000000000000000000009013 123.0
CH3_k127_2396703_4 Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme K02302 - 1.3.1.76,2.1.1.107,4.99.1.4 0.0000000000001539 71.0
CH3_k127_2414202_0 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 7.341e-241 763.0
CH3_k127_2414202_1 glycyl-tRNA synthetase alpha subunit K01878 - 6.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002302 597.0
CH3_k127_2414202_2 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003133 554.0
CH3_k127_2414202_3 TIGRFAM histidinol-phosphate phosphatase family protein K03273 - 3.1.3.82,3.1.3.83 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003296 290.0
CH3_k127_2427814_0 Abc transporter K06147 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006571 441.0
CH3_k127_2427814_1 TIGRFAM cytochrome c-type biogenesis protein CcmI K02200 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005367 319.0
CH3_k127_2427814_2 Periplasmic protein thiol K02199 - - 0.0000000000000000000000000000000000000000000000000000005757 195.0
CH3_k127_2427814_3 Sel1 domain protein repeat-containing protein K07126 - - 0.00000000000000000000000000000000000000000000431 176.0
CH3_k127_2427814_4 subunit of a heme lyase K02200 - - 0.000000000000000000000000000000000000000008273 158.0
CH3_k127_2427814_5 Tetratricopeptide repeat - - - 0.000000000000000000000004384 114.0
CH3_k127_2440769_0 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 5.843e-226 701.0
CH3_k127_2440769_1 AAA domain K07133 - - 8.656e-204 640.0
CH3_k127_2440769_10 Domain of unknown function (DUF4340) - - - 0.00000000000000000000000000000000000000000000000000000000000006508 223.0
CH3_k127_2440769_11 Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein K02494 - - 0.000000000000000000000000000000000000000188 157.0
CH3_k127_2440769_2 SMART Tetratricopeptide domain protein - - - 4.023e-195 625.0
CH3_k127_2440769_3 transport system - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002395 586.0
CH3_k127_2440769_4 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001275 562.0
CH3_k127_2440769_5 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 - 2.7.1.148 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006136 411.0
CH3_k127_2440769_6 PFAM ABC transporter K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004078 404.0
CH3_k127_2440769_7 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008346 308.0
CH3_k127_2440769_8 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001694 291.0
CH3_k127_2440769_9 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 - 3.1.1.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001456 281.0
CH3_k127_2536854_0 Catalyzes the transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA K06917 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003782 456.0
CH3_k127_2536854_1 Belongs to the MEMO1 family K06990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007698 349.0
CH3_k127_2536854_2 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) K00991,K12506 - 2.7.7.60,4.6.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002899 300.0
CH3_k127_2536854_3 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000008146 286.0
CH3_k127_2536854_4 YgbB family K01770 - 4.6.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000008997 250.0
CH3_k127_2536854_5 Protein required for attachment to host cells - - - 0.00000000000000000000000000000000000000000000000000001194 192.0
CH3_k127_2536854_6 LigT like Phosphoesterase - - - 0.00000000000000000000000000000000000000000000000000004523 194.0
CH3_k127_2536854_7 PFAM AMMECR1 domain protein - - - 0.0000000000000000000000005388 108.0
CH3_k127_2539337_0 COG2148 Sugar transferases involved in lipopolysaccharide synthesis K03606 - - 9.643e-235 733.0
CH3_k127_2539337_1 protein involved in exopolysaccharide biosynthesis - - - 5.72e-220 693.0
CH3_k127_2539337_2 AAA domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002065 408.0
CH3_k127_2539337_3 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001009 390.0
CH3_k127_2539337_4 Viral (Superfamily 1) RNA helicase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003081 374.0
CH3_k127_2539337_5 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001434 337.0
CH3_k127_2539337_6 PFAM polysaccharide export protein K01991 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001133 269.0
CH3_k127_2539337_8 Polysaccharide biosynthesis protein K01784,K12448 - 5.1.3.2,5.1.3.5 0.00000000000000000000000000000002023 126.0
CH3_k127_2539337_9 protein secretion K20276 - - 0.00000000187 66.0
CH3_k127_2732106_0 Belongs to the cysteine synthase cystathionine beta- synthase family K12339 GO:0000003,GO:0000096,GO:0000097,GO:0000902,GO:0000904,GO:0003006,GO:0003674,GO:0003824,GO:0004124,GO:0005488,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005773,GO:0005774,GO:0005777,GO:0005829,GO:0005886,GO:0006082,GO:0006520,GO:0006534,GO:0006535,GO:0006563,GO:0006790,GO:0006807,GO:0007568,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009507,GO:0009532,GO:0009536,GO:0009566,GO:0009567,GO:0009570,GO:0009653,GO:0009826,GO:0009856,GO:0009860,GO:0009932,GO:0009987,GO:0010035,GO:0010038,GO:0016020,GO:0016043,GO:0016049,GO:0016053,GO:0016740,GO:0016765,GO:0019344,GO:0019752,GO:0019842,GO:0019953,GO:0022414,GO:0030154,GO:0030170,GO:0031090,GO:0032501,GO:0032502,GO:0032989,GO:0036094,GO:0040007,GO:0042221,GO:0042579,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0044706,GO:0046394,GO:0046686,GO:0048037,GO:0048046,GO:0048468,GO:0048588,GO:0048589,GO:0048856,GO:0048868,GO:0048869,GO:0050662,GO:0050896,GO:0051704,GO:0060560,GO:0070279,GO:0071704,GO:0071840,GO:0071944,GO:0097159,GO:0098588,GO:0098805,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.5.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008485 513.0
CH3_k127_2732106_1 TIGRFAM Mannose-1-phosphate guanylyltransferase mannose-6-phosphate isomerase K00971,K16011 - 2.7.7.13,5.3.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002284 486.0
CH3_k127_2732106_2 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005653 306.0
CH3_k127_2732106_3 Catalyzes the interconversion between ADP-D-glycero- beta-D-manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose K03274 - 5.1.3.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002574 269.0
CH3_k127_2732106_4 Competence protein ComEA K02237 GO:0005575,GO:0005623,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0044464 - 0.000000000000000000000000001573 114.0
CH3_k127_2749837_0 TIGRFAM Diguanylate cyclase - - - 8.535e-200 667.0
CH3_k127_2749837_1 PFAM histone deacetylase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001899 477.0
CH3_k127_2749837_2 S4 domain K14761 - - 0.0000000000000000000000000003659 114.0
CH3_k127_2749837_3 Peptidase dimerisation domain - - - 0.00000000000000000000002715 99.0
CH3_k127_2762426_0 RNA polymerase K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005322 276.0
CH3_k127_2762426_1 Permease, YjgP YjgQ family K11720 - - 0.00000000000000000000000000000000000000000000000000000000000000001865 226.0
CH3_k127_2762426_2 Acetolactate synthase K01652 - 2.2.1.6 0.00000000000000000000000000000000000000000000000000007396 188.0
CH3_k127_2762426_3 PFAM RDD domain containing protein - - - 0.00000000000000000000000000000000000000000005777 166.0
CH3_k127_2762426_4 Protein of unknown function (DUF3106) - - - 0.000000000000000000000000001779 117.0
CH3_k127_2762426_5 Protein of unknown function (DUF3619) - - - 0.000000000006163 71.0
CH3_k127_2772902_0 Major Facilitator - - - 1.287e-242 753.0
CH3_k127_2772902_1 Murein-degrading enzyme that degrades murein glycan strands and insoluble, high-molecular weight murein sacculi, with the concomitant formation of a 1,6-anhydromuramoyl product. Lytic transglycosylases (LTs) play an integral role in the metabolism of the peptidoglycan (PG) sacculus. Their lytic action creates space within the PG sacculus to allow for its expansion as well as for the insertion of various structures such as secretion systems and flagella K18691 GO:0005575,GO:0005623,GO:0009279,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0044462,GO:0044464,GO:0071944 - 1.663e-196 623.0
CH3_k127_2772902_2 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001149 487.0
CH3_k127_2772902_3 Methyltransferase type 11 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004061 249.0
CH3_k127_2772902_4 DsrE/DsrF-like family K06039 - - 0.00000000000000000000001765 105.0
CH3_k127_2884515_0 Putative diguanylate phosphodiesterase - - - 1.296e-305 964.0
CH3_k127_2884515_1 PFAM ATP-binding region ATPase domain protein K07645 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000251 436.0
CH3_k127_2884515_10 Domain of unknown function (DUF1924) - - - 0.000000000000000000000000000000000002276 142.0
CH3_k127_2884515_2 Cytochrome b/b6/petB - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004999 395.0
CH3_k127_2884515_3 PhoU domain K02039 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002347 352.0
CH3_k127_2884515_4 Transcriptional regulatory protein, C terminal K02483 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002269 339.0
CH3_k127_2884515_5 import inner membrane translocase, subunit Tim44 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000009557 278.0
CH3_k127_2884515_6 PFAM Di-haem cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000000000000009965 222.0
CH3_k127_2884515_7 Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate K01807 - 5.3.1.6 0.0000000000000000000000000000000000000000000000000000000000004461 211.0
CH3_k127_2884515_8 ABC transporter, phosphonate, periplasmic substrate-binding protein K02044 - - 0.00000000000000000000000000000000000000000000007815 178.0
CH3_k127_2884515_9 Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes - - - 0.00000000000000000000000000000000000002485 145.0
CH3_k127_288800_0 Glutaminyl-tRNA synthetase K01886 - 6.1.1.18 5e-324 996.0
CH3_k127_288800_1 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 - 6.1.1.16 2.676e-257 797.0
CH3_k127_288800_2 ErfK YbiS YcfS YnhG family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004993 525.0
CH3_k127_288800_3 PFAM TPR repeat-containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008189 369.0
CH3_k127_288800_4 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03768 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008578 268.0
CH3_k127_288800_5 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K01802,K03767,K03768 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000001422 224.0
CH3_k127_288800_6 Diguanylate cyclase - - - 0.00000000000000000000000000000000000003108 159.0
CH3_k127_288800_7 Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K03269 - 3.6.1.54 0.000000000000000000000000000000001971 132.0
CH3_k127_2893911_0 Flavin reductase like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001741 283.0
CH3_k127_2893911_1 Ankyrin repeats (many copies) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000007469 241.0
CH3_k127_2893911_2 Flagellar protein YcgR - - - 0.00000000000000000000000000000000005282 143.0
CH3_k127_2893911_3 Binds the second messenger bis-(3'-5') cyclic dimeric guanosine monophosphate (c-di-GMP). Can bind two c-di-GMP molecules per monomer. May play a role in bacterial second- messenger regulated processes. Binding to c-di-GMP induces a conformational change of the C- and N-termini resulting in the exposure of a highly negative surface on one side of the protein to a - - - 0.000000000000000000000001056 108.0
CH3_k127_2893911_4 - - - - 0.00001053 49.0
CH3_k127_2894153_0 transmembrane transport K02035,K13893 - - 2.127e-214 681.0
CH3_k127_2894153_1 PFAM binding-protein-dependent transport systems inner membrane component K13894 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001354 510.0
CH3_k127_2894153_2 Enoyl- acyl-carrier-protein reductase NADH K00208 - 1.3.1.10,1.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001781 475.0
CH3_k127_2894153_3 peptidylprolyl isomerase K03770 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005093 460.0
CH3_k127_2894153_4 ABC transporter permease protein K13895 - - 0.00000000000000000000000000000000000000000008738 162.0
CH3_k127_3020248_0 Belongs to the UPF0301 (AlgH) family K07735 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005569 277.0
CH3_k127_3020248_1 Phosphoribosyl transferase domain K02825 - 2.4.2.9 0.0000000000000000000000000000000000000000000000000000000000006325 216.0
CH3_k127_3020248_2 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 - - 0.00000000000000000000000000000000000000000000000001472 184.0
CH3_k127_3020248_3 Methyltransferase domain - - - 0.0000000000000000000000005081 115.0
CH3_k127_3020248_4 Polysaccharide biosynthesis/export protein K01991 - - 0.000000000000000006435 95.0
CH3_k127_3020248_5 protein involved in exopolysaccharide biosynthesis K16554 - - 0.000000000000001238 90.0
CH3_k127_3020248_6 serine acetyltransferase K00640,K03819 - 2.3.1.30 0.00000000000003223 81.0
CH3_k127_3020248_7 Psort location CytoplasmicMembrane, score - - - 0.0000000002154 70.0
CH3_k127_3020248_8 PFAM aspartate ornithine carbamoyltransferase Asp Orn-binding region K00609 - 2.1.3.2 0.0000004232 51.0
CH3_k127_3047435_0 May be involved in recombinational repair of damaged DNA K03631 - - 2.116e-205 654.0
CH3_k127_3047435_1 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006197 489.0
CH3_k127_3047435_10 - - - - 0.0000000000000017 76.0
CH3_k127_3047435_2 Catalyzes the ferrous insertion into protoporphyrin IX K01772 - 4.99.1.1,4.99.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000737 480.0
CH3_k127_3047435_3 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002821 428.0
CH3_k127_3047435_4 PFAM EAL domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003358 424.0
CH3_k127_3047435_5 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008839,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016627,GO:0016628,GO:0019752,GO:0019877,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576 1.17.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004542 416.0
CH3_k127_3047435_6 TIGRFAM carbamoyl-phosphate synthase, small subunit K01956 - 6.3.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002119 368.0
CH3_k127_3047435_7 Ferric uptake regulator family K03711 - - 0.00000000000000000000000000000000000000000000000000000000000000000001152 235.0
CH3_k127_3047435_8 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K06186 - - 0.00000000000000000000000000000000002143 147.0
CH3_k127_3047435_9 InterPro IPR007367 - - - 0.00000000000000000000000004641 111.0
CH3_k127_3048016_0 DDE superfamily endonuclease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000454 362.0
CH3_k127_3048016_1 Transposase - - - 0.000000000000009593 76.0
CH3_k127_3187178_0 (Lipo)protein K07287 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006895 537.0
CH3_k127_3187178_1 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002537 485.0
CH3_k127_3187178_2 Beta-lactamase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001051 357.0
CH3_k127_3187178_3 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005483 267.0
CH3_k127_3187178_4 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03564 - 1.11.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000007741 244.0
CH3_k127_3187178_5 Peptidyl-prolyl cis-trans isomerase K03775 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000001548 215.0
CH3_k127_3187178_6 - - - - 0.0000000000000000000000000000000000000000000000002372 182.0
CH3_k127_3218112_0 TIGRFAM TIGR03032 family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001017 445.0
CH3_k127_3218112_1 Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella K02406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001183 422.0
CH3_k127_3218112_2 Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end K02407 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000612 330.0
CH3_k127_3218112_3 serine acetyltransferase K00640 - 2.3.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001631 273.0
CH3_k127_3218112_4 flagellar protein FlaG K06603 - - 0.00000000000000000001355 96.0
CH3_k127_3218112_5 Acetyltransferase (GNAT) domain - - - 0.00000000000000001334 91.0
CH3_k127_3218112_6 Belongs to the DegT DnrJ EryC1 family K02805 - 2.6.1.59 0.0000000000531 63.0
CH3_k127_3223632_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 2.053e-224 703.0
CH3_k127_3223632_1 Belongs to the LOG family K06966 - 3.2.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000792 406.0
CH3_k127_3223632_2 Protein of unknown function (DUF2782) - - - 0.0000000000000000000000000000000001373 135.0
CH3_k127_3294384_0 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 2.337e-211 665.0
CH3_k127_3294384_1 Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity K00765 - 2.4.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001789 352.0
CH3_k127_3294384_10 lipolytic protein G-D-S-L family - - - 0.00000000001156 76.0
CH3_k127_3294384_11 Psort location Periplasmic, score 9.44 - - - 0.00002534 56.0
CH3_k127_3294384_12 ADP-heptose-lipopolysaccharide heptosyltransferase activity - - - 0.0008696 50.0
CH3_k127_3294384_2 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007766 333.0
CH3_k127_3294384_3 Glycosyltransferase family 9 (heptosyltransferase) K02843 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004295 314.0
CH3_k127_3294384_4 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000000000000000000000000000000000000000003025 225.0
CH3_k127_3294384_5 Sulfotransferase domain - - - 0.0000000000000000000000000000000000000000000000007574 184.0
CH3_k127_3294384_6 Belongs to the BolA IbaG family - - - 0.000000000000000000000000000001135 122.0
CH3_k127_3294384_8 - - - - 0.000000000000000000000000009054 124.0
CH3_k127_3329662_0 PFAM sigma-54 factor interaction domain-containing protein K06714 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006645 464.0
CH3_k127_3329662_1 - - - - 0.00000000000007241 83.0
CH3_k127_3329662_2 - - - - 0.00000002359 59.0
CH3_k127_3329662_3 Histidine kinase - - - 0.00002395 55.0
CH3_k127_3374266_0 UPF0313 protein - - - 3.558e-239 746.0
CH3_k127_3374266_2 - - - - 0.000000007125 58.0
CH3_k127_3375443_0 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008095 501.0
CH3_k127_3375443_1 chemotaxis K03406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008111 480.0
CH3_k127_3375443_2 COG1051 ADP-ribose pyrophosphatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004246 319.0
CH3_k127_3375443_3 Belongs to the DnaA family K10763 - - 0.000000000000000000000000000000000000000000000000000000000000000000000007301 248.0
CH3_k127_3381733_0 Diguanylate cyclase K03320 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005701 532.0
CH3_k127_3381733_1 Protein of unknown function (DUF4080) - - - 0.000000000000000000000000000000000000001102 151.0
CH3_k127_3381733_3 alcohol dehydrogenase K00001 - 1.1.1.1 0.000000000000001592 79.0
CH3_k127_3415496_0 PFAM peptidase M48 Ste24p - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003259 364.0
CH3_k127_3415496_1 Diguanylate cyclase phosphodiesterase with PAS PAC sensor(S) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005412 305.0
CH3_k127_3415496_2 Sigma 54 modulation protein / S30EA ribosomal protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001345 256.0
CH3_k127_3415496_3 Bacterial SH3 domain - - - 0.000000000000000000000000000000000000004214 148.0
CH3_k127_3417048_0 Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties K00688 - 2.4.1.1 0.0 1238.0
CH3_k127_3417048_1 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate K00931 - 2.7.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001582 586.0
CH3_k127_3417048_2 Histidine Phosphotransfer domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006122 448.0
CH3_k127_3417048_3 PFAM RNA-binding S4 domain protein K04762 - - 0.0000000000000000000000000000000000000000000000004146 178.0
CH3_k127_3417048_4 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.00000000000000000000000000000000006255 135.0
CH3_k127_3417048_5 PIN domain - - - 0.000158 44.0
CH3_k127_3465233_0 Sulfate transporter antisigma-factor antagonist STAS - - - 0.0 1006.0
CH3_k127_3465233_1 Sulfate transporter antisigma-factor antagonist STAS K03321 - - 3.098e-295 914.0
CH3_k127_3465233_2 Bacterial extracellular solute-binding protein K02012 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000832 520.0
CH3_k127_3465233_3 Bacterial transferase hexapeptide (six repeats) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001583 306.0
CH3_k127_3465233_4 Chromate resistance - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006263 289.0
CH3_k127_3465233_5 Binding-protein-dependent transport system inner membrane component K02011 - - 0.0000000000000000000001737 100.0
CH3_k127_3465233_6 Sigma-54 interaction domain - - - 0.00000000000000003567 81.0
CH3_k127_348869_0 Outer membrane protein transport protein (OMPP1/FadL/TodX) - - - 1.638e-194 613.0
CH3_k127_348869_1 DsrE/DsrF/DrsH-like family - - - 0.00000000000000000000000000000000000000000000000000000000000000000006773 230.0
CH3_k127_3521231_0 Ribonucleoside-triphosphate reductase K21636 - 1.1.98.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000188 458.0
CH3_k127_3521231_1 PFAM NnrS family protein K07234 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003496 463.0
CH3_k127_3521231_2 TIGRFAM sulfur relay protein, TusE DsrC DsvC family K11179 - - 0.0000000000000000000000000000000001837 132.0
CH3_k127_3528006_0 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 0.0 1045.0
CH3_k127_3528006_1 Chemotaxis protein CheA K03407 - 2.7.13.3 1.811e-196 630.0
CH3_k127_3528006_2 PFAM EAL domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002165 552.0
CH3_k127_3528006_3 Response regulator receiver K03415 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008777 475.0
CH3_k127_3528006_4 Response regulator receiver K03415 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002822 458.0
CH3_k127_3528006_5 Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P) K03414 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001287 299.0
CH3_k127_3528006_6 chemotaxis protein chey K03413 GO:0000287,GO:0001539,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006468,GO:0006473,GO:0006475,GO:0006793,GO:0006796,GO:0006807,GO:0006928,GO:0006935,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009605,GO:0009987,GO:0016310,GO:0016407,GO:0016740,GO:0016746,GO:0016747,GO:0018193,GO:0018205,GO:0018393,GO:0018394,GO:0019538,GO:0023014,GO:0023052,GO:0036211,GO:0040011,GO:0042221,GO:0042330,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0043543,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0048870,GO:0050789,GO:0050794,GO:0050896,GO:0051179,GO:0051674,GO:0051716,GO:0065007,GO:0071704,GO:0071973,GO:0097588,GO:1901564 - 0.0000000000000000000000000000000000000000000000000000000000000001314 222.0
CH3_k127_3528006_7 CcdB protein K19163 - - 0.00000000000000000000000000000000000002855 150.0
CH3_k127_3528006_8 2Fe-2S iron-sulfur cluster binding domain K00523 - 1.17.1.1 0.0000000000000000000000000006174 118.0
CH3_k127_3539432_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K18303 - - 0.0 1693.0
CH3_k127_3539432_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001346 454.0
CH3_k127_3539432_2 Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008134 385.0
CH3_k127_3539432_3 Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group K02227 - 6.3.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007668 351.0
CH3_k127_3539432_4 membrane-bound lytic murein transglycosylase K08304 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001839 339.0
CH3_k127_3539432_5 6-pyruvoyl tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.0000000000000000000000000000000000000000000000000000000000000000000001265 241.0
CH3_k127_3539432_6 Membrane - - - 0.000000000000000000000000000000000000000000000000000000000000000001886 233.0
CH3_k127_3539432_7 Belongs to the aspartokinase family K00928 GO:0003674,GO:0003824,GO:0004072,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0019202,GO:0019752,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576 2.7.2.4 0.000000000000000000000000000000000000000004849 155.0
CH3_k127_3539432_8 Transcriptional regulator - - - 0.00000000000000000000000000000000000002192 145.0
CH3_k127_3539432_9 Universal stress protein family - - - 0.000000000000000000000000000000000000302 145.0
CH3_k127_3748869_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009894 524.0
CH3_k127_3748869_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K18306 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009557 492.0
CH3_k127_3748869_2 peptidase S1 and S6, chymotrypsin Hap - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002005 296.0
CH3_k127_3748869_3 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000000000000000000000000000004424 209.0
CH3_k127_3813350_0 Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control K00970 - 2.7.7.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006217 580.0
CH3_k127_3813350_1 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009152 352.0
CH3_k127_3813350_2 HAD-superfamily subfamily IB hydrolase, TIGR01490 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004491 310.0
CH3_k127_3813350_3 ABC transporter K02013 - 3.6.3.34 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004723 276.0
CH3_k127_3813350_4 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 - 2.7.6.3 0.0000000000000000000000000000000000000000000000000000000000002513 216.0
CH3_k127_3827732_0 Catalyzes cross-linking of the peptidoglycan cell wall at the division septum K03587 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004543 494.0
CH3_k127_3827732_1 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 - 2.1.1.199 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001705 435.0
CH3_k127_3827732_2 Belongs to the MraZ family K03925 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001594 255.0
CH3_k127_3827732_3 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic K03586 - - 0.0000000000000000000000000000000000605 137.0
CH3_k127_3837899_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003413 581.0
CH3_k127_3837899_1 Protein of unknown function (DUF3568) - - - 0.0000000000000000000000000001056 119.0
CH3_k127_38480_0 PFAM transposase IS116 IS110 IS902 family protein - - - 2.441e-204 646.0
CH3_k127_38480_1 HDOD domain - - - 0.000001426 51.0
CH3_k127_3858021_0 COG0028 Thiamine pyrophosphate-requiring enzymes acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase K01652 - 2.2.1.6 7.425e-306 943.0
CH3_k127_3858021_1 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 6.605e-245 766.0
CH3_k127_3858021_2 Permease YjgP YjgQ family K11720 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009532 442.0
CH3_k127_3858021_3 Permease YjgP YjgQ family K07091 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000192 429.0
CH3_k127_3858021_4 Sigma-70, region 4 K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006126 278.0
CH3_k127_3858021_5 membrane protein domain - - - 0.00000000000000000000000000000000000000000000000006569 181.0
CH3_k127_3858021_6 Protein of unknown function (DUF3106) - - - 0.0000000000000000000000000000000000005386 145.0
CH3_k127_3858021_7 DNA polymerase III K02339 - 2.7.7.7 0.00000000000000000000000000000000001451 143.0
CH3_k127_3858021_8 Glutathione S-transferase K00799 - 2.5.1.18 0.00000000000000000002364 91.0
CH3_k127_3858021_9 Protein of unknown function (DUF3619) - - - 0.0000000000000001558 85.0
CH3_k127_3880404_0 Domain of unknown function (DUF4372) - - - 2.306e-197 620.0
CH3_k127_3988324_0 PFAM FAD linked oxidase domain protein K00102,K03777 - 1.1.2.4,1.1.5.12 2.405e-226 706.0
CH3_k127_3988324_1 asparagine synthase K01953 - 6.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002695 328.0
CH3_k127_3988324_2 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K01947,K03525 - 2.7.1.33,6.3.4.15 0.000000000000000000000000000000000000000000000000000000000000000000001063 243.0
CH3_k127_3988324_3 PFAM Sporulation domain protein - - - 0.000000000000000000000000000000000000000000002597 172.0
CH3_k127_3988324_4 RelE-like toxin of type II toxin-antitoxin system HigB K07334 - - 0.000000000000000000000000000001124 123.0
CH3_k127_3988324_5 TIGRFAM addiction module antidote protein, HigA family K21498 - - 0.00000000000000000000000004068 111.0
CH3_k127_4085644_0 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000644 447.0
CH3_k127_4085644_1 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002326 371.0
CH3_k127_4085644_2 Belongs to the universal ribosomal protein uS2 family K02967 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000362 368.0
CH3_k127_4111616_0 4Fe-4S dicluster domain - - - 1.017e-303 934.0
CH3_k127_4111616_1 Nitrite and sulphite reductase 4Fe-4S domain K11181 - 1.8.99.5 3.098e-219 682.0
CH3_k127_4111616_2 Pyridine nucleotide-disulphide oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003107 426.0
CH3_k127_4111616_3 Nitrate reductase gamma subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006015 404.0
CH3_k127_4111616_4 Sulfur relay protein TusC DsrF K07236 - - 0.0000000000000000000000000000000000000000000000000000000000000000003008 230.0
CH3_k127_4111616_5 DsrC like protein K11179 - - 0.0000000000000000000000000000000000000000000000000000000000000002271 221.0
CH3_k127_4111616_6 sulfur relay protein TusD DsrE K07235 - - 0.00000000000000000000000000000000000000000000000000000000002936 207.0
CH3_k127_4111616_7 DsrH like protein K07237 - - 0.00000000000000000000000000000000000007659 145.0
CH3_k127_4111616_8 TIGRFAM sulfite reductase, dissimilatory-type alpha subunit K11180 - 1.8.99.5 0.00000000000000000000000000001443 117.0
CH3_k127_4124391_0 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009839 531.0
CH3_k127_4124391_1 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 - 2.5.1.75 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004357 428.0
CH3_k127_4124391_2 Molybdopterin oxidoreductase Fe4S4 domain K21307 - 1.8.5.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001103 341.0
CH3_k127_4124391_3 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001177 291.0
CH3_k127_4172838_0 Phosphoribulokinase / Uridine kinase family K00855 - 2.7.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001569 491.0
CH3_k127_4172838_1 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002204 437.0
CH3_k127_4172838_2 Helicase K03657 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000229 342.0
CH3_k127_4172838_3 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system K09803 - - 0.0000000000000000000000000001425 117.0
CH3_k127_4172838_4 - - - - 0.000000000000003805 79.0
CH3_k127_4172838_5 Mo-molybdopterin cofactor metabolic process K03636,K21142 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006732,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0018130,GO:0019538,GO:0019637,GO:0019720,GO:0043170,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0051189,GO:0071704,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.8.1.12 0.00000000004445 66.0
CH3_k127_4192879_0 pilus assembly protein FimV K08086 - - 1.137e-214 700.0
CH3_k127_4192879_1 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000106 513.0
CH3_k127_4192879_2 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 - 5.4.99.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001134 382.0
CH3_k127_4192879_3 Belongs to the TrpF family K01817 - 5.3.1.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000197 295.0
CH3_k127_4192879_4 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 GO:0000162,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0042802,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.2.1.20 0.000000000000000000000000000000000009951 137.0
CH3_k127_4192879_5 Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates - - - 0.000000000000000000000000000000004978 135.0
CH3_k127_4230697_0 O-antigen ligase like membrane protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003211 454.0
CH3_k127_4230697_1 Polysaccharide deacetylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005809 370.0
CH3_k127_4230697_2 RESPONSE REGULATOR receiver - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002186 280.0
CH3_k127_4230697_3 ubiE/COQ5 methyltransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001582 263.0
CH3_k127_4230697_4 Polysaccharide pyruvyl transferase - - - 0.00000000000000000000000000000000000000000000000000002584 196.0
CH3_k127_4230697_5 PFAM YcfA-like - - - 0.0000000000000000000000000000000005074 130.0
CH3_k127_4230697_6 PFAM Uncharacterised protein family UPF0150 - - - 0.00000000000000000000000000003367 119.0
CH3_k127_4230697_7 addiction module antidote protein - - - 0.0000000000000000008266 88.0
CH3_k127_4230697_8 Matrixin - - - 0.00000000000000001785 97.0
CH3_k127_4230697_9 Helix-turn-helix XRE-family like proteins K21498 - - 0.00000002817 55.0
CH3_k127_4275313_0 Receptor family ligand binding region K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004647 420.0
CH3_k127_4275313_1 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002235 303.0
CH3_k127_4275313_2 Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis K03411 - 3.5.1.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000001839 267.0
CH3_k127_4275313_3 signal transduction protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001164 265.0
CH3_k127_4378508_0 alpha-glucan phosphorylase K00688 - 2.4.1.1 0.0 1231.0
CH3_k127_4378508_1 EXOIII K13288 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003675 317.0
CH3_k127_4378508_2 Cytochrome c - - - 0.000000000000000000000000000000000007049 138.0
CH3_k127_4378508_3 helix_turn_helix, Arsenical Resistance Operon Repressor K03892 - - 0.0000000000000000000000000000001573 126.0
CH3_k127_4448208_0 Belongs to the sulfate adenylyltransferase family K00390,K00860,K00958,K13811 GO:0000096,GO:0000103,GO:0003674,GO:0003824,GO:0004020,GO:0004779,GO:0004781,GO:0006082,GO:0006520,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010134,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016779,GO:0019379,GO:0019419,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0055114,GO:0070566,GO:0071704,GO:1901564 1.8.4.10,1.8.4.8,2.7.1.25,2.7.7.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002548 455.0
CH3_k127_4448208_1 VanZ like family - - - 0.000000006327 59.0
CH3_k127_4534286_0 ATPase (AAA) - - - 1.473e-197 621.0
CH3_k127_4534286_1 Subunit R is required for both nuclease and ATPase activities, but not for modification K01153 - 3.1.21.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002582 493.0
CH3_k127_4534286_2 Domain of unknown function (DUF4143) K07133 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004816 249.0
CH3_k127_4534286_3 Domain of unknown function (DUF4143) K07133 - - 0.00000000000000000000000000001465 118.0
CH3_k127_4541723_0 Type IV pili methyl-accepting chemotaxis transducer N-term K07673 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009543 362.0
CH3_k127_4541723_1 helix_turn_helix, Lux Regulon K07684 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003274 301.0
CH3_k127_4580202_0 PilZ domain K03406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002227 523.0
CH3_k127_4580202_1 Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB NOP family K03500 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0031974,GO:0031981,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0046483,GO:0070013,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:1901360 2.1.1.176 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001601 448.0
CH3_k127_4580202_2 Domain of unknown function (DUF5062) - - - 0.00000000000000000000000000000000000000001315 153.0
CH3_k127_4580202_3 CRP FNR family K21563 - - 0.0000000000000000000000000000000001178 134.0
CH3_k127_4580202_4 Domain of unknown function (DUF4389) - - - 0.000000000000000000000000158 108.0
CH3_k127_4605255_0 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001741 431.0
CH3_k127_4605255_1 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001194 371.0
CH3_k127_4605255_2 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.000000000000000000000000000000000000000004253 157.0
CH3_k127_4605255_3 Belongs to the BolA IbaG family - - - 0.00000000000000000000000000000007288 127.0
CH3_k127_4605255_4 MlaC protein K07323 - - 0.00000000000000000000000231 103.0
CH3_k127_4605255_5 response to antibiotic K07122 - - 0.0000000000000000000561 94.0
CH3_k127_4606662_0 repeat-containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006602 606.0
CH3_k127_4606662_1 type II and III secretion system protein K02453,K12282 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004831 448.0
CH3_k127_4606662_10 carbon utilization K12280 - - 0.0000000000009374 78.0
CH3_k127_4606662_11 Prokaryotic N-terminal methylation motif K10925 - - 0.000000006318 62.0
CH3_k127_4606662_12 PFAM Fimbrial assembly family protein - - - 0.0008026 49.0
CH3_k127_4606662_2 AAA domain K12283 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007158 365.0
CH3_k127_4606662_3 PFAM Fimbrial assembly family protein K12279 - - 0.0000000000000000000000000000000000000000000000008929 187.0
CH3_k127_4606662_4 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000004904 163.0
CH3_k127_4606662_5 Tetratricopeptide repeat K12284 - - 0.0000000000000000000000000000000000000002247 166.0
CH3_k127_4606662_6 Transcriptional regulator K07726 - - 0.00000000000000000000000000000000007201 135.0
CH3_k127_4606662_7 -O-antigen - - - 0.000000000000000000000000000001106 139.0
CH3_k127_4606662_8 Cytotoxic translational repressor of toxin-antitoxin stability system - - - 0.000000000000000000000004702 102.0
CH3_k127_4606662_9 Cytotoxic translational repressor of toxin-antitoxin stability system - - - 0.0000000000002751 83.0
CH3_k127_462912_0 TIGRFAM cytochrome c oxidase, cbb3-type, subunit I K00404 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007242 591.0
CH3_k127_462912_1 cytochrome oxidase assembly K02259 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002946 392.0
CH3_k127_462912_2 CRP FNR family K01420 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001524 278.0
CH3_k127_462912_3 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002557 248.0
CH3_k127_462912_4 Involved in biogenesis of respiratory and photosynthetic systems K07152 - - 0.00000000000000000000000000000000000000000000000000000000000000000001661 237.0
CH3_k127_462912_5 Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring K01935 - 6.3.3.3 0.000000000000000000003135 95.0
CH3_k127_464827_0 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798,K15727 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007124 483.0
CH3_k127_464827_1 'signal transduction protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000176 424.0
CH3_k127_464827_2 PFAM Outer membrane efflux protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001673 362.0
CH3_k127_464827_3 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 0.000000000000000000000000000000000000000000000000000000000000009482 219.0
CH3_k127_464827_4 Copper binding periplasmic protein CusF - - - 0.00000000000000000009346 93.0
CH3_k127_4651477_0 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 2.394e-198 621.0
CH3_k127_4651477_1 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002773 330.0
CH3_k127_4651477_2 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000001373 263.0
CH3_k127_4651477_3 Belongs to the CinA family K03743 - 3.5.1.42 0.00000000000000000000000000000000000000000000000000000000001048 218.0
CH3_k127_4651477_4 Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG) K01095 - 3.1.3.27 0.00000000000000000000000000000000000000000000000000000001263 201.0
CH3_k127_4651477_5 Modulates RecA activity K03565 - - 0.000000000000000000000000000000000000000004011 160.0
CH3_k127_4651477_6 - - - - 0.000000000000000000000000000000009041 131.0
CH3_k127_4662374_0 phospho-2-dehydro-3-deoxyheptonate aldolase K03856 - 2.5.1.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006277 581.0
CH3_k127_4662374_1 chorismate mutase K01713,K14170 - 4.2.1.51,4.2.1.91,5.4.99.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006909 565.0
CH3_k127_4662374_2 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001289 547.0
CH3_k127_4662374_3 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002963 261.0
CH3_k127_4663417_0 PFAM aminotransferase class I and II K14260 - 2.6.1.2,2.6.1.66 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002541 595.0
CH3_k127_4663417_1 PAS fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002496 459.0
CH3_k127_4663417_2 Haloacid dehalogenase-like hydrolase K20881 - 3.1.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003324 327.0
CH3_k127_4663417_3 Protein of unknown function (DUF498/DUF598) - - - 0.0000000000000000000000000000000000000000004616 163.0
CH3_k127_4687984_0 type II and III secretion system protein K02453,K12282 - - 9.391e-200 640.0
CH3_k127_4687984_1 Pilus assembly protein K12279 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000139 351.0
CH3_k127_4687984_2 AAA domain K02450,K12283 - - 0.00000000000000000000000000000000000000000000000000000000000000000000002038 245.0
CH3_k127_4687984_3 Concanavalin A-like lectin/glucanases superfamily K12287 - - 0.000000000000000000000000000000000000000000000000000000000000002926 244.0
CH3_k127_4687984_4 PFAM Fimbrial assembly family protein - - - 0.000000000000000000000000000000000000000000000000000000001265 207.0
CH3_k127_4687984_5 carbon utilization K12280 - - 0.0000000000000000000000000000000000000000000000000000004281 200.0
CH3_k127_4687984_6 - K12281 - - 0.0000000000000004784 82.0
CH3_k127_4730307_0 Outer membrane protein beta-barrel family - - - 2.296e-287 898.0
CH3_k127_4730307_1 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 3.339e-256 797.0
CH3_k127_4730307_10 - - - - 0.00000000000000000000000000000000001236 139.0
CH3_k127_4730307_11 exo-alpha-(2->6)-sialidase activity - - - 0.00000000000000000000000000005618 121.0
CH3_k127_4730307_12 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.00000000000000000000001899 102.0
CH3_k127_4730307_2 Belongs to the peptidase S41A family K03797 - 3.4.21.102 4.916e-227 711.0
CH3_k127_4730307_3 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 - 2.7.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002435 503.0
CH3_k127_4730307_4 Signal transduction histidine kinase K15011 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008167 434.0
CH3_k127_4730307_5 peptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003416 390.0
CH3_k127_4730307_6 PFAM UBA THIF-type NAD FAD binding protein K21029 - 2.7.7.80 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000997 371.0
CH3_k127_4730307_7 PFAM regulatory protein TetR K05501 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001644 298.0
CH3_k127_4730307_8 COG4567 Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain K15012 - - 0.0000000000000000000000000000000000000000000000000000000000000000000007589 244.0
CH3_k127_4730307_9 Hsp20/alpha crystallin family - - - 0.00000000000000000000000000000000000000000000000000000206 194.0
CH3_k127_4736564_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 GO:0003674,GO:0003824,GO:0004812,GO:0004823,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006429,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.4 0.0 1122.0
CH3_k127_4736564_1 Gram-negative-bacterium-type cell wall biogenesis - GO:0000270,GO:0005575,GO:0005623,GO:0005886,GO:0006022,GO:0006807,GO:0008150,GO:0008152,GO:0009273,GO:0009987,GO:0016020,GO:0016021,GO:0030203,GO:0031224,GO:0042546,GO:0043164,GO:0043170,GO:0044085,GO:0044425,GO:0044464,GO:0071554,GO:0071704,GO:0071840,GO:0071944,GO:1901135,GO:1901564 - 0.00000000003777 68.0
CH3_k127_4765861_0 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen K00990 - 2.7.7.59 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001183 390.0
CH3_k127_4765861_1 Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end K02407 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003841 307.0
CH3_k127_4765861_2 Flagellar hook-length control protein FliK - - - 0.00000000000000000000000000000000000000000000000000000000000000000009528 247.0
CH3_k127_4765861_3 Flagellar protein fliS K02422 - - 0.0000000000000000000000000000000000000001333 155.0
CH3_k127_4765861_4 homolog of the cytoplasmic domain of flagellar protein FhlB K04061 - - 0.000000000000000000000000000000000004748 138.0
CH3_k127_4765861_5 Protein of unknown function (DUF2802) - - - 0.00000000000000000000005749 102.0
CH3_k127_4765861_6 Flagellar protein FliT K02423 - - 0.000000000001544 71.0
CH3_k127_4782121_0 Glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004838 422.0
CH3_k127_4782121_1 Tetratricopeptide repeat K12284 - - 0.000000000000000000000000000000000000000000000000000000000000000000004891 249.0
CH3_k127_4782121_2 AAA domain K02450,K12283 - - 0.0000000000000000000000000000000000000000000000000000000000000000002734 232.0
CH3_k127_4782121_3 Bacterial SH3 domain - - - 0.0000000000000000000000000000000000000002474 156.0
CH3_k127_4782121_4 One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA K03071 - - 0.00000001333 56.0
CH3_k127_4847640_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 - - 1.25e-237 745.0
CH3_k127_4847640_1 Heavy metal translocating P-type atpase K01533 - 3.6.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001734 389.0
CH3_k127_4847640_2 Cytochrome oxidase maturation protein cbb3-type - - - 0.0000000000000000000271 91.0
CH3_k127_4909598_0 PFAM RIO-like kinase K07178 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006624 422.0
CH3_k127_4909598_1 membrane transporter protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002279 366.0
CH3_k127_4909598_2 EVE domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000405 277.0
CH3_k127_4909598_3 Protein of unknown function (DUF3530) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005481 280.0
CH3_k127_4909598_4 Belongs to the 5-formyltetrahydrofolate cyclo-ligase family K01934 - 6.3.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000001884 251.0
CH3_k127_5013312_0 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05540 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003978 562.0
CH3_k127_5013312_1 bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000283 477.0
CH3_k127_5013312_2 Belongs to the transcriptional regulatory Fis family K03557 - - 0.00000000000000000000000000000008519 126.0
CH3_k127_5013312_3 - - - - 0.00001775 57.0
CH3_k127_5047362_0 twitching motility protein K02669,K12203 - - 1.646e-198 621.0
CH3_k127_5047362_1 Dynamin family - - - 6.522e-195 627.0
CH3_k127_5047362_2 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001304 315.0
CH3_k127_5047362_3 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002598 310.0
CH3_k127_5047362_4 integral membrane protein K02221 - - 0.000000000000000000000000000000000000000000000000000000000000001935 222.0
CH3_k127_5047362_5 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 0.00000000000000000000000000000000000000000000000000000000000003043 218.0
CH3_k127_5047362_6 Belongs to the UPF0235 family K09131 - - 0.00000000000000000000000008463 111.0
CH3_k127_5054236_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 5.262e-262 809.0
CH3_k127_5054236_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 - 1.6.5.3 1.908e-247 767.0
CH3_k127_5054236_2 Molybdopterin oxidoreductase Fe4S4 domain K00336 - 1.6.5.3 2.659e-227 710.0
CH3_k127_5054236_3 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002202 568.0
CH3_k127_5054236_4 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000168 399.0
CH3_k127_5054236_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000107 318.0
CH3_k127_5054236_6 Specifically methylates the ribose of guanosine 2251 in 23S rRNA K03218 - 2.1.1.185 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001603 304.0
CH3_k127_5054236_7 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003402 272.0
CH3_k127_5054236_8 PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit K00334 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000003973 251.0
CH3_k127_5054236_9 Preprotein translocase SecG subunit K03075 - - 0.000000000000000000000000000000000000000000738 160.0
CH3_k127_5059436_0 Radical SAM superfamily K06941 - 2.1.1.192 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006641 540.0
CH3_k127_5059436_1 DNA polymerase III, epsilon subunit K02342 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001659 345.0
CH3_k127_5059436_2 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001594 261.0
CH3_k127_5059436_3 Mycobacterial 4 TMS phage holin, superfamily IV K08972 - - 0.0000000000000000000000000000000000001971 144.0
CH3_k127_5078610_0 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 1.649e-317 979.0
CH3_k127_5078610_1 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002437 580.0
CH3_k127_5078610_10 tol-pal system-associated acyl-CoA thioesterase K07107 - - 0.00000000000000000000000000000000000000000000000000005293 190.0
CH3_k127_5078610_11 Pfam Biopolymer transport protein ExbD TolR K03560 - - 0.00000000000000000000000000000000000216 141.0
CH3_k127_5078610_12 Putative regulatory protein - - - 0.00000000000000000000000000000000000309 138.0
CH3_k127_5078610_2 phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol K06131 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002265 479.0
CH3_k127_5078610_3 transcriptional regulatory protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005816 407.0
CH3_k127_5078610_4 PFAM Endonuclease exonuclease phosphatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002053 392.0
CH3_k127_5078610_5 PFAM MotA TolQ ExbB proton channel K03562 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001247 318.0
CH3_k127_5078610_6 membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001564 314.0
CH3_k127_5078610_7 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 - 3.1.22.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000003277 261.0
CH3_k127_5078610_8 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000006695 265.0
CH3_k127_5078610_9 Nudix hydrolase K08310 - 3.6.1.67 0.0000000000000000000000000000000000000000000000000000000000001233 215.0
CH3_k127_511588_0 Belongs to the dGTPase family. Type 2 subfamily K01129 - 3.1.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008756 587.0
CH3_k127_511588_1 type II and III secretion system protein K02666 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005403 587.0
CH3_k127_511588_2 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735,K13829 - 2.7.1.71,4.2.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001372 553.0
CH3_k127_511588_3 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 - 2.7.1.71 0.000000000000000000000000000000000000000000000000000000000000000000000000008784 254.0
CH3_k127_511588_4 Conserved region in glutamate synthase K00265 - 1.4.1.13,1.4.1.14 0.00000000000000000000000000000000000000000000000000006504 188.0
CH3_k127_5118025_0 Flavin-binding monooxygenase-like - - - 2.369e-313 962.0
CH3_k127_5118025_1 Metal-dependent hydrolase K07044 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005182 546.0
CH3_k127_5118025_2 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006054 529.0
CH3_k127_5118025_3 Alpha/beta hydrolase family - - - 0.000000000000000000000000000000000000000000000000000004581 191.0
CH3_k127_5124759_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 4.304e-222 690.0
CH3_k127_5124759_1 Belongs to the ompA family K03286 - - 0.0000000000000000000000000000000000008314 143.0
CH3_k127_5129808_0 Domain of unknown function (DUF3391) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008098 520.0
CH3_k127_5129808_1 Ankyrin repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004268 259.0
CH3_k127_5129808_2 - - - - 0.00000000000000000000000002785 120.0
CH3_k127_5129808_3 - - - - 0.000000000000000000000001511 109.0
CH3_k127_5129808_4 amidohydrolase - - - 0.00000000000003972 74.0
CH3_k127_517158_0 Belongs to the ClpA ClpB family K03694 - - 0.0 1264.0
CH3_k127_517158_1 pyridine nucleotide-disulphide oxidoreductase K17218 GO:0003674,GO:0003824,GO:0003955,GO:0005488,GO:0005515,GO:0006091,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016491,GO:0016651,GO:0016655,GO:0019646,GO:0022900,GO:0022904,GO:0042802,GO:0044237,GO:0045333,GO:0055114 1.8.5.4 4.006e-242 755.0
CH3_k127_517158_10 Belongs to the Nudix hydrolase family. NudJ subfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000001865 231.0
CH3_k127_517158_11 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.0000000000000000000000000000000000000000000000000000000000000000006712 232.0
CH3_k127_517158_12 - - - - 0.00000000000000000000000000000000000000000000000000000000009171 209.0
CH3_k127_517158_13 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation K06891 - - 0.00000000000000000000000000000000000000000005339 162.0
CH3_k127_517158_14 - - - - 0.000000000000004942 77.0
CH3_k127_517158_15 ABC transporter, phosphonate, periplasmic substrate-binding protein K13924 - 2.1.1.80,3.1.1.61 0.00005385 54.0
CH3_k127_517158_2 Isocitrate dehydrogenase K00031 GO:0003674,GO:0003824,GO:0003862,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006551,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009098,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.42 1.816e-239 746.0
CH3_k127_517158_3 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000184 399.0
CH3_k127_517158_4 Rhodanese Homology Domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001847 371.0
CH3_k127_517158_5 Rhodanese Homology Domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000973 349.0
CH3_k127_517158_6 diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008482 357.0
CH3_k127_517158_7 Belongs to the pseudouridine synthase RsuA family K06181 - 5.4.99.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008079 318.0
CH3_k127_517158_8 Belongs to the peptidase S24 family K01356 - 3.4.21.88 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002454 297.0
CH3_k127_517158_9 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA K01520 - 3.6.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000007739 247.0
CH3_k127_5190966_0 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008315 439.0
CH3_k127_5190966_1 ABC-type transport system involved in lysophospholipase L1 biosynthesis permease component K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001376 424.0
CH3_k127_5190966_2 Transcriptional regulator K02483 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001964 334.0
CH3_k127_5190966_3 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000184 304.0
CH3_k127_5190966_4 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003871 255.0
CH3_k127_5190966_5 PFAM lipolytic protein G-D-S-L family K10804 - 3.1.1.5 0.0000000000000000000000000000000000000000000000000000000000000000142 234.0
CH3_k127_5192358_0 diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003327 425.0
CH3_k127_5192358_1 LemA Family K03744 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004016 332.0
CH3_k127_5192358_10 - - - - 0.00000007001 59.0
CH3_k127_5192358_2 TIGRFAM Phage SPO1 DNA polymerase-related protein K21929 - 3.2.2.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001651 307.0
CH3_k127_5192358_3 COG1512 Beta-propeller domains of methanol dehydrogenase type K06872 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001439 297.0
CH3_k127_5192358_4 Peptidase M22 glycoprotease K14742 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003444 287.0
CH3_k127_5192358_5 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001384 248.0
CH3_k127_5192358_6 membrane - - - 0.00000000000000000000000000000000000000000000000000000000001189 212.0
CH3_k127_5192358_7 This enzyme acetylates the N-terminal alanine of ribosomal protein S18 K03789,K14742 - 2.3.1.128 0.000000000000000000000000000000000000000000000000000000003125 202.0
CH3_k127_5192358_8 HIRAN - - - 0.0000000000000000000000000000000005809 132.0
CH3_k127_5192358_9 PIN domain - - - 0.0000000000000000000007033 103.0
CH3_k127_5201112_0 General secretory system II protein E domain protein K02454,K02652,K12276 - - 0.0 1064.0
CH3_k127_5201112_1 SMART beta-lactamase domain protein K01120 - 3.1.4.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008563 316.0
CH3_k127_5201112_2 Nucleotidyl transferase AbiEii toxin, Type IV TA system - - - 0.000000000000000000001124 104.0
CH3_k127_5201112_3 Belongs to the ATCase OTCase family K00609 - 2.1.3.2 0.0000006007 57.0
CH3_k127_5204035_0 PFAM transposase, IS4 family protein K07481 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003847 411.0
CH3_k127_5204035_1 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 0.00000000000004106 78.0
CH3_k127_5220226_0 Phosphoribosylformylglycinamidine cyclo-ligase K01933 - 6.3.3.1 1.389e-197 619.0
CH3_k127_5220226_1 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002035 290.0
CH3_k127_5220226_2 Protein of unknown function (DUF3108) - - - 0.000000000000000000000000000000000000000000000000000000000000000000007454 246.0
CH3_k127_5220226_3 Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB NOP family K03500 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0031974,GO:0031981,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0046483,GO:0070013,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:1901360 2.1.1.176 0.000000000000000000000000000000000002339 141.0
CH3_k127_5220226_4 permease - - - 0.00000000000007684 73.0
CH3_k127_524985_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01539 - 3.6.3.9 0.0 1205.0
CH3_k127_524985_1 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 4.002e-266 824.0
CH3_k127_524985_10 Belongs to the P(II) protein family K04751 - - 0.00000000000000000000000000000000000000000000000000000001052 202.0
CH3_k127_524985_11 - - - - 0.0000000000000000000000000000000000000000000000000000001149 198.0
CH3_k127_524985_12 Plasmid stabilization system - - - 0.000000000000000000000000000000000000000000006972 165.0
CH3_k127_524985_13 .,Oxidizes proline to glutamate for use as a carbon and nitrogen source - - - 0.000000000000000000000000000000002791 132.0
CH3_k127_524985_14 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.0000000000000000000000001146 109.0
CH3_k127_524985_15 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.00000000000000000000005151 98.0
CH3_k127_524985_16 cell redox homeostasis K03671,K03672 - 1.8.1.8 0.00000000000002243 78.0
CH3_k127_524985_2 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01916,K01950 - 6.3.1.5,6.3.5.1 1.751e-211 670.0
CH3_k127_524985_3 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 3.511e-208 658.0
CH3_k127_524985_4 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 - 1.1.1.85 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001014 602.0
CH3_k127_524985_5 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903,K14067 - 6.2.1.5,6.2.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001649 575.0
CH3_k127_524985_6 Major facilitator Superfamily K05820 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003384 559.0
CH3_k127_524985_7 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005988 504.0
CH3_k127_524985_8 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006835 385.0
CH3_k127_524985_9 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001557 353.0
CH3_k127_5345492_0 heat shock protein DnaJ K05801 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009163 444.0
CH3_k127_5345492_1 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005417 345.0
CH3_k127_5345492_2 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.00000000000000000000000000000000000000000000000000000000000000000000000001082 256.0
CH3_k127_5349161_0 DDE superfamily endonuclease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009094 311.0
CH3_k127_5349161_1 transposition - - - 0.000000000001563 70.0
CH3_k127_5349161_2 - - - - 0.00000005365 56.0
CH3_k127_5461930_0 DegT/DnrJ/EryC1/StrS aminotransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008112 450.0
CH3_k127_5461930_1 Creatinine amidohydrolase K01470,K22232 - 3.5.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002588 426.0
CH3_k127_5461930_2 PFAM transposase IS116 IS110 IS902 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005135 323.0
CH3_k127_5469271_0 Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis K03688 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006451 526.0
CH3_k127_5469271_1 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) K03183 - 2.1.1.163,2.1.1.201 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002938 422.0
CH3_k127_5469271_2 Transcriptional regulatory protein, C terminal K07657 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005353 338.0
CH3_k127_5469271_3 protein conserved in bacteria K03690 - - 0.000000000000000000000000001607 119.0
CH3_k127_547598_0 Belongs to the UPF0312 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000559 304.0
CH3_k127_547598_1 Cytochrome b561 K12262 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001925 286.0
CH3_k127_547598_2 Belongs to the UPF0312 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001292 267.0
CH3_k127_547598_3 Phage derived protein Gp49-like (DUF891) - - - 0.0000000000000000000000000000000000000000000000000000000000000000805 223.0
CH3_k127_547598_4 PFAM regulatory protein, MarR - - - 0.0000000000000000000000000000000000000000000000000000000000000222 217.0
CH3_k127_547598_5 Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen-IX K00228 GO:0003674,GO:0005488,GO:0005515,GO:0042802,GO:0042803,GO:0046983 1.3.3.3 0.0000000000000000000000000000000000002425 142.0
CH3_k127_547598_6 Helix-turn-helix domain - - - 0.000000000000000000000000000000000005076 139.0
CH3_k127_547598_7 Protein of unknown function (DUF2283) - - - 0.0000000006814 60.0
CH3_k127_547598_8 Domain of unknown function (DUF4258) - - - 0.0000001623 53.0
CH3_k127_5478318_0 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 - 6.1.1.20 5.108e-281 876.0
CH3_k127_5478318_1 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 - 6.1.1.20 0.000000000000000000000000000000000000000000000000000000000006027 207.0
CH3_k127_5483344_0 Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme K02302,K02303 - 1.3.1.76,2.1.1.107,4.99.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001409 573.0
CH3_k127_5484973_0 Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps K04084 - 1.8.1.8 6.819e-257 814.0
CH3_k127_5484973_1 Hypothetical glycosyl hydrolase family 13 K11931 - - 1.383e-212 678.0
CH3_k127_5484973_2 acetyl-CoA carboxylase biotin carboxylase K01961 GO:0003674,GO:0003824,GO:0004075,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010565,GO:0016053,GO:0016874,GO:0016879,GO:0019216,GO:0019217,GO:0019222,GO:0019752,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032787,GO:0042304,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045717,GO:0045833,GO:0045922,GO:0046394,GO:0046890,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051055,GO:0062012,GO:0062014,GO:0065007,GO:0071704,GO:0072330,GO:0080090,GO:1901576 6.3.4.14,6.4.1.2 1.16e-209 654.0
CH3_k127_5484973_3 Glycosyl transferase family 21 K11936 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002448 479.0
CH3_k127_5484973_4 Poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA K11935 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007185 321.0
CH3_k127_5484973_5 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.0000000000000000000000000000000000000000000000000000000000001534 214.0
CH3_k127_5484973_6 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.0000000000000000000000000000000000000000000000000000000000002904 215.0
CH3_k127_5484973_7 Biotin-requiring enzyme K02160 - - 0.0000000000000000000000000000000000000000000000000000002283 201.0
CH3_k127_5484973_8 Divalent ion tolerance protein K03926 GO:0003674,GO:0005488,GO:0005507,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0043167,GO:0043169,GO:0044424,GO:0044464,GO:0046872,GO:0046914 - 0.00000000000000000000000000000000000000000008633 161.0
CH3_k127_5484973_9 FxsA cytoplasmic membrane protein K07113 - - 0.00000000000000000000000007932 111.0
CH3_k127_5497353_0 PFAM PHP C-terminal K07053 GO:0003674,GO:0003824,GO:0005488,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0030145,GO:0042578,GO:0043167,GO:0043169,GO:0044237,GO:0046872,GO:0046914,GO:0097657 3.1.3.97 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000276 372.0
CH3_k127_5497353_1 Belongs to the SUA5 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002832 341.0
CH3_k127_5497353_2 probably involved in intracellular septation K06190 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006858 311.0
CH3_k127_5497353_3 peptidylprolyl isomerase K03769 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004272 287.0
CH3_k127_5497353_4 Peptidase M50 - - - 0.0000000000000000000000000000000000000000000000000000000007239 203.0
CH3_k127_5497353_5 YCII-related domain K09780 - - 0.0000000000000000000000000000000000000000001011 162.0
CH3_k127_5497353_6 BolA-like protein K05527 - - 0.000000000000000000000000000000009291 128.0
CH3_k127_5505456_0 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle K01595 - 4.1.1.31 0.0 1560.0
CH3_k127_5505456_1 Phosphate-starvation-inducible E K13256 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002308 241.0
CH3_k127_5505456_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000002779 228.0
CH3_k127_5505456_3 Belongs to the SAICAR synthetase family K01923 GO:0003674,GO:0003824,GO:0004639,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.2.6 0.000000000000000000000000000000000000000000000000000003589 196.0
CH3_k127_5544852_0 - - - - 0.0000000000000000001147 90.0
CH3_k127_5544852_1 Peptidase S24-like - - - 0.00000000000000009679 86.0
CH3_k127_5544852_3 Helix-turn-helix domain - - - 0.0000001509 57.0
CH3_k127_5556855_0 Cytochrome c-type biogenesis protein CcmF K02198 - - 1.615e-294 916.0
CH3_k127_5556855_1 Periplasmic protein thiol K02199 - - 0.00000000000000000000000000000000000000000000000000000000004934 207.0
CH3_k127_5573576_0 Threonine synthase K01733 - 4.2.3.1 2.361e-267 828.0
CH3_k127_5573576_1 PFAM sigma-54 factor interaction domain-containing protein K06714 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002704 479.0
CH3_k127_5573576_2 Belongs to the NadC ModD family K00767 - 2.4.2.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000688 387.0
CH3_k127_5573576_3 Membrane transport protein K07088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001448 354.0
CH3_k127_5573576_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002781 299.0
CH3_k127_5573576_5 periplasmic secreted protein - - - 0.000000000000000000000000001946 121.0
CH3_k127_5573576_6 Belongs to the NadC ModD family K00767 - 2.4.2.19 0.0000000000003062 70.0
CH3_k127_5573576_7 Serine Threonine protein kinase - - - 0.0000000000009492 79.0
CH3_k127_5573576_8 homoserine dehydrogenase K00003 - 1.1.1.3 0.000000000001876 67.0
CH3_k127_5580983_0 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 - 1.9.3.1 1.401e-312 961.0
CH3_k127_5580983_1 glutamine synthetase K01915,K20712 GO:0003674,GO:0003824,GO:0006725,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0016866,GO:0034022,GO:0042537,GO:0044237,GO:0050486,GO:0071704,GO:1901360 5.4.4.3,6.3.1.2 2.272e-303 930.0
CH3_k127_5580983_10 Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA K03439 - 2.1.1.33 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002983 358.0
CH3_k127_5580983_11 Predicted periplasmic lipoprotein (DUF2279) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001294 328.0
CH3_k127_5580983_12 SURF1-like protein K14998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000043 248.0
CH3_k127_5580983_13 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 GO:0000003,GO:0003006,GO:0003674,GO:0003824,GO:0004764,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0007275,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009790,GO:0009791,GO:0009793,GO:0009987,GO:0010154,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019632,GO:0019752,GO:0022414,GO:0032501,GO:0032502,GO:0032787,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046394,GO:0046417,GO:0048316,GO:0048608,GO:0048731,GO:0048856,GO:0055114,GO:0061458,GO:0071704,GO:1901576,GO:1901615 1.1.1.25 0.000000000000000000000000000000000000000000000000000000000000000007414 226.0
CH3_k127_5580983_14 - - - - 0.00000000000000000000000000000000000000000000000000000000004375 210.0
CH3_k127_5580983_15 Rhodanese Homology Domain - - - 0.000000000000000000000000000000000000000000000000000000003922 203.0
CH3_k127_5580983_16 PemK-like, MazF-like toxin of type II toxin-antitoxin system K07171 - - 0.000000000000000000000000000000000000000000000000000001567 192.0
CH3_k127_5580983_17 Cytochrome c oxidase assembly protein CtaG/Cox11 K02258 - - 0.0000000000000000000000000000000000000000000000000001565 192.0
CH3_k127_5580983_18 Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S K03149 - 2.8.1.10 0.00000000000000000000000000000000000000000001161 162.0
CH3_k127_5580983_19 signal sequence binding - - - 0.0000000000000000000000000000000000000000001883 166.0
CH3_k127_5580983_2 response regulator K07712 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0043565,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:2000112,GO:2000113,GO:2001141 - 7.114e-236 736.0
CH3_k127_5580983_20 - - - - 0.00000000000000000000000000000000000000001669 158.0
CH3_k127_5580983_21 PFAM PsiF repeat protein - - - 0.00000000000000000000000000000000006703 138.0
CH3_k127_5580983_22 Protein of unknown function (DUF3018) - - - 0.0000000000000000000000000000000004624 134.0
CH3_k127_5580983_23 Integral membrane protein (DUF2244) - - - 0.00000000000000000000000000001201 124.0
CH3_k127_5580983_3 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001625 595.0
CH3_k127_5580983_4 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001645 514.0
CH3_k127_5580983_5 Cytochrome c oxidase subunit III K02276 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000369 475.0
CH3_k127_5580983_6 PFAM ATP-binding region ATPase domain protein K07708 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009208 459.0
CH3_k127_5580983_7 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001025 436.0
CH3_k127_5580983_8 Exodeoxyribonuclease III K01142 - 3.1.11.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006426 415.0
CH3_k127_5580983_9 GTP cyclohydrolase K01495 - 3.5.4.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001777 379.0
CH3_k127_5600833_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003126 541.0
CH3_k127_5600833_1 peptidylprolyl isomerase K03770 - 5.2.1.8 0.0000000000000000000000000000000000000000000005356 171.0
CH3_k127_5600833_2 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.0000000000000000000000000000000000000000204 153.0
CH3_k127_5600833_4 - - - - 0.0000003269 53.0
CH3_k127_5609137_0 Belongs to the anaerobic coproporphyrinogen-III oxidase family - GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006782,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016491,GO:0016627,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0046501,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0051989,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 - 1.833e-231 724.0
CH3_k127_5609137_1 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003106 444.0
CH3_k127_5609137_2 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K05807 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003839 370.0
CH3_k127_5609137_3 alpha/beta hydrolase fold K07019 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004294 252.0
CH3_k127_5609137_4 Binds to the C-terminal region of flagellin, which is implicated in polymerization, and participates in the assembly of the flagellum K13626 - - 0.00000000000000000000000000000000001108 141.0
CH3_k127_5609137_5 Belongs to the multicopper oxidase YfiH RL5 family K05810 - - 0.000000000000000000000000001509 115.0
CH3_k127_5616324_0 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III K15778 - 5.4.2.2,5.4.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002532 495.0
CH3_k127_5616324_1 Flagellar Assembly Protein A K09749 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009782 390.0
CH3_k127_5616324_2 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001116 350.0
CH3_k127_5616324_3 Protein of unknown function (DUF938) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005348 318.0
CH3_k127_5616324_4 Tfp pilus assembly protein FimV - - - 0.0000000000000000000000000000000000000000000000004242 197.0
CH3_k127_5616324_5 Peptidase S24-like - - - 0.00000000000000000001615 91.0
CH3_k127_5640817_0 Aminotransferase class I and II K14155 - 4.4.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002034 580.0
CH3_k127_5640817_1 PFAM YaeQ family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000008323 256.0
CH3_k127_5640817_2 Integral membrane protein CcmA involved in cell shape determination - - - 0.00000000000000000000000000000000000000000000000000000003199 202.0
CH3_k127_5640817_3 Invasion gene expression up-regulator, SirB - - - 0.000000000000000000000000000000000000005588 148.0
CH3_k127_5671816_0 Putative diguanylate phosphodiesterase K21023 - 2.7.7.65 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000111 514.0
CH3_k127_5671816_1 Diguanylate cyclase - - - 0.0000000000007001 81.0
CH3_k127_5692365_0 ATP synthase F1, epsilon subunit - - - 1.188e-270 840.0
CH3_k127_5692365_1 glutamate--cysteine ligase K01919 - 6.3.2.2 2.007e-226 706.0
CH3_k127_5692365_2 Belongs to the prokaryotic GSH synthase family K01920 - 6.3.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000293 370.0
CH3_k127_5706493_0 Collagenase K08303 - - 2.392e-308 956.0
CH3_k127_5706493_1 conserved protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003517 331.0
CH3_k127_5706493_2 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02621 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002434 268.0
CH3_k127_5706493_3 Ami_2 - - - 0.00000000000000000000000000000000000000000000000000000000000001364 228.0
CH3_k127_5706493_4 Transcriptional regulator - - - 0.0000000000000000000000000000005738 123.0
CH3_k127_5752864_0 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000001007 200.0
CH3_k127_5752864_1 Domain of unknown function (DUF1972) - - - 0.000000000000000000000000000000000000000000000000001627 186.0
CH3_k127_5752864_2 alpha-L-arabinofuranosidase K01209 - 3.2.1.55 0.000000000000000000000000000000000000000000622 175.0
CH3_k127_5752864_3 Methionine biosynthesis protein MetW - - - 0.0000000000000000000000000000005579 134.0
CH3_k127_5752864_4 Methylase involved in ubiquinone menaquinone biosynthesis - - - 0.0000000000000000000000000002256 126.0
CH3_k127_5752864_5 heptosyltransferase K02843 - - 0.0000000000000000000000001328 119.0
CH3_k127_5752864_6 Polysaccharide biosynthesis protein - - - 0.0002642 54.0
CH3_k127_5771203_0 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0016787,GO:0019538,GO:0019904,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0097718,GO:0140096,GO:1901564 3.4.11.1 3.332e-256 797.0
CH3_k127_5771203_1 Permease, YjgP YjgQ family K07091 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007151 452.0
CH3_k127_5771203_2 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003756 293.0
CH3_k127_5771203_3 Permease, YjgP YjgQ family K11720 - - 0.0000000000000000000000000000000000000000000000000000000000000005053 224.0
CH3_k127_5771203_4 dna polymerase III (Chi subunit) K02339 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000432 208.0
CH3_k127_5778960_0 Terminase-like family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005805 475.0
CH3_k127_5778960_1 Peptidase M15 - - - 0.00000000000000000000000000000000058 136.0
CH3_k127_5778960_2 - - - - 0.0000000000000000000008431 102.0
CH3_k127_5778960_3 HNH endonuclease - - - 0.00000000000000001889 88.0
CH3_k127_5778960_4 - - - - 0.000000000007456 74.0
CH3_k127_5778960_6 - - - - 0.0001124 46.0
CH3_k127_5846029_0 Mur ligase family, catalytic domain K01924 - 6.3.2.8 6.767e-245 763.0
CH3_k127_5846029_1 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain K00075 - 1.3.1.98 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000636 390.0
CH3_k127_5846029_2 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.0000000000000000000000000000000000000000000000000000000004226 204.0
CH3_k127_5921575_0 PD-(D/E)XK nuclease superfamily K16899 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003792 524.0
CH3_k127_5921575_1 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000115 381.0
CH3_k127_5921575_2 Belongs to the thioredoxin family K03671 - - 0.000000000000000000000000000000000000000000000000000000000000000388 220.0
CH3_k127_5921575_3 Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions K05524 - - 0.000000000000000000000000000000000000000000000000000000005197 199.0
CH3_k127_5921575_4 - - - - 0.000000000000009555 78.0
CH3_k127_5944361_0 Phosphatidylethanolamine-binding protein K06910 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001222 263.0
CH3_k127_5944361_1 Hsp20/alpha crystallin family K13993 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001448 244.0
CH3_k127_5944361_2 acetyltransferase K03830 - - 0.00000000000000000000000000000000000000000000000000000003836 204.0
CH3_k127_6016241_0 Belongs to the Nudix hydrolase family K03574 - 3.6.1.55 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003354 399.0
CH3_k127_6016241_1 Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity K18778 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004337 346.0
CH3_k127_6016241_2 ATPase (AAA K06923 - - 0.0000000000000000000000000000000000000000000000000000000000000000004635 231.0
CH3_k127_6016241_3 - - - - 0.00000000000000000000000008615 111.0
CH3_k127_6016241_4 Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase K09862 - - 0.000000000000000000509 88.0
CH3_k127_6047501_0 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 1.047e-321 992.0
CH3_k127_6047501_1 Converts GTP to 7,8-dihydroneopterin triphosphate K09007 - 3.5.4.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000005705 256.0
CH3_k127_6047501_2 Belongs to the FPP GGPP synthase family K00795 - 2.5.1.1,2.5.1.10 0.000000000000000000000000000000000000000000000000000000000000000000004938 237.0
CH3_k127_6047517_0 PFAM Peptidase M18, aminopeptidase I K01267 - 3.4.11.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001471 477.0
CH3_k127_6047517_1 Cytochrome c - - - 0.00000000000000000000000000000000000000000000000000000000000000000000009883 248.0
CH3_k127_6047517_2 Protein of unknown function (DUF971) - - - 0.000000000000000000000000000000000000000000000000000001365 198.0
CH3_k127_6047517_3 Fructosamine kinase - - - 0.00000000000000000000007207 102.0
CH3_k127_6085694_0 Histidine kinase - - - 1.317e-291 910.0
CH3_k127_6085694_1 response regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009943 543.0
CH3_k127_6085694_2 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA K03500 - 2.1.1.176 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002037 529.0
CH3_k127_6085694_3 Belongs to the peptidase M48B family K03799 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001245 439.0
CH3_k127_6085694_4 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000196 152.0
CH3_k127_6085694_5 Domain of unknown function (DUF4390) - - - 0.00000000000000000000000000000000000001782 151.0
CH3_k127_6085694_6 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 - 2.1.2.9 0.0000000000000000000000000000001634 127.0
CH3_k127_6085694_7 Transport of potassium into the cell K03549 - - 0.00000000000335 67.0
CH3_k127_6100546_0 Belongs to the glucose-6-phosphate 1-epimerase family K01792 - 5.1.3.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000002719 266.0
CH3_k127_6100546_1 Gram-negative bacterial TonB protein C-terminal K03832 - - 0.0000000000000000000000000000000000000003047 158.0
CH3_k127_6100546_2 Nadh flavin oxidoreductase nadh oxidase K10680 GO:0000003,GO:0000302,GO:0001101,GO:0003006,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005777,GO:0006082,GO:0006950,GO:0006979,GO:0007275,GO:0008150,GO:0008152,GO:0009058,GO:0009605,GO:0009607,GO:0009620,GO:0009694,GO:0009695,GO:0009791,GO:0009908,GO:0009987,GO:0010035,GO:0010193,GO:0010817,GO:0016053,GO:0016491,GO:0016627,GO:0016628,GO:0016629,GO:0019752,GO:0022414,GO:0032501,GO:0032502,GO:0032787,GO:0042221,GO:0042445,GO:0042446,GO:0042493,GO:0042579,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046677,GO:0048367,GO:0048437,GO:0048438,GO:0048443,GO:0048466,GO:0048608,GO:0048731,GO:0048827,GO:0048856,GO:0050896,GO:0051704,GO:0051707,GO:0055114,GO:0061458,GO:0065007,GO:0065008,GO:0071704,GO:0072330,GO:0090567,GO:0099402,GO:1901576,GO:1901700 - 0.000000000000000000000000003612 111.0
CH3_k127_6100546_3 - - - - 0.000000000000000008197 85.0
CH3_k127_6100724_0 Specifically methylates the ribose of guanosine 2251 in 23S rRNA K03218 - 2.1.1.185 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000382 309.0
CH3_k127_6100724_1 Flavocytochrome c sulphide dehydrogenase, flavin-binding K17229 - 1.8.2.3 0.00000000000000000000000000000000000000000000000000000009674 200.0
CH3_k127_6100724_2 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000000000000000000000000002857 124.0
CH3_k127_612567_0 Receptor family ligand binding region K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001448 531.0
CH3_k127_612567_1 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002388 503.0
CH3_k127_612567_2 Response regulator receiver - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000138 469.0
CH3_k127_612567_3 Branched-chain amino acid transport system / permease component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008762 443.0
CH3_k127_612567_4 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002204 346.0
CH3_k127_612567_5 ABC transporter K01996 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000206 321.0
CH3_k127_612567_6 PFAM cytochrome c, class I K08738 - - 0.0000000000000000000000000000000000002358 143.0
CH3_k127_612567_7 Histidine kinase - - - 0.00000000000271 74.0
CH3_k127_6148621_0 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 - 2.5.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001553 438.0
CH3_k127_6148621_1 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008837,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016053,GO:0016853,GO:0016854,GO:0016855,GO:0019752,GO:0036361,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0047661,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.1.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002213 435.0
CH3_k127_6148621_2 Lipid A Biosynthesis K02517,K12974 - 2.3.1.241,2.3.1.242 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001533 408.0
CH3_k127_6148621_3 Lipid A Biosynthesis K02517,K12974 - 2.3.1.241,2.3.1.242 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001221 366.0
CH3_k127_6148621_4 coa-binding K06929 - - 0.0000000000000000000000000000000000000000000000000000000000000181 216.0
CH3_k127_6148621_5 Protein of unknown function, DUF484 K09921 - - 0.0000000815 54.0
CH3_k127_6309014_0 prepilin-type N-terminal cleavage methylation K12285 - - 0.0000000000000000000000000000000000000000000000000000000000000005508 231.0
CH3_k127_6309014_1 Prokaryotic N-terminal methylation motif K10924 - - 0.000000000000000000000000000000000001796 141.0
CH3_k127_6309014_2 type IV pilus modification protein PilV K10927 - - 0.0000000000000000000000000000000001954 138.0
CH3_k127_6309014_3 Prokaryotic N-terminal methylation motif K10924 - - 0.000000000000000000000000000002621 126.0
CH3_k127_6309014_4 Pilus assembly protein PilX K12286 - - 0.000000000000000000000000000007015 124.0
CH3_k127_6309014_5 Tfp pilus assembly protein FimT K10926 - - 0.0000000000000000000000000005645 118.0
CH3_k127_6342848_0 NADH-quinone oxidoreductase K00336 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001022 385.0
CH3_k127_6342848_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006574 295.0
CH3_k127_6397467_0 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616,K13810 - 2.2.1.2,5.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000352 428.0
CH3_k127_6397467_1 Multicopper oxidase - - - 0.000000000000000000000000001725 124.0
CH3_k127_6397467_2 Multicopper oxidase - - - 0.0000000000002995 73.0
CH3_k127_642576_0 PFAM Response regulator receiver domain K11624 - - 0.0000000000000000000000000000000000000000000000000000000000139 214.0
CH3_k127_642576_1 N-terminal 7TM region of histidine kinase K07673 - 2.7.13.3 0.00000000000000000000000000000000000002531 157.0
CH3_k127_646055_0 Belongs to the peptidase M17 family K01255 - 3.4.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006785 605.0
CH3_k127_646055_1 Glycosyltransferase family 9 (heptosyltransferase) K02843 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004936 368.0
CH3_k127_647784_0 PFAM EAL domain, GGDEF domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004061 521.0
CH3_k127_6546339_0 PFAM ABC-1 domain protein K03688 - - 9.425e-254 792.0
CH3_k127_6546339_1 Four helix bundle sensory module for signal transduction - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009478 594.0
CH3_k127_6546339_2 PFAM Patatin K07001 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005761 394.0
CH3_k127_6546339_3 - - - - 0.0000000000000000000000000000000000000000000000000000001635 202.0
CH3_k127_6546339_4 DsrE/DsrF-like family - - - 0.000000000000000000000000000000000000000000000000000001669 193.0
CH3_k127_6546339_5 PFAM NLP P60 protein - - - 0.00000000000000000000000000000000000000000000002771 175.0
CH3_k127_6546339_6 Type II secretory pathway, component - - - 0.0000000325 59.0
CH3_k127_667291_0 fad dependent oxidoreductase K07137 - - 7.374e-315 969.0
CH3_k127_667291_1 Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity K14540 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001151 494.0
CH3_k127_667291_2 abc transporter K02065 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000598 456.0
CH3_k127_667291_3 - - - - 0.000000000000000000000000000000000000000000000000000001486 197.0
CH3_k127_667291_4 UPF0056 membrane protein K05595 - - 0.0000000000000000000000000000000000000000000000000001291 194.0
CH3_k127_667291_5 - - - - 0.0000000000000000000000000000000000000000000001588 170.0
CH3_k127_667291_6 Putative zinc- or iron-chelating domain - - - 0.0000000000000000000000000000000003387 134.0
CH3_k127_667291_7 DsrE/DsrF/DrsH-like family - - - 0.00000000000000000002293 96.0
CH3_k127_6689220_0 Belongs to the monovalent cation proton antiporter 2 (cpa2) transporter (TC 2.A.37) family K03455 - - 4.495e-271 848.0
CH3_k127_6689220_1 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03092 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003554 565.0
CH3_k127_6689220_10 COG1762 Phosphotransferase system mannitol fructose-specific IIA domain (Ntr-type) K02806 - - 0.000000000000000000000000000000000000000000000000000000004289 203.0
CH3_k127_6689220_11 - K01992 - - 0.00000000000000000000000000000000000000000000000000000004514 207.0
CH3_k127_6689220_12 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.00000000000000000000000000000000000000000218 160.0
CH3_k127_6689220_13 sigma 54 modulation protein ribosomal protein S30EA K05808 - - 0.00000000000000000000000000000000000000001522 160.0
CH3_k127_6689220_14 Prokaryotic N-terminal methylation motif - - - 0.000000000000000000000000000000001289 139.0
CH3_k127_6689220_15 - - - - 0.0000000000000000000000003196 106.0
CH3_k127_6689220_16 Lipopolysaccharide-assembly, LptC-related K11719 - - 0.00000000000000000000005725 105.0
CH3_k127_6689220_17 NusG domain II - - - 0.000000000000000003774 93.0
CH3_k127_6689220_18 His Kinase A (phosphoacceptor) domain - - - 0.00000000000004039 76.0
CH3_k127_6689220_19 Belongs to the 5-formyltetrahydrofolate cyclo-ligase family K01934 - 6.3.3.2 0.0001291 46.0
CH3_k127_6689220_2 Belongs to the SIS family. GutQ KpsF subfamily K06041 - 5.3.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006641 484.0
CH3_k127_6689220_3 Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr) K06023 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004958 421.0
CH3_k127_6689220_4 Displays ATPase and GTPase activities K06958 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001022 415.0
CH3_k127_6689220_5 ABC transporter K06861 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003661 406.0
CH3_k127_6689220_6 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family K03270 - 3.1.3.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000001949 262.0
CH3_k127_6689220_7 Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane K09774 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003255 257.0
CH3_k127_6689220_8 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003357 244.0
CH3_k127_6689220_9 Heptaprenyl diphosphate synthase component I K00805 - 2.5.1.30 0.00000000000000000000000000000000000000000000000000000000002464 211.0
CH3_k127_6720716_0 NADH:flavin oxidoreductase / NADH oxidase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001204 498.0
CH3_k127_6720716_1 NYN domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003914 411.0
CH3_k127_6720716_2 Polysaccharide biosynthesis protein K03328 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001125 413.0
CH3_k127_6720716_3 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002029 365.0
CH3_k127_6720716_4 Cold shock protein K03704 - - 0.0000000000000000000000000000000000005554 139.0
CH3_k127_6720716_5 Thioredoxin domain - - - 0.000000000000000000009283 93.0
CH3_k127_676513_0 Metal-dependent hydrolase HDOD - - - 2.375e-234 750.0
CH3_k127_676513_1 DNA polymerase III is a complex multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3 to 5 exonuclease activity K02343 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005541 490.0
CH3_k127_676513_2 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002608 329.0
CH3_k127_676513_3 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.00000000000000000000000000000000000000000000002811 171.0
CH3_k127_678838_0 CBS domain containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000242 529.0
CH3_k127_678838_1 PFAM Cytochrome c assembly protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006006 278.0
CH3_k127_678838_2 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03106 - 3.6.5.4 0.0000000000000000000000000000000000000000000000459 171.0
CH3_k127_678838_3 thiamine biosynthesis protein ThiS K03154 - - 0.00000000000000000001406 93.0
CH3_k127_6847061_0 Bacterial lipid A biosynthesis acyltransferase K02517,K12974 - 2.3.1.241,2.3.1.242 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004317 516.0
CH3_k127_6847061_1 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 - 2.5.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001115 435.0
CH3_k127_6847061_2 Bacterial lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004913 345.0
CH3_k127_6847061_3 Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol, an intermediate step in ubiquinone biosynthesis K03182 - 4.1.1.98 0.0000000000000000000000000000000000000006312 149.0
CH3_k127_6868617_0 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 - 4.1.99.17 0.0 1184.0
CH3_k127_6868617_1 Signal transducing histidine kinase, homodimeric domain K02487,K06596 - - 2.861e-286 929.0
CH3_k127_6868617_2 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003395 362.0
CH3_k127_6868617_3 protein-L-isoaspartate(D-aspartate) O-methyltransferase K00573 - 2.1.1.77 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001875 297.0
CH3_k127_6868617_4 Rhodanese Homology Domain - - - 0.000000000000000000000000000000000000005713 147.0
CH3_k127_6868617_5 type I secretion outer membrane protein, TolC K12340 - - 0.000000000000000000000000000005083 122.0
CH3_k127_6868617_6 Sulfurtransferase - - - 0.00000000000000000009651 89.0
CH3_k127_6927072_0 Sigma factor PP2C-like phosphatases K20977 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005766 361.0
CH3_k127_6927072_1 STAS domain K20978 - - 0.000000000000001395 78.0
CH3_k127_6959435_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 0.0 1024.0
CH3_k127_6959435_1 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001422 429.0
CH3_k127_6959435_2 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008451 412.0
CH3_k127_6959435_3 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0032296,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363 3.1.26.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000561 284.0
CH3_k127_6959435_4 Domain of unknown function (DUF4845) - - - 0.000000000000000000002044 98.0
CH3_k127_6959435_5 Glutaredoxin-like domain (DUF836) K00384 - 1.8.1.9 0.000003476 48.0
CH3_k127_7008367_0 PFAM Chemotaxis methyl-accepting receptor, signalling - - - 0.0 1096.0
CH3_k127_7008367_1 Histidine kinase K03407 GO:0003674,GO:0005488,GO:0005515,GO:0019904 2.7.13.3 2.976e-244 775.0
CH3_k127_7008367_2 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001716 516.0
CH3_k127_7008367_3 Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP K00575 - 2.1.1.80 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005733 420.0
CH3_k127_7008367_4 CheD chemotactic sensory transduction K03411 - 3.5.1.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001364 293.0
CH3_k127_7008367_5 Two component signalling adaptor domain K03408 - - 0.00000000000000000000000000000000000000000000000000000000000000000008843 233.0
CH3_k127_7008367_6 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.00000000000000000000000000000000000000000000000000000000000000001303 239.0
CH3_k127_7008367_7 cheY-homologous receiver domain K03413 - - 0.0000000000000000000000000000000000000000000000000000000000001481 213.0
CH3_k127_7008367_8 Nitrite and sulphite reductase 4Fe-4S domain K11180 - 1.8.99.5 0.000000000000000000000000000000000003837 137.0
CH3_k127_7008367_9 STAS domain K20978 - - 0.0000000000000001643 81.0
CH3_k127_701460_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 0.0 1076.0
CH3_k127_701460_1 DNA protecting protein DprA K04096 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001297 459.0
CH3_k127_701460_2 PFAM Peptidoglycan-binding LysM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000719 437.0
CH3_k127_701460_3 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 - 2.1.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001176 309.0
CH3_k127_701460_4 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.00000000000000000000000000000000000000000000000000000000000000000000001129 245.0
CH3_k127_701460_5 Belongs to the Smg family K03747 - - 0.000000000000000000000000000000000000000002699 159.0
CH3_k127_7106051_0 DNA polymerase family B, exonuclease domain K07501 - - 0.0000000000000000000000000000000000000000001856 170.0
CH3_k127_7106051_1 - - - - 0.000000000000000000000000000000000000000001629 163.0
CH3_k127_7120957_0 serine O-acetyltransferase K00640 - 2.3.1.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004646 409.0
CH3_k127_7120957_1 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000186 284.0
CH3_k127_7120957_2 Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA K02533 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004102 282.0
CH3_k127_7120957_3 Iron-sulfur cluster assembly transcription factor IscR K13643 - - 0.0000000000000000000000000000000000000000000000000000000000000000001994 233.0
CH3_k127_7120957_4 Inositol monophosphatase K01092 - 3.1.3.25 0.00000000000000000000000000034 115.0
CH3_k127_7123252_0 COG0474 Cation transport ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000285 405.0
CH3_k127_7123252_1 PFAM TatD-related deoxyribonuclease K03424 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006283 352.0
CH3_k127_7123252_2 Phosphate-starvation-inducible E - - - 0.00000000000000000000000000000000000000000000000185 179.0
CH3_k127_7168794_0 Penicillin-binding protein OB-like domain K05366 - 2.4.1.129,3.4.16.4 8.27e-198 627.0
CH3_k127_7168794_1 Type IV pilus assembly protein PilM; K02662 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000179 370.0
CH3_k127_717504_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007215 359.0
CH3_k127_717504_1 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008614 282.0
CH3_k127_717504_2 Uncharacterized protein conserved in bacteria (DUF2252) - - - 0.0000000000000000000000002819 105.0
CH3_k127_7269553_0 membrane - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005404 342.0
CH3_k127_7269553_1 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03564 - 1.11.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005184 293.0
CH3_k127_7269553_2 Transport of potassium into the cell K03549 - - 0.0000000000000006926 77.0
CH3_k127_7269658_0 Belongs to the pseudomonas-type ThrB family K02204 - 2.7.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001885 475.0
CH3_k127_7269658_1 - - - - 0.0000000000000000000000000000001822 131.0
CH3_k127_7272744_0 Dynamin family - - - 3.867e-311 964.0
CH3_k127_7272744_1 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 - 3.2.2.23,4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001017 399.0
CH3_k127_7272744_2 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.00000000000000000000000000000000000000000000000000000000000000000799 228.0
CH3_k127_7272744_3 4Fe-4S binding domain - - - 0.000000000000000000000000000000000000000002122 156.0
CH3_k127_7272744_4 RNA methyltransferase, RsmD family - - - 0.0002559 44.0
CH3_k127_7294117_0 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 7.049e-194 607.0
CH3_k127_7294117_1 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000456 434.0
CH3_k127_7294117_2 TIGRFAM HAD-superfamily hydrolase, subfamily IA, variant 3 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001684 382.0
CH3_k127_7294117_3 Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters K06204 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005037 256.0
CH3_k127_7294117_4 - - - - 0.00000000000000000000000000000000000000000000000000000005321 200.0
CH3_k127_7294117_5 - - - - 0.0000000000001855 72.0
CH3_k127_7351670_0 COG2804 Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB K02652 - - 3.322e-251 786.0
CH3_k127_7351670_1 PFAM type II secretion system K02653 - - 5.814e-195 614.0
CH3_k127_7351670_2 Putative S-adenosyl-L-methionine-dependent methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008819 278.0
CH3_k127_7351670_3 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.000000000000000000000000000000000000007354 146.0
CH3_k127_7355139_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00123,K05299 - 1.17.1.10,1.17.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002291 406.0
CH3_k127_7355139_1 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003121 396.0
CH3_k127_7355139_2 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.0000000000000000000000000000000000000000000000003627 179.0
CH3_k127_7355139_3 - - - - 0.0000000000000000000000000000000521 129.0
CH3_k127_7397985_1 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K01834 - 5.4.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003615 308.0
CH3_k127_7397985_2 cell adhesion K02650 - - 0.000000000000000000000000000000000000000000000000000000000000001539 226.0
CH3_k127_7397985_3 Aminotransferase class-III K00821 - 2.6.1.11,2.6.1.17 0.000000000000000000000000000000000000000003122 156.0
CH3_k127_7415289_0 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00833 - 2.6.1.62 7.147e-232 722.0
CH3_k127_7415289_1 HipA N-terminal domain K07154 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003046 571.0
CH3_k127_7415289_2 Beta-Casp domain K07576 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003388 464.0
CH3_k127_7415289_3 Helix-turn-helix XRE-family like proteins - - - 0.0000000000000000000004727 98.0
CH3_k127_7415289_4 SEC-C motif - - - 0.0000000000415 64.0
CH3_k127_7460171_0 Carbohydrate phosphorylase K00688 - 2.4.1.1 0.0 1162.0
CH3_k127_7460171_1 Phage derived protein Gp49-like (DUF891) - - - 0.00000000000000000000000000000000000000000008851 162.0
CH3_k127_7460171_2 Helix-turn-helix domain - - - 0.000000000000000000000000001709 119.0
CH3_k127_7471108_0 Glycosyl transferase family 21 - - - 0.0 1155.0
CH3_k127_7471108_1 Cellulose biosynthesis protein BcsS - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001714 357.0
CH3_k127_7471108_2 bacterial-type flagellum-dependent cell motility - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001159 257.0
CH3_k127_7471108_3 SnoaL-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004401 252.0
CH3_k127_7471108_4 alpha/beta hydrolase fold - - - 0.000000000000000000000000000000000000005054 151.0
CH3_k127_7510311_0 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00412 - - 5.095e-237 736.0
CH3_k127_7510311_1 Belongs to the peptidase S1C family K04691,K04772 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006198 550.0
CH3_k127_7510311_10 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell K03282 GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006884,GO:0008150,GO:0008361,GO:0008381,GO:0009987,GO:0009992,GO:0015267,GO:0016020,GO:0016021,GO:0016043,GO:0019725,GO:0022803,GO:0022836,GO:0022857,GO:0030104,GO:0031224,GO:0032535,GO:0042592,GO:0044425,GO:0048878,GO:0051179,GO:0051234,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0071840,GO:0090066 - 0.00000000000000000000000000000000000000000000000000000000671 201.0
CH3_k127_7510311_11 Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP K01496,K11755 - 3.5.4.19,3.6.1.31 0.0000000000000000000000000000000000000000000000000000005954 193.0
CH3_k127_7510311_12 Histidine triad (Hit) protein K02503 - - 0.00000000000000000000000000000000000000000000000003916 180.0
CH3_k127_7510311_13 Phosphoribosyl-ATP K01523 - 3.6.1.31 0.0000000000000000000000000000000000000000000002872 169.0
CH3_k127_7510311_14 PFAM Stringent starvation protein B K03600 - - 0.0000000000000000000000000000000000000001959 154.0
CH3_k127_7510311_15 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.00000000000000000000000005554 108.0
CH3_k127_7510311_16 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation K03117 - - 0.0000000000000000000000118 105.0
CH3_k127_7510311_2 Uncharacterised protein family (UPF0160) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007584 520.0
CH3_k127_7510311_3 Glutathione S-transferase K03599 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006666 363.0
CH3_k127_7510311_4 Cytochrome C1 family K00413 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001532 344.0
CH3_k127_7510311_5 dinuclear metal center protein, YbgI - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005154 343.0
CH3_k127_7510311_6 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007111 339.0
CH3_k127_7510311_7 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00411 - 1.10.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000141 331.0
CH3_k127_7510311_8 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.000000000000000000000000000000000000000000000000000000000000000016 240.0
CH3_k127_7510311_9 Atp-dependent helicase K03578 - 3.6.4.13 0.0000000000000000000000000000000000000000000000000000000000004164 214.0
CH3_k127_7547381_0 Domain of unknown function (DUF4143) K07133 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005359 347.0
CH3_k127_7547381_1 Protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000645 308.0
CH3_k127_7547381_2 Uncharacterised protein family UPF0047 - - - 0.0000000000000000000000000000000000000000000000000000000001825 206.0
CH3_k127_7547381_3 lipoprotein releasing system, transmembrane protein, LolC E family K09808 - - 0.000000000000000000000000001421 112.0
CH3_k127_7578803_0 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 3.716e-259 807.0
CH3_k127_7578803_1 Belongs to the folylpolyglutamate synthase family K11754 - 6.3.2.12,6.3.2.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002958 530.0
CH3_k127_7578803_2 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002174 496.0
CH3_k127_7578803_3 colicin v production K03558 - - 0.0000000000000000000000000000000000000000000000000000001465 199.0
CH3_k127_7578803_4 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.00000000000000000000000000000000000000000005135 163.0
CH3_k127_7578803_5 PFAM Sporulation domain protein K03749 - - 0.0000000000000000000000000000000000000000046 163.0
CH3_k127_7578803_6 - - - - 0.000000000000000000000000000000000000000004809 164.0
CH3_k127_7582021_0 Pfam Integrase core domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002005 550.0
CH3_k127_7582021_1 MULE transposase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001917 454.0
CH3_k127_7582021_2 TonB dependent receptor K02014 - - 0.0005311 42.0
CH3_k127_7741350_0 G-rich domain on putative tyrosine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002825 578.0
CH3_k127_7741350_1 Part of the ABC transporter complex NodIJ involved in the export of the nodulation factors (Nod factors), the bacterial signal molecules that induce symbiosis and subsequent nodulation induction. Nod factors are LCO (lipo-chitin oligosaccharide), a modified beta-1,4-linked N-acetylglucosamine oligosaccharide. This subunit is responsible for energy coupling to the transport system K01990,K09695 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007057 451.0
CH3_k127_7741350_10 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety K03286 - - 0.000000000000000002529 88.0
CH3_k127_7741350_2 SMART AAA ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003119 416.0
CH3_k127_7741350_3 ABC-2 type transporter K09694 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002959 409.0
CH3_k127_7741350_4 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002242 413.0
CH3_k127_7741350_5 NUBPL iron-transfer P-loop NTPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005457 361.0
CH3_k127_7741350_6 Polysaccharide biosynthesis/export protein K01991 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005136 284.0
CH3_k127_7741350_7 hydrolase of the alpha beta superfamily K07018 - - 0.0000000000000000000000000000000000000000000000000000000001313 209.0
CH3_k127_7741350_8 Ferredoxin - - - 0.0000000000000000000000000000000000000000000000546 170.0
CH3_k127_7741350_9 MazG-like family - - - 0.000000000000000000000000000000000000005564 148.0
CH3_k127_7757102_0 DNA internalization-related competence protein ComEC Rec2 K02238 - - 0.0 1036.0
CH3_k127_7757102_1 Cation transporting ATPase, C-terminus - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000481 503.0
CH3_k127_7757102_2 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 0.00000000000000000000000000000000002661 139.0
CH3_k127_7790479_0 Putative diguanylate phosphodiesterase - - - 0.0 1064.0
CH3_k127_7790479_1 chemotaxis, protein K03406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009169 376.0
CH3_k127_7790479_2 Ribosomal RNA adenine dimethylases K02528 - 2.1.1.182 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001569 339.0
CH3_k127_7790479_3 Glyoxalase K01759 - 4.4.1.5 0.0000000000000000000000000000000000000000000000000000000000000000001043 231.0
CH3_k127_7790479_4 Protein of unknown function DUF45 K07043 - - 0.00000000000000000000000000000000000000004179 156.0
CH3_k127_7800318_0 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 - 6.1.1.1 1.999e-196 618.0
CH3_k127_7800318_1 Peptidase family M23 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009861 520.0
CH3_k127_7800318_2 Anhydro-N-acetylmuramic acid kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005909 439.0
CH3_k127_7800318_3 Belongs to the sulfotransferase 1 family K01014,K01016,K01025,K16949 GO:0003674,GO:0003824,GO:0004062,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006790,GO:0008146,GO:0008150,GO:0008152,GO:0009987,GO:0016740,GO:0016782,GO:0034930,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0051923 2.8.2.1,2.8.2.3,2.8.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002296 350.0
CH3_k127_7800318_4 Pyridoxal-dependent decarboxylase conserved domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002193 277.0
CH3_k127_7800318_5 ligase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001774 264.0
CH3_k127_7800318_6 Iron-sulphur cluster biosynthesis K15724 - - 0.000000000000000000000000000000000000000000000000000000000001912 210.0
CH3_k127_7800318_7 Sulfotransferase family - - - 0.0000000000000000000000000000000005857 143.0
CH3_k127_7800514_0 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005248 503.0
CH3_k127_7800514_1 TIGRFAM transporter, hydrophobe amphiphile efflux-1 (HAE1) family K18138 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001665 467.0
CH3_k127_7800514_2 Bacterial regulatory proteins, tetR family - - - 0.0000585 47.0
CH3_k127_7849123_0 Ammonium Transporter Family K03320,K06580 - - 1.592e-227 708.0
CH3_k127_7849123_1 Cysteine-rich domain K03389 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004548 474.0
CH3_k127_7849123_2 HDOD domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001002 279.0
CH3_k127_7849123_3 - - - - 0.000000000000000000000000001261 115.0
CH3_k127_7849123_4 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated K00567,K10778 GO:0001130,GO:0003674,GO:0003700,GO:0003824,GO:0003908,GO:0005488,GO:0006139,GO:0006259,GO:0006281,GO:0006304,GO:0006307,GO:0006355,GO:0006464,GO:0006479,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008168,GO:0008172,GO:0008213,GO:0008270,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0016740,GO:0016741,GO:0018125,GO:0018193,GO:0018198,GO:0019219,GO:0019222,GO:0019538,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0032259,GO:0033554,GO:0034641,GO:0035510,GO:0036211,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044728,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0046483,GO:0046872,GO:0046914,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0051716,GO:0060255,GO:0065007,GO:0070988,GO:0071704,GO:0080090,GO:0080111,GO:0090304,GO:0140110,GO:1901360,GO:1901564,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:2000112,GO:2000113,GO:2001141 2.1.1.63 0.0006524 42.0
CH3_k127_7879491_0 Protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004213 351.0
CH3_k127_7879491_1 Protein of unknown function (DUF1318) K09978 - - 0.00000000000000000000000000000000000000000000001841 173.0
CH3_k127_7879491_2 3-5 exonuclease K07501 - - 0.0000000000000000000000000000002538 124.0
CH3_k127_7879491_3 - - - - 0.000000000006282 67.0
CH3_k127_7931176_0 Transposase - - - 4.915e-236 738.0
CH3_k127_7932258_0 response regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000229 548.0
CH3_k127_7932258_1 Metal dependent phosphohydrolases with conserved 'HD' motif. K07814 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002959 428.0
CH3_k127_7932258_2 Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity K00765 - 2.4.2.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002234 356.0
CH3_k127_7932258_3 Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor K03524 - 6.3.4.15 0.00000000000335 67.0
CH3_k127_8166184_0 ABC transporter K02065 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004195 457.0
CH3_k127_8166184_1 Permease MlaE K02066 - - 0.000000000000000000000000000000000000000000000000000001845 198.0
CH3_k127_8166184_2 Protein of unknown function DUF72 - - - 0.00000000000000000000000000000000001273 140.0
CH3_k127_8166751_0 Transcriptional regulator K03717 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003098 556.0
CH3_k127_8166751_1 Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate K01952 - 6.3.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005293 551.0
CH3_k127_8166751_10 Protein of unknown function (DUF1232) - - - 0.0000000000000000000000001206 108.0
CH3_k127_8166751_2 membrane protein, terc K05794 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003696 538.0
CH3_k127_8166751_3 Belongs to the peptidase M48B family K03799 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006528 524.0
CH3_k127_8166751_4 Uncharacterized protein family, UPF0114 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008109 307.0
CH3_k127_8166751_5 TonB C terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005209 285.0
CH3_k127_8166751_6 Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene K03664 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005012 262.0
CH3_k127_8166751_7 Polyketide cyclase / dehydrase and lipid transport - - - 0.00000000000000000000000000000000000000000000000000002817 191.0
CH3_k127_8166751_8 translation initiation factor activity K08086 - - 0.00000000000000000000000000000000000000000001554 184.0
CH3_k127_8166751_9 Belongs to the UPF0125 (RnfH) family K09801 - - 0.0000000000000000000000000000000001367 136.0
CH3_k127_8190873_0 SMART von Willebrand factor type A - - - 1.704e-267 827.0
CH3_k127_8190873_1 elongation factor Tu K02358 - - 2.241e-201 628.0
CH3_k127_8201272_0 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 0.0 1098.0
CH3_k127_8201272_1 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 - 6.3.4.4 1.25e-255 791.0
CH3_k127_8201272_2 Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine K02502 - - 0.000000000000000000000000000002939 122.0
CH3_k127_8201272_3 Specifically methylates the ribose of guanosine 2251 in 23S rRNA K03218 - 2.1.1.185 0.000000000000000000257 89.0
CH3_k127_8240645_0 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002866 488.0
CH3_k127_8240645_1 Prokaryotic N-terminal methylation motif - - - 0.000000000000000000000000000000000000000000000000000000000000000003921 235.0
CH3_k127_8240645_2 - - - - 0.000000000001218 74.0
CH3_k127_8348953_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 5.942e-270 835.0
CH3_k127_8348953_1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 4.427e-253 788.0
CH3_k127_8348953_2 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K04042 - 2.3.1.157,2.7.7.23 4.759e-203 642.0
CH3_k127_8348953_3 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005626 395.0
CH3_k127_8348953_4 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 - - 0.00000000000000000000000000000000000000000000000000000000001815 208.0
CH3_k127_8429139_0 ZIP Zinc transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006034 441.0
CH3_k127_8429139_1 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 0.0000000000000000000000000000000000000000000000000001634 189.0
CH3_k127_8429139_2 Type II secretion system (T2SS), protein K - - - 0.000000000000000000000000000000000001107 140.0
CH3_k127_8429139_3 - - - - 0.0000006247 53.0
CH3_k127_8457064_0 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 4.816e-244 762.0
CH3_k127_8457064_1 Aminotransferase K00821 - 2.6.1.11,2.6.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005118 428.0
CH3_k127_8457064_2 Pfam:DUF989 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005906 269.0
CH3_k127_8457064_3 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.00000000000000000000000000000000000000000000000000000005329 198.0
CH3_k127_8457064_4 Binds directly to 16S ribosomal RNA K02968 - - 0.000000000000000000000000000000009565 130.0
CH3_k127_8457064_5 Protein of unknown function (DUF3579) - - - 0.000000000000000000000000000001178 123.0
CH3_k127_8491197_0 Phage integrase, N-terminal SAM-like domain K03733 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001269 402.0
CH3_k127_8491197_1 protein conserved in bacteria K09921 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000007656 263.0
CH3_k127_8491197_2 Belongs to the anti-sigma-factor antagonist family - - - 0.00000000000000000000000000000000000005095 153.0
CH3_k127_8512605_0 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005906 494.0
CH3_k127_8512605_1 TIGRFAM transporter, hydrophobe amphiphile efflux-1 (HAE1) family K18138 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005528 340.0
CH3_k127_8613109_0 alpha-glucan phosphorylase K00688 - 2.4.1.1 0.0 1344.0
CH3_k127_8613109_1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 5.464e-266 823.0
CH3_k127_8613109_10 iron assimilation K07223 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001912 387.0
CH3_k127_8613109_11 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001504 370.0
CH3_k127_8613109_12 Belongs to the pirin family K06911 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003437 360.0
CH3_k127_8613109_13 Nitroreductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005338 356.0
CH3_k127_8613109_14 domain, Protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001792 354.0
CH3_k127_8613109_15 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003611 372.0
CH3_k127_8613109_16 Dienelactone hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001431 340.0
CH3_k127_8613109_17 3'-to-5' exoribonuclease specific for small oligoribonucleotides K13288 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001939 317.0
CH3_k127_8613109_18 Belongs to the UPF0178 family K09768 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002689 252.0
CH3_k127_8613109_19 protein phosphatase 2C domain protein K20074 - 3.1.3.16 0.000000000000000000000000000000000000000000000000000000000000000003459 234.0
CH3_k127_8613109_2 cyclic 2,3-diphosphoglycerate synthetase activity - - - 1.051e-206 651.0
CH3_k127_8613109_20 - - - - 0.0000000000000000000000000000000000000000000000000000000000000008209 224.0
CH3_k127_8613109_21 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 GO:0000725,GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008047,GO:0008150,GO:0008152,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0030234,GO:0031668,GO:0033554,GO:0034641,GO:0042802,GO:0043085,GO:0043170,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050790,GO:0050896,GO:0051716,GO:0065007,GO:0065009,GO:0071496,GO:0071704,GO:0090304,GO:0097159,GO:0098772,GO:1901360,GO:1901363 - 0.000000000000000000000000000000000000000000000000000000000000003166 219.0
CH3_k127_8613109_22 Peptidyl-prolyl cis-trans isomerase K01802,K03772 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000001799 205.0
CH3_k127_8613109_23 Ami_3 K01448 - 3.5.1.28 0.0000000000000000000000000000000000000000000000000001485 195.0
CH3_k127_8613109_24 diol metabolic process K01724 - 4.2.1.96 0.000000000000000000000000000000000000000000000005862 174.0
CH3_k127_8613109_25 crp fnr family K01420 - - 0.0000000000000000000000000000000000000000000003961 175.0
CH3_k127_8613109_26 SEC-C domain protein K09858 - - 0.000000000000000000000000000000000000000000003877 168.0
CH3_k127_8613109_27 Belongs to the glutaredoxin family. Monothiol subfamily K07390 - - 0.00000000000000000000000000000000000000000001402 163.0
CH3_k127_8613109_28 gag-polyprotein putative aspartyl protease K06985 - - 0.0000000000000000000000000000000000000000003513 163.0
CH3_k127_8613109_29 SseB protein N-terminal domain - - - 0.000000000000000000000000000000000000000005111 158.0
CH3_k127_8613109_3 SMART PUA domain containing protein K06969 - 2.1.1.191 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005114 603.0
CH3_k127_8613109_30 Putative diguanylate phosphodiesterase - - - 0.00000000000000000000000000000000001066 146.0
CH3_k127_8613109_31 Transcriptional regulator - - - 0.00000000000000000000000000000000002677 138.0
CH3_k127_8613109_32 Cytochrome c - - - 0.0000000000000000000000000000000001144 135.0
CH3_k127_8613109_33 Belongs to the BolA IbaG family - - - 0.000000000000000000000000000025 118.0
CH3_k127_8613109_34 - - - - 0.00000000000000000001286 94.0
CH3_k127_8613109_35 - - - - 0.00000000000000000002201 93.0
CH3_k127_8613109_36 - - - - 0.00000000000000000006823 99.0
CH3_k127_8613109_37 Protein of unknown function (DUF465) - - - 0.000000000005028 68.0
CH3_k127_8613109_38 Phosphoglycerate kinase K15634,K15640 - 5.4.2.12 0.000000002417 65.0
CH3_k127_8613109_4 Diguanylate cyclase (GGDEF) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000397 574.0
CH3_k127_8613109_5 PFAM Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001219 559.0
CH3_k127_8613109_6 PFAM Peptidase M48 K06013 - 3.4.24.84 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004932 549.0
CH3_k127_8613109_7 Domain of unknown function (DUF1730) K18979 - 1.17.99.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003811 544.0
CH3_k127_8613109_8 ATP adenylyltransferase (5',5''-P-1,P-4-tetraphosphate phosphorylase II) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009625 487.0
CH3_k127_8613109_9 Provides the (R)-glutamate required for cell wall biosynthesis K01776 - 5.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001237 458.0
CH3_k127_8625495_0 Bacterial extracellular solute-binding protein, family 7 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005506 437.0
CH3_k127_8625495_1 TRAP transporter T-component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002055 391.0
CH3_k127_8625495_2 of the drug metabolite transporter (DMT) superfamily K15270 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007121 359.0
CH3_k127_8625495_3 Belongs to the FPP GGPP synthase family K00795 - 2.5.1.1,2.5.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000006199 245.0
CH3_k127_8625495_4 SpoIIAA-like - - - 0.00000000000000000000000000000000000000008728 153.0
CH3_k127_8625495_5 Protein of Unknown function (DUF2784) - - - 0.00000000000000000000000000000000001438 138.0
CH3_k127_8625495_6 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.00000000000000000000006665 100.0
CH3_k127_8680778_0 Type III restriction - - - 0.0 1294.0
CH3_k127_8680778_1 PFAM NADH Ubiquinone plastoquinone (complex I) K05568 - - 7.594e-203 646.0
CH3_k127_8680778_2 universal stress protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001634 501.0
CH3_k127_8680778_3 Formate hydrogenlyase subunit 3 Multisubunit Na H antiporter MnhD subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001256 474.0
CH3_k127_8680778_4 Domain related to MnhB subunit of Na+/H+ antiporter - - - 0.000000000000000000000000000000000000000009846 166.0
CH3_k127_8680778_5 PFAM Na H antiporter subunit K05571 - - 0.00000000000000000000000000001285 122.0
CH3_k127_8680778_6 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L K05567 - - 0.0000000000000000000000000002262 117.0
CH3_k127_8680778_7 Na+/H+ ion antiporter subunit K05569 - - 0.0000000000000000000000002627 111.0
CH3_k127_8680778_8 Domain of unknown function (DUF4040) - - - 0.000000000000000000001187 99.0
CH3_k127_8680778_9 Multiple resistance and pH regulation protein F K05570 - - 0.000000000000000004762 87.0
CH3_k127_8699812_0 Sigma-54 interaction domain - - - 1.83e-236 739.0
CH3_k127_8699812_1 SMART PAS domain containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001304 596.0
CH3_k127_8699812_2 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006685 503.0
CH3_k127_8699812_3 PFAM Sporulation domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001812 376.0
CH3_k127_8699812_4 ATPase activity, coupled to transmembrane movement of substances - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000283 307.0
CH3_k127_8699812_5 endonuclease III K01247 - 3.2.2.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000002637 263.0
CH3_k127_8699812_6 CHASE - - - 0.000000000000000000000000000000000000000000000000000000000000000000000006621 278.0
CH3_k127_8699812_7 response regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004011 255.0
CH3_k127_8699812_8 Transcriptional regulatory protein, C terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000007583 229.0
CH3_k127_8699812_9 cheY-homologous receiver domain - - - 0.00000000000000000000000000000000000000000000000009421 181.0
CH3_k127_871098_0 PFAM glycosyl transferase family 39 - - - 9.831e-222 700.0
CH3_k127_871098_1 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001158 574.0
CH3_k127_871098_2 DegT/DnrJ/EryC1/StrS aminotransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005815 254.0
CH3_k127_871098_3 Small MutS-related domain - - - 0.0000000000000000000000000000000000000000000000000000000000004056 216.0
CH3_k127_871098_4 Small Multidrug Resistance protein - - - 0.0000000000000000000000000000000000000000000000000000000001778 205.0
CH3_k127_8714633_0 LppC putative lipoprotein K07121 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001169 319.0
CH3_k127_8714633_1 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate K03271 - 5.3.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002405 309.0
CH3_k127_8714633_2 PFAM transport-associated - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001573 252.0
CH3_k127_8714633_3 Belongs to the UPF0102 family K07460 - - 0.00000000000000000000000000000000000004874 146.0
CH3_k127_8714633_4 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 GO:0000154,GO:0000451,GO:0000453,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070677,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.198 0.0000001163 55.0
CH3_k127_8766511_0 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen K00990 - 2.7.7.59 6.059e-221 699.0
CH3_k127_8804658_0 FIST_C - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006427 513.0
CH3_k127_8804658_1 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002363 336.0
CH3_k127_8804658_2 Domain of unknown function (DUF1841) - - - 0.00000000000000000000000000000000000000000000000000000002721 200.0
CH3_k127_8808783_0 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 6.551e-251 781.0
CH3_k127_8808783_1 Domain of unknown function (DUF3391) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001574 415.0
CH3_k127_8808783_2 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005338 358.0
CH3_k127_8808783_3 PFAM HPP family protein K07168 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006947 281.0
CH3_k127_8808783_4 - - - - 0.00000000000000000000000001677 110.0
CH3_k127_8824321_0 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 - 6.5.1.2 3e-322 997.0
CH3_k127_8824321_1 Required for chromosome condensation and partitioning K03529 - - 2.656e-214 698.0
CH3_k127_8824321_10 Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose K00067,K01790 - 1.1.1.133,5.1.3.13 0.0000000000000000000000000000000000000000000000000000000000003815 214.0
CH3_k127_8824321_2 Putative zinc binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000252 610.0
CH3_k127_8824321_3 PFAM NAD-dependent epimerase dehydratase K01709 - 4.2.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000171 499.0
CH3_k127_8824321_4 UTP-glucose-1-phosphate uridylyltransferase K00963 - 2.7.7.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008794 447.0
CH3_k127_8824321_5 Glucose-1-phosphate cytidylyltransferase K00978 - 2.7.7.33 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003477 421.0
CH3_k127_8824321_6 Purine nucleoside phosphorylase which is highly specific for 6-oxopurine nucleosides. Cleaves guanosine or inosine to respective bases and sugar-1-phosphate molecules. Involved in purine salvage K00772,K03815 - 2.4.2.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001822 396.0
CH3_k127_8824321_7 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006724 304.0
CH3_k127_8824321_8 Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001615 314.0
CH3_k127_8824321_9 phosphoribosyltransferase K00760 - 2.4.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002799 271.0
CH3_k127_8827902_0 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00161,K21416 - 1.2.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003746 576.0
CH3_k127_8827902_1 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003263 409.0
CH3_k127_8827902_2 PFAM Transketolase central region K00162,K21417 - 1.2.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005833 374.0
CH3_k127_8843596_0 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005149 491.0
CH3_k127_8843596_1 RNA polymerase sigma K03089 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003114 394.0
CH3_k127_8843596_2 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009396 344.0
CH3_k127_8843596_3 Ribosomal protein L11 methyltransferase (PrmA) - - - 0.0000000000000000000000000000000000000000000000000000001455 195.0
CH3_k127_8843596_4 Preprotein translocase subunit K03210 - - 0.0000000000000000000000000000001146 127.0
CH3_k127_8860330_0 Sodium Bile acid symporter family K03325 - - 1.055e-205 645.0
CH3_k127_8860330_1 Iron-containing alcohol dehydrogenase K00001 - 1.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002812 507.0
CH3_k127_8860330_2 Low molecular weight phosphatase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000008441 260.0
CH3_k127_8860330_3 LemA family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003719 254.0
CH3_k127_8860330_4 Low molecular weight phosphatase family K03741 - 1.20.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000161 239.0
CH3_k127_8860330_5 glyoxalase bleomycin resistance protein dioxygenase - - - 0.00000000000000000000000000000000000000000000000000002933 192.0
CH3_k127_8860330_6 - - - - 0.0000000000000000000000000000000001751 134.0
CH3_k127_8860330_7 - - - - 0.00000000002643 64.0
CH3_k127_8860330_8 - - - - 0.0000008224 59.0
CH3_k127_8860330_9 - - - - 0.000408 43.0
CH3_k127_8890949_0 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 1.992e-286 887.0
CH3_k127_8890949_1 Belongs to the FAD-dependent oxidoreductase 2 family. FRD SDH subfamily K00239 - 1.3.5.1,1.3.5.4 3.185e-276 859.0
CH3_k127_8890949_10 Glutaredoxin-like domain (DUF836) K00384 - 1.8.1.9 0.000000000000000000009566 95.0
CH3_k127_8890949_11 PFAM Positive regulator of sigma(E) RseC MucC K03803 - - 0.00000000000000000001121 98.0
CH3_k127_8890949_12 TIGRFAM Succinate dehydrogenase, cytochrome b556 subunit K00241 - - 0.000000000000004719 79.0
CH3_k127_8890949_13 Flavinator of succinate dehydrogenase K09159 - - 0.000000000006163 71.0
CH3_k127_8890949_2 Belongs to the peptidase S1C family K04771 - 3.4.21.107 8.838e-201 634.0
CH3_k127_8890949_3 Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family K00240 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009060,GO:0009987,GO:0015980,GO:0016020,GO:0016491,GO:0022900,GO:0022904,GO:0044237,GO:0044464,GO:0045333,GO:0048037,GO:0051536,GO:0051537,GO:0051538,GO:0051539,GO:0051540,GO:0055114,GO:0071944 1.3.5.1,1.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001908 404.0
CH3_k127_8890949_4 RNA polymerase sigma factor K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004976 329.0
CH3_k127_8890949_5 PFAM metal-dependent phosphohydrolase, HD sub domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001142 304.0
CH3_k127_8890949_6 negative regulator of sigma E activity K03598 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001448 293.0
CH3_k127_8890949_7 Succinate dehydrogenase hydrophobic membrane anchor protein K00242 - - 0.00000000000000000000000000000005677 129.0
CH3_k127_8890949_8 PFAM Anti sigma-E protein RseA family protein K03597 - - 0.0000000000000000000002951 104.0
CH3_k127_8890949_9 Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins K19168 - - 0.0000000000000000000004407 101.0
CH3_k127_8901843_0 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K02535 - 3.5.1.108 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008752 462.0
CH3_k127_8901843_1 Protein of unknown function (DUF1615) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004226 463.0
CH3_k127_8901843_2 Specifically methylates the adenine in position 2030 of 23S rRNA K07115 - 2.1.1.266 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003757 397.0
CH3_k127_8901843_3 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.0000000000000000000000000000000000000000000000000000000000000000002851 232.0
CH3_k127_8901843_4 - - - - 0.0000000789 55.0
CH3_k127_8940839_0 general secretion pathway protein K K02460 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002321 381.0
CH3_k127_8940839_1 Subtilase family K14645 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001476 374.0
CH3_k127_8940839_2 General Secretion Pathway protein K02456 - - 0.000000000000000000000000000000000000000000000000000000000000000000004132 237.0
CH3_k127_8940839_3 General secretion pathway protein K02459 GO:0002790,GO:0006810,GO:0008104,GO:0008150,GO:0009306,GO:0009987,GO:0015031,GO:0015628,GO:0015833,GO:0032940,GO:0033036,GO:0042886,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0098776 - 0.000000000000000000000000000000000000000000000000000000000004184 213.0
CH3_k127_8940839_4 CAAX protease self-immunity K07052 - - 0.000000000000000000000000000000000000000002282 164.0
CH3_k127_8940839_5 general secretion pathway protein K02457 - - 0.00000000000000000000000000000000000000001093 159.0
CH3_k127_8940839_6 General secretion pathway protein F K02455 - - 0.0000000000000000000000000001105 115.0
CH3_k127_8940839_7 General secretion pathway protein I K02458 GO:0002790,GO:0006810,GO:0008104,GO:0008150,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0032940,GO:0033036,GO:0042886,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0071702,GO:0071705 - 0.00000000000000000000000007433 113.0
CH3_k127_8940839_9 PFAM General secretion pathway L K02461 - - 0.0000003269 53.0
CH3_k127_8952939_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 9.833e-293 906.0
CH3_k127_8952939_1 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 - - 7.803e-222 693.0
CH3_k127_8952939_2 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005913 474.0
CH3_k127_8952939_3 phytoene synthase K02291 - 2.5.1.32,2.5.1.99 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003177 385.0
CH3_k127_8952939_4 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005496 376.0
CH3_k127_8952939_5 phytoene synthase K02291 - 2.5.1.32,2.5.1.99 0.00000000000000000000000000000000000000000000001405 174.0
CH3_k127_9002170_0 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 9.626e-231 718.0
CH3_k127_9002170_1 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002386 589.0
CH3_k127_9002170_2 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005327 412.0
CH3_k127_9002170_3 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly K03589 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001547 312.0
CH3_k127_9002170_4 cell wall formation K00075 - 1.3.1.98 0.000000000000000000000000000000000000000000000000000000000000000000000000005337 255.0
CH3_k127_9006484_0 Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine K12960 - 3.5.4.28,3.5.4.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002664 609.0
CH3_k127_9006484_1 Involved in the tonB-independent uptake of proteins K03641 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000353 552.0
CH3_k127_9006484_10 Belongs to the ompA family K03286 - - 0.0000000000000000000000000000000000000000000000000000000000000678 215.0
CH3_k127_9006484_12 - - - - 0.000002104 50.0
CH3_k127_9006484_2 transporter component K07112 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000142 550.0
CH3_k127_9006484_3 O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway K00568 - 2.1.1.222,2.1.1.64 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002577 374.0
CH3_k127_9006484_4 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001443 364.0
CH3_k127_9006484_5 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) K06920 - 6.3.4.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007318 340.0
CH3_k127_9006484_6 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0008144,GO:0016829,GO:0016840,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0046872,GO:0046983,GO:0048037,GO:0050662,GO:0051536,GO:0051539,GO:0051540,GO:1901681,GO:1904047 4.3.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005024 332.0
CH3_k127_9006484_7 Phosphoglycolate phosphatase K22292 - 3.1.3.105 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001031 312.0
CH3_k127_9006484_8 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001055 251.0
CH3_k127_9006484_9 Belongs to the ompA family K03640 - - 0.000000000000000000000000000000000000000000000000000000000000000000007791 237.0
CH3_k127_9025422_0 PFAM permease K07089 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000455 514.0
CH3_k127_9025422_1 Rhodanese Homology Domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001494 389.0
CH3_k127_9025422_2 SMART Rhodanese domain protein K01011 - 2.8.1.1,2.8.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001034 387.0
CH3_k127_9025422_3 Rhodanese Homology Domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007404 372.0
CH3_k127_9025422_4 Thioredoxin domain - - - 0.00000000000000000000000000000000007198 141.0
CH3_k127_9025422_5 - - - - 0.0000000000000000000000000000001959 125.0
CH3_k127_9025422_6 Domain of unknown function (DUF2703) - - - 0.0000000000000000000001161 105.0
CH3_k127_9034552_0 Type II secretion system (T2SS), protein E, N-terminal domain K02454,K12276 - - 8.977e-302 932.0
CH3_k127_9034552_1 Acts as a magnesium transporter K06213 - - 5.677e-220 691.0
CH3_k127_9034552_10 general secretion pathway protein - - - 0.0000000000000000000000000000000008697 139.0
CH3_k127_9034552_11 - - - - 0.00000000000000000002118 93.0
CH3_k127_9034552_12 Prokaryotic N-terminal methylation motif K10924 - - 0.000000000000000003419 85.0
CH3_k127_9034552_13 Cytochrome D1 heme domain - - - 0.0007365 43.0
CH3_k127_9034552_2 Type II secretion system K02455,K12278 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007551 589.0
CH3_k127_9034552_3 Oxidoreductase molybdopterin binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007277 459.0
CH3_k127_9034552_4 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814 - 2.4.1.129 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002126 392.0
CH3_k127_9034552_5 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 GO:0000003,GO:0003006,GO:0003674,GO:0003824,GO:0004764,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0007275,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009790,GO:0009791,GO:0009793,GO:0009987,GO:0010154,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019632,GO:0019752,GO:0022414,GO:0032501,GO:0032502,GO:0032787,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046394,GO:0046417,GO:0048316,GO:0048608,GO:0048731,GO:0048856,GO:0055114,GO:0061458,GO:0071704,GO:1901576,GO:1901615 1.1.1.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000004501 263.0
CH3_k127_9034552_6 Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain K17247 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002338 255.0
CH3_k127_9034552_7 Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide K03216 - 2.1.1.207 0.0000000000000000000000000000000000000000000000000000000000000000004669 231.0
CH3_k127_9034552_8 23S rRNA-intervening sequence protein - - - 0.00000000000000000000000000000000000000001983 156.0
CH3_k127_9034552_9 polyketide cyclase - - - 0.0000000000000000000000000000000000000008231 152.0
CH3_k127_9072467_0 TIGRFAM ATP-dependent helicase HrpA K03578 - 3.6.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007665 446.0
CH3_k127_9072467_1 PAS domain containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002033 268.0
CH3_k127_9072467_2 DsrC like protein K11179 - - 0.00000000000000000000000000000000000000000000001001 172.0
CH3_k127_9072467_3 TIGRFAM HAD-superfamily hydrolase, subfamily IB (PSPase-like) - - - 0.0000000000000000000000000000000000001464 141.0
CH3_k127_9081148_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000988 564.0
CH3_k127_9081148_1 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001021 544.0
CH3_k127_9081148_2 peptidase K08259 - 3.4.24.75 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005329 340.0
CH3_k127_9081148_3 Protein of unknown function (DUF721) - - - 0.0000000000000002613 84.0
CH3_k127_90896_0 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001473 382.0
CH3_k127_90896_1 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005162 310.0
CH3_k127_90896_2 Belongs to the CDS family K00981 - 2.7.7.41 0.000000000000000000000000000000000000000000000000000000000000000001111 240.0
CH3_k127_90896_3 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.0000000000000000000000003163 105.0
CH3_k127_90896_4 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 0.000000000002485 68.0
CH3_k127_9104260_0 Protein of unknown function (DUF3485) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005152 525.0
CH3_k127_9104260_1 PFAM Glycosyl transferase, group 1 K00786 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003772 493.0
CH3_k127_9104260_2 PFAM Glycosyl transferase, group 1 - - - 0.000000000000000000000000001505 113.0
CH3_k127_9104260_3 Acetyltransferase (GNAT) domain - - - 0.00000000000001271 73.0
CH3_k127_9119987_0 Cobyrinic acid ac-diamide synthase K03496 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001859 321.0
CH3_k127_9119987_1 Protein of unknown function (DUF3579) - - - 0.000000000000000000000000000000000001307 141.0
CH3_k127_9154042_0 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 9.844e-243 758.0
CH3_k127_9154042_1 Belongs to the GPI family K01810 GO:0003674,GO:0003824,GO:0004347,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0033554,GO:0034404,GO:0034599,GO:0034641,GO:0034654,GO:0034655,GO:0042221,GO:0042802,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0050896,GO:0051186,GO:0051188,GO:0051716,GO:0055086,GO:0070887,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576 5.3.1.9 5.355e-225 702.0
CH3_k127_9154042_2 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 - 2.4.1.21 6.606e-199 631.0
CH3_k127_9154042_3 6-phosphogluconate dehydrogenase, C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002232 439.0
CH3_k127_9154042_4 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase K01057 - 3.1.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000009412 263.0
CH3_k127_9154042_5 GDSL-like Lipase/Acylhydrolase family K01073 - 3.1.2.20 0.00000000000000000000000000000000000001711 148.0
CH3_k127_9155983_0 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 4.429e-243 756.0
CH3_k127_9155983_1 GGDEF domain - - - 1.625e-202 652.0
CH3_k127_9155983_10 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03469 - 3.1.26.4 0.0000000000000000000000000000000000000000000000000000000000000000000003728 246.0
CH3_k127_9155983_11 transport system periplasmic component K01989 - - 0.000000000000000000000000000000000000000000000000000000000000000002569 237.0
CH3_k127_9155983_12 Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K03269 - 3.6.1.54 0.0000000000000000000004606 97.0
CH3_k127_9155983_13 - - - - 0.000000000004133 66.0
CH3_k127_9155983_14 - - - - 0.0000000002762 61.0
CH3_k127_9155983_15 - - - - 0.000000001093 60.0
CH3_k127_9155983_16 Belongs to the 'phage' integrase family - - - 0.00001506 47.0
CH3_k127_9155983_2 transglycosylase K08307 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004568 548.0
CH3_k127_9155983_3 TonB-dependent receptor K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001367 498.0
CH3_k127_9155983_4 Nucleotidyl transferase AbiEii toxin, Type IV TA system - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004136 345.0
CH3_k127_9155983_5 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid K01069 - 3.1.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001706 336.0
CH3_k127_9155983_6 PFAM Methyltransferase type 11 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001698 332.0
CH3_k127_9155983_7 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease K02342 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001177 312.0
CH3_k127_9155983_8 VacJ family lipoprotein K04754 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001191 300.0
CH3_k127_9155983_9 Transcriptional regulator, AbiEi antitoxin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003213 272.0
CH3_k127_9163432_0 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004292 558.0
CH3_k127_9163432_1 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000746 529.0
CH3_k127_9163432_2 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 - 2.1.1.297 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001158 309.0
CH3_k127_9163801_0 Bacterial transglutaminase-like cysteine proteinase BTLCP - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003678 246.0
CH3_k127_9163801_1 signal transduction protein containing a membrane domain an EAL and a GGDEF domain - - - 0.00000000000000000000000000000000000001977 147.0
CH3_k127_9163801_2 type I secretion outer membrane protein, TolC family K12543 - - 0.000000000000002603 78.0
CH3_k127_9269837_1 Protein involved in outer membrane biogenesis - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007889 365.0
CH3_k127_9269837_2 PFAM aminotransferase class I and II K00812 - 2.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000001124 250.0
CH3_k127_9269837_3 Glutathione S-transferase, N-terminal domain K00799 - 2.5.1.18 0.000000000000000000000000000000000000000000000000000000001885 209.0
CH3_k127_9269837_4 WHG domain - - - 0.000000000000000000000000000000000000000000004175 170.0
CH3_k127_9271281_0 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000914 304.0
CH3_k127_9271281_1 Chromate resistance exported protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003034 257.0
CH3_k127_9271281_2 Belongs to the ABC transporter superfamily K02010 - 3.6.3.30 0.0000000000000000000000000000000000000000000000000000000000000000007371 231.0
CH3_k127_9271281_3 Tryptophan-rich sensory protein K05770 - - 0.0000000000000000000000000000000000000000000000000000000000002911 215.0
CH3_k127_9271281_4 Protein of unknown function (DUF559) - - - 0.00000000000000000000000000000000000007659 145.0
CH3_k127_9271281_5 Rhodanese domain protein - - - 0.0000000000000008574 77.0
CH3_k127_9287678_0 Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744 - - 2.529e-226 722.0
CH3_k127_9287678_1 peptidase M24B, X-Pro dipeptidase aminopeptidase K01262 - 3.4.11.9 1.361e-213 669.0
CH3_k127_9287678_2 Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation K03771 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005052 545.0
CH3_k127_9287678_3 Phosphotransferase enzyme family K07102 - 2.7.1.221 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000373 496.0
CH3_k127_9287678_4 TIGRFAM Ubiquinone biosynthesis hydroxylase, UbiH UbiF VisC COQ6 K03185 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007753 476.0
CH3_k127_9287678_5 Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) K00097 - 1.1.1.262 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005131 447.0
CH3_k127_9287678_6 TIGRFAM Ubiquinone biosynthesis hydroxylase, UbiH UbiF VisC COQ6 K03185 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007494 387.0
CH3_k127_9287678_7 PFAM Nucleotidyl transferase K00992 - 2.7.7.99 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001307 302.0
CH3_k127_9287678_8 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process K03981 - 5.3.4.1 0.00000000000000000000000000000000000000000000002201 174.0
CH3_k127_9296817_0 PFAM sodium calcium exchanger membrane region K07301 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001295 503.0
CH3_k127_9296817_1 N-acetylmuramoyl-L-alanine amidase (Family 2) K03806 GO:0000270,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0006022,GO:0006026,GO:0006027,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0008745,GO:0009056,GO:0009057,GO:0009253,GO:0009254,GO:0009392,GO:0016020,GO:0016787,GO:0016810,GO:0016811,GO:0019867,GO:0030203,GO:0043167,GO:0043169,GO:0043170,GO:0046872,GO:0046914,GO:0061783,GO:0071704,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575 3.5.1.28 0.000000000000000000000000000000000000000000000000000000000000000855 221.0
CH3_k127_9296817_2 TonB-dependent Receptor Plug K02014 - - 0.0000000000000000000000000000000000000000000000009869 180.0
CH3_k127_9296817_3 COG0526 Thiol-disulfide isomerase and thioredoxins - - - 0.000000000000000000000000002273 115.0
CH3_k127_9482190_0 von Willebrand factor, type A - - - 0.0 1417.0
CH3_k127_9482190_1 - - - - 0.0000000000000000000000000000000000000000000000000006541 184.0
CH3_k127_9482190_2 CbbQ/NirQ/NorQ C-terminal - - - 0.0000000000000000000002519 96.0
CH3_k127_949615_0 Penicillin-binding Protein K05366 - 2.4.1.129,3.4.16.4 0.0 1091.0
CH3_k127_949615_1 Histidine kinase - - - 9.284e-219 698.0
CH3_k127_949615_10 type IV pilus secretin PilQ K02666 - - 0.0000000000000003219 81.0
CH3_k127_949615_2 Sigma-54 interaction domain - - - 1.017e-207 653.0
CH3_k127_949615_3 COG0457 FOG TPR repeat - - - 5.352e-207 673.0
CH3_k127_949615_4 Sugar transferase K21303 - 2.7.8.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006335 606.0
CH3_k127_949615_5 Type IV pilus assembly protein PilM K02662 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003371 567.0
CH3_k127_949615_6 Pilus assembly protein, PilO K02664 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004115 284.0
CH3_k127_949615_7 Fimbrial assembly protein (PilN) K02663 - - 0.000000000000000000000000000000000000000000000000000000000000001461 223.0
CH3_k127_949615_8 Pilus assembly protein, PilP K02665 - - 0.0000000000000000000000000000000000000000000000000000000000003641 215.0
CH3_k127_949615_9 mRNA catabolic process - - - 0.000000000000000000000000000000000000000004341 162.0
CH3_k127_9526118_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1150.0
CH3_k127_9526118_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004186 267.0
CH3_k127_95266_0 Belongs to the 'phage' integrase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002353 478.0
CH3_k127_95266_1 Belongs to the 'phage' integrase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000112 415.0
CH3_k127_95266_2 Integrase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007044 273.0
CH3_k127_95266_3 IstB-like ATP binding protein - - - 0.00000000000000000302 85.0
CH3_k127_95266_4 viral genome integration into host DNA K04763 - - 0.0000000003406 62.0
CH3_k127_9526968_0 PFAM glycosyl transferase family 9 K02849 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001385 519.0
CH3_k127_9526968_1 TonB dependent receptor K02014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003107 327.0
CH3_k127_9526968_2 Glycosyl transferases group 1 K02844 - - 0.0000000003393 66.0
CH3_k127_9543128_0 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 6.374e-225 704.0
CH3_k127_9543128_1 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009208 557.0
CH3_k127_9543128_2 HflC and HflK could encode or regulate a protease K04088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009697 551.0
CH3_k127_9543128_3 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K17713 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002372 466.0
CH3_k127_9543128_4 protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000001513 173.0
CH3_k127_9543128_5 RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs K03666 - - 0.0000000000000000000000000000000000006169 141.0
CH3_k127_9587631_0 Belongs to the CarB family K01955 - 6.3.5.5 0.0 1510.0
CH3_k127_9587631_1 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009056,GO:0009057,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019538,GO:0030163,GO:0042623,GO:0042802,GO:0043170,GO:0044238,GO:0044464,GO:0070011,GO:0071704,GO:0071944,GO:0140096,GO:1901564,GO:1901565,GO:1901575 - 0.0 1124.0
CH3_k127_9587631_10 Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit K02427 - 2.1.1.166 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001605 284.0
CH3_k127_9587631_11 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007292 265.0
CH3_k127_9587631_12 Binds to the 23S rRNA K02939 - - 0.000000000000000000000000000000000000000000000000000000000000004026 220.0
CH3_k127_9587631_13 Binds together with S18 to 16S ribosomal RNA K02990 - - 0.0000000000000000000000000000000000000000000000000000000000007037 212.0
CH3_k127_9587631_14 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 0.000000000000000000000000000000000000000000000000000000000008015 209.0
CH3_k127_9587631_15 Domain of unknown function (DUF4149) - - - 0.0000000000000000000000000000000000000000000000000000012 195.0
CH3_k127_9587631_16 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 - - 0.0000000000000000000000000000000000003538 141.0
CH3_k127_9587631_17 rna-binding protein K07574 - - 0.000000000000000000000000000000000186 134.0
CH3_k127_9587631_18 Binds single-stranded DNA at the primosome assembly site (PAS) K02686 - - 0.0000000000000000000000133 102.0
CH3_k127_9587631_2 it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins K02314 - 3.6.4.12 2.482e-234 731.0
CH3_k127_9587631_3 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 7.128e-224 702.0
CH3_k127_9587631_4 Part of the ABC transporter complex PstSACB involved in phosphate import K02040 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008437 542.0
CH3_k127_9587631_5 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001498 469.0
CH3_k127_9587631_6 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003846 471.0
CH3_k127_9587631_7 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001341 467.0
CH3_k127_9587631_8 phosphate transport system permease K02038 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005637 463.0
CH3_k127_9587631_9 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 - 2.5.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003484 348.0
CH3_k127_9608032_0 Cytochrome c oxidase accessory protein ccog - - - 2.864e-240 750.0
CH3_k127_9608032_1 C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex K00406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003424 462.0
CH3_k127_9608032_2 PFAM cytochrome C oxidase mono-heme subunit FixO K00405 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001248 388.0
CH3_k127_9608032_3 Belongs to the heme-copper respiratory oxidase family K00404 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001503 373.0
CH3_k127_9608032_4 FixH - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003074 246.0
CH3_k127_9608032_5 Cbb3-type cytochrome oxidase component FixQ - - - 0.00000000000000000005198 90.0
CH3_k127_9608032_6 Putative metal-binding domain of cation transport ATPase K01533 - 3.6.3.4 0.00000000006931 63.0
CH3_k127_963222_0 Belongs to the ABC transporter superfamily K02031,K02032 - - 8.334e-215 678.0
CH3_k127_963222_1 PFAM Binding-protein-dependent transport system inner membrane component K13895 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003055 374.0
CH3_k127_963222_2 Sh3 type 3 domain protein - - - 0.000000000000000000000000025 108.0
CH3_k127_9673107_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001503 333.0
CH3_k127_9673107_1 Conserved hypothetical protein 95 K08316 - 2.1.1.171 0.00000000000000000000000000000000000000000000000000000000000000008332 226.0
CH3_k127_9673107_2 Single cache domain 3 K03406 - - 0.0000000000000000000000000000000000000000000000002752 185.0
CH3_k127_9673107_3 COG0226 ABC-type phosphate transport system, periplasmic component - - - 0.0000000000000000000001261 102.0
CH3_k127_9673107_4 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - 0.0000000003614 72.0
CH3_k127_9675075_0 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis K00560 - 2.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001335 471.0
CH3_k127_9675075_1 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002559 457.0
CH3_k127_9675075_2 Domain of unknown function (DUF3391) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005263 424.0
CH3_k127_9675075_3 Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine K00684 - 2.3.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002074 357.0
CH3_k127_9675075_4 May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate K21420 - 2.3.2.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000668 332.0
CH3_k127_9675075_5 Domain of unknown function DUF302 - - - 0.000000003358 58.0
CH3_k127_9675075_6 - - - - 0.00009255 51.0
CH3_k127_9692782_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 5.711e-271 845.0
CH3_k127_9692782_1 PFAM H transporting two-sector ATPase alpha beta subunit central region K02412 - 3.6.3.14 4.119e-227 711.0
CH3_k127_9692782_10 Methyltransferase type 11 - - - 0.000000000000000000000000000000000000000000000000000000002466 204.0
CH3_k127_9692782_11 Flagellar assembly protein FliH K02411 - - 0.000000000000000000000000000000000000000000000001015 181.0
CH3_k127_9692782_12 Flagellar export protein FliJ K02413 - - 0.00000000000000000000000000000000000000004818 156.0
CH3_k127_9692782_13 Flagellar hook-length control protein K02414 - - 0.000000000000000000000000000000000000007829 160.0
CH3_k127_9692782_14 PFAM flagellar biosynthesis protein, FliO K02418 - - 0.00000000000000000000000000000000005128 139.0
CH3_k127_9692782_15 Controls the rotational direction of flagella during chemotaxis K02415 - - 0.000000000000000000000000000000002715 135.0
CH3_k127_9692782_16 Role in flagellar biosynthesis K02420 - - 0.0000000000000000000000000000000538 126.0
CH3_k127_9692782_17 Flagellar hook-basal body complex protein FliE K02408 - - 0.000000000000000000000000000003371 123.0
CH3_k127_9692782_18 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.00000136 50.0
CH3_k127_9692782_2 The M ring may be actively involved in energy transduction K02409 - - 1.152e-223 704.0
CH3_k127_9692782_3 response regulator K10943 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008926 604.0
CH3_k127_9692782_4 Flagellar motor switch protein K02416 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003596 527.0
CH3_k127_9692782_5 flagellar motor switch protein flig K02410 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003537 449.0
CH3_k127_9692782_6 Plays a role in the flagellum-specific transport system K02419 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002671 361.0
CH3_k127_9692782_7 Flagellar biosynthetic protein FliR K02421 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001864 325.0
CH3_k127_9692782_8 signal transduction histidine kinase K10942 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001134 314.0
CH3_k127_9692782_9 Flagellar motor switch protein flin K02417,K03225 - - 0.000000000000000000000000000000000000000000000000000000001391 204.0
CH3_k127_9703301_0 SmpB protein K03664 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004741 261.0
CH3_k127_9703301_1 Polyketide cyclase / dehydrase and lipid transport - - - 0.000000000000000000000000000000000000000000000000000000000000454 213.0
CH3_k127_9703301_2 Belongs to the UPF0125 (RnfH) family K09801 - - 0.00000000000000000000000000000002401 131.0
CH3_k127_9703301_3 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.000000000000000000008221 93.0
CH3_k127_9703301_4 - K06078 - - 0.0000000000000001511 83.0
CH3_k127_9703301_5 - - - - 0.0000002232 55.0
CH3_k127_9716345_0 Glycine zipper - - - 0.00000000000000000000000000000000000000000000000000001437 197.0
CH3_k127_9716345_1 - - - - 0.000000000000000000000000000000000000000000000004119 175.0
CH3_k127_9716345_2 polyhydroxyalkanoic acid - - - 0.00000000000001318 77.0
CH3_k127_9716345_3 Putative polyhydroxyalkanoic acid system protein (PHA_gran_rgn) - - - 0.0000000002232 65.0
CH3_k127_9716345_4 - - - - 0.000001563 54.0
CH3_k127_9716636_0 cysteine protease - - - 9.155e-230 735.0
CH3_k127_9716636_1 Belongs to the heme-copper respiratory oxidase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005496 436.0
CH3_k127_9716636_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001373 298.0
CH3_k127_9716636_3 Hemerythrin HHE cation binding domain - - - 0.000000000000000000000000000000000000002049 152.0
CH3_k127_9716636_4 TIGRFAM sulfur relay protein, TusE DsrC DsvC family K11179 - - 0.000000000000000000000001372 105.0
CH3_k127_9716636_5 Uncharacterized conserved protein (DUF2249) - - - 0.000000000000000000002283 98.0
CH3_k127_9759602_0 Flavin-binding monooxygenase-like K03379 - 1.14.13.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004434 553.0
CH3_k127_9799923_0 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001219 453.0
CH3_k127_9799923_1 Anthranilate synthase K01657 - 4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003694 439.0
CH3_k127_9799923_2 TatD related DNase K03424 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000662 391.0
CH3_k127_9799923_3 dna polymerase iii K02341 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004678 353.0
CH3_k127_9799923_4 PFAM Aminotransferase, class IV K02619 - 4.1.3.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000804 315.0
CH3_k127_9799923_5 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 - 2.7.4.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000009281 263.0
CH3_k127_9799923_6 PilZ domain K02676 - - 0.00000000000000000000000000000000000000000000000000007396 188.0
CH3_k127_9799923_7 Beta-lactamase superfamily domain K06167 - 3.1.4.55 0.0000000000000000104 83.0
CH3_k127_9842966_0 Protein of unknown function (DUF1631) - - - 0.0 1229.0
CH3_k127_9842966_1 Abc transporter K15738 - - 3.797e-276 861.0
CH3_k127_9842966_2 'signal transduction protein - - - 6.803e-251 779.0
CH3_k127_9842966_3 alcohol dehydrogenase K00001 - 1.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001312 483.0
CH3_k127_9842966_4 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001679 318.0
CH3_k127_9842966_5 LemA Family K03744 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001229 263.0
CH3_k127_9891414_0 PFAM Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000103 539.0
CH3_k127_9891414_1 FtsX-like permease family K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008401 515.0
CH3_k127_9891414_2 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001106 446.0
CH3_k127_9891414_3 DNA polymerase III is a complex multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3 to 5 exonuclease activity K02343 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003076 339.0
CH3_k127_9891414_4 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002191 253.0
CH3_k127_9891414_5 - - - - 0.00000000000000000000000000002944 120.0
CH3_k127_9973784_0 Molecular chaperone. Has ATPase activity K04079 - - 3.779e-241 750.0
CH3_k127_9973784_1 ATPase family associated with various cellular activities (AAA) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001387 452.0
CH3_k127_9973784_2 NUDIX hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003232 276.0
CH3_k127_9973784_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001285 274.0
CH3_k127_9991280_0 Belongs to the aconitase IPM isomerase family K01682 - 4.2.1.3,4.2.1.99 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003456 451.0
CH3_k127_9991280_1 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007411 397.0
CH3_k127_9991280_2 Glutathione S-transferase K00799 - 2.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002913 289.0
CH3_k127_9991280_3 PIN domain - - - 0.0000000000000000000000000000000000001137 145.0
CH3_k127_9991280_4 SpoVT / AbrB like domain - - - 0.00000000000000000001221 94.0
CH3_k127_9996808_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000377 474.0
CH3_k127_9996808_1 oxidoreductase FAD NAD(P)-binding domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000126 439.0
CH3_k127_9996808_2 UPF0761 membrane protein K07058 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001164 397.0
CH3_k127_9996808_3 membrane - - - 0.000000000000000000000000000000000001097 142.0
CH3_k127_9996808_4 TIGRFAM type I secretion membrane fusion protein, HlyD family K02022 - - 0.000104 48.0