Overview

ID MAG00290
Name CMS1_bin.1
Sample SMP0010
Taxonomy
Kingdom Archaea
Phylum Thermoproteota
Class Bathyarchaeia
Order Bathyarchaeales
Family Bathycorpusculaceae
Genus Bathycorpusculum
Species
Assembly information
Completeness (%) 68.43
Contamination (%) 2.67
GC content (%) 41.0
N50 (bp) 5,948
Genome size (bp) 1,253,891

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes1163

Gene name Description KEGG GOs EC E-value Score Sequence
CMS1_k127_1018869_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1084.0
CMS1_k127_1018869_1 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 3.439e-250 788.0
CMS1_k127_102738_0 RIO-like serine threonine protein kinase fused to N-terminal HTH domain K07179 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000001617 258.0
CMS1_k127_102738_1 Component of LSm protein complexes, which are involved in RNA processing and may function in a chaperone-like manner, facilitating the efficient association of RNA processing factors with their substrates. Component of the cytoplasmic LSM1-LSM7 complex, which is thought to be involved in mRNA degradation by activating the decapping step in the 5'-to-3' mRNA decay pathway. Component of the nuclear LSM2-LSM8 complex, which is involved in splicing of nuclear mRNAs. LSM2-LSM8 associates with multiple snRNP complexes containing the U6 snRNA (U4 U6 di-snRNP, spliceosomal U4 U6.U5 tri-snRNP, and free U6 snRNP). It binds directly to the 3'-terminal U-tract of U6 snRNA and plays a role in the biogenesis and stability of the U6 snRNP and U4 U6 snRNP complexes. LSM2-LSM8 probably also is involved degradation of nuclear pre-mRNA by targeting them for decapping, and in processing of pre-tRNAs, pre-rRNAs and U3 snoRNA (By similarity) K12625 GO:0000375,GO:0000377,GO:0000398,GO:0000932,GO:0003674,GO:0003676,GO:0003723,GO:0003727,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005688,GO:0005730,GO:0005732,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008187,GO:0008266,GO:0008380,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016072,GO:0022613,GO:0030490,GO:0030532,GO:0031974,GO:0031981,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0035770,GO:0036464,GO:0042254,GO:0042274,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0045292,GO:0046483,GO:0046540,GO:0070013,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0097525,GO:0097526,GO:0120114,GO:0120115,GO:1901360,GO:1901363,GO:1990726,GO:1990904 - 0.0000000007819 62.0
CMS1_k127_1049711_0 Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA K00784 - 3.1.26.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001867 276.0
CMS1_k127_1049711_1 RNA methylase - GO:0003674,GO:0003824,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0016278,GO:0016279,GO:0016740,GO:0016741,GO:0018022,GO:0018193,GO:0018205,GO:0019538,GO:0032259,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:0140096,GO:1901564 - 0.0000000000000000000000000000000000000000000115 166.0
CMS1_k127_1049711_2 PFAM Xylose isomerase domain protein TIM barrel - - - 0.0000000000000000000000000000002444 135.0
CMS1_k127_1049711_3 Fe-S-cluster oxidoreductase K06940 - - 0.0000000000000000000000002057 112.0
CMS1_k127_1056281_0 Heterodisulfide reductase subunit A and related polyferredoxins K03388,K16886 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 2.829e-199 638.0
CMS1_k127_1056281_1 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.000000000000000000000000000000000000000000000000000000000211 214.0
CMS1_k127_1056281_2 Flavodoxin - - - 0.000004978 53.0
CMS1_k127_1077275_0 PFAM Glycosyl transferase family 2 K07027 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000206 269.0
CMS1_k127_1077275_1 Belongs to the eIF-2B alpha beta delta subunits family K18237 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0019509,GO:0019752,GO:0043094,GO:0043102,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046523,GO:0071265,GO:0071267,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.29 0.00000000000000000000000000000000000000000000000000000000000000006304 233.0
CMS1_k127_1077275_2 Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate K01807 - 5.3.1.6 0.00000000000000000000000000000000000000000000000000000000001756 214.0
CMS1_k127_1077275_3 GH3 auxin-responsive promoter - - - 0.00000000000000000002013 104.0
CMS1_k127_1077275_4 TM2 domain containing protein - - - 0.0000718 50.0
CMS1_k127_1092485_0 PFAM Thiolase K00626 - 2.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001852 378.0
CMS1_k127_1092485_1 PFAM Aminotransferase class I and II K04720 - 4.1.1.81 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001922 278.0
CMS1_k127_1092485_2 Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group K02227 - 6.3.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000001377 256.0
CMS1_k127_1092485_3 S-adenosyl-L-methionine-dependent methyltransferase that catalyzes the trimethylation of the amino group of the modified target histidine residue in translation elongation factor 2 (EF- 2), to form an intermediate called diphthine. The three successive methylation reactions represent the second step of diphthamide biosynthesis K20215 GO:0003674,GO:0003824,GO:0004164,GO:0006417,GO:0006448,GO:0006464,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0009056,GO:0009058,GO:0009109,GO:0009889,GO:0009987,GO:0010468,GO:0010556,GO:0010608,GO:0016740,GO:0016741,GO:0017144,GO:0017182,GO:0017183,GO:0018193,GO:0018202,GO:0019222,GO:0019538,GO:0031323,GO:0031326,GO:0032259,GO:0032268,GO:0034248,GO:0036211,GO:0042737,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044267,GO:0044273,GO:0046500,GO:0050789,GO:0050794,GO:0050843,GO:0051171,GO:0051186,GO:0051187,GO:0051246,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:1900247,GO:1901564,GO:1901575,GO:2000112,GO:2000765 2.1.1.98 0.00000000000000000000000000000000000000000000000000001415 196.0
CMS1_k127_1092485_4 Rubredoxin-like zinc ribbon domain (DUF35_N) K07068 - - 0.0000000000000000001826 93.0
CMS1_k127_1093764_0 PFAM glycosyl transferase, family 35 K00688 - 2.4.1.1 1.965e-251 786.0
CMS1_k127_1093764_1 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 - 6.3.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005303 356.0
CMS1_k127_1093764_2 Peptidase family M20/M25/M40 K01439 - 3.5.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001938 340.0
CMS1_k127_1093764_3 HMGL-like K01649 - 2.3.3.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000192 265.0
CMS1_k127_1093764_4 Trypsin-like serine protease with C-terminal PDZ domain - - - 0.00000000000000000000000000000000000000000000000000000204 205.0
CMS1_k127_1093764_5 retrograde transport, endosome to Golgi K07095 - - 0.0000000000000000000000000000004183 130.0
CMS1_k127_1093764_6 Putative zinc- or iron-chelating domain K06940 - - 0.000000000000000000000007394 106.0
CMS1_k127_1093764_7 PFAM regulatory protein AsnC Lrp family K03718 - - 0.000006472 55.0
CMS1_k127_1093764_8 Winged helix-turn-helix - - - 0.00002197 50.0
CMS1_k127_1093764_9 Transcriptional regulator K10947 - - 0.0000283 51.0
CMS1_k127_1115464_0 DNA polymerase beta domain protein region K09717 - - 0.000000000000000000000000000000000000000000004997 177.0
CMS1_k127_1115464_1 ATP:dephospho-CoA triphosphoribosyl transferase K05966 - 2.4.2.52 0.0000000000000000001469 97.0
CMS1_k127_1282007_0 TIGRFAM lysine 2,3-aminomutase YodO family protein K01843 - 5.4.3.2 1.22e-207 653.0
CMS1_k127_1282007_1 PFAM Glycosyl transferase family 2 K00786 - - 0.000000000000000000000000000000000000000000000000009517 194.0
CMS1_k127_1282007_2 acetyltransferase K06718 GO:0003674,GO:0003824,GO:0006082,GO:0006464,GO:0006473,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016053,GO:0016407,GO:0016740,GO:0016746,GO:0016747,GO:0018130,GO:0019491,GO:0019538,GO:0019752,GO:0032787,GO:0036211,GO:0042399,GO:0043170,GO:0043412,GO:0043436,GO:0043543,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.3.1.178 0.0000000000000000000000000001369 121.0
CMS1_k127_1284437_0 GTPase of K06942 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009595 435.0
CMS1_k127_1284437_1 Glycosyl Transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005266 342.0
CMS1_k127_1284437_2 Catalyzes the sequential condensation of isopentenyl diphosphate (IPP) with geranylgeranyl diphosphate (GGPP) to yield (2Z,6Z,10Z,14Z,18Z,22Z,26Z,30E,34E,38E)-undecaprenyl diphosphate (tritrans,heptacis-UPP). It is probably the precursor of glycosyl carrier lipids K15888 - 2.5.1.89 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001963 278.0
CMS1_k127_1284437_3 Domain of unknown function (DUF373) K08975 - - 0.000000000000000000000000000000000000000000000001051 190.0
CMS1_k127_1284437_4 eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA K03238 - - 0.000000000000000000000000000000000007378 141.0
CMS1_k127_1284437_5 Protein of unknown function (DUF424) K09148 - - 0.000000000000000000008414 95.0
CMS1_k127_1284437_6 archaeal coiled-coil protein - - - 0.000000000004966 77.0
CMS1_k127_1284437_7 membrane-associated protein domain - - - 0.0002339 51.0
CMS1_k127_1289942_0 Translation initiation factor 2 K03237 GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000001534 212.0
CMS1_k127_1289942_1 Sliding clamp subunit that acts as a moving platform for DNA processing. Responsible for tethering the catalytic subunit of DNA polymerase and other proteins to DNA during high-speed replication K04802 - - 0.0000000000000000000000000000000000000000000000001487 185.0
CMS1_k127_1289942_2 Regulatory subunit of DNA primase, an RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Stabilizes and modulates the activity of the small subunit, increasing the rate of DNA synthesis, and conferring RNA synthesis capability. The DNA polymerase activity may enable DNA primase to also catalyze primer extension after primer synthesis. May also play a role in DNA repair K18882 - - 0.000000000000000000000000000000000000000000000004467 186.0
CMS1_k127_1289942_3 PFAM Glycosyl transferase family 2 K00721 - 2.4.1.83 0.0000000000000000000000000000000000000000000001694 177.0
CMS1_k127_1289942_4 binds to the 23S rRNA K02929 - - 0.0000000000000000000000000006991 115.0
CMS1_k127_1289942_5 PAC2 family K07159 - - 0.0000000000000000000002067 100.0
CMS1_k127_1289942_6 PFAM ribosomal protein K02978 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000003914 79.0
CMS1_k127_1289942_7 Nucleolar RNA-binding protein, Nop10p family K11130 - - 0.0000001862 54.0
CMS1_k127_1290566_0 KaiC - - - 0.0000000000000000000000000000000000000003644 158.0
CMS1_k127_1290566_1 Catalyzes the reversible interconversion of 5-formyl- H(4)MPT to methenyl-H(4)MPT( K01499 - 3.5.4.27 0.0000000000002782 72.0
CMS1_k127_1290566_2 COG0467 RecA-superfamily ATPases implicated in signal transduction K08482 - - 0.00005115 53.0
CMS1_k127_1290566_3 PAXNEB protein - - - 0.0001334 53.0
CMS1_k127_1311587_0 Stabilizes TBP binding to an archaeal box-A promoter. Also responsible for recruiting RNA polymerase II to the pre- initiation complex (DNA-TBP-TFIIB) K03124 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001212 336.0
CMS1_k127_1311587_1 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions K01507 - 3.6.1.1 0.000000000000000000000000000000000000000006324 160.0
CMS1_k127_1311587_2 PFAM Glycosyl transferase family 2 K00721 - 2.4.1.83 0.0000000000000000000000000000000002122 141.0
CMS1_k127_1311587_3 aldo keto reductase K07079 - - 0.000000000000000000003071 97.0
CMS1_k127_1311587_4 RNA polymerase subunit 9 K03057 - - 0.000000000000000000843 90.0
CMS1_k127_1346505_0 Highly conserved protein containing a thioredoxin domain K06888 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001818 345.0
CMS1_k127_1346505_1 transcriptional - - - 0.000000000000000000000000000426 116.0
CMS1_k127_1346505_2 - - - - 0.00006409 51.0
CMS1_k127_1376478_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 7.263e-201 639.0
CMS1_k127_1376478_1 PFAM regulatory protein AsnC Lrp family - - - 0.00000000000000002447 83.0
CMS1_k127_1376478_2 PFAM CBS domain containing protein - - - 0.000000000000004839 80.0
CMS1_k127_1376478_3 integral membrane protein K07027 - - 0.000002167 58.0
CMS1_k127_1483985_0 Metal dependent phosphohydrolases with conserved 'HD' motif. K06885 - - 0.000000000000000000000000000000000000000000000000000000000000000000489 237.0
CMS1_k127_1483985_1 ABC-type multidrug transport system, ATPase component K01990 - - 0.00000000000000000000000000000000000000000000007952 177.0
CMS1_k127_1483985_2 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000000000000000000000585 174.0
CMS1_k127_1483985_3 thymidylate kinase K00943 GO:0003674,GO:0003824,GO:0004798,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009165,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.4.9 0.0000000000000000000000000000000000000002896 156.0
CMS1_k127_1492361_0 General factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Binds specifically to the TATA box promoter element which lies close to the position of transcription initiation K03120 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004851 250.0
CMS1_k127_1492361_1 DEAD DEAH box helicase domain protein K03724 - - 0.0000000000000000000000000000000000000000000000000001243 190.0
CMS1_k127_1492361_2 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.00000000000000000000000000000000000000000008262 167.0
CMS1_k127_1492361_3 Domain of unknown function (DUF2088) - - - 0.0000000000000000000000000000000000008692 145.0
CMS1_k127_1492361_4 Beta-lactamase superfamily domain - - - 0.00000000007994 72.0
CMS1_k127_1492361_5 Signal peptidase I K13280 - 3.4.21.89 0.00000051 59.0
CMS1_k127_1492361_6 - - - - 0.0000007448 53.0
CMS1_k127_1511629_0 ABC-type cobalt transport system ATPase component K16787 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000024 287.0
CMS1_k127_1511629_1 ATP-binding protein K16786 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003241 264.0
CMS1_k127_1511629_2 PFAM Xylose isomerase domain protein TIM barrel K01151 - 3.1.21.2 0.00000000000000000000000000000000000000000000000000000000000000000004166 241.0
CMS1_k127_1511629_3 SMART DNA-directed DNA polymerase B K02319 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000008542 190.0
CMS1_k127_1511629_4 PFAM phosphoesterase, RecJ domain protein - - - 0.0000000000000000000000000000000000005557 152.0
CMS1_k127_1511629_5 PFAM Cobalt transport protein K16785 - - 0.000000000000000000000000000000004321 138.0
CMS1_k127_1511629_6 Molecular chaperone capable of stabilizing a range of proteins. Seems to fulfill an ATP-independent, HSP70-like function in archaeal de novo protein folding K04798 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006457,GO:0006996,GO:0007010,GO:0008150,GO:0009987,GO:0016043,GO:0044424,GO:0044464,GO:0071840 - 0.000000000000001385 83.0
CMS1_k127_1511629_7 Protein of unknown function (DUF3194) - - - 0.00001732 52.0
CMS1_k127_1520560_0 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 2 subfamily K01889 GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003706 395.0
CMS1_k127_1520560_1 Catalyzes the reversible interconversion of 5-formyl- H(4)MPT to methenyl-H(4)MPT( K01499 - 3.5.4.27 0.0000000000000000000000000000000000000000000000000000000000000000000000001585 259.0
CMS1_k127_1520560_2 Phenylalanyl-tRNA synthetase beta subunit K01890 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 0.00000000000000000000000000000000000000000000003233 177.0
CMS1_k127_1556741_0 SMART Elongator protein 3 MiaB NifB - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004343 319.0
CMS1_k127_1556741_1 Asparagine synthase K01953 - 6.3.5.4 0.000000000000000000000000000000000000000000000889 179.0
CMS1_k127_1556741_2 Beta-galactosidase - - - 0.0000000000000000000000000000000000816 145.0
CMS1_k127_1556741_3 Beta-galactosidase - - - 0.00000000000000000000000000000000008404 145.0
CMS1_k127_1556741_4 Belongs to the peptidase M48B family K03799 - - 0.000000000000000000000000000000002177 139.0
CMS1_k127_1556741_5 Adenosylcobinamide amidohydrolase K02231 - 2.7.1.156,2.7.7.62 0.00000000000000000007915 101.0
CMS1_k127_1556741_6 Carbon-nitrogen hydrolase K13566 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006107,GO:0006108,GO:0008150,GO:0008152,GO:0008270,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009987,GO:0016787,GO:0016810,GO:0016811,GO:0019752,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043648,GO:0044237,GO:0044281,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046872,GO:0046914,GO:0050152,GO:0071704 3.5.1.3 0.000000000000000000117 99.0
CMS1_k127_1556741_7 TIGRFAM pyruvate ferredoxin flavodoxin oxidoreductase, delta subunit K00171 - 1.2.7.1 0.00000006154 56.0
CMS1_k127_1557411_0 TIGRFAM lysine 2,3-aminomutase YodO family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001913 460.0
CMS1_k127_1557411_1 O-methyltransferase - - - 0.00000000000000000000000000000000000000000001747 165.0
CMS1_k127_1557411_2 RNA polymerase subunit 9 K03057 - - 0.0000000000000000001713 92.0
CMS1_k127_1562826_0 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 GO:0003674,GO:0003824,GO:0004478,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016740,GO:0016765,GO:0044424,GO:0044444,GO:0044464 2.5.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002853 482.0
CMS1_k127_1562826_1 Conserved hypothetical ATP binding protein K06883 - - 0.000000000000000000000000000000000000000000000000000000000000003567 225.0
CMS1_k127_1562826_2 PFAM Radical SAM domain protein K22227 - - 0.0000000000000000000000000000000000000000000000002449 190.0
CMS1_k127_1562826_3 coenzyme F420 hydrogenase dehydrogenase beta subunit domain protein K00441 GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0016491,GO:0016725,GO:0052592,GO:0055114 1.12.98.1 0.000000000000000000000000000003499 139.0
CMS1_k127_1562826_4 Domain of unknown function (DUF4443) - - - 0.000000000000000000001905 102.0
CMS1_k127_1562826_5 Part of a membrane complex involved in electron transport K03614 - - 0.00000000000000000000766 108.0
CMS1_k127_1562826_6 - - - - 0.0000000009404 66.0
CMS1_k127_1580633_0 Belongs to the MCM family K10726 GO:0003674,GO:0005488,GO:0005515,GO:0042802 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002953 557.0
CMS1_k127_1580633_1 Belongs to the Glu Leu Phe Val dehydrogenases family K00261,K00262 - 1.4.1.3,1.4.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007316 452.0
CMS1_k127_1580633_2 Part of the RFC clamp loader complex which loads the PCNA sliding clamp onto DNA K04801 GO:0005575,GO:0005622,GO:0005623,GO:0005657,GO:0005663,GO:0005694,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044422,GO:0044424,GO:0044427,GO:0044446,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:1901360,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003455 316.0
CMS1_k127_1580633_3 Part of the RFC clamp loader complex which loads the PCNA sliding clamp onto DNA K04800 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003507 261.0
CMS1_k127_1580633_4 UDP-N-acetylglucosamine 2-epimerase K01791 - 5.1.3.14 0.0000000000000000000000000000000000000000000000000000000001779 208.0
CMS1_k127_1580633_5 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.10 0.00000000000000000000000000002589 120.0
CMS1_k127_1580633_6 PFAM Translin K07477 - - 0.0000000000000000000000000004573 122.0
CMS1_k127_1580633_7 GINS complex protein K09723 - - 0.0004568 49.0
CMS1_k127_1611761_0 SMART Elongator protein 3 MiaB NifB K22227 - - 0.0000000000000000000002582 111.0
CMS1_k127_1691092_0 MOFRL family K11529 - 2.7.1.165 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004241 418.0
CMS1_k127_1691092_1 PFAM S-adenosyl-l-methionine hydroxide adenosyltransferase K22205 - - 0.000000000000000000000000000000000000000000000000000006505 194.0
CMS1_k127_1691092_2 TIGRFAM MoaD family protein K03636 - - 0.0000005356 55.0
CMS1_k127_1747498_0 Transcriptional regulator K03524 - 6.3.4.15 0.000000000000000000000000000000001038 139.0
CMS1_k127_1747498_1 - - - - 0.000000000000000000000003003 111.0
CMS1_k127_1747498_2 Acid phosphatase homologues K19302 - 3.6.1.27 0.00000000000000000004897 98.0
CMS1_k127_1747498_3 - - - - 0.00000000000006612 76.0
CMS1_k127_1747498_4 - - - - 0.000000001047 66.0
CMS1_k127_1747498_5 PFAM regulatory protein AsnC Lrp family - - - 0.00000002687 58.0
CMS1_k127_1795619_0 - - - - 0.00000000000000000000000000000000000000000000000000006534 197.0
CMS1_k127_1795619_1 lipolytic protein G-D-S-L family K00077 - 1.1.1.169 0.000000000000000000000000000000000000001083 153.0
CMS1_k127_1795619_2 lipolytic protein G-D-S-L family K00077 - 1.1.1.169 0.0000000000000000000000000000000000001984 149.0
CMS1_k127_1795619_3 Acyltransferase family - - - 0.000000000000000000000000000001385 134.0
CMS1_k127_179707_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 GO:0000049,GO:0002161,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006450,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016787,GO:0016788,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0097159,GO:0106074,GO:0140098,GO:0140101,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.1.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000822 619.0
CMS1_k127_183146_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 5.584e-256 818.0
CMS1_k127_183146_1 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K03234 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 9.695e-223 711.0
CMS1_k127_1850178_0 PFAM Uroporphyrin-III C tetrapyrrole (Corrin Porphyrin) methyltransferase K05936 - 2.1.1.133,2.1.1.271 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001394 313.0
CMS1_k127_1850178_1 Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A K02188 - 2.1.1.195 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003817 315.0
CMS1_k127_1850178_2 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001317 310.0
CMS1_k127_1850178_3 Cobyric acid synthase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003036 255.0
CMS1_k127_1850178_4 Cobalamin (Vitamin B12) biosynthesis CbiX protein K03794 - 4.99.1.4 0.000000000000000000000000000000000000000000000000000000003815 213.0
CMS1_k127_1850178_5 Catalyzes the methylation of C-15 in cobalt-precorrin-6B followed by the decarboxylation of C-12 to form cobalt-precorrin- 7 K02191 - 2.1.1.196 0.0000000000000000000000000000000000000000000000000001814 191.0
CMS1_k127_1850178_6 Precorrin-2 C20-methyltransferase K03394 - 2.1.1.130,2.1.1.151 0.00000000000000000000000000000000000000000000002188 180.0
CMS1_k127_1850178_7 Precorrin-6y C5,15-methyltransferase (Decarboxylating), CbiE subunit K03399 - 2.1.1.289 0.00000000000000000000000000000000000000000000005378 176.0
CMS1_k127_1850178_8 Cobalamin synthesis G C-terminus K02189 - 3.7.1.12 0.000000000000000000000000000000000000002203 159.0
CMS1_k127_1880617_0 Catalytic component of the exosome, which is a complex involved in RNA degradation. Has 3'- 5' exoribonuclease activity. Can also synthesize heteropolymeric RNA-tails K11600 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002683 321.0
CMS1_k127_1880617_1 Belongs to the UPF0284 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003186 304.0
CMS1_k127_1880617_10 diphthine-ammonia ligase activity K06927 - 6.3.1.14 0.00000000000000000000000000000000000000004018 160.0
CMS1_k127_1880617_11 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.000000000000000000000000000000000000005326 149.0
CMS1_k127_1880617_12 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000001232 156.0
CMS1_k127_1880617_13 COG0463 Glycosyltransferases involved in cell wall biogenesis - - - 0.0000000000000000000000000000000004365 140.0
CMS1_k127_1880617_14 PFAM Phosphatidylglycerophosphatase A - - - 0.00000000000000000000000000000006802 131.0
CMS1_k127_1880617_15 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000001188 128.0
CMS1_k127_1880617_16 PFAM glutamate synthase alpha subunit - - - 0.0000000000000000000000000189 111.0
CMS1_k127_1880617_17 Belongs to the eukaryotic ribosomal protein eL18 family K02883 - - 0.0000000000000000000000006071 108.0
CMS1_k127_1880617_18 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03058 GO:0000428,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0008270,GO:0030880,GO:0032991,GO:0043167,GO:0043169,GO:0044424,GO:0044464,GO:0046872,GO:0046914,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.0000000000000000000003416 99.0
CMS1_k127_1880617_19 binds to the 23S rRNA K02921 - - 0.0000000000000000000344 93.0
CMS1_k127_1880617_2 Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Contributes to the structuring of the Rrp41 active site K12589 GO:0000177,GO:0000178,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006401,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0016070,GO:0016072,GO:0016075,GO:0017091,GO:0019439,GO:0032991,GO:0034641,GO:0034655,GO:0034660,GO:0034661,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901575,GO:1902494,GO:1905354 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003987 295.0
CMS1_k127_1880617_20 Protein of unknown function (DUF1616) - - - 0.000000002596 66.0
CMS1_k127_1880617_21 Transcription factor Pcc1 K09741 - - 0.00000006674 57.0
CMS1_k127_1880617_3 Proteasome endopeptidase complex K03432 - 3.4.25.1 0.00000000000000000000000000000000000000000000000000000000000000000002859 239.0
CMS1_k127_1880617_4 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03047 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.00000000000000000000000000000000000000000000000000000000000000000004501 241.0
CMS1_k127_1880617_5 Shwachman-Bodian-Diamond syndrome (SBDS) protein K14574 - - 0.000000000000000000000000000000000000000000000000000000000000005695 223.0
CMS1_k127_1880617_6 Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Increases the RNA binding and the efficiency of RNA degradation. Confers strong poly(A) specificity to the exosome K03679 GO:0000178,GO:0000288,GO:0000291,GO:0000459,GO:0000460,GO:0000466,GO:0000467,GO:0000469,GO:0000956,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006364,GO:0006396,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010605,GO:0010629,GO:0016070,GO:0016071,GO:0016072,GO:0016073,GO:0016074,GO:0016180,GO:0019222,GO:0019439,GO:0022613,GO:0031123,GO:0031125,GO:0031126,GO:0032991,GO:0034470,GO:0034472,GO:0034475,GO:0034641,GO:0034655,GO:0034660,GO:0034661,GO:0042254,GO:0043144,GO:0043170,GO:0043628,GO:0043928,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0060255,GO:0065007,GO:0071034,GO:0071043,GO:0071051,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0090503,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901575,GO:1902494,GO:1905354 - 0.00000000000000000000000000000000000000000000000000000000006896 212.0
CMS1_k127_1880617_7 Located on the platform of the 30S subunit K02948 GO:0000028,GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0016070,GO:0016072,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034622,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0048027,GO:0065003,GO:0070181,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000004693 202.0
CMS1_k127_1880617_8 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006417,GO:0006450,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0015935,GO:0019222,GO:0019843,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032268,GO:0032270,GO:0032991,GO:0034248,GO:0034250,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0045727,GO:0045903,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0060255,GO:0065007,GO:0065008,GO:0080090,GO:0097159,GO:1901363,GO:1990904,GO:2000112 - 0.0000000000000000000000000000000000000000000000000003264 190.0
CMS1_k127_1880617_9 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022613,GO:0032991,GO:0034641,GO:0034645,GO:0042254,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000001846 180.0
CMS1_k127_1931931_0 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003112 596.0
CMS1_k127_1931931_1 Ppx GppA phosphatase K01524 - 3.6.1.11,3.6.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003275 514.0
CMS1_k127_1931931_10 serine-type endopeptidase activity - - - 0.0000000000000000000000000000000000000000000000000001901 197.0
CMS1_k127_1931931_11 - - - - 0.0000000000000000000000000000000000000000000000003573 187.0
CMS1_k127_1931931_12 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity K00549 - 2.1.1.14 0.000000000000000000000000000000000000000000000003364 185.0
CMS1_k127_1931931_13 kinase, sugar kinase superfamily K06982 - 2.7.1.169 0.000000000000000000000000000000000000000001431 168.0
CMS1_k127_1931931_14 COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases K02503 - - 0.0000000000000000000000000000000002621 136.0
CMS1_k127_1931931_15 PhoU domain K02039 - - 0.00000000000000000000000000000002275 134.0
CMS1_k127_1931931_16 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K02201 - 2.7.7.3 0.00000000000000000000000000000008463 129.0
CMS1_k127_1931931_17 PFAM Ppx GppA phosphatase K01524 - 3.6.1.11,3.6.1.40 0.000000000000000000000001586 121.0
CMS1_k127_1931931_18 - - - - 0.00000000000000000000001832 109.0
CMS1_k127_1931931_19 Transcriptional regulator K07332 - - 0.000000000000000001545 94.0
CMS1_k127_1931931_2 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002961 355.0
CMS1_k127_1931931_20 Membrane-bound serine protease (ClpP class) K07403 - - 0.000000000002021 73.0
CMS1_k127_1931931_21 Adenylate cyclase K05873 - 4.6.1.1 0.000000001246 66.0
CMS1_k127_1931931_3 Polyphosphate kinase 2 (PPK2) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008253 357.0
CMS1_k127_1931931_4 Calcineurin-like phosphoesterase superfamily domain K01090 - 3.1.3.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008 363.0
CMS1_k127_1931931_5 PFAM band 7 protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002612 314.0
CMS1_k127_1931931_6 TIGRFAM phosphate ABC transporter K02040 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004261 317.0
CMS1_k127_1931931_7 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001678 310.0
CMS1_k127_1931931_8 TIGRFAM phosphate ABC transporter K02038 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002192 268.0
CMS1_k127_1931931_9 Phosphate uptake regulator - - - 0.000000000000000000000000000000000000000000000000000000000000003172 229.0
CMS1_k127_1934276_0 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003614 304.0
CMS1_k127_1934276_1 SMART Elongator protein 3 MiaB NifB - - - 0.00000000000000000000000000000000000000000000000000000000000000000000026 256.0
CMS1_k127_1934276_2 Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group K02227 - 6.3.1.10 0.00000000000000000000000000000000000000000000000000001344 201.0
CMS1_k127_1934276_3 SMART Elongator protein 3 MiaB NifB - - - 0.0000000000000000000000000007012 121.0
CMS1_k127_1946374_0 molybdopterin-guanine dinucleotide biosynthesis K03753 - - 0.000000000000000000006852 99.0
CMS1_k127_1946374_1 Peptidase A4 family - - - 0.00000000000000005941 86.0
CMS1_k127_1946374_2 -acetyltransferase - - - 0.00000000001162 75.0
CMS1_k127_1946374_3 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.0000000002483 68.0
CMS1_k127_1946374_4 Peptidase A4 family - - - 0.0000000229 60.0
CMS1_k127_1957590_0 SMART Elongator protein 3 MiaB NifB - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004858 346.0
CMS1_k127_1957590_1 Part of a complex that catalyzes the formation of methyl-coenzyme M and tetrahydromethanopterin from coenzyme M and methyl-tetrahydromethanopterin. This is an energy-conserving, sodium-ion translocating step. MtrH catalyzes the transfer of the methyl group from methyl-tetrahydromethanopterin to the corrinoid prosthetic group of MtrA K00584 - 2.1.1.86 0.00000000000000000000000000000000000000000000000000000000000000002632 234.0
CMS1_k127_1957590_2 B12 binding domain - - - 0.00000000000001764 78.0
CMS1_k127_1957590_3 COGs COG4743 membrane protein - - - 0.0000000003601 67.0
CMS1_k127_1960226_0 Conserved region in glutamate synthase - - - 2.266e-231 727.0
CMS1_k127_1960226_1 PFAM chaperonin Cpn60 TCP-1 K22447 GO:0003674,GO:0005488,GO:0005515,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0042802,GO:0044183,GO:0051082,GO:0061077 - 1.144e-206 655.0
CMS1_k127_1960226_2 Glutamine amidotransferases class-II - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002898 498.0
CMS1_k127_1960226_3 Pyridine nucleotide-disulphide oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001245 389.0
CMS1_k127_1960226_4 GXGXG motif - - - 0.000000000000000000000000000000000000000000000000000000000000000005364 231.0
CMS1_k127_1960226_5 4Fe-4S ferredoxin iron-sulfur binding domain protein K00196 - - 0.00000000000000000000000000000000000000000000000000000000005407 207.0
CMS1_k127_1960226_6 Phosphate uptake regulator - - - 0.00000000000000000000000000000000000000000000000000177 197.0
CMS1_k127_1960226_7 THUMP domain K06963 - - 0.0000000000000000000000000000000004451 137.0
CMS1_k127_1960226_9 KEOPS complex Cgi121-like subunit K09119 - - 0.00000214 54.0
CMS1_k127_1972855_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K13798 - 2.7.7.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003876 457.0
CMS1_k127_1972855_1 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005466 280.0
CMS1_k127_1972855_2 Pyruvoyl-dependent arginine decarboxylase (PvlArgDC) K02626 - 4.1.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000003309 262.0
CMS1_k127_1972855_3 Involved in regulation of DNA replication K10725 - - 0.00000000000000000000000000000000000000000000000000000000000005126 228.0
CMS1_k127_1972855_4 Calcineurin-like phosphoesterase superfamily domain K07095 - - 0.000000000000000000000000000000000000000000002525 169.0
CMS1_k127_1972855_5 TIGRFAM molybdenum cofactor synthesis domain K03638 - 2.7.7.75 0.000000000000000000000000000000000000000000002747 170.0
CMS1_k127_1972855_6 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.000000000000000000000000000000000000000000008872 166.0
CMS1_k127_1972855_7 TPR repeat-containing protein - - - 0.000000000000000000000000026 118.0
CMS1_k127_1972855_8 regulatory protein, arsR - - - 0.00000004199 57.0
CMS1_k127_1972855_9 Lrp/AsnC ligand binding domain - - - 0.0000002869 55.0
CMS1_k127_197429_0 aconitate hydratase K01681 - 4.2.1.3 1.559e-270 846.0
CMS1_k127_197429_1 Orotidine 5'-phosphate decarboxylase / HUMPS family K01591 - 4.1.1.23 0.00000000000000000001199 97.0
CMS1_k127_2021289_0 Male sterility protein K01710 - 4.2.1.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002596 478.0
CMS1_k127_2021289_1 May be involved in maturation of the 30S ribosomal subunit K02966 - - 0.00000000000000000000000000000000000000000000000008126 182.0
CMS1_k127_2021289_2 Membrane protein involved in the export of O-antigen and teichoic acid - - - 0.000000000000000000001667 108.0
CMS1_k127_2021289_3 Belongs to the PDCD5 family K06875 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000162 95.0
CMS1_k127_2021289_4 Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends K03540 GO:0000966,GO:0001682,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004526,GO:0004540,GO:0004549,GO:0005488,GO:0005575,GO:0006139,GO:0006396,GO:0006399,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008270,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0030677,GO:0032991,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0046872,GO:0046914,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0099116,GO:0140098,GO:0140101,GO:1901360,GO:1902494,GO:1902555,GO:1905348,GO:1990904 3.1.26.5 0.0000000000000000001713 92.0
CMS1_k127_2021289_5 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 - 5.1.3.13 0.0000000003857 62.0
CMS1_k127_2021289_6 Belongs to the eukaryotic ribosomal protein eL39 family K02924 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000001582 59.0
CMS1_k127_2021289_7 PFAM CRS1 YhbY (CRM) domain K07574 - - 0.000001489 54.0
CMS1_k127_2028010_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01870 - 6.1.1.5 9.283e-229 724.0
CMS1_k127_2028010_1 glucan 1,4-alpha-glucosidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001914 623.0
CMS1_k127_2028010_2 SMART Elongator protein 3 MiaB NifB - - - 0.00000000000000000000000000000000000000000000000000000002204 216.0
CMS1_k127_2028010_3 Desulfoferrodoxin K05919 - 1.15.1.2 0.00000000000000000000000000000000000000000000000000000007181 197.0
CMS1_k127_2028010_4 PFAM Rieske 2Fe-2S domain protein K00363,K05710 - 1.7.1.15 0.000000000000000000004393 96.0
CMS1_k127_2028010_5 - - - - 0.000000001063 69.0
CMS1_k127_2071961_0 Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O K05601 - 1.7.99.1 0.00000000000000000000000000000001123 128.0
CMS1_k127_2071961_2 Peptidase family S51 - - - 0.0000000000000001179 88.0
CMS1_k127_2071961_3 HAD-hyrolase-like K07025 - - 0.000002178 49.0
CMS1_k127_2071961_4 Domain of unknown function (DUF4184) - - - 0.0001096 51.0
CMS1_k127_2073063_0 Belongs to the eukaryotic ribosomal protein eL15 family K02877 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000001541 246.0
CMS1_k127_2073063_1 Sugar-specific transcriptional regulator TrmB - - - 0.0000000000000000001176 98.0
CMS1_k127_2073063_2 RNA binding K07581 - - 0.0000001642 59.0
CMS1_k127_2073063_3 Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends K03537 GO:0000966,GO:0001682,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004526,GO:0004540,GO:0004549,GO:0005575,GO:0006139,GO:0006396,GO:0006399,GO:0006464,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009249,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0018065,GO:0018193,GO:0018205,GO:0019538,GO:0030677,GO:0032991,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0046483,GO:0051604,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0099116,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1902494,GO:1902555,GO:1905348,GO:1990904 3.1.26.5 0.000002119 53.0
CMS1_k127_2073063_4 Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends K03539 - 3.1.26.5 0.00000419 57.0
CMS1_k127_2073063_5 60S ribosomal protein L13 K02873 - - 0.0004026 45.0
CMS1_k127_2081389_0 PFAM NADH-ubiquinone oxidoreductase, chain 49kDa - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009433 399.0
CMS1_k127_2081389_1 ABC transporter K02010,K02017,K02052,K02062,K10112,K11072,K15497,K17240 - 3.6.3.29,3.6.3.30,3.6.3.31,3.6.3.55 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004536 308.0
CMS1_k127_2081389_2 PFAM NADH ubiquinone oxidoreductase 20 kDa subunit K14088 - - 0.000000000000000000000000000000000000000000000000000000000000004201 220.0
CMS1_k127_2081389_3 ABC-type spermidine putrescine transport system, permease component II K02053 - - 0.00000000000000000001013 101.0
CMS1_k127_2084409_0 spermatid development - GO:0000003,GO:0003006,GO:0005575,GO:0005623,GO:0005929,GO:0007276,GO:0007281,GO:0007283,GO:0007286,GO:0008150,GO:0009987,GO:0019953,GO:0022412,GO:0022414,GO:0030154,GO:0031514,GO:0032501,GO:0032502,GO:0032504,GO:0036126,GO:0042995,GO:0043226,GO:0044464,GO:0044703,GO:0048232,GO:0048468,GO:0048515,GO:0048609,GO:0048856,GO:0048869,GO:0051704,GO:0097223,GO:0097729,GO:0120025 - 0.00000000000006973 72.0
CMS1_k127_2084409_1 It is involved in the biological process described with cell adhesion K06484,K06487,K06584 GO:0000003,GO:0000165,GO:0000302,GO:0000902,GO:0000904,GO:0001525,GO:0001568,GO:0001655,GO:0001656,GO:0001667,GO:0001701,GO:0001704,GO:0001706,GO:0001707,GO:0001708,GO:0001726,GO:0001775,GO:0001816,GO:0001822,GO:0001890,GO:0001892,GO:0001894,GO:0001932,GO:0001934,GO:0001944,GO:0001968,GO:0002009,GO:0002011,GO:0002020,GO:0002064,GO:0002065,GO:0002066,GO:0002119,GO:0002164,GO:0002165,GO:0002237,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0002474,GO:0002478,GO:0002479,GO:0002520,GO:0002790,GO:0003006,GO:0003008,GO:0003674,GO:0004888,GO:0005102,GO:0005126,GO:0005154,GO:0005161,GO:0005172,GO:0005178,GO:0005215,GO:0005216,GO:0005244,GO:0005245,GO:0005261,GO:0005262,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005794,GO:0005829,GO:0005886,GO:0005887,GO:0005902,GO:0005912,GO:0005924,GO:0005925,GO:0006355,GO:0006357,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0006873,GO:0006874,GO:0006875,GO:0006887,GO:0006897,GO:0006909,GO:0006915,GO:0006928,GO:0006935,GO:0006950,GO:0006952,GO:0006954,GO:0006955,GO:0006979,GO:0006996,GO:0007010,GO:0007044,GO:0007045,GO:0007154,GO:0007155,GO:0007157,GO:0007159,GO:0007160,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0007204,GO:0007229,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007297,GO:0007298,GO:0007369,GO:0007399,GO:0007409,GO:0007411,GO:0007414,GO:0007417,GO:0007419,GO:0007423,GO:0007424,GO:0007426,GO:0007427,GO:0007431,GO:0007435,GO:0007444,GO:0007472,GO:0007475,GO:0007476,GO:0007492,GO:0007494,GO:0007498,GO:0007517,GO:0007548,GO:0007552,GO:0007560,GO:0007600,GO:0007606,GO:0007608,GO:0007610,GO:0007611,GO:0007613,GO:0008037,GO:0008038,GO:0008104,GO:0008150,GO:0008152,GO:0008219,GO:0008284,GO:0008305,GO:0008324,GO:0008406,GO:0008587,GO:0009306,GO:0009566,GO:0009593,GO:0009595,GO:0009605,GO:0009607,GO:0009611,GO:0009617,GO:0009653,GO:0009790,GO:0009791,GO:0009792,GO:0009886,GO:0009887,GO:0009888,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009897,GO:0009925,GO:0009966,GO:0009967,GO:0009968,GO:0009986,GO:0009987,GO:0010033,GO:0010035,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010562,GO:0010604,GO:0010605,GO:0010628,GO:0010631,GO:0010646,GO:0010647,GO:0010648,GO:0010669,GO:0010743,GO:0010745,GO:0010810,GO:0010811,GO:0010869,GO:0010871,GO:0010883,GO:0010888,GO:0010927,GO:0010941,GO:0012501,GO:0012505,GO:0012506,GO:0014069,GO:0015026,GO:0015031,GO:0015075,GO:0015085,GO:0015267,GO:0015318,GO:0015833,GO:0016020,GO:0016021,GO:0016032,GO:0016043,GO:0016192,GO:0016203,GO:0016310,GO:0016323,GO:0016477,GO:0017015,GO:0019058,GO:0019219,GO:0019220,GO:0019222,GO:0019538,GO:0019725,GO:0019838,GO:0019882,GO:0019884,GO:0019899,GO:0019953,GO:0019955,GO:0021551,GO:0022008,GO:0022412,GO:0022414,GO:0022603,GO:0022607,GO:0022610,GO:0022612,GO:0022803,GO:0022832,GO:0022836,GO:0022838,GO:0022839,GO:0022843,GO:0022857,GO:0022890,GO:0023014,GO:0023051,GO:0023052,GO:0023056,GO:0023057,GO:0030001,GO:0030003,GO:0030016,GO:0030017,GO:0030027,GO:0030029,GO:0030030,GO:0030036,GO:0030054,GO:0030055,GO:0030097,GO:0030100,GO:0030139,GO:0030141,GO:0030154,GO:0030155,GO:0030175,GO:0030182,GO:0030198,GO:0030239,GO:0030260,GO:0030334,GO:0030335,GO:0030425,GO:0030511,GO:0030659,GO:0030667,GO:0030707,GO:0030855,GO:0030947,GO:0030949,GO:0031032,GO:0031090,GO:0031175,GO:0031224,GO:0031226,GO:0031252,GO:0031253,GO:0031256,GO:0031258,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031328,GO:0031399,GO:0031401,GO:0031410,GO:0031430,GO:0031527,GO:0031528,GO:0031589,GO:0031672,GO:0031982,GO:0032231,GO:0032268,GO:0032270,GO:0032279,GO:0032368,GO:0032369,GO:0032490,GO:0032501,GO:0032502,GO:0032504,GO:0032587,GO:0032589,GO:0032590,GO:0032591,GO:0032879,GO:0032940,GO:0032956,GO:0032970,GO:0032989,GO:0032990,GO:0032991,GO:0033036,GO:0033043,GO:0033218,GO:0033627,GO:0033631,GO:0033688,GO:0033690,GO:0034103,GO:0034113,GO:0034220,GO:0034329,GO:0034330,GO:0034332,GO:0034333,GO:0034446,GO:0034678,GO:0034683,GO:0034684,GO:0034685,GO:0034686,GO:0035099,GO:0035107,GO:0035114,GO:0035120,GO:0035152,GO:0035160,GO:0035162,GO:0035220,GO:0035239,GO:0035262,GO:0035272,GO:0035295,GO:0035313,GO:0035556,GO:0035579,GO:0035821,GO:0035866,GO:0035867,GO:0035868,GO:0035987,GO:0036211,GO:0036230,GO:0036477,GO:0038023,GO:0038027,GO:0038034,GO:0038044,GO:0040011,GO:0040012,GO:0040017,GO:0040025,GO:0040028,GO:0042058,GO:0042059,GO:0042060,GO:0042110,GO:0042119,GO:0042127,GO:0042221,GO:0042277,GO:0042325,GO:0042327,GO:0042330,GO:0042383,GO:0042471,GO:0042472,GO:0042493,GO:0042581,GO:0042590,GO:0042592,GO:0042692,GO:0042886,GO:0042981,GO:0042995,GO:0043005,GO:0043009,GO:0043025,GO:0043062,GO:0043066,GO:0043067,GO:0043069,GO:0043170,GO:0043184,GO:0043197,GO:0043204,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043235,GO:0043277,GO:0043292,GO:0043299,GO:0043312,GO:0043408,GO:0043410,GO:0043412,GO:0043542,GO:0043583,GO:0043900,GO:0043901,GO:0043903,GO:0044003,GO:0044068,GO:0044085,GO:0044087,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044297,GO:0044309,GO:0044319,GO:0044403,GO:0044409,GO:0044419,GO:0044422,GO:0044424,GO:0044425,GO:0044433,GO:0044444,GO:0044446,GO:0044449,GO:0044456,GO:0044459,GO:0044463,GO:0044464,GO:0044703,GO:0044877,GO:0045055,GO:0045124,GO:0045137,GO:0045165,GO:0045177,GO:0045178,GO:0045184,GO:0045185,GO:0045202,GO:0045214,GO:0045216,GO:0045321,GO:0045335,GO:0045595,GO:0045596,GO:0045714,GO:0045715,GO:0045765,GO:0045766,GO:0045785,GO:0045807,GO:0045893,GO:0045935,GO:0045937,GO:0045944,GO:0046649,GO:0046718,GO:0046850,GO:0046873,GO:0046903,GO:0046982,GO:0046983,GO:0048002,GO:0048010,GO:0048041,GO:0048332,GO:0048333,GO:0048468,GO:0048477,GO:0048513,GO:0048514,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048534,GO:0048562,GO:0048563,GO:0048565,GO:0048568,GO:0048569,GO:0048580,GO:0048583,GO:0048584,GO:0048585,GO:0048598,GO:0048608,GO:0048609,GO:0048646,GO:0048666,GO:0048667,GO:0048699,GO:0048707,GO:0048729,GO:0048731,GO:0048732,GO:0048736,GO:0048737,GO:0048745,GO:0048812,GO:0048839,GO:0048856,GO:0048858,GO:0048869,GO:0048870,GO:0048871,GO:0048878,GO:0050431,GO:0050663,GO:0050730,GO:0050731,GO:0050746,GO:0050748,GO:0050764,GO:0050766,GO:0050789,GO:0050793,GO:0050794,GO:0050801,GO:0050839,GO:0050840,GO:0050877,GO:0050890,GO:0050896,GO:0050900,GO:0050919,GO:0051049,GO:0051050,GO:0051051,GO:0051093,GO:0051094,GO:0051128,GO:0051130,GO:0051145,GO:0051146,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051179,GO:0051209,GO:0051234,GO:0051235,GO:0051239,GO:0051240,GO:0051246,GO:0051247,GO:0051248,GO:0051252,GO:0051254,GO:0051270,GO:0051272,GO:0051282,GO:0051283,GO:0051480,GO:0051492,GO:0051493,GO:0051606,GO:0051641,GO:0051649,GO:0051674,GO:0051701,GO:0051704,GO:0051707,GO:0051716,GO:0051806,GO:0051817,GO:0051828,GO:0052066,GO:0052190,GO:0052191,GO:0052231,GO:0052370,GO:0052522,GO:0055001,GO:0055002,GO:0055065,GO:0055074,GO:0055080,GO:0055082,GO:0055085,GO:0055120,GO:0055123,GO:0060089,GO:0060099,GO:0060100,GO:0060249,GO:0060255,GO:0060401,GO:0060402,GO:0060429,GO:0060537,GO:0060538,GO:0060541,GO:0060548,GO:0060562,GO:0060627,GO:0060706,GO:0060707,GO:0061061,GO:0061062,GO:0061458,GO:0061564,GO:0065007,GO:0065008,GO:0070161,GO:0070371,GO:0070588,GO:0070838,GO:0070851,GO:0070925,GO:0071062,GO:0071702,GO:0071704,GO:0071705,GO:0071731,GO:0071840,GO:0071944,GO:0072001,GO:0072325,GO:0072327,GO:0072358,GO:0072359,GO:0072503,GO:0072507,GO:0072511,GO:0080090,GO:0090092,GO:0090100,GO:0090130,GO:0090132,GO:0090287,GO:0090504,GO:0090505,GO:0090596,GO:0097060,GO:0097190,GO:0097191,GO:0097192,GO:0097366,GO:0097435,GO:0097447,GO:0097458,GO:0097485,GO:0097553,GO:0097708,GO:0098552,GO:0098581,GO:0098588,GO:0098590,GO:0098609,GO:0098636,GO:0098655,GO:0098657,GO:0098660,GO:0098662,GO:0098742,GO:0098771,GO:0098794,GO:0098796,GO:0098797,GO:0098802,GO:0098805,GO:0098858,GO:0098984,GO:0099080,GO:0099081,GO:0099503,GO:0099512,GO:0099572,GO:0110020,GO:0110053,GO:0120025,GO:0120036,GO:0120038,GO:0120039,GO:1901074,GO:1901076,GO:1901184,GO:1901185,GO:1901342,GO:1901564,GO:1901698,GO:1901700,GO:1902531,GO:1902533,GO:1902680,GO:1902903,GO:1903506,GO:1903508,GO:1903670,GO:1903672,GO:1903844,GO:1903846,GO:1904018,GO:1905153,GO:1905155,GO:1905952,GO:1905953,GO:1990430,GO:2000026,GO:2000112,GO:2000145,GO:2000147,GO:2000209,GO:2000425,GO:2000427,GO:2000535,GO:2000536,GO:2000721,GO:2000811,GO:2001141,GO:2001233,GO:2001234,GO:2001236,GO:2001237 - 0.00001173 57.0
CMS1_k127_2086758_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03041 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 3.503e-317 994.0
CMS1_k127_2086758_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K13798 - 2.7.7.6 1.023e-289 906.0
CMS1_k127_2113163_0 Psort location Cytoplasmic, score - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002563 428.0
CMS1_k127_2113163_1 Protein of unknown function (DUF1667) - - - 0.00000000000000000000000000000000001002 139.0
CMS1_k127_2113163_2 4Fe-4S single cluster domain K05337 - - 0.0001037 48.0
CMS1_k127_2125595_0 Daunorubicin ABC transporter ATPase K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001071 299.0
CMS1_k127_2125595_1 ABC-type multidrug transport system, permease component K01992 - - 0.0000000000000000000000000000000000000000004727 167.0
CMS1_k127_2125595_2 ABC-type Fe3 transport system permease component K02053,K02054,K02063 - - 0.00000000000000000000000000000004663 136.0
CMS1_k127_2125595_3 Mo-molybdopterin cofactor metabolic process K03753 - - 0.0009906 45.0
CMS1_k127_2168200_0 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000000001333 120.0
CMS1_k127_2168200_1 nitric oxide reductase activity - - - 0.0000000000000000000003434 105.0
CMS1_k127_2168200_2 Transcriptional regulator K07108,K22206 - - 0.000000000000000006068 88.0
CMS1_k127_2168200_3 membrane - - - 0.000000000005269 70.0
CMS1_k127_2168200_4 membrane - - - 0.00000000005621 65.0
CMS1_k127_2180633_0 Possesses two activities a DNA synthesis (polymerase) and an exonucleolytic activity that degrades single-stranded DNA in the 3'- to 5'-direction. Has a template-primer preference which is characteristic of a replicative DNA polymerase K02322 - 2.7.7.7 7.327e-290 927.0
CMS1_k127_2180633_1 Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P). This reaction is the first ether-bond-formation step in the biosynthesis of archaeal membrane lipids K17104 GO:0000107,GO:0003674,GO:0003824,GO:0016740,GO:0016757,GO:0016763 2.5.1.41 0.0000000000000000000000000000000000000000000000000000000000000000000000003612 254.0
CMS1_k127_2180633_10 Sec61beta family - - - 0.000000008057 58.0
CMS1_k127_2180633_2 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source K01916 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000312 244.0
CMS1_k127_2180633_3 Carbon-nitrogen hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000005924 214.0
CMS1_k127_2180633_4 Predicted membrane protein (DUF2070) K08979 - - 0.000000000000000000000000000000000000003125 166.0
CMS1_k127_2180633_5 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.0000000000000000000000000000000001808 139.0
CMS1_k127_2180633_6 MazG nucleotide pyrophosphohydrolase domain - - - 0.00000000000000000000000000003489 118.0
CMS1_k127_2180633_7 nucleic acid-binding protein, consists of a PIN domain and a Zn-ribbon module K07060 GO:0000469,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004540,GO:0005575,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016787,GO:0016788,GO:0022613,GO:0030490,GO:0030684,GO:0030688,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0042274,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1990904 - 0.000000000000000000000002673 109.0
CMS1_k127_2180633_8 - - - - 0.0000000000000000005943 91.0
CMS1_k127_2180633_9 Transcription elongation factor Elf1 like - - - 0.0000000004938 63.0
CMS1_k127_2183804_0 Dienelactone hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003525 243.0
CMS1_k127_2183804_1 PFAM Phosphoribosyltransferase - - - 0.0000000000000000000000000000000000000000000000000001218 192.0
CMS1_k127_2183804_2 Creatinine amidohydrolase K01470 - 3.5.2.10 0.00000000000000000000000000000000000000000000001631 179.0
CMS1_k127_2183804_3 PFAM OsmC family protein K07397 - - 0.000000000000000000000000000008646 123.0
CMS1_k127_2190031_0 - - - - 0.000004003 50.0
CMS1_k127_2190031_1 COG1520 FOG WD40-like repeat K17713 - - 0.0001457 55.0
CMS1_k127_2198155_0 Catalyzes the conversion of dihydroorotate to orotate K17828 - 1.3.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005383 315.0
CMS1_k127_2198155_1 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B K02823 - - 0.0000000000000000000000000000000000000000000000000000000004242 211.0
CMS1_k127_2198155_2 COG0517 FOG CBS domain - - - 0.0000000000000000000000000000000000000000000002017 182.0
CMS1_k127_2198155_3 membrane-bound metal-dependent K07038 - - 0.0002886 51.0
CMS1_k127_2198155_4 - - - - 0.0002902 51.0
CMS1_k127_2228897_0 Beta-Casp domain K07041 - - 9.332e-212 676.0
CMS1_k127_2228897_1 Aminotransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006757 319.0
CMS1_k127_2228897_2 Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation K03433 - 3.4.25.1 0.0000000000000000000000000000000000000000000000000000004394 199.0
CMS1_k127_2228897_3 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K00058 - 1.1.1.399,1.1.1.95 0.0000000000000000000000000000000000000000000000001478 183.0
CMS1_k127_2228897_4 Pfam:DUF552 K09152 - - 0.0000000000000000005369 94.0
CMS1_k127_2294026_0 PFAM aminoacyl-tRNA synthetase class Ib K01867 - 6.1.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008316 456.0
CMS1_k127_2294026_1 PAS domain - - - 0.000000000000000000000000000000000000000000000000002734 190.0
CMS1_k127_2349333_0 Exchanges the guanine residue with 7-cyano-7- deazaguanine (preQ0) at position 15 in the dihydrouridine loop (D- loop) of archaeal tRNAs K18779 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0018130,GO:0019438,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046116,GO:0046483,GO:0055086,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.2.48 0.000000000000000000000000000000000000000008723 159.0
CMS1_k127_2349333_1 PAC2 family K07159 - - 0.000000000000000000000000000000000000006488 154.0
CMS1_k127_2349333_2 PFAM Like-Sm ribonucleoprotein, core - - - 0.0000000000000000000000002332 110.0
CMS1_k127_2368986_0 heavy metal-(Cd Co Hg Pb Zn)-translocating K01534 - 3.6.3.3,3.6.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000867 432.0
CMS1_k127_2368986_1 Prokaryotic glutathione synthetase, ATP-grasp domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000139 243.0
CMS1_k127_2368986_2 AIR synthase related protein, C-terminal domain - - - 0.0000000000000000000000000000000000000000000000003597 188.0
CMS1_k127_2528805_0 Catalyzes the condensation of pyruvate and acetyl- coenzyme A to form (R)-citramalate K09011 - 2.3.1.182 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002946 526.0
CMS1_k127_2528805_1 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005974 282.0
CMS1_k127_2528805_2 Belongs to the IlvD Edd family K01687 - 4.2.1.9 0.000000000000000000000000000000000000000000000000201 179.0
CMS1_k127_2538091_0 exonuclease of the beta-lactamase fold involved in RNA processing K07577 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009315 376.0
CMS1_k127_2538091_1 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein K14091 - - 0.000000000000001048 81.0
CMS1_k127_2538091_2 protein conserved in archaea - - - 0.000000000001003 78.0
CMS1_k127_2547503_0 Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val) K01265 - 3.4.11.18 0.0000000000000000000000000000000000000000000000000000000000000000000004256 247.0
CMS1_k127_2547503_1 FMN binding - - - 0.00000000000000000000000000000000000001784 151.0
CMS1_k127_2547503_2 metalloendopeptidase activity - - - 0.0005081 44.0
CMS1_k127_2571882_0 Conserved protein implicated in secretion - - - 0.000000000000000000000000000000002322 135.0
CMS1_k127_258882_0 Belongs to the peptidase S16 family - - - 1.791e-307 962.0
CMS1_k127_258882_1 D-isomer specific 2-hydroxyacid dehydrogenase catalytic region K00058 - 1.1.1.399,1.1.1.95 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007284 394.0
CMS1_k127_258882_2 Catalyzes the reversible interconversion of serine and glycine with a modified folate serving as the one-carbon carrier. Also exhibits a pteridine-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007748 376.0
CMS1_k127_258882_3 Diphthamide synthase K06927 - 6.3.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000002246 266.0
CMS1_k127_258882_4 Iron dependent K03709 - - 0.000000000000000000000000000000000000000000000000000000005097 203.0
CMS1_k127_258882_5 PFAM Glutamine amidotransferase class-I - - - 0.00000000000000000000000000000000882 134.0
CMS1_k127_258882_6 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis K04479 - 2.7.7.7 0.0002017 51.0
CMS1_k127_259218_0 Belongs to the aspartokinase family K00928 - 2.7.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001009 469.0
CMS1_k127_259218_1 homoserine dehydrogenase K00003 - 1.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001748 291.0
CMS1_k127_259218_2 AAA domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001229 268.0
CMS1_k127_259218_3 deoxyhypusine monooxygenase activity - - - 0.0001101 52.0
CMS1_k127_2602373_0 COG1331 Highly conserved protein containing a thioredoxin domain K06888 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001346 498.0
CMS1_k127_2602373_1 metal-dependent protease of the PAD1 JAB1 superfamily - - - 0.0000000000000000000004997 100.0
CMS1_k127_2602373_2 - - - - 0.0000000000000000006351 92.0
CMS1_k127_2602373_3 Protein of unknown function (DUF2400) - - - 0.0000009461 61.0
CMS1_k127_261210_0 synthetase (ADP forming), alpha K01905,K09181,K22224 GO:0003674,GO:0003824,GO:0006464,GO:0006473,GO:0006475,GO:0006807,GO:0006950,GO:0006979,GO:0008080,GO:0008150,GO:0008152,GO:0009266,GO:0009408,GO:0009628,GO:0009987,GO:0016043,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0018193,GO:0018205,GO:0018393,GO:0018394,GO:0019538,GO:0022607,GO:0032459,GO:0032462,GO:0034212,GO:0036211,GO:0043170,GO:0043254,GO:0043412,GO:0043543,GO:0043933,GO:0044085,GO:0044087,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0052858,GO:0061733,GO:0065003,GO:0065007,GO:0071704,GO:0071840,GO:1901564 6.2.1.13 2.276e-227 728.0
CMS1_k127_261210_1 Catalyzes the reversible reduction of methylene-H(4)MPT to methyl-H(4)MPT K00320 - 1.5.98.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004204 359.0
CMS1_k127_261210_2 NADP oxidoreductase coenzyme F420-dependent K06988 - 1.5.1.40 0.0000000000000000000000000000000000001216 149.0
CMS1_k127_261210_3 Guanylyltransferase that catalyzes the activation of 2- phospho-L-lactate (LP) as (2S)-lactyl-2-diphospho-5'-guanosine (LPPG), via the condensation of LP with GTP. Is involved in the biosynthesis of coenzyme F420, a hydride carrier cofactor K14941 - 2.7.7.68 0.00000000000000974 83.0
CMS1_k127_2673063_0 COG0455 ATPases involved in chromosome partitioning K03496,K03609 - - 0.000000000000000000000000000000000000000000003989 175.0
CMS1_k127_2673063_1 Transcriptional regulator, TrmB - - - 0.0000000000000004381 83.0
CMS1_k127_2673063_2 Transcriptional regulator - - - 0.000002617 53.0
CMS1_k127_2721768_0 Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle K01596 - 4.1.1.32 8.187e-205 650.0
CMS1_k127_2721768_1 PFAM tRNA synthetase, class II (D, K and N) K01893 - 6.1.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004931 360.0
CMS1_k127_2721768_2 Metallo-beta-lactamase superfamily K01069 GO:0003674,GO:0003824,GO:0004416,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006081,GO:0006082,GO:0006089,GO:0008150,GO:0008152,GO:0009056,GO:0009438,GO:0009987,GO:0016787,GO:0016788,GO:0016790,GO:0019243,GO:0019752,GO:0032787,GO:0042180,GO:0042182,GO:0043436,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046185,GO:0051596,GO:0061727,GO:0071704,GO:1901575,GO:1901615 3.1.2.6 0.00000000000000000000000000000000000000000000000000006862 194.0
CMS1_k127_2721768_3 PFAM regulatory protein AsnC Lrp family K03718 - - 0.0000000000000000000000000000000000000000000005779 171.0
CMS1_k127_2721768_4 Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle K01596 - 4.1.1.32 0.0000000000000000000000000002526 115.0
CMS1_k127_2721768_5 HxlR-like helix-turn-helix - - - 0.000000000000000001046 91.0
CMS1_k127_2724235_0 PFAM Glycosyl transferase, group 1 K16150 - 2.4.1.11 0.000000000000000000000000000000000000000002673 170.0
CMS1_k127_2762664_0 TIGRFAM DNA polymerase (pol2) K02319 - 2.7.7.7 3.26e-211 682.0
CMS1_k127_2762664_1 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Also part of the exosome, which is a complex involved in RNA degradation. Acts as a poly(A)-binding protein that enhances the interaction between heteropolymeric, adenine-rich transcripts and the exosome K02316 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007156 344.0
CMS1_k127_2762664_3 PFAM NurA domain - - - 0.00000000000000007531 92.0
CMS1_k127_2762664_4 DNA binding - - - 0.00000000000003935 82.0
CMS1_k127_2762664_5 4-oxalocrotonate tautomerase K01821 - 5.3.2.6 0.0000001333 61.0
CMS1_k127_2762664_6 COG0433 Predicted ATPase K06915 - - 0.000003251 53.0
CMS1_k127_2825565_0 Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. LysY sub-subfamily K05829 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009956 423.0
CMS1_k127_2825565_1 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K05830 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001922 410.0
CMS1_k127_2825565_2 Involved in both the arginine and lysine biosynthetic pathways. Phosphorylates the LysW-bound precursors glutamate (for arginine biosynthesis), respectively alpha-aminoadipate (for lysine biosynthesis) K05828 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001367 285.0
CMS1_k127_2825565_3 Catalyzes the release of L-lysine from LysW -gamma-L- lysine and the release of L-ornithine from LysW -L-ornithine K05831 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002309 289.0
CMS1_k127_2825565_4 Sodium/hydrogen exchanger family K03316 - - 0.0000025 55.0
CMS1_k127_2825565_5 RimK domain protein ATP-grasp K14940 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0016874,GO:0016879,GO:0016881,GO:0043774,GO:0044424,GO:0044464 6.3.2.32 0.00003509 55.0
CMS1_k127_2834506_0 PFAM aldo keto reductase K07079 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005224 453.0
CMS1_k127_2834506_1 COG0463 Glycosyltransferases involved in cell wall biogenesis K13693 - 2.4.1.266 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001709 290.0
CMS1_k127_2834506_2 DNA polymerase LigD polymerase domain K01971,K10747 GO:0000166,GO:0000287,GO:0000726,GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0003887,GO:0003896,GO:0003899,GO:0003909,GO:0003910,GO:0004518,GO:0004527,GO:0004529,GO:0004536,GO:0004652,GO:0005488,GO:0005524,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006266,GO:0006269,GO:0006281,GO:0006302,GO:0006303,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008144,GO:0008150,GO:0008152,GO:0008296,GO:0008297,GO:0008310,GO:0008408,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0016796,GO:0016874,GO:0016886,GO:0016895,GO:0017076,GO:0018130,GO:0019438,GO:0030145,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0032774,GO:0033554,GO:0034061,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0050896,GO:0051716,GO:0070566,GO:0071704,GO:0071897,GO:0071944,GO:0090304,GO:0090305,GO:0097159,GO:0097367,GO:0097747,GO:0140097,GO:0140098,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901576 6.5.1.1,6.5.1.6,6.5.1.7 0.000000000000000000000000000000000000000000000000000000000000001237 228.0
CMS1_k127_2834506_3 PRC-barrel domain protein - - - 0.000000000000004601 81.0
CMS1_k127_2834506_4 PFAM nucleic acid binding, OB-fold, tRNA helicase-type K07466 - - 0.0000000005937 68.0
CMS1_k127_2866857_0 COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004061 249.0
CMS1_k127_2866857_1 Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB NOP family K03500 - 2.1.1.176 0.000000000000000000000000000000000000000000000000000000000000003172 234.0
CMS1_k127_2866857_2 Protein of unknown function, DUF488 - - - 0.0000000000000000000000000000000000000000000000000000000002205 208.0
CMS1_k127_2866857_3 4-amino-4-deoxy-alpha-L-arabinopyranosyl undecaprenyl phosphate biosynthetic process K22278 - 3.5.1.104 0.0000000000000000000000000000000000000000000000000000002051 203.0
CMS1_k127_2873943_0 binding domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000004377 237.0
CMS1_k127_2873943_1 PFAM cation efflux protein - - - 0.00000000000000000000000000004197 128.0
CMS1_k127_2873943_2 helix_turn_helix, Arsenical Resistance Operon Repressor K21903 - - 0.000000009164 60.0
CMS1_k127_2873943_3 - - - - 0.00000002322 58.0
CMS1_k127_2898021_0 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001368 319.0
CMS1_k127_2898021_1 One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome K02930 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003092 263.0
CMS1_k127_2898021_10 - - - - 0.00008264 50.0
CMS1_k127_2898021_2 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000004822 239.0
CMS1_k127_2898021_3 DNA-directed RNA polymerase K03049 - 2.7.7.6 0.000000000000000000000000000000000000000000000000000006022 194.0
CMS1_k127_2898021_4 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015935,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042274,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.000000000000000000000000000000000000000000000000396 178.0
CMS1_k127_2898021_5 Belongs to the UPF0218 family K09735 - - 0.0000000000000000000000000000376 123.0
CMS1_k127_2898021_6 Binds to 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome K02892 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000005474 92.0
CMS1_k127_2898021_7 Belongs to the eukaryotic ribosomal protein eS24 family K02974 - - 0.00000000000005313 75.0
CMS1_k127_2898021_8 Transcription elongation factor Spt4 K03050 - 2.7.7.6 0.0000000000002309 71.0
CMS1_k127_2898021_9 Belongs to the eukaryotic ribosomal protein eS31 family K02977 - - 0.00000000001151 67.0
CMS1_k127_2973106_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01887 GO:0003674,GO:0003824,GO:0004812,GO:0004814,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006420,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001839 472.0
CMS1_k127_2973106_1 Belongs to the cysteine synthase cystathionine beta- synthase family K01738 - 2.5.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001091 444.0
CMS1_k127_2973106_2 PFAM histone deacetylase superfamily - - - 0.0000000000000000000000000000000000000000000004643 177.0
CMS1_k127_2973106_3 PFAM 4Fe-4S binding domain - - - 0.00000000000000000000000000007355 123.0
CMS1_k127_2973106_4 PFAM transferase hexapeptide repeat containing protein K00640 - 2.3.1.30 0.00000000000002281 79.0
CMS1_k127_2975531_0 Oligopeptidase F K08602 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003531 265.0
CMS1_k127_2975531_1 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.00000000000000000000000000000000000000002634 162.0
CMS1_k127_3083607_0 Cation transporter/ATPase, N-terminus K01537 - 3.6.3.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001038 300.0
CMS1_k127_3083607_1 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 0.000000000000000000000000000000000000000000003201 173.0
CMS1_k127_308956_0 Thioredoxin K03671 - - 0.0000000000000000000000000000000000000007471 153.0
CMS1_k127_308956_1 Alpha/beta hydrolase family - - - 0.000000000000000000000000000001019 132.0
CMS1_k127_308956_2 Transcriptional regulator - - - 0.0000000000000006848 82.0
CMS1_k127_308956_3 4Fe-4S dicluster domain - - - 0.0000007176 53.0
CMS1_k127_3089888_0 PFAM CoA-binding domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002535 484.0
CMS1_k127_3089888_1 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 GO:0000166,GO:0003674,GO:0003824,GO:0004365,GO:0005488,GO:0008150,GO:0008152,GO:0016491,GO:0016620,GO:0016903,GO:0036094,GO:0043891,GO:0048037,GO:0050662,GO:0051287,GO:0055114,GO:0097159,GO:1901265,GO:1901363 1.2.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008611 434.0
CMS1_k127_3089888_10 Flavodoxin-like fold K19784 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000006315 250.0
CMS1_k127_3089888_11 PFAM Aminotransferase class I and II K00817 - 2.6.1.9 0.00000000000000000000000000000000000000000000000000000000000000003942 236.0
CMS1_k127_3089888_12 imidazoleglycerol-phosphate dehydratase K01693 - 4.2.1.19 0.00000000000000000000000000000000000000000000000000000000001189 212.0
CMS1_k127_3089888_13 1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase K01814 - 5.3.1.16 0.0000000000000000000000000000000000000000000000000000009589 200.0
CMS1_k127_3089888_14 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.0000000000000000000000000000000000000000000000000001052 193.0
CMS1_k127_3089888_15 F420-0:Gamma-glutamyl ligase - - - 0.00000000000000000000000000000000000000000000005826 179.0
CMS1_k127_3089888_16 belongs to the PRA-CH family K01496,K11755 - 3.5.4.19,3.6.1.31 0.00000000000000000000000000000000000000007954 153.0
CMS1_k127_3089888_17 Hydrogenase/urease nickel incorporation, metallochaperone, hypA K04651 - - 0.00000000000000000000000000000000006954 137.0
CMS1_k127_3089888_18 PFAM Glycosyl transferase, group 1 - GO:0003674,GO:0003824,GO:0016740,GO:0016757 - 0.000000000000000000000001464 111.0
CMS1_k127_3089888_19 Belongs to the glycosyl hydrolase 57 family K07405 - 3.2.1.1 0.0000000000000000000001355 104.0
CMS1_k127_3089888_2 Belongs to the phosphoglycerate kinase family K00927 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.7.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002849 424.0
CMS1_k127_3089888_20 Catalyzes the CTP-dependent phosphorylation of riboflavin (vitamin B2) to form flavin mononucleotide (FMN) K07732 - 2.7.1.161 0.000000000000000007107 88.0
CMS1_k127_3089888_21 HAD-hyrolase-like K07025 - - 0.0000000000000003123 88.0
CMS1_k127_3089888_22 - - - - 0.0000000003201 68.0
CMS1_k127_3089888_23 - - - - 0.000001661 55.0
CMS1_k127_3089888_3 PFAM Radical SAM domain protein K04069 - 1.97.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005585 415.0
CMS1_k127_3089888_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007112 396.0
CMS1_k127_3089888_5 PFAM Glycosyl transferase, group 1 K16150 - 2.4.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001093 391.0
CMS1_k127_3089888_6 PFAM peptidase U62 modulator of DNA gyrase K03568 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0008270,GO:0016787,GO:0019538,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0043170,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0046983,GO:0070011,GO:0071704,GO:0140096,GO:1901564 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004295 392.0
CMS1_k127_3089888_7 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 GO:0000107,GO:0003674,GO:0003824,GO:0016740,GO:0016757,GO:0016763 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003115 330.0
CMS1_k127_3089888_8 modulator of DNA gyrase K03592 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001712 291.0
CMS1_k127_3089888_9 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000007146 261.0
CMS1_k127_3096332_0 DNA polymerase elongation subunit (Family B) K02319 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001331 608.0
CMS1_k127_3096332_1 Involved in DNA repair and in homologous recombination. Binds and assemble on single-stranded DNA to form a nucleoprotein filament. Hydrolyzes ATP in a ssDNA-dependent manner and promotes DNA strand exchange between homologous DNA molecules K04483 GO:0000150,GO:0000217,GO:0000400,GO:0000724,GO:0000725,GO:0000730,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003697,GO:0003824,GO:0005488,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006310,GO:0006312,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009314,GO:0009628,GO:0009987,GO:0010212,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022607,GO:0033554,GO:0034622,GO:0034641,GO:0042148,GO:0042623,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0045003,GO:0046483,GO:0050896,GO:0051716,GO:0065003,GO:0065004,GO:0071704,GO:0071824,GO:0071840,GO:0090304,GO:0090735,GO:0097159,GO:0140097,GO:1901360,GO:1901363 - 0.00000000006536 71.0
CMS1_k127_3096332_2 - - - - 0.00000002019 59.0
CMS1_k127_3096970_0 SMC proteins Flexible Hinge Domain K03529 - - 0.000000000000000000000000000000000000000000000000006127 194.0
CMS1_k127_3096970_1 segregation and condensation protein K06024 - - 0.0000000000000000000000000000000004963 138.0
CMS1_k127_3096970_2 PFAM ribosomal protein S8E K02995 - - 0.0000000000000000000000000001775 118.0
CMS1_k127_3096970_3 chromosome segregation and condensation protein ScpA K05896 - - 0.000000002303 67.0
CMS1_k127_3149704_0 B12 binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002824 323.0
CMS1_k127_3149704_1 Iron-sulfur cluster-binding domain - - - 0.00000000000000000000000000000000000000000000000000000001507 211.0
CMS1_k127_3149704_2 PQQ enzyme repeat K05889,K12132 - 1.1.2.6,2.7.11.1 0.000000000000000000000000000000000000000000000000001259 208.0
CMS1_k127_3149704_3 Belongs to the anaerobic coproporphyrinogen-III oxidase family K02495 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006782,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016491,GO:0016627,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0046501,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0051989,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 1.3.98.3 0.0000000000000000000000001271 114.0
CMS1_k127_3149704_4 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K17713 - - 0.000001914 61.0
CMS1_k127_3150860_0 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 GO:0000096,GO:0003674,GO:0003824,GO:0004013,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009069,GO:0009116,GO:0009119,GO:0009987,GO:0016787,GO:0016801,GO:0016802,GO:0017144,GO:0019752,GO:0033353,GO:0034641,GO:0042278,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046128,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564,GO:1901605,GO:1901657 3.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001226 537.0
CMS1_k127_3150860_1 Involved in regulation of DNA replication K10725 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001346 396.0
CMS1_k127_3150860_2 Possesses two activities a DNA synthesis (polymerase) and an exonucleolytic activity that degrades single-stranded DNA in the 3' to 5' direction. Has a template-primer preference which is characteristic of a replicative DNA polymerase K02323 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006255 356.0
CMS1_k127_3150860_3 AAA domain K07028 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002439 314.0
CMS1_k127_3150860_4 PHP domain K07053 - 3.1.3.97 0.00000000000000000000000000000000000000000002494 172.0
CMS1_k127_3150860_5 Phosphate uptake regulator - - - 0.000000000000000000000000000000005467 140.0
CMS1_k127_3150860_6 Orotidine-5-phosphate decarboxylase orotate phosphoribosyltransferase K01591,K13421 - 2.4.2.10,4.1.1.23 0.00000000000000000000000000006203 125.0
CMS1_k127_3150860_7 HTH DNA binding domain - - - 0.00000000003209 68.0
CMS1_k127_3150860_8 AAA domain K07028 - - 0.000003205 56.0
CMS1_k127_3212118_0 metallochaperone-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001202 571.0
CMS1_k127_3212118_1 peptidase - - - 0.000000000000000000000000000000000000000000001254 175.0
CMS1_k127_3212118_2 protein conserved in archaea - - - 0.0000000000000000000000000000000000244 141.0
CMS1_k127_3212118_3 Siderophore-interacting protein - - - 0.00001138 54.0
CMS1_k127_3213119_0 CoA binding domain K01905,K09181,K22224 - 6.2.1.13 1.157e-219 702.0
CMS1_k127_3213119_1 Oxidoreductase NAD-binding domain K15765 - 1.18.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003598 598.0
CMS1_k127_3213119_2 PFAM Nickel-dependent hydrogenase, large subunit K00436,K14126,K17993 - 1.12.1.2,1.12.1.3,1.12.1.5,1.8.98.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003799 539.0
CMS1_k127_3213119_3 Stabilizes TBP binding to an archaeal box-A promoter. Also responsible for recruiting RNA polymerase II to the pre- initiation complex (DNA-TBP-TFIIB) K03124 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002056 353.0
CMS1_k127_3213119_4 NADH ubiquinone oxidoreductase, 20 Kd subunit K14128 - 1.8.98.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008919 313.0
CMS1_k127_3213119_5 Belongs to the SUI1 family K03113 - - 0.0000000000000000000000000000000938 128.0
CMS1_k127_3213119_6 HAD-hyrolase-like K07025 - - 0.0002962 43.0
CMS1_k127_3215889_0 Belongs to the precorrin methyltransferase family K02303 GO:0003674,GO:0003824,GO:0004851,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008169,GO:0008757,GO:0009058,GO:0009987,GO:0016740,GO:0016741,GO:0018130,GO:0019354,GO:0019438,GO:0032259,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0046148,GO:0046156,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.1.107 0.000000000000000000000000000000000000000000000004328 176.0
CMS1_k127_3215889_1 PFAM Tetrapyrrole (Corrin Porphyrin) Methylases K01719,K13542 - 2.1.1.107,4.2.1.75 0.0000000000000000000262 101.0
CMS1_k127_3217685_0 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001155 429.0
CMS1_k127_3217685_1 DNA-dependent ATPase and 3'-5' DNA helicase that may be involved in repair of stalled replication forks K03726 - - 0.0000000000000000000000000000000000000000000000000003288 189.0
CMS1_k127_3217685_2 Suf system fes assembly protein K04488,K11717 - 2.8.1.7,4.4.1.16 0.000000000000000000000000000000000000000000000000006658 186.0
CMS1_k127_3225743_0 PFAM type II secretion system protein E K07332 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002228 541.0
CMS1_k127_3225743_1 PFAM type II secretion system K07333 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001645 329.0
CMS1_k127_3225743_2 ATP-grasp domain K22224 - 6.2.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000002958 259.0
CMS1_k127_323070_0 Nickel-dependent hydrogenase K14126 - 1.8.98.5 8.138e-199 629.0
CMS1_k127_323070_1 PFAM NADH ubiquinone oxidoreductase, 20 kDa subunit K14128 - 1.8.98.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001195 364.0
CMS1_k127_323070_2 Alcohol dehydrogenase GroES-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001099 291.0
CMS1_k127_323070_3 Heterodisulfide reductase subunit B K03389 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.00000000000000000000000000000000000000000000000000000000000000000000000006831 259.0
CMS1_k127_323070_4 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304,K12267 - 1.8.4.11,1.8.4.12 0.0000000000000000000000000000000000000000000000000000000009688 204.0
CMS1_k127_323070_5 Nitroreductase family - - - 0.00000000000000000000000000000000000000000002861 168.0
CMS1_k127_323070_6 Cupin domain - - - 0.000000000000000000000000000000000000003839 148.0
CMS1_k127_323070_7 heterodisulfide reductase subunit C K03390 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.000000000000000000000000001262 119.0
CMS1_k127_323070_8 - - - - 0.000000000000000000001022 97.0
CMS1_k127_3234250_0 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007 - 2.7.9.2 8.468e-273 862.0
CMS1_k127_3234250_1 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY K03106 - 3.6.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001123 472.0
CMS1_k127_3234250_10 Putative RNA methylase family UPF0020 - - - 0.000000000000000000000000000000002644 144.0
CMS1_k127_3234250_11 Belongs to the eukaryotic ribosomal protein eL21 family K02889 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000007793 97.0
CMS1_k127_3234250_12 RNA polymerase Rpb4 K03051 - 2.7.7.6 0.000000000000000008435 87.0
CMS1_k127_3234250_2 Responsible for synthesis of pseudouridine from uracil- 54 and uracil-55 in the psi GC loop of transfer RNAs K07583 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002868 331.0
CMS1_k127_3234250_3 Diphthamide K07561 - 2.5.1.108 0.00000000000000000000000000000000000000000000000000000000000000000000000000004107 270.0
CMS1_k127_3234250_4 Cytidine and deoxycytidylate deaminase zinc-binding region K01493 - 3.5.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000419 244.0
CMS1_k127_3234250_5 Protein of unknown function (DUF655) K07572 - - 0.00000000000000000000000000000000000000000000000000002464 193.0
CMS1_k127_3234250_6 Pfam:Methyltransf_26 K02493 - 2.1.1.297 0.00000000000000000000000000000000000000000004218 167.0
CMS1_k127_3234250_7 Methyltransferase K07579 - - 0.0000000000000000000000000000000000000006868 155.0
CMS1_k127_3234250_8 Belongs to the universal ribosomal protein uL16 family K02866 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000001327 153.0
CMS1_k127_3234250_9 Specifically dimethylates two adjacent adenosines in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 GO:0000154,GO:0000179,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.182 0.00000000000000000000000000000000000004039 153.0
CMS1_k127_3253196_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001678 482.0
CMS1_k127_3253196_1 Catalyzes the formation of CDP-2,3-bis-(O- geranylgeranyl)-sn-glycerol (CDP-archaeol) from 2,3-bis-(O- geranylgeranyl)-sn-glycerol 1-phosphate (DGGGP) and CTP. This reaction is the third ether-bond-formation step in the biosynthesis of archaeal membrane lipids K19664 - 2.7.7.67 0.00000000000000000000000000000000005128 139.0
CMS1_k127_3253196_2 Involved in DNA repair and in homologous recombination. May regulate the cleavage reactions of the branch-structured DNA. Has a very weak ATPase activity that is not stimulated by DNA. Binds DNA but does not promote DNA strands exchange K04484 - - 0.00000000000000000000000000001205 126.0
CMS1_k127_3253196_3 - - - - 0.000000001229 67.0
CMS1_k127_3253196_4 DNA topoisomerase, type IA, central domain protein K03168,K03169 - 5.99.1.2 0.000002231 52.0
CMS1_k127_326343_0 PFAM ATP-binding region ATPase domain protein - - - 0.000000000000000000009675 93.0
CMS1_k127_326343_1 E3 ubiquitin ligase K16276 - - 0.0000006321 57.0
CMS1_k127_3264611_0 PFAM TCP-1 cpn60 chaperonin family K22447 - - 3.423e-207 658.0
CMS1_k127_3264611_1 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K06001 - 4.2.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002752 596.0
CMS1_k127_3264611_2 PFAM ATP-NAD AcoX kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008023 321.0
CMS1_k127_3264611_3 PFAM amidohydrolase K01464,K01465,K01466 - 3.5.2.2,3.5.2.3,3.5.2.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003929 304.0
CMS1_k127_3264611_4 regulator of amino acid metabolism, contains ACT domain K07103 - - 0.000000000000000000000000000000000000000006179 161.0
CMS1_k127_3264611_5 Mut7-C RNAse domain K09122 - - 0.0000000000000000000000000000009855 125.0
CMS1_k127_3264611_6 PFAM CBS domain containing protein - - - 0.00000000000000000000000000009488 122.0
CMS1_k127_3264611_7 Cyclophilin-like K09143 - - 0.0000000000000000000000476 102.0
CMS1_k127_3264611_8 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03014 - - 0.00000000000000001157 86.0
CMS1_k127_3268396_0 Catalyzes the condensation of formaldehyde with tetrahydromethanopterin (H(4)MPT) to 5,10- methylenetetrahydromethanopterin K13812 - 4.1.2.43,4.2.1.147 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002775 460.0
CMS1_k127_3268396_1 Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues K01299 - 3.4.17.19 0.0000000000000000000000000000001938 125.0
CMS1_k127_33112_0 PFAM Thiamine pyrophosphate enzyme, C-terminal TPP-binding K00158 - 1.2.3.3 2.535e-246 773.0
CMS1_k127_33112_1 Belongs to the class-II aminoacyl-tRNA synthetase family K01868 - 6.1.1.3 3.69e-226 717.0
CMS1_k127_33112_10 Involved in the catabolism of quinolinic acid (QA) K00767 - 2.4.2.19 0.0000000000000000000000000000000000000000000000000000000000000000000000001093 258.0
CMS1_k127_33112_11 AMMECR1 K09141 - - 0.000000000000000000000000000000000000000000000000000000000000000000003264 240.0
CMS1_k127_33112_12 Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit K02427 GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0009451,GO:0009987,GO:0016070,GO:0016740,GO:0016741,GO:0032259,GO:0034641,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:1901360 2.1.1.166 0.00000000000000000000000000000000000000000000000000000000000005954 219.0
CMS1_k127_33112_13 serine threonine protein kinase K08851 GO:0000408,GO:0002949,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070525,GO:0071704,GO:0090304,GO:1901360 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000001504 211.0
CMS1_k127_33112_14 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.0000000000000000000000000000000000000000000000000000000007637 208.0
CMS1_k127_33112_15 Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation K03433 - 3.4.25.1 0.00000000000000000000000000000000000000000000000000000001496 205.0
CMS1_k127_33112_16 Nicotinamide-nucleotide adenylyltransferase K00952 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.7.7.1 0.00000000000000000000000000000000000000000000000000001905 193.0
CMS1_k127_33112_17 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000002544 187.0
CMS1_k127_33112_19 Belongs to the HAM1 NTPase family K02428 - 3.6.1.66 0.00000000000000000000000000000000000000000000004543 176.0
CMS1_k127_33112_2 DegT/DnrJ/EryC1/StrS aminotransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005552 464.0
CMS1_k127_33112_20 TIGRFAM geranylgeranyl reductase - - - 0.000000000000000000000000000000000000000000001084 181.0
CMS1_k127_33112_21 ribosomal protein S15 K02956 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0019843,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070181,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000003964 153.0
CMS1_k127_33112_22 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K04794 - 3.1.1.29 0.0000000000000000000000000000000000000004083 152.0
CMS1_k127_33112_23 Activates the tRNA-splicing ligase complex by facilitating the enzymatic turnover of catalytic subunit RtcB. Acts by promoting the guanylylation of RtcB, a key intermediate step in tRNA ligation. Can also alter the NTP specificity of RtcB such that ATP, dGTP or ITP is used efficiently - - - 0.000000000000000000000000000000353 129.0
CMS1_k127_33112_24 Acylphosphatase K01512 - 3.6.1.7 0.0000000000000000000000000002561 116.0
CMS1_k127_33112_25 Phosphomethylpyrimidine kinase - - - 0.00000000000000000000000002958 119.0
CMS1_k127_33112_26 COG1522 Transcriptional regulators - - - 0.00000000000000000000000003505 114.0
CMS1_k127_33112_27 PFAM Glycosyltransferase 28 domain - - - 0.00000000000000000000009903 111.0
CMS1_k127_33112_28 3-methyladenine DNA glycosylase K01246 - 3.2.2.20 0.0000000000000000000001035 103.0
CMS1_k127_33112_29 Protein of unknown function (DUF4152) - - - 0.00000000000000000002444 99.0
CMS1_k127_33112_3 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is a component of the KEOPS complex that is probably involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37. The Kae1 domain likely plays a direct catalytic role in this reaction. The Bud32 domain probably displays kinase activity that regulates Kae1 function K15904 - 2.3.1.234,2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002611 386.0
CMS1_k127_33112_30 Methyl-viologen-reducing hydrogenase, delta subunit - - - 0.000000000000001083 85.0
CMS1_k127_33112_31 transcriptional regulator PadR family - - - 0.00000000000007507 79.0
CMS1_k127_33112_32 6-O-methylguanine DNA methyltransferase, DNA binding domain K00567 - 2.1.1.63 0.0000000000001462 78.0
CMS1_k127_33112_33 - - - - 0.0000000001163 64.0
CMS1_k127_33112_34 - - - - 0.0000000001611 69.0
CMS1_k127_33112_35 - - - - 0.0000000006841 62.0
CMS1_k127_33112_4 PFAM ABC transporter related K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002683 376.0
CMS1_k127_33112_5 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006136 374.0
CMS1_k127_33112_6 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004973 336.0
CMS1_k127_33112_7 COG0608 Single-stranded DNA-specific exonuclease K07463 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002267 321.0
CMS1_k127_33112_8 Could be responsible for synthesis of pseudouridine from uracil-13 in transfer RNAs K06176 - 5.4.99.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009822 306.0
CMS1_k127_33112_9 Thioredoxin reductase K00384,K03387 - 1.8.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002291 292.0
CMS1_k127_3336824_0 Radical SAM domain protein K01012 - 2.8.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001614 312.0
CMS1_k127_3336824_1 GHMP kinases N terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000006103 231.0
CMS1_k127_3336824_2 Belongs to the alpha-IPM synthase homocitrate synthase family K01649 - 2.3.3.13 0.00000000000000000000000000000000000000000000000000000000007431 218.0
CMS1_k127_3336824_3 Protein of unknown function (DUF447) K09154 - - 0.0000000000002092 78.0
CMS1_k127_3336824_4 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995 - 2.7.8.5 0.000000000002353 69.0
CMS1_k127_3345961_0 PFAM Thiamine pyrophosphate K00170 - 1.2.7.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003851 382.0
CMS1_k127_3345961_1 PFAM pyruvate flavodoxin ferredoxin oxidoreductase domain protein K00169 - 1.2.7.1 0.00000000168 59.0
CMS1_k127_3345961_2 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.00000005286 63.0
CMS1_k127_3345961_3 TIGRFAM cation diffusion facilitator family transporter - - - 0.0000004161 60.0
CMS1_k127_3392413_0 Catalytic subunit of DNA primase, an RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. The small subunit contains the primase catalytic core and has DNA synthesis activity on its own. Binding to the large subunit stabilizes and modulates the activity, increasing the rate of DNA synthesis while decreasing the length of the DNA fragments, and conferring RNA synthesis capability. The DNA polymerase activity may enable DNA primase to also catalyze primer extension after primer synthesis. May also play a role in DNA repair - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001008 253.0
CMS1_k127_3392413_1 Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions - - - 0.000000000000000000000000000000000000002574 149.0
CMS1_k127_3405768_0 PFAM Amidohydrolase 3 K00200 - 1.2.7.12 2.296e-196 627.0
CMS1_k127_3405768_1 Formylmethanofuran dehydrogenase, subunit B K00201 - 1.2.7.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001839 473.0
CMS1_k127_3405768_2 PFAM glutamate synthase alpha subunit domain protein K00202 - 1.2.7.12 0.00000000000000000000000000000000000000000000001352 181.0
CMS1_k127_3405768_3 FdhD/NarQ family K02379 - - 0.000000000000000000000000000000000003203 146.0
CMS1_k127_3405768_4 PFAM molydopterin dinucleotide-binding region K00203 - 1.2.7.12 0.00000000000000000000000000000114 126.0
CMS1_k127_3411574_0 Ferrous iron transport protein B K04759 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002842 423.0
CMS1_k127_3411574_1 Multicopper oxidase K06324 - 1.16.3.3 0.0000000000000000000000000000000000000000000000000005045 187.0
CMS1_k127_3411574_2 PFAM Multicopper oxidase - - - 0.000000000000000000000000004932 119.0
CMS1_k127_3460490_0 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001859 337.0
CMS1_k127_3460490_1 PFAM glycosidase related protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005022 288.0
CMS1_k127_3460490_2 Highly conserved protein containing a thioredoxin domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000009603 274.0
CMS1_k127_3460490_3 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000007296 174.0
CMS1_k127_3460490_4 PFAM CBS domain - - - 0.00000000000000000000009731 102.0
CMS1_k127_3502706_0 Catalytic subunit of DNA primase, an RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. The small subunit contains the primase catalytic core and has DNA synthesis activity on its own. Binding to the large subunit stabilizes and modulates the activity, increasing the rate of DNA synthesis while decreasing the length of the DNA fragments, and conferring RNA synthesis capability. The DNA polymerase activity may enable DNA primase to also catalyze primer extension after primer synthesis. May also play a role in DNA repair K02683 GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0003896,GO:0003899,GO:0005488,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006269,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901363,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000004182 239.0
CMS1_k127_3502706_1 Belongs to the UPF0215 family K09120 - - 0.000000000000000000000000000000000000000000000000000006457 196.0
CMS1_k127_3502706_2 Belongs to the archaeal rpoM eukaryotic RPA12 RPB9 RPC11 RNA polymerase family K03057 GO:0003674,GO:0005488,GO:0006355,GO:0008150,GO:0008270,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0043167,GO:0043169,GO:0046872,GO:0046914,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:1903506,GO:2000112,GO:2001141 - 0.00000000000000000000000005552 111.0
CMS1_k127_3502706_3 Glycosyltransferase like family 2 K00721 - 2.4.1.83 0.00000000000000000000009116 101.0
CMS1_k127_3502706_4 - - - - 0.00000000000002077 85.0
CMS1_k127_3502706_5 protein conserved in archaea K09723 - - 0.000000001414 67.0
CMS1_k127_3536196_0 Fumarase C C-terminus K01744 - 4.3.1.1 0.00000000000000000000000000000000000000000000002301 174.0
CMS1_k127_3536196_1 transcriptional - - - 0.0000000002981 70.0
CMS1_k127_3536196_2 transcriptional - - - 0.0000005483 56.0
CMS1_k127_3611203_0 transferase activity, transferring glycosyl groups K13693,K21349 - 2.4.1.266,2.4.1.268 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008252 327.0
CMS1_k127_3611203_1 PFAM Conserved TM helix repeat-containing protein - - - 0.0000000003295 63.0
CMS1_k127_3622231_0 PFAM Cl- channel voltage-gated family protein K03281 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001502 562.0
CMS1_k127_3622231_1 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001477 358.0
CMS1_k127_3622231_2 AIR synthase related protein domain protein K01933 - 6.3.3.1 0.00000000000000000000000000000000000000000000000000000000000559 221.0
CMS1_k127_3622231_3 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.00000000003266 66.0
CMS1_k127_3634041_0 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) K03110 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002402 316.0
CMS1_k127_3634041_1 Binds to the 50S ribosomal subunit and prevents its association with the 30S ribosomal subunit to form the 70S initiation complex K03264 - - 0.0000000000000000000000000000000000000000724 159.0
CMS1_k127_3634041_2 COG0531 Amino acid transporters - - - 0.00000000000000000000000000000000005081 151.0
CMS1_k127_3634041_3 Molecular chaperone capable of stabilizing a range of proteins. Seems to fulfill an ATP-independent, HSP70-like function in archaeal de novo protein folding K04797 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0016272,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0032991,GO:0044424,GO:0044464,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:1903506,GO:2000112,GO:2001141 - 0.00000000000000000321 90.0
CMS1_k127_3634041_4 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.0000000000004685 75.0
CMS1_k127_3634041_5 rRNA binding K02944 - - 0.000000000006072 68.0
CMS1_k127_3639502_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004413 315.0
CMS1_k127_3639502_1 PFAM periplasmic binding protein K02016 - - 0.00000000000000000000000000001872 123.0
CMS1_k127_3639502_2 - K00960 - 2.7.7.6 0.000000000000001004 77.0
CMS1_k127_3639502_3 - - - - 0.00000000000002216 82.0
CMS1_k127_3639502_4 PFAM nucleic acid binding, OB-fold, tRNA helicase-type K07466 - - 0.0000000000008975 77.0
CMS1_k127_3639502_5 - - - - 0.00000001255 63.0
CMS1_k127_3670097_0 Zn-dependent protease with chaperone function K03799 - - 0.0000000000000000000000000000000000000000000000000000000000000001441 232.0
CMS1_k127_3670097_1 ubiE/COQ5 methyltransferase family - - - 0.00000000000000000000000000002241 126.0
CMS1_k127_3679113_0 pyruvate flavodoxin ferredoxin oxidoreductase K00174 - 1.2.7.11,1.2.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001637 548.0
CMS1_k127_3679113_1 TIGRFAM Ammonium transporter K03320 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002894 420.0
CMS1_k127_3679113_10 Transcriptional regulator - - - 0.00000000088 67.0
CMS1_k127_3679113_11 Rubrerythrin K03594 - 1.16.3.1 0.000000001529 69.0
CMS1_k127_3679113_2 Ammonium Transporter Family K03320 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001806 409.0
CMS1_k127_3679113_3 hydroxylamine reductase activity K05601 GO:0000302,GO:0003674,GO:0003824,GO:0004601,GO:0006807,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009636,GO:0009987,GO:0010035,GO:0016209,GO:0016491,GO:0016661,GO:0016684,GO:0042221,GO:0042493,GO:0042542,GO:0046677,GO:0050418,GO:0050896,GO:0051716,GO:0055114,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1901700,GO:1990748 1.7.99.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001551 333.0
CMS1_k127_3679113_4 Directs the termination of nascent peptide synthesis (translation) in response to the termination codons UAA, UAG and UGA K03265 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000009416 284.0
CMS1_k127_3679113_5 metal-dependent membrane protease K07052 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001249 256.0
CMS1_k127_3679113_6 Beta-galactosidase - - - 0.000000000000000000000000000001084 133.0
CMS1_k127_3679113_7 ferroxidase activity K03594 GO:0006873,GO:0006875,GO:0006879,GO:0006880,GO:0008150,GO:0009987,GO:0019725,GO:0030003,GO:0042592,GO:0046916,GO:0048878,GO:0050801,GO:0051179,GO:0051235,GO:0051238,GO:0051641,GO:0051651,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0065007,GO:0065008,GO:0097577,GO:0098771 1.16.3.1 0.00000000000000000000008666 109.0
CMS1_k127_3679113_8 Pyridoxamine 5'-phosphate oxidase K07005 - - 0.00000000000000000006567 94.0
CMS1_k127_3679113_9 Protein of unknown function (DUF996) - - - 0.0000000000003283 79.0
CMS1_k127_3700935_0 PFAM Aminotransferase class I and II K10206 - 2.6.1.83 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001056 395.0
CMS1_k127_3700935_1 M42 glutamyl aminopeptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006624 362.0
CMS1_k127_3700935_2 Radical SAM domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002773 274.0
CMS1_k127_3700935_3 Small conductance mechanosensitive ion channel, MscS family K03442,K16052,K22044 - - 0.00000000000000000000000000000000000000000000000000000000000008809 226.0
CMS1_k127_3700935_4 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.00000000000000000000000000000000000000000000002498 174.0
CMS1_k127_3700935_5 Methylene-tetrahydromethanopterin dehydrogenase K10714 - - 0.0000000000000000000000000000000007507 143.0
CMS1_k127_3700935_6 general stress protein B in uncultured methanogenic archaeon (Q0W564) - - - 0.00000000000000000005439 93.0
CMS1_k127_3707457_0 PFAM regulatory protein AsnC Lrp family - - - 0.00000000000000000000000000000000000001271 149.0
CMS1_k127_3707457_1 Binds double-stranded DNA tightly but without sequence specificity. It is distributed uniformly and abundantly on the chromosome, suggesting a role in chromatin architecture. However, it does not significantly compact DNA. Binds rRNA and mRNA in vivo. May play a role in maintaining the structural and functional stability of RNA, and, perhaps, ribosomes K03622 - - 0.000000000000000000000000001369 114.0
CMS1_k127_3707457_2 Transcription elongation factor - - - 0.00000000000000000000015 105.0
CMS1_k127_3707457_3 Belongs to the eukaryotic ribosomal protein eL40 family K02927 - - 0.00000000002643 64.0
CMS1_k127_3707457_4 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K09759 - 6.1.1.23 0.00001359 48.0
CMS1_k127_3710681_0 ABC-type multidrug transport system, ATPase component K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004613 427.0
CMS1_k127_3710681_1 Cation transporter/ATPase, N-terminus K01531 - 3.6.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002721 350.0
CMS1_k127_3710681_2 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000000000000000000000423 199.0
CMS1_k127_3710681_3 COG1599 Single-stranded DNA-binding replication protein A (RPA), large (70 kD) subunit and related ssDNA-binding proteins K07466 - - 0.00000000000000000001935 93.0
CMS1_k127_3710681_4 PadR family transcriptional regulator - - - 0.0000000003836 65.0
CMS1_k127_3710681_5 - - - - 0.000004376 52.0
CMS1_k127_3728563_0 - - - - 0.00000000000000000000000000000000000000000000000000000000001104 213.0
CMS1_k127_3728563_1 PFAM Radical SAM domain protein K22227 - - 0.000000000000000000000000000000000000001467 149.0
CMS1_k127_3728563_2 endonuclease containing a URI domain K07461 - - 0.00000000000000000000746 94.0
CMS1_k127_3728563_3 PFAM Haloacid dehalogenase domain protein hydrolase K01079 - 3.1.3.3 0.0000000000000003339 91.0
CMS1_k127_3728563_4 PFAM phosphatidate cytidylyltransferase - - - 0.000000000001821 79.0
CMS1_k127_3731081_0 Fumarate reductase flavoprotein C-term K00239 - 1.3.5.1,1.3.5.4 1.172e-201 641.0
CMS1_k127_3731081_1 Fumarase C C-terminus K01679,K01744 - 4.2.1.2,4.3.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005282 533.0
CMS1_k127_3731081_2 TIGRFAM succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 - 1.3.5.1,1.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000007004 262.0
CMS1_k127_3778219_0 MGS-like domain K01955 - 6.3.5.5 0.0 1187.0
CMS1_k127_3778219_1 PFAM CBS domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001147 575.0
CMS1_k127_3778219_2 Catalyzes a transaldol reaction between 6-deoxy-5- ketofructose 1-phosphate (DKFP) and L-aspartate semialdehyde (ASA) with an elimination of hydroxypyruvaldehyde phosphate to yield 2- amino-3,7-dideoxy-D-threo-hept-6-ulosonate (ADH). Plays a key role in an alternative pathway of the biosynthesis of 3-dehydroquinate (DHQ), which is involved in the canonical pathway for the biosynthesis of aromatic amino acids K16306 - 2.2.1.10,4.1.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001267 297.0
CMS1_k127_3778219_3 Belongs to the aspartokinase family K00928 - 2.7.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000183 268.0
CMS1_k127_3778219_4 Belongs to the CarA family K01956 - 6.3.5.5 0.000000000000000000000000000000000000000000000000000000000000000002287 233.0
CMS1_k127_3778219_5 PFAM ApbE family K09740 - - 0.00000000000000000000000000000001102 136.0
CMS1_k127_3778219_6 4Fe-4S ferredoxin iron-sulfur binding - - - 0.00000000000000000000816 97.0
CMS1_k127_3791923_0 PFAM ABC transporter K02003,K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002805 246.0
CMS1_k127_3791923_1 PFAM peptidase S1 and S6, chymotrypsin Hap K08070 - 1.3.1.74 0.00000000000000000000000000000000000000000000000000000004856 211.0
CMS1_k127_3791923_2 ABC-type transport system involved in lipoprotein release permease component K02004 - - 0.00000000000000004678 94.0
CMS1_k127_3796058_0 TIGRFAM glutamine synthetase, type I K01915 - 6.3.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008469 454.0
CMS1_k127_3796058_1 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 - 5.3.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001225 349.0
CMS1_k127_3796058_10 tRNA intron endonuclease, N-terminal domain K01170 - 4.6.1.16 0.000000000000000000000000000003029 128.0
CMS1_k127_3796058_11 Transcriptional regulator K07722 - - 0.000000000000000000000000000006406 124.0
CMS1_k127_3796058_12 Uncharacterised protein family (UPF0113) K07565 - - 0.0000139 54.0
CMS1_k127_3796058_13 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00002545 56.0
CMS1_k127_3796058_2 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005242 324.0
CMS1_k127_3796058_3 Methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004287 310.0
CMS1_k127_3796058_4 PFAM tRNA synthetase, class II (G, H, P and S) K01892 - 6.1.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007031 308.0
CMS1_k127_3796058_5 Predicted metal-binding protein (DUF2284) - - - 0.0000000000000000000000000000000000000000000000000000000003829 208.0
CMS1_k127_3796058_6 Phosphoribosyl transferase domain K00759,K09685 - 2.4.2.7 0.00000000000000000000000000000000000000000000000000002126 196.0
CMS1_k127_3796058_7 Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB NOP family - - - 0.0000000000000000000000000000000000000000000000000008403 194.0
CMS1_k127_3796058_8 Belongs to the LDH MDH superfamily K00024 - 1.1.1.37 0.000000000000000000000000000000000000000000005966 168.0
CMS1_k127_3796058_9 Transcriptional regulator - - - 0.0000000000000000000000000000000000283 138.0
CMS1_k127_3798867_0 PFAM Cys Met metabolism pyridoxal-phosphate-dependent protein K01740 - 2.5.1.49 1.251e-209 658.0
CMS1_k127_3798867_1 Cation transporter/ATPase, N-terminus K01531 - 3.6.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005433 585.0
CMS1_k127_3798867_10 PFAM 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.00000000000000000000000000000008222 130.0
CMS1_k127_3798867_11 PFAM 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.00000000000000000000000000001247 124.0
CMS1_k127_3798867_12 cell redox homeostasis K09584 - 5.3.4.1 0.0000000004698 64.0
CMS1_k127_3798867_13 Transcriptional regulator K07108 - - 0.000000007785 61.0
CMS1_k127_3798867_14 Molybdopterin converting factor, small subunit K03636 - - 0.0006811 46.0
CMS1_k127_3798867_2 Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine K00641 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004414,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008374,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009069,GO:0009086,GO:0009092,GO:0009987,GO:0016053,GO:0016407,GO:0016413,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.3.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001362 539.0
CMS1_k127_3798867_3 Aldehyde ferredoxin oxidoreductase, N-terminal domain K03738 - 1.2.7.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002498 443.0
CMS1_k127_3798867_4 Aldehyde ferredoxin oxidoreductase, N-terminal domain K03738 - 1.2.7.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004084 438.0
CMS1_k127_3798867_5 phosphoglycerate mutase K15635 - 5.4.2.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003977 416.0
CMS1_k127_3798867_6 Creatinase/Prolidase N-terminal domain K01271 - 3.4.13.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000003771 274.0
CMS1_k127_3798867_7 SMART zinc finger, CDGSH-type domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000005998 250.0
CMS1_k127_3798867_8 Methionine biosynthesis protein MetW - - - 0.00000000000000000000000000000000000000000000000000000000000001113 222.0
CMS1_k127_3798867_9 Transcriptional regulator - - - 0.00000000000000000000000000000004969 131.0
CMS1_k127_3804142_0 PFAM Radical SAM domain protein K06937 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002168 534.0
CMS1_k127_3804142_1 Archaeal transcriptional regulator TrmB - - - 0.000000000000000000000000000000000000000000006345 172.0
CMS1_k127_3804142_2 Hydrolase, TatD family K03424 - - 0.000000000000002815 79.0
CMS1_k127_3804142_3 Binds and compact DNA (95 to 150 base pairs) to form nucleosome-like structures that contain positive DNA supercoils. Increases the resistance of DNA to thermal denaturation - - - 0.000000000000005861 76.0
CMS1_k127_3804142_4 S25 ribosomal protein K02975 - - 0.00000002714 59.0
CMS1_k127_3807790_0 Radical_SAM C-terminal domain K07739 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.3.1.48 0.00000000000000000000000000000000000000000000000000000000000461 215.0
CMS1_k127_3807790_1 PFAM low molecular weight phosphotyrosine protein phosphatase K03741 - 1.20.4.1 0.000000000000000000000000000000000003709 140.0
CMS1_k127_3807790_2 4Fe-4S binding domain - - - 0.0000000000000000000003764 99.0
CMS1_k127_3807790_3 PFAM regulatory protein, ArsR K03892,K21903 - - 0.0000000000000001575 83.0
CMS1_k127_3807790_4 PFAM Ribosomal protein S30 K02983 - - 0.00000001553 57.0
CMS1_k127_3853045_0 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005634 479.0
CMS1_k127_3853045_1 - - - - 0.00000000000000000000000000000000000000000002869 171.0
CMS1_k127_3853045_2 Suf system fes assembly protein K04488,K11717 - 2.8.1.7,4.4.1.16 0.000000000000000000000000005351 113.0
CMS1_k127_3853045_3 Glycosyl transferase family 2 - - - 0.0000000000000000000345 94.0
CMS1_k127_3881627_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000948 471.0
CMS1_k127_3881627_1 Major Facilitator Superfamily K08177 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002606 374.0
CMS1_k127_3881627_2 GPR1 FUN34 yaaH family K07034 - - 0.00000000000000000000000000000000000000000000000000000000000000000001078 239.0
CMS1_k127_3887317_0 Involved in allosteric regulation of aspartate carbamoyltransferase K00610 - - 0.00000000000000000000000000000000000000000001894 166.0
CMS1_k127_3887317_1 TrkA-C domain protein - - - 0.0000000000000000106 95.0
CMS1_k127_3887317_2 PFAM Uncharacterised protein family (UPF0153) K06940 - - 0.000000007143 62.0
CMS1_k127_3887317_3 RDD family - - - 0.00000002131 62.0
CMS1_k127_389278_0 DeoC/LacD family aldolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004038 373.0
CMS1_k127_389278_1 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain K19802 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0016854,GO:0034641,GO:0043167,GO:0043169,GO:0043603,GO:0044237,GO:0046872,GO:0071704,GO:1901564 5.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001455 309.0
CMS1_k127_389278_2 Alcohol dehydrogenase GroES-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000002242 221.0
CMS1_k127_389278_3 Zinc carboxypeptidase - - - 0.0000000000000000000000000000000000000000000000000000000004229 220.0
CMS1_k127_389278_4 FR47-like protein - - - 0.000000008607 63.0
CMS1_k127_3902631_0 associated with various cellular activities K03695,K03696 - - 2.387e-230 720.0
CMS1_k127_3902631_1 membrane-associated protein domain - - - 0.0003933 50.0
CMS1_k127_3925248_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007657 380.0
CMS1_k127_3925248_1 MoeA domain protein domain I and II K03750 - 2.10.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003751 288.0
CMS1_k127_3925248_2 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000006072 244.0
CMS1_k127_3925248_3 Oligosaccharyl transferase STT3 subunit K07151 - 2.4.99.18 0.000000000000000000000000000000000000000000000000000000003811 225.0
CMS1_k127_3925248_4 Glycosyl transferase family 4 K01001 GO:0003674,GO:0003824,GO:0003975,GO:0003976,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0006040,GO:0006047,GO:0006066,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006488,GO:0006489,GO:0006490,GO:0006629,GO:0006644,GO:0006720,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0012505,GO:0016020,GO:0016021,GO:0016043,GO:0016093,GO:0016094,GO:0016740,GO:0016772,GO:0016780,GO:0019348,GO:0019408,GO:0019538,GO:0019637,GO:0022607,GO:0030176,GO:0031224,GO:0031227,GO:0031984,GO:0034641,GO:0034645,GO:0036211,GO:0042175,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043413,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0046165,GO:0046465,GO:0046483,GO:0051259,GO:0055086,GO:0065003,GO:0070085,GO:0071704,GO:0071840,GO:0090407,GO:0098827,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 2.7.8.15 0.0000000000009265 79.0
CMS1_k127_3925248_5 ubiE/COQ5 methyltransferase family - - - 0.0001485 52.0
CMS1_k127_3925248_6 - - - - 0.0003215 45.0
CMS1_k127_3947946_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01883,K15526 GO:0000166,GO:0001871,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009986,GO:0009987,GO:0010125,GO:0010126,GO:0010467,GO:0016020,GO:0016070,GO:0016137,GO:0016138,GO:0016874,GO:0016875,GO:0016879,GO:0016880,GO:0017076,GO:0019538,GO:0019752,GO:0030246,GO:0030247,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035446,GO:0035639,GO:0036094,GO:0040007,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044272,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901135,GO:1901137,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659,GO:2001065 6.1.1.16,6.3.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001567 568.0
CMS1_k127_3947946_1 MiaB-like tRNA modifying enzyme K15865 - 2.8.4.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001292 325.0
CMS1_k127_3947946_2 PFAM DNA alkylation repair enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001281 309.0
CMS1_k127_3947946_3 Thiamine biosynthesis protein (ThiI) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000009388 299.0
CMS1_k127_3947946_4 Ribose-phosphate pyrophosphokinase K00948 - 2.7.6.1 0.00000000000000000000000000000000000000000000000000000000000000528 226.0
CMS1_k127_3947946_5 Lysine 2,3-aminomutase YodO family protein K01843 - 5.4.3.2 0.00000000000000000000000000000000000000000000000000000000004529 208.0
CMS1_k127_3947946_6 methylase K07446 - 2.1.1.213 0.0000000000000000000000000000000000000000000000000000000275 210.0
CMS1_k127_3947946_7 PFAM Biotin lipoate A B protein ligase family K03800 - 6.3.1.20 0.00000000000000000000000000000000000000000000001669 180.0
CMS1_k127_3947946_8 Archaeal Type IV pilin, N-terminal - - - 0.000000000000000000000000000000000000001763 169.0
CMS1_k127_3947946_9 transcriptional regulators containing the CopG Arc MetJ DNA-binding domain - - - 0.0000000009741 60.0
CMS1_k127_3967217_0 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.000000000000000000000000000000000000000000000000000000000000001786 221.0
CMS1_k127_3967217_1 K -dependent Na Ca exchanger family protein K07301 - - 0.00000000000000000000000000001532 131.0
CMS1_k127_3967217_2 O-methyltransferase activity K00545 - 2.1.1.6 0.0000000000000000000000000007713 121.0
CMS1_k127_3967217_3 amine dehydrogenase activity K13714 - 3.2.1.96,3.5.1.28 0.0002762 51.0
CMS1_k127_3983148_0 TIGRFAM argininosuccinate lyase K01755 GO:0003674,GO:0003824,GO:0004056,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016829,GO:0016840,GO:0016842,GO:0019752,GO:0042450,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.3.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003095 382.0
CMS1_k127_3983148_1 Carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase K11540 GO:0000050,GO:0000052,GO:0000166,GO:0001882,GO:0001884,GO:0002119,GO:0002134,GO:0002164,GO:0003674,GO:0003824,GO:0004070,GO:0004087,GO:0004088,GO:0004151,GO:0004672,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005829,GO:0006082,GO:0006139,GO:0006206,GO:0006207,GO:0006213,GO:0006220,GO:0006221,GO:0006228,GO:0006464,GO:0006468,GO:0006520,GO:0006525,GO:0006526,GO:0006541,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0007275,GO:0008144,GO:0008150,GO:0008152,GO:0008270,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009112,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009163,GO:0009165,GO:0009199,GO:0009201,GO:0009208,GO:0009209,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009605,GO:0009653,GO:0009719,GO:0009725,GO:0009791,GO:0009887,GO:0009987,GO:0009991,GO:0010033,GO:0010243,GO:0016053,GO:0016301,GO:0016310,GO:0016363,GO:0016597,GO:0016740,GO:0016741,GO:0016743,GO:0016772,GO:0016773,GO:0016787,GO:0016810,GO:0016812,GO:0016874,GO:0016879,GO:0016884,GO:0017076,GO:0017144,GO:0018107,GO:0018130,GO:0018193,GO:0018210,GO:0019103,GO:0019240,GO:0019438,GO:0019538,GO:0019627,GO:0019637,GO:0019693,GO:0019752,GO:0019856,GO:0019899,GO:0022612,GO:0030424,GO:0030554,GO:0031406,GO:0031667,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032549,GO:0032551,GO:0032553,GO:0032555,GO:0032557,GO:0032559,GO:0032868,GO:0032991,GO:0033267,GO:0034399,GO:0034404,GO:0034641,GO:0034654,GO:0035295,GO:0035639,GO:0036094,GO:0036211,GO:0036477,GO:0042221,GO:0042455,GO:0042594,GO:0042802,GO:0042995,GO:0043005,GO:0043025,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043177,GO:0043195,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043434,GO:0043436,GO:0043603,GO:0043604,GO:0043679,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044283,GO:0044297,GO:0044306,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044456,GO:0044463,GO:0044464,GO:0045202,GO:0046051,GO:0046112,GO:0046131,GO:0046132,GO:0046134,GO:0046390,GO:0046394,GO:0046483,GO:0046777,GO:0046872,GO:0046914,GO:0048513,GO:0048565,GO:0048731,GO:0048732,GO:0048856,GO:0050896,GO:0055086,GO:0055123,GO:0060465,GO:0070013,GO:0070335,GO:0070406,GO:0071704,GO:0071941,GO:0072527,GO:0072528,GO:0090407,GO:0097159,GO:0097367,GO:0097458,GO:0098793,GO:0120025,GO:0120038,GO:0140096,GO:0150034,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1901652,GO:1901657,GO:1901659,GO:1901698,GO:1901700,GO:1905905 2.1.3.2,3.5.2.3,6.3.5.5 0.000000000000000000000000000000000000000000000000005427 186.0
CMS1_k127_3983148_2 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 - 6.3.4.5 0.000000000000000000000000004066 113.0
CMS1_k127_3983798_0 Part of the ACDS complex that catalyzes the reversible cleavage of acetyl-CoA, allowing growth on acetate as sole source of carbon and energy. The alpha-epsilon subcomponent functions as a carbon monoxide dehydrogenase K00192 - 1.2.7.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000371 508.0
CMS1_k127_3983798_1 PFAM Cobyrinic acid a,c-diamide synthase K07321 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006438 311.0
CMS1_k127_4010751_0 Oxidoreductase, molybdopterin binding - - - 0.000000000000000000000000000000000000000000000000000000000647 211.0
CMS1_k127_4010751_1 Belongs to the class VI-like SAM-binding methyltransferase superfamily. Isoprenylcysteine carboxyl methyltransferase family K00587 GO:0003674,GO:0003824,GO:0003880,GO:0004671,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005637,GO:0005737,GO:0005783,GO:0005789,GO:0006464,GO:0006479,GO:0006481,GO:0006807,GO:0007323,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0010340,GO:0010467,GO:0012505,GO:0016020,GO:0016021,GO:0016740,GO:0016741,GO:0018410,GO:0019538,GO:0019866,GO:0031090,GO:0031136,GO:0031137,GO:0031139,GO:0031224,GO:0031965,GO:0031967,GO:0031975,GO:0031984,GO:0032259,GO:0036211,GO:0042175,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043414,GO:0043687,GO:0043900,GO:0043902,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0046999,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051604,GO:0051998,GO:0065007,GO:0071432,GO:0071704,GO:0098827,GO:0140096,GO:1901564,GO:2000241,GO:2000243 2.1.1.100 0.00002636 55.0
CMS1_k127_4015936_0 protein tyrosine kinase activity K03593 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003094 325.0
CMS1_k127_4015936_1 Threonine dehydratase K01754 - 4.3.1.19 0.0000000000000000000000000000000000000000000003396 171.0
CMS1_k127_4015936_2 Binds double-stranded DNA tightly but without sequence specificity. It is distributed uniformly and abundantly on the chromosome, suggesting a role in chromatin architecture. However, it does not significantly compact DNA. Binds rRNA and mRNA in vivo. May play a role in maintaining the structural and functional stability of RNA, and, perhaps, ribosomes K03622 - - 0.0000000000000000000009207 98.0
CMS1_k127_4017993_0 PFAM Glycosyl transferase family 2 K00721 - 2.4.1.83 0.000000000000000000000000000000001529 138.0
CMS1_k127_4017993_1 Flavodoxin - - - 0.000000000000000000000000003617 116.0
CMS1_k127_4017993_2 Protein of unknown function (DUF996) - - - 0.0000000000000000000006967 102.0
CMS1_k127_4017993_3 PFAM Acetoacetate decarboxylase - - - 0.0000000000000000407 87.0
CMS1_k127_4029525_0 Amino acid kinase family K00928 - 2.7.2.4 0.000000000000000000000000000000000000000000000000000000000000000000002676 254.0
CMS1_k127_4029525_1 PFAM NADH flavin oxidoreductase NADH oxidase - - - 0.0000000000000000000000000000000000000000000000000005633 190.0
CMS1_k127_4029525_2 Toxic component of a toxin-antitoxin (TA) module. An RNase K07064 - - 0.000000001741 63.0
CMS1_k127_4029525_3 nucleic acid-binding protein, contains PIN domain - - - 0.00000126 54.0
CMS1_k127_4029525_4 DCD - - - 0.0005507 48.0
CMS1_k127_4039216_0 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K03231 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004651 581.0
CMS1_k127_4039216_1 Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP K00763 - 6.3.4.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000293 442.0
CMS1_k127_4039216_2 Belongs to the UPF0219 family K01641 - 2.3.3.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006675 291.0
CMS1_k127_4039216_3 Thiolase, N-terminal domain K00626 - 2.3.1.9 0.00000000000000000000000000000000000000000000000000000003024 212.0
CMS1_k127_4039216_4 PFAM Glycosyl transferase family 2 K00721 - 2.4.1.83 0.00000000000000000000000000000000000000000000009902 177.0
CMS1_k127_4039216_5 PFAM ribonuclease H K03469,K06864 - 3.1.26.4 0.0000000000000000000004058 106.0
CMS1_k127_4039216_6 Lactoylglutathione lyase K01759 GO:0003674,GO:0003824,GO:0004462,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006081,GO:0006082,GO:0006089,GO:0006518,GO:0006575,GO:0006749,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009438,GO:0009987,GO:0016151,GO:0016829,GO:0016846,GO:0019243,GO:0019752,GO:0032787,GO:0034641,GO:0042180,GO:0042182,GO:0043167,GO:0043169,GO:0043436,GO:0043603,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046185,GO:0046872,GO:0046914,GO:0051186,GO:0051596,GO:0061727,GO:0071704,GO:1901564,GO:1901575,GO:1901615 4.4.1.5 0.00000000000004081 82.0
CMS1_k127_4041205_0 SMART Elongator protein 3 MiaB NifB - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001955 364.0
CMS1_k127_4048603_0 malic enzyme K00027,K00029 - 1.1.1.38,1.1.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002866 533.0
CMS1_k127_4048603_1 PFAM ABC transporter related K09695 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006412 314.0
CMS1_k127_4048603_2 integral membrane protein K07027 - - 0.000000000000000000000105 110.0
CMS1_k127_4048603_3 TIGRFAM ribosomal-protein-alanine acetyltransferase K03789 - 2.3.1.128 0.0000000000000000009024 91.0
CMS1_k127_4048603_4 PFAM ABC-2 type transporter K09694 - - 0.000000000000253 72.0
CMS1_k127_4048603_5 Protein of unknown function (DUF3795) - - - 0.00001608 50.0
CMS1_k127_4093278_0 Parallel beta-helix repeats - - - 0.0000000000000000000000000000000005396 153.0
CMS1_k127_4093278_1 Transcriptional regulator - - - 0.000000000000000000000000006233 117.0
CMS1_k127_4093278_2 Peptidase C13 family - - - 0.000000000000000000236 104.0
CMS1_k127_4093278_3 - - - - 0.000007043 55.0
CMS1_k127_4093278_4 - - - - 0.0005346 44.0
CMS1_k127_4127817_0 PFAM pyruvate flavodoxin ferredoxin oxidoreductase domain protein K00169 - 1.2.7.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004429 441.0
CMS1_k127_4127817_1 TIGRFAM pyruvate ketoisovalerate oxidoreductase, gamma subunit K00172 - 1.2.7.1 0.000000000000000000000000000000000000000000000000000002496 198.0
CMS1_k127_4127817_2 TIGRFAM pyruvate ferredoxin flavodoxin oxidoreductase, delta subunit K00171 - 1.2.7.1 0.0000000000000000000000000011 115.0
CMS1_k127_4135485_0 Protein of unknown function (DUF1015) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006954 372.0
CMS1_k127_4135485_1 D-isomer specific 2-hydroxyacid dehydrogenase catalytic K00058 - 1.1.1.399,1.1.1.95 0.00000000000000000000000000000000000000181 150.0
CMS1_k127_4135485_2 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 0.00000002097 57.0
CMS1_k127_4165755_0 PFAM Nucleotidyl transferase K00973 - 2.7.7.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001358 401.0
CMS1_k127_4165755_1 TIGRFAM dTDP-4-dehydrorhamnose reductase K00067 - 1.1.1.133 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003459 329.0
CMS1_k127_4165755_2 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 - 5.1.3.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000429 261.0
CMS1_k127_4165755_3 COG2041 Sulfite oxidase and related enzymes - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003242 261.0
CMS1_k127_4165755_4 PFAM sodium calcium exchanger K07301 - - 0.00000000000000000000000000000007076 137.0
CMS1_k127_4165755_5 Domain of unknown function (DUF1508) - - - 0.0000000000004063 70.0
CMS1_k127_419380_0 Virulence factor BrkB K07058 - - 0.00000000000000000000000000000000000000001187 166.0
CMS1_k127_419380_1 - - - - 0.00000000001924 70.0
CMS1_k127_419380_2 COG0455 ATPases involved in chromosome partitioning K03496,K03609 - - 0.00000065 51.0
CMS1_k127_4285188_0 PFAM tRNA synthetase, class II (D, K and N) K01893 - 6.1.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003228 457.0
CMS1_k127_4285188_1 TIGRFAM ATPase, P-type (transporting), HAD superfamily, subfamily IC K01535,K01537 - 3.6.3.6,3.6.3.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002694 343.0
CMS1_k127_4285188_2 Oxidoreductase FAD-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000795 240.0
CMS1_k127_4401785_0 Part of a complex that catalyzes the reversible cleavage of acetyl-CoA, allowing K00197 - 2.1.1.245 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000857 274.0
CMS1_k127_4401785_1 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 0.0000000000000000000000000000000000000000000005532 177.0
CMS1_k127_4466733_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.9 1.704e-215 691.0
CMS1_k127_4466733_1 Specifically catalyzes the NAD or NADP-dependent dehydrogenation of L-aspartate to iminoaspartate K06989 - 1.4.1.21 0.000000000000000000000000000000000000004552 154.0
CMS1_k127_4467320_0 PFAM Oxidoreductase K18855 - 1.1.1.374 0.00000000000000000000000000000000000000000000000000000000000000000000000004615 259.0
CMS1_k127_4467320_1 Met-10+ like-protein K15429 - 2.1.1.228 0.000000000000000000000000000000000000000000000000000000000000000000852 237.0
CMS1_k127_4467320_2 PFAM Trm112p-like protein - - - 0.000000000000000000000000158 108.0
CMS1_k127_4467320_3 - - - - 0.000000002387 62.0
CMS1_k127_4467320_4 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03059 - 2.7.7.6 0.0000001772 54.0
CMS1_k127_4472991_0 protein transport K10956 GO:0000322,GO:0000323,GO:0000324,GO:0001655,GO:0001700,GO:0001822,GO:0002009,GO:0002376,GO:0003674,GO:0005048,GO:0005215,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005783,GO:0005784,GO:0005789,GO:0005791,GO:0005829,GO:0005886,GO:0006508,GO:0006511,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006616,GO:0006620,GO:0006807,GO:0006810,GO:0006886,GO:0006950,GO:0006952,GO:0006955,GO:0006996,GO:0007029,GO:0007275,GO:0007391,GO:0007399,GO:0007417,GO:0007420,GO:0008104,GO:0008150,GO:0008152,GO:0008258,GO:0008320,GO:0008565,GO:0009056,GO:0009057,GO:0009605,GO:0009607,GO:0009615,GO:0009653,GO:0009790,GO:0009792,GO:0009888,GO:0009892,GO:0009894,GO:0009895,GO:0009987,GO:0010033,GO:0010243,GO:0010256,GO:0010498,GO:0010506,GO:0010507,GO:0010941,GO:0010942,GO:0010959,GO:0012505,GO:0012506,GO:0015031,GO:0015399,GO:0015405,GO:0015450,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0016331,GO:0017038,GO:0019222,GO:0019538,GO:0019941,GO:0021536,GO:0021538,GO:0021986,GO:0022804,GO:0022857,GO:0022884,GO:0030139,GO:0030163,GO:0030176,GO:0030433,GO:0030659,GO:0030666,GO:0030670,GO:0030867,GO:0030900,GO:0030970,GO:0031090,GO:0031204,GO:0031224,GO:0031227,GO:0031323,GO:0031324,GO:0031329,GO:0031330,GO:0031410,GO:0031982,GO:0031984,GO:0032501,GO:0032502,GO:0032527,GO:0032879,GO:0032991,GO:0033036,GO:0033218,GO:0033365,GO:0033554,GO:0034097,GO:0034341,GO:0034613,GO:0034756,GO:0034758,GO:0034759,GO:0034761,GO:0034762,GO:0034764,GO:0034765,GO:0034767,GO:0034976,GO:0036503,GO:0039019,GO:0042175,GO:0042221,GO:0042277,GO:0042335,GO:0042886,GO:0042887,GO:0043021,GO:0043022,GO:0043161,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043269,GO:0043270,GO:0043632,GO:0043900,GO:0043902,GO:0043903,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044433,GO:0044444,GO:0044446,GO:0044464,GO:0044743,GO:0044877,GO:0045047,GO:0045087,GO:0045169,GO:0045184,GO:0045335,GO:0046596,GO:0046598,GO:0046907,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048524,GO:0048598,GO:0048729,GO:0048731,GO:0048793,GO:0048856,GO:0050789,GO:0050792,GO:0050794,GO:0050896,GO:0051049,GO:0051050,GO:0051179,GO:0051234,GO:0051603,GO:0051641,GO:0051649,GO:0051704,GO:0051707,GO:0051716,GO:0055085,GO:0060322,GO:0060429,GO:0065002,GO:0065007,GO:0070727,GO:0070843,GO:0070972,GO:0071256,GO:0071261,GO:0071702,GO:0071704,GO:0071705,GO:0071806,GO:0071840,GO:0071944,GO:0072001,GO:0072006,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:0097708,GO:0098586,GO:0098588,GO:0098796,GO:0098805,GO:0098827,GO:1901564,GO:1901565,GO:1901575,GO:1901698,GO:1903513,GO:1903900,GO:1903902,GO:1904062,GO:1904064,GO:1904680 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005774 398.0
CMS1_k127_4472991_1 Belongs to the cytidylate kinase family. Type 2 subfamily K00945 - 2.7.4.25 0.0000000000000000000000000000000000000000000009207 171.0
CMS1_k127_4472991_2 Flavodoxin domain K00230 - 1.3.5.3 0.000000000000000000000000000000006697 134.0
CMS1_k127_4472991_3 Binds to the 23S rRNA K02876 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000224 110.0
CMS1_k127_4472991_4 Hsp20/alpha crystallin family K13993 - - 0.00000001513 61.0
CMS1_k127_4538196_0 pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for K15987 - 3.6.1.1 1.418e-248 787.0
CMS1_k127_4538196_1 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate K00147 - 1.2.1.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004502 499.0
CMS1_k127_4538196_10 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein K14091 - - 0.0000000000005784 74.0
CMS1_k127_4538196_11 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.0000000003911 72.0
CMS1_k127_4538196_12 NADH ubiquinone oxidoreductase subunit 11 or 4L (chain K) K00340 - 1.6.5.3 0.000009817 54.0
CMS1_k127_4538196_2 NADH-Ubiquinone oxidoreductase (complex I), chain 5 K00341,K14086 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009718 332.0
CMS1_k127_4538196_3 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate K00931 - 2.7.2.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001911 287.0
CMS1_k127_4538196_4 General factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Binds specifically to the TATA box promoter element which lies close to the position of transcription initiation K03120 - - 0.0000000000000000000000000000000000000000000000000000000000000004402 224.0
CMS1_k127_4538196_5 TIGRFAM proton-translocating NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000008479 236.0
CMS1_k127_4538196_6 DNA polymerase beta domain protein region K07073 - - 0.0000000000000000000000000000000000000000000000000000000001032 212.0
CMS1_k127_4538196_7 May function in recognizing stalled ribosomes, interact with stem-loop structures in stalled mRNA molecules, and effect endonucleolytic cleavage of the mRNA. May play a role in the release non-functional ribosomes and degradation of damaged mRNAs. Has endoribonuclease activity K06965 GO:0000956,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006401,GO:0006402,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010605,GO:0010629,GO:0016043,GO:0016070,GO:0016071,GO:0016072,GO:0016075,GO:0019222,GO:0019439,GO:0019538,GO:0022411,GO:0032790,GO:0032984,GO:0032988,GO:0034641,GO:0034645,GO:0034655,GO:0034660,GO:0034661,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044271,GO:0044424,GO:0044464,GO:0044877,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0060255,GO:0065007,GO:0070651,GO:0070966,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:1901360,GO:1901361,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1903008 - 0.0000000000000000000000000000000000000000000000000000000001383 217.0
CMS1_k127_4538196_8 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000002197 211.0
CMS1_k127_4538196_9 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 GO:0003674,GO:0003824,GO:0003954,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564 1.6.5.3 0.000000000000000000000000000000000000000000000001509 192.0
CMS1_k127_4567779_0 Belongs to the carbohydrate kinase PfkB family K00852 - 2.7.1.15 0.0000000000000000000000000000000000000002148 164.0
CMS1_k127_4567779_1 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 0.000000000000000000000000000000000008089 142.0
CMS1_k127_4567779_2 PFAM PKD domain containing protein K11751 - 3.1.3.5,3.6.1.45 0.000000000000000000000000000000006715 138.0
CMS1_k127_4567779_3 Peptidase A24A, prepilin type IV K07991 - 3.4.23.52 0.00000000000000000005153 100.0
CMS1_k127_4607616_0 in RNase L inhibitor, RLI K06174 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001896 550.0
CMS1_k127_4607616_1 Relaxes both positive and negative superturns and exhibits a strong decatenase activity K03167 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022613,GO:0032991,GO:0034641,GO:0034645,GO:0042254,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 5.99.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003612 477.0
CMS1_k127_4617240_0 Sodium Bile acid symporter family K03325 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006820,GO:0008150,GO:0008509,GO:0015075,GO:0015103,GO:0015104,GO:0015105,GO:0015291,GO:0015297,GO:0015318,GO:0015698,GO:0015699,GO:0015700,GO:0016020,GO:0022804,GO:0022857,GO:0034220,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0098656 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001341 295.0
CMS1_k127_4617240_1 PAS fold - - - 0.0000000000000000000000000000000000000000000001608 182.0
CMS1_k127_4617240_2 Protein of unknown function (DUF3795) - - - 0.0000000000000000000000000000000001145 136.0
CMS1_k127_4619704_0 SMART Elongator protein 3 MiaB NifB K22227 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003448 338.0
CMS1_k127_4619704_1 MgtE integral membrane K07244 - - 0.000000000000000000000000000000000000000000000000002052 197.0
CMS1_k127_4664424_0 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001303 541.0
CMS1_k127_4664424_1 Nucleotidyl transferase K00966 - 2.7.7.13 0.000000000000000000000000000000000000000000000000000000001518 210.0
CMS1_k127_4664424_2 helix_turn_helix ASNC type - - - 0.0000000000000000000000000000000000000000000000000002808 188.0
CMS1_k127_4664424_3 serine O-acetyltransferase K00640 - 2.3.1.30 0.0003341 44.0
CMS1_k127_4672501_0 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004224 469.0
CMS1_k127_4672501_1 Formylmethanofuran-tetrahydromethanopterin formyltransferase K00672 - 2.3.1.101 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002696 391.0
CMS1_k127_4672501_2 Belongs to the carbohydrate kinase PfkB family K00852 - 2.7.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001422 316.0
CMS1_k127_4672501_3 Protein of unknown function (DUF2961) K14109 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009191 292.0
CMS1_k127_4672501_4 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 6.3.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000005897 257.0
CMS1_k127_4687871_0 TIGRFAM PAS sensor protein - - - 0.0000000000000000000000000000000000000000000000000000000000000006591 241.0
CMS1_k127_4687871_1 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.000000000000000000000000000000000000000000000000000000004446 212.0
CMS1_k127_4687871_2 PAS domain containing protein - - - 0.000000000000000000000000000000000000000000000000003249 203.0
CMS1_k127_4687871_3 Specifically catalyzes the N1-methylation of pseudouridine at position 54 (Psi54) in tRNAs K16317 - 2.1.1.257 0.000000000000000000000006889 108.0
CMS1_k127_4687871_4 Molybdopterin converting factor, small subunit K03636 - - 0.000006764 51.0
CMS1_k127_4687871_5 Transcription factor K09191 GO:0000182,GO:0000995,GO:0001016,GO:0001030,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0005488,GO:0006139,GO:0006351,GO:0006352,GO:0006355,GO:0006359,GO:0006383,GO:0006384,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0031323,GO:0031326,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0043565,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0071704,GO:0080084,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:0140110,GO:0140223,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1903506,GO:1990837,GO:2000112,GO:2001141 - 0.0004156 47.0
CMS1_k127_4687871_6 PFAM Xylose isomerase domain protein TIM barrel - - - 0.0006704 50.0
CMS1_k127_469578_0 Cell division protein 48 (CDC48), domain 2 K13525 - - 1.143e-283 889.0
CMS1_k127_469578_1 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro) K01881 - 6.1.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009485 333.0
CMS1_k127_469578_2 Structure-specific nuclease with 5'-flap endonuclease and 5'-3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. Binds the unpaired 3'-DNA end and kinks the DNA to facilitate 5' cleavage specificity. Cleaves one nucleotide into the double- stranded DNA from the junction in flap DNA, leaving a nick for ligation. Also involved in the base excision repair (BER) pathway. Acts as a genome stabilization factor that prevents flaps from equilibrating into K04799 - - 0.0000000000000000000000000000000001379 134.0
CMS1_k127_469578_3 Domain of unknown function (DUF1610) K07580 - - 0.0000000000000004051 81.0
CMS1_k127_469578_4 Promotes the exchange of GDP for GTP in EF-1-alpha GDP, thus allowing the regeneration of EF-1-alpha GTP that could then be used to form the ternary complex EF-1-alpha GTP AAtRNA K03232 - - 0.00000000000005958 74.0
CMS1_k127_4720177_0 SMART Elongator protein 3 MiaB NifB K04034 - 1.21.98.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007674 566.0
CMS1_k127_4720177_1 ubiE/COQ5 methyltransferase family K00574,K07755 - 2.1.1.137,2.1.1.79 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006646 294.0
CMS1_k127_4720177_2 PQQ enzyme repeat K05889,K12132 - 1.1.2.6,2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000004613 276.0
CMS1_k127_4720177_3 deoxyhypusine monooxygenase activity - - - 0.00000000000000000000000000006993 118.0
CMS1_k127_4720177_5 toxin-antitoxin pair type II binding - - - 0.0000000000000000009006 88.0
CMS1_k127_4727635_0 ATPases associated with a variety of cellular activities K02013 - 3.6.3.34 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001699 385.0
CMS1_k127_4727635_1 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001504 295.0
CMS1_k127_4727635_2 PFAM periplasmic binding protein K02016 - - 0.00000000000000000000000000000001768 133.0
CMS1_k127_4778215_0 Histidine kinase - - - 0.00000000000000000000000000000000000000000001028 180.0
CMS1_k127_4819696_0 Superfamily I DNA and RNA - - - 1.59e-259 859.0
CMS1_k127_4819696_1 TIGRFAM daunorubicin resistance ABC transporter K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004267 388.0
CMS1_k127_4819696_2 PFAM ABC-2 type transporter K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002753 256.0
CMS1_k127_4819696_3 Protein of unknown function (DUF1638) - - - 0.00000005773 62.0
CMS1_k127_4839950_0 Belongs to the glycosyl hydrolase 1 family K01190 GO:0003674,GO:0003824,GO:0004553,GO:0008150,GO:0008152,GO:0008422,GO:0015926,GO:0016787,GO:0016798,GO:0071704,GO:1901135,GO:1901657 3.2.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005633 550.0
CMS1_k127_4839950_1 FAD dependent oxidoreductase K00111 - 1.1.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001505 473.0
CMS1_k127_4839950_2 Oxidoreductase - - - 0.000000000000000000000000000001105 122.0
CMS1_k127_4853506_0 Probable molybdopterin binding domain - - - 0.000000003995 61.0
CMS1_k127_486378_0 UbiA prenyltransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001508 278.0
CMS1_k127_486378_1 PFAM UbiA prenyltransferase K02548 - 2.5.1.74 0.0000000000000000000000000000000000007189 151.0
CMS1_k127_4883139_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000002939 226.0
CMS1_k127_4883139_1 ubiE/COQ5 methyltransferase family - - - 0.0000000000000000000000000000000000000000000000006689 185.0
CMS1_k127_4883139_2 Protein involved in cellulose biosynthesis - - - 0.0000000003732 64.0
CMS1_k127_4961164_0 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K00382 - 1.8.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001102 509.0
CMS1_k127_4961164_1 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001537 268.0
CMS1_k127_4961164_2 AAA domain K07321 - - 0.0000000000000000000000000000000000000000000000000000000000000000003573 237.0
CMS1_k127_4961164_3 methyltransferase - - - 0.000000000000000001048 89.0
CMS1_k127_4961164_4 COG0589 Universal stress protein UspA and related nucleotide-binding proteins K03294 - - 0.00000000000000006177 87.0
CMS1_k127_4961164_5 4-oxalocrotonate tautomerase K01821 - 5.3.2.6 0.000000000000002288 78.0
CMS1_k127_4961164_6 Ribosomal RNA adenine dimethylase - - - 0.000000000009522 69.0
CMS1_k127_4988446_0 Radical SAM domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001594 261.0
CMS1_k127_4988446_1 4Fe-4S single cluster domain - - - 0.00000000000000000000000000000000000000000000000001057 186.0
CMS1_k127_4988446_2 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis K04479 - 2.7.7.7 0.000001166 50.0
CMS1_k127_5008936_0 Glycogen debranching enzyme N terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002011 535.0
CMS1_k127_5008936_1 Porphyromonas-type peptidyl-arginine deiminase K10536 - 3.5.3.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004387 415.0
CMS1_k127_5008936_10 transcriptional - - - 0.00000000000000003122 96.0
CMS1_k127_5008936_11 PFAM CBS domain containing protein - - - 0.0000000004559 72.0
CMS1_k127_5008936_12 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.0001133 50.0
CMS1_k127_5008936_2 PFAM Pre-mRNA processing ribonucleoprotein, binding K14564 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003398 345.0
CMS1_k127_5008936_3 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K12251 - 3.5.1.53 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005683 310.0
CMS1_k127_5008936_4 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 GO:0003674,GO:0003824,GO:0004807,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006066,GO:0006071,GO:0006081,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0018130,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019400,GO:0019405,GO:0019438,GO:0019439,GO:0019563,GO:0019637,GO:0019682,GO:0019693,GO:0019751,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044262,GO:0044270,GO:0044271,GO:0044275,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046164,GO:0046166,GO:0046174,GO:0046184,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901615,GO:1901616 5.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007401 289.0
CMS1_k127_5008936_5 Involved in pre-rRNA and tRNA processing. Utilizes the methyl donor S-adenosyl-L-methionine to catalyze the site-specific 2'-hydroxyl methylation of ribose moieties in rRNA and tRNA. Site specificity is provided by a guide RNA that base pairs with the substrate. Methylation occurs at a characteristic distance from the sequence involved in base pairing with the guide RNA K04795 GO:0000154,GO:0000494,GO:0001510,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0006139,GO:0006325,GO:0006364,GO:0006396,GO:0006464,GO:0006479,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008213,GO:0008276,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016072,GO:0016074,GO:0016569,GO:0016570,GO:0016571,GO:0016740,GO:0016741,GO:0018364,GO:0019538,GO:0022613,GO:0031123,GO:0031126,GO:0031167,GO:0032259,GO:0033967,GO:0034470,GO:0034641,GO:0034660,GO:0034963,GO:0036009,GO:0036211,GO:0042054,GO:0042254,GO:0043144,GO:0043170,GO:0043412,GO:0043414,GO:0043628,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0046483,GO:0051276,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0140096,GO:0140098,GO:0140102,GO:1901360,GO:1901363,GO:1901564,GO:1990258,GO:1990259 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000008548 269.0
CMS1_k127_5008936_6 galactose-1-phosphate uridylyltransferase K00965 - 2.7.7.12 0.000000000000000000000000000000000000000000000000000000000000000000000000001315 267.0
CMS1_k127_5008936_7 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006281,GO:0006298,GO:0006401,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0032299,GO:0032991,GO:0033554,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576 3.1.26.4 0.00000000000000000000000000000000000000000000000000000004367 203.0
CMS1_k127_5008936_8 Protein of unknown function DUF89 K09116 - - 0.0000000000000000000000000000000000000000000000009082 186.0
CMS1_k127_5008936_9 Anaerobic ribonucleoside-triphosphate reductase K21636 - 1.1.98.6 0.0000000000000000000000000000000000000002755 155.0
CMS1_k127_5023440_0 PFAM ABC transporter related K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003251 426.0
CMS1_k127_5023440_1 ABC-type multidrug transport system, ATPase component K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002548 339.0
CMS1_k127_5023440_2 Membrane protein of 12 TMs K01992,K07087 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001369 289.0
CMS1_k127_5023440_3 TIGRFAM daunorubicin resistance ABC transporter, inner membrane subunit B K01992 - - 0.00000000000000000000000000000000000000000005208 162.0
CMS1_k127_5023440_4 OsmC-like protein - - - 0.000000002987 63.0
CMS1_k127_5052184_0 ATP-dependent agmatine transferase that catalyzes the formation of 2-agmatinylcytidine (agm2C) at the wobble position (C34) of tRNA(Ile2), converting the codon specificity from AUG to AUA K06932 - 6.3.4.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001959 352.0
CMS1_k127_5052184_1 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872,K07050 GO:0000049,GO:0002161,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006450,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016787,GO:0016788,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0042802,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0097159,GO:0106074,GO:0140098,GO:0140101,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.1.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002521 283.0
CMS1_k127_5052184_2 Lrp/AsnC ligand binding domain - - - 0.000000000000000000000002002 104.0
CMS1_k127_5124478_0 COG1215 Glycosyltransferases, probably involved in cell wall biogenesis K19003 - 2.4.1.336 0.000000000000000000000000000000000000003136 164.0
CMS1_k127_5124478_1 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000001112 84.0
CMS1_k127_5124478_2 - - - - 0.0000000000003138 77.0
CMS1_k127_5124478_3 Belongs to the peptidase S8 family K12287 - - 0.00008955 49.0
CMS1_k127_5133371_0 Catalyzes the conversion of AMP and phosphate to adenine and ribose 1,5-bisphosphate (R15P). Exhibits phosphorylase activity toward CMP and UMP in addition to AMP. Functions in an archaeal AMP degradation pathway, together with R15P isomerase and RubisCO K18931 - 2.4.2.57 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001584 477.0
CMS1_k127_5133371_1 Mitochondrial biogenesis AIM24 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002481 320.0
CMS1_k127_5133371_2 Ribulose bisphosphate carboxylase large chain, catalytic domain K01601,K08965 - 4.1.1.39,5.3.2.5 0.0000000000000000000000000000000000000000000002587 171.0
CMS1_k127_515466_0 Belongs to the alpha-IPM synthase homocitrate synthase family K01649 - 2.3.3.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001698 546.0
CMS1_k127_515466_1 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000149 513.0
CMS1_k127_515466_2 Isocitrate isopropylmalate dehydrogenase K00052 - 1.1.1.85 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001541 398.0
CMS1_k127_515466_3 Thiamine pyrophosphate enzyme, central domain K01652 - 2.2.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000004893 255.0
CMS1_k127_515466_4 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 GO:0003674,GO:0003824,GO:0003861,GO:0016829,GO:0016835,GO:0016836 4.2.1.33,4.2.1.35 0.0000000000000000000000000000000000000000000000000000001175 201.0
CMS1_k127_515466_5 acetolactate synthase, small K01653 - 2.2.1.6 0.000000000000000000000000000000000000000000000000005427 185.0
CMS1_k127_515466_6 amino acid-binding ACT domain protein K04518 - 4.2.1.51 0.00000000000000000000000000000000008749 136.0
CMS1_k127_5188000_0 COG0517 FOG CBS domain - - - 0.000000000000000003052 91.0
CMS1_k127_5188000_1 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0002298 53.0
CMS1_k127_520697_0 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000000000000000000000000000000000285 177.0
CMS1_k127_520697_1 PFAM nucleic acid binding, OB-fold, tRNA helicase-type K07466 - - 0.0000000000000182 83.0
CMS1_k127_520697_2 - - - - 0.000000000001 74.0
CMS1_k127_520697_3 Isocitrate/isopropylmalate dehydrogenase K00031 - 1.1.1.42 0.00000000001548 65.0
CMS1_k127_520697_5 Protein of unknown function DUF131 - - - 0.0004732 49.0
CMS1_k127_5250004_0 ATPase, P-type, K Mg Cd Cu Zn Na Ca Na H-transporter K01535,K12952 - 3.6.3.6 0.0 1028.0
CMS1_k127_5250004_1 response to UV K13281 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001932 314.0
CMS1_k127_5250004_2 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. - - - 0.00000000000000000000000000000000000000000000000000000000000000000006024 242.0
CMS1_k127_5250004_3 COGs COG2335 Secreted and surface protein containing fasciclin-like repeats - - - 0.00000000000000000000000000000000000000000000000000000000000008375 214.0
CMS1_k127_5250004_4 Nitroreductase family - - - 0.00000000000000000000000000000000000000000001122 168.0
CMS1_k127_5250004_5 methyltransferase activity - - - 0.000000000000000000000000000001874 127.0
CMS1_k127_5250004_6 GYD domain - - - 0.0000000000000000001218 92.0
CMS1_k127_5250004_7 Domain of unknown function (DUF4342) - - - 0.0000000000000001724 83.0
CMS1_k127_5250004_8 Haloacid dehalogenase K17686 - 3.6.3.54 0.00003569 48.0
CMS1_k127_5250004_9 Domain of unknown function (DUF4870) - - - 0.00005007 50.0
CMS1_k127_5388725_0 Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP) K01823 - 5.3.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004334 375.0
CMS1_k127_5388725_1 Belongs to the FPP GGPP synthase family K13787 - 2.5.1.1,2.5.1.10,2.5.1.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000008439 293.0
CMS1_k127_5388725_2 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.000000000000000000000000000000000000000000000000000000000000007029 222.0
CMS1_k127_5388725_3 Catalyzes the formation of isopentenyl diphosphate (IPP), the building block of all isoprenoids K06981 - 2.7.4.26 0.000000000000000000000000000000000000000000001067 174.0
CMS1_k127_5409609_0 PFAM aspartate ornithine carbamoyltransferase carbamoyl-P binding domain K00609 GO:0003674,GO:0003824,GO:0004070,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016741,GO:0016743,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001925 367.0
CMS1_k127_5409609_1 Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate K07558 - 2.7.7.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005187 304.0
CMS1_k127_5409609_2 PFAM Sugar isomerase (SIS) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004914 286.0
CMS1_k127_5409609_3 TIGRFAM anaerobic ribonucleoside-triphosphate reductase K21636 - 1.1.98.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000001563 284.0
CMS1_k127_5409609_4 Belongs to the UPF0200 family - - - 0.0000000000000000000000000000000000000000002835 164.0
CMS1_k127_5409609_5 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.0000000000000000000000000000000000000000008581 163.0
CMS1_k127_5411190_0 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005477 411.0
CMS1_k127_5411190_1 NifU-like N terminal domain K04488 - - 0.0000000000000000000000000000000000000000000000000000000000002786 213.0
CMS1_k127_5411190_2 COG NOG04001 non supervised orthologous group K15923 - 3.2.1.51 0.00000000000000000000000000000000002374 143.0
CMS1_k127_5411190_3 Acyltransferase family - - - 0.00000000000000000000000000000005736 139.0
CMS1_k127_5411190_4 Sulfurtransferase TusA - - - 0.000000000000000003056 86.0
CMS1_k127_5417267_0 AAA domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004439 300.0
CMS1_k127_54256_0 TIGRFAM NiFe hydrogenase maturation protein HypF K04656 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004176 430.0
CMS1_k127_54256_1 hydrogenase expression formation protein K04654 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000196 376.0
CMS1_k127_54256_10 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 - - 0.0000000000000000000000000000000006061 133.0
CMS1_k127_54256_11 PFAM hydrogenase expression formation protein (HUPF HYPC) K04653 - - 0.0000000000000000000001867 98.0
CMS1_k127_54256_12 Binds 16S rRNA, required for the assembly of 30S particles K02954 GO:0003674,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0008270,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043167,GO:0043169,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046872,GO:0046914,GO:1990904 - 0.0000000000000000001281 89.0
CMS1_k127_54256_13 Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends K03538 GO:0000966,GO:0001682,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004526,GO:0004540,GO:0004549,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0030677,GO:0032991,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0099116,GO:0140098,GO:0140101,GO:1901360,GO:1902494,GO:1902555,GO:1905348,GO:1990904 3.1.26.5 0.00000000000000002959 84.0
CMS1_k127_54256_14 Belongs to the universal ribosomal protein uL29 family K02904 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000001332 65.0
CMS1_k127_54256_15 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000005097 53.0
CMS1_k127_54256_2 TIGRFAM hydrogenase expression formation protein HypE K04655 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000246 361.0
CMS1_k127_54256_3 Belongs to the eukaryotic ribosomal protein eS4 family K02987 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000009818 232.0
CMS1_k127_54256_4 Binds the lower part of the 30S subunit head K02982 - - 0.00000000000000000000000000000000000000000000000000000000000003454 222.0
CMS1_k127_54256_5 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000567 215.0
CMS1_k127_54256_6 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0097159,GO:1901363,GO:1990904 - 0.0000000000000000000000000000000000000000000000006257 178.0
CMS1_k127_54256_7 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000000000000000000219 175.0
CMS1_k127_54256_8 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 - - 0.00000000000000000000000000000000000000004555 156.0
CMS1_k127_54256_9 Located at the polypeptide exit tunnel on the outside of the subunit K02895 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022613,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0042254,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000001782 142.0
CMS1_k127_5432870_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 - 6.1.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006225 369.0
CMS1_k127_5432870_1 Alkyl hydroperoxide reductase K03564 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000007689 205.0
CMS1_k127_5432870_2 Alpha/beta hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000005839 204.0
CMS1_k127_5432870_3 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) - - - 0.0000000000000000000000000000000000000000000001876 173.0
CMS1_k127_5447238_0 TIGRFAM LPPG domain protein containing protein K11212 - 2.7.8.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001033 345.0
CMS1_k127_5447238_1 Belongs to the eukaryotic ribosomal protein eS1 family K02984 GO:0002181,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000002176 204.0
CMS1_k127_5447238_2 MoaE protein K03635 - 2.8.1.12 0.000000000000000000000000001205 118.0
CMS1_k127_5447238_3 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.000000007071 57.0
CMS1_k127_5519979_0 4Fe-4S binding domain protein - - - 0.000000000000000000000000000000000182 151.0
CMS1_k127_5519979_1 Bacterio-opsin activator HTH K06930 - - 0.00000000000000000000004194 107.0
CMS1_k127_5519979_2 Papain family cysteine protease - - - 0.0000000005008 70.0
CMS1_k127_5521331_0 Heavy metal transport detoxification protein K17686 - 3.6.3.54 1.325e-257 817.0
CMS1_k127_5521331_1 Flavodoxin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021 407.0
CMS1_k127_5521331_10 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.0000000000000256 74.0
CMS1_k127_5521331_2 ATP phosphoribosyltransferase K00765 - 2.4.2.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007716 402.0
CMS1_k127_5521331_3 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 - 1.1.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001623 359.0
CMS1_k127_5521331_4 PFAM Aminotransferase class I and II K00817 - 2.6.1.9 0.00000000000000000000000000000000000000000000000000000000000002717 228.0
CMS1_k127_5521331_5 Thioredoxin domain - - - 0.0000000000000000000000000000000000000000000000000000001964 201.0
CMS1_k127_5521331_6 imidazoleglycerol-phosphate dehydratase K01693 - 4.2.1.19 0.0000000000000000000000000000000000000000000000000000002635 199.0
CMS1_k127_5521331_7 PAC2 family K07159 - - 0.0000000000000000000000000000002938 133.0
CMS1_k127_5521331_8 PPIC-type PPIASE domain K07533 - 5.2.1.8 0.00000000000000000000000006052 109.0
CMS1_k127_5521331_9 PFAM YHS domain - - - 0.000000000000006748 76.0
CMS1_k127_5532797_0 PFAM Chaperonin Cpn60 TCP-1 K22447 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004356 587.0
CMS1_k127_5532797_1 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine K07566 - 2.7.7.87 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001655 385.0
CMS1_k127_5532797_2 Acetyltransferase (GNAT) family - - - 0.0000000000000000000000000000000000000000000000009688 179.0
CMS1_k127_5535134_0 membrane - - - 0.0000000000000000001846 91.0
CMS1_k127_5535134_1 COG1520 FOG WD40-like repeat - - - 0.000000004459 70.0
CMS1_k127_5535134_2 Lrp/AsnC ligand binding domain - - - 0.00006465 48.0
CMS1_k127_5535134_3 Sugar-specific transcriptional regulator TrmB - - - 0.0001528 53.0
CMS1_k127_5535604_0 TIGRFAM anaerobic ribonucleoside-triphosphate reductase K21636 - 1.1.98.6 1.998e-310 965.0
CMS1_k127_5535604_1 4Fe-4S single cluster domain K04069 - 1.97.1.4 0.00000000000000000000000000000000000000000000000002999 186.0
CMS1_k127_5535604_2 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.000000000000000000000000000000000000006865 149.0
CMS1_k127_5535604_3 Cupin domain - - - 0.0000000000000000000000000006682 116.0
CMS1_k127_5535604_4 Pyruvate ferredoxin oxidoreductase beta subunit C terminal K00175 - 1.2.7.11,1.2.7.3 0.000000000000000000001168 97.0
CMS1_k127_5535604_5 HTH DNA binding domain K06930 - - 0.0000003625 52.0
CMS1_k127_5570852_0 PFAM Cys Met metabolism K01740 - 2.5.1.49 6.016e-207 654.0
CMS1_k127_5570852_1 Function in general translation initiation by promoting the binding of the formylmethionine-tRNA to ribosomes. Seems to function along with eIF-2 K03243 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001413 620.0
CMS1_k127_5570852_2 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001352 355.0
CMS1_k127_5570852_3 GHMP kinases C terminal K00869 - 2.7.1.36 0.0000000000000000000000000000000000000000000000000000000000000004922 230.0
CMS1_k127_5571649_0 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007909 488.0
CMS1_k127_5571649_1 Domain of unknown function (DUF4438) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005994 339.0
CMS1_k127_5571649_2 Sodium hydrogen exchanger - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005971 317.0
CMS1_k127_5571649_3 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17884 - 2.7.8.39 0.00000000000000000000000000002693 125.0
CMS1_k127_5571649_4 ribosomal protein K02976 - - 0.00000000000000000000000000003833 118.0
CMS1_k127_5571649_5 Binds double-stranded DNA tightly but without sequence specificity. It is distributed uniformly and abundantly on the chromosome, suggesting a role in chromatin architecture. However, it does not significantly compact DNA. Binds rRNA and mRNA in vivo. May play a role in maintaining the structural and functional stability of RNA, and, perhaps, ribosomes K03622 - - 0.00000000000000000002426 93.0
CMS1_k127_5581591_0 Fibronectin-binding protein A N-terminus (FbpA) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008944 448.0
CMS1_k127_5581591_1 GyrI-like small molecule binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000007622 248.0
CMS1_k127_5581591_2 TIGRFAM phage SPO1 DNA polymerase-related protein K21929 GO:0003674,GO:0003824,GO:0004844,GO:0005488,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0048037,GO:0050896,GO:0051536,GO:0051539,GO:0051540,GO:0051716,GO:0071704,GO:0090304,GO:0097506,GO:0140097,GO:1901360 3.2.2.27 0.00000000000000000000000000000000000001602 149.0
CMS1_k127_5581591_3 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) - - - 0.00002315 47.0
CMS1_k127_5590855_0 SMART Elongator protein 3 MiaB NifB - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005923 428.0
CMS1_k127_5595186_0 Belongs to the MEMO1 family K06990 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0032886,GO:0044424,GO:0044464,GO:0050789,GO:0050794,GO:0065007 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006599 278.0
CMS1_k127_5595186_1 Belongs to the universal ribosomal protein uS2 family K02967 GO:0000028,GO:0000447,GO:0000460,GO:0000461,GO:0000462,GO:0000466,GO:0000469,GO:0000478,GO:0000479,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0016070,GO:0016072,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030490,GO:0031123,GO:0031125,GO:0032991,GO:0034470,GO:0034622,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043628,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000001624 247.0
CMS1_k127_5595186_2 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 0.0000000000000000000000000000000000000000000000000000000000000000789 228.0
CMS1_k127_5595186_3 Histidine kinase-like ATPases - - - 0.0000000000000000000000000000000000000000001992 172.0
CMS1_k127_5595186_4 TIGRFAM PAS sensor protein - - - 0.000000000000000000000000000000001896 143.0
CMS1_k127_5595717_0 phosphoglycerate mutase K15635 - 5.4.2.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001862 402.0
CMS1_k127_5595717_1 Cleaves both 3' and 5' ssDNA extremities of branched DNA structures K07503 - - 0.00000000000000000000000000000000000000000000000000003012 196.0
CMS1_k127_5595717_2 conserved protein implicated in secretion - - - 0.0000000000000000000000000000000000000000000000001234 184.0
CMS1_k127_5595717_3 AAA domain (Cdc48 subfamily) - - - 0.0000000000000000000000000003794 118.0
CMS1_k127_5595717_4 vacuolar transport - - - 0.0000000000000004637 89.0
CMS1_k127_5595717_5 AAA domain - - - 0.0000000000000005154 85.0
CMS1_k127_5595717_6 - - - - 0.00000000000003361 81.0
CMS1_k127_5595717_7 methyltransferase - - - 0.000000000001688 75.0
CMS1_k127_5595717_8 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.0000003972 62.0
CMS1_k127_5604365_0 TGS domain K06944 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001621 305.0
CMS1_k127_5604365_1 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center K02992 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000008039 239.0
CMS1_k127_5604365_2 With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits K02950 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000003491 217.0
CMS1_k127_5668430_0 TIGRFAM geranylgeranyl reductase K17830 - 1.3.1.101,1.3.7.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001932 357.0
CMS1_k127_5668430_1 Involved in the binding of tRNA to the ribosomes K02946 - - 0.0000000000000000000000000000000000001686 143.0
CMS1_k127_5668430_2 zinc finger - - - 0.0000000000000000000000000000001156 133.0
CMS1_k127_5668430_3 HxlR-like helix-turn-helix - - - 0.00000000001422 70.0
CMS1_k127_5668430_4 Flavodoxin domain K00230 - 1.3.5.3 0.00000000001659 71.0
CMS1_k127_5668430_5 TM2 domain - - - 0.0001163 49.0
CMS1_k127_5672014_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.10 1.312e-210 670.0
CMS1_k127_5672014_1 PFAM Glycosyl transferase family 2 K07027 - - 0.00000000000000000000000000000000000000000000000003954 186.0
CMS1_k127_5672014_2 DNA polymerase alpha chain like domain - - - 0.000000000000000000000000000000000000000003172 162.0
CMS1_k127_5672014_3 Cytochrome b5-like Heme/Steroid binding domain - - - 0.0000000000000000000174 93.0
CMS1_k127_5672014_4 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 - 6.1.1.16 0.000000000000005211 80.0
CMS1_k127_5672014_5 PFAM glycosyl transferase family 39 - - - 0.00005823 51.0
CMS1_k127_5692023_0 AIR synthase related protein, C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003298 333.0
CMS1_k127_5692023_1 ECF-type riboflavin transporter, S component - - - 0.00000000000000000000000219 110.0
CMS1_k127_5692023_2 COG0463 Glycosyltransferases involved in cell wall biogenesis - - - 0.0000000000000007321 87.0
CMS1_k127_5702601_0 Multicopper oxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005768 397.0
CMS1_k127_5702601_1 ATPases associated with a variety of cellular activities K02003 - - 0.00000000000000000000000000000000000000000000000003658 186.0
CMS1_k127_5702601_2 FtsX-like permease family - - - 0.00000000000000000000000000001582 129.0
CMS1_k127_5702601_3 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes K03118 - - 0.000000000000000001407 96.0
CMS1_k127_5702601_4 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.0000000000005886 72.0
CMS1_k127_570651_0 Cys/Met metabolism PLP-dependent enzyme K01758,K01761 - 4.4.1.1,4.4.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001994 563.0
CMS1_k127_570651_1 Pyridoxal-phosphate dependent enzyme K01697 - 4.2.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003572 442.0
CMS1_k127_570651_2 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 0.000000000000000000000000000000000000000000000000000000000000000001576 229.0
CMS1_k127_570651_3 YHS domain - - - 0.0000000000001251 71.0
CMS1_k127_5710513_0 NADPH-dependent FMN reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006849 287.0
CMS1_k127_5710513_1 PFAM ATP-binding region ATPase domain protein K07678 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001554 304.0
CMS1_k127_5710513_2 Flavoprotein - - - 0.000000000000000000000000000000000000000000000000000001424 197.0
CMS1_k127_5710513_3 Contains one ATP-binding region, ATPase-like domain (IPR003594) - - - 0.000000000000000000000000000000000000000000001099 190.0
CMS1_k127_5710513_4 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K03234 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.00000000000000003745 81.0
CMS1_k127_5718030_0 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000001303 249.0
CMS1_k127_5718030_1 AhpC/TSA family K03564 - 1.11.1.15 0.00000000000000000000000000000000000000000000000002279 184.0
CMS1_k127_5718030_2 Ribbon-helix-helix protein, copG family - - - 0.0000000002008 64.0
CMS1_k127_5718030_3 Ribbon-helix-helix protein, copG family - - - 0.0000001105 55.0
CMS1_k127_5718030_4 membrane - - - 0.0002845 44.0
CMS1_k127_5735633_0 component I K01657 - 4.1.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003897 465.0
CMS1_k127_5735633_1 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766,K13497 - 2.4.2.18,4.1.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000457 350.0
CMS1_k127_5735633_2 protein involved in tolerance to K03926 - - 0.00000000000000000000000003384 111.0
CMS1_k127_5735633_3 Uncharacterised protein family UPF0066 - - - 0.000000000000000000000099 99.0
CMS1_k127_5735633_4 PFAM Indole-3-glycerol phosphate synthase K01609 GO:0003674,GO:0003824,GO:0004425,GO:0016829,GO:0016830,GO:0016831 4.1.1.48 0.000000000000000003097 90.0
CMS1_k127_5735633_5 Belongs to the glycosyl hydrolase 57 family K07405 - 3.2.1.1 0.0001992 50.0
CMS1_k127_5756561_0 Rhodanese-like domain K01069 - 3.1.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001155 434.0
CMS1_k127_5756561_1 Belongs to the UPF0284 family - - - 0.00000000000000000000000000000000000000000000000000000005919 203.0
CMS1_k127_5756561_2 Cytidylyltransferase K19712 - 2.7.7.62 0.000000000000000000000000000000000000000003671 163.0
CMS1_k127_5756561_3 Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate K02233 - 2.7.8.26 0.0000000000000000000000000000000000002209 151.0
CMS1_k127_5756561_4 Thymidylate synthase K00560 - 2.1.1.45 0.00000000000000000000000005836 117.0
CMS1_k127_5802672_0 serine threonine protein kinase - - - 0.00000000000000000000000000000000000004405 151.0
CMS1_k127_5802672_1 Predicted nucleotide-binding protein containing TIR-like domain - - - 0.00000000000004143 84.0
CMS1_k127_5802672_2 PFAM DNA methylase N-4 N-6 K00571,K07316 - 2.1.1.72 0.00000005232 64.0
CMS1_k127_5881050_0 Heat shock 70 kDa protein K04043 - - 1.509e-242 764.0
CMS1_k127_5881050_1 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686,K05516 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005327 375.0
CMS1_k127_5881050_2 PFAM AMP-dependent synthetase and ligase K01895 - 6.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000264 364.0
CMS1_k127_5881050_3 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.000000000000000000000000178 112.0
CMS1_k127_5881050_4 ASPIC and UnbV - - - 0.000000000000000984 91.0
CMS1_k127_5881050_5 S-layer domain protein - - - 0.0000007159 60.0
CMS1_k127_5899498_0 PFAM PUA domain containing protein K07575 GO:0001731,GO:0002181,GO:0002183,GO:0002188,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000001444 119.0
CMS1_k127_5899498_1 - - - - 0.0000000000000000009033 94.0
CMS1_k127_5900556_0 threonine synthase activity K01733,K15527 - 2.5.1.76,4.2.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004478 498.0
CMS1_k127_5900556_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009566 390.0
CMS1_k127_5900556_2 Domain of unknown function (DUF1611_N) Rossmann-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001162 315.0
CMS1_k127_5900556_3 ATPases associated with a variety of cellular activities K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000001322 234.0
CMS1_k127_5900556_4 Uncharacterised protein family UPF0066 - - - 0.00000000000000000000000000000000000000000000000000000000000000001794 226.0
CMS1_k127_5900556_5 ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000037 203.0
CMS1_k127_5900556_6 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.00000000000000004487 97.0
CMS1_k127_5900556_7 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.00000000000004369 87.0
CMS1_k127_5900556_8 Transcriptional regulator - - - 0.00000000000004665 79.0
CMS1_k127_5901723_0 Glycosyl transferase family group 2 - - - 0.0000000000000000000000000000000000000000000000000006249 196.0
CMS1_k127_5901723_1 membrane - - - 0.000000000000000000000000000000000002751 147.0
CMS1_k127_6021265_0 hmm tigr00010 K03424 - - 0.000000000000000000000000000000000000001188 157.0
CMS1_k127_6021265_1 Belongs to the eukaryotic ribosomal protein eS17 family K02962 GO:0000028,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015935,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042274,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.000000006172 61.0
CMS1_k127_6021265_2 MOFRL family K11529 - 2.7.1.165 0.00000007921 57.0
CMS1_k127_6025240_0 PBP superfamily domain K05772 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001549 268.0
CMS1_k127_6025240_1 ATPases associated with a variety of cellular activities K06857 - 3.6.3.55 0.000000000000000000000000000000000000000000000000000000000000000000000000001143 267.0
CMS1_k127_6025240_2 Binding-protein-dependent transport system inner membrane component K05773 - - 0.000000000000000000000000000000000000000000000000005676 190.0
CMS1_k127_6025240_3 NADPH-dependent F420 reductase K06988 - 1.5.1.40 0.00000000000000000000000000000000000000000004571 167.0
CMS1_k127_6025240_4 PFAM Alcohol dehydrogenase K00008 - 1.1.1.14 0.000000000000000000000000000000000000000001638 168.0
CMS1_k127_6025240_5 Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O K05601 - 1.7.99.1 0.000000000000000000000000000000000000007812 149.0
CMS1_k127_6025240_6 molybdate ion transport K02019,K05772 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0042802,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000002819 115.0
CMS1_k127_6025240_7 AAA domain - - - 0.0000000000000000000000002902 115.0
CMS1_k127_6025240_8 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03053 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.00000000000000000001179 99.0
CMS1_k127_6025240_9 TIGRFAM HAD-superfamily hydrolase, subfamily IA, variant K01091 - 3.1.3.18 0.00000000000000005215 89.0
CMS1_k127_6092701_0 - - - - 0.000000000000000000000000000008293 123.0
CMS1_k127_6092701_1 PFAM Blue (type 1) copper domain K18683 GO:0005575,GO:0005623,GO:0042597,GO:0044464 - 0.0005396 50.0
CMS1_k127_6224295_0 COG0145 N-methylhydantoinase A acetone carboxylase beta subunit K01469,K01473 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006518,GO:0006575,GO:0006749,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016810,GO:0016812,GO:0017168,GO:0034641,GO:0043603,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0051186,GO:0071704,GO:1901564 3.5.2.14,3.5.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102 543.0
CMS1_k127_6224295_1 PP-loop family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003416 269.0
CMS1_k127_6224295_2 Alpha-acetolactate decarboxylase K01575 - 4.1.1.5 0.00000000000000000000000000000000000000000000000000002119 197.0
CMS1_k127_6224295_3 - K16788 - - 0.00000000000000000000000000000008277 130.0
CMS1_k127_6224295_4 ABC-type branched-chain amino acid transport systems, periplasmic component K01999 - - 0.00000000000000000000000000000981 129.0
CMS1_k127_6224295_5 Cupin domain - - - 0.0000000000000004783 83.0
CMS1_k127_6224295_6 Broad-specificity nucleoside monophosphate (NMP) kinase that catalyzes the reversible transfer of the terminal phosphate group between nucleoside triphosphates and monophosphates K18532 - 2.7.4.3 0.00000000000002052 79.0
CMS1_k127_6224295_7 alpha/beta hydrolase fold - - - 0.000001129 53.0
CMS1_k127_6224295_8 - - - - 0.000009252 51.0
CMS1_k127_6234827_0 Stabilizes TBP binding to an archaeal box-A promoter. Also responsible for recruiting RNA polymerase II to the pre- initiation complex (DNA-TBP-TFIIB) K03124 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004121 331.0
CMS1_k127_6234827_1 coenzyme F420-1:gamma-L-glutamate ligase activity - - - 0.00000000000002294 75.0
CMS1_k127_6234827_2 - - - - 0.000000000074 65.0
CMS1_k127_6234827_3 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.0001663 53.0
CMS1_k127_676278_0 Translation initiation factor 2 K03237 GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000002493 206.0
CMS1_k127_676278_1 Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits K03236 - - 0.000000000000000000000000000002044 122.0
CMS1_k127_676278_2 - K00960 - 2.7.7.6 0.00000000001972 66.0
CMS1_k127_676278_3 lysine biosynthetic process via aminoadipic acid K05826 - - 0.00002618 48.0
CMS1_k127_748562_0 4Fe-4S binding domain - - - 0.000000000000000000000000000000000000000000000000000000000001166 220.0
CMS1_k127_748562_1 PFAM periplasmic copper-binding - - - 0.00004644 56.0
CMS1_k127_764983_0 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001859 324.0
CMS1_k127_764983_1 Specifically catalyzes the AdoMet-dependent 2'-O-ribose methylation of cytidine at position 56 in tRNAs K07254 - 2.1.1.206 0.00000000000000000000000000000000000000000000000000000000116 206.0
CMS1_k127_764983_2 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 - - 0.0000000000000000000000000000000000000001446 153.0
CMS1_k127_764983_3 Transcription factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Facilitates transcription initiation by enhancing TATA-box recognition by TATA-box-binding protein (Tbp), and transcription factor B (Tfb) and RNA polymerase recruitment. Not absolutely required for transcription in vitro, but particularly important in cases where Tbp or Tfb function is not optimal. It dynamically alters the nucleic acid-binding properties of RNA polymerases by stabilizing the initiation complex and destabilizing elongation complexes. Seems to translocate with the RNA polymerase following initiation and acts by binding to the non template strand of the transcription bubble in elongation complexes K03136 - - 0.0000000000000000000000000000000000002507 146.0
CMS1_k127_764983_4 PUA domain containing protein K07398 - - 0.0000000000000000000000000000000000005935 145.0
CMS1_k127_764983_5 Helix-turn-helix domain K07731 - - 0.0000000000000000000000000000000009791 136.0
CMS1_k127_764983_6 Uncharacterized ACR, COG1993 K09137 - - 0.00000000000000000000000000000003196 129.0
CMS1_k127_764983_7 Contacts the emerging nascent chain on the ribosome K03626 - - 0.00000000000000000005493 93.0
CMS1_k127_764983_8 Helix-turn-helix XRE-family like proteins K03627 - - 0.0000000000000000000726 96.0
CMS1_k127_764983_9 Metal dependent phosphohydrolases with conserved 'HD' motif. K06950 - - 0.0003798 44.0
CMS1_k127_84621_0 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00266 - 1.4.1.13,1.4.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001484 561.0
CMS1_k127_84621_1 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B K00528,K16951 - 1.18.1.2,1.19.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008246 316.0
CMS1_k127_84621_2 COG1522 Transcriptional regulators - - - 0.00000002667 63.0
CMS1_k127_866868_0 PFAM Mechanosensitive ion channel - - - 0.00000000000000000002236 102.0
CMS1_k127_866868_1 PFAM Major Facilitator Superfamily - - - 0.00001926 51.0
CMS1_k127_888957_0 Protein of unknown function (DUF763) K09003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001076 392.0
CMS1_k127_888957_1 Elongator protein 3, MiaB family, Radical SAM K09711 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001815 250.0
CMS1_k127_888957_2 Protein of unknown function (DUF998) - - - 0.000000000001044 76.0
CMS1_k127_888957_3 SMART Parallel beta-helix repeat - - - 0.0000003868 61.0
CMS1_k127_916892_0 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000001736 201.0
CMS1_k127_916892_1 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 - - 0.000000000000000000000000000000000000000000000000001128 193.0
CMS1_k127_916892_2 Binds directly to 23S rRNA. Probably involved in E site tRNA release K02863 GO:0000470,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022625,GO:0022626,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000002999 186.0
CMS1_k127_916892_3 D-aminoacyl-tRNA deacylase with broad substrate specificity. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo K09716 - 3.1.1.96 0.00000000000000000000000000000000000000000001229 171.0
CMS1_k127_916892_4 TIGRFAM ribosomal-protein-alanine acetyltransferase K03789 GO:0003674,GO:0003824,GO:0004596,GO:0005575,GO:0005622,GO:0005623,GO:0006464,GO:0006473,GO:0006474,GO:0006807,GO:0008080,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0019538,GO:0031248,GO:0031365,GO:0032991,GO:0034212,GO:0036211,GO:0043170,GO:0043412,GO:0043543,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0051604,GO:0071704,GO:1901564,GO:1902493,GO:1902494,GO:1990234 2.3.1.128 0.0000000000000000000000000000000000000000001632 163.0
CMS1_k127_916892_5 Transcription elongation factor Spt5 K02601 - - 0.000000000000000000000000000000000000000211 154.0
CMS1_k127_916892_6 Domain of unknown function (DUF2088) - - - 0.0000000162 59.0
CMS1_k127_923209_0 PFAM FAD dependent oxidoreductase K07137 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002821 505.0
CMS1_k127_923209_1 SMART zinc finger, RanBP2-type - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009322 332.0
CMS1_k127_923209_2 - - - - 0.0000000000000000000000001427 112.0
CMS1_k127_923209_3 K COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit - - - 0.0000000000107 74.0
CMS1_k127_966971_0 Iron-sulfur cluster-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001013 407.0
CMS1_k127_966971_1 4Fe-4S single cluster domain K06937 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002548 369.0
CMS1_k127_966971_10 Domain of unknown function (DUF362) - - - 0.000000000000000000000000000000001083 142.0
CMS1_k127_966971_11 HELICc2 K10844 - 3.6.4.12 0.00000000000000000000000001431 112.0
CMS1_k127_966971_12 Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C2 hydroxyl of (S)-3-O-geranylgeranylglyceryl phosphate (GGGP). This reaction is the second ether-bond-formation step in the biosynthesis of archaeal membrane lipids K17105 - 2.5.1.42 0.00000000000000000000000005312 119.0
CMS1_k127_966971_13 PFAM Glycosyl transferase family 2 - - - 0.00000000000000000000001189 112.0
CMS1_k127_966971_14 Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate K02233 - 2.7.8.26 0.000000000000000000002965 104.0
CMS1_k127_966971_15 - - - - 0.00000000002317 69.0
CMS1_k127_966971_16 Methyltransferase domain - - - 0.00002238 55.0
CMS1_k127_966971_17 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042 - 2.3.1.157,2.7.7.23 0.00005348 53.0
CMS1_k127_966971_18 - - - - 0.00005689 52.0
CMS1_k127_966971_2 B12 binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004306 336.0
CMS1_k127_966971_3 B12 binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004552 275.0
CMS1_k127_966971_4 PFAM Aminotransferase class I and II K04720 - 4.1.1.81 0.000000000000000000000000000000000000000000000000000000000000000000000000492 260.0
CMS1_k127_966971_5 aldo keto reductase K07079 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000007771 258.0
CMS1_k127_966971_6 hmm pf01073 K01784 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000000000001028 216.0
CMS1_k127_966971_7 PFAM HhH-GPD family protein K10773 - 4.2.99.18 0.00000000000000000000000000000000000000000001116 170.0
CMS1_k127_966971_8 PFAM Glycosyl transferase, group 1 K06338,K12995 - 2.4.1.348 0.0000000000000000000000000000000000000000005318 171.0
CMS1_k127_966971_9 Glycosyltransferase like family 2 - - - 0.000000000000000000000000000000000000001488 156.0
CMS1_k127_967285_0 PFAM PEGA domain - - - 0.00000000000000000000000000000000000000000000001537 185.0
CMS1_k127_967285_1 Belongs to the RtcB family K14415 GO:0000394,GO:0003674,GO:0003824,GO:0006139,GO:0006388,GO:0006396,GO:0006399,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008380,GO:0008452,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016886,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:1901360 6.5.1.3 0.0000000000000000000000003515 106.0
CMS1_k127_967285_2 - - - - 0.000000008477 64.0
CMS1_k127_976535_0 PFAM Cobyrinic acid a,c-diamide synthase K07321 - - 0.00000000000000000000000000000000000000000000006509 172.0
CMS1_k127_976535_1 PFAM Coenzyme F420 hydrogenase dehydrogenase beta subunit K22174 - 1.1.98.4 0.00000000000000000000000000000000000000006598 164.0
CMS1_k127_998683_0 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis K04479 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000259 206.0
CMS1_k127_998683_1 Oxidoreductase molybdopterin binding domain - - - 0.000000000000000000000000000000000000000000001369 171.0
CMS1_k127_998683_2 Domain of unknown function (DUF296) - - - 0.000000000000000000000000000000000000000000002613 168.0
CMS1_k127_998683_3 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis K04479 - 2.7.7.7 0.00000000000000000000000000001303 120.0
CMS1_k127_998683_4 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.0000514 56.0