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Overview

ID MAG00292
Name CMS1_bin.102
Sample SMP0010
Taxonomy
Kingdom Bacteria
Phylum Pseudomonadota
Class Gammaproteobacteria
Order Thiomicrospirales
Family Thiomicrospiraceae
Genus Thiomicrorhabdus
Species
Assembly information
Completeness (%) 77.61
Contamination (%) 2.09
GC content (%) 43.0
N50 (bp) 9,127
Genome size (bp) 1,808,828

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes1709

Gene name Description KEGG GOs EC E-value Score Sequence
CMS1_k127_1023706_0 LppC putative lipoprotein K07121 - - 2.665e-279 865.0
CMS1_k127_1023706_1 D-Ala-D-Ala carboxypeptidase 3 (S13) family K07259 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000187 583.0
CMS1_k127_1023706_2 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001054 529.0
CMS1_k127_1023706_3 Specifically methylates the guanosine in position 1516 of 16S rRNA K15984 - 2.1.1.242 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003282 496.0
CMS1_k127_1023706_4 Belongs to the UPF0102 family K07460 - - 0.000000000000000000000000000000000000003223 147.0
CMS1_k127_1031071_0 Rhodanese Homology Domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001553 488.0
CMS1_k127_1031071_1 RNA-DNA hybrid ribonuclease activity K02343,K03469 - 2.7.7.7,3.1.26.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006487 289.0
CMS1_k127_1031071_2 Domain of unknown function (DUF1841) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001211 280.0
CMS1_k127_1031071_3 response regulator K20977 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004673 263.0
CMS1_k127_1034070_0 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 3.883e-212 660.0
CMS1_k127_1034070_1 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004593 363.0
CMS1_k127_1034070_2 PFAM Bacterial regulatory protein, arsR family K03892 - - 0.00000000000000000000008205 98.0
CMS1_k127_106229_0 CoA binding domain - - - 0.0 1257.0
CMS1_k127_106229_1 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 1.598e-294 904.0
CMS1_k127_106229_2 Response regulator containing a CheY-like receiver domain and an HD-GYP domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002273 586.0
CMS1_k127_106229_3 PFAM Histone deacetylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002372 405.0
CMS1_k127_106229_4 Uncharacterised protein family UPF0066 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003713 392.0
CMS1_k127_106229_5 Protein of unknown function (DUF938) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008488 282.0
CMS1_k127_106229_6 Nucleoside 2-deoxyribosyltransferase YtoQ - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004767 268.0
CMS1_k127_106229_7 Domain of unknown function (DUF4156) - - - 0.0000000000000000000000000000000000000000000000001552 178.0
CMS1_k127_1066576_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.0 1191.0
CMS1_k127_1067547_0 Heat shock 70 kDa protein K04043 - - 0.0 1182.0
CMS1_k127_1067547_1 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 2.7e-205 640.0
CMS1_k127_1067547_2 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 - 1.17.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001375 504.0
CMS1_k127_1067547_3 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 GO:0000988,GO:0000989,GO:0003674,GO:0003756,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006457,GO:0006458,GO:0006725,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010556,GO:0015035,GO:0015036,GO:0016020,GO:0016032,GO:0016043,GO:0016491,GO:0016667,GO:0016853,GO:0016860,GO:0016864,GO:0016989,GO:0019219,GO:0019222,GO:0022607,GO:0031323,GO:0031326,GO:0032991,GO:0034641,GO:0034645,GO:0042026,GO:0043167,GO:0043169,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044403,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0050789,GO:0050794,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0051171,GO:0051252,GO:0051704,GO:0055114,GO:0060255,GO:0061077,GO:0065003,GO:0065007,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0140096,GO:0140110,GO:1901360,GO:1901576,GO:1903506,GO:2001141 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002678 473.0
CMS1_k127_1067547_4 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000179 378.0
CMS1_k127_1067547_5 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007751 333.0
CMS1_k127_1103111_0 Belongs to the alpha-IPM synthase homocitrate synthase family K01649 - 2.3.3.13 4.68e-319 978.0
CMS1_k127_1103111_1 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003318 517.0
CMS1_k127_1103111_2 DsrE/DsrF/DrsH-like family - - - 0.0000000000000000000000000000000001961 132.0
CMS1_k127_1106682_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1515.0
CMS1_k127_1106682_1 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 - - 3.39e-263 812.0
CMS1_k127_1106682_2 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 1.299e-259 803.0
CMS1_k127_1106682_3 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002339 396.0
CMS1_k127_1117840_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 0.0 1573.0
CMS1_k127_1117840_1 PFAM Phosphoribulokinase uridine kinase K00855 - 2.7.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002735 599.0
CMS1_k127_1117840_2 pathogenesis - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002476 359.0
CMS1_k127_1117840_3 Domain of unknown function (DUF389) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006009 304.0
CMS1_k127_1121070_0 SNARE associated Golgi protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000342 323.0
CMS1_k127_1121070_1 Protein of unknown function (DUF3465) - - - 0.00000000000000000000000000000000000000000000000000000000000009401 217.0
CMS1_k127_1121070_2 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.0000000000000000000000000000001503 126.0
CMS1_k127_1121070_3 - K01179 - 3.2.1.4 0.0000000000007804 73.0
CMS1_k127_1167961_0 Inositol monophosphatase K01092 - 3.1.3.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003243 546.0
CMS1_k127_1167961_1 Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA K02533,K15396 - 2.1.1.200 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001846 480.0
CMS1_k127_1167961_2 TIGRFAM Serine O-acetyltransferase K00640 - 2.3.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001368 402.0
CMS1_k127_1167961_3 FR47-like protein K03789 - 2.3.1.128 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008197 285.0
CMS1_k127_118074_0 Fatty acid desaturase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002951 602.0
CMS1_k127_118074_1 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004888 558.0
CMS1_k127_118074_2 NMT1-like family K02051 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009394 522.0
CMS1_k127_118074_3 Metallo-beta-lactamase superfamily K13075 - 3.1.1.81 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001478 506.0
CMS1_k127_118074_4 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003873 495.0
CMS1_k127_118074_5 Xylose isomerase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002287 437.0
CMS1_k127_118074_6 PFAM Glutamine amidotransferase class-I - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000408 402.0
CMS1_k127_118074_7 - - - - 0.00000000000000000000000004205 111.0
CMS1_k127_1186248_0 Binding-protein-dependent transport system inner membrane component K02050 - - 7.604e-207 644.0
CMS1_k127_1186248_1 ABC transporter K02049 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002877 589.0
CMS1_k127_1186248_2 NikR C terminal nickel binding domain K07722 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004022 289.0
CMS1_k127_1186248_3 Domain of unknown function (DUF1989) K09967 - - 0.000000000000000000000000000000000000000000000001945 175.0
CMS1_k127_1189981_0 Catalyzes the ferrous insertion into protoporphyrin IX K01772 - 4.99.1.1,4.99.1.9 1.241e-247 766.0
CMS1_k127_1189981_1 - - - - 4.563e-225 719.0
CMS1_k127_1189981_2 Sulphur transport K07112 - - 2.042e-207 647.0
CMS1_k127_1189981_3 FolM Alternative dihydrofolate reductase 1 K13938 - 1.5.1.3,1.5.1.50 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002453 430.0
CMS1_k127_1189981_4 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001779 400.0
CMS1_k127_1189981_5 Uncharacterized protein domain (DUF2202) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001654 299.0
CMS1_k127_1235369_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 0.0 1367.0
CMS1_k127_1235369_1 Part of a membrane complex involved in electron transport K03617 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003823 348.0
CMS1_k127_1235369_2 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.00000000000000000000000000000000000000000000000000000000000000000000325 235.0
CMS1_k127_1235369_3 Part of a membrane complex involved in electron transport K03616 - - 0.000000000000000000000000000000000000000000000000000000008057 198.0
CMS1_k127_1235369_4 antisigma factor binding K04749,K20978 - - 0.000000000000000000000000000000000000000002504 156.0
CMS1_k127_1289204_0 TonB-dependent Receptor Plug Domain - - - 1.054e-258 814.0
CMS1_k127_1289204_1 A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004238 473.0
CMS1_k127_1289204_2 O-methyltransferase K00573 - 2.1.1.77 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001293 377.0
CMS1_k127_1289204_3 nicotinamide mononucleotide transporter K03811 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001731 342.0
CMS1_k127_1289204_4 YKOF-related Family - - - 0.0000000000000000000000003239 107.0
CMS1_k127_1298381_0 DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation K05592 - 3.6.4.13 0.0 1146.0
CMS1_k127_1298381_1 MoeA N-terminal region (domain I and II) K03750 - 2.10.1.1 2.887e-246 765.0
CMS1_k127_1298381_2 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008039 587.0
CMS1_k127_1298381_3 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006938 409.0
CMS1_k127_1298381_4 Molybdenum cofactor biosynthesis protein MoaE K03635 - 2.8.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008631 314.0
CMS1_k127_1298381_5 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001047 302.0
CMS1_k127_1298381_6 Possibly involved in utilization of glycolate and propanediol - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001072 292.0
CMS1_k127_1298381_7 GIY-YIG catalytic domain K07461 - - 0.0000000000000000000000000000000000000000000000000004449 184.0
CMS1_k127_1298381_8 Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin K03636 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006732,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0018130,GO:0019538,GO:0019637,GO:0019720,GO:0043170,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0051189,GO:0071704,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000005253 151.0
CMS1_k127_1304659_0 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 1.166e-314 966.0
CMS1_k127_1304659_1 PhoH-like protein K06217 - - 9.246e-217 674.0
CMS1_k127_1304659_2 CBS domain K06189 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001445 534.0
CMS1_k127_1304659_3 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007925 288.0
CMS1_k127_1304659_5 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 0.000000000000000000000000007099 109.0
CMS1_k127_1318988_0 Phosphate acyltransferases K05939 - 2.3.1.40,6.2.1.20 0.0 1325.0
CMS1_k127_1318988_1 peptidase K01414 - 3.4.24.70 0.0 1283.0
CMS1_k127_1318988_10 PFAM ATPase associated with various cellular activities K03924 - - 1.023e-204 638.0
CMS1_k127_1318988_11 von Willebrand factor, type A K07114 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002082 606.0
CMS1_k127_1318988_12 Major Facilitator Superfamily K05939 - 2.3.1.40,6.2.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001013 608.0
CMS1_k127_1318988_13 Protein of unknown function DUF58 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001682 590.0
CMS1_k127_1318988_14 - K09004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001467 364.0
CMS1_k127_1318988_15 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007472 334.0
CMS1_k127_1318988_16 Domain of unknown function (DUF4381) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001129 311.0
CMS1_k127_1318988_17 - K09004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001552 272.0
CMS1_k127_1318988_18 DsrE/DsrF-like family K09004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003969 272.0
CMS1_k127_1318988_19 Secondary thiamine-phosphate synthase enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000008145 226.0
CMS1_k127_1318988_2 Belongs to the formate--tetrahydrofolate ligase family K01938 - 6.3.4.3 0.0 1130.0
CMS1_k127_1318988_3 von Willebrand factor, type A K07114 - - 1.059e-320 994.0
CMS1_k127_1318988_4 Oxygen tolerance - - - 2.063e-308 951.0
CMS1_k127_1318988_5 FAD linked oxidases, C-terminal domain - - - 1.03e-306 942.0
CMS1_k127_1318988_6 Cysteine-rich domain K11473 - - 1.613e-263 812.0
CMS1_k127_1318988_7 phosphate-selective porin O and P - - - 6.443e-257 795.0
CMS1_k127_1318988_8 Aminotransferase class-V K00830 - 2.6.1.44,2.6.1.45,2.6.1.51 3.164e-240 743.0
CMS1_k127_1318988_9 FAD binding domain - - - 2.745e-213 663.0
CMS1_k127_1319100_0 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07305,K12267 - 1.8.4.11,1.8.4.12 1.418e-285 878.0
CMS1_k127_1319100_1 Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine K04069 - 1.97.1.4 1.729e-212 663.0
CMS1_k127_1319100_2 NlpC/P60 family K13695 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002828 274.0
CMS1_k127_1319100_3 Belongs to the MEMO1 family K06990 - - 0.00000000000000000000000000000000003834 138.0
CMS1_k127_1333974_0 Domain of unknown function (DUF3400) - - - 0.0 2528.0
CMS1_k127_1333974_1 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 1.081e-299 920.0
CMS1_k127_1333974_2 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K17713 - - 0.00000000000000000000000000000000000000000000002711 170.0
CMS1_k127_1333974_3 cytochrome - - - 0.00000000000001667 73.0
CMS1_k127_1437477_0 PFAM FAD dependent oxidoreductase K00116 - 1.1.5.4 7.047e-291 893.0
CMS1_k127_1437477_1 Converts GTP to 7,8-dihydroneopterin triphosphate K09007 - 3.5.4.16 2.727e-201 628.0
CMS1_k127_1437477_2 PFAM CobW HypB UreG, nucleotide-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009389 576.0
CMS1_k127_1437477_3 PFAM Bacterial regulatory protein, arsR family K03892 - - 0.0000000000000000001648 89.0
CMS1_k127_1464608_0 Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor K00833 - 2.6.1.62 2.029e-259 802.0
CMS1_k127_1464608_1 ubiE/COQ5 methyltransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008041 379.0
CMS1_k127_1464608_2 PFAM OsmC-like protein K07397 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004843 265.0
CMS1_k127_1464608_3 Membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000002366 233.0
CMS1_k127_1464608_4 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.000000000000000000505 87.0
CMS1_k127_1464608_5 - - - - 0.00000000004998 64.0
CMS1_k127_1472218_0 Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme K02302 - 1.3.1.76,2.1.1.107,4.99.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001774 325.0
CMS1_k127_1472218_1 Sulfur oxidation protein SoxY K17226 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004463 269.0
CMS1_k127_1472218_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000001586 218.0
CMS1_k127_1472218_3 Sulphur oxidation protein SoxZ K17227 - - 0.000000000000000000000000000000000000000000000000001858 183.0
CMS1_k127_1504139_0 MotA/TolQ/ExbB proton channel family K02556 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004063 561.0
CMS1_k127_1504139_1 Membrane MotB of proton-channel complex MotA/MotB K02557 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005334 553.0
CMS1_k127_1504139_2 Controls the rotational direction of flagella during chemotaxis K02415 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007216 283.0
CMS1_k127_1504139_3 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002368 278.0
CMS1_k127_153988_0 Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide-linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N-acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides K01207 - 3.2.1.52 3.759e-223 692.0
CMS1_k127_153988_1 Mechanosensitive ion channel K16052 - - 1.181e-211 660.0
CMS1_k127_153988_2 Binding-protein-dependent transport system inner membrane component K02034 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000142 474.0
CMS1_k127_153988_3 MOSC domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006968 252.0
CMS1_k127_1557007_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 0.0 1639.0
CMS1_k127_1557007_1 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 - - 6.059e-307 943.0
CMS1_k127_1557007_2 Belongs to the aspartokinase family K00928 - 2.7.2.4 5.288e-244 755.0
CMS1_k127_1557007_3 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 1.546e-209 652.0
CMS1_k127_1557007_4 Modulates RecA activity K03565 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002226 341.0
CMS1_k127_1557007_5 Belongs to the CinA family K03743 - 3.5.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009266 284.0
CMS1_k127_1564251_0 Molecular chaperone. Has ATPase activity K04079 - - 0.0 1197.0
CMS1_k127_1564251_1 ABC transporter, ATP-binding protein - - - 0.0 1022.0
CMS1_k127_1564251_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K03407 - 2.7.13.3 5.621e-275 849.0
CMS1_k127_1564251_3 Domain of unknown function DUF302 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004915 548.0
CMS1_k127_1564251_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007385 331.0
CMS1_k127_1564251_5 Carbon-nitrogen hydrolase K13566 - 3.5.1.3 0.00000000000000000000000000000000000000000000000001144 181.0
CMS1_k127_1567658_0 diguanylate cyclase - - - 1.785e-266 828.0
CMS1_k127_1567658_1 Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity K14540 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007676 600.0
CMS1_k127_1567658_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005,K13888 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002473 344.0
CMS1_k127_1567658_3 ABC-type antimicrobial peptide transport system, permease component K02004,K05685 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008389 315.0
CMS1_k127_1567658_4 Uncharacterized protein conserved in bacteria (DUF2058) K09912 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000109 303.0
CMS1_k127_1567658_5 Part of the tripartite efflux system MacAB-TolC. MacB is a non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides K02003,K05685 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005859 304.0
CMS1_k127_1567658_6 Protein with unknown function (DUF469) K09923 - - 0.000000000000000000000000000000000000000000000000000000000000002461 218.0
CMS1_k127_1567658_7 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.00000000000000000000000000000007777 125.0
CMS1_k127_1809347_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K01139 - 2.7.6.5,3.1.7.2 0.0 1369.0
CMS1_k127_1809347_1 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 0.0 1310.0
CMS1_k127_1809347_10 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 - 2.7.1.71 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003332 333.0
CMS1_k127_1809347_11 endoribonuclease L-PSP - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002306 245.0
CMS1_k127_1809347_12 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 - 2.7.7.6 0.00000000000000000000000000000000000000001252 153.0
CMS1_k127_1809347_13 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735 - 4.2.3.4 0.00000001528 55.0
CMS1_k127_1809347_2 Ammonium Transporter Family K03320 - - 6.963e-289 898.0
CMS1_k127_1809347_3 Belongs to the DegT DnrJ EryC1 family K19715 GO:0000271,GO:0003674,GO:0003824,GO:0005975,GO:0005976,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0016051,GO:0043170,GO:0044238,GO:0071704,GO:1901576 2.6.1.109 1.823e-252 779.0
CMS1_k127_1809347_4 HI0933-like protein K07007 - - 1.027e-238 741.0
CMS1_k127_1809347_5 PFAM Iron-containing alcohol dehydrogenase K19714 GO:0003674,GO:0003824,GO:0004022,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0016491,GO:0016614,GO:0016616,GO:0044424,GO:0044444,GO:0044464,GO:0055114 1.1.3.48 1.022e-234 726.0
CMS1_k127_1809347_6 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 2.765e-227 708.0
CMS1_k127_1809347_7 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000256 494.0
CMS1_k127_1809347_8 Rhodanese-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003532 379.0
CMS1_k127_1809347_9 Essential for recycling GMP and indirectly, cGMP K00942 - 2.7.4.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000976 374.0
CMS1_k127_181551_0 COG2200 FOG EAL domain K21973 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006531 421.0
CMS1_k127_181551_1 Uncharacterized protein conserved in bacteria (DUF2141) - - - 0.000000000000000000000000000000000000000000000000000000000000000000002509 238.0
CMS1_k127_181551_3 Transglycosylase associated protein - - - 0.000000000000000000006986 92.0
CMS1_k127_1869318_0 homoserine dehydrogenase K00003 - 1.1.1.3 2.537e-270 833.0
CMS1_k127_1869318_1 Protein conserved in bacteria - - - 5.06e-210 657.0
CMS1_k127_1869318_2 Threonine synthase K01733 - 4.2.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001505 596.0
CMS1_k127_1869318_3 PFAM Aminotransferase class I and II K14261 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004528 382.0
CMS1_k127_1883115_0 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 9.358e-266 820.0
CMS1_k127_1883115_1 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00283 - 1.4.4.2 4.144e-214 666.0
CMS1_k127_1883115_2 ACT domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000157 311.0
CMS1_k127_189148_0 TamB, inner membrane protein subunit of TAM complex K09800 - - 0.0 1969.0
CMS1_k127_189148_1 Large exoproteins involved in heme utilization or adhesion - - - 0.0 1208.0
CMS1_k127_189148_10 molecular chaperone K05516 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001353 561.0
CMS1_k127_189148_11 Iron-regulated protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004515 473.0
CMS1_k127_189148_12 Enoyl-(Acyl carrier protein) reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005469 421.0
CMS1_k127_189148_13 transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001532 370.0
CMS1_k127_189148_2 Outer membrane protein beta-barrel family K02014 - - 0.0 1176.0
CMS1_k127_189148_3 PFAM Surface antigen K07278 - - 0.0 1028.0
CMS1_k127_189148_4 malic enzyme K00027 - 1.1.1.38 4.945e-242 751.0
CMS1_k127_189148_5 Part of the tripartite ATP-independent periplasmic (TRAP) transport system - - - 1.423e-233 724.0
CMS1_k127_189148_6 HDOD domain - - - 1.002e-220 688.0
CMS1_k127_189148_7 Belongs to the UPF0176 family K07146 - - 1.027e-196 615.0
CMS1_k127_189148_8 D-isomer specific 2-hydroxyacid dehydrogenase K03778 - 1.1.1.28 3.621e-196 614.0
CMS1_k127_189148_9 Cupin-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001563 586.0
CMS1_k127_1919031_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 - - 0.0 1140.0
CMS1_k127_1919031_1 Diguanylate cyclase K21023 - 2.7.7.65 0.0 1054.0
CMS1_k127_1919031_10 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 4.183e-206 644.0
CMS1_k127_1919031_11 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 9.786e-201 627.0
CMS1_k127_1919031_12 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001276 585.0
CMS1_k127_1919031_13 ABC transporter K02065 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005958 539.0
CMS1_k127_1919031_14 PFAM sodium calcium exchanger K07301 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001766 531.0
CMS1_k127_1919031_15 ABC transporter, ATP-binding protein K06861 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001693 476.0
CMS1_k127_1919031_16 Transport permease protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003655 477.0
CMS1_k127_1919031_17 ABC transporter permease K02066 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003093 474.0
CMS1_k127_1919031_18 NGG1p interacting factor 3 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003078 458.0
CMS1_k127_1919031_19 PFAM Cytochrome C1 K00413 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000206 411.0
CMS1_k127_1919031_2 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP K02837 - - 0.0 1017.0
CMS1_k127_1919031_20 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00411 - 1.10.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009065 389.0
CMS1_k127_1919031_21 Belongs to the ompA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001008 389.0
CMS1_k127_1919031_22 Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity K00765 - 2.4.2.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004553 373.0
CMS1_k127_1919031_23 Protein of unknown function DUF72 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000105 363.0
CMS1_k127_1919031_24 Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate K03270 - 3.1.3.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001685 349.0
CMS1_k127_1919031_25 toluene tolerance K07323 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005938 349.0
CMS1_k127_1919031_26 Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm K09774 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002962 326.0
CMS1_k127_1919031_27 Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. Facilitates the transfer of LPS from the inner membrane to the periplasmic protein LptA. Could be a docking site for LptA K11719 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000748 313.0
CMS1_k127_1919031_28 MlaD protein K02067 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004668 277.0
CMS1_k127_1919031_29 Preprotein translocase, YajC subunit K03210 - - 0.0000000000000000000000000000000000000000000000000000000000000007131 219.0
CMS1_k127_1919031_3 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 8.261e-284 874.0
CMS1_k127_1919031_30 Sigma 54 modulation protein K05808 - - 0.0000000000000000000000000000000000000000000000000000000000001864 212.0
CMS1_k127_1919031_31 Acyltransferase K00655 - 2.3.1.51 0.00000000000000000000000000000000000000000000000000000000002147 214.0
CMS1_k127_1919031_33 2 iron, 2 sulfur cluster binding K07390 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464,GO:0048037,GO:0051536,GO:0051537,GO:0051540 - 0.000000000000000000000000000000004074 129.0
CMS1_k127_1919031_35 Conserved region in glutamate synthase - - - 0.00002074 47.0
CMS1_k127_1919031_4 Acts as a magnesium transporter K06213 - - 4.999e-273 842.0
CMS1_k127_1919031_5 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 - 1.1.1.23 1.922e-270 833.0
CMS1_k127_1919031_6 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00412 - - 3.736e-266 820.0
CMS1_k127_1919031_7 Belongs to the EPSP synthase family. MurA subfamily K00790 - 2.5.1.7 5.237e-265 818.0
CMS1_k127_1919031_8 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 7.545e-248 765.0
CMS1_k127_1919031_9 Long-chain fatty acid transport protein K06076 - - 7.803e-242 751.0
CMS1_k127_1943813_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 1.584e-295 912.0
CMS1_k127_1943813_1 Alginate export - - - 1.018e-242 753.0
CMS1_k127_1992456_0 PFAM aminotransferase class-III K01845 - 5.4.3.8 2.772e-271 836.0
CMS1_k127_1992456_1 Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate K01807 - 5.3.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001647 424.0
CMS1_k127_1992456_2 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 - 2.5.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004553 373.0
CMS1_k127_1992456_3 PFAM Copper chaperone SCO1 SenC K07152 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005552 346.0
CMS1_k127_1992456_4 Thioredoxin-like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009791 314.0
CMS1_k127_1992456_6 Copper chaperone PCu(A)C K09796 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000009432 295.0
CMS1_k127_1992456_7 PFAM TonB-dependent Receptor K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000108 267.0
CMS1_k127_1992456_8 protein conserved in bacteria K09906 GO:0003674,GO:0003824,GO:0004497,GO:0005488,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016705,GO:0016709,GO:0017185,GO:0018126,GO:0018193,GO:0018205,GO:0019538,GO:0036211,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0043687,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0046872,GO:0055114,GO:0071704,GO:0072580,GO:1901260,GO:1901564 - 0.00000000000000000000000000000000001495 138.0
CMS1_k127_2004764_0 TIGRFAM aminopeptidase N, Escherichia coli type K01256 - 3.4.11.2 0.0 1641.0
CMS1_k127_2004764_1 peptidoglycan biosynthetic process - - - 9.81e-265 821.0
CMS1_k127_2004764_10 Chemotaxis protein K03415 - - 0.000000000000000000000000000000003395 128.0
CMS1_k127_2004764_3 Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P-ring assembly K02386 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001194 393.0
CMS1_k127_2004764_4 PilZ domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001437 355.0
CMS1_k127_2004764_5 OmpA family K03640 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001258 314.0
CMS1_k127_2004764_6 Protein conserved in bacteria K09860 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005019 296.0
CMS1_k127_2004764_9 COG2747 Negative regulator of flagellin synthesis (anti-sigma28 factor) K02398 - - 0.000000000000000000000000000000000000000002626 156.0
CMS1_k127_2010628_0 PFAM CBS domain - - - 3.383e-224 696.0
CMS1_k127_2010628_1 Inositol monophosphatase K01092 - 3.1.3.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001731 466.0
CMS1_k127_2020267_0 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 0.0 1002.0
CMS1_k127_2020267_1 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 - 4.2.1.20 3.086e-259 800.0
CMS1_k127_2020267_10 RNA-binding protein K07574 - - 0.00000000000000000000000000000000000000000000000000000000006698 204.0
CMS1_k127_2020267_11 peptidoglycan binding K01286,K02450,K20074 - 3.1.3.16,3.4.16.4 0.000000000000000000000001774 109.0
CMS1_k127_2020267_2 Catalyzes the formation of L-homocysteine from O- succinyl-L-homoserine (OSHS) and hydrogen sulfide K10764 - - 3.877e-245 758.0
CMS1_k127_2020267_3 Belongs to the folylpolyglutamate synthase family K11754 - 6.3.2.12,6.3.2.17 1.461e-235 735.0
CMS1_k127_2020267_4 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 1.587e-213 664.0
CMS1_k127_2020267_5 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003567 559.0
CMS1_k127_2020267_6 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005509 537.0
CMS1_k127_2020267_7 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 - 5.4.99.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003953 522.0
CMS1_k127_2020267_8 Belongs to the TrpF family K01817 - 5.3.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001865 382.0
CMS1_k127_2020267_9 Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit K02427 - 2.1.1.166 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002001 357.0
CMS1_k127_2031834_0 Peptidase M16C associated K06972 - - 0.0 1864.0
CMS1_k127_2031834_1 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 0.0 1324.0
CMS1_k127_2031834_2 Cupin superfamily protein K18850 - 1.14.11.47 8.954e-250 771.0
CMS1_k127_2031834_3 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 - 5.4.99.25 4.735e-198 618.0
CMS1_k127_2031834_4 Tellurite resistance protein TehB - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000155 511.0
CMS1_k127_2031834_5 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001556 358.0
CMS1_k127_2031834_6 cyclic nucleotide-binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001924 319.0
CMS1_k127_2031834_7 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.0000000000000000000000000000000000000000000000000000000000000000000008953 237.0
CMS1_k127_2031834_8 5-carboxymethyl-2-hydroxymuconate isomerase K01826 - 5.3.3.10 0.0000000000000000000000000000000000000000000000000000034 192.0
CMS1_k127_2031834_9 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 - - 0.000000000000000000000000000000000000000000007497 163.0
CMS1_k127_2068428_0 ATP-dependent helicase K03578 - 3.6.4.13 3.055e-212 661.0
CMS1_k127_2068428_1 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009403 456.0
CMS1_k127_2068428_2 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease K02342 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002909 450.0
CMS1_k127_2068428_3 methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001207 370.0
CMS1_k127_2068428_4 Peptidyl-prolyl cis-trans isomerase K03775 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005067 271.0
CMS1_k127_2073682_0 Belongs to the peptidase M16 family K07263 - - 2.284e-269 833.0
CMS1_k127_2073682_1 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03110 - - 1.93e-217 679.0
CMS1_k127_2073682_2 Protein of unknown function (DUF2914) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001301 473.0
CMS1_k127_2073682_3 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002526 381.0
CMS1_k127_2073682_4 Peptidase M16 K07263 - - 0.0000000000000000000000000000000000000000001689 159.0
CMS1_k127_2091577_0 PFAM AsmA family K07289 - - 4.654e-267 828.0
CMS1_k127_2091577_1 Amino Acid - - - 8.747e-205 643.0
CMS1_k127_2091577_2 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002678 465.0
CMS1_k127_2091577_3 Uncharacterized protein conserved in bacteria (DUF2062) K09928 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007319 338.0
CMS1_k127_2091577_4 Bacterial protein of unknown function (DUF924) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009724 323.0
CMS1_k127_2091577_5 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 0.00000000003442 63.0
CMS1_k127_2131699_0 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K07708 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002152 601.0
CMS1_k127_2131699_1 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002006 457.0
CMS1_k127_2131699_2 iron ion homeostasis K03709,K04758,K09819 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005127 339.0
CMS1_k127_2131699_3 - - - - 0.000000000000000000000000000000000000000001834 156.0
CMS1_k127_2135072_0 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 - - 0.0 1072.0
CMS1_k127_2135072_1 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 2.258e-275 849.0
CMS1_k127_2135072_2 Prephenate dehydrogenase K00210,K04517 - 1.3.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006584 524.0
CMS1_k127_2135072_3 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002641 414.0
CMS1_k127_2135072_4 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 - 2.7.4.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002543 394.0
CMS1_k127_2135072_5 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K05788 - - 0.00000000000000000000000000000000000000005253 151.0
CMS1_k127_2168668_0 DNA alkylation repair - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005032 535.0
CMS1_k127_2168668_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005975 476.0
CMS1_k127_2168668_2 pseudouridine synthase Rlu family protein K06177 GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022613,GO:0031118,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 5.4.99.28,5.4.99.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007241 419.0
CMS1_k127_2168668_3 FKBP-type peptidyl-prolyl cis-trans isomerase K03775 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007998 305.0
CMS1_k127_2168668_4 Belongs to the UPF0260 family K09160 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003077 286.0
CMS1_k127_2168668_5 PFAM Uncharacterised protein family (UPF0093) K08973 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001279 250.0
CMS1_k127_2181418_0 Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties K00688 - 2.4.1.1 1.409e-211 659.0
CMS1_k127_2181418_1 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 - 2.4.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001851 475.0
CMS1_k127_2181502_0 FtsX-like permease family K02004 - - 0.0 1292.0
CMS1_k127_2181502_1 HDOD domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001374 489.0
CMS1_k127_2181502_2 ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004344 426.0
CMS1_k127_2181502_3 COG2755 Lysophospholipase L1 and related esterases K10804 GO:0003674,GO:0003824,GO:0004620,GO:0004622,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0016289,GO:0016290,GO:0016298,GO:0016787,GO:0016788,GO:0016790,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0042802,GO:0043170,GO:0044238,GO:0044464,GO:0047617,GO:0052689,GO:0071704,GO:0140096,GO:1901564 3.1.1.5 0.00000000000000000000000000000000000000000000000000000000000000000001402 240.0
CMS1_k127_2181502_4 - - - - 0.0002535 50.0
CMS1_k127_2182243_0 Belongs to the mannose-6-phosphate isomerase type 2 family K00971,K16011 - 2.7.7.13,5.3.1.8 9.416e-288 886.0
CMS1_k127_2182243_1 Fad linked oxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007488 464.0
CMS1_k127_2182243_2 short-chain dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000154 445.0
CMS1_k127_2182243_3 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005504 314.0
CMS1_k127_219394_0 Mechanosensitive ion channel K05802 - - 0.0 1759.0
CMS1_k127_219394_1 Bacterial protein of unknown function (DUF839) K07093 - - 1.236e-298 925.0
CMS1_k127_219394_10 Belongs to the bacterial ribosomal protein bL33 family K02913 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042221,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046677,GO:0050896,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000001408 102.0
CMS1_k127_219394_11 Protein of unknown function (DUF1461) - - - 0.0007178 45.0
CMS1_k127_219394_2 Cytochrome c - - - 1.711e-298 922.0
CMS1_k127_219394_3 Bacterial periplasmic substrate-binding proteins - - - 1.745e-284 900.0
CMS1_k127_219394_4 Belongs to the UPF0758 family K03630 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001881 433.0
CMS1_k127_219394_5 Cytochrome B561 K12262 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003267 334.0
CMS1_k127_219394_6 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006177 324.0
CMS1_k127_219394_7 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 - 3.2.2.23,4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007572 272.0
CMS1_k127_219394_8 Thioesterase-like superfamily K07107 - - 0.0000000000000000000000000000000000000000000001277 171.0
CMS1_k127_219394_9 Belongs to the bacterial ribosomal protein bL28 family K02902 - - 0.000000000000000000000000000000000000000002387 156.0
CMS1_k127_2197532_0 Type II and III secretion system protein K02453 - - 6.125e-300 925.0
CMS1_k127_2197532_1 Type II IV secretion system protein K02454,K02652 - - 3.32e-286 882.0
CMS1_k127_2197532_2 TIGRFAM general secretion pathway protein F K02455 - - 7.259e-235 730.0
CMS1_k127_2197532_3 Type II secretion system (T2SS), protein G K02456 - - 0.000000000000000000000000000000000000000000000000000000000000001068 220.0
CMS1_k127_2228077_0 Belongs to the peptidase S16 family - - - 4.38e-281 885.0
CMS1_k127_2228077_1 Domain of unknown function (DUF389) - - - 1.723e-253 786.0
CMS1_k127_2228077_10 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Catalyzes the conversion of L-threonine, HCO(3)(-) CO(2) and ATP to give threonylcarbamoyl-AMP (TC-AMP) as the acyladenylate intermediate, with the release of diphosphate K07566 - 2.7.7.87 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000135 318.0
CMS1_k127_2228077_11 Belongs to the HSP15 family K04762 - - 0.000000000000000000000000000000000000000000000000000000000000000000003324 235.0
CMS1_k127_2228077_2 Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily K00121 - 1.1.1.1,1.1.1.284 3.243e-233 724.0
CMS1_k127_2228077_3 Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen-IX K00228 GO:0003674,GO:0005488,GO:0005515,GO:0042802,GO:0042803,GO:0046983 1.3.3.3 1.722e-210 654.0
CMS1_k127_2228077_4 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002395 561.0
CMS1_k127_2228077_5 Putative esterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009739 538.0
CMS1_k127_2228077_6 PFAM peptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002409 482.0
CMS1_k127_2228077_7 Protein of unknown function (DUF3581) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003363 470.0
CMS1_k127_2228077_8 Protein of unknown function (DUF4197) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007686 410.0
CMS1_k127_2228077_9 2OG-Fe(II) oxygenase K07394 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001493 400.0
CMS1_k127_233152_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 1.846e-206 642.0
CMS1_k127_233152_1 O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway K00568 - 2.1.1.222,2.1.1.64 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005492 469.0
CMS1_k127_233152_2 PFAM Haloacid dehalogenase-like hydrolase K22292 - 3.1.3.105 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007653 448.0
CMS1_k127_233152_3 short-chain dehydrogenase reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001335 402.0
CMS1_k127_233152_4 Protein of unknown function (DUF502) - - - 0.000000000000000000000000000000000000000000000002162 174.0
CMS1_k127_2345854_0 nitrogen regulation protein NR(I) K07712 - - 2.483e-299 920.0
CMS1_k127_2345854_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004067 488.0
CMS1_k127_2345854_2 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K07708 - 2.7.13.3 0.000000000000000000000001269 102.0
CMS1_k127_2350580_0 Methyl-accepting chemotaxis protein K03406 - - 0.0 1114.0
CMS1_k127_2350580_1 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis K00560 - 2.1.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000518 572.0
CMS1_k127_2350580_2 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001651 501.0
CMS1_k127_2350580_3 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis K00287 - 1.5.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001207 302.0
CMS1_k127_2350851_0 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003294 544.0
CMS1_k127_2350851_1 ribonuclease BN K07058 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005036 520.0
CMS1_k127_2350851_2 Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system K02013 - 3.6.3.34 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000605 457.0
CMS1_k127_2350851_3 protein conserved in bacteria K09929 - - 0.000000000000000000000000000000000000000000000000000000000000000000000006729 244.0
CMS1_k127_2363791_0 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 - 2.3.1.234 3.046e-216 672.0
CMS1_k127_2363791_1 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 2.3.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001542 377.0
CMS1_k127_2363791_2 FliG C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003334 286.0
CMS1_k127_2363791_3 FliG C-terminal domain K02410 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000008377 259.0
CMS1_k127_2363791_4 Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin K01633 - 1.13.11.81,4.1.2.25,5.1.99.8 0.000000000000000000000000000000000000000000000000000000000003218 210.0
CMS1_k127_2363791_5 Putative S-adenosyl-L-methionine-dependent methyltransferase - - - 0.000000000000000000000000000000000000000000000002668 174.0
CMS1_k127_2368017_0 Catalyzes cross-linking of the peptidoglycan cell wall at the division septum K03587 - 3.4.16.4 0.0 1204.0
CMS1_k127_2368017_1 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 2.977e-248 768.0
CMS1_k127_2368017_2 acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002125 271.0
CMS1_k127_2368017_3 cell division K03586 GO:0000003,GO:0000910,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0007049,GO:0008150,GO:0009987,GO:0016020,GO:0016021,GO:0019954,GO:0022402,GO:0022414,GO:0031224,GO:0031226,GO:0032153,GO:0032505,GO:0043093,GO:0044425,GO:0044459,GO:0044464,GO:0051301,GO:0071944 - 0.000000000000000000000000000000000000004214 148.0
CMS1_k127_2436712_0 Helicase K03722 - 3.6.4.12 0.0 1173.0
CMS1_k127_2436712_1 YcaO cyclodehydratase, ATP-ad Mg2+-binding K09136 - - 1.244e-310 952.0
CMS1_k127_2436712_3 Glycoprotease family K14742 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001081 423.0
CMS1_k127_2436712_4 universal stress protein K06149 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001944 263.0
CMS1_k127_2444222_0 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 0.0 1220.0
CMS1_k127_2444222_1 dihydroorotase K01465 - 3.5.2.3 1.542e-254 785.0
CMS1_k127_2444222_2 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.00000000000000000000000000000000000000001296 155.0
CMS1_k127_2469507_0 signal-transduction protein containing cAMP-binding and CBS domains K07182 - - 0.0 1064.0
CMS1_k127_2469507_1 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K14393 - - 0.0 1021.0
CMS1_k127_2469507_2 Participates in both transcription termination and antitermination K02600 - - 7.655e-305 936.0
CMS1_k127_2469507_3 dna polymerase iii K02342 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001857 377.0
CMS1_k127_2469507_4 Required for maturation of 30S ribosomal subunits K09748 GO:0000028,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004391 293.0
CMS1_k127_2469507_5 Protein of unknown function, DUF485 - - - 0.0000000000000000000000000000000000000000000000000003749 185.0
CMS1_k127_2529591_0 phosphonate metabolism protein PhnM K06162 - 3.6.1.63 3.497e-237 735.0
CMS1_k127_2529591_1 Iron-containing alcohol dehydrogenase K08325 - - 7.33e-229 711.0
CMS1_k127_2529591_10 - - - - 0.00000007044 56.0
CMS1_k127_2529591_2 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001155 567.0
CMS1_k127_2529591_3 phosphonate C-P lyase system protein PhnK K05781 GO:0005575,GO:0006793,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0019634,GO:0019637,GO:0019700,GO:0032991,GO:0044237,GO:0046434,GO:0071704,GO:1901575,GO:1902494,GO:1904176 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007442 546.0
CMS1_k127_2529591_4 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001703 546.0
CMS1_k127_2529591_5 Carbon-phosphorus lyase complex accessory protein K06167 GO:0003674,GO:0003824,GO:0005488,GO:0006793,GO:0008081,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0016787,GO:0016788,GO:0019634,GO:0019637,GO:0019700,GO:0030145,GO:0042578,GO:0043167,GO:0043169,GO:0044237,GO:0046434,GO:0046872,GO:0046914,GO:0071704,GO:1901575 3.1.4.55 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000112 511.0
CMS1_k127_2529591_6 phosphonate C-P lyase system protein PhnL K05780 GO:0005575,GO:0006793,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0019634,GO:0019637,GO:0019700,GO:0032991,GO:0044237,GO:0046434,GO:0061694,GO:0061695,GO:0071704,GO:1901575,GO:1902494,GO:1990234 2.7.8.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006057 475.0
CMS1_k127_2529591_7 ThiJ PfpI family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001138 416.0
CMS1_k127_2529591_8 Nitroreductase family K10679 - 1.5.1.34 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001239 400.0
CMS1_k127_2529591_9 Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP) K05774 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006015,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019200,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019634,GO:0019637,GO:0019674,GO:0019693,GO:0033863,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044262,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046390,GO:0046391,GO:0046483,GO:0046496,GO:0046835,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.4.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003015 283.0
CMS1_k127_2530047_0 signal-transduction protein containing cAMP-binding and CBS domains K07238 - - 4.874e-245 765.0
CMS1_k127_2530047_1 Peptidogalycan biosysnthesis/recognition K09919 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003475 467.0
CMS1_k127_2549834_0 FAD linked oxidases, C-terminal domain - - - 0.0 1665.0
CMS1_k127_2549834_1 Maf-like protein K06287 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001385 350.0
CMS1_k127_2549834_2 bis(5'-adenosyl)-triphosphatase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000008685 256.0
CMS1_k127_2549834_3 Bacterial transferase hexapeptide (six repeats) - - - 0.000000000000000000000000001419 113.0
CMS1_k127_2549834_4 ribonuclease, Rne Rng family K08301 - - 0.00000000000000004385 80.0
CMS1_k127_2569529_0 His Kinase A (phosphoacceptor) domain - - - 0.0 1448.0
CMS1_k127_2569529_1 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease K02335,K02342,K03654,K03722,K10906 GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0004529,GO:0004536,GO:0005488,GO:0005515,GO:0006139,GO:0006259,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008309,GO:0008409,GO:0009987,GO:0016787,GO:0016788,GO:0016796,GO:0016895,GO:0034641,GO:0035312,GO:0042802,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0051908,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360 2.7.7.7,3.6.4.12 8.466e-222 689.0
CMS1_k127_2569529_2 Calcineurin-like phosphoesterase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002349 574.0
CMS1_k127_2569529_3 Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP K01496,K11755 - 3.5.4.19,3.6.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004506 282.0
CMS1_k127_2569529_4 ligase activity - - - 0.000000000000000000000000000000000000001655 147.0
CMS1_k127_259056_0 TIGRFAM DNA protecting protein DprA K04096 - - 1.277e-213 666.0
CMS1_k127_259056_1 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 - 2.1.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006293 579.0
CMS1_k127_259056_2 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA K03500 - 2.1.1.176 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007397 385.0
CMS1_k127_259056_3 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002174 333.0
CMS1_k127_259056_4 Response regulator receiver - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007194 329.0
CMS1_k127_2633312_0 Reutilizes the intact tripeptide L-alanyl-gamma-D- glutamyl-meso-diaminopimelate by linking it to UDP-N- acetylmuramate K02558 - 6.3.2.45 1.089e-272 842.0
CMS1_k127_2633312_1 Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides K03684 - 3.1.13.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001682 457.0
CMS1_k127_2633312_2 protein conserved in bacteria K09906 GO:0003674,GO:0003824,GO:0004497,GO:0005488,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016705,GO:0016709,GO:0017185,GO:0018126,GO:0018193,GO:0018205,GO:0019538,GO:0036211,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0043687,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0046872,GO:0055114,GO:0071704,GO:0072580,GO:1901260,GO:1901564 - 0.00000000000000000000000000000000000000000000000000000006366 196.0
CMS1_k127_265498_0 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006457,GO:0006810,GO:0008104,GO:0008150,GO:0008565,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0022607,GO:0031224,GO:0031226,GO:0032977,GO:0033036,GO:0034613,GO:0042886,GO:0043933,GO:0044085,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051205,GO:0051234,GO:0051259,GO:0051260,GO:0051641,GO:0061024,GO:0065003,GO:0070727,GO:0071702,GO:0071705,GO:0071840,GO:0071944,GO:0072657,GO:0090150 - 1.115e-240 754.0
CMS1_k127_265498_1 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 GO:0000166,GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006275,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010556,GO:0016020,GO:0017076,GO:0019219,GO:0019222,GO:0030554,GO:0031323,GO:0031326,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0035639,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050789,GO:0050794,GO:0051052,GO:0051171,GO:0060255,GO:0065007,GO:0071704,GO:0071944,GO:0080090,GO:0090304,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901363,GO:1901576,GO:1990837,GO:2000112 - 1.873e-233 729.0
CMS1_k127_265498_2 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 GO:0003674,GO:0003824,GO:0003887,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009360,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0022616,GO:0032991,GO:0033554,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0042575,GO:0042802,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0061695,GO:0071704,GO:0071897,GO:0090304,GO:0140097,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990234 2.7.7.7 2.251e-201 630.0
CMS1_k127_265498_3 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 GO:0000166,GO:0001510,GO:0001882,GO:0001883,GO:0002097,GO:0002098,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005515,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006457,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009268,GO:0009451,GO:0009628,GO:0009636,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019003,GO:0030488,GO:0030955,GO:0031420,GO:0032259,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034470,GO:0034641,GO:0034660,GO:0035639,GO:0036094,GO:0042221,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0050896,GO:0061077,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901363 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002436 579.0
CMS1_k127_265498_4 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP K03629 GO:0000731,GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009411,GO:0009416,GO:0009432,GO:0009605,GO:0009628,GO:0009987,GO:0009991,GO:0018130,GO:0019438,GO:0031668,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071496,GO:0071704,GO:0071897,GO:0090304,GO:0097159,GO:1901360,GO:1901362,GO:1901363,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003872 449.0
CMS1_k127_265498_5 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 GO:0000166,GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0003916,GO:0003918,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006265,GO:0006351,GO:0006725,GO:0006807,GO:0006996,GO:0007059,GO:0008094,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009295,GO:0009330,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016853,GO:0016887,GO:0017076,GO:0017111,GO:0018130,GO:0019438,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0032774,GO:0032991,GO:0034335,GO:0034641,GO:0034645,GO:0034654,GO:0035639,GO:0036094,GO:0042221,GO:0042493,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051276,GO:0061505,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0097367,GO:0097659,GO:0140097,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901576 5.99.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002444 385.0
CMS1_k127_265498_6 Belongs to the UPF0234 family K09767 GO:0000049,GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005524,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006974,GO:0008144,GO:0008150,GO:0009987,GO:0017076,GO:0019001,GO:0030554,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032559,GO:0032561,GO:0033554,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051716,GO:0097159,GO:0097367,GO:1901265,GO:1901363 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001993 273.0
CMS1_k127_265498_7 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 GO:0000966,GO:0001682,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004526,GO:0004540,GO:0004549,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005655,GO:0005730,GO:0006139,GO:0006396,GO:0006399,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0030677,GO:0030681,GO:0031974,GO:0031981,GO:0032991,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044452,GO:0044464,GO:0046483,GO:0070013,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0099116,GO:0140098,GO:0140101,GO:1901360,GO:1902494,GO:1902555,GO:1905348,GO:1990904 3.1.26.5 0.000000000000000000000000000000000000000000000000000004108 192.0
CMS1_k127_265498_8 Could be involved in insertion of integral membrane proteins into the membrane K08998 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008150,GO:0008565,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0031224,GO:0031226,GO:0032977,GO:0033036,GO:0034613,GO:0042886,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0061024,GO:0070727,GO:0071702,GO:0071705,GO:0071840,GO:0071944,GO:0072657,GO:0090150 - 0.0000000000000000000000000001055 116.0
CMS1_k127_265498_9 Belongs to the bacterial ribosomal protein bL34 family K02914 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000002596 81.0
CMS1_k127_2671150_0 Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins K02461 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 3.961e-197 620.0
CMS1_k127_2671150_2 Type II secretion system (T2SS), protein K K02460 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003233 273.0
CMS1_k127_2671150_3 Type II secretion system (T2SS), protein M K02462 - - 0.00000000000000000000000001274 115.0
CMS1_k127_2671150_4 General secretion pathway protein K02459 GO:0002790,GO:0006810,GO:0008104,GO:0008150,GO:0009306,GO:0009987,GO:0015031,GO:0015628,GO:0015833,GO:0032940,GO:0033036,GO:0042886,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0098776 - 0.000000000000008306 76.0
CMS1_k127_269166_0 Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation K11085 - - 3.253e-218 679.0
CMS1_k127_269166_1 Tyrosine phosphatase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001291 369.0
CMS1_k127_269166_2 membrane-associated metal-dependent hydrolase K19353 GO:0000271,GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0005975,GO:0005976,GO:0006629,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0009058,GO:0009059,GO:0009103,GO:0009244,GO:0009311,GO:0009312,GO:0009987,GO:0016020,GO:0016051,GO:0016740,GO:0016772,GO:0016776,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044464,GO:0046401,GO:0071704,GO:0071944,GO:1901135,GO:1901137,GO:1901576,GO:1903509 - 0.0000000000000000000000000000000000000000000000000000008362 199.0
CMS1_k127_2696901_0 Glutamine synthetase, catalytic domain K01915 - 6.3.1.2 3.339e-288 885.0
CMS1_k127_2696901_1 Creatinine amidohydrolase K01470 - 3.5.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003988 505.0
CMS1_k127_2696901_2 NMT1-like family K02051 - - 0.00000000000000000000000000517 109.0
CMS1_k127_2755028_0 PFAM Transglycosylase SLT domain K08309 - - 0.0 1192.0
CMS1_k127_2755028_1 PFAM Transglycosylase SLT domain K08307 - - 1.021e-314 970.0
CMS1_k127_2755028_2 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 - 6.1.1.16 5.797e-288 887.0
CMS1_k127_2755028_3 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid K01069 - 3.1.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004566 477.0
CMS1_k127_2755028_4 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03768 - 5.2.1.8 0.000000000000000000000000000000000000000000000008863 171.0
CMS1_k127_2755028_5 methyltransferase - - - 0.00000000000000000000000000000000004559 136.0
CMS1_k127_2772281_0 flagellar hook-associated protein K02396 - - 0.0 1087.0
CMS1_k127_2772281_1 Flagellar hook protein FlgE K02390 - - 2.206e-278 862.0
CMS1_k127_2772281_10 TIGRFAM flagellar basal-body rod protein FlgF K02391 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002875 464.0
CMS1_k127_2772281_11 Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation K02393 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001282 440.0
CMS1_k127_2772281_12 Spore coat polysaccharide biosynthesis protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000171 445.0
CMS1_k127_2772281_13 Required for flagellar hook formation. May act as a scaffolding protein K02389 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008177 410.0
CMS1_k127_2772281_14 Acylneuraminate cytidylyltransferase K00983 - 2.7.7.43 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000591 402.0
CMS1_k127_2772281_15 Rod binding protein K02395 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002167 299.0
CMS1_k127_2772281_16 Belongs to the flagella basal body rod proteins family K02388 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002943 256.0
CMS1_k127_2772281_17 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000006121 250.0
CMS1_k127_2772281_18 Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body K02387 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001418 243.0
CMS1_k127_2772281_2 curli production assembly transport component CsgG - - - 3.805e-263 813.0
CMS1_k127_2772281_3 DegT/DnrJ/EryC1/StrS aminotransferase family - - - 1.298e-237 736.0
CMS1_k127_2772281_4 Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation K02394 - - 2.811e-224 696.0
CMS1_k127_2772281_5 Polysaccharide biosynthesis protein K15894,K17716 - 4.2.1.115,5.1.3.2 8.561e-211 655.0
CMS1_k127_2772281_6 Murein-degrading enzyme. May play a role in recycling of muropeptides during cell elongation and or cell division K08306 - - 7.942e-195 614.0
CMS1_k127_2772281_7 Belongs to the bacterial flagellin family K02397 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002755 559.0
CMS1_k127_2772281_8 flagellar basal-body rod protein FlgG K02392 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003407 511.0
CMS1_k127_2772281_9 Chemotaxis protein K03415 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004853 475.0
CMS1_k127_2804726_0 Phosphoribosylformylglycinamidine cyclo-ligase K01933 - 6.3.3.1 2.14e-222 690.0
CMS1_k127_2804726_1 Domain of unknown function (DUF4395) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001728 471.0
CMS1_k127_2804726_3 Belongs to the dCTP deaminase family K01494 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006220,GO:0006244,GO:0006253,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008829,GO:0009056,GO:0009058,GO:0009117,GO:0009141,GO:0009143,GO:0009147,GO:0009149,GO:0009166,GO:0009200,GO:0009204,GO:0009211,GO:0009213,GO:0009219,GO:0009223,GO:0009262,GO:0009264,GO:0009314,GO:0009394,GO:0009628,GO:0009987,GO:0015949,GO:0016787,GO:0016810,GO:0016814,GO:0018130,GO:0019239,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046065,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0050896,GO:0055086,GO:0071704,GO:0072527,GO:0072529,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576 3.5.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002651 405.0
CMS1_k127_2804726_4 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003502 399.0
CMS1_k127_2804726_5 RF-1 domain K15034 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002011 241.0
CMS1_k127_2827065_0 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle K01595 - 4.1.1.31 0.0 1823.0
CMS1_k127_2827065_1 Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control K00970 - 2.7.7.19 6.171e-308 944.0
CMS1_k127_2827065_10 Phospholipid methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001754 249.0
CMS1_k127_2827065_2 Belongs to the class-I aminoacyl-tRNA synthetase family K01867 - 6.1.1.2 3.873e-218 677.0
CMS1_k127_2827065_3 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002231 483.0
CMS1_k127_2827065_4 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 - 6.3.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004429 477.0
CMS1_k127_2827065_5 D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1 K03841 - 3.1.3.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001225 414.0
CMS1_k127_2827065_6 amidohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001839 383.0
CMS1_k127_2827065_7 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions K01507 - 3.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006318 367.0
CMS1_k127_2827065_8 PFAM 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK K00950 - 2.7.6.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005499 275.0
CMS1_k127_2827065_9 Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine K01579 - 4.1.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000001518 258.0
CMS1_k127_2846750_0 FeS assembly protein SufB K09014 - - 0.0 999.0
CMS1_k127_2846750_1 Belongs to the MurCDEF family K01924 - 6.3.2.8 1.876e-284 876.0
CMS1_k127_2846750_10 - - - - 0.0000000000000000007393 86.0
CMS1_k127_2846750_2 FeS assembly protein SufD K09015 - - 7.808e-269 829.0
CMS1_k127_2846750_3 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 1.347e-260 805.0
CMS1_k127_2846750_4 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 2.55e-260 804.0
CMS1_k127_2846750_5 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K02535 - 3.5.1.108 3.035e-215 669.0
CMS1_k127_2846750_6 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001604 570.0
CMS1_k127_2846750_7 FeS assembly ATPase SufC K09013 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001009 498.0
CMS1_k127_2846750_8 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly K03589 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001354 413.0
CMS1_k127_2846750_9 Protein of unknown function (DUF721) - - - 0.0000000000000000001229 88.0
CMS1_k127_2850401_0 cell division protein K03466 - - 0.0 1472.0
CMS1_k127_2850401_1 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00283 - 1.4.4.2 1.962e-297 915.0
CMS1_k127_2850401_10 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001307 246.0
CMS1_k127_2850401_11 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.0000000000000000000000000000000000000000000000000000000000000000000007932 238.0
CMS1_k127_2850401_12 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000007003 194.0
CMS1_k127_2850401_14 Flagellar hook-length control protein FliK - - - 0.000002998 49.0
CMS1_k127_2850401_2 ATPase (AAA K07478 - - 2.603e-277 854.0
CMS1_k127_2850401_3 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 2.057e-224 700.0
CMS1_k127_2850401_4 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 2.387e-219 683.0
CMS1_k127_2850401_5 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 1.059e-218 681.0
CMS1_k127_2850401_6 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 1.737e-198 619.0
CMS1_k127_2850401_7 Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP K00575 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006464,GO:0006479,GO:0006807,GO:0006935,GO:0008022,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008213,GO:0008276,GO:0008757,GO:0008983,GO:0009605,GO:0009987,GO:0010340,GO:0016020,GO:0016740,GO:0016741,GO:0019538,GO:0032259,GO:0032991,GO:0036211,GO:0040011,GO:0042221,GO:0042330,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051998,GO:0071704,GO:0071944,GO:0098561,GO:0140096,GO:1901564 2.1.1.80 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005244 535.0
CMS1_k127_2850401_8 Peptidyl-prolyl cis-trans isomerase K03773 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002252 421.0
CMS1_k127_2850401_9 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) K03634 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008597 357.0
CMS1_k127_2876913_0 acetamidase formamidase K01455 - 3.5.1.49 3.98e-245 759.0
CMS1_k127_2876913_1 Also exhibits in vitro acyl transferase activity, transferring the acyl moiety of short-chain amides to hydroxylamine to form hydroxamates K01426 - 3.5.1.4 3.084e-223 692.0
CMS1_k127_2876913_10 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000006217 246.0
CMS1_k127_2876913_11 Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG K03189 - - 0.00000000000000000000000000000000000000000000000000000000000001007 216.0
CMS1_k127_2876913_12 Putative regulatory protein - - - 0.0000000000000000000000000000000000000002599 152.0
CMS1_k127_2876913_2 Periplasmic binding protein domain K01999,K11959 - - 5.476e-223 696.0
CMS1_k127_2876913_3 Branched-chain amino acid transport system / permease component K01998,K11961 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002762 561.0
CMS1_k127_2876913_4 Belongs to the binding-protein-dependent transport system permease family K11960 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001776 486.0
CMS1_k127_2876913_5 ABC transporter ATP-binding K11962 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007254 429.0
CMS1_k127_2876913_6 PFAM von Willebrand factor type A - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001781 428.0
CMS1_k127_2876913_7 ABC transporter ATP-binding protein K11963 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001531 348.0
CMS1_k127_2876913_8 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000481 296.0
CMS1_k127_2876913_9 Belongs to the NiCoT transporter (TC 2.A.52) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005394 283.0
CMS1_k127_2917951_0 Major Facilitator Superfamily K02575 - - 4.592e-303 931.0
CMS1_k127_2917951_1 Pyridine nucleotide-disulphide oxidoreductase K00362 - 1.7.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001376 507.0
CMS1_k127_2959491_0 Aminotransferase K00812 - 2.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006841 374.0
CMS1_k127_2959491_1 Exopolysaccharide biosynthesis protein YbjH - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007018 364.0
CMS1_k127_30269_0 Methyl-accepting chemotaxis protein (MCP) signaling domain K03406 - - 0.0 1231.0
CMS1_k127_30269_1 Responsible for synthesis of pseudouridine from uracil- 13 in transfer RNAs K06176 - 5.4.99.27 2.284e-227 707.0
CMS1_k127_30269_2 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001373 329.0
CMS1_k127_30269_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004073 298.0
CMS1_k127_3027945_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.0 1258.0
CMS1_k127_3027945_1 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002992 578.0
CMS1_k127_3027945_2 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009692 470.0
CMS1_k127_3046932_0 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 1.238e-288 892.0
CMS1_k127_3046932_1 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 2.826e-270 834.0
CMS1_k127_3046932_2 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 2.031e-224 696.0
CMS1_k127_3046932_3 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 1.256e-208 651.0
CMS1_k127_3046932_4 Peptidoglycan polymerase that is essential for cell division K03588 - - 2.283e-206 646.0
CMS1_k127_3046932_5 acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008266 285.0
CMS1_k127_3046932_6 chemotaxis, protein K03406 - - 0.00000000000000000000000000000000000000000000000000001674 190.0
CMS1_k127_3046932_7 KR domain K00034 - 1.1.1.47 0.00003134 48.0
CMS1_k127_3053593_0 DNA polymerase III alpha subunit K02337 - 2.7.7.7 0.0 2081.0
CMS1_k127_3053593_1 Belongs to the FAD-dependent oxidoreductase 2 family. FRD SDH subfamily K00239 - 1.3.5.1,1.3.5.4 0.0 1113.0
CMS1_k127_3053593_10 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.00000000000000000000000000000000000000000000000000000000000000000000003269 241.0
CMS1_k127_3053593_11 Succinate dehydrogenase hydrophobic membrane anchor K00242 - - 0.00000000000000000000000000000000000000000000000000000000000001668 217.0
CMS1_k127_3053593_13 succinate dehydrogenase K00241 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000003077 207.0
CMS1_k127_3053593_15 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.0000000000000000000000000000000000000004828 149.0
CMS1_k127_3053593_2 Belongs to the methyltransferase superfamily K06969 - 2.1.1.191 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001594 529.0
CMS1_k127_3053593_3 Sodium Bile acid symporter family K03453 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008202 518.0
CMS1_k127_3053593_4 Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine K00684 - 2.3.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002292 500.0
CMS1_k127_3053593_5 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 - 2.6.99.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005873 493.0
CMS1_k127_3053593_6 Involved in DNA repair and RecF pathway recombination K03584 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008454 471.0
CMS1_k127_3053593_7 Succinate dehydrogenase fumarate reductase K00240 - 1.3.5.1,1.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006554 460.0
CMS1_k127_3053593_8 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001081 426.0
CMS1_k127_3053593_9 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002857 426.0
CMS1_k127_3069586_0 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00836 - 2.6.1.76 2.655e-266 821.0
CMS1_k127_3069586_1 L-2,4-diaminobutyric acid acetyltransferase K06718 - 2.3.1.178 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001226 364.0
CMS1_k127_3069586_2 Catalyzes the circularization of gamma-N-acetyl- alpha,gamma-diaminobutyric acid (ADABA) to ectoine (1,4,5,6- tetrahydro-2-methyl-4-pyrimidine carboxylic acid), which is an excellent osmoprotectant K06720 - 4.2.1.108 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006584 269.0
CMS1_k127_3069586_3 Low affinity iron permease - - - 0.000000000000000000000000000000000000000000000000000000000000000001327 228.0
CMS1_k127_3069586_4 DnaJ molecular chaperone homology domain K05801 - - 0.00000000000000000000000002725 108.0
CMS1_k127_3114099_0 Phosphonate ABC transporter K02042 - - 3.065e-211 657.0
CMS1_k127_3114099_1 ABC transporter, phosphonate, periplasmic substrate-binding protein K02044 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008451 575.0
CMS1_k127_3114099_2 ABC transporter K02041 - 3.6.3.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003115 518.0
CMS1_k127_3114099_3 UTRA K02043 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003564 441.0
CMS1_k127_3114099_4 PFAM phosphonate metabolism K06165 - 2.7.8.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006515 404.0
CMS1_k127_3114099_5 Phosphonate K06164 GO:0003674,GO:0003824,GO:0005575,GO:0006793,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0016740,GO:0016772,GO:0016780,GO:0019634,GO:0019637,GO:0019700,GO:0032991,GO:0044237,GO:0046434,GO:0061693,GO:0061694,GO:0061695,GO:0071704,GO:1901575,GO:1902494,GO:1904176,GO:1990234 2.7.8.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001037 332.0
CMS1_k127_3114099_6 Phosphonate metabolism protein PhnG K06166 - 2.7.8.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003493 278.0
CMS1_k127_3114099_7 Isoprenylcysteine carboxyl methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001691 250.0
CMS1_k127_3126926_0 PFAM integrase K07497 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002225 396.0
CMS1_k127_3126926_1 COG2963 Transposase and inactivated derivatives K07483 - - 0.00000000000000000000000000000001965 128.0
CMS1_k127_3139320_0 Peptidase family M48 K03799 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001005 567.0
CMS1_k127_3139320_1 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001143 323.0
CMS1_k127_3139320_2 - - - - 0.000000000000000000000000059 113.0
CMS1_k127_3140883_0 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 1.162e-293 911.0
CMS1_k127_3162669_0 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 - - 0.0 1217.0
CMS1_k127_3162669_1 Belongs to the ParB family K03497 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002371 516.0
CMS1_k127_3162669_2 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009678 505.0
CMS1_k127_3162669_3 PFAM CobQ CobB MinD ParA nucleotide binding domain K03496 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002004 480.0
CMS1_k127_3162669_4 Specifically methylates the N7 position of guanine in position 527 of 16S rRNA K03501 - 2.1.1.170 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004592 384.0
CMS1_k127_3162669_5 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005937 265.0
CMS1_k127_3162669_6 ATP synthase I chain K02116 - - 0.000000000000000000000000000000000000000000000000000000000000002115 218.0
CMS1_k127_3162669_7 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 - - 0.000000000000000000000000000000000000000000000000006769 181.0
CMS1_k127_3162669_8 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.0000000000000000000000000000000000000000000003309 168.0
CMS1_k127_3162669_9 Putative diguanylate phosphodiesterase - - - 0.0000000000000000000002218 98.0
CMS1_k127_3165083_0 Putative diguanylate phosphodiesterase - - - 3.016e-285 917.0
CMS1_k127_3165083_1 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) K06879,K09457 - 1.7.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001402 505.0
CMS1_k127_3165083_2 Bacterial-like globin K06886 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001322 252.0
CMS1_k127_3170325_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1699.0
CMS1_k127_3170325_1 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.0 1304.0
CMS1_k127_3170325_2 Specifically methylates the 50S ribosomal protein L3 on a specific glutamine residue K07320 - 2.1.1.298 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006772 603.0
CMS1_k127_3170325_3 Eukaryotic-type carbonic anhydrase K01674 - 4.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005625 541.0
CMS1_k127_3170325_4 TIGRFAM molybdenum cofactor synthesis K03831 - 2.7.7.75 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005749 371.0
CMS1_k127_3170325_5 SIR2-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004422 315.0
CMS1_k127_3181261_0 Glutaminyl-tRNA synthetase K01886 - 6.1.1.18 0.0 1133.0
CMS1_k127_3181261_1 Belongs to the DEAD box helicase family K05591 - 3.6.4.13 2.259e-300 923.0
CMS1_k127_3181261_2 Protein of unknown function (DUF3010) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009815 302.0
CMS1_k127_3181261_3 Redoxin K03564 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001267 294.0
CMS1_k127_3181261_4 CHASE - - - 0.00000000000000000000000000000000000000000000000000000000121 205.0
CMS1_k127_3196898_0 Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation K02232 - 6.3.5.10 6.523e-220 691.0
CMS1_k127_3196898_1 TonB-dependent Receptor Plug K16092 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008947 515.0
CMS1_k127_3196898_2 Leucine-rich repeat (LRR) protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007217 494.0
CMS1_k127_3196898_3 Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Binds vitamin B12 and delivers it to the periplasmic surface of BtuC K02016,K06858 GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0006810,GO:0008144,GO:0008150,GO:0015889,GO:0015893,GO:0019842,GO:0030288,GO:0030313,GO:0031419,GO:0031975,GO:0036094,GO:0042221,GO:0042493,GO:0042597,GO:0044464,GO:0046906,GO:0048037,GO:0050896,GO:0051179,GO:0051180,GO:0051181,GO:0051234,GO:0071702,GO:0071705,GO:0097159,GO:1901363 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001947 440.0
CMS1_k127_3196898_4 Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids K19221 - 2.5.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001832 330.0
CMS1_k127_3196898_5 Pentapeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000015 252.0
CMS1_k127_3196898_6 - - - - 0.000000000000000000000000002816 111.0
CMS1_k127_3196898_7 Leucine-rich repeat (LRR) protein - - - 0.00000000000002752 74.0
CMS1_k127_3196898_8 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.000000000000548 68.0
CMS1_k127_3211840_0 Putative diguanylate phosphodiesterase - - - 0.0 1075.0
CMS1_k127_3211840_1 Putative diguanylate phosphodiesterase - - - 1.5e-323 1008.0
CMS1_k127_3211840_10 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003974 462.0
CMS1_k127_3211840_11 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003198 427.0
CMS1_k127_3211840_12 organic phosphonate transport K02044 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004014 379.0
CMS1_k127_3211840_13 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002224 313.0
CMS1_k127_3211840_14 VanZ like family - - - 0.000007772 53.0
CMS1_k127_3211840_2 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 2.797e-292 900.0
CMS1_k127_3211840_3 glutamate--cysteine ligase K01919 - 6.3.2.2 2.178e-282 869.0
CMS1_k127_3211840_4 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 - 2.5.1.6 3.344e-249 770.0
CMS1_k127_3211840_5 Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR) K01589 - 6.3.4.18 3.216e-233 723.0
CMS1_k127_3211840_6 protein involved in response to NO K07234 - - 6.422e-196 617.0
CMS1_k127_3211840_7 Belongs to the prokaryotic GSH synthase family K01920 - 6.3.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000264 607.0
CMS1_k127_3211840_8 TIGRFAM 5,10-methylenetetrahydrofolate reductase K00297 - 1.5.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001904 562.0
CMS1_k127_3211840_9 Putative S-adenosyl-L-methionine-dependent methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005646 553.0
CMS1_k127_321527_0 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 1.295e-267 825.0
CMS1_k127_321527_1 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 - 4.1.1.37 6.983e-233 721.0
CMS1_k127_321527_2 TIGRFAM A G-specific adenine glycosylase K03575 - - 6.44e-215 669.0
CMS1_k127_321527_3 Staphylococcal nuclease homologue - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004007 492.0
CMS1_k127_321527_4 rRNA binding K02909 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006950,GO:0007154,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009267,GO:0009605,GO:0009987,GO:0009991,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0031667,GO:0031668,GO:0031669,GO:0032991,GO:0033554,GO:0034224,GO:0034641,GO:0034645,GO:0042594,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0050896,GO:0051716,GO:0071496,GO:0071704,GO:0120127,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000006104 166.0
CMS1_k127_321527_5 Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006979,GO:0008150,GO:0009987,GO:0033554,GO:0034599,GO:0042221,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051716,GO:0070887 - 0.00000000000000000000000000000000000000000001029 163.0
CMS1_k127_321527_6 Belongs to the thioredoxin family K03671 GO:0003674,GO:0003824,GO:0004791,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009636,GO:0009987,GO:0015035,GO:0015036,GO:0016209,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0016671,GO:0019725,GO:0033554,GO:0034599,GO:0042221,GO:0042592,GO:0044424,GO:0044444,GO:0044464,GO:0045454,GO:0047134,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1990748 - 0.0000000000000000000000000000000001522 132.0
CMS1_k127_3240662_0 Diguanylate cyclase - - - 1.507e-234 742.0
CMS1_k127_3240662_1 Catalyzes the transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA K06917 - - 4.9e-234 726.0
CMS1_k127_3240662_10 Redoxin K03564 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004808 301.0
CMS1_k127_3240662_11 Antibiotic biosynthesis monooxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000002739 224.0
CMS1_k127_3240662_2 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 6.149e-225 699.0
CMS1_k127_3240662_3 Murein-degrading enzyme. May play a role in recycling of muropeptides during cell elongation and or cell division K08306 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008887 597.0
CMS1_k127_3240662_4 DNA RNA non-specific endonuclease K01173 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007361 478.0
CMS1_k127_3240662_5 Glucose-regulated metallo-peptidase M90 K09933 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002764 452.0
CMS1_k127_3240662_6 signal transduction protein containing a membrane domain an EAL and a GGDEF domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001304 459.0
CMS1_k127_3240662_7 Cation efflux family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001193 380.0
CMS1_k127_3240662_8 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components K02051 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002172 342.0
CMS1_k127_3240662_9 VIT family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003283 312.0
CMS1_k127_3263483_0 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962 - 2.1.3.15,6.4.1.2 5.42e-197 616.0
CMS1_k127_3263483_1 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001483 440.0
CMS1_k127_3263483_2 - K07283 - - 0.000000000000000000000000000000000000000000001665 167.0
CMS1_k127_3279331_0 His Kinase A (phosphoacceptor) domain - - - 4.563e-232 723.0
CMS1_k127_3279331_1 Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme K02302 - 1.3.1.76,2.1.1.107,4.99.1.4 5.311e-205 639.0
CMS1_k127_3279331_2 Outer membrane efflux protein - - - 9.439e-202 637.0
CMS1_k127_3279331_3 Glycosyl transferase - GO:0003674,GO:0003676,GO:0003677,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464,GO:0097159,GO:1901363 - 1.684e-201 629.0
CMS1_k127_3279331_4 Transcriptional regulatory protein, C terminal K02483 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003167 409.0
CMS1_k127_3279331_5 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001715 375.0
CMS1_k127_3279331_6 Barrel-sandwich domain of CusB or HlyD membrane-fusion - - - 0.00000000000004392 76.0
CMS1_k127_331388_0 Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell K00982 - 2.7.7.42,2.7.7.89 0.0 1673.0
CMS1_k127_331388_1 TIGRFAM glutamine synthetase, type I K01915 - 6.3.1.2 2.749e-304 933.0
CMS1_k127_331388_2 Ammonium Transporter K03320 - - 1.179e-250 775.0
CMS1_k127_331388_3 PFAM Binding-protein-dependent transport system inner membrane component K02037 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000236 593.0
CMS1_k127_331388_4 tRNA (guanine-N7-)-methyltransferase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003147 454.0
CMS1_k127_331388_5 Bacterial flagellin C-terminal helical region K02406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000216 408.0
CMS1_k127_331388_7 Controls the rotational direction of flagella during chemotaxis K02415 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005815 254.0
CMS1_k127_331388_8 nitrogen regulatory protein P-II K04752 - - 0.00000000000000000000000000000000000000000000000000000000000000008388 222.0
CMS1_k127_331388_9 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 0.0000000000000000000000002881 104.0
CMS1_k127_3335198_0 TIGRFAM Acetolactate synthase, large subunit, biosynthetic K01652 - 2.2.1.6 0.0 1129.0
CMS1_k127_3335198_1 TIGRFAM Acetolactate synthase, small subunit K01653 - 2.2.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009777 317.0
CMS1_k127_3335198_2 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 0.000000000000000000000000000000000001855 139.0
CMS1_k127_3347587_0 Diguanylate cyclase - - - 0.0 1096.0
CMS1_k127_3347587_1 COG0226 ABC-type phosphate transport system, periplasmic component K02040 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004714 396.0
CMS1_k127_3385084_0 phosphoglucomutase phosphomannomutase alpha beta alpha domain III K01835 - 5.4.2.2 0.0 1028.0
CMS1_k127_3385084_1 Patatin-like phospholipase K07001 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002652 532.0
CMS1_k127_3385084_2 Elongation factor P (EF-P) OB domain K02356 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001437 361.0
CMS1_k127_3385084_3 (GGDEF) domain K20966 GO:0007154,GO:0007165,GO:0008150,GO:0009987,GO:0023052,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007 3.1.4.52 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000221 362.0
CMS1_k127_3385084_4 Outer membrane protein beta-barrel family K02014 - - 0.000000000000000000000000000000000000000001417 158.0
CMS1_k127_3388215_0 PD-(D/E)XK nuclease superfamily - - - 2.043e-239 743.0
CMS1_k127_3388215_1 Pseudouridine synthase K06177 - 5.4.99.28,5.4.99.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002499 549.0
CMS1_k127_3388215_2 Protein of unknown function DUF45 K07043 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000104 481.0
CMS1_k127_3388215_3 Exonuclease K02342 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002782 392.0
CMS1_k127_3413400_0 ABC transporter K15738 - - 0.0 1249.0
CMS1_k127_3413400_1 chemotaxis, protein K03406,K03776 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0006935,GO:0007154,GO:0007165,GO:0008150,GO:0009453,GO:0009454,GO:0009605,GO:0009987,GO:0016020,GO:0023052,GO:0040011,GO:0042221,GO:0042330,GO:0042802,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0050918,GO:0051716,GO:0052128,GO:0052131,GO:0065007,GO:0071944 - 0.0 1215.0
CMS1_k127_3413400_11 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001047 252.0
CMS1_k127_3413400_12 Mitomycin resistance protein - - - 0.00000000000000000000000000000000000000000000007546 169.0
CMS1_k127_3413400_13 HDOD domain - - - 0.000000000000000000000000000000000000000002679 165.0
CMS1_k127_3413400_14 Protein of unknown function (DUF3892) - - - 0.000000000000000000000000000000002257 132.0
CMS1_k127_3413400_16 - - - - 0.000000000000000000001603 97.0
CMS1_k127_3413400_2 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides K00526,K03676 - 1.17.4.1 1.183e-237 736.0
CMS1_k127_3413400_3 Inositol monophosphatase family K01082 - 3.1.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008478 528.0
CMS1_k127_3413400_4 Haloacid dehalogenase-like hydrolase K20881 - 3.1.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002066 434.0
CMS1_k127_3413400_5 NADPH quinone reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009326 416.0
CMS1_k127_3413400_6 Spermidine synthase K00797 - 2.5.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004938 380.0
CMS1_k127_3413400_7 NUDIX domain K08312 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003894 339.0
CMS1_k127_3413400_8 Redoxin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007861 339.0
CMS1_k127_3413400_9 Belongs to the class I-like SAM-binding methyltransferase superfamily. TPMT family K00569 - 2.1.1.67 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001201 296.0
CMS1_k127_3504170_0 COG2931, RTX toxins and related Ca2 -binding proteins K12549 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006334 457.0
CMS1_k127_3504170_1 Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009125 411.0
CMS1_k127_3504170_2 Thioredoxin K03672 - 1.8.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004538 287.0
CMS1_k127_3504170_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004458 274.0
CMS1_k127_3505774_0 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02621 - - 0.0 1428.0
CMS1_k127_3505774_1 Belongs to the UPF0061 (SELO) family K08997 - - 4.458e-306 939.0
CMS1_k127_3505774_11 mercury ion transmembrane transporter activity K07213 - - 0.0000000000000000000000000006112 116.0
CMS1_k127_3505774_2 Tetratricopeptide repeat - - - 1.32e-304 942.0
CMS1_k127_3505774_3 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 2.438e-259 802.0
CMS1_k127_3505774_4 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 2.335e-224 696.0
CMS1_k127_3505774_5 With MotB forms the ion channels that couple flagellar rotation to proton sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine K02556 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002848 544.0
CMS1_k127_3505774_6 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002154 521.0
CMS1_k127_3505774_7 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 - 2.1.1.297 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000367 518.0
CMS1_k127_3505774_8 PFAM MoeZ MoeB domain K21029 - 2.7.7.80 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001089 481.0
CMS1_k127_3505774_9 Membrane MotB of proton-channel complex MotA/MotB K02557 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001974 418.0
CMS1_k127_3510945_0 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 - 6.5.1.2 0.0 1234.0
CMS1_k127_3510945_1 Carbohydrate kinase, FGGY K00854 - 2.7.1.17 3.458e-246 768.0
CMS1_k127_3510945_10 probably involved in intracellular septation K06190 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001463 389.0
CMS1_k127_3510945_11 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001196 342.0
CMS1_k127_3510945_12 Peptidase S24-like K01356 - 3.4.21.88 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004744 302.0
CMS1_k127_3510945_13 Asparaginase, N-terminal K01424 - 3.5.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002631 288.0
CMS1_k127_3510945_14 Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters. Also required for regulation of fis expression K06204 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002732 272.0
CMS1_k127_3510945_15 M61 glycyl aminopeptidase - - - 0.00000000000000000000000000000000000000000000000000000008114 196.0
CMS1_k127_3510945_16 type III effector - - - 0.000000000000000000000000000000000000000000000000000005251 192.0
CMS1_k127_3510945_17 PFAM YCII-related K09780 - - 0.00000000000000000000000000000000000000000000000000002909 188.0
CMS1_k127_3510945_18 Belongs to the SlyX family K03745 - - 0.000000000000000000000000000000000001139 139.0
CMS1_k127_3510945_19 Belongs to the UPF0307 family K09889 - - 0.000000000000000000000001007 110.0
CMS1_k127_3510945_2 AAA domain K07028 - - 5.735e-205 641.0
CMS1_k127_3510945_3 Belongs to the pseudouridine synthase RsuA family K06178 - 5.4.99.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004385 604.0
CMS1_k127_3510945_4 DNA polymerase alpha chain like domain K07053 - 3.1.3.97 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006524 567.0
CMS1_k127_3510945_5 Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins K03528 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005828 538.0
CMS1_k127_3510945_6 of the drug metabolite transporter (DMT) superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005716 534.0
CMS1_k127_3510945_7 PFAM Haloacid dehalogenase-like hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009525 479.0
CMS1_k127_3510945_8 Belongs to the SUA5 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000115 415.0
CMS1_k127_3510945_9 Peptidase M50 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001084 413.0
CMS1_k127_3522120_0 ATP-dependent Clp protease ATP-binding subunit ClpA K03694 - - 0.0 1417.0
CMS1_k127_3522120_1 COG0577 ABC-type antimicrobial peptide transport system permease component K02004 - - 0.0 1286.0
CMS1_k127_3522120_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005,K13888 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001613 581.0
CMS1_k127_3522120_3 Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions K21071 - 2.7.1.11,2.7.1.90 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001147 569.0
CMS1_k127_3522120_4 heat shock protein binding K03686 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003969 486.0
CMS1_k127_3522120_5 (ABC) transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002142 410.0
CMS1_k127_3522120_6 PhnA Zinc-Ribbon K06193 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003573 352.0
CMS1_k127_3522120_7 Protein required for attachment to host cells - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002199 269.0
CMS1_k127_3522120_8 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation K06891 - - 0.0000000000000000000000000000000000000000000000000000000000000002827 220.0
CMS1_k127_3532600_0 Putative diguanylate phosphodiesterase - - - 0.0 1573.0
CMS1_k127_3532600_1 Diguanylate cyclase - - - 1.655e-291 899.0
CMS1_k127_3532600_2 Acyl-transferase K00655 - 2.3.1.51 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006999 396.0
CMS1_k127_3532600_3 Flavodoxin-like fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009342 284.0
CMS1_k127_3532600_4 peptidyl-prolyl cis-trans isomerase activity K03769 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000001927 189.0
CMS1_k127_3532600_6 PPIC-type PPIASE domain K03769 - 5.2.1.8 0.000000000000000000000000000000000000000009773 153.0
CMS1_k127_3533804_0 Belongs to the GppA Ppx family K01524 - 3.6.1.11,3.6.1.40 5.818e-313 960.0
CMS1_k127_3533804_1 Oxidoreductase NAD-binding domain K00380 - 1.8.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002649 469.0
CMS1_k127_3533804_2 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004008 347.0
CMS1_k127_3536282_0 Belongs to the sodium neurotransmitter symporter (SNF) (TC 2.A.22) family K03308 - - 6.647e-267 827.0
CMS1_k127_3536282_1 Cell wall formation K00075 - 1.3.1.98 9.357e-220 682.0
CMS1_k127_3536282_2 Cyclic nucleotide-monophosphate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002094 304.0
CMS1_k127_3547742_0 chemotaxis, protein K03406 - - 1.326e-318 981.0
CMS1_k127_3547742_1 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 3.408e-249 771.0
CMS1_k127_3547742_2 MotA/TolQ/ExbB proton channel family K02556 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003193 495.0
CMS1_k127_3547742_3 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02622 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003821 455.0
CMS1_k127_3547742_4 Acyltransferase K00655 - 2.3.1.51 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006369 452.0
CMS1_k127_3547742_5 OmpA family K02557 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001261 444.0
CMS1_k127_3547742_6 Catalyzes the oxidation of either pyridoxine 5'- phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP) K00275 - 1.4.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003862 422.0
CMS1_k127_3547742_7 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine K03648 - 3.2.2.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009746 420.0
CMS1_k127_3547742_8 Membrane MotB of proton-channel complex MotA/MotB K02557 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001777 372.0
CMS1_k127_3547742_9 D,D-heptose 1,7-bisphosphate phosphatase K03273 - 3.1.3.82,3.1.3.83 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002066 329.0
CMS1_k127_3549519_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 0.0 1319.0
CMS1_k127_3549519_1 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 5.276e-301 924.0
CMS1_k127_3549519_2 M61 glycyl aminopeptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001682 438.0
CMS1_k127_3549519_3 Voltage-dependent anion channel - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008854 419.0
CMS1_k127_3549519_4 C4-dicarboxylate transporter malic acid transport protein K03304 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001017 298.0
CMS1_k127_3549519_6 - - - - 0.0000000003071 61.0
CMS1_k127_3549519_7 - - - - 0.000000005986 59.0
CMS1_k127_3550500_0 LysR substrate binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003047 557.0
CMS1_k127_3550500_1 Belongs to the pirin family K06911 - - 0.0000000000000000000000000000000000000000000000000000000000000002447 220.0
CMS1_k127_3550500_2 SURF4 family - - - 0.00000000000000000000000000000000000000000000005427 172.0
CMS1_k127_3550500_3 Domain of unknown function (DUF3817) - - - 0.0000000000000000000000000000000000000000001599 160.0
CMS1_k127_3550500_4 Binds directly to 16S ribosomal RNA K02968 - - 0.00000000000000000000000000000000008057 134.0
CMS1_k127_3550500_5 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.000000000000000000008725 91.0
CMS1_k127_3556611_0 beta-lactamase activity K07126,K13582 - - 2.768e-269 831.0
CMS1_k127_3556611_1 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis K00759 - 2.4.2.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009875 340.0
CMS1_k127_3556611_3 domain protein - - - 0.00000000000000123 89.0
CMS1_k127_3559568_0 Cytochrome c-type biogenesis protein Ccs1 ResB K07399 - - 0.0 1267.0
CMS1_k127_3559568_1 PFAM Cytochrome c assembly protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001594 525.0
CMS1_k127_3559568_2 Necessary for normal cell division and for the maintenance of normal septation K03978 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003586 449.0
CMS1_k127_36089_0 Multicopper oxidase - - - 3.56e-322 992.0
CMS1_k127_36089_1 DNA photolyase K01669 - 4.1.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001216 607.0
CMS1_k127_36089_2 HupE / UreJ protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001287 496.0
CMS1_k127_36089_4 - - - - 0.000000000000000000000000000000000000000000000000000000001455 201.0
CMS1_k127_3627518_0 Histidine kinase - - - 0.0 1367.0
CMS1_k127_3627518_1 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA K03500 - 2.1.1.176 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001888 492.0
CMS1_k127_3627518_2 response regulator receiver - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003963 484.0
CMS1_k127_3627518_3 Domain of unknown function (DUF4390) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000699 324.0
CMS1_k127_3644190_0 ABC transporter K06158 - - 1.026e-194 608.0
CMS1_k127_3644190_1 Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner K09810 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002477 322.0
CMS1_k127_365625_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 0.0 1058.0
CMS1_k127_365625_1 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 4.26e-268 827.0
CMS1_k127_365625_10 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic K05589 - - 0.00000000000000000000000000000000000000000007247 162.0
CMS1_k127_365625_2 3-deoxy-D-manno-octulosonic acid 8-phosphate synthase K01627 - 2.5.1.55 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001131 557.0
CMS1_k127_365625_3 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001089 504.0
CMS1_k127_365625_4 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001852 460.0
CMS1_k127_365625_5 Peptidase family M23 K06194 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005716 402.0
CMS1_k127_365625_6 Smr protein MutS2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000839 327.0
CMS1_k127_365625_7 SNARE associated Golgi protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001436 327.0
CMS1_k127_365625_8 Protein of unknown function (DUF498/DUF598) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002136 250.0
CMS1_k127_365625_9 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.0000000000000000000000000000000000000000000000001691 179.0
CMS1_k127_3677789_0 Glutamate synthase K00265 - 1.4.1.13,1.4.1.14 0.0 1852.0
CMS1_k127_3677789_1 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 0.0 1028.0
CMS1_k127_3677789_2 Glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 6.026e-201 629.0
CMS1_k127_3677789_3 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol K06131 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001708 560.0
CMS1_k127_3677789_4 Endonuclease Exonuclease phosphatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006803 328.0
CMS1_k127_3677789_5 One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA K03071 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007768 296.0
CMS1_k127_3677789_6 PFAM Rhodanese-like K01011 - 2.8.1.1,2.8.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005154 267.0
CMS1_k127_3677789_7 Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide K03216 - 2.1.1.207 0.000000000000000000000000000000000001695 138.0
CMS1_k127_3677789_8 Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins K03676 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0015035,GO:0015036,GO:0016491,GO:0016667,GO:0033218,GO:0042277,GO:0043167,GO:0043168,GO:0043295,GO:0044424,GO:0044444,GO:0044464,GO:0048037,GO:0055114,GO:0072341,GO:1900750,GO:1901681 - 0.000000000000000000000000000000002564 131.0
CMS1_k127_3711211_0 Alpha amylase, catalytic domain K00690 - 2.4.1.7 0.0 1133.0
CMS1_k127_3711211_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 1.5e-322 989.0
CMS1_k127_3711211_10 COG1030 Membrane-bound serine protease (ClpP class) K07403 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004144 461.0
CMS1_k127_3711211_11 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001215 315.0
CMS1_k127_3711211_12 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016469,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0032991,GO:0033178,GO:0034220,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0045259,GO:0045261,GO:0046034,GO:0046390,GO:0046483,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001063 269.0
CMS1_k127_3711211_13 Fe-S-cluster oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000001309 189.0
CMS1_k127_3711211_14 - K06910 - - 0.0000000000000000000000000000000000000000131 155.0
CMS1_k127_3711211_15 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.0000000000000001206 79.0
CMS1_k127_3711211_2 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 1.653e-290 894.0
CMS1_k127_3711211_3 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042 - 2.3.1.157,2.7.7.23 3.021e-267 826.0
CMS1_k127_3711211_4 COG0463 Glycosyltransferases involved in cell wall biogenesis K13693 - 2.4.1.266 1.208e-253 784.0
CMS1_k127_3711211_5 - - - - 6.503e-207 649.0
CMS1_k127_3711211_6 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 1.583e-200 630.0
CMS1_k127_3711211_7 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008996 549.0
CMS1_k127_3711211_8 Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate K03179 - 2.5.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000401 527.0
CMS1_k127_3711211_9 HAD-superfamily hydrolase, subfamily IIB K07026,K15918 - 2.7.1.31,3.1.3.70 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001159 482.0
CMS1_k127_3758740_0 Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of tRNA(Met), by using acetyl-CoA as an acetyl donor and ATP (or GTP) K06957 - 2.3.1.193 0.0 1329.0
CMS1_k127_3758740_1 Putative diguanylate phosphodiesterase - - - 0.0 1249.0
CMS1_k127_3758740_2 Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34 K15461 - 2.1.1.61 4.883e-283 873.0
CMS1_k127_3758740_3 Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4) K01433 - 3.5.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007207 549.0
CMS1_k127_3758740_4 Rhodanese Homology Domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006128 524.0
CMS1_k127_3770494_0 Pyridine nucleotide-disulphide oxidoreductase K17218 - 1.8.5.4 1.029e-227 707.0
CMS1_k127_3770494_1 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003362 527.0
CMS1_k127_3770494_2 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length K04760 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004368 321.0
CMS1_k127_3770494_4 PFAM GDSL-like Lipase Acylhydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000002769 225.0
CMS1_k127_3770494_5 Thioredoxin - - - 0.00000000000000000000000000000000000000000000000000000004197 197.0
CMS1_k127_3777992_0 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). - - - 0.0 1409.0
CMS1_k127_3777992_1 Belongs to the cysteine synthase cystathionine beta- synthase family K12339 - 2.5.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003246 370.0
CMS1_k127_3777992_2 PFAM UbiA prenyltransferase K02548 - 2.5.1.74 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002972 310.0
CMS1_k127_3786149_0 General secretion pathway protein K02459 GO:0002790,GO:0006810,GO:0008104,GO:0008150,GO:0009306,GO:0009987,GO:0015031,GO:0015628,GO:0015833,GO:0032940,GO:0033036,GO:0042886,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0098776 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003852 371.0
CMS1_k127_3786149_1 cell adhesion K02650 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001107 257.0
CMS1_k127_3786149_2 Prokaryotic N-terminal methylation motif K02456,K02458,K02655,K12285 - - 0.00000000000000000000000000000000000000000000000000000001185 199.0
CMS1_k127_3786149_3 Type II secretion system (T2SS), protein G K02456 - - 0.000000000000000000000000000000001329 129.0
CMS1_k127_3799627_0 Belongs to the IlvD Edd family K01687 - 4.2.1.9 0.0 1227.0
CMS1_k127_3799627_1 Asparagine synthase, glutamine-hydrolyzing K01953 - 6.3.5.4 0.0 1217.0
CMS1_k127_3799627_2 Belongs to the acetyltransferase family. ArgA subfamily K14682 - 2.3.1.1 3.914e-256 793.0
CMS1_k127_3799627_3 C-type monoheme cytochrome, which is part of the SoxAX cytochrome complex involved in sulfur oxidation. The SoxAX complex catalyzes the formation of a heterodisulfide bond between the conserved cysteine residue on a sulfur carrier SoxYZ complex subunit SoxY and thiosulfate or other inorganic sulfur substrates. This leads to the intermediary formation of conspicuous sulfur globules inside of the cells K17222 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005557 535.0
CMS1_k127_3799627_4 Trims short 3' overhangs of a variety of RNA species, leaving a one or two nucleotide 3' overhang. Responsible for the end-turnover of tRNA specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A). Also appears to be involved in tRNA biosynthesis K03683 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006628 421.0
CMS1_k127_3799627_5 Sulfur oxidation protein SoxY K17226 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002158 275.0
CMS1_k127_3799627_6 PFAM Mo-dependent nitrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004779 258.0
CMS1_k127_3799627_7 Cytochrome c K17223 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000258 243.0
CMS1_k127_3799627_8 Belongs to the glutaredoxin family. Monothiol subfamily K07390 - - 0.000000000000000000000000000000000000000000000000000000000000000000002543 235.0
CMS1_k127_3799627_9 Sulphur oxidation protein SoxZ K17227 - - 0.0000000000000000000000000000000000000000000000000000001602 195.0
CMS1_k127_3822969_0 D-Ala-D-Ala carboxypeptidase 3 (S13) family K07259 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000162 372.0
CMS1_k127_3822969_1 - - - - 0.000000000000000005993 87.0
CMS1_k127_3843758_0 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen K00990 - 2.7.7.59 0.0 1680.0
CMS1_k127_3843758_1 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K07277 - - 0.0 1399.0
CMS1_k127_3843758_10 Belongs to the CDS family K00981 - 2.7.7.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004265 428.0
CMS1_k127_3843758_11 zinc metalloprotease K11749 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006392 380.0
CMS1_k127_3843758_12 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008954 342.0
CMS1_k127_3843758_13 Belongs to the skp family K06142 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001488 326.0
CMS1_k127_3843758_14 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0008693,GO:0009058,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0019171,GO:0019752,GO:0032787,GO:0042802,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0047451,GO:0071704,GO:0072330,GO:1901576 4.2.1.59 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001448 304.0
CMS1_k127_3843758_15 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002993 301.0
CMS1_k127_3843758_16 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008374,GO:0008610,GO:0008654,GO:0008780,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016740,GO:0016746,GO:0016747,GO:0019637,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.3.1.129 0.0000000000000000000000000000000000000000000000000000000000000000000000000001309 264.0
CMS1_k127_3843758_17 PFAM Glyoxalase bleomycin resistance protein dioxygenase K08234 - - 0.000000000000000000000000000000000000000000000000000000000000000000000004135 244.0
CMS1_k127_3843758_2 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 - 2.4.1.182 3.712e-238 738.0
CMS1_k127_3843758_3 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 3.574e-198 620.0
CMS1_k127_3843758_4 Two component signalling adaptor domain K03415 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002023 602.0
CMS1_k127_3843758_5 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003719 533.0
CMS1_k127_3843758_6 Methionine aminopeptidase K01265 - 3.4.11.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001407 493.0
CMS1_k127_3843758_7 Belongs to the universal ribosomal protein uS2 family K02967 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001906 469.0
CMS1_k127_3843758_8 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009561 462.0
CMS1_k127_3843758_9 Catalyzes the sequential condensation of isopentenyl diphosphate (IPP) with (2E,6E)-farnesyl diphosphate (E,E-FPP) to yield (2Z,6Z,10Z,14Z,18Z,22Z,26Z,30Z,34E,38E)-undecaprenyl diphosphate (di-trans,octa-cis-UPP). UPP is the precursor of glycosyl carrier lipid in the biosynthesis of bacterial cell wall polysaccharide components such as peptidoglycan and lipopolysaccharide K00806 - 2.5.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002828 458.0
CMS1_k127_3860958_0 Belongs to the dGTPase family. Type 2 subfamily K01129 - 3.1.5.1 1.258e-256 794.0
CMS1_k127_3860958_1 protein secretion K07114 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 8.637e-213 672.0
CMS1_k127_3904612_0 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 - 4.1.99.17 1.658e-288 885.0
CMS1_k127_3904612_1 PFAM FAD dependent oxidoreductase K03153 - 1.4.3.19 7.998e-206 647.0
CMS1_k127_3904612_2 Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S K03149 - 2.8.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004084 506.0
CMS1_k127_3904612_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006679 392.0
CMS1_k127_3904612_4 thiamine biosynthesis protein ThiS K03154 - - 0.000000000000000000005543 93.0
CMS1_k127_3904612_5 response regulator - - - 0.0008562 43.0
CMS1_k127_3923803_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K18138 - - 0.0 1829.0
CMS1_k127_3923803_1 von Willebrand factor (vWF) type A domain K07114 - - 0.0 1197.0
CMS1_k127_3923803_2 von Willebrand factor (vWF) type A domain K07114 - - 1.089e-215 673.0
CMS1_k127_3923803_3 Protein of unknown function DUF58 - - - 2.907e-201 629.0
CMS1_k127_3923803_4 PFAM ATPase family associated with various cellular activities (AAA) K03924 - - 1.866e-199 623.0
CMS1_k127_3923803_5 Alpha/beta hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001097 559.0
CMS1_k127_3923803_6 Barrel-sandwich domain of CusB or HlyD membrane-fusion K03585 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002484 496.0
CMS1_k127_3923803_7 transcriptional regulator, ArsR family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001893 406.0
CMS1_k127_3923803_8 Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001888 276.0
CMS1_k127_3946724_0 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.0 1465.0
CMS1_k127_3946724_2 TRAP-type mannitol chloroaromatic compound transport system, small permease component - - - 0.00000000000000000000000001284 109.0
CMS1_k127_3946724_3 His Kinase A (phosphoacceptor) domain - - - 0.000000000000101 70.0
CMS1_k127_395100_0 heavy metal translocating P-type ATPase K01533 - 3.6.3.4 0.0 1017.0
CMS1_k127_395100_1 FixH - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001832 328.0
CMS1_k127_4003199_0 Belongs to the ABC transporter superfamily K02031,K02032 - - 1.833e-321 987.0
CMS1_k127_4003199_1 inner membrane component K02034,K15582 - - 4.167e-262 811.0
CMS1_k127_4005426_0 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 5e-323 993.0
CMS1_k127_4005426_1 HI0933-like protein K07007 - - 1.838e-248 767.0
CMS1_k127_4005426_2 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family K00383 - 1.8.1.7 4.169e-213 663.0
CMS1_k127_4005426_3 Molybdopterin binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001751 475.0
CMS1_k127_4005426_4 Phosphomethylpyrimidine kinase K00941 - 2.7.1.49,2.7.4.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002572 456.0
CMS1_k127_4005426_5 Redoxin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000606 449.0
CMS1_k127_4005426_6 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005829 281.0
CMS1_k127_4018560_0 Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744 - - 0.0 1334.0
CMS1_k127_4018560_1 Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation K03771 - 5.2.1.8 3.129e-230 718.0
CMS1_k127_4018560_10 WLM domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009177 317.0
CMS1_k127_4018560_11 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.000000000000000000000000000000000000000000000000000000000000000000000000002859 254.0
CMS1_k127_4018560_12 HicA toxin of bacterial toxin-antitoxin, - - - 0.0000000000000000000000000000000000000000000000001287 177.0
CMS1_k127_4018560_2 PFAM Phosphotransferase enzyme family K07102 - 2.7.1.221 3.612e-212 661.0
CMS1_k127_4018560_3 Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) K00097 - 1.1.1.262 1.279e-197 620.0
CMS1_k127_4018560_4 Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress K04083 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001632 528.0
CMS1_k127_4018560_5 peroxidase K07223 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005547 520.0
CMS1_k127_4018560_6 Sodium Bile acid symporter family K03453 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001103 499.0
CMS1_k127_4018560_7 Belongs to the UPF0246 family K09861 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003115 483.0
CMS1_k127_4018560_8 PFAM Nucleotidyl transferase K00992 - 2.7.7.99 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005792 434.0
CMS1_k127_4018560_9 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009387 429.0
CMS1_k127_4023615_0 Glutamate synthase K00265 - 1.4.1.13,1.4.1.14 0.0 1284.0
CMS1_k127_4023615_1 Glutamate synthase K00266 - 1.4.1.13,1.4.1.14 6.476e-305 935.0
CMS1_k127_4031646_0 Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02400 - - 0.0 1300.0
CMS1_k127_4031646_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K03407 - 2.7.13.3 0.0 1221.0
CMS1_k127_4031646_10 Belongs to the ParA family K04562 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000284 344.0
CMS1_k127_4031646_11 Two component signalling adaptor domain K03408 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008734 326.0
CMS1_k127_4031646_12 Two component signalling adaptor domain K03408 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001723 322.0
CMS1_k127_4031646_13 cheY-homologous receiver domain K03413 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006105 270.0
CMS1_k127_4031646_14 response regulator receiver K03413 - - 0.00000000000000000000000000000000000000000000000000000000000000000004938 231.0
CMS1_k127_4031646_15 FlhB HrpN YscU SpaS Family K04061 - - 0.00000000000000000000000000000000000000000000008151 171.0
CMS1_k127_4031646_16 Role in flagellar biosynthesis K02420 - - 0.000000000000000000000000000000000000000000001608 166.0
CMS1_k127_4031646_17 FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation K02417 - - 0.000000000000000000000000000000000000000007922 158.0
CMS1_k127_4031646_18 STAS domain - - - 0.00000000000000000000000000000000000000001658 156.0
CMS1_k127_4031646_19 PFAM flagellar biosynthesis protein, FliO K02418 - - 0.0000000000000000000000000000000000003153 145.0
CMS1_k127_4031646_2 SRP54-type protein, GTPase domain K02404 - - 2.327e-230 716.0
CMS1_k127_4031646_20 Controls the rotational direction of flagella during chemotaxis K02415 - - 0.000000000000000000008288 91.0
CMS1_k127_4031646_3 FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation K02416 - - 4.548e-214 666.0
CMS1_k127_4031646_4 Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02401 - - 4.447e-212 662.0
CMS1_k127_4031646_5 Flagellar hook-length control protein FliK - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002407 547.0
CMS1_k127_4031646_6 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes K02405 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002127 453.0
CMS1_k127_4031646_7 Role in flagellar biosynthesis K02421 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003585 453.0
CMS1_k127_4031646_8 Plays a role in the flagellum-specific transport system K02419 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000137 449.0
CMS1_k127_4031646_9 Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P) K03414 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004508 364.0
CMS1_k127_4035476_0 phosphate transporter K03306 - - 5.209e-309 950.0
CMS1_k127_4035476_1 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K07636 - 2.7.13.3 3.829e-267 824.0
CMS1_k127_4035476_10 Belongs to the BolA IbaG family K05527 - - 0.0000000000000000003372 87.0
CMS1_k127_4035476_2 PFAM Binding-protein-dependent transport system inner membrane component K02038 - - 4.465e-214 667.0
CMS1_k127_4035476_3 TIGRFAM phosphate binding protein K02040 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001361 601.0
CMS1_k127_4035476_4 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002977 541.0
CMS1_k127_4035476_5 PFAM Ion transport protein K08714 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006805 506.0
CMS1_k127_4035476_6 TIGRFAM phosphate regulon transcriptional regulatory protein PhoB K07657 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000709 456.0
CMS1_k127_4035476_7 Plays a role in the regulation of phosphate uptake K02039 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003939 438.0
CMS1_k127_4035476_8 DsrE/DsrF-like family K09004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002446 273.0
CMS1_k127_4035476_9 nitric oxide dioxygenase activity - - - 0.0000000000000000000000000000000000000000000002038 167.0
CMS1_k127_4041067_0 Belongs to the TPP enzyme family K01652 - 2.2.1.6 0.0 1070.0
CMS1_k127_4041067_1 Thiol disulfide interchange protein K03673 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001681 389.0
CMS1_k127_4041067_2 PFAM Cytochrome c assembly protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000007475 254.0
CMS1_k127_4041067_3 tryptophan synthase subunit beta - - - 0.0000003789 51.0
CMS1_k127_4043391_0 Putative diguanylate phosphodiesterase - - - 0.0 1255.0
CMS1_k127_4097037_0 Putative diguanylate phosphodiesterase - - - 0.0 1227.0
CMS1_k127_4097037_1 GTP-binding protein TypA K06207 - - 0.0 1182.0
CMS1_k127_4097037_2 Belongs to the peptidase S33 family K01259 - 3.4.11.5 2.1e-199 622.0
CMS1_k127_4097037_3 heavy metal translocating P-type ATPase K01533 - 3.6.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001155 499.0
CMS1_k127_4097037_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001513 386.0
CMS1_k127_4097037_6 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 - - 0.0000000000000000000000000000000000000000000000000000000000000000001009 233.0
CMS1_k127_4097037_7 cytochrome oxidase maturation protein cbb3-type - - - 0.00000000000000000000000000001287 119.0
CMS1_k127_4097037_8 - K07112 - - 0.0000000000002924 69.0
CMS1_k127_4126023_0 Belongs to the CarB family K01955 - 6.3.5.5 0.0 2095.0
CMS1_k127_4126023_1 Belongs to the CarA family K01956 - 6.3.5.5 1.119e-243 753.0
CMS1_k127_4126023_2 ROK family K00845,K00847 - 2.7.1.2,2.7.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004783 537.0
CMS1_k127_4126023_3 Protein of unknown function (DUF455) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007299 502.0
CMS1_k127_4126023_4 Pfam Methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006381 422.0
CMS1_k127_4126023_5 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001436 302.0
CMS1_k127_4134677_0 PFAM aminotransferase class-III K00819,K00821 - 2.6.1.11,2.6.1.13,2.6.1.17 1.736e-234 727.0
CMS1_k127_4134677_1 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 2.644e-202 630.0
CMS1_k127_4134677_2 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 - 2.1.3.3 1.739e-195 610.0
CMS1_k127_4134677_3 Lipid A biosynthesis K02517 - 2.3.1.241 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000546 589.0
CMS1_k127_4134677_4 Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation K11085 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002838 427.0
CMS1_k127_4134677_5 Zinc-finger domain - - - 0.00000000000000000000000000000000003125 135.0
CMS1_k127_4134677_6 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.0000000000000000000004753 95.0
CMS1_k127_4139229_0 Serine/threonine phosphatases, family 2C, catalytic domain - - - 0.0 1059.0
CMS1_k127_4139229_1 RIO1 family K07178 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003105 531.0
CMS1_k127_4139229_2 Methylamine dehydrogenase heavy chain (MADH) K15229 - 1.4.9.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000132 381.0
CMS1_k127_4139229_3 Methylamine utilisation protein MauE - - - 0.0000000000000000000000000001251 122.0
CMS1_k127_4139229_4 Major Facilitator Superfamily K02575 - - 0.000000000000000004284 83.0
CMS1_k127_4160681_0 Belongs to the UPF0276 family K09930 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009076 534.0
CMS1_k127_4160681_1 TIGRFAM DJ-1 family protein K03152 - 3.5.1.124 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001988 327.0
CMS1_k127_4160681_2 protein conserved in bacteria K09929 - - 0.00000000000000000000000000000000000000000000000000000003262 200.0
CMS1_k127_4160681_3 - K01179 - 3.2.1.4 0.000000000000000000000000000000000006985 139.0
CMS1_k127_4281806_0 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses K01916,K01950 - 6.3.1.5,6.3.5.1 0.0 1009.0
CMS1_k127_4281806_1 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K05807 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001936 520.0
CMS1_k127_4281806_2 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.000000000000000000000000212 106.0
CMS1_k127_4364380_0 Pyrimidine nucleoside phosphorylase C-terminal domain - - - 1.071e-310 954.0
CMS1_k127_4364380_1 major facilitator superfamily - - - 6.266e-275 850.0
CMS1_k127_4364380_2 periplasmic secreted protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003819 366.0
CMS1_k127_4364380_3 Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP) K05774 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006015,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019200,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019634,GO:0019637,GO:0019674,GO:0019693,GO:0033863,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044262,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046390,GO:0046391,GO:0046483,GO:0046496,GO:0046835,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.4.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002832 341.0
CMS1_k127_4364380_4 Bacterial capsule synthesis protein PGA_cap K07282 - - 0.000000000000000000000000000000000000000000000000000000000000000003557 229.0
CMS1_k127_4388404_0 Histidine kinase K07717,K15011 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000115 599.0
CMS1_k127_4388404_1 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001979 353.0
CMS1_k127_4388404_2 Bacterial regulatory protein, Fis family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009968 334.0
CMS1_k127_4388404_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000009936 288.0
CMS1_k127_4388404_4 general secretion pathway protein K02456 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003448 277.0
CMS1_k127_4388404_5 Prokaryotic N-terminal methylation motif - - - 0.0000000000000000000000000003713 116.0
CMS1_k127_448179_0 Involved in the TonB-independent uptake of proteins K03641 - - 6.576e-257 796.0
CMS1_k127_448179_1 TonB C terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001535 514.0
CMS1_k127_448179_2 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003268 464.0
CMS1_k127_448179_3 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008368 451.0
CMS1_k127_448179_4 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) K06920 - 6.3.4.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009615 439.0
CMS1_k127_448179_5 YaeQ - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002072 343.0
CMS1_k127_448179_6 Belongs to the ompA family K03640 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005086 331.0
CMS1_k127_448179_7 Protein of unknown function (DUF1456) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009045 308.0
CMS1_k127_448179_8 Diguanylate cyclase - - - 0.00000000000000000000000000000004977 138.0
CMS1_k127_4524404_0 Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide K04656 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001473 606.0
CMS1_k127_4524404_1 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004657 426.0
CMS1_k127_4524404_11 Domain of unknown function (DUF4389) - - - 0.000000000000000000000000000000000000000000000006241 175.0
CMS1_k127_4524404_12 Domain in cystathionine beta-synthase and other proteins. - - - 0.00000000000000000000000000000000000000007202 155.0
CMS1_k127_4524404_13 LTXXQ motif family protein - - - 0.000000000000000000000000000000000000001927 155.0
CMS1_k127_4524404_2 OST-HTH/LOTUS domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003832 368.0
CMS1_k127_4524404_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001266 291.0
CMS1_k127_4524404_5 homoserine dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002696 248.0
CMS1_k127_4524404_6 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003165 249.0
CMS1_k127_4524404_7 Diguanylate cyclase phosphodiesterase with PAS PAC - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001661 250.0
CMS1_k127_4524404_9 PFAM Cold-shock protein, DNA-binding - - - 0.000000000000000000000000000000000000000000000000000000000000000896 224.0
CMS1_k127_4556295_0 PFAM Formylglycine-generating sulfatase enzyme - - - 7.423e-266 820.0
CMS1_k127_4556295_1 PFAM Aminotransferase class I and II K14155 - 4.4.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001998 603.0
CMS1_k127_4556295_2 Putative diguanylate phosphodiesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001382 362.0
CMS1_k127_4556295_3 alpha beta - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005339 275.0
CMS1_k127_4556295_4 Autotransporter beta-domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005797 279.0
CMS1_k127_4556295_5 Putative 2OG-Fe(II) oxygenase - - - 0.000000000000000000000000000000000000000004892 162.0
CMS1_k127_4566299_0 Glucose / Sorbosone dehydrogenase K21430 - - 5.463e-203 633.0
CMS1_k127_4566299_1 helicase superfamily c-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001215 545.0
CMS1_k127_4574918_0 protein conserved in bacteria K21470 - - 5.203e-320 985.0
CMS1_k127_4574918_1 Bacterial protein of unknown function (DUF882) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003875 377.0
CMS1_k127_4620077_0 PFAM polysaccharide export protein K01991 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001332 519.0
CMS1_k127_4620077_1 PFAM lipopolysaccharide biosynthesis - - - 0.0000000000000000000000000000000000000000004219 171.0
CMS1_k127_4635793_0 histidyl-tRNA synthetase K01892 - 6.1.1.21 5.439e-265 818.0
CMS1_k127_4635793_1 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 - 2.1.1.192 1.95e-245 758.0
CMS1_k127_4635793_2 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K17713 - - 1.421e-194 608.0
CMS1_k127_4635793_3 Tetratricopeptide repeat-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000183 371.0
CMS1_k127_4635793_4 Transcriptional regulator K13643 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004569 282.0
CMS1_k127_4635793_5 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 - 2.7.4.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000001078 266.0
CMS1_k127_4635793_6 sequence-specific DNA binding K15539 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0008150,GO:0008360,GO:0016020,GO:0016021,GO:0022603,GO:0022604,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0050789,GO:0050793,GO:0050794,GO:0051128,GO:0065007,GO:0065008,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000003296 246.0
CMS1_k127_4635793_7 Is able to transfer iron-sulfur clusters to apo- ferredoxin. Multiple cycles of 2Fe2S cluster formation and transfer are observed, suggesting that IscA acts catalytically. Recruits intracellular free iron so as to provide iron for the assembly of transient iron-sulfur cluster in IscU in the presence of IscS, L-cysteine and the thioredoxin reductase system K13628 - - 0.000000000000000000000000000000000000000000000000000000000000112 213.0
CMS1_k127_4635793_8 TIGRFAM Serine O-acetyltransferase K00640 - 2.3.1.30 0.000000000000000000000002036 102.0
CMS1_k127_4636216_0 helical bimodular (HBM) domain - - - 5.738e-245 782.0
CMS1_k127_4636216_1 Putative diguanylate phosphodiesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001439 475.0
CMS1_k127_4636216_2 Two component signalling adaptor domain K03408 - - 0.00000000000000000000000000000000000000000000000000005653 192.0
CMS1_k127_4636216_3 Phage integrase family - - - 0.000000000006631 68.0
CMS1_k127_4636216_4 Filamentation induced by cAMP protein fic - - - 0.0000004165 51.0
CMS1_k127_4658367_0 PAS domain K13924 - 2.1.1.80,3.1.1.61 0.0 1641.0
CMS1_k127_4658367_1 TIGRFAM ATP-dependent DNA helicase, RecQ K03654 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007997 374.0
CMS1_k127_4658367_2 Diguanylate cyclase phosphodiesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002637 325.0
CMS1_k127_4672565_0 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K18979 - 1.17.99.6 4.781e-247 767.0
CMS1_k127_4672565_1 N-acetylmuramoyl-L-alanine amidase K01448 - 3.5.1.28 1.064e-206 647.0
CMS1_k127_4672565_2 PFAM Uncharacterised P-loop hydrolase UPF0079 K06925 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006996 307.0
CMS1_k127_4672565_3 Belongs to the dGTPase family. Type 2 subfamily K01129 - 3.1.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002215 280.0
CMS1_k127_4698281_0 gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.0 1044.0
CMS1_k127_4698281_1 transporter, dctM subunit - - - 4.605e-260 804.0
CMS1_k127_4698281_10 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003953 433.0
CMS1_k127_4698281_11 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate K00931 - 2.7.2.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006612 407.0
CMS1_k127_4698281_12 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001354 395.0
CMS1_k127_4698281_13 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008829 366.0
CMS1_k127_4698281_14 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007034 351.0
CMS1_k127_4698281_15 TRAP-type mannitol chloroaromatic compound transport system, small permease component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003156 301.0
CMS1_k127_4698281_16 AsnC family transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003896 288.0
CMS1_k127_4698281_17 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002491 246.0
CMS1_k127_4698281_18 Domain of unknown function DUF302 - - - 0.000000000000000000000000000000000000000000000000000000000000000000296 230.0
CMS1_k127_4698281_19 This protein binds to 23S rRNA in the presence of protein L20 K02888 - - 0.0000000000000000000000000000000000000000000000000000000001354 204.0
CMS1_k127_4698281_2 Major Facilitator Superfamily - - - 2.375e-257 796.0
CMS1_k127_4698281_20 Belongs to the bacterial ribosomal protein bL27 family K02899 GO:0000027,GO:0001558,GO:0003674,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040008,GO:0042254,GO:0042255,GO:0042256,GO:0042273,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0044877,GO:0048518,GO:0050789,GO:0050794,GO:0051128,GO:0065003,GO:0065007,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090069,GO:0090070,GO:1901564,GO:1901566,GO:1901576,GO:1902626,GO:1990904 - 0.000000000000000000000000000000000000000000000005306 172.0
CMS1_k127_4698281_21 Aminoacyl-tRNA editing domain K19055 - - 0.00000000000000000000000000000000000000001437 159.0
CMS1_k127_4698281_3 Part of the tripartite ATP-independent periplasmic (TRAP) transport system - - - 2.513e-241 745.0
CMS1_k127_4698281_4 short chain amide porin - - - 1.209e-226 703.0
CMS1_k127_4698281_5 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 2.795e-225 699.0
CMS1_k127_4698281_6 Sulphur transport - - - 4.439e-196 615.0
CMS1_k127_4698281_7 Belongs to the FPP GGPP synthase family K02523 - 2.5.1.90 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009375 603.0
CMS1_k127_4698281_8 Sulfite exporter TauE/SafE - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001827 487.0
CMS1_k127_4698281_9 COG0491 Zn-dependent hydrolases, including glyoxylases K01069 - 3.1.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004522 476.0
CMS1_k127_4704522_0 oxidoreductase - - - 2.556e-247 765.0
CMS1_k127_4704522_1 Beta-ketoacyl synthase, N-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003954 469.0
CMS1_k127_4704522_2 Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003215 447.0
CMS1_k127_4704522_3 KR domain K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001209 437.0
CMS1_k127_4704522_4 DUF218 domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001515 320.0
CMS1_k127_4704522_5 dehydratase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002735 246.0
CMS1_k127_4704522_6 MMPL family - - - 0.000000000000000000000000000000000000000000000000000000000000000000005586 236.0
CMS1_k127_4704522_7 - - - - 0.000000000000000000000000000000000000000000000000000000006604 200.0
CMS1_k127_4706904_0 DnaJ molecular chaperone homology domain K05801 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008087 467.0
CMS1_k127_4706904_1 TIGRFAM Hydrogenase accessory protein HypB K04652 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005962 418.0
CMS1_k127_4706904_2 Belongs to the NiCoT transporter (TC 2.A.52) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005995 309.0
CMS1_k127_4706904_3 Low affinity iron permease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000008065 237.0
CMS1_k127_4706904_4 PFAM hydrogenase expression formation protein (HUPF HYPC) K04653 - - 0.00000000000000000000002393 100.0
CMS1_k127_4739653_0 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 - 6.1.1.1 4.774e-242 749.0
CMS1_k127_4739653_1 Catalyzes the conversion of dihydroorotate to orotate K17828 - 1.3.1.14 0.0000000000000000000000000000001795 123.0
CMS1_k127_4746553_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 0.0 1213.0
CMS1_k127_4746553_1 signal peptide peptidase SppA, 36K type K04773 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001676 462.0
CMS1_k127_4746553_2 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995 - 2.7.8.5 0.0000000000000000000000000000000000000000004363 158.0
CMS1_k127_4748003_0 Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate K01952 - 6.3.5.3 0.0 2490.0
CMS1_k127_4748003_1 Belongs to the 5'-nucleotidase family K17224 - - 0.0 1249.0
CMS1_k127_4748003_10 NlpB/DapX lipoprotein - - - 1.58e-218 680.0
CMS1_k127_4748003_11 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 3.66e-214 669.0
CMS1_k127_4748003_12 LysR substrate binding domain - - - 8.185e-201 626.0
CMS1_k127_4748003_13 periplasmic ligand-binding sensor domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006099 602.0
CMS1_k127_4748003_14 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000297 603.0
CMS1_k127_4748003_15 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004164 562.0
CMS1_k127_4748003_16 Ion channel K10716 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003711 425.0
CMS1_k127_4748003_17 Belongs to the UPF0149 family K09895 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007167 391.0
CMS1_k127_4748003_18 riboflavin synthase, alpha K00793 - 2.5.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007242 383.0
CMS1_k127_4748003_19 Belongs to the 5-formyltetrahydrofolate cyclo-ligase family K01934 - 6.3.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004493 321.0
CMS1_k127_4748003_2 ABC transporter - - - 0.0 1075.0
CMS1_k127_4748003_20 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006126 303.0
CMS1_k127_4748003_21 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 - 2.5.1.78 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001735 302.0
CMS1_k127_4748003_22 DsrE/DsrF-like family K09004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002461 295.0
CMS1_k127_4748003_23 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002242 293.0
CMS1_k127_4748003_24 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03564 - 1.11.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000001217 265.0
CMS1_k127_4748003_26 Protein of unknown function (DUF3579) - - - 0.00000000000000000000000000000000000000000000000000000002922 196.0
CMS1_k127_4748003_27 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.00000000000000000000000000000000000000000006915 162.0
CMS1_k127_4748003_28 N-acetylmuramoyl-L-alanine amidase K01448 - 3.5.1.28 0.000000000000000000000000000000000008132 136.0
CMS1_k127_4748003_3 PFAM PhoH-like protein K07175 - - 7.495e-299 918.0
CMS1_k127_4748003_4 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 8.683e-279 857.0
CMS1_k127_4748003_5 Belongs to the peptidase M24B family K01262 - 3.4.11.9 5.82e-266 821.0
CMS1_k127_4748003_6 Ubiquinone biosynthesis hydroxylase, UbiH UbiF VisC COQ6 K18800 - - 8.011e-259 802.0
CMS1_k127_4748003_7 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 3.782e-232 720.0
CMS1_k127_4748003_8 Ubiquinone biosynthesis hydroxylase, UbiH UbiF VisC COQ6 K03185 - - 1.33e-226 706.0
CMS1_k127_4748003_9 Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) K01626 - 2.5.1.54 1.249e-225 700.0
CMS1_k127_4754703_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 2.441e-273 871.0
CMS1_k127_4754703_1 Acetyltransferase (GNAT) domain - - - 5.771e-200 638.0
CMS1_k127_4770254_0 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735 - 4.2.3.4 4.169e-209 651.0
CMS1_k127_4770254_1 Belongs to the glucose-6-phosphate 1-epimerase family K01792 - 5.1.3.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004856 565.0
CMS1_k127_4770254_2 Protein of unknown function (DUF1275) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000156 415.0
CMS1_k127_4808805_0 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007 - 2.7.9.2 0.0 1568.0
CMS1_k127_4808805_1 Diguanylate cyclase - - - 0.0 1520.0
CMS1_k127_4808805_10 DNA glycosylase K03649 - 3.2.2.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004302 284.0
CMS1_k127_4808805_11 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000001648 237.0
CMS1_k127_4808805_12 4Fe-4S binding domain - - - 0.0000000000000000000000000000000000000000000000002033 176.0
CMS1_k127_4808805_13 Glutathione S-transferase K00799 - 2.5.1.18 0.00000000000000000000000000000000000000000001831 161.0
CMS1_k127_4808805_14 - - - - 0.000000000267 62.0
CMS1_k127_4808805_2 PFAM Peptidase family U32 K08303 - - 0.0 1003.0
CMS1_k127_4808805_3 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 9.769e-293 900.0
CMS1_k127_4808805_4 phosphate-selective porin O and P - - - 4.776e-235 730.0
CMS1_k127_4808805_5 Belongs to the AlaDH PNT family K00259 - 1.4.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004332 546.0
CMS1_k127_4808805_6 PFAM PepSY-associated TM helix domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001264 411.0
CMS1_k127_4808805_7 Peptidyl-prolyl cis-trans isomerase K03773 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001907 398.0
CMS1_k127_4808805_8 mechanosensitive ion channel - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000505 368.0
CMS1_k127_4808805_9 FMN_bind - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001134 352.0
CMS1_k127_4822749_0 Belongs to the GPI family K01810 - 5.3.1.9 0.0 1003.0
CMS1_k127_4822749_1 Phosphoglucomutase phosphomannomutase alpha beta alpha domain I K01840,K15778 - 5.4.2.2,5.4.2.8 1.01e-293 902.0
CMS1_k127_4822749_2 Permease YjgP YjgQ K11720 - - 5.944e-210 655.0
CMS1_k127_4822749_3 Permease YjgP YjgQ K07091 - - 1.304e-204 641.0
CMS1_k127_4822749_4 Specifically methylates the adenine in position 2030 of 23S rRNA K07115 - 2.1.1.266 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001262 560.0
CMS1_k127_4822749_5 UTP-glucose-1-phosphate uridylyltransferase K00963 - 2.7.7.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002764 500.0
CMS1_k127_4822749_6 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001029 331.0
CMS1_k127_4822749_7 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003211 322.0
CMS1_k127_4822749_8 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000006849 273.0
CMS1_k127_4834550_0 AMP-binding enzyme - - - 1.276e-235 735.0
CMS1_k127_4834550_1 dehydratase - - - 0.0000000000000000000000000000000000000000000001478 169.0
CMS1_k127_4834550_2 Phosphopantetheine attachment site K02078 - - 0.00000000000000000000000000000000000000000001411 162.0
CMS1_k127_4834550_3 Acyltransferase K00655 - 2.3.1.51 0.00000000001187 66.0
CMS1_k127_4843536_0 synthase K01641,K15311 - 2.3.3.10 4.558e-242 749.0
CMS1_k127_4843536_1 Hydroxymethylglutaryl-coenzyme A reductase K00021 - 1.1.1.34 3.873e-218 677.0
CMS1_k127_4843536_10 stringent starvation protein b K03600 GO:0000502,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0008150,GO:0009376,GO:0009893,GO:0009894,GO:0009896,GO:0010604,GO:0019222,GO:0019899,GO:0031597,GO:0032781,GO:0032991,GO:0042176,GO:0042802,GO:0042803,GO:0043085,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043462,GO:0044093,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0045732,GO:0046983,GO:0048518,GO:0050789,GO:0050790,GO:0051117,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0051336,GO:0051345,GO:0060255,GO:0065007,GO:0065009,GO:0080090,GO:0097159,GO:1901363,GO:1902494,GO:1904949,GO:1905368,GO:1905369,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002716 286.0
CMS1_k127_4843536_11 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000001572 79.0
CMS1_k127_4843536_2 Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP) K01823 - 5.3.3.2 6.358e-210 654.0
CMS1_k127_4843536_3 GHMP kinases N terminal domain K00869 - 2.7.1.36 3.803e-207 646.0
CMS1_k127_4843536_4 TIGRFAM KamA family protein K19810 - - 1.885e-195 611.0
CMS1_k127_4843536_5 GHMP kinases N terminal domain K01597 - 4.1.1.33 6.474e-194 608.0
CMS1_k127_4843536_6 class II (D, K and N) K04568 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008285 589.0
CMS1_k127_4843536_7 GHMP kinases N terminal domain K00869 - 2.7.1.36 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003214 550.0
CMS1_k127_4843536_8 Stringent starvation protein A K03599 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001187 409.0
CMS1_k127_4843536_9 Involved in peptide bond synthesis. Alleviates ribosome stalling that occurs when 3 or more consecutive Pro residues or the sequence PPG is present in a protein, possibly by augmenting the peptidyl transferase activity of the ribosome. Modification of Lys-34 is required for alleviation K02356 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007612 358.0
CMS1_k127_4847474_0 Protein of unknown function (DUF3379) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005063 440.0
CMS1_k127_4847474_1 Putative diguanylate phosphodiesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002109 400.0
CMS1_k127_4847474_2 Sigma-70, region 4 K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009513 321.0
CMS1_k127_4903028_0 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides K00525 - 1.17.4.1 0.0 1519.0
CMS1_k127_4903028_1 Diguanylate cyclase K03320 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002132 325.0
CMS1_k127_492095_0 transporter of a GTP-driven Fe(2 ) uptake system K04759 - - 0.0 1448.0
CMS1_k127_492095_1 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 8.641e-263 811.0
CMS1_k127_492095_10 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004182 391.0
CMS1_k127_492095_11 Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD( ) K02823 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005958 372.0
CMS1_k127_492095_12 YGGT family K02221 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001505 353.0
CMS1_k127_492095_13 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005405 267.0
CMS1_k127_492095_14 Tfp pilus assembly protein FimV - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006394 268.0
CMS1_k127_492095_15 coenzyme F420 binding K07226 - - 0.000000000000000000000000000000000000000000000000000000000000000000004965 238.0
CMS1_k127_492095_16 - - - - 0.000000000000000000000000000000000000000000000001539 174.0
CMS1_k127_492095_17 FeoC like transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000621 169.0
CMS1_k127_492095_2 Transfers a succinyl group from succinyl-CoA to L- homoserine, forming succinyl-L-homoserine K00641 - 2.3.1.31 1.189e-250 774.0
CMS1_k127_492095_3 Large extracellular alpha-helical protein - - - 5.33e-247 782.0
CMS1_k127_492095_4 - - - - 5.723e-195 609.0
CMS1_k127_492095_5 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007448 511.0
CMS1_k127_492095_6 Polyphosphate kinase 2 (PPK2) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001144 507.0
CMS1_k127_492095_8 Methionine biosynthesis protein MetW - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002231 422.0
CMS1_k127_492095_9 Carboxylesterase K06999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001185 392.0
CMS1_k127_4923584_0 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region K00275 - 1.4.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000688 330.0
CMS1_k127_4923584_1 Protein of unknown function (DUF1722) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003135 318.0
CMS1_k127_4923584_2 Lipocalin-like domain K03098 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001573 255.0
CMS1_k127_4923584_3 Domain of unknown function (DUF1731) K07071 - - 0.0000000000000000000000006057 105.0
CMS1_k127_4923584_4 Tryptophan-rich protein (DUF2389) - - - 0.00000000000000000000806 95.0
CMS1_k127_492396_0 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 1.246e-307 945.0
CMS1_k127_492396_1 Belongs to the Orn Lys Arg decarboxylase class-II family K01581,K01586 - 4.1.1.17,4.1.1.20 1.007e-244 757.0
CMS1_k127_492396_2 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766 - 2.4.2.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002141 600.0
CMS1_k127_492396_3 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006048 550.0
CMS1_k127_492396_4 Belongs to the TrpC family K01609,K13498 - 4.1.1.48,5.3.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001707 508.0
CMS1_k127_492396_5 HAD-hyrolase-like K01091 - 3.1.3.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000937 451.0
CMS1_k127_492396_6 Glutamine amidotransferase of anthranilate synthase K01658 - 4.1.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003098 390.0
CMS1_k127_492396_7 Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine K01611 - 4.1.1.50 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001493 325.0
CMS1_k127_492396_8 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003982 276.0
CMS1_k127_492396_9 Protein of unknown function (DUF454) K09790 - - 0.00000000000000000000000000000000000000000000000714 175.0
CMS1_k127_4967637_0 regulator of chromosome condensation, RCC1 - - - 0.0 1037.0
CMS1_k127_4967637_1 ABC transporter transmembrane region K12541 - - 1.074e-251 796.0
CMS1_k127_4967637_2 Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN NodQ subfamily K00956 - 2.7.7.4 2.159e-248 780.0
CMS1_k127_4967637_3 TIGRFAM sulfate adenylyltransferase, small subunit K00957 - 2.7.7.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004656 475.0
CMS1_k127_4967637_4 Biotin-lipoyl like K12542 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000028 476.0
CMS1_k127_4967637_5 Outer membrane efflux protein K12543 - - 0.00000000000000000000000000000000000000000000000000000000000000000004736 247.0
CMS1_k127_5026258_0 type I secretion outer membrane protein, TolC K12340,K12538 - - 4.33e-241 750.0
CMS1_k127_5026258_1 PFAM Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 3.476e-238 740.0
CMS1_k127_5026258_2 CYTH K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000001371 202.0
CMS1_k127_5026258_3 Belongs to the cysteine synthase cystathionine beta- synthase family K12339 - 2.5.1.47 0.0000000000000000000000000000000000000000000000000001034 186.0
CMS1_k127_5059081_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.0 2220.0
CMS1_k127_5059081_1 Peptidoglycan-binding protein, CsiV - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002804 409.0
CMS1_k127_5059081_2 growth of symbiont in host cell K07003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001062 405.0
CMS1_k127_5059081_3 Haem-degrading - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001225 302.0
CMS1_k127_5059081_4 PFAM Pyridine nucleotide-disulphide oxidoreductase K17218 - 1.8.5.4 0.000000000000000000000000000000000000000000000000000001107 193.0
CMS1_k127_5061311_0 Amino acid kinase family K00928 - 2.7.2.4 4.817e-302 929.0
CMS1_k127_5061311_1 COG0457 FOG TPR repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003502 406.0
CMS1_k127_5061311_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006723 301.0
CMS1_k127_5061311_3 - - - - 0.00000000000000000000000000000000000000003567 155.0
CMS1_k127_5075980_0 Isocitrate dehydrogenase NADP-dependent, monomeric type K00031 - 1.1.1.42 0.0 1317.0
CMS1_k127_5075980_1 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 3.159e-243 752.0
CMS1_k127_5075980_2 High frequency lysogenization protein hflD homolog K07153 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006658 434.0
CMS1_k127_5075980_3 Belongs to the pseudouridine synthase RsuA family K06181 - 5.4.99.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003112 363.0
CMS1_k127_5075980_4 DNA-J related protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001611 353.0
CMS1_k127_5089413_0 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 - - 1.088e-288 889.0
CMS1_k127_5089413_1 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 1.61e-230 716.0
CMS1_k127_5089413_10 membrane - - - 0.0000000000000000000000000000000002291 133.0
CMS1_k127_5089413_11 Belongs to the bacterial ribosomal protein bL34 family K02914 - - 0.000000000000000000003518 93.0
CMS1_k127_5089413_2 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP K03629 - - 2.621e-215 670.0
CMS1_k127_5089413_3 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003357 505.0
CMS1_k127_5089413_4 Sulfite exporter TauE/SafE K07090 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000181 486.0
CMS1_k127_5089413_5 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004253 274.0
CMS1_k127_5089413_6 Beta-lactamase superfamily domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001691 266.0
CMS1_k127_5089413_7 SNARE associated Golgi protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000006793 256.0
CMS1_k127_5089413_8 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000008364 257.0
CMS1_k127_5089413_9 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000006607 249.0
CMS1_k127_5100312_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 1.197e-236 732.0
CMS1_k127_5100312_1 Patatin-like phospholipase K07001 - - 8.136e-236 735.0
CMS1_k127_5100312_2 paraquat-inducible protein A - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006538 331.0
CMS1_k127_5100312_3 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.000000000000000000000000000000000000000000000000000000000000000000000000000000175 267.0
CMS1_k127_5100312_4 Thioredoxin domain - - - 0.00000000000000000000000000003928 121.0
CMS1_k127_5139604_0 TIGRFAM TIGR02099 family protein - - - 0.0 2047.0
CMS1_k127_5139604_1 ribonuclease, Rne Rng family K08301 - - 1.847e-304 934.0
CMS1_k127_5140488_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K03407 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003201 387.0
CMS1_k127_5140488_1 Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis K03411 - 3.5.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001435 384.0
CMS1_k127_5140488_2 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K11991 - 3.5.4.33 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001858 326.0
CMS1_k127_5140488_3 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 0.00000000000001481 72.0
CMS1_k127_5144682_0 Cation transporter/ATPase, N-terminus K01539 - 3.6.3.9 0.0 1088.0
CMS1_k127_5144682_1 Amino acid permease - - - 2.629e-245 763.0
CMS1_k127_5144682_10 Short repeat of unknown function (DUF308) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009277 312.0
CMS1_k127_5144682_11 cellular response to DNA damage stimulus K07340 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005614 259.0
CMS1_k127_5144682_12 effector of murein hydrolase LrgA K06518 - - 0.00000000000000000000000000000000000000000000000000000000002176 207.0
CMS1_k127_5144682_13 PFAM Small Multidrug Resistance protein K03297 - - 0.0000000000000000000000000000000000000000000000000000001851 195.0
CMS1_k127_5144682_2 PFAM SPFH domain Band 7 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009544 544.0
CMS1_k127_5144682_3 FmdE, Molybdenum formylmethanofuran dehydrogenase operon - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001227 498.0
CMS1_k127_5144682_4 Uncharacterised ACR, YagE family COG1723 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001273 472.0
CMS1_k127_5144682_5 effector of murein hydrolase - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009588 437.0
CMS1_k127_5144682_7 Transcriptional regulatory protein, C terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003772 370.0
CMS1_k127_5144682_9 Cytochrome P460 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009709 341.0
CMS1_k127_5177671_0 TIGRFAM type I secretion membrane fusion protein, HlyD family K12542 - - 6.304e-264 816.0
CMS1_k127_5177671_1 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001202 347.0
CMS1_k127_5177671_2 ABC transporter transmembrane region K12541 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002819 244.0
CMS1_k127_5276276_0 DHH family K07462 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002097 518.0
CMS1_k127_5276276_1 Threonine synthase K01733 - 4.2.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001351 352.0
CMS1_k127_5279239_0 transferase activity, transferring acyl groups other than amino-acyl groups - - - 1.272e-250 777.0
CMS1_k127_5279239_1 GtrA-like protein - - - 7.035e-230 713.0
CMS1_k127_5279239_2 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 3.851e-206 642.0
CMS1_k127_5279239_3 PFAM DTW domain containing protein K05812 - - 0.00000000000000000000000001307 109.0
CMS1_k127_5308901_0 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009468 502.0
CMS1_k127_5308901_1 Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione K01759 - 4.4.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000006656 261.0
CMS1_k127_5308901_2 Protein of unknown function (DUF2721) - - - 0.0000000000000000000000000000000000000000000000000000000000000000008051 232.0
CMS1_k127_5308901_3 DNA-binding transcription factor activity - - - 0.00000000000000000000000000000000000000000000000000000000000000004028 225.0
CMS1_k127_5308901_4 major facilitator superfamily K05820 - - 0.0000000003942 60.0
CMS1_k127_5326246_0 Arginyl-tRNA synthetase K01887 - 6.1.1.19 0.0 1134.0
CMS1_k127_5326246_1 diguanylate cyclase K13590 - 2.7.7.65 1.002e-200 629.0
CMS1_k127_5326246_2 Sporulation related domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001655 401.0
CMS1_k127_5326246_3 magnesium chelatase K07391 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001122 261.0
CMS1_k127_5326246_4 long-chain fatty acid transporting porin activity K09806 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000000000000000008877 148.0
CMS1_k127_534058_0 Belongs to the heme-copper respiratory oxidase family K00404 - 1.9.3.1 3.194e-315 966.0
CMS1_k127_534058_1 TIGRFAM cytochrome c oxidase accessory protein FixG - - - 2.251e-310 952.0
CMS1_k127_534058_10 Thioesterase domain K02170 - 3.1.1.85 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001294 501.0
CMS1_k127_534058_11 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002067 489.0
CMS1_k127_534058_12 cation diffusion facilitator family transporter K16264 GO:0000041,GO:0003674,GO:0005215,GO:0005385,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006829,GO:0008150,GO:0008324,GO:0015075,GO:0015318,GO:0016020,GO:0022857,GO:0022890,GO:0030001,GO:0034220,GO:0044464,GO:0046873,GO:0046915,GO:0051179,GO:0051234,GO:0055085,GO:0070838,GO:0071577,GO:0071944,GO:0072509,GO:0072511,GO:0098655,GO:0098660,GO:0098662 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003712 491.0
CMS1_k127_534058_13 1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase K01814 - 5.3.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000648 486.0
CMS1_k127_534058_14 Putative neutral zinc metallopeptidase K06973 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002403 429.0
CMS1_k127_534058_15 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002064 419.0
CMS1_k127_534058_16 imidazoleglycerol-phosphate dehydratase K01089,K01693 - 3.1.3.15,4.2.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000247 395.0
CMS1_k127_534058_17 Competence protein - GO:0006139,GO:0006259,GO:0006308,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0015976,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:1901360,GO:1901361,GO:1901575 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006143 377.0
CMS1_k127_534058_18 Protein of unknown function, DUF255 K06888 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008765 280.0
CMS1_k127_534058_19 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation K03117 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004714 263.0
CMS1_k127_534058_2 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00652 - 2.3.1.47 3.215e-225 701.0
CMS1_k127_534058_20 Cation transporter/ATPase, N-terminus K01539 - 3.6.3.9 0.00000000000000000000000000000000000000000000000000000000000003013 214.0
CMS1_k127_534058_21 COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases K02503 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006522,GO:0006524,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009078,GO:0009080,GO:0009987,GO:0016054,GO:0016787,GO:0016810,GO:0016811,GO:0019478,GO:0019752,GO:0043436,GO:0043530,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046144,GO:0046395,GO:0046416,GO:0046436,GO:0055130,GO:0071704,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 - 0.0000000000000000000000000000000000000000000000000000000000005558 211.0
CMS1_k127_534058_22 PFAM phosphoribosyl-ATP pyrophosphohydrolase K01523 - 3.6.1.31 0.00000000000000000000000000000000000000000000000000000000001134 207.0
CMS1_k127_534058_23 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.00000000000000000000000000000000000149 140.0
CMS1_k127_534058_3 Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism K01012 - 2.8.1.6 3.831e-215 669.0
CMS1_k127_534058_4 Protein of unknown function, DUF255 K06888 - - 1.664e-208 659.0
CMS1_k127_534058_5 C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex K00406 - - 5.944e-196 611.0
CMS1_k127_534058_6 Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl- L-methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway K02169 - 2.1.1.197 6.621e-194 606.0
CMS1_k127_534058_7 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000699 585.0
CMS1_k127_534058_8 TIGRFAM cytochrome c oxidase, cbb3-type, subunit II K00405 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005692 572.0
CMS1_k127_534058_9 Domain of Unknown Function (DUF748) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004533 597.0
CMS1_k127_5369031_0 His Kinase A (phosphoacceptor) domain - - - 0.0 1020.0
CMS1_k127_5369031_1 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 - 4.2.1.2 8.65e-284 874.0
CMS1_k127_5369031_2 Uncharacterised protein family (UPF0160) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000189 534.0
CMS1_k127_5369031_3 PFAM Response regulator receiver domain K07689 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003038 396.0
CMS1_k127_5369031_4 Thioredoxin K03671 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003127 253.0
CMS1_k127_5369031_5 Belongs to the nitrite and sulfite reductase 4Fe-4S domain family - - - 0.000000000000000000000000000000000000000004493 156.0
CMS1_k127_5369031_6 - - - - 0.000000000000000000000000007291 110.0
CMS1_k127_5384497_0 Catalyzes carboxymethyl transfer from carboxy-S- adenosyl-L-methionine (Cx-SAM) to 5-hydroxyuridine (ho5U) to form 5-carboxymethoxyuridine (cmo5U) at position 34 in tRNAs K15257 - - 6.125e-226 700.0
CMS1_k127_5384497_1 Catalyzes the conversion of S-adenosyl-L-methionine (SAM) to carboxy-S-adenosyl-L-methionine (Cx-SAM) K15256 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001384 472.0
CMS1_k127_5384497_2 Bacterial protein of unknown function (DUF883) - - - 0.0000000000000000000002184 100.0
CMS1_k127_5384497_3 Putative Actinobacterial Holin-X, holin superfamily III - - - 0.00000000009183 68.0
CMS1_k127_5399256_0 CRISPR-associated protein, APE2256 family - - - 5.699e-246 765.0
CMS1_k127_5399256_1 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03469 - 3.1.26.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005454 502.0
CMS1_k127_5399256_2 RNA pseudouridylate synthase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007617 414.0
CMS1_k127_5399256_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000042 348.0
CMS1_k127_5399256_4 - - - - 0.00000000000000000000000000000000000000000000000000000009271 196.0
CMS1_k127_5402093_0 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 - 6.3.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002876 577.0
CMS1_k127_5402093_1 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.00000000000000000000000000000000000000000000003141 170.0
CMS1_k127_5402093_2 Belongs to the PsiE family K13256 - - 0.0000000000000000000000000000000000000000000000591 174.0
CMS1_k127_5402093_3 Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring K01935 GO:0003674,GO:0003824,GO:0004141,GO:0016874,GO:0016879,GO:0016882 6.3.3.3 0.0000003413 53.0
CMS1_k127_5402144_0 PFAM Binding-protein-dependent transport system inner membrane component K02037 - - 0.0 1020.0
CMS1_k127_5402144_1 PFAM Binding-protein-dependent transport system inner membrane component K02038 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000898 271.0
CMS1_k127_5414130_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.0 1798.0
CMS1_k127_5414130_1 TIGRFAM ATP-dependent DNA helicase, RecQ K03654 - 3.6.4.12 3.309e-260 803.0
CMS1_k127_5414130_2 Belongs to the pseudomonas-type ThrB family K02204 - 2.7.1.39 8.304e-195 609.0
CMS1_k127_5414130_3 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000197 560.0
CMS1_k127_5414130_4 COG0474 Cation transport ATPase K01537 - 3.6.3.8 0.00000000000000000000000000000000000000002193 158.0
CMS1_k127_5453749_0 Lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002207 567.0
CMS1_k127_5453749_1 Protein of unknown function (DUF3616) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002578 537.0
CMS1_k127_5453749_2 Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine cysteine desulfurase (IscS) system K14058 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001782 486.0
CMS1_k127_5453749_3 Response regulator containing a CheY-like receiver domain and an HD-GYP domain - - - 0.0000000000000000000000000000000001559 134.0
CMS1_k127_5474769_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K18303 - - 4e-323 993.0
CMS1_k127_5474769_1 Barrel-sandwich domain of CusB or HlyD membrane-fusion K18302 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002529 561.0
CMS1_k127_547862_0 NMT1-like family K15576 - - 3.517e-296 910.0
CMS1_k127_547862_1 Glycosyl transferases group 1 - - - 1.854e-253 785.0
CMS1_k127_547862_10 response regulator K07183 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002473 344.0
CMS1_k127_547862_12 Peptidyl-prolyl cis-trans isomerase K03774 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007181 267.0
CMS1_k127_547862_13 cytochrome - - - 0.0000000000000000000000000000000000000000000000000000000000002097 218.0
CMS1_k127_547862_14 PFAM response regulator receiver K07183 - - 0.000000000000000000000000000000000000000000000000000000000001308 211.0
CMS1_k127_547862_15 - - - - 0.0000000000000000000000000000000000000000000000000000009235 192.0
CMS1_k127_547862_16 DNA-binding protein VF530 - - - 0.0000000000000000000000000000000000000000000001146 170.0
CMS1_k127_547862_2 TIGRFAM Diguanylate cyclase - - - 6.935e-235 730.0
CMS1_k127_547862_3 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 7.084e-234 726.0
CMS1_k127_547862_4 NMT1-like family K22067 - - 1.707e-221 689.0
CMS1_k127_547862_5 transporter, permease K15577 - - 1.026e-202 632.0
CMS1_k127_547862_6 6-phosphogluconate dehydrogenase, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004853 597.0
CMS1_k127_547862_7 TIGRFAM Nitrate transport ATP-binding K15578 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001533 521.0
CMS1_k127_547862_8 General glycosylation pathway protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005308 495.0
CMS1_k127_547862_9 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001459 370.0
CMS1_k127_5523119_0 Vitamin B12 dependent methionine synthase, activation K00548 - 2.1.1.13 0.0 2430.0
CMS1_k127_5523119_1 Response regulator containing a CheY-like receiver domain and an HD-GYP domain - - - 3.98e-264 816.0
CMS1_k127_5523119_2 His Kinase A (phosphoacceptor) domain - - - 5.486e-256 796.0
CMS1_k127_5523119_3 Response regulator containing a CheY-like receiver domain and a GGDEF domain - - - 3.268e-226 705.0
CMS1_k127_5523119_4 Dual-specificity methyltransferase that catalyzes the formation of 5-methyluridine at position 54 (m5U54) in all tRNAs, and that of position 341 (m5U341) in tmRNA (transfer-mRNA) K00557 GO:0000049,GO:0001510,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016300,GO:0016740,GO:0016741,GO:0019843,GO:0030488,GO:0030696,GO:0030697,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0140098,GO:0140101,GO:1901360,GO:1901363 2.1.1.35 2.434e-217 676.0
CMS1_k127_5523119_5 diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012 556.0
CMS1_k127_5523119_6 Sulfite exporter TauE/SafE K07090 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002484 411.0
CMS1_k127_5523119_7 MOSC domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001335 402.0
CMS1_k127_5523119_8 - K07112 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003135 319.0
CMS1_k127_5523119_9 - K07112 - - 0.000000000000000000000000000000000000000000000000000000001432 207.0
CMS1_k127_5532601_0 Exopolysaccharide biosynthesis protein YbjH - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001671 257.0
CMS1_k127_5532601_1 Capsule biosynthesis GfcC - - - 0.000000000000000001082 96.0
CMS1_k127_5532601_2 Lipoprotein - GO:0000271,GO:0005975,GO:0005976,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016051,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0045226,GO:0046379,GO:0071704,GO:1901576 - 0.00001293 56.0
CMS1_k127_5537224_0 protein transport across the cell outer membrane K02452 GO:0002790,GO:0006810,GO:0008104,GO:0008150,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0032940,GO:0033036,GO:0042886,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0071702,GO:0071705 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003531 440.0
CMS1_k127_5537224_1 Uncharacterized protein domain (DUF2202) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002489 285.0
CMS1_k127_5537224_2 Type II and III secretion system protein K02453 - - 0.00000000000000000000000009897 108.0
CMS1_k127_5611547_0 PFAM Aldehyde dehydrogenase K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 1.694e-289 890.0
CMS1_k127_5611547_1 Domain of unknown function (DUF4478) K06966 - 3.2.2.10 1.522e-288 887.0
CMS1_k127_5611547_2 Belongs to the DEAD box helicase family K05590 - 3.6.4.13 3.83e-252 779.0
CMS1_k127_5611547_3 AI-2E family transporter - - - 2.078e-202 633.0
CMS1_k127_5611547_4 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002595 584.0
CMS1_k127_5611547_5 Etoposide-induced protein 2.4 (EI24) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002006 457.0
CMS1_k127_5611547_6 HDOD domain - - - 0.00000000000000001172 82.0
CMS1_k127_5637243_0 PFAM Peptidase family M48 K06013 - 3.4.24.84 2.085e-264 816.0
CMS1_k127_5637243_1 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 4.054e-215 669.0
CMS1_k127_5637243_2 3'-to-5' exoribonuclease specific for small oligoribonucleotides K13288 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008954 342.0
CMS1_k127_5637243_3 pterin-4-alpha-carbinolamine dehydratase K01724 GO:0003674,GO:0003824,GO:0006066,GO:0006725,GO:0006729,GO:0006732,GO:0006807,GO:0008124,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0016829,GO:0016835,GO:0016836,GO:0017144,GO:0018130,GO:0019438,GO:0019751,GO:0034311,GO:0034312,GO:0034641,GO:0042558,GO:0042559,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046146,GO:0046165,GO:0046173,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 4.2.1.96 0.0000000000000000000000000000000000000000000000000000000000000005178 220.0
CMS1_k127_5637899_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 0.0 1254.0
CMS1_k127_5637899_1 twitching motility protein K02670 - - 4.377e-226 703.0
CMS1_k127_5637899_2 Aminotransferase K00812 - 2.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005657 595.0
CMS1_k127_5637899_3 twitching motility protein PilT K02669 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002643 250.0
CMS1_k127_5654403_0 Putative diguanylate phosphodiesterase - - - 0.0 1278.0
CMS1_k127_5654403_1 Diguanylate cyclase K21021,K21023 - 2.7.7.65 2.447e-295 910.0
CMS1_k127_5654403_10 Belongs to the peptidase S8 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002179 460.0
CMS1_k127_5654403_11 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase K03796 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003288 380.0
CMS1_k127_5654403_12 Predicted membrane protein (DUF2238) K08984 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000141 331.0
CMS1_k127_5654403_13 flagellar protein fliS K02422 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001365 275.0
CMS1_k127_5654403_14 Putative ATP-dependant zinc protease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001162 255.0
CMS1_k127_5654403_15 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000005669 104.0
CMS1_k127_5654403_17 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0008703 43.0
CMS1_k127_5654403_2 Domain of unknown function DUF21 - - - 5.583e-274 846.0
CMS1_k127_5654403_3 Acts as a magnesium transporter K06213 - - 8.924e-262 810.0
CMS1_k127_5654403_4 Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate K08289 - 2.1.2.2 5.101e-250 773.0
CMS1_k127_5654403_5 Succinylglutamate desuccinylase aspartoacylase K06987 - - 1.825e-209 653.0
CMS1_k127_5654403_6 mechanosensitive ion channel - - - 9.457e-199 624.0
CMS1_k127_5654403_7 Belongs to the RimK family K05844 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001819 587.0
CMS1_k127_5654403_8 Prokaryotic glutathione synthetase, N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001452 572.0
CMS1_k127_5654403_9 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes K03089 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002487 551.0
CMS1_k127_5684529_0 DNA helicase K03657 - 3.6.4.12 0.0 1470.0
CMS1_k127_5684529_1 Uncharacterised protein family (UPF0014) K02069 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001111 430.0
CMS1_k127_5684529_2 Spermidine putrescine-binding periplasmic protein K11069 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003585 309.0
CMS1_k127_5684529_3 abc transporter atp-binding protein K02068 GO:0005575,GO:0005623,GO:0005886,GO:0006873,GO:0006875,GO:0006879,GO:0008150,GO:0009987,GO:0016020,GO:0019725,GO:0030003,GO:0042592,GO:0044464,GO:0046916,GO:0048878,GO:0050801,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0065007,GO:0065008,GO:0071944,GO:0098771 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009008 295.0
CMS1_k127_5684529_4 COG2199 FOG GGDEF domain K20966 GO:0007154,GO:0007165,GO:0008150,GO:0009987,GO:0023052,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007 3.1.4.52 0.0000000000000000000001183 110.0
CMS1_k127_5684529_5 Belongs to the thioredoxin family K03671 GO:0003674,GO:0003824,GO:0004791,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009636,GO:0009987,GO:0015035,GO:0015036,GO:0016209,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0016671,GO:0019725,GO:0033554,GO:0034599,GO:0042221,GO:0042592,GO:0044424,GO:0044444,GO:0044464,GO:0045454,GO:0047134,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1990748 - 0.00000000000000000002134 91.0
CMS1_k127_570959_0 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 7.613e-211 659.0
CMS1_k127_570959_1 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001166 397.0
CMS1_k127_570959_2 Outer membrane efflux protein - - - 0.0000000000000000000000000004485 113.0
CMS1_k127_5737902_0 Catalyzes cross-linking of the peptidoglycan cell wall K05515 - 3.4.16.4 0.0 1148.0
CMS1_k127_5737902_1 Belongs to the peptidase S11 family K07258 - 3.4.16.4 4.608e-241 747.0
CMS1_k127_5737902_2 TIGRFAM Cell shape determining protein MreB Mrl K03569 - - 6.806e-221 687.0
CMS1_k127_5737902_3 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 7.633e-218 678.0
CMS1_k127_5737902_4 Acts on the D-isomers of alanine, leucine, aspartate, glutamate, aminobutyrate, norvaline and asparagine. The enzyme transfers an amino group from a substrate D-amino acid to the pyridoxal phosphate cofactor to form pyridoxamine and an alpha- keto acid in the first half-reaction K00824 - 2.6.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005082 545.0
CMS1_k127_5737902_5 Involved in formation and maintenance of cell shape K03570 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001557 503.0
CMS1_k127_5737902_6 Protein of unknown function (DUF493) K09158 - - 0.000000000000000000000000000000000000000000000000000004162 191.0
CMS1_k127_5737902_7 Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins K03571 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0008150,GO:0008360,GO:0016020,GO:0016021,GO:0022603,GO:0022604,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0050789,GO:0050793,GO:0050794,GO:0051128,GO:0065007,GO:0065008,GO:0071944 - 0.00000000000000000000000000003229 123.0
CMS1_k127_5737902_8 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 - 2.3.1.181 0.000000000000000001125 86.0
CMS1_k127_5742782_0 it can initiate unwinding at a nick in the DNA. It binds to the single-stranded DNA and acts in a progressive fashion along the DNA in the 3' to 5' direction K03656 - 3.6.4.12 0.0 1334.0
CMS1_k127_5742782_1 LapD/MoxY periplasmic domain - - - 0.0 1172.0
CMS1_k127_5742782_2 ABC transporter transmembrane region K12541 - - 0.0 1126.0
CMS1_k127_5742782_3 Iron-containing alcohol dehydrogenase K00001 - 1.1.1.1 8.424e-242 750.0
CMS1_k127_5742782_4 Belongs to the ompA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003139 447.0
CMS1_k127_5742782_5 Ribosomal protein L11 methyltransferase (PrmA) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001577 384.0
CMS1_k127_5742782_6 Bacterial transglutaminase-like cysteine proteinase BTLCP - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001375 383.0
CMS1_k127_5742782_7 protein conserved in bacteria - - - 0.00000000904 56.0
CMS1_k127_5765621_0 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate K00147 - 1.2.1.41 1.86e-256 792.0
CMS1_k127_5765621_1 Glutathione S-transferase, C-terminal domain K07393 - 1.8.5.7 8.488e-198 617.0
CMS1_k127_5765621_2 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003893 364.0
CMS1_k127_5765621_3 DNA polymerase III, delta' subunit K02340 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001047 353.0
CMS1_k127_5765621_4 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 - 2.1.1.177 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002596 315.0
CMS1_k127_5765621_5 Belongs to the pirin family K06911 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004419 289.0
CMS1_k127_5765621_6 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.0000000000000000000000000000000000000000000000000000000000000004273 220.0
CMS1_k127_5781748_0 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 2.576e-238 737.0
CMS1_k127_5781748_1 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 3.832e-217 676.0
CMS1_k127_5781748_2 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 1.759e-209 652.0
CMS1_k127_5781748_3 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002193 417.0
CMS1_k127_5781748_4 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 - 3.1.22.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001711 348.0
CMS1_k127_5781748_5 MotA/TolQ/ExbB proton channel family K03562 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003181 254.0
CMS1_k127_5781758_0 ABC transporter K06158 - - 0.0 1107.0
CMS1_k127_5781758_1 COG0607 Rhodanese-related sulfurtransferase - - - 0.00000000000000000000000000000002966 125.0
CMS1_k127_5797885_0 Belongs to the beta-ketoacyl-ACP synthases family K00647,K09458 - 2.3.1.179,2.3.1.41 9.326e-258 795.0
CMS1_k127_5797885_1 Necessary for the introduction of cis unsaturation into fatty acids. Catalyzes the dehydration of (3R)-3-hydroxydecanoyl- ACP to E-(2)-decenoyl-ACP and then its isomerization to Z-(3)- decenoyl-ACP. Can catalyze the dehydratase reaction for beta- hydroxyacyl-ACPs with saturated chain lengths up to 16 0, being most active on intermediate chain length K01716 - 4.2.1.59,5.3.3.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006925 358.0
CMS1_k127_5797885_2 diaminopimelate decarboxylase activity K01586 - 4.1.1.20 0.0000000000000000000000000000000000000000000000000000001925 202.0
CMS1_k127_5797885_3 Urea transporter - - - 0.0000000000000000000000000000000000000000000000005445 198.0
CMS1_k127_5801027_0 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 - 2.7.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002521 574.0
CMS1_k127_5801027_1 Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin K01151 GO:0000726,GO:0003674,GO:0003824,GO:0003906,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008081,GO:0008150,GO:0008152,GO:0008833,GO:0009987,GO:0016787,GO:0016788,GO:0016888,GO:0016893,GO:0033554,GO:0034641,GO:0042578,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360 3.1.21.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001232 562.0
CMS1_k127_5801027_10 PFAM Aminotransferase class I and II - - - 0.0000000000000000000002921 96.0
CMS1_k127_5801027_2 mechanosensitive ion channel K03442 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008396 482.0
CMS1_k127_5801027_3 membrane transporter protein K07090,K11312 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002845 448.0
CMS1_k127_5801027_4 Oxidoreductase NAD-binding domain K00380 - 1.8.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008255 423.0
CMS1_k127_5801027_5 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002828 416.0
CMS1_k127_5801027_6 Phosphoglycerate mutase family K08296 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000041 324.0
CMS1_k127_5801027_7 Belongs to the UPF0234 family K09767 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001736 299.0
CMS1_k127_5801027_9 Belongs to the ompA family K03286 - - 0.0000000000000000000000000000000000000000000000000000000000000000000004371 243.0
CMS1_k127_5813632_0 HemY protein N-terminus K02498 - - 3.782e-228 710.0
CMS1_k127_5813632_1 phospholipase A1 K01058 - 3.1.1.32,3.1.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000392 610.0
CMS1_k127_5813632_3 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 - 2.5.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002698 583.0
CMS1_k127_5813632_4 Exodeoxyribonuclease III xth K01142 - 3.1.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002534 558.0
CMS1_k127_5813632_5 Oxidoreductase FAD-binding domain K00523 - 1.17.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003021 455.0
CMS1_k127_5813632_6 Uroporphyrinogen-III synthase HemD K01719 - 4.2.1.75 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001069 433.0
CMS1_k127_58199_0 Zn-dependent protease with chaperone function - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007544 531.0
CMS1_k127_58199_1 Putative MetA-pathway of phenol degradation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006741 432.0
CMS1_k127_58199_2 Las17-binding protein actin regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005354 387.0
CMS1_k127_58199_3 LemA family K03744 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002374 298.0
CMS1_k127_58199_4 Peptidylprolyl isomerase K03769 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000001225 186.0
CMS1_k127_5841319_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0 1561.0
CMS1_k127_5841319_1 Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA K12297 - 2.1.1.173,2.1.1.264 0.0 1466.0
CMS1_k127_5841319_2 Belongs to the anaerobic coproporphyrinogen-III oxidase family - - - 9.946e-300 921.0
CMS1_k127_5841319_3 TIGRFAM lytic murein transglycosylase K08305 - - 2.794e-245 760.0
CMS1_k127_5841319_4 Predicted permease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005848 433.0
CMS1_k127_5841319_5 DUF218 domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000315 414.0
CMS1_k127_5841319_6 Thioredoxin domain - - - 0.00000000000000000000000000000000000000000000000000000000000000002343 230.0
CMS1_k127_5841319_7 Late competence development protein ComFB - - - 0.0000000000000000000000000000000000000000000000001167 177.0
CMS1_k127_5841319_8 Belongs to the GARS family K01945,K13713 - 6.3.2.6,6.3.4.13 0.00000000000000000000000000000000000000000000007888 168.0
CMS1_k127_5866270_0 Cation transporter/ATPase, N-terminus K01537 - 3.6.3.8 0.0 1509.0
CMS1_k127_5866270_1 Diguanylate cyclase - - - 0.0 1431.0
CMS1_k127_5866270_10 Bacterial extracellular solute-binding protein K02020 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001146 328.0
CMS1_k127_5866270_11 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004064 303.0
CMS1_k127_5866270_12 NYN domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002439 299.0
CMS1_k127_5866270_13 Belongs to the UPF0178 family K09768 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006689 282.0
CMS1_k127_5866270_14 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 - 3.2.2.23,4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000000004016 254.0
CMS1_k127_5866270_15 - - - - 0.00000000000000000000000000000000000000000000000000000000000000002368 227.0
CMS1_k127_5866270_16 Phosphate-starvation-inducible E - - - 0.00000000000000000000000000000000000000000000000000006717 192.0
CMS1_k127_5866270_17 Protein of unknown function (DUF2789) - - - 0.00000000000000000000000000000000005888 134.0
CMS1_k127_5866270_18 Nitroreductase family - - - 0.000000000000000000000518 101.0
CMS1_k127_5866270_2 Acetyltransferase (GNAT) domain - - - 0.0 1102.0
CMS1_k127_5866270_3 diguanylate cyclase - - - 4.852e-310 968.0
CMS1_k127_5866270_4 DEAD-box RNA helicase involved in ribosome assembly. Has RNA-dependent ATPase activity and unwinds double-stranded RNA K11927 - 3.6.4.13 1.159e-265 821.0
CMS1_k127_5866270_5 Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system K02017 - 3.6.3.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005005 563.0
CMS1_k127_5866270_6 S1 domain K00243 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001821 534.0
CMS1_k127_5866270_7 ABC transporter, phosphonate, periplasmic substrate-binding protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003188 454.0
CMS1_k127_5866270_8 Binding-protein-dependent transport system inner membrane component K02018 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006281 416.0
CMS1_k127_5866270_9 Specifically methylates the guanine in position 966 of 16S rRNA in the assembled 30S particle K08316 - 2.1.1.171 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003458 378.0
CMS1_k127_5895942_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 0.0 1895.0
CMS1_k127_5895942_1 efflux transmembrane transporter activity K12340,K12538 - - 6.222e-222 695.0
CMS1_k127_5895942_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000148 301.0
CMS1_k127_5895942_3 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.000000000000000000000000000000000000000000000000002432 184.0
CMS1_k127_5895942_4 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K18306 - - 0.000000000000000000000000000000000000000000001526 179.0
CMS1_k127_5918763_0 Belongs to the peptidase S16 family K04770 - - 0.0 1478.0
CMS1_k127_5918763_1 DNA internalization-related competence protein ComEC Rec2 K02238 - - 0.0 1445.0
CMS1_k127_5918763_2 Ammonium Transporter Family K03320 - - 2.946e-259 800.0
CMS1_k127_5918763_3 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 5.854e-213 664.0
CMS1_k127_5918763_4 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001075 493.0
CMS1_k127_5918763_5 Catalyzes the alpha,beta-elimination reaction of D- cysteine and of several D-cysteine derivatives. It could be a defense mechanism against D-cysteine K01505,K05396 - 3.5.99.7,4.4.1.15 0.000000000000000000000000000000000000000000000000000000000000005045 218.0
CMS1_k127_5918763_6 protein conserved in bacteria K09928 - - 0.000000000000000000000000000000000000000000000003328 178.0
CMS1_k127_5918763_7 'Cold-shock' DNA-binding domain K03704 - - 0.00000000000000000000000000000000000001982 143.0
CMS1_k127_5918763_8 Belongs to the UPF0434 family K09791 - - 0.00000000000000000000000000000001423 126.0
CMS1_k127_5953307_0 AsmA family K07289 - - 0.0 1249.0
CMS1_k127_5953307_1 Beta-Casp domain K07576 - - 9.751e-250 773.0
CMS1_k127_5953307_2 Involved in the biosynthesis of porphyrin-containing compound - - - 1.152e-232 722.0
CMS1_k127_5953307_3 Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA K03439 - 2.1.1.33 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003205 401.0
CMS1_k127_597535_0 TIGRFAM penicillin-binding protein, 1A K05366 - 2.4.1.129,3.4.16.4 0.0 1480.0
CMS1_k127_597535_1 PFAM Fructosamine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002249 546.0
CMS1_k127_597535_10 Beta-Casp domain K07576 - - 0.0000000000000000001233 88.0
CMS1_k127_597535_2 PFAM YicC-like family, N-terminal region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002715 492.0
CMS1_k127_597535_3 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001838 481.0
CMS1_k127_597535_4 fatty acid desaturase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001305 439.0
CMS1_k127_597535_5 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002224 402.0
CMS1_k127_597535_6 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 - 3.6.1.66 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001436 398.0
CMS1_k127_597535_7 - - - - 0.00000000000000000000000000000000000000000000000005239 181.0
CMS1_k127_597535_8 Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000000000000000000000000001292 177.0
CMS1_k127_5978896_0 Belongs to the ATCase OTCase family K00609 GO:0003674,GO:0003824,GO:0004070,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016741,GO:0016743,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.3.2 8.465e-210 654.0
CMS1_k127_5978896_1 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 2.107e-194 609.0
CMS1_k127_5978896_2 Belongs to the UPF0301 (AlgH) family K07735 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002058 370.0
CMS1_k127_5978896_3 Phosphoribosyl transferase domain K02825 - 2.4.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007197 321.0
CMS1_k127_5978896_4 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003828 265.0
CMS1_k127_5978896_5 TIGRFAM dihydroorotase, multifunctional complex type K01465 - 3.5.2.3 0.000000000000000000000000000000000000000000359 158.0
CMS1_k127_5978896_6 Belongs to the prokaryotic GSH synthase family K01920 - 6.3.2.3 0.00000000000000005448 80.0
CMS1_k127_6000242_0 Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00163 - 1.2.4.1 0.0 1794.0
CMS1_k127_6000242_1 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455 - - 0.0 1185.0
CMS1_k127_6000242_10 NUDIX domain K08311 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006628 352.0
CMS1_k127_6000242_11 Low-potential electron donor to a number of redox enzymes K03839,K03840 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000231 349.0
CMS1_k127_6000242_12 - - - - 0.000000000000000000000000001016 113.0
CMS1_k127_6000242_2 PFAM CheW domain protein - - - 0.0 1175.0
CMS1_k127_6000242_3 Pyridine nucleotide-disulphide oxidoreductase, dimerisation K00382 - 1.8.1.4 1.597e-256 802.0
CMS1_k127_6000242_4 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002558 588.0
CMS1_k127_6000242_5 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00627 - 2.3.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004942 567.0
CMS1_k127_6000242_6 Belongs to the NadC ModD family K00767 - 2.4.2.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003654 522.0
CMS1_k127_6000242_7 Belongs to the multicopper oxidase YfiH RL5 family K05810 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005076 465.0
CMS1_k127_6000242_8 HAD-superfamily subfamily IB hydrolase, TIGR01490 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002855 408.0
CMS1_k127_6000242_9 N-acetylmuramoyl-L-alanine amidase K03806 - 3.5.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002051 364.0
CMS1_k127_6040271_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 0.0 1171.0
CMS1_k127_6040271_1 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 0.0 1025.0
CMS1_k127_6040271_10 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.000000000000000000000000000000000000000000000000000000000000001479 218.0
CMS1_k127_6040271_11 - - - - 0.0000000000000000000000000000000000000000000004195 168.0
CMS1_k127_6040271_2 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 8.15e-322 986.0
CMS1_k127_6040271_3 Belongs to the peptidase S1C family K04771 - 3.4.21.107 7.241e-277 855.0
CMS1_k127_6040271_4 Belongs to the GcvT family K06980 - - 1.338e-220 686.0
CMS1_k127_6040271_5 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 6.927e-195 612.0
CMS1_k127_6040271_6 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003448 512.0
CMS1_k127_6040271_7 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 - 3.1.26.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006618 454.0
CMS1_k127_6040271_8 Two component signalling adaptor domain K03408 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004082 342.0
CMS1_k127_6040271_9 PFAM Positive regulator of sigma(E), RseC MucC K03803 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001337 289.0
CMS1_k127_6043314_0 Anthranilate synthase component I K01657,K01665 - 2.6.1.85,4.1.3.27 2.425e-282 870.0
CMS1_k127_6043314_1 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 5.364e-253 782.0
CMS1_k127_6043314_10 Hydrolase, TatD family K03424 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007369 503.0
CMS1_k127_6043314_11 reductase K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001992 459.0
CMS1_k127_6043314_12 Maf-like protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004086 397.0
CMS1_k127_6043314_13 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E K01091 - 3.1.3.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003824 394.0
CMS1_k127_6043314_14 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 - 2.7.4.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004335 370.0
CMS1_k127_6043314_15 Uncharacterized ACR, COG1399 K07040 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003025 339.0
CMS1_k127_6043314_16 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.00000000000000000000000000000000000001816 144.0
CMS1_k127_6043314_17 Belongs to the bacterial ribosomal protein bL32 family K02911 GO:0000027,GO:0000302,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006950,GO:0006979,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009628,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042221,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0050896,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1901700,GO:1990904 - 0.0000000000000000000000000000002011 123.0
CMS1_k127_6043314_2 TIGRFAM DNA polymerase III, delta K02341 - 2.7.7.7 6.174e-220 684.0
CMS1_k127_6043314_3 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 2.812e-210 655.0
CMS1_k127_6043314_4 Responsible for synthesis of pseudouridine from uracil K06179 - 5.4.99.24 5.316e-205 638.0
CMS1_k127_6043314_5 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 1.984e-203 634.0
CMS1_k127_6043314_6 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 2.244e-197 617.0
CMS1_k127_6043314_7 malonyl CoA-acyl carrier protein transacylase K00645 - 2.3.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001175 568.0
CMS1_k127_6043314_8 ABC transporter transmembrane region K06148 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000121 567.0
CMS1_k127_6043314_9 PFAM Aminotransferase, class IV K02619 - 4.1.3.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007271 539.0
CMS1_k127_6074439_0 DNA polymerase K03502 - - 4.051e-274 846.0
CMS1_k127_6074439_1 S-adenosylmethionine-dependent methyltransferase K06969 - 2.1.1.191 1.469e-257 795.0
CMS1_k127_6074439_2 - - - - 1.088e-209 653.0
CMS1_k127_6074439_3 Belongs to the peptidase S24 family K03503 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004922 367.0
CMS1_k127_6074439_4 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000007565 258.0
CMS1_k127_6074439_5 sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial K00696 - 2.4.1.14 0.000000000008185 66.0
CMS1_k127_6140307_0 Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls K01439 - 3.5.1.18 1.161e-235 730.0
CMS1_k127_6140307_1 Belongs to the ArsC family - - - 0.000000000000000000000000000000000000000000000000000001294 192.0
CMS1_k127_6149609_0 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 - - 3.157e-211 658.0
CMS1_k127_6149609_1 Thioredoxin K03671,K05838 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000235 551.0
CMS1_k127_6149609_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001972 531.0
CMS1_k127_6149609_3 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008437 494.0
CMS1_k127_6149609_4 Protein of unknown function (DUF1415) K09941 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005239 359.0
CMS1_k127_6149609_5 Prokaryotic cytochrome b561 K12262 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007293 340.0
CMS1_k127_6149609_6 cell redox homeostasis K03671 - - 0.000000000000000000000000004723 111.0
CMS1_k127_6158171_0 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 1.5e-323 991.0
CMS1_k127_6158171_1 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 7.473e-297 913.0
CMS1_k127_6158171_2 Metallo-beta-lactamase superfamily - - - 5.03e-199 621.0
CMS1_k127_6158171_3 phosphoserine phosphatase K01079 - 3.1.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004723 518.0
CMS1_k127_6158171_4 Cobalt uptake substrate-specific transmembrane region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003428 360.0
CMS1_k127_6158171_5 energy transducer activity K03832,K07261 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000155 305.0
CMS1_k127_6158171_6 Fe-S metabolism associated domain K02426 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001472 278.0
CMS1_k127_6158171_7 Biopolymer transport K03561 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008150,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0017038,GO:0031224,GO:0031226,GO:0033036,GO:0042886,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002547 258.0
CMS1_k127_6158171_8 membrane protein domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000543 255.0
CMS1_k127_6158171_9 biopolymer transport protein K03559 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000001517 220.0
CMS1_k127_6185435_0 Catalyzes the interconversion between ADP-D-glycero- beta-D-manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose K03274 - 5.1.3.20 1.179e-209 651.0
CMS1_k127_6185435_1 TIGRFAM lipopolysaccharide heptosyltransferase I K02841 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008407 587.0
CMS1_k127_6185435_2 membrane-associated metal-dependent hydrolase K19353 GO:0000271,GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0005975,GO:0005976,GO:0006629,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0009058,GO:0009059,GO:0009103,GO:0009244,GO:0009311,GO:0009312,GO:0009987,GO:0016020,GO:0016051,GO:0016740,GO:0016772,GO:0016776,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044464,GO:0046401,GO:0071704,GO:0071944,GO:1901135,GO:1901137,GO:1901576,GO:1903509 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003076 507.0
CMS1_k127_6185435_3 Recycling of diacylglycerol produced during the turnover of membrane phospholipid K00901 - 2.7.1.107 0.0000000000000000000000000000000000000000000000000003589 186.0
CMS1_k127_6194313_1 Belongs to the Glu Leu Phe Val dehydrogenases family K00262 - 1.4.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006774 364.0
CMS1_k127_6194313_2 Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene K03664 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0070930,GO:0071704,GO:0097159,GO:1901363,GO:1901564 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002856 315.0
CMS1_k127_6194313_3 Polyketide cyclase dehydrase and lipid transport - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008615 278.0
CMS1_k127_6194313_4 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K06186 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004449 253.0
CMS1_k127_6194313_5 Belongs to the UPF0125 (RnfH) family K09801 - - 0.00000000000000000000000000000000000001931 145.0
CMS1_k127_6215606_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 0.0 1420.0
CMS1_k127_6215606_1 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 - 2.3.1.1,2.3.1.35 8.843e-245 758.0
CMS1_k127_6215606_2 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 2.837e-217 677.0
CMS1_k127_6215606_3 Putative diguanylate phosphodiesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003125 586.0
CMS1_k127_6215606_4 Belongs to the Nudix hydrolase family K03574 - 3.6.1.55 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002866 527.0
CMS1_k127_6215606_5 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 - 2.7.1.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000136 291.0
CMS1_k127_6279213_0 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03106 - 3.6.5.4 4.796e-279 860.0
CMS1_k127_6279213_1 Tyrosine recombinase XerD K04763 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001914 574.0
CMS1_k127_6279213_2 Belongs to the RNA methyltransferase TrmD family K00554 - 2.1.1.228 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004052 455.0
CMS1_k127_6279213_3 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process K03981 - 5.3.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001917 419.0
CMS1_k127_6279213_4 SH3 domain protein K07184 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006384 414.0
CMS1_k127_6279213_5 PFAM Cytochrome c assembly protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003406 395.0
CMS1_k127_6279213_6 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070180,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000005406 223.0
CMS1_k127_6279213_7 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.0000000000000000000000000000000000000000000000000000000000001027 217.0
CMS1_k127_6279213_8 Belongs to the bacterial ribosomal protein bS16 family K02959 - - 0.000000000000000000000000000000000000000000612 158.0
CMS1_k127_6282039_0 Belongs to the citrate synthase family K01647 - 2.3.3.1 9.11e-255 786.0
CMS1_k127_6282039_1 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 2.347e-213 664.0
CMS1_k127_6282039_2 Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling K09001 - 2.7.1.170 2.69e-205 642.0
CMS1_k127_6282039_3 Glutathione S-transferase, C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001131 410.0
CMS1_k127_6282039_4 peptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001579 354.0
CMS1_k127_6282039_5 Iron--sulfur cluster insertion protein erpA K15724 - - 0.0000000000000000000000000000000000000000000000000000000000000001267 222.0
CMS1_k127_6282039_6 Putative diguanylate phosphodiesterase - - - 0.00000000000000000000000000000000000000000000000000000000009405 204.0
CMS1_k127_6282039_7 Putative diguanylate phosphodiesterase - - - 0.000000000000000000000000003972 112.0
CMS1_k127_667907_0 Oxidizes proline to glutamate for use as a carbon and nitrogen source K13821 - 1.2.1.88,1.5.5.2 0.0 1169.0
CMS1_k127_667907_1 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K03307,K11928 - - 3.049e-265 823.0
CMS1_k127_667907_2 Transposase, Mutator family - - - 0.0001475 44.0
CMS1_k127_768764_0 glycyl-tRNA synthetase, alpha subunit K01878 - 6.1.1.14 7.439e-208 646.0
CMS1_k127_768764_1 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009478 531.0
CMS1_k127_768764_2 peptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006211 363.0
CMS1_k127_768764_3 Belongs to the sulfur carrier protein TusA family K04085 - - 0.00000000000000000000000000000000007967 136.0
CMS1_k127_791_0 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.0 1033.0
CMS1_k127_791_1 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U20 and U20a in tRNAs K05539 - - 1.561e-219 682.0
CMS1_k127_791_2 arsenate reductase K00537 - 1.20.4.1 0.000000000000000000000000000000000000000000000000000000009514 199.0
CMS1_k127_791_3 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.000000000000000000000001262 105.0
CMS1_k127_828507_0 The M ring may be actively involved in energy transduction K02409 - - 0.0 1027.0
CMS1_k127_828507_1 PFAM response regulator receiver K10943 - - 6.786e-275 849.0
CMS1_k127_828507_10 Flagellar hook-basal body complex protein FliE K02408 - - 0.00000000000000000000000000000000000000000000000000008695 190.0
CMS1_k127_828507_2 TIGRFAM ATPase, FliI YscN family K02412 - 3.6.3.14 1.408e-273 844.0
CMS1_k127_828507_3 PAS domain K10942 - 2.7.13.3 8.989e-227 704.0
CMS1_k127_828507_4 FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation K02410 - - 1.915e-207 646.0
CMS1_k127_828507_5 Sigma-54 interaction domain K10941 - - 9.144e-201 629.0
CMS1_k127_828507_6 Flagellar hook-length control protein K02414 - - 1.675e-197 632.0
CMS1_k127_828507_7 Flagellar assembly protein FliH K02411 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004366 424.0
CMS1_k127_828507_8 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001642 357.0
CMS1_k127_828507_9 flagellar export protein FliJ K02413 - - 0.0000000000000000000000000000000000000000000000000000000000000005475 222.0
CMS1_k127_840300_0 ABC transporter K09817 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000707 560.0
CMS1_k127_840300_1 ABC 3 transport family K02075,K09816 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004027 465.0
CMS1_k127_840300_2 ABC-type Zn2 transport system, periplasmic component surface adhesin K09815 - - 0.00000000000000000000000000000000000000000000000000000333 192.0
CMS1_k127_855016_0 PFAM multicopper oxidase, type 1 multicopper oxidase, type 2 multicopper oxidase, type 3 K08100 - 1.3.3.5 1.331e-313 963.0
CMS1_k127_855016_1 PQQ-dependent catabolism-associated beta-propeller protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001613 582.0
CMS1_k127_855016_2 Copper resistance protein B precursor (CopB) K07233 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009645 434.0
CMS1_k127_855016_3 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001109 381.0
CMS1_k127_855016_4 Multicopper oxidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002558 344.0
CMS1_k127_855016_5 Cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001564 284.0
CMS1_k127_855016_6 - K09004 - - 0.00000000000000000000000000000000000000000000000000000000000000000004894 232.0
CMS1_k127_855016_7 Domain of unknown function DUF302 - - - 0.00000000000000000000000000000000000000000000000000000000001356 208.0
CMS1_k127_855016_8 membrane protein (DUF2078) K08982 - - 0.000000000000000000001251 96.0
CMS1_k127_869771_0 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001314 567.0
CMS1_k127_869771_1 CorA-like Mg2+ transporter protein K16074 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001874 551.0
CMS1_k127_869771_2 Mechanosensitive ion channel - - - 0.0000000000000000000000000000000000147 136.0
CMS1_k127_889944_0 His Kinase A (phosphoacceptor) domain - - - 2.681e-295 910.0
CMS1_k127_889944_1 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03092 - - 1.512e-234 727.0
CMS1_k127_889944_2 Gentisate 1,2-dioxygenase - - - 1.027e-202 631.0
CMS1_k127_889944_3 Transcriptional regulatory protein, C terminal K02483 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007685 468.0
CMS1_k127_889944_4 domain, Protein K03112 - - 0.000000000000000000000000000000000000000000000003784 173.0
CMS1_k127_901743_0 Diguanylate cyclase - - - 4.204e-243 755.0
CMS1_k127_901743_1 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001085 486.0
CMS1_k127_90397_0 Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps K04084 - 1.8.1.8 0.0 1238.0
CMS1_k127_90397_1 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 9.4e-323 990.0
CMS1_k127_90397_2 acetyl-CoA carboxylase, biotin carboxylase K01961 - 6.3.4.14,6.4.1.2 1.388e-296 910.0
CMS1_k127_90397_3 Belongs to the GARS family K01945,K13713 - 6.3.2.6,6.3.4.13 1.284e-235 731.0
CMS1_k127_90397_4 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05540 - - 2.274e-202 631.0
CMS1_k127_90397_5 Methylates ribosomal protein L11 K02687 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009554 564.0
CMS1_k127_90397_6 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007379 271.0
CMS1_k127_90397_7 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002698 269.0
CMS1_k127_90397_8 protein affecting phage T7 exclusion by the F plasmid K07113 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0016021,GO:0031224,GO:0044425,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006188 269.0
CMS1_k127_90397_9 Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters K03557 - - 0.00000000000000000000000000000000000000001991 153.0
CMS1_k127_912493_0 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.0 1138.0
CMS1_k127_912493_1 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.0 1118.0
CMS1_k127_935538_0 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 7.932e-261 806.0
CMS1_k127_935538_1 Belongs to the 'phage' integrase family. XerC subfamily K03733 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000115 597.0
CMS1_k127_935538_2 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001186 526.0
CMS1_k127_935538_3 Protein of unknown function, DUF484 K09921 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003319 443.0
CMS1_k127_935538_4 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 - 3.4.25.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002441 353.0
CMS1_k127_935538_5 Uncharacterized protein family, UPF0114 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002737 332.0
CMS1_k127_935538_6 Protein of unknown function (DUF971) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000025 256.0
CMS1_k127_949114_0 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 1.116e-239 741.0
CMS1_k127_949114_1 major facilitator superfamily K05820 - - 2.4e-230 715.0
CMS1_k127_949114_2 Acyl-ACP thioesterase K07107 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002607 267.0
CMS1_k127_949114_3 PFAM ATP-binding region, ATPase domain protein domain protein - - - 0.000000000000000000000000005509 121.0
CMS1_k127_949114_4 Bacterial extracellular solute-binding proteins, family 3 - - - 0.00000000000000000002229 100.0
CMS1_k127_973532_0 TIGRFAM The (Largely Gram-negative Bacterial) Hydrophobe Amphiphile Efflux-1 (HAE1) Family K03296,K18138 - - 0.0 1891.0
CMS1_k127_973532_1 Sulfate permease family K03321 - - 7.418e-317 974.0
CMS1_k127_973532_10 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 - 4.3.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003697 443.0
CMS1_k127_973532_11 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001188 426.0
CMS1_k127_973532_12 Catalyzes the phosphorolysis of diverse nucleosides, yielding D-ribose 1-phosphate and the respective free bases. Can use uridine, adenosine, guanosine, cytidine, thymidine, inosine and xanthosine as substrates. Also catalyzes the reverse reactions K09913 - 2.4.2.1,2.4.2.2 0.0000000000000000000000000000000000000000000000000000000000987 204.0
CMS1_k127_973532_13 Peptidase family M23 - - - 0.00000000000000000000000000000000000000000000000000001785 189.0
CMS1_k127_973532_15 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.00000000000000000000000000000000000000003398 152.0
CMS1_k127_973532_16 Protein of unknown function (DUF2798) - - - 0.000000000000000000000000000001444 121.0
CMS1_k127_973532_17 Belongs to the nitrite and sulfite reductase 4Fe-4S domain family K22405 - 1.6.3.4 0.0000000001101 64.0
CMS1_k127_973532_2 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 2.426e-303 931.0
CMS1_k127_973532_3 FecCD transport family K11708 - - 8.474e-262 809.0
CMS1_k127_973532_4 Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA K03215 - 2.1.1.190 6.672e-251 777.0
CMS1_k127_973532_5 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 - 1.1.1.85 1.93e-221 689.0
CMS1_k127_973532_6 COG1108 ABC-type Mn2 Zn2 transport systems permease components K09819,K11606,K11709 GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0009987,GO:0010035,GO:0010038,GO:0010039,GO:0010043,GO:0016020,GO:0042221,GO:0044464,GO:0050896,GO:0051716,GO:0070887,GO:0071241,GO:0071248,GO:0071281,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004968 521.0
CMS1_k127_973532_8 Belongs to the bacterial solute-binding protein 9 family K11707 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000161 499.0
CMS1_k127_973532_9 ABC transporter K11710 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000181 486.0
CMS1_k127_990547_0 Protein of unknown function (DUF502) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005788 381.0
CMS1_k127_990547_1 Domain in cystathionine beta-synthase and other proteins. K04767 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006238 352.0
CMS1_k127_995348_0 outer membrane efflux protein - - - 1.842e-219 689.0
CMS1_k127_995348_2 Dienelactone hydrolase family K07100 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006032 387.0
CMS1_k127_995348_3 Thioredoxin-like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001518 323.0
CMS1_k127_995348_4 Thioredoxin-like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004097 313.0
CMS1_k127_995348_5 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K18901 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001332 262.0
CMS1_k127_995348_6 Phosphoribosyl transferase domain K07100 - - 0.0000000000000000000000000000000000000000000000000000000000000000000004562 243.0
CMS1_k127_995348_7 - - - - 0.00000000000000000000000000000000000000000000000000009611 186.0
CMS1_k127_995348_8 ABC-type antimicrobial peptide transport system, permease component K02004,K05685 - - 0.000000000000000000000000000000000000000000007929 164.0