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Overview

ID MAG00299
Name CMS1_bin.112
Sample SMP0010
Taxonomy
Kingdom Bacteria
Phylum Desulfobacterota
Class Desulfobulbia
Order Desulfobulbales
Family JAGXFP01
Genus JAGXFP01
Species
Assembly information
Completeness (%) 90.93
Contamination (%) 0.7
GC content (%) 52.0
N50 (bp) 10,326
Genome size (bp) 2,785,740

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes2544

Gene name Description KEGG GOs EC E-value Score Sequence
CMS1_k127_1002240_0 PFAM Pyridine nucleotide-disulphide oxidoreductase - - - 0.0 1170.0
CMS1_k127_1002240_1 Belongs to the glutamate synthase family K00265 - 1.4.1.13,1.4.1.14 1.24e-307 948.0
CMS1_k127_1002240_10 Belongs to the P(II) protein family K04751 - - 0.000000000000000000000000000000000000000000000000000002544 193.0
CMS1_k127_1002240_11 Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source - - - 0.00000000000000000000000000000000000000000000000000007934 190.0
CMS1_k127_1002240_12 ABC transporter related - - - 0.0000000000003313 75.0
CMS1_k127_1002240_2 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen K00990 - 2.7.7.59 6.878e-255 811.0
CMS1_k127_1002240_3 Glutamine synthetase, catalytic domain K01915 - 6.3.1.2 4.257e-234 730.0
CMS1_k127_1002240_4 TIGRFAM ammonium transporter K03320 - - 5.096e-200 629.0
CMS1_k127_1002240_5 GAF domain K02584 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001217 616.0
CMS1_k127_1002240_6 Ammonium Transporter Family K03320 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000184 555.0
CMS1_k127_1002240_7 Ribonuclease R winged-helix domain K09720 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001023 382.0
CMS1_k127_1002240_8 Protein tyrosine kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004523 320.0
CMS1_k127_1002240_9 glutamate synthase - - - 0.0000000000000000000000000000000000000000000000000000000000000005846 233.0
CMS1_k127_1022943_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003672 490.0
CMS1_k127_1022943_1 Rhodanese Homology Domain - - - 0.00000000000000000000000000000000000001628 153.0
CMS1_k127_1022943_2 Universal stress protein family - - - 0.0000000000000000000000000000143 120.0
CMS1_k127_1022943_3 Rhodanese Homology Domain - - - 0.000000000000000000000000488 106.0
CMS1_k127_1022943_4 Rhodanese Homology Domain - - - 0.00000000000000000022 89.0
CMS1_k127_1022943_5 Universal stress protein family - - - 0.000000000003547 66.0
CMS1_k127_1028446_0 Belongs to the beta-ketoacyl-ACP synthases family K09458 - 2.3.1.179 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009926 527.0
CMS1_k127_1028446_1 Beta-ketoacyl synthase, C-terminal domain K00647 - 2.3.1.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005068 515.0
CMS1_k127_1028446_10 - - - - 0.0000000000000000000000000000000000000000000000000001235 190.0
CMS1_k127_1028446_11 Protein of unknown function (DUF998) - - - 0.00000000000000000000000000000000000000000000000001297 186.0
CMS1_k127_1028446_12 MoaE protein - - - 0.00000000000000000000000000000000000000000000001822 173.0
CMS1_k127_1028446_13 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.0000000000000000000000001253 108.0
CMS1_k127_1028446_14 electron transfer activity K05337,K17247 - - 0.000000000000005482 74.0
CMS1_k127_1028446_15 Reverse transcriptase (RNA-dependent DNA polymerase) - - - 0.000000000000273 70.0
CMS1_k127_1028446_16 PFAM Type IV pilus assembly PilZ - - - 0.0000001076 59.0
CMS1_k127_1028446_2 AMP-binding enzyme K01912 - 6.2.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001621 494.0
CMS1_k127_1028446_3 Flavin containing amine oxidoreductase K09516 - 1.3.99.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001002 382.0
CMS1_k127_1028446_4 class II (D K and N) K04568 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003124 326.0
CMS1_k127_1028446_5 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000092 299.0
CMS1_k127_1028446_6 Gram-negative porin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001692 297.0
CMS1_k127_1028446_7 PFAM YsiA-like protein, C-terminal region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002673 269.0
CMS1_k127_1028446_8 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000001269 241.0
CMS1_k127_1028446_9 Phosphate acyltransferases K00655 - 2.3.1.51 0.000000000000000000000000000000000000000000000000000000000000000003835 237.0
CMS1_k127_1079818_0 RNA binding S1 domain protein K06959 - - 6.419e-295 919.0
CMS1_k127_1079818_1 Putative zinc- or iron-chelating domain K06940 - - 0.000000000000000000000000000000000001722 139.0
CMS1_k127_1079818_2 Tetratricopeptide repeat K09527 - - 0.0000000005657 72.0
CMS1_k127_1129028_0 Metallo-beta-lactamase superfamily domain K07576 - - 9.945e-268 828.0
CMS1_k127_1129028_1 nitroreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002329 310.0
CMS1_k127_1129028_2 Transposase IS200 like K07491 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002919 310.0
CMS1_k127_1129028_3 Domain of unknown function (DUF4870) K09940 - - 0.00000000000000000000000000000000000000000000000002816 180.0
CMS1_k127_1129028_4 bacterial-type flagellum-dependent cell motility - - - 0.0000000000007236 79.0
CMS1_k127_1129028_5 Transposase IS200 like - - - 0.000000000009105 68.0
CMS1_k127_1129028_6 SMART Chromosomal replication initiator DnaA domain - - - 0.0000002052 55.0
CMS1_k127_1145988_0 Mechanosensitive ion channel K22044 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001353 462.0
CMS1_k127_1145988_1 Transposase (IS116 IS110 IS902 family) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002065 286.0
CMS1_k127_1145988_2 Protein of unknown function, DUF481 - - - 0.0000000000000000000000000000000000000000000000000000000000000006716 232.0
CMS1_k127_1145988_3 peroxiredoxin activity K01607 - 4.1.1.44 0.0000000000000000000000000000000000000000000000000000002922 196.0
CMS1_k127_1145988_4 COG0526, thiol-disulfide isomerase and thioredoxins - - - 0.000000000000000000000000000000000000000000002363 176.0
CMS1_k127_1145988_5 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05540 - - 0.0000001829 55.0
CMS1_k127_1213445_0 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002256 508.0
CMS1_k127_1213445_1 hydro-lyase, Fe-S type, tartrate fumarate subfamily, alpha subunit K01677 - 4.2.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003697 409.0
CMS1_k127_1213445_10 ISXO2-like transposase domain K07488 - - 0.00000000000000000000006801 105.0
CMS1_k127_1213445_11 - - - - 0.000000000000000002939 88.0
CMS1_k127_1213445_12 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.00001543 51.0
CMS1_k127_1213445_2 transcriptional regulatory protein - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003806 383.0
CMS1_k127_1213445_3 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000226 381.0
CMS1_k127_1213445_4 Hydro-lyase, Fe-S type, tartrate fumarate subfamily, beta subunit K01678 - 4.2.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001411 274.0
CMS1_k127_1213445_5 the current gene model (or a revised gene model) may contain one or more premature stops and or frameshifts - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001611 244.0
CMS1_k127_1213445_6 Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit K02427 - 2.1.1.166 0.0000000000000000000000000000000000000000000000000000000000000001556 226.0
CMS1_k127_1213445_7 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000001298 203.0
CMS1_k127_1213445_8 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 GO:0000725,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008821,GO:0009058,GO:0009059,GO:0009987,GO:0016787,GO:0016788,GO:0016889,GO:0016894,GO:0031297,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0045005,GO:0046483,GO:0048476,GO:0050896,GO:0051716,GO:0071704,GO:0071932,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901576 3.1.22.4 0.0000000000000000000000000000000000000000000000000000001005 199.0
CMS1_k127_1213445_9 Domain in cystathionine beta-synthase and other proteins. - - - 0.000000000000000000000000000000000000000000000004346 176.0
CMS1_k127_1238341_0 PFAM peptidase S8 and S53, subtilisin, kexin, sedolisin K01342,K14645 - 3.4.21.62 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003862 418.0
CMS1_k127_1238341_3 PFAM UvrB UvrC protein - - - 0.000000000000000000000000000000000000000000003038 177.0
CMS1_k127_1238341_4 - - - - 0.000000000000000001104 93.0
CMS1_k127_1241742_0 NapC/NirT cytochrome c family, N-terminal region - GO:0003674,GO:0003824,GO:0005575,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009061,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016491,GO:0022900,GO:0031224,GO:0044237,GO:0044425,GO:0045333,GO:0055114 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001559 589.0
CMS1_k127_1241742_1 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004656 422.0
CMS1_k127_1241742_2 Outer membrane lipoprotein-sorting protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001894 287.0
CMS1_k127_1241742_3 PFAM TrkA-N domain K10716 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000118 284.0
CMS1_k127_1241742_4 helix_turn_helix, mercury resistance K13640 - - 0.000000000000000000000000000000000000000001518 159.0
CMS1_k127_1241742_5 - - - - 0.00000000000000000002746 96.0
CMS1_k127_1298434_0 domain, Protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001166 563.0
CMS1_k127_1298434_1 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001404 473.0
CMS1_k127_1298434_2 PFAM Cobyrinic acid ac-diamide synthase K07321 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001017 363.0
CMS1_k127_1298434_3 Part of the ABC transporter FtsEX involved in cellular division K09811 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002732 309.0
CMS1_k127_1298434_4 PFAM ABC transporter K09812 - - 0.000000000000000000000000000000000000000000000000000000000000000008569 235.0
CMS1_k127_1298434_5 PFAM peptidase K21471 - - 0.0000000000000000000000000000000000000000000000000000000002759 218.0
CMS1_k127_1298434_6 PFAM SMP-30 Gluconolaconase K20952 - - 0.0000000000000000000000000000000000000004042 160.0
CMS1_k127_1298434_7 Belongs to the TPP enzyme family - - - 0.000000000000000000000002351 120.0
CMS1_k127_1298434_8 Phage integrase, N-terminal SAM-like domain - - - 0.0000000006684 64.0
CMS1_k127_1307747_0 Protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004704 482.0
CMS1_k127_1307747_1 AP2 domain - - - 0.00000000000000000000000000000000000000000000000000000000374 203.0
CMS1_k127_1307747_3 Domain of unknown function (DUF4388) - - - 0.00000000000000000000000000000000000003553 160.0
CMS1_k127_1307747_4 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000001943 126.0
CMS1_k127_1307747_5 Peptidase C26 K07010 - - 0.000000006939 58.0
CMS1_k127_1332691_0 Protein of unknown function (DUF1009) K09949 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008187 373.0
CMS1_k127_1332691_1 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005947 364.0
CMS1_k127_1332691_2 type II secretion system K02653 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002966 337.0
CMS1_k127_1332691_3 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 GO:0003674,GO:0003824,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016740,GO:0016746,GO:0016747,GO:0019637,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.3.1.191 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008508 327.0
CMS1_k127_1332691_4 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001199 314.0
CMS1_k127_1332691_5 PFAM aminoglycoside phosphotransferase K07102 - 2.7.1.221 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004128 282.0
CMS1_k127_1332691_6 Nucleotidyl transferase K00966 - 2.7.7.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000001184 270.0
CMS1_k127_1332691_7 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 - 4.2.1.59 0.0000000000000000000000000000000000000000000000000003626 189.0
CMS1_k127_1332691_8 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K04764 - - 0.00000000000000000000000000000000000001009 146.0
CMS1_k127_134324_0 Belongs to the methyltransferase superfamily K07444,K12297 - 2.1.1.173,2.1.1.264 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001314 454.0
CMS1_k127_134324_1 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004984 394.0
CMS1_k127_134324_10 PFAM Formylglycine-generating sulfatase enzyme - - - 0.00000000000000000000000000000000000000000000000000000000166 214.0
CMS1_k127_134324_11 phosphorelay signal transduction system - - - 0.0000000000000000000000000000000000000000000000000000001296 209.0
CMS1_k127_134324_12 3'-5' exonuclease - - - 0.000000000000000000000000000000000000000000000000000001129 198.0
CMS1_k127_134324_14 Cellulose biosynthesis protein BcsQ K03496 - - 0.000000000000000000000000000000000000000000000000000227 200.0
CMS1_k127_134324_15 FKBP-type peptidyl-prolyl cis-trans isomerase K01802,K03772 - 5.2.1.8 0.000000000000000000000000000000000000000000009984 167.0
CMS1_k127_134324_16 Histidine kinase - - - 0.000000000000000000000000000000000000001712 168.0
CMS1_k127_134324_17 Nucleotide pyrophosphohydrolase - - - 0.00000000000000000000000000000006594 126.0
CMS1_k127_134324_18 Diphthamide synthase - - - 0.0000000000000000000000000000001252 126.0
CMS1_k127_134324_2 PFAM Phosphotransferase enzyme family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006258 366.0
CMS1_k127_134324_20 PFAM Biopolymer transport protein ExbD TolR K03559 - - 0.000000000000000000000000000002072 124.0
CMS1_k127_134324_21 Gram-negative bacterial TonB protein C-terminal K03832 - - 0.00000000000000000000000000003503 125.0
CMS1_k127_134324_22 transcriptional regulator containing an HTH domain fused to a Zn-ribbon K07743 - - 0.00000000000000000000001457 102.0
CMS1_k127_134324_3 AAA domain (Cdc48 subfamily) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001116 346.0
CMS1_k127_134324_4 PFAM periplasmic binding protein K02016 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001691 304.0
CMS1_k127_134324_5 PFAM ABC transporter related K02013 - 3.6.3.34 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002579 302.0
CMS1_k127_134324_6 PFAM MotA TolQ ExbB proton channel K03561 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001373 259.0
CMS1_k127_134324_7 Belongs to the BI1 family K06890,K19416 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006346 256.0
CMS1_k127_134324_8 Inositol monophosphatase family K01092 - 3.1.3.25 0.000000000000000000000000000000000000000000000000000000000000000000000002127 253.0
CMS1_k127_134324_9 Signal transduction histidine kinase, nitrogen specific, NtrB K07708 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000001636 230.0
CMS1_k127_1360506_0 Sodium/hydrogen exchanger family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001313 464.0
CMS1_k127_1360506_1 Lysine-2,3-aminomutase K01843 - 5.4.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003434 458.0
CMS1_k127_1360506_2 Universal stress protein family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003066 353.0
CMS1_k127_1360506_3 PFAM malic K00027,K00029 - 1.1.1.38,1.1.1.40 0.00000000000000005504 82.0
CMS1_k127_1360506_4 PFAM transglutaminase domain protein - - - 0.00000000002897 70.0
CMS1_k127_1373593_0 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002014 625.0
CMS1_k127_1373593_1 Hemerythrin HHE cation binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005964 451.0
CMS1_k127_1373593_2 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000111 427.0
CMS1_k127_1373593_3 HflC and HflK could encode or regulate a protease K04088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001953 428.0
CMS1_k127_1373593_4 HflC and HflK could regulate a protease K04087 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002146 402.0
CMS1_k127_1373593_5 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.000000000000000000000000000000000000000000000000000000000000000000000000000002887 269.0
CMS1_k127_1373593_6 Rhomboid family - - - 0.00000000000000000000000000000000000000000000000000005861 198.0
CMS1_k127_1373593_7 SET domain K07117 - - 0.00000000000000000001111 97.0
CMS1_k127_1373593_9 COG2940 Proteins containing SET domain K07117 - - 0.0000026 52.0
CMS1_k127_1397874_0 Penicillin-binding Protein dimerisation domain K05515 - 3.4.16.4 3.488e-201 642.0
CMS1_k127_1397874_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333,K13378,K13380 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0016020,GO:0044424,GO:0044464,GO:0071944 1.6.5.3 3.585e-196 617.0
CMS1_k127_1397874_10 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 K00339 - 1.6.5.3 0.000000000000000000000000000001505 123.0
CMS1_k127_1397874_12 - - - - 0.0000000000000004256 80.0
CMS1_k127_1397874_13 - - - - 0.00000007278 55.0
CMS1_k127_1397874_2 Belongs to the MurCDEF family K02558 - 6.3.2.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002075 585.0
CMS1_k127_1397874_3 TIGRFAM cell shape determining protein, MreB Mrl family K03569 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008179 576.0
CMS1_k127_1397874_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008861 433.0
CMS1_k127_1397874_5 Involved in formation and maintenance of cell shape K03570 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000091 294.0
CMS1_k127_1397874_6 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001336 284.0
CMS1_k127_1397874_7 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338,K05580 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000003452 208.0
CMS1_k127_1397874_8 Respiratory-chain NADH dehydrogenase, 30 Kd subunit K00332 - 1.6.5.3 0.00000000000000000000000000000000000000000000000006061 184.0
CMS1_k127_1397874_9 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00330 - 1.6.5.3 0.0000000000000000000000000000000000000000000000005707 179.0
CMS1_k127_1420263_0 PFAM malic K00027,K00029 - 1.1.1.38,1.1.1.40 2.464e-250 782.0
CMS1_k127_1420263_1 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007982 482.0
CMS1_k127_1420263_2 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002063 317.0
CMS1_k127_1420263_3 Sulfite exporter TauE/SafE K07090 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003656 258.0
CMS1_k127_1420263_4 phosphorelay sensor kinase activity K03406 - - 0.000000000000000000000000000000000000000000001105 173.0
CMS1_k127_1420263_5 Protein of unknown function (DUF3024) - - - 0.000000000000000000000000000000000000000002158 158.0
CMS1_k127_1420263_7 TIGRFAM succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240,K00245 - 1.3.5.1,1.3.5.4 0.000000000000002608 75.0
CMS1_k127_1420263_8 E1-E2 ATPase K17686,K19597 - 3.6.3.54 0.00000052 57.0
CMS1_k127_1420263_9 E1-E2 ATPase K17686 - 3.6.3.54 0.0001961 51.0
CMS1_k127_1461608_0 Von Willebrand factor type A K02448 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003424 464.0
CMS1_k127_1461608_1 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001663 314.0
CMS1_k127_1461608_2 4 iron, 4 sulfur cluster binding - - - 0.000000000000000000000000000000000000000000000000000000000000006233 227.0
CMS1_k127_1461608_3 helix_turn_helix, arabinose operon control protein - - - 0.0000000000000000000000000000000000000000000000000002593 192.0
CMS1_k127_1461608_4 GGDEF domain - - - 0.00000000000000000000000000000000000000000000000002846 191.0
CMS1_k127_1461608_5 HD domain - - - 0.000000000000000000000000000000000000000000000002248 183.0
CMS1_k127_1461608_6 - - - - 0.000000000000000000000000004814 114.0
CMS1_k127_1461608_7 COG NOG22668 non supervised orthologous group - - - 0.0000000000000000000002898 108.0
CMS1_k127_1462216_0 permease YjgP YjgQ family K11720 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008317 357.0
CMS1_k127_1462216_1 4 iron, 4 sulfur cluster binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003033 304.0
CMS1_k127_1462216_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004932 298.0
CMS1_k127_1462216_3 CHASE K02488,K21009 - 2.7.7.65 0.00000000000000000000000000000000000000000000000000000000002093 218.0
CMS1_k127_1462216_4 UPF0313 protein - - - 0.00000000000785 66.0
CMS1_k127_1486950_0 PAS domain containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000001736 228.0
CMS1_k127_1486950_1 Putative Fe-S cluster - - - 0.0000000000000000000000000000000000000000000000000000001496 199.0
CMS1_k127_1486950_2 Belongs to the UPF0312 family - - - 0.000000000000000000000000000000000000000000000000001641 188.0
CMS1_k127_1486950_3 Protein of Unknown function (DUF2784) - - - 0.00000000000000000000000000000000000000001446 156.0
CMS1_k127_1486950_4 Spermine/spermidine synthase domain - - - 0.00000000000000000000000000000000000000001797 155.0
CMS1_k127_1499894_0 Associated with various cellular activities K04748 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003916 425.0
CMS1_k127_1499894_1 TIGRFAM transcriptional regulator, Rrf2 family - - - 0.00000000000000000000000000000000000000000000004299 173.0
CMS1_k127_1513539_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537,K01539 - 3.6.3.8,3.6.3.9 0.0 1232.0
CMS1_k127_1513539_1 Universal stress protein family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005039 362.0
CMS1_k127_1513539_2 Protein of unknown function (DUF3750) - - - 0.00000000000000000002262 90.0
CMS1_k127_1526895_0 Flavodoxin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001349 547.0
CMS1_k127_1526895_1 PFAM NADH flavin oxidoreductase NADH oxidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001379 505.0
CMS1_k127_1526895_10 Iron-storage protein K02217 - 1.16.3.2 0.00000000000000000000000000000000000000000000000000000000000002892 219.0
CMS1_k127_1526895_11 lyase activity - - - 0.000000000000000000000000000000000000000000000000000001165 199.0
CMS1_k127_1526895_12 Rubredoxin - - - 0.0000000000000000000001148 98.0
CMS1_k127_1526895_13 Belongs to the P-Pant transferase superfamily K02362,K06133 - 6.3.2.14 0.000000000000000000001404 104.0
CMS1_k127_1526895_14 Uncharacterized protein conserved in bacteria (DUF2064) K09931 - - 0.000000000000000000002144 101.0
CMS1_k127_1526895_15 PFAM Colicin V production protein K03558 - - 0.00000000214 66.0
CMS1_k127_1526895_16 - - - - 0.000000002533 60.0
CMS1_k127_1526895_17 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.000000006705 57.0
CMS1_k127_1526895_18 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 - 2.7.1.71 0.00000002364 56.0
CMS1_k127_1526895_2 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009141,GO:0009143,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 3.6.1.66 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001474 347.0
CMS1_k127_1526895_3 Oligosaccharyl transferase STT3 subunit K07151 - 2.4.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004776 368.0
CMS1_k127_1526895_4 C-terminal domain of 1-Cys peroxiredoxin K03386,K20011 - 1.11.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001974 298.0
CMS1_k127_1526895_5 PFAM ApbE family K09740 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009956 278.0
CMS1_k127_1526895_6 cyclic nucleotide-binding K01420,K21563 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001234 275.0
CMS1_k127_1526895_7 Domain of unknown function (DUF3786) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002828 264.0
CMS1_k127_1526895_8 PFAM Glycosyl transferase family 2 K09931 - - 0.00000000000000000000000000000000000000000000000000000000000000000007656 238.0
CMS1_k127_1526895_9 Desulfoferrodoxin, ferrous iron-binding K05919 - 1.15.1.2 0.000000000000000000000000000000000000000000000000000000000000003023 219.0
CMS1_k127_1579097_0 AMP-binding enzyme - - - 1.221e-290 921.0
CMS1_k127_1579097_1 MFS/sugar transport protein K06902 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000108 393.0
CMS1_k127_1579097_2 Helix-turn-helix domain - - - 0.000000000000000000000000000000000000000000000000001275 194.0
CMS1_k127_1579097_3 Cupin 2, conserved barrel domain protein - - - 0.0000000000000000000000000000000000000003764 150.0
CMS1_k127_1579097_4 Smr domain - - - 0.0000000000000000000000004197 110.0
CMS1_k127_1579097_5 Class III cytochrome C family - - - 0.000000000000002926 81.0
CMS1_k127_162257_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 GO:0000166,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.1.1.16 2.227e-213 672.0
CMS1_k127_162257_1 Belongs to the MEMO1 family K06990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007468 303.0
CMS1_k127_162257_2 Prokaryotic N-terminal methylation motif K02650 - - 0.0000000000000000000000001932 113.0
CMS1_k127_162562_0 filamentation induced by cAMP protein Fic - - - 2.48e-200 629.0
CMS1_k127_162562_1 Protein of unknown function (DUF3800) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004444 256.0
CMS1_k127_162562_2 phosphoesterases, related to the Icc protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000001353 242.0
CMS1_k127_162562_3 PFAM pyridoxamine 5-phosphate - - - 0.00000000000000000000000000000001475 130.0
CMS1_k127_162562_4 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen - - - 0.0000000000000000005698 88.0
CMS1_k127_162562_5 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen - - - 0.00000000000000001139 85.0
CMS1_k127_162562_6 N-6 DNA Methylase K03427 - 2.1.1.72 0.00007287 49.0
CMS1_k127_1645737_0 HMGL-like K01666 - 4.1.3.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002561 417.0
CMS1_k127_1645737_1 PFAM ABC transporter K06020 - 3.6.3.25 0.0000000000000000000000000000000000000000000000000001282 188.0
CMS1_k127_1645737_2 Aldolase K01625 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 4.1.2.14,4.1.3.42 0.0000000000000000000000000000000000000000000003247 173.0
CMS1_k127_1645737_3 cyclic nucleotide-binding K10914 - - 0.00000000000000000000000000004351 124.0
CMS1_k127_1645737_4 cyclic nucleotide-binding K10914 - - 0.0000000000000000007644 92.0
CMS1_k127_1645737_5 His Kinase A phosphoacceptor domain-containing protein 13 - - - 0.0000000001097 70.0
CMS1_k127_1645737_6 - - - - 0.00001147 57.0
CMS1_k127_1654215_0 Patatin-like phospholipase K07001 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001516 407.0
CMS1_k127_1654215_1 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009659 407.0
CMS1_k127_1676514_0 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962,K01963 - 2.1.3.15,6.4.1.2 0.0 1125.0
CMS1_k127_1676514_1 Pfam:CPSase_L_chain - - - 8.776e-264 816.0
CMS1_k127_1676514_2 ligase activity, forming carbon-carbon bonds - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000121 320.0
CMS1_k127_1676514_3 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001151 319.0
CMS1_k127_1676514_4 biotin-[acetyl-CoA-carboxylase] ligase activity K03524 - 6.3.4.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000964 285.0
CMS1_k127_1676514_5 repeat-containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000001486 222.0
CMS1_k127_1676514_6 gibberellic acid mediated signaling pathway - GO:0001101,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0007154,GO:0007165,GO:0008150,GO:0008194,GO:0008375,GO:0009719,GO:0009725,GO:0009735,GO:0009736,GO:0009739,GO:0009740,GO:0009755,GO:0009937,GO:0009938,GO:0009966,GO:0009968,GO:0009987,GO:0010033,GO:0010476,GO:0010646,GO:0010648,GO:0016262,GO:0016740,GO:0016757,GO:0016758,GO:0019222,GO:0023051,GO:0023052,GO:0023057,GO:0031323,GO:0032870,GO:0033993,GO:0042221,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464,GO:0048519,GO:0048523,GO:0048583,GO:0048585,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007,GO:0070887,GO:0071229,GO:0071310,GO:0071368,GO:0071370,GO:0071396,GO:0071495,GO:0140096,GO:1901700,GO:1901701,GO:2000377 - 0.000000000000000000000000000000000005949 143.0
CMS1_k127_1676514_7 Phospholipid methyltransferase - - - 0.00000000000000000000000000000000002024 140.0
CMS1_k127_1681353_0 FAD dependent oxidoreductase K07137 - - 1.499e-250 782.0
CMS1_k127_1681353_1 Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation K02232 - 6.3.5.10 1.001e-199 646.0
CMS1_k127_1681353_2 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 1.327e-197 623.0
CMS1_k127_1681353_3 Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6- dimethylbenzimidazole (DMB) K00768 GO:0003674,GO:0003824,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008939,GO:0009058,GO:0009110,GO:0009235,GO:0009236,GO:0009987,GO:0016740,GO:0016757,GO:0016763,GO:0017144,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042364,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.4.2.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002031 495.0
CMS1_k127_1681353_4 mechanosensitive ion channel K03442 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001099 400.0
CMS1_k127_1681353_5 Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate K02233 - 2.7.8.26 0.000000000000000000000000000000000000000000000000007476 190.0
CMS1_k127_1681353_6 Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate K02231 - 2.7.1.156,2.7.7.62 0.0000000000000000000000000000000000000000000000002355 181.0
CMS1_k127_1681353_7 Phosphoglycerate mutase family K02226 - 3.1.3.73 0.000000000000000000000000000000000000002538 156.0
CMS1_k127_1688841_0 PFAM multicopper oxidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006322 561.0
CMS1_k127_1688841_2 Transposase and inactivated derivatives IS30 family K07482 - - 0.0001938 48.0
CMS1_k127_1712529_0 Polysaccharide biosynthesis protein CapD - - - 1.191e-250 788.0
CMS1_k127_1712529_1 Sulfatase K19353 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006948 314.0
CMS1_k127_1728479_0 ATP-dependent helicase HrpB K03579 - 3.6.4.13 2.717e-210 667.0
CMS1_k127_1728479_1 PFAM DNA mismatch repair protein MutS, C-terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005992 295.0
CMS1_k127_1742019_0 AMP-binding enzyme K22319 - 6.1.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005513 608.0
CMS1_k127_1742019_1 PFAM 3-Oxoacyl- acyl-carrier-protein (ACP) synthase III K22317 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001907 420.0
CMS1_k127_1742019_2 carboxylic ester hydrolase activity K01563,K22318,K22319 - 3.8.1.5,6.1.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003283 337.0
CMS1_k127_1742019_3 3-beta hydroxysteroid dehydrogenase isomerase K21271,K22320 - 1.1.1.394,1.1.1.412 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000331 292.0
CMS1_k127_1750933_0 - - - - 7.556e-208 664.0
CMS1_k127_1771836_0 DNA polymerase III alpha subunit K02337 - 2.7.7.7 8.271e-207 658.0
CMS1_k127_1771836_1 A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012 355.0
CMS1_k127_1771836_2 ribonuclease BN K07058 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000018 317.0
CMS1_k127_1771836_3 Protein of unknown function, DUF480 K09915 - - 0.000000000000000000000000000000000000000000000000002836 189.0
CMS1_k127_1771836_5 d-alanyl-d-alanine carboxypeptidase K07260 - 3.4.17.14 0.0000000000000000000000000000000000005285 149.0
CMS1_k127_1771836_6 PFAM 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.000000000000000000000000000000002203 129.0
CMS1_k127_1771836_7 - - - - 0.00000000000000000000000000000001633 128.0
CMS1_k127_1771836_9 - - - - 0.0000002242 58.0
CMS1_k127_1785698_0 Methyl-viologen-reducing hydrogenase, delta subunit K16886 - - 0.0 1213.0
CMS1_k127_1785698_1 4Fe-4S dicluster domain K16887 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006001 538.0
CMS1_k127_1785698_2 Sodium:sulfate symporter transmembrane region K14445 - - 0.0000000000000000000000000002346 119.0
CMS1_k127_1785698_3 - - - - 0.0000000007448 61.0
CMS1_k127_179668_0 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis - - - 8.27e-261 814.0
CMS1_k127_179668_1 PFAM Radical SAM domain protein K22227 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000397 606.0
CMS1_k127_179668_10 Psort location Cytoplasmic, score - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002646 366.0
CMS1_k127_179668_11 PFAM TrkA-N domain protein K03499 - - 0.00000000000000000000000000000000000000000000000000000000000000000000005403 246.0
CMS1_k127_179668_12 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.000000000000000000000000000000000000000000007223 169.0
CMS1_k127_179668_2 PFAM aminotransferase class I and II K11358 - 2.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004095 588.0
CMS1_k127_179668_3 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01950 - 6.3.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003042 591.0
CMS1_k127_179668_4 PFAM PhoH-like protein K07175 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009545 572.0
CMS1_k127_179668_5 GGGtGRT protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004679 558.0
CMS1_k127_179668_6 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 GO:0003674,GO:0003824,GO:0004853,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007525 518.0
CMS1_k127_179668_7 PFAM Cation transporter K03498 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001788 484.0
CMS1_k127_179668_8 PFAM Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001086 447.0
CMS1_k127_179668_9 Catalyzes the ferrous insertion into protoporphyrin IX K01772 GO:0003674,GO:0003824,GO:0004325,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.99.1.1,4.99.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002682 381.0
CMS1_k127_1811197_0 Belongs to the IlvD Edd family K01687 - 4.2.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001223 481.0
CMS1_k127_1811197_1 Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000016 503.0
CMS1_k127_1811197_2 3'(2'),5'-bisphosphate nucleotidase activity - - - 0.0000000000000000000000000000000000000000000000003358 182.0
CMS1_k127_183891_0 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 6.204e-202 635.0
CMS1_k127_183891_1 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 6.156e-201 631.0
CMS1_k127_183891_10 TIGRFAM riboflavin synthase, alpha subunit K00793 - 2.5.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003384 316.0
CMS1_k127_183891_11 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004311 251.0
CMS1_k127_183891_12 PFAM CMP dCMP deaminase zinc-binding K01493 - 3.5.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000002967 245.0
CMS1_k127_183891_13 ribose 5-phosphate isomerase B K01808 - 5.3.1.6 0.000000000000000000000000000000000000000000000000000000158 198.0
CMS1_k127_183891_14 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 GO:0000906,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.78 0.0000000000000000000000000000000000000000002736 159.0
CMS1_k127_183891_15 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 GO:0000035,GO:0000036,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016053,GO:0019637,GO:0019752,GO:0019842,GO:0031177,GO:0032787,GO:0033218,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044620,GO:0046394,GO:0046467,GO:0046493,GO:0048037,GO:0051192,GO:0071704,GO:0072330,GO:0072341,GO:0090407,GO:0140104,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 - 0.000000000000000000000000000000006554 129.0
CMS1_k127_183891_16 Belongs to the bacterial ribosomal protein bL32 family K02911 GO:0003674,GO:0003735,GO:0005198 - 0.00000000000000000000002645 100.0
CMS1_k127_183891_2 PFAM Acyl-CoA dehydrogenase K00248 - 1.3.8.1 2.324e-198 623.0
CMS1_k127_183891_3 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005271 586.0
CMS1_k127_183891_4 Electron transfer flavoprotein, alpha subunit K03522 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002326 542.0
CMS1_k127_183891_5 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006234 429.0
CMS1_k127_183891_6 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008085 388.0
CMS1_k127_183891_7 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001389 383.0
CMS1_k127_183891_8 PFAM Electron transfer flavoprotein K03521 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001374 374.0
CMS1_k127_183891_9 Short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001011 367.0
CMS1_k127_1844692_0 PFAM Na Pi-cotransporter K03324 - - 1.315e-221 701.0
CMS1_k127_1844692_1 Predicted membrane protein (DUF2339) - - - 1.814e-215 699.0
CMS1_k127_1844692_2 Protein of unknown function (DUF3999) - - - 0.0000000000000000000000000000000000000000000000000000000007809 219.0
CMS1_k127_1844692_4 Peptidoglycan-binding domain 1 protein K07260 - 3.4.17.14 0.00000000000000000823 91.0
CMS1_k127_1844692_5 Elongator protein 3, MiaB family, Radical SAM - - - 0.00000000000001905 74.0
CMS1_k127_1844692_6 - K06039,K07092 - - 0.000000000002034 72.0
CMS1_k127_1847446_0 D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1 K03841 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005984,GO:0005985,GO:0005986,GO:0005996,GO:0006000,GO:0006002,GO:0006006,GO:0006094,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009058,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019203,GO:0019318,GO:0019319,GO:0019637,GO:0030388,GO:0034637,GO:0042132,GO:0042578,GO:0044237,GO:0044238,GO:0044249,GO:0044262,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046351,GO:0046364,GO:0050308,GO:0071704,GO:1901135,GO:1901576 3.1.3.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004096 510.0
CMS1_k127_1847446_1 PFAM blue (type 1) copper domain protein - - - 0.000000000000000000000000000000000000000003018 161.0
CMS1_k127_1847446_2 UbiE COQ5 methyltransferase - - - 0.000000000000000000000000000000000000000487 152.0
CMS1_k127_1847446_3 DNA-binding transcription factor activity K03892 - - 0.00000000000000000000000000000004863 128.0
CMS1_k127_1847446_5 Transmembrane secretion effector - - - 0.0000000000001542 72.0
CMS1_k127_1868767_0 Glucose-1-phosphate adenylyltransferase K00975 - 2.7.7.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008085 594.0
CMS1_k127_1868767_1 Domain of unknown function (DUF4445) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003941 594.0
CMS1_k127_1868767_2 Belongs to the bacterial plant glucose-1-phosphate adenylyltransferase family K00975,K20427 - 2.7.7.27,2.7.7.91 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003809 572.0
CMS1_k127_1868767_3 PFAM phosphoesterase RecJ domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003769 499.0
CMS1_k127_1868767_4 permease YjgP YjgQ family K07091 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003014 317.0
CMS1_k127_1868767_5 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000988 253.0
CMS1_k127_1868767_6 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0008150,GO:0008509,GO:0015075,GO:0015103,GO:0015318,GO:0015698,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0098656,GO:0098660,GO:0098661,GO:1903424,GO:1903425 - 0.00000000000000000000000000000000000001728 147.0
CMS1_k127_1870696_0 Transglutaminase/protease-like homologues - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008206 466.0
CMS1_k127_1870696_1 PFAM Rhodanese domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000003127 247.0
CMS1_k127_1870696_2 Rhodanese Homology Domain - - - 0.00000000000000000000000000000001057 134.0
CMS1_k127_1876076_0 Belongs to the aspartokinase family K12524,K12525 GO:0003674,GO:0003824,GO:0004072,GO:0004412,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006553,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009069,GO:0009070,GO:0009085,GO:0009089,GO:0009090,GO:0009092,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016491,GO:0016614,GO:0016616,GO:0016740,GO:0016772,GO:0016774,GO:0019202,GO:0019752,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.3,2.7.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004874 511.0
CMS1_k127_1876076_1 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004788 313.0
CMS1_k127_1876076_2 Ribbon-helix-helix protein, copG family - - - 0.000000000000000000000000000000000000000000003597 165.0
CMS1_k127_1876076_3 Plasmid stabilization - - - 0.00000000000000000000000000000000000004251 144.0
CMS1_k127_1876076_4 Putative quorum-sensing-regulated virulence factor K09954 - - 0.000000000000000000000000000008576 119.0
CMS1_k127_1876076_6 PFAM EAL domain - - - 0.00000000000000004837 83.0
CMS1_k127_1876076_7 COGs COG3547 Transposase and inactivated derivatives - - - 0.0000000001824 64.0
CMS1_k127_1876076_8 TIGRFAM amidase, hydantoinase carbamoylase family K06016 - 3.5.1.6,3.5.1.87 0.000000002131 61.0
CMS1_k127_1876076_9 Protein of unknown function (DUF2971) - - - 0.00000002666 55.0
CMS1_k127_1901304_0 Homocysteine S-methyltransferase K00297,K00547,K00548 - 1.5.1.20,2.1.1.10,2.1.1.13 4.862e-232 734.0
CMS1_k127_1901304_1 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 GO:0003674,GO:0003824,GO:0004478,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016740,GO:0016765,GO:0044424,GO:0044444,GO:0044464 2.5.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006978 512.0
CMS1_k127_1901304_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009152 365.0
CMS1_k127_1901304_3 von Willebrand factor (vWF) type A domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008161 268.0
CMS1_k127_1901304_4 Asparagine synthase, glutamine-hydrolyzing K01953 - 6.3.5.4 0.000000000000000000000005104 103.0
CMS1_k127_1907678_0 PFAM type II secretion system protein E K02283,K03609 - - 2.465e-210 661.0
CMS1_k127_1907678_1 PFAM Hemerythrin HHE cation binding domain K09155 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000422 431.0
CMS1_k127_1907678_2 Flp pilus polar localization response receiver ATPase TadZ, FlhG domain-containing K02282 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000684 409.0
CMS1_k127_1907678_3 Putative Flp pilus-assembly TadE/G-like - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002075 390.0
CMS1_k127_1907678_4 Type II secretion system (T2SS), protein F K12510 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006049 381.0
CMS1_k127_1907678_5 Type II secretion system (T2SS), protein F K12511 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003915 318.0
CMS1_k127_1907678_6 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000008869 217.0
CMS1_k127_1907678_7 pseudouridine synthase activity K06180 - 5.4.99.23 0.0000000000000000000000000000000000000000000000000000000009014 214.0
CMS1_k127_1907678_8 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.000000000000000000000000000000000000000000000000001784 188.0
CMS1_k127_1907678_9 SH3 domain - - - 0.000000000000000000002327 101.0
CMS1_k127_1915491_0 Protein involved in outer membrane biogenesis - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001551 578.0
CMS1_k127_1915491_1 Conserved TM helix K03442 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008028 364.0
CMS1_k127_1915491_2 Phosphoribosyl transferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000184 257.0
CMS1_k127_1915491_3 metal-dependent phosphohydrolase, HD sub domain K07814 - - 0.000000000000000000000000000000000000000000000000000000000000000008486 239.0
CMS1_k127_1915491_5 protein conserved in bacteria K09912 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000006451 90.0
CMS1_k127_1915491_6 PFAM Integrase catalytic region K07497 - - 0.00000000000005198 73.0
CMS1_k127_1917384_0 overlaps another CDS with the same product name K07011 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001903 464.0
CMS1_k127_1917384_1 Glycosyltransferase like family K07011 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004468 401.0
CMS1_k127_1917384_2 PFAM NAD-dependent epimerase dehydratase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006455 340.0
CMS1_k127_1917384_3 - - - - 0.0000000000000000000000000000000000000007599 167.0
CMS1_k127_1946256_0 Protein of unknown function (DUF2867) - - - 1.75e-214 675.0
CMS1_k127_1946256_1 Protein of unknown function (DUF1722) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002212 419.0
CMS1_k127_1946256_2 Phosphohydrolase-associated domain K01129 - 3.1.5.1 0.00000000000000000000000000000000000000000000000000000000000000000000000002168 254.0
CMS1_k127_1946256_3 Lipocalin-like domain K03098 - - 0.00000000000000000000000000000000000000000000000000000009394 200.0
CMS1_k127_1946256_4 esterase - - - 0.000000000000000000000000000000000000001231 159.0
CMS1_k127_1946256_5 PFAM pyridoxamine 5-phosphate - - - 0.00000000000000000000000000000000001711 139.0
CMS1_k127_1946256_6 alpha beta K06889 - - 0.000000000000000000005073 103.0
CMS1_k127_1987800_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 GO:0003674,GO:0003824,GO:0004812,GO:0004829,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006435,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.3 1.741e-312 968.0
CMS1_k127_1987800_1 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 1.813e-278 877.0
CMS1_k127_1987800_10 Pyridine nucleotide-disulphide oxidoreductase K00384 - 1.8.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002024 411.0
CMS1_k127_1987800_11 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005544 407.0
CMS1_k127_1987800_12 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002415 340.0
CMS1_k127_1987800_13 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine K03648 - 3.2.2.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001486 311.0
CMS1_k127_1987800_14 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001732 278.0
CMS1_k127_1987800_15 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 - 4.3.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000834 259.0
CMS1_k127_1987800_16 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0006996,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016043,GO:0019538,GO:0022411,GO:0032790,GO:0032984,GO:0032988,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903008 - 0.000000000000000000000000000000000000000000000000000000000000000000009191 240.0
CMS1_k127_1987800_17 Specifically methylates the guanosine in position 1516 of 16S rRNA K15984 - 2.1.1.242 0.00000000000000000000000000000000000000000000000000000000000000000006332 239.0
CMS1_k127_1987800_18 Nitrite/Sulfite reductase ferredoxin-like half domain - - - 0.000000000000000000000000000000000000000000000000000000000000001835 224.0
CMS1_k127_1987800_19 PFAM Curli production assembly transport component CsgG - - - 0.0000000000000000000000000000000000000000000000000000000001119 227.0
CMS1_k127_1987800_2 YcaO cyclodehydratase, ATP-ad Mg2+-binding K09136 - - 9.522e-239 751.0
CMS1_k127_1987800_20 PFAM 6-pyruvoyl tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.00000000000000000000000000000000000000000000000000002047 192.0
CMS1_k127_1987800_21 Methyltransferase small domain K15460 - 2.1.1.223 0.00000000000000000000000000000000000000000000000000004833 196.0
CMS1_k127_1987800_22 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K11991 GO:0002097,GO:0002100,GO:0003674,GO:0003824,GO:0004000,GO:0005488,GO:0006139,GO:0006382,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008251,GO:0008270,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016553,GO:0016787,GO:0016810,GO:0016814,GO:0019239,GO:0034470,GO:0034641,GO:0034660,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0046872,GO:0046914,GO:0052717,GO:0071704,GO:0090304,GO:1901360 3.5.4.33 0.000000000000000000000000000000000000000000000000102 181.0
CMS1_k127_1987800_23 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015934,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042273,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.0000000000000000000000000000000000000000001378 161.0
CMS1_k127_1987800_24 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.0000000000000000000000000000000000000002199 151.0
CMS1_k127_1987800_25 - - - - 0.000000000000000000000000000000000000001564 151.0
CMS1_k127_1987800_26 regulation of translation K04764 - - 0.000000000000000000000000000000000003927 138.0
CMS1_k127_1987800_27 PFAM regulatory protein, MerR - - - 0.000000000000000000000000001431 116.0
CMS1_k127_1987800_28 Belongs to the bacterial ribosomal protein bL35 family K02916 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000002693 97.0
CMS1_k127_1987800_29 - - - - 0.000000000000000000000273 103.0
CMS1_k127_1987800_3 Required for morphogenesis under gluconeogenic growth conditions - - - 2.675e-229 731.0
CMS1_k127_1987800_30 - - - - 0.00000000006531 63.0
CMS1_k127_1987800_31 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 0.0000003074 56.0
CMS1_k127_1987800_34 S-layer domain protein - - - 0.0001284 54.0
CMS1_k127_1987800_35 - - - - 0.0004604 43.0
CMS1_k127_1987800_4 Radical SAM superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004855 594.0
CMS1_k127_1987800_5 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008548 551.0
CMS1_k127_1987800_6 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000347 530.0
CMS1_k127_1987800_7 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 GO:0003674,GO:0003824,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016491,GO:0016614,GO:0016615,GO:0016999,GO:0017144,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0055114,GO:0071704,GO:0072350 1.1.1.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005127 511.0
CMS1_k127_1987800_8 PFAM filamentation induced by cAMP protein Fic - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002472 502.0
CMS1_k127_1987800_9 Protein of unknown function (DUF1015) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003341 496.0
CMS1_k127_2005240_0 AcrB/AcrD/AcrF family K03296 - - 0.0 1356.0
CMS1_k127_2005240_1 PFAM Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007131 542.0
CMS1_k127_2005240_10 Methyl-transferase - - - 0.000000006257 68.0
CMS1_k127_2005240_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001189 370.0
CMS1_k127_2005240_3 Enoyl-(Acyl carrier protein) reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002015 347.0
CMS1_k127_2005240_4 Uncharacterized conserved protein (COG2071) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002996 304.0
CMS1_k127_2005240_5 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086,K03089 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004504 297.0
CMS1_k127_2005240_6 Domain of unknown function (DUF362) - - - 0.00000000000000000000000000000000000000000000000000000000000000000006741 242.0
CMS1_k127_2005240_7 Las17-binding protein actin regulator - - - 0.000000000000000000000000000000000000000000000000000000000000005332 224.0
CMS1_k127_2005240_8 TIGRFAM maf protein K06287 - - 0.000000000000000000000000000000000000000000000000000001365 197.0
CMS1_k127_2005240_9 PFAM chemotaxis K03406,K07216 - - 0.00000000000007962 77.0
CMS1_k127_2005655_0 transporter of a GTP-driven Fe(2 ) uptake system K04759 - - 1.939e-237 749.0
CMS1_k127_2005655_1 Belongs to the Fur family K03711 - - 0.00000000000000000000003226 100.0
CMS1_k127_2005655_2 PFAM FeoA domain K04758 - - 0.0000000000001549 73.0
CMS1_k127_2005655_3 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - 0.0002651 49.0
CMS1_k127_2005655_4 competence protein - - - 0.0003521 45.0
CMS1_k127_2019092_0 Belongs to the peptidase M16 family K07263 - - 3.507e-315 992.0
CMS1_k127_2019092_1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006349 584.0
CMS1_k127_2019092_10 - - - - 0.0000000000000000000003033 100.0
CMS1_k127_2019092_11 YfaZ precursor - - - 0.000000000000002426 83.0
CMS1_k127_2019092_13 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.000000002217 63.0
CMS1_k127_2019092_14 - - - - 0.00000001597 66.0
CMS1_k127_2019092_2 PFAM glycyl-tRNA synthetase alpha subunit K01878 - 6.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005127 511.0
CMS1_k127_2019092_3 Protein of unknown function (DUF3373) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002381 436.0
CMS1_k127_2019092_4 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA K03500 - 2.1.1.176 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000097 373.0
CMS1_k127_2019092_5 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004937 335.0
CMS1_k127_2019092_6 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004057 323.0
CMS1_k127_2019092_7 Belongs to the multicopper oxidase YfiH RL5 family K05810 - - 0.000000000000000000000000000000000000000000000000000000000000000000001055 244.0
CMS1_k127_2019092_8 DNA-binding transcription factor activity - - - 0.00000000000000000000000000000000000202 139.0
CMS1_k127_2019092_9 Cyclic nucleotide-monophosphate binding domain - - - 0.0000000000000000000000000000002028 132.0
CMS1_k127_202212_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 1.527e-291 901.0
CMS1_k127_202212_1 TIGRFAM branched-chain amino acid aminotransferase K00826 - 2.6.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001067 470.0
CMS1_k127_202212_2 AI-2E family transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001129 400.0
CMS1_k127_202212_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000006861 258.0
CMS1_k127_202212_4 Belongs to the P(II) protein family K04751 - - 0.000000000000000000000000000000000000000000000009793 175.0
CMS1_k127_202212_5 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 - - 0.00000000000000000000000000000000000000000003851 162.0
CMS1_k127_202212_6 ammonium transporteR K03320 - - 0.0005817 44.0
CMS1_k127_2028871_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.0 1525.0
CMS1_k127_2028871_1 Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor K00833 - 2.6.1.62 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000277 546.0
CMS1_k127_2028871_10 - - - - 0.0000000000000000007155 90.0
CMS1_k127_2028871_11 Pfam:DUF1049 - - - 0.00000000008097 65.0
CMS1_k127_2028871_12 - - - - 0.0000004631 63.0
CMS1_k127_2028871_2 Barrel-sandwich domain of CusB or HlyD membrane-fusion - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001292 353.0
CMS1_k127_2028871_3 Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002229 338.0
CMS1_k127_2028871_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001059 258.0
CMS1_k127_2028871_5 TrkA-C domain - - - 0.0000000000000000000000000000000000000000000000147 179.0
CMS1_k127_2028871_6 - - - - 0.0000000000000000000000000000000001019 138.0
CMS1_k127_2028871_7 DNA-binding transcription factor activity - - - 0.000000000000000000000000156 112.0
CMS1_k127_2028871_8 - - - - 0.0000000000000000000000002951 114.0
CMS1_k127_2028871_9 - - - - 0.0000000000000000000009449 98.0
CMS1_k127_2032140_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0 1295.0
CMS1_k127_2032140_1 Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine K00641 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004414,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008374,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009069,GO:0009086,GO:0009092,GO:0009987,GO:0016053,GO:0016407,GO:0016413,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.3.1.31 3.684e-199 625.0
CMS1_k127_2032140_10 sequence-specific DNA binding - - - 0.00000000000000000000000000000000000000000000000000000000001138 208.0
CMS1_k127_2032140_11 MOSC domain - - - 0.0000000000000000000000000000000000000000000000000001559 189.0
CMS1_k127_2032140_12 PilZ domain - - - 0.0000000000000000000000000000000007321 136.0
CMS1_k127_2032140_13 TIGRFAM C_GCAxxG_C_C family protein - - - 0.0000000000000000000119 99.0
CMS1_k127_2032140_2 class II (D K and N) K01893 - 6.1.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002156 604.0
CMS1_k127_2032140_3 PFAM Cys Met metabolism K01740 - 2.5.1.49 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006335 577.0
CMS1_k127_2032140_4 Belongs to the cysteine synthase cystathionine beta- synthase family K01738 - 2.5.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009561 458.0
CMS1_k127_2032140_5 Bacterial transferase hexapeptide (six repeats) K00640 - 2.3.1.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002801 432.0
CMS1_k127_2032140_6 PFAM Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000857 289.0
CMS1_k127_2032140_7 TIGRFAM methionine biosynthesis protein MetW - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002917 269.0
CMS1_k127_2032140_8 PFAM Isochorismatase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004709 258.0
CMS1_k127_2032140_9 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0032296,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363 3.1.26.3 0.000000000000000000000000000000000000000000000000000000000000000000000000002381 261.0
CMS1_k127_2037014_0 acyl-CoA dehydrogenase K06445 - - 1.271e-258 817.0
CMS1_k127_2037014_1 Belongs to the ABC transporter superfamily K02031,K02032,K13892,K13896 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001225 612.0
CMS1_k127_2037014_3 PFAM Binding-protein-dependent transport system inner membrane component K13895 - - 0.000000000003912 66.0
CMS1_k127_2037230_0 AAA ATPase K07478 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001145 578.0
CMS1_k127_2037230_1 May be involved in recombinational repair of damaged DNA K03631 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006887 535.0
CMS1_k127_2037230_10 Histidine kinase - - - 0.0000000000000000000001853 102.0
CMS1_k127_2037230_11 DHHA2 K15986 - 3.6.1.1 0.00000000000002172 72.0
CMS1_k127_2037230_12 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.00006046 46.0
CMS1_k127_2037230_13 - - - - 0.0003014 47.0
CMS1_k127_2037230_2 PFAM peptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009709 386.0
CMS1_k127_2037230_3 Putative diguanylate phosphodiesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001504 377.0
CMS1_k127_2037230_4 Thiamine biosynthesis protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006396 347.0
CMS1_k127_2037230_5 Belongs to the 5'-nucleotidase family - - - 0.000000000000000000000000000000000000000000000000000000000000000004 243.0
CMS1_k127_2037230_6 PFAM peptidase - - - 0.0000000000000000000000000000000000000000000000000001111 196.0
CMS1_k127_2037230_7 protein phosphatase 2C domain protein K01090,K20074 - 3.1.3.16 0.000000000000000000000000000000000000002589 160.0
CMS1_k127_2037230_8 Forkhead associated domain - - - 0.000000000000000000000000000000000007848 145.0
CMS1_k127_2037230_9 Polymer-forming cytoskeletal - - - 0.0000000000000000000000002719 110.0
CMS1_k127_2038188_0 pyruvate phosphate dikinase - - - 1.082e-277 876.0
CMS1_k127_2038188_1 Belongs to the Glu Leu Phe Val dehydrogenases family K00261,K00262 - 1.4.1.3,1.4.1.4 2.334e-237 740.0
CMS1_k127_2038188_2 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K01663,K02500 - - 0.000000002365 61.0
CMS1_k127_2040950_0 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 GO:0002097,GO:0002099,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016853,GO:0018130,GO:0019438,GO:0034404,GO:0034470,GO:0034641,GO:0034654,GO:0034660,GO:0042455,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0051075,GO:0055086,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.99.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001369 435.0
CMS1_k127_2040950_1 Uncharacterised protein family UPF0047 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003135 276.0
CMS1_k127_2040950_2 metal-dependent phosphohydrolase HD sub K00970 - 2.7.7.19 0.000000000000000000000000000000002212 138.0
CMS1_k127_2040950_3 ParB domain protein nuclease K03497 - - 0.000000000000000000000000000000004613 141.0
CMS1_k127_2041381_0 Putative MetA-pathway of phenol degradation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002224 329.0
CMS1_k127_2041381_1 Isoprenylcysteine carboxyl methyltransferase (ICMT) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003647 289.0
CMS1_k127_2041381_10 TIGRFAM Glutaredoxin-like domain protein - - - 0.0000000001067 67.0
CMS1_k127_2041381_11 Short C-terminal domain K08982 - - 0.0000000003464 63.0
CMS1_k127_2041381_2 ECF sigma factor K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002335 269.0
CMS1_k127_2041381_3 cytochrome c biogenesis protein K06196 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000648 254.0
CMS1_k127_2041381_4 Protein of unknown function (DUF3106) - - - 0.0000000000000000000000000000000000000000001088 167.0
CMS1_k127_2041381_5 Putative zinc-finger - - - 0.00000000000000000000000000000000002625 140.0
CMS1_k127_2041381_6 membrane - - - 0.00000000000000000000000000000000004396 140.0
CMS1_k127_2041381_7 Domain of unknown function (DUF296) - - - 0.00000000000000000000000000001951 117.0
CMS1_k127_2041381_8 - - - - 0.0000000000000000000002483 98.0
CMS1_k127_2041381_9 Protein of unknown function (DUF2933) - - - 0.0000000000000002119 82.0
CMS1_k127_204821_0 TIGRFAM penicillin-binding protein, 1A family K05366 - 2.4.1.129,3.4.16.4 9.268e-301 956.0
CMS1_k127_204821_1 TIGRFAM sulfate adenylyltransferase K00958,K13811 - 2.7.1.25,2.7.7.4 3.555e-245 761.0
CMS1_k127_204821_2 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735,K13829 - 2.7.1.71,4.2.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003379 479.0
CMS1_k127_204821_3 Belongs to the peptidase S11 family K07258 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002133 312.0
CMS1_k127_204821_4 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004074 253.0
CMS1_k127_204821_5 Protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000001227 209.0
CMS1_k127_204821_6 5-formyltetrahydrofolate cyclo-ligase family K01934 - 6.3.3.2 0.0000000000000000000000000000000000000000000001553 175.0
CMS1_k127_2133056_0 Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation K06147,K11085 - - 1.519e-217 689.0
CMS1_k127_2133056_1 O-Antigen ligase K02847 - - 0.0000000000000000000000000000000000000000000000000000000000000000558 236.0
CMS1_k127_2179030_0 molybdopterin cofactor binding K08352 - 1.8.5.5 2.738e-289 904.0
CMS1_k127_2179030_1 Polysulfide reductase K16294 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002147 308.0
CMS1_k127_2179030_2 4 iron, 4 sulfur cluster binding K04014,K08353,K08358,K16293 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0008150,GO:0008152,GO:0016491,GO:0016661,GO:0016662,GO:0030288,GO:0030313,GO:0031975,GO:0042279,GO:0042597,GO:0044464,GO:0055114,GO:0098809 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000009668 281.0
CMS1_k127_2202123_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 0.0 1064.0
CMS1_k127_2202123_1 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 - 2.5.1.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005902 513.0
CMS1_k127_2202123_2 Sulfite exporter TauE/SafE K07090 - - 0.000000000000000000000000000000000000000000000000008089 186.0
CMS1_k127_225602_0 Male sterility protein K01710 - 4.2.1.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002716 539.0
CMS1_k127_225602_1 Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis K00973 - 2.7.7.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002241 456.0
CMS1_k127_225602_2 Transport permease protein K09690 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003488 399.0
CMS1_k127_225602_3 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 - 1.1.1.133 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000169 362.0
CMS1_k127_225602_4 Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose K01790 - 5.1.3.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003016 287.0
CMS1_k127_229598_0 PFAM Glycoside hydrolase 15-related - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006225 426.0
CMS1_k127_229598_1 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.000000000000000000000000000001849 132.0
CMS1_k127_229598_2 SMART Extracellular solute-binding protein, family 3 K02020 - - 0.0000000000006111 75.0
CMS1_k127_2299051_0 TIGRFAM alpha-glucan K00688 - 2.4.1.1 2.447e-298 932.0
CMS1_k127_2299051_1 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 4.902e-280 871.0
CMS1_k127_2299051_2 PFAM Adenylate and Guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000002348 209.0
CMS1_k127_2299051_3 - - - - 0.0000000000000000000000000000000001949 134.0
CMS1_k127_2299051_4 Belongs to the ompA family K03640 - - 0.0000000000000000000000001577 111.0
CMS1_k127_2299051_5 - - - - 0.0000000000000003796 79.0
CMS1_k127_2299051_6 Rdx family K07401 - - 0.0000005097 53.0
CMS1_k127_2305888_0 Cytochrome c oxidase subunit K00404 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003273 510.0
CMS1_k127_2305888_1 cytochrome c oxidase cbb3-type, subunit II K00405 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001756 262.0
CMS1_k127_2305888_2 Acyl dehydratase - - - 0.000000000000000000000000000003651 124.0
CMS1_k127_2305888_3 Opacity family porin protein - - - 0.0001528 51.0
CMS1_k127_2317335_0 Glycerol-3-phosphate dehydrogenase K00111 - 1.1.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000144 361.0
CMS1_k127_2317335_1 Rubrerythrin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004864 304.0
CMS1_k127_2317335_2 Redoxin K03386 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002673 271.0
CMS1_k127_2317335_3 PFAM Oxidoreductase FAD NAD(P)-binding K00326 - 1.6.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000001951 265.0
CMS1_k127_2317335_4 Glycerophosphoryl diester phosphodiesterase family K01126 - 3.1.4.46 0.000000000000000000000000000000000000000000000000000000000000000006165 233.0
CMS1_k127_2317335_6 - - - - 0.000000000000008341 74.0
CMS1_k127_2330532_0 flagellar basal-body rod protein FlgG K02392 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001841 417.0
CMS1_k127_2330532_1 Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation K02394 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005628 287.0
CMS1_k127_2330532_2 Flagellar L-ring protein K02393 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007063 285.0
CMS1_k127_2330532_3 flagella basal body P-ring formation protein FlgA K02386 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001366 261.0
CMS1_k127_2330532_4 Belongs to the flagella basal body rod proteins family K02391,K02392 - - 0.000001495 49.0
CMS1_k127_2341387_0 Putative metal-binding domain of cation transport ATPase K01533 - 3.6.3.4 1.18e-273 863.0
CMS1_k127_2341387_1 Cytochrome C and Quinol oxidase polypeptide I K00404,K15862 - 1.9.3.1 3.438e-265 820.0
CMS1_k127_2341387_10 N-terminal domain of cytochrome oxidase-cbb3, FixP - - - 0.00000000000000007926 82.0
CMS1_k127_2341387_11 Domain of unknown function (DUF4492) - - - 0.0000000000000001313 81.0
CMS1_k127_2341387_12 Cytochrome oxidase maturation protein cbb3-type - - - 0.0000000000001088 74.0
CMS1_k127_2341387_2 PFAM cytochrome bd ubiquinol oxidase subunit I K00425 - 1.10.3.14 3.509e-215 678.0
CMS1_k127_2341387_3 Associated with various cellular activities K04748 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005148 557.0
CMS1_k127_2341387_4 Cytochrome d ubiquinol oxidase, subunit II K00426 - 1.10.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000128 507.0
CMS1_k127_2341387_5 cytochrome C oxidase mono-heme subunit FixO K00405 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004688 418.0
CMS1_k127_2341387_6 4Fe-4S dicluster domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006445 349.0
CMS1_k127_2341387_7 Cytochrome C biogenesis protein transmembrane region K09792 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003671 299.0
CMS1_k127_2341387_8 COG0457 FOG TPR repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000002178 234.0
CMS1_k127_2341387_9 FixH - - - 0.0000000000000000000000000003858 119.0
CMS1_k127_2360019_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072,K12257 - - 5.455e-263 836.0
CMS1_k127_2360019_1 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 6.793e-196 623.0
CMS1_k127_2360019_10 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.0000000000000000002319 87.0
CMS1_k127_2360019_11 His Kinase A (phosphoacceptor) domain - - - 0.000000000000001506 88.0
CMS1_k127_2360019_2 PFAM Pyridoxal-5'-phosphate-dependent protein beta subunit K01733 - 4.2.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003491 592.0
CMS1_k127_2360019_3 CobB/CobQ-like glutamine amidotransferase domain K01952 - 6.3.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003564 443.0
CMS1_k127_2360019_4 The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate K03783 - 2.4.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007049 332.0
CMS1_k127_2360019_5 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003765 254.0
CMS1_k127_2360019_6 Metal dependent phosphohydrolases with conserved 'HD' motif. K06950 - - 0.000000000000000000000000000000000000000000000000000000000000000004029 234.0
CMS1_k127_2360019_7 Putative zinc- or iron-chelating domain K06940 - - 0.00000000000000000000000000000000000000000000000000000000002546 213.0
CMS1_k127_2360019_8 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.000000000000000000000000000000000000000002495 158.0
CMS1_k127_2360019_9 Histidine kinase - - - 0.0000000000000000000000000002691 119.0
CMS1_k127_238486_0 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 3.471e-289 900.0
CMS1_k127_238486_1 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008514 608.0
CMS1_k127_238486_2 Belongs to the 'phage' integrase family. XerC subfamily K03733,K04763 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003448 355.0
CMS1_k127_238486_3 Belongs to the FPP GGPP synthase family K00795,K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004089 302.0
CMS1_k127_238486_4 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 - 3.4.25.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002978 277.0
CMS1_k127_238486_6 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.0000000000000000000003354 97.0
CMS1_k127_238486_7 outer membrane chaperone Skp (OmpH) K06142 - - 0.0000000000000008652 85.0
CMS1_k127_238486_8 Belongs to the ompA family K03640 - - 0.00000000001198 64.0
CMS1_k127_238518_0 ATPase associated with various cellular activities AAA_5 K04748 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000239 429.0
CMS1_k127_238518_1 Von Willebrand factor type A K02448 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006297 349.0
CMS1_k127_238518_2 DNA ligase OB-like domain K10747 - 6.5.1.1,6.5.1.6,6.5.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000134 309.0
CMS1_k127_238518_3 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000000000000000000000000000000000000000000002087 203.0
CMS1_k127_238518_4 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 0.00000000000000000000000000000000000000000001429 166.0
CMS1_k127_238518_5 - - - - 0.000000001915 61.0
CMS1_k127_239263_0 Protein involved in outer membrane biogenesis - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008099 367.0
CMS1_k127_239263_1 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000001318 271.0
CMS1_k127_239263_2 Uncharacterized protein conserved in bacteria (DUF2062) - - - 0.0000000000000000000000000000000000000000000000007364 180.0
CMS1_k127_239263_3 protocatechuate 3,4-dioxygenase activity K03381 - 1.13.11.1 0.0000000000000000000000000000000000000000002775 163.0
CMS1_k127_239263_4 Voltage gated chloride channel K03281 - - 0.0000000000000000000000000000004021 127.0
CMS1_k127_239263_5 Voltage gated chloride channel K03281 - - 0.0000000004449 60.0
CMS1_k127_23937_0 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K07636 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005092 438.0
CMS1_k127_23937_1 Psort location Cytoplasmic, score 8.96 K01270 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001631 408.0
CMS1_k127_23937_2 Plays a role in the regulation of phosphate uptake K02039 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001073 276.0
CMS1_k127_23937_3 Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source - - - 0.0000000000000000000000000000000000000000000002632 170.0
CMS1_k127_23937_4 Bacterial SH3 domain homologues K07184 - - 0.00000000000000000000000000000000000000000005457 169.0
CMS1_k127_23937_5 - - - - 0.000000000000000000000000000000000000002782 152.0
CMS1_k127_23937_6 Protein of unknown function (DUF1499) - - - 0.00000000000000000000000000000000000001318 147.0
CMS1_k127_23937_7 Dodecin K09165 - - 0.00000000000000000006695 91.0
CMS1_k127_23937_8 - - - - 0.000000000009702 70.0
CMS1_k127_23937_9 Protein of unknown function (DUF498/DUF598) - - - 0.00000001451 63.0
CMS1_k127_2425579_0 Lytic transglycosylase catalytic K08307 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002582 547.0
CMS1_k127_2425579_1 Phosphohydrolase-associated domain K01129 - 3.1.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003575 389.0
CMS1_k127_2425579_2 Mechanosensitive ion channel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004327 364.0
CMS1_k127_2425579_3 PFAM short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002075 329.0
CMS1_k127_2425579_5 TIGRFAM penicillin-binding protein, 1A family K05366 - 2.4.1.129,3.4.16.4 0.00000000002068 67.0
CMS1_k127_2459268_0 Zn-dependent protease with chaperone function K03799,K06013 - 3.4.24.84 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007107 556.0
CMS1_k127_2459268_1 ZIP Zinc transporter K16267 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001064 295.0
CMS1_k127_2459268_2 nitrite sulfite reductase hemoprotein beta-component ferrodoxin domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004605 292.0
CMS1_k127_2459268_3 - - - - 0.000000000000000000000000000000000000000000000000000000000001827 218.0
CMS1_k127_2459268_4 radical SAM K04034 - 1.21.98.3 0.000000000000000000000000000000001497 133.0
CMS1_k127_2482139_0 Protein tyrosine kinase K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003218 463.0
CMS1_k127_2482139_1 Calcineurin-like phosphoesterase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000004913 241.0
CMS1_k127_2482139_2 DJ-1/PfpI family K05520 - 3.5.1.124 0.0000000000000000000000000000000000000000000000003747 177.0
CMS1_k127_2482139_3 TIGRFAM thioredoxin K03672 - 1.8.1.8 0.00000000000000000000000000000000000000004818 156.0
CMS1_k127_249764_0 SMART Elongator protein 3 MiaB NifB - - - 2.33e-299 937.0
CMS1_k127_249764_1 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 3.944e-275 859.0
CMS1_k127_249764_10 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000000000000000000000000033 189.0
CMS1_k127_249764_11 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.0000000000000000000000000000000000000000000000001068 183.0
CMS1_k127_249764_12 Belongs to the UPF0102 family K07460 - - 0.00000000000000000000000000000002804 129.0
CMS1_k127_249764_13 Belongs to the bacterial ribosomal protein bS16 family K02959 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000003305 115.0
CMS1_k127_249764_14 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.000000000000000000000000002664 118.0
CMS1_k127_249764_16 Belongs to the UPF0109 family K06960 - - 0.000000000000000000003853 94.0
CMS1_k127_249764_2 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03106 - 3.6.5.4 1.31e-202 639.0
CMS1_k127_249764_3 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003523 432.0
CMS1_k127_249764_4 TIGRFAM malonyl CoA-acyl carrier protein transacylase K00645 - 2.3.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001143 383.0
CMS1_k127_249764_5 Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) K00097,K22024 - 1.1.1.262,1.1.1.408,1.1.1.409 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001827 383.0
CMS1_k127_249764_6 Belongs to the RNA methyltransferase TrmD family K00554 GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050518,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.228 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002419 310.0
CMS1_k127_249764_7 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 GO:0003674,GO:0003824,GO:0004798,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009165,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.4.9 0.000000000000000000000000000000000000000000000000000000000000000000001103 241.0
CMS1_k127_249764_8 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006281,GO:0006298,GO:0006401,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0032299,GO:0032991,GO:0033554,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576 3.1.26.4 0.000000000000000000000000000000000000000000000000000000000000000158 228.0
CMS1_k127_249764_9 SAM-dependent RNA methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000008423 220.0
CMS1_k127_2499975_0 Ferric reductase like transmembrane component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001412 447.0
CMS1_k127_2499975_1 Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA K03498 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001442 411.0
CMS1_k127_2499975_2 PFAM HD domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005296 387.0
CMS1_k127_2499975_3 TrkA-N domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000005649 247.0
CMS1_k127_2499975_4 Cupin superfamily (DUF985) K09705 - - 0.00000000000000000000000000000000000000000000000000000000000004172 216.0
CMS1_k127_2499975_5 Membrane-associated sensor domain - - - 0.0000000000000000000003259 104.0
CMS1_k127_2526464_0 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 1.051e-317 979.0
CMS1_k127_2526464_1 HI0933-like protein K07007 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001096 545.0
CMS1_k127_2526464_10 Belongs to the purine pyrimidine phosphoribosyltransferase family K00760 - 2.4.2.8 0.000000000000000000000000000000000000000000000000000776 188.0
CMS1_k127_2526464_11 Belongs to the thioredoxin family K03671 - - 0.000000000000000000000000000000000000000000000000001036 184.0
CMS1_k127_2526464_12 Protein of unknown function (DUF1255) K09913 - 2.4.2.1,2.4.2.2 0.0000000000000000000000000000000000000000000003816 168.0
CMS1_k127_2526464_13 CoA-binding domain protein K06929 - - 0.00000000000000000000000000000000000000001503 157.0
CMS1_k127_2526464_15 Domain of unknown function (DUF309) - - - 0.000000000000000000000000005584 118.0
CMS1_k127_2526464_16 deoxyhypusine monooxygenase activity - - - 0.000000000000000000000000009869 113.0
CMS1_k127_2526464_17 PFAM single-stranded nucleic acid binding R3H K06346 - - 0.000000000000000000001417 95.0
CMS1_k127_2526464_19 Pectate lyase - - - 0.00000000000004092 82.0
CMS1_k127_2526464_2 TIGRFAM histidyl-tRNA synthetase K01892 - 6.1.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004403 526.0
CMS1_k127_2526464_20 Predicted RNA-binding protein - - - 0.0000000001891 63.0
CMS1_k127_2526464_21 - - - - 0.0000001065 54.0
CMS1_k127_2526464_3 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001293 483.0
CMS1_k127_2526464_4 Pyridine nucleotide-disulphide oxidoreductase K00384 - 1.8.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005941 379.0
CMS1_k127_2526464_5 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006291 357.0
CMS1_k127_2526464_6 Haloacid dehalogenase-like hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001462 264.0
CMS1_k127_2526464_7 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K09765 - 1.17.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000001232 243.0
CMS1_k127_2526464_8 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000005559 236.0
CMS1_k127_2526464_9 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K05807 - - 0.0000000000000000000000000000000000000000000000000000000001679 210.0
CMS1_k127_2562048_0 cobalt ion transport K02007,K02009,K16915 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002926 410.0
CMS1_k127_2562048_1 nickel-responsive regulator K07722 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1903506,GO:2000112,GO:2001141 - 0.0000000000000000000000000000000000000000000000000000000000006514 214.0
CMS1_k127_2562048_2 sequence-specific DNA binding - - - 0.000000000000000000000000000000000000000000000000000000365 195.0
CMS1_k127_2562048_3 Belongs to the NiCoT transporter (TC 2.A.52) family K08970 - - 0.00000000000000000000000000000000000000000001486 172.0
CMS1_k127_2562048_4 SMART Tetratricopeptide domain protein - - - 0.000000002736 63.0
CMS1_k127_2562718_0 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate K00147 GO:0003674,GO:0003824,GO:0004350,GO:0008150,GO:0008152,GO:0016491,GO:0016620,GO:0016903,GO:0055114 1.2.1.41 4.726e-197 621.0
CMS1_k127_2562718_1 serine threonine protein kinase K12132 - 2.7.11.1 3.319e-194 634.0
CMS1_k127_2562718_10 This protein binds to 23S rRNA in the presence of protein L20 K02888 GO:0003674,GO:0003735,GO:0005198 - 0.00000000000000000000000000000000000000008015 153.0
CMS1_k127_2562718_11 cytochrome C peroxidase - - - 0.00000000000000000002507 94.0
CMS1_k127_2562718_2 ribonuclease Rne Rng family K08300,K08301 - 3.1.26.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001323 512.0
CMS1_k127_2562718_3 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate K00931 GO:0003674,GO:0003824,GO:0004349,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006560,GO:0006561,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0018130,GO:0019202,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000285 484.0
CMS1_k127_2562718_4 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004026 434.0
CMS1_k127_2562718_5 Converts GTP to 7,8-dihydroneopterin triphosphate K09007 - 3.5.4.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001075 365.0
CMS1_k127_2562718_6 protein phosphatase 2C domain protein K01090,K20074 - 3.1.3.16 0.000000000000000000000000000000000000000000000000000000000000004202 226.0
CMS1_k127_2562718_7 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.000000000000000000000000000000000000000000000000000000000005061 216.0
CMS1_k127_2562718_8 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 GO:0000309,GO:0003674,GO:0003824,GO:0004515,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.7.18 0.00000000000000000000000000000000000000000004194 169.0
CMS1_k127_2562718_9 Belongs to the bacterial ribosomal protein bL27 family K02899 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000000000000003806 155.0
CMS1_k127_2584010_0 gamma-glutamyltransferase K00681 - 2.3.2.2,3.4.19.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002 567.0
CMS1_k127_2584010_1 ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity K06048 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001283 380.0
CMS1_k127_2584010_2 - - - - 0.0000000000000000000000000498 112.0
CMS1_k127_2594132_0 MMPL family K07003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007208 552.0
CMS1_k127_2594132_1 Uncharacterized protein conserved in bacteria (DUF2062) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008784 460.0
CMS1_k127_2594132_10 Beta-ketoacyl synthase, N-terminal domain K09458 - 2.3.1.179 0.00000000000000000000000000000000000000000001114 173.0
CMS1_k127_2594132_11 Phosphopantetheine attachment site K02078 - - 0.0000000000000000000000001375 108.0
CMS1_k127_2594132_12 dehydratase - - - 0.0000000000000000000000006754 109.0
CMS1_k127_2594132_14 3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity K02372 - 4.2.1.59 0.000000000001279 74.0
CMS1_k127_2594132_15 SmpA / OmlA family - - - 0.00000000007273 68.0
CMS1_k127_2594132_2 Beta-ketoacyl synthase, C-terminal domain K00647,K09458 - 2.3.1.179,2.3.1.41 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001868 425.0
CMS1_k127_2594132_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006362 376.0
CMS1_k127_2594132_4 lipid A biosynthesis acyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004845 346.0
CMS1_k127_2594132_5 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003168 321.0
CMS1_k127_2594132_6 Curli production assembly/transport component CsgG - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003573 293.0
CMS1_k127_2594132_7 PFAM Radical SAM domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000005892 235.0
CMS1_k127_2594132_8 Thioesterase-like superfamily K07107 - - 0.00000000000000000000000000000000000000000000001067 175.0
CMS1_k127_2594132_9 Outer membrane lipoprotein carrier protein LolA - - - 0.000000000000000000000000000000000000000000000717 173.0
CMS1_k127_2599248_0 TIGRFAM ATP-dependent helicase HrpA K03578,K03579 - 3.6.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004738 362.0
CMS1_k127_2599248_1 TIGRFAM Pyridine nucleotide-disulfide oxidoreductase family protein - - - 0.00000000000000000000000000000000000000000000000000000000002104 213.0
CMS1_k127_2599248_2 TIGRFAM Pyridine nucleotide-disulfide oxidoreductase family protein - - - 0.000000000000000000000000000000001797 132.0
CMS1_k127_2599248_3 Uncharacterized protein conserved in bacteria (DUF2065) K09937 - - 0.0000000001759 63.0
CMS1_k127_2624743_0 Diguanylate cyclase phosphodiesterase with PAS PAC - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002713 599.0
CMS1_k127_2624743_1 Sigma-54 interaction domain K07713 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006378 373.0
CMS1_k127_2624743_2 Phosphomethylpyrimidine kinase K16370 - 2.7.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000011 290.0
CMS1_k127_2624743_3 Belongs to the peptidase S16 family K01338,K04076,K04770 - 3.4.21.53 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000012 275.0
CMS1_k127_2624743_4 ABC transporter, phosphonate, periplasmic substrate-binding protein K02044 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001397 257.0
CMS1_k127_2624743_5 Protein of unknown function DUF134 - - - 0.00000000000000000000000000000000007753 138.0
CMS1_k127_2624743_6 PFAM Dinitrogenase iron-molybdenum cofactor - - - 0.0000000000000000000000008727 108.0
CMS1_k127_2624743_7 Phage tail sheath C-terminal domain K06907 - - 0.00000000000000008255 80.0
CMS1_k127_2658909_0 Pyridine nucleotide-disulphide oxidoreductase, dimerisation - - - 1.868e-248 778.0
CMS1_k127_2658909_1 TIGRFAM sulfite reductase, dissimilatory-type alpha subunit K11180 - 1.8.99.5 1.059e-241 750.0
CMS1_k127_2658909_2 TIGRFAM sulfite reductase, dissimilatory-type beta subunit K11181 - 1.8.99.5 1.989e-218 680.0
CMS1_k127_2658909_3 PFAM Dissimilatory sulfite reductase D - - - 0.000000000000000000000000000001446 122.0
CMS1_k127_2658909_4 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol K06131 - - 0.0000000000000000000000004249 114.0
CMS1_k127_2658909_5 Competence protein ComEA K02237 - - 0.000000004347 66.0
CMS1_k127_2679749_0 PFAM Histone deacetylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001441 392.0
CMS1_k127_2679749_1 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000789 334.0
CMS1_k127_2679749_2 radical SAM K04034 - 1.21.98.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005521 292.0
CMS1_k127_2679749_3 PFAM 5-formyltetrahydrofolate cyclo-ligase K01934 - 6.3.3.2 0.00000000000000000000000000000000000000000000000001795 185.0
CMS1_k127_2681929_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.0 1064.0
CMS1_k127_2681929_1 peptidyl-prolyl cis-trans isomerase K03771 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000001977 221.0
CMS1_k127_2681929_2 Helix-turn-helix domain K15539 - - 0.0000000000009003 78.0
CMS1_k127_269346_0 cyclic 2,3-diphosphoglycerate synthetase activity - - - 7.379e-217 681.0
CMS1_k127_269346_1 PFAM Transposase IS116 IS110 IS902 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004006 388.0
CMS1_k127_269346_2 PFAM Transposase IS116 IS110 IS902 family - - - 0.000000000001227 68.0
CMS1_k127_269346_3 LysR substrate binding domain - - - 0.000000835 50.0
CMS1_k127_269346_4 Transposase (IS116 IS110 IS902 family) - - - 0.0000032 51.0
CMS1_k127_271279_0 methionine sulfoxide reductase K07305,K12267 - 1.8.4.11,1.8.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000877 484.0
CMS1_k127_271279_1 Belongs to the MIP aquaporin (TC 1.A.8) family K06188 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001509 365.0
CMS1_k127_271279_2 Protein of unknown function (DUF3641) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001759 325.0
CMS1_k127_271279_3 Transcriptional regulatory protein, C terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001601 269.0
CMS1_k127_271279_4 crp fnr family K01420 - - 0.000000000000000000000000000000000008987 143.0
CMS1_k127_2724875_0 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007 - 2.7.9.2 0.0 1412.0
CMS1_k127_2724875_1 ATP-dependent DNA helicase RecQ K03654 - 3.6.4.12 1.077e-274 856.0
CMS1_k127_2724875_2 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 1.492e-239 749.0
CMS1_k127_2724875_3 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III K01835,K01840 - 5.4.2.2,5.4.2.8 5.322e-205 653.0
CMS1_k127_2724875_4 Belongs to the UPF0301 (AlgH) family K07735 - - 0.00000000000000000000000000000000000000000000000000000000000143 214.0
CMS1_k127_2724875_5 Putative zinc- or iron-chelating domain K06940 - - 0.00000000000000000000000000000000000000000000000008475 179.0
CMS1_k127_2724875_6 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 - 2.1.1.177 0.00000000000000000000000000000000000000000008689 164.0
CMS1_k127_2724875_7 PFAM nitrogen-fixing NifU domain protein - - - 0.0000000000000000007872 89.0
CMS1_k127_2726268_0 Belongs to the mannose-6-phosphate isomerase type 2 family K00971,K16011 GO:0000271,GO:0003674,GO:0003824,GO:0004475,GO:0005975,GO:0005976,GO:0006950,GO:0006970,GO:0006972,GO:0008150,GO:0008152,GO:0008905,GO:0008928,GO:0009058,GO:0009059,GO:0009242,GO:0009628,GO:0009987,GO:0016051,GO:0016740,GO:0016757,GO:0016772,GO:0016779,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0046377,GO:0050896,GO:0070568,GO:0071704,GO:1901135,GO:1901137,GO:1901576 2.7.7.13,5.3.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001194 540.0
CMS1_k127_2726268_1 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K13015 - 1.1.1.136 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000111 467.0
CMS1_k127_2748588_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.0 1147.0
CMS1_k127_2748588_1 HNH nucleases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001634 504.0
CMS1_k127_2748588_2 C-5 cytosine-specific DNA methylase K00558 - 2.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002382 449.0
CMS1_k127_2748588_3 Core component of the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. Binds to DNA. The KaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001038 272.0
CMS1_k127_2748588_4 NADPH-dependent FMN reductase K03809 - 1.6.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000004004 244.0
CMS1_k127_2748588_5 May nick specific sequences that contain T G mispairs resulting from m5C-deamination K07458 - - 0.00000000000000000000000000000000002796 138.0
CMS1_k127_2748588_7 - - - - 0.0000000000003999 71.0
CMS1_k127_2750842_0 Oxidizes proline to glutamate for use as a carbon and nitrogen source K13821 - 1.2.1.88,1.5.5.2 0.0 1218.0
CMS1_k127_2750842_1 PFAM NAD-dependent epimerase dehydratase K08678 - 4.1.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002805 535.0
CMS1_k127_2750842_2 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03092 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007745 494.0
CMS1_k127_2750842_3 PFAM Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000647 440.0
CMS1_k127_2750842_4 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000002101 228.0
CMS1_k127_2750842_5 Formylmethanofuran dehydrogenase, subunit e K11261 - 1.2.7.12 0.0000000000000000000000000000000000000000000000000000000001795 210.0
CMS1_k127_2750842_6 alpha-ribazole phosphatase activity K02226,K22305 - 3.1.3.3,3.1.3.73 0.00000000000000000000000000000000002171 141.0
CMS1_k127_2750842_7 Transposase DDE domain - - - 0.000000004474 59.0
CMS1_k127_2750842_8 Psort location Cytoplasmic, score 8.87 K01138 - - 0.00001004 51.0
CMS1_k127_2755879_0 Polysaccharide biosynthesis protein K15912 - 4.2.1.135 1.291e-222 706.0
CMS1_k127_2755879_1 Beta-ketoacyl synthase, C-terminal domain K09458 - 2.3.1.179 4.705e-216 676.0
CMS1_k127_2755879_2 Belongs to the UDP-N-acetylglucosamine 2-epimerase family K01791 - 5.1.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004489 601.0
CMS1_k127_2755879_3 NAD(P)H-binding K17716 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000571 515.0
CMS1_k127_2755879_4 Flavin containing amine oxidoreductase K09835,K10027 - 1.3.99.26,1.3.99.28,1.3.99.29,1.3.99.31,5.2.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001832 414.0
CMS1_k127_2755879_5 PFAM Glycosyl transferase family 4 K13007 - - 0.000000000000000000000000000000000000000000000000000000000000000002655 240.0
CMS1_k127_2755879_6 epimerase dehydratase - - - 0.0000000000000000000000000000000000000000000000000000000000000002594 231.0
CMS1_k127_2755879_7 Phosphopantetheine attachment site - - - 0.0000000000000000000000000000000000003655 142.0
CMS1_k127_2755879_8 RmlD substrate binding domain - - - 0.000000000000000000000000000000000296 134.0
CMS1_k127_277073_0 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K03737 - 1.2.7.1 0.0 1966.0
CMS1_k127_277073_1 Carbamoyl-phosphate synthetase large chain oligomerisation K01955 - 6.3.5.5 0.0 1651.0
CMS1_k127_277073_2 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 9.39e-295 914.0
CMS1_k127_277073_3 Belongs to the CarA family K01956 - 6.3.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002481 584.0
CMS1_k127_277073_4 PFAM Radical SAM K04069 - 1.97.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006035 449.0
CMS1_k127_277073_5 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796,K13941 - 2.5.1.15,2.7.6.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001556 323.0
CMS1_k127_277073_6 PFAM Three-deoxy-D-manno-octulosonic-acid transferase domain protein K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005472 312.0
CMS1_k127_277073_7 cell redox homeostasis K03671 - - 0.0000166 49.0
CMS1_k127_2776520_0 MltA-interacting protein MipA K07274 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005188 522.0
CMS1_k127_2776520_1 PFAM ATP-binding region, ATPase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003977 471.0
CMS1_k127_2776520_10 Heavy-metal resistance - - - 0.0000001167 60.0
CMS1_k127_2776520_2 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K07642 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005418 466.0
CMS1_k127_2776520_3 MGS-like domain K00602 - 2.1.2.3,3.5.4.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003491 335.0
CMS1_k127_2776520_4 response regulator K07664 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008693 334.0
CMS1_k127_2776520_5 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005568 297.0
CMS1_k127_2776520_6 PFAM Rhomboid family K07059 - - 0.00000000000000000000000000000000000000000000000000000000000000000005475 238.0
CMS1_k127_2776520_7 Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant K02825 - 2.4.2.9 0.00000000000000000000000000000000000000000000000000000000000006212 219.0
CMS1_k127_2776520_8 S4 RNA-binding domain K04762 GO:0003674,GO:0003676,GO:0003677,GO:0003723,GO:0003727,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009266,GO:0009408,GO:0009451,GO:0009628,GO:0009987,GO:0016070,GO:0033554,GO:0034605,GO:0034641,GO:0043021,GO:0043023,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363 - 0.0000000000000000000000000000000000001873 145.0
CMS1_k127_2776520_9 response regulator - - - 0.00000000001275 70.0
CMS1_k127_2786511_0 PFAM Iron-containing alcohol dehydrogenase K00001,K19954 - 1.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004179 520.0
CMS1_k127_2786511_1 Bacterial capsule synthesis protein PGA_cap K07282 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002605 309.0
CMS1_k127_2786511_2 Domain of unknown function (DUF296) - - - 0.0000000000000000000000000000000000000000000000000000000000000001044 224.0
CMS1_k127_2786511_3 PFAM peptidase - - - 0.00000000000000000000000000000000000000000000000001083 192.0
CMS1_k127_2786511_4 Domain of unknown function (DUF296) - - - 0.000000000000000000003162 95.0
CMS1_k127_2786511_5 Protein of unknown function (DUF615) K09889 - - 0.0000000000000000185 90.0
CMS1_k127_2821343_0 glycosyl transferase group 1 K00695 - 2.4.1.13 0.0 1062.0
CMS1_k127_2821343_1 PFAM SAICAR synthetase K01923 GO:0003674,GO:0003824,GO:0004639,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002781 436.0
CMS1_k127_2821343_2 HAD-superfamily hydrolase, subfamily IIB K00696 - 2.4.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001399 361.0
CMS1_k127_2821343_3 heat shock protein DnaJ domain protein K03686,K05516 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001664 325.0
CMS1_k127_2821343_4 PFAM PfkB K00847 - 2.7.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000023 288.0
CMS1_k127_2821343_5 Alcohol dehydrogenase GroES-like domain K13953 - 1.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001449 278.0
CMS1_k127_2821343_6 Single-stranded DNA-binding protein K03111 - - 0.0000000000000000000000000000000000000000000000000000000000001058 214.0
CMS1_k127_2821343_7 alcohol dehydrogenase K13953 - 1.1.1.1 0.000000000000000000000000001881 116.0
CMS1_k127_2821343_8 Alcohol dehydrogenase GroES-like domain K13953 - 1.1.1.1 0.0000000009289 61.0
CMS1_k127_2823710_0 ubiE/COQ5 methyltransferase family K07755 - 2.1.1.137 3.852e-274 864.0
CMS1_k127_2823710_1 ZIP Zinc transporter K07238 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006505 433.0
CMS1_k127_2823710_10 Protein of unknown function (DUF2892) - - - 0.000000000000000000004349 95.0
CMS1_k127_2823710_11 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.00000000000000000004456 106.0
CMS1_k127_2823710_12 RDD family - - - 0.000002922 59.0
CMS1_k127_2823710_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002989 432.0
CMS1_k127_2823710_3 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 - 3.2.2.23,4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000002885 252.0
CMS1_k127_2823710_4 Nitroreductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000001475 242.0
CMS1_k127_2823710_5 Histidine kinase - - - 0.000000000000000000000000000000000000000000001512 172.0
CMS1_k127_2823710_6 protein possibly involved in aromatic compounds catabolism - - - 0.000000000000000000000000000000000000000000004089 168.0
CMS1_k127_2823710_7 cyclic nucleotide binding K01420,K10716,K10914 - - 0.00000000000000000000000000000000000000001202 161.0
CMS1_k127_2823710_8 RDD family - - - 0.000000000000000000000001179 117.0
CMS1_k127_2823710_9 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.00000000000000000000277 110.0
CMS1_k127_2824718_0 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 3.979e-260 808.0
CMS1_k127_2824718_1 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002747 543.0
CMS1_k127_2824718_2 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 GO:0003674,GO:0003824,GO:0004595,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000188 282.0
CMS1_k127_2824718_3 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00412 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003182 265.0
CMS1_k127_2824718_4 PFAM conserved K08316 - 2.1.1.171 0.00000000000000000000000000000000000000001113 160.0
CMS1_k127_2824718_5 PFAM Rieske 2Fe-2S domain K02636 - 1.10.9.1 0.00000000000000000000000000115 117.0
CMS1_k127_2824718_6 Histidine kinase K10681 - 2.7.13.3 0.000215 44.0
CMS1_k127_2833989_0 PFAM lipopolysaccharide biosynthesis protein K16692 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000245 597.0
CMS1_k127_2833989_1 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety K12980 - - 0.0000000000000000000000003338 114.0
CMS1_k127_2841255_0 Elongation factor Tu domain 2 K02355 - - 6.649e-241 762.0
CMS1_k127_2841255_1 PFAM type II secretion system protein E K02669 - - 3.455e-199 623.0
CMS1_k127_2841255_10 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002456 316.0
CMS1_k127_2841255_11 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009682 298.0
CMS1_k127_2841255_12 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001415 291.0
CMS1_k127_2841255_13 lyase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002638 259.0
CMS1_k127_2841255_14 RNA methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000001045 235.0
CMS1_k127_2841255_15 SMART phosphoesterase PHP domain protein K07053 - 3.1.3.97 0.00000000000000000000000000000000000000000000000000000000000001307 225.0
CMS1_k127_2841255_16 May be involved in the biosynthesis of molybdopterin K03638 - 2.7.7.75 0.0000000000000000000000000000000000000000000000000000000000001294 216.0
CMS1_k127_2841255_17 gas vesicle protein - - - 0.0000008032 55.0
CMS1_k127_2841255_2 response regulator receiver K02481 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006246 611.0
CMS1_k127_2841255_3 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001607 599.0
CMS1_k127_2841255_4 PFAM AIR synthase related protein K01933 - 6.3.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002535 517.0
CMS1_k127_2841255_5 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001328 469.0
CMS1_k127_2841255_6 DNA internalization-related competence protein ComEC Rec2 K02238 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003664 420.0
CMS1_k127_2841255_7 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K02535,K13599 - 3.5.1.108 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004211 356.0
CMS1_k127_2841255_8 Calcineurin-like phosphoesterase superfamily domain K07098 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003964 349.0
CMS1_k127_2841255_9 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001966 348.0
CMS1_k127_2844932_0 aldo keto reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006984 466.0
CMS1_k127_2844932_1 Cytochrome C assembly protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008654 272.0
CMS1_k127_2844932_2 ResB-like family - - - 0.00000000000000000000000000000000000000000000000000000000000000000001834 245.0
CMS1_k127_2844932_3 oxidoreductase activity - - - 0.000000000000000000000000000000000000000000000000000000001578 207.0
CMS1_k127_2844932_4 - - - - 0.000000000000000000000000000000000000000002261 158.0
CMS1_k127_2844932_5 - - - - 0.000000000000000000000000000000000000001571 160.0
CMS1_k127_2844932_6 - - - - 0.00000000000000000000000000000539 119.0
CMS1_k127_2844932_7 amino acid K07076 - - 0.000003686 51.0
CMS1_k127_2854282_0 His Kinase A (phosphoacceptor) domain - - - 3.738e-313 983.0
CMS1_k127_2854282_1 Catalytic LigB subunit of aromatic ring-opening dioxygenase K15777 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002163 409.0
CMS1_k127_2854282_2 OsmC-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000012 275.0
CMS1_k127_2854282_3 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000000000000000000000000008923 246.0
CMS1_k127_2854282_4 Diguanylate cyclase K21084 - 2.7.7.65 0.00000000000000000000000000000000000000000000000000000000001091 225.0
CMS1_k127_2854282_5 Response regulator receiver domain - - - 0.00000000000000000000000000000000000000004481 156.0
CMS1_k127_2854282_6 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K14393 - - 0.00000000000000000000000000000000000000008771 152.0
CMS1_k127_2854282_7 solute sodium symporter, small subunit - - - 0.0000000000000000000000000000002217 127.0
CMS1_k127_2854282_8 DNA polymerase III K02342 - 2.7.7.7 0.00000000000001107 85.0
CMS1_k127_285522_0 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K13924 - 2.1.1.80,3.1.1.61 1.038e-227 730.0
CMS1_k127_285522_1 serine threonine protein kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001574 274.0
CMS1_k127_285522_2 amine dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000002583 204.0
CMS1_k127_285522_3 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) K07755 - 2.1.1.137 0.000000000000000000000000000000000000000000000000008827 187.0
CMS1_k127_285522_4 Belongs to the universal stress protein A family - - - 0.000000000000001676 82.0
CMS1_k127_285522_5 serine threonine protein kinase - - - 0.000000000007303 68.0
CMS1_k127_289349_0 DHH family K07462 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001407 402.0
CMS1_k127_289349_1 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.5.1.75 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004268 315.0
CMS1_k127_289349_2 CDP-alcohol phosphatidyltransferase K08744 - 2.7.8.41 0.000000000000000000000000000000000000000004667 161.0
CMS1_k127_289349_3 cheY-homologous receiver domain - - - 0.00000000000000000000000000000000000003887 146.0
CMS1_k127_2908887_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 GO:0003674,GO:0003824,GO:0004360,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006002,GO:0006040,GO:0006047,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0016740,GO:0016769,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.6.1.16 3.507e-279 869.0
CMS1_k127_2908887_1 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002091 579.0
CMS1_k127_2908887_10 PFAM Glucosamine-6-phosphate isomerases 6-phosphogluconolactonase K01057 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006081,GO:0006098,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009051,GO:0009117,GO:0009987,GO:0016787,GO:0016788,GO:0017057,GO:0019362,GO:0019637,GO:0019682,GO:0019693,GO:0034641,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0046496,GO:0051156,GO:0051186,GO:0052689,GO:0055086,GO:0071704,GO:0072524,GO:1901135,GO:1901360,GO:1901564 3.1.1.31 0.00000000000000000000000000000000000001211 154.0
CMS1_k127_2908887_2 PFAM 6-phosphogluconate dehydrogenase NAD-binding K00033 - 1.1.1.343,1.1.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001867 396.0
CMS1_k127_2908887_3 Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl- L-methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway K02169 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0017144,GO:0018130,GO:0019752,GO:0032259,GO:0032787,GO:0034641,GO:0042364,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.1.197 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002768 329.0
CMS1_k127_2908887_4 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) K06920 - 6.3.4.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001749 312.0
CMS1_k127_2908887_5 transcription factor binding K11527 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003588 277.0
CMS1_k127_2908887_6 PFAM glycoside hydrolase family 3 domain protein K01207 - 3.2.1.52 0.000000000000000000000000000000000000000000000000000000000000000000000000003164 259.0
CMS1_k127_2908887_7 Rubrerythrin - - - 0.0000000000000000000000000000000000000000000000000000000000000000004362 237.0
CMS1_k127_2908887_8 'Cold-shock' DNA-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000001397 214.0
CMS1_k127_2908887_9 Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring K01935 - 6.3.3.3 0.000000000000000000000000000000000000000000000000000000000004942 215.0
CMS1_k127_2911185_0 Elongator protein 3, MiaB family, Radical SAM - - - 7.259e-219 684.0
CMS1_k127_2911185_1 PFAM Radical SAM domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005947 529.0
CMS1_k127_2911185_2 Lipid A biosynthesis K02517 - 2.3.1.241 0.00000000000000000000000000000000000002392 152.0
CMS1_k127_2911185_3 Beta-ketoacyl synthase, N-terminal domain K09458 - 2.3.1.179 0.0000000000000000000000000000000000005608 145.0
CMS1_k127_2911185_4 Uncharacterized protein conserved in bacteria (DUF2062) - - - 0.0000000000000000000000000000006329 124.0
CMS1_k127_2923070_0 Protein of unknown function, DUF255 K06888 - - 3.872e-232 738.0
CMS1_k127_2923070_1 phosphate transporter K03306 GO:0003674,GO:0005215,GO:0005315,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006817,GO:0006820,GO:0008150,GO:0015291,GO:0015318,GO:0015698,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0035435,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0098656,GO:0098660,GO:0098661 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003349 385.0
CMS1_k127_2923070_2 DEAD-box RNA helicase involved in RNA degradation. Has RNA-dependent ATPase activity and unwinds double-stranded RNA K03732 - 3.6.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000004681 256.0
CMS1_k127_2923070_3 PFAM Phosphoribosyltransferase - - - 0.00000000000000000000000000000000000000000000000000000005274 204.0
CMS1_k127_2923070_4 Protein of unknown function DUF47 K07220 - - 0.000000000000000000000000000000000000000000000001576 182.0
CMS1_k127_2925665_0 Belongs to the 'phage' integrase family K04763 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006441 438.0
CMS1_k127_2925665_1 Putative transposase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001396 359.0
CMS1_k127_2925665_2 - - - - 0.000000000000000000000000000000000001433 141.0
CMS1_k127_2925665_3 Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor K00833 - 2.6.1.62 0.00000000000000000000000002072 111.0
CMS1_k127_2925665_4 - - - - 0.00000000000000000000003039 115.0
CMS1_k127_2925665_5 Putative general bacterial porin - - - 0.0000000000003887 80.0
CMS1_k127_2925665_6 lyase activity - - - 0.000000006472 68.0
CMS1_k127_296917_0 Pilus formation protein N terminal region K02280 - - 7.056e-198 629.0
CMS1_k127_296917_1 PFAM TadE family protein - - - 0.000000000000000000000000009484 114.0
CMS1_k127_296917_2 - - - - 0.000000000000000000005958 94.0
CMS1_k127_296917_3 Flp pilus assembly protein RcpC/CpaB K02279 - - 0.00000000000000006248 82.0
CMS1_k127_2979064_0 Belongs to the MtfA family K09933 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001503 293.0
CMS1_k127_2979064_1 Pfam:HipA_N K07154 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001455 295.0
CMS1_k127_2979064_2 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356,K03503 - 3.4.21.88 0.000000000000000000000000000000000000000000000000000000000000000000000000000563 261.0
CMS1_k127_2979064_3 Belongs to the 'phage' integrase family - - - 0.0000000000000000000000000000000000000001869 151.0
CMS1_k127_2979064_4 Putative ATP-dependant zinc protease - - - 0.00000000000000000000000000000000000002411 145.0
CMS1_k127_2979064_5 Helix-turn-helix domain - - - 0.000000000001609 71.0
CMS1_k127_2993724_0 Pfam:KaiC K08482 - - 1.343e-234 738.0
CMS1_k127_2993724_1 Sigma-54 interaction domain K00575 - 2.1.1.80 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006497 340.0
CMS1_k127_2993724_2 KaiB K08481 - - 0.0000000000000000000000000000000000000000001329 162.0
CMS1_k127_2993724_3 KaiB K08481 - - 0.000000000000000000000000000000000001802 141.0
CMS1_k127_3035520_0 COG0348 Polyferredoxin - - - 8.659e-233 726.0
CMS1_k127_3035520_1 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001395 541.0
CMS1_k127_3035520_2 CBS domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002002 378.0
CMS1_k127_3035520_3 PFAM peptidase S1 and S6 chymotrypsin Hap - - - 0.000000000000000000000000000000000000000000000002898 176.0
CMS1_k127_3048711_0 Protein involved in outer membrane biogenesis - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002865 389.0
CMS1_k127_3048711_1 Conserved TM helix K03442 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008167 315.0
CMS1_k127_3063266_0 ABC transporter K15738 - - 9.563e-205 652.0
CMS1_k127_3063266_1 Belongs to the alpha-IPM synthase homocitrate synthase family K01649 - 2.3.3.13 2.356e-198 630.0
CMS1_k127_3063266_2 Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage K08311 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009892,GO:0009987,GO:0010468,GO:0010605,GO:0010629,GO:0016070,GO:0016071,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0019222,GO:0019439,GO:0034353,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0060255,GO:0065007,GO:0071704,GO:0090304,GO:1901360,GO:1901361,GO:1901575 - 0.0000000000000000000000000000000000009226 143.0
CMS1_k127_3063266_3 Tellurite resistance protein TerB - - - 0.00000000000000000000000000000000004891 138.0
CMS1_k127_3063266_4 transcriptional regulator - - - 0.000000000000000000000000000000001635 134.0
CMS1_k127_3063266_5 SnoaL-like domain - - - 0.00000000000000000000005738 104.0
CMS1_k127_3063266_6 Dienelactone hydrolase family - - - 0.0000000000000000000021 96.0
CMS1_k127_3063266_8 thiolester hydrolase activity K06889 - - 0.0000001679 63.0
CMS1_k127_3080893_0 Belongs to the formate--tetrahydrofolate ligase family K01938 - 6.3.4.3 0.0 1099.0
CMS1_k127_3080893_1 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol K06131 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002261 496.0
CMS1_k127_3080893_2 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant K03465 - 2.1.1.148 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004436 445.0
CMS1_k127_3080893_3 Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine K04487 - 2.8.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001344 402.0
CMS1_k127_3080893_4 metal-dependent phosphohydrolase, HD sub domain K07814 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007453 374.0
CMS1_k127_3080893_5 Exporters of the RND superfamily K07003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000008991 295.0
CMS1_k127_3080893_6 DNA repair enzyme involved in the repair of deaminated bases. Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA K05982 - 3.1.21.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001154 286.0
CMS1_k127_3080893_7 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.00000000000000000000000000000000000000000000000000000000000000000000000000304 258.0
CMS1_k127_3082373_0 Region found in RelA / SpoT proteins K00951 - 2.7.6.5 4.773e-263 828.0
CMS1_k127_3082373_1 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 1.62e-199 647.0
CMS1_k127_3082373_2 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001378 599.0
CMS1_k127_3082373_3 PFAM Bile acid sodium symporter K03325 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005111 478.0
CMS1_k127_3082373_4 PFAM GCN5-related N-acetyltransferase K03824 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004416 273.0
CMS1_k127_3082373_5 Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA K02533,K15396 - 2.1.1.200 0.0000000000000000000000000000000000000000000000000000000000000000000000005893 256.0
CMS1_k127_3082373_6 Domain of unknown function (DUF2703) - - - 0.0000000000000000000000000000000000000000000000003166 178.0
CMS1_k127_3082373_7 PFAM Cold-shock K03704 - - 0.00000000000000000000000000000001186 127.0
CMS1_k127_3082373_8 - - - - 0.0008741 42.0
CMS1_k127_308446_0 SelR domain K12267 - 1.8.4.11,1.8.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001279 529.0
CMS1_k127_308446_1 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006461 421.0
CMS1_k127_308446_2 Two component transcriptional regulator, winged helix family K02483,K07662 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008321 315.0
CMS1_k127_3089372_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1608.0
CMS1_k127_3089372_1 Sterol-sensing domain of SREBP cleavage-activation K07003 - - 3.927e-291 917.0
CMS1_k127_3089372_10 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.000000000000000000000000000000000001594 139.0
CMS1_k127_3089372_11 - - - - 0.0000000000000000000000000001136 119.0
CMS1_k127_3089372_12 Protein of unknown function (DUF2892) - - - 0.000000000000000000000000004081 113.0
CMS1_k127_3089372_13 Helix-turn-helix domain - - - 0.000000000000000004361 85.0
CMS1_k127_3089372_2 TIGRFAM lysine 2,3-aminomutase YodO family protein K01843 - 5.4.3.2 1.572e-234 739.0
CMS1_k127_3089372_3 Receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001179 458.0
CMS1_k127_3089372_4 PFAM Outer membrane efflux protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001574 426.0
CMS1_k127_3089372_5 Outer membrane lipoprotein-sorting protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001176 320.0
CMS1_k127_3089372_6 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008537 304.0
CMS1_k127_3089372_7 Belongs to the FPP GGPP synthase family K02523,K13789 - 2.5.1.1,2.5.1.10,2.5.1.29,2.5.1.90 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003942 298.0
CMS1_k127_3089372_8 Divergent polysaccharide deacetylase K09798 - - 0.0000000000000000000000000000000000000000000000000001484 199.0
CMS1_k127_3089372_9 Protein of unknown function (DUF3373) - - - 0.00000000000000000000000000000000000000000000005669 185.0
CMS1_k127_3113522_0 NMT1-like family K02051 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000143 409.0
CMS1_k127_3113522_1 Histidine kinase A domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003624 378.0
CMS1_k127_3113522_2 4Fe-4S binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000015 334.0
CMS1_k127_3113522_3 SH3 domain - - - 0.00000000000000000000000000000000000000000000000000000001008 201.0
CMS1_k127_3113522_5 PFAM Type IV pilus assembly PilZ - - - 0.000000001097 64.0
CMS1_k127_3113522_6 LysM domain protein - - - 0.00001796 59.0
CMS1_k127_3149855_0 Histidine Phosphotransfer domain K03407 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008969 420.0
CMS1_k127_3149855_1 ABC transporter K02049 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001149 331.0
CMS1_k127_3149855_2 Binding-protein-dependent transport system inner membrane component K02050 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001788 292.0
CMS1_k127_3149855_3 CheB methylesterase K03412 - 3.1.1.61,3.5.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000127 250.0
CMS1_k127_3149855_4 PFAM Cobyrinic acid a,c-diamide synthase K03496 - - 0.00000000000000000000000000000000000000000000002477 182.0
CMS1_k127_3173394_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006698 451.0
CMS1_k127_3173394_1 E1-E2 ATPase K17686 - 3.6.3.54 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001623 370.0
CMS1_k127_3173394_2 E1-E2 ATPase K17686 - 3.6.3.54 0.000000000000000000000004918 108.0
CMS1_k127_3173394_3 PFAM Isocitrate dehydrogenase NADP-dependent monomeric type K00031 - 1.1.1.42 0.0000000000000000006816 87.0
CMS1_k127_3173394_4 E1-E2 ATPase K01533,K17686 - 3.6.3.4,3.6.3.54 0.0000000001452 67.0
CMS1_k127_3173394_5 Short C-terminal domain K08982 - - 0.0000001698 57.0
CMS1_k127_3173394_6 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.0002299 47.0
CMS1_k127_31787_0 Adenylosuccinate lyase C-terminus K01756 - 4.3.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000103 456.0
CMS1_k127_31787_1 Adenylosuccinate lyase C-terminus K01756,K01857 - 4.3.2.2,5.5.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001917 363.0
CMS1_k127_31787_2 ABC transporter, phosphonate, periplasmic substrate-binding protein - - - 0.00000000000000000000000000000000000000176 151.0
CMS1_k127_31787_3 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase K00261 - 1.4.1.3 0.0000000000000000000000000007444 119.0
CMS1_k127_31787_4 Substrate binding domain of ABC-type glycine betaine transport system - - - 0.000000000000000000000002064 111.0
CMS1_k127_31787_5 Tetratricopeptide repeat - - - 0.000156 51.0
CMS1_k127_3180771_0 PFAM 2-hydroxyglutaryl-CoA dehydratase, D-component - - - 1.044e-214 674.0
CMS1_k127_3180771_1 PFAM BadF BadG BcrA BcrD ATPase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006739 325.0
CMS1_k127_3180771_2 lipoprotein involved in nitrous oxide reduction K21601 - - 0.000000000003659 72.0
CMS1_k127_3195104_0 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 GO:0000050,GO:0000053,GO:0003674,GO:0003824,GO:0004055,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006575,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0019627,GO:0019752,GO:0034641,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:0072350,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 6.3.4.5 6.207e-228 714.0
CMS1_k127_3195104_1 TIGRFAM argininosuccinate lyase K01755 GO:0003674,GO:0003824,GO:0004056,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016829,GO:0016840,GO:0016842,GO:0019752,GO:0042450,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.3.2.1 7.91e-200 632.0
CMS1_k127_3195104_10 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 - 2.2.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002329 310.0
CMS1_k127_3195104_11 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001587 311.0
CMS1_k127_3195104_12 Pfam Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001461 305.0
CMS1_k127_3195104_13 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995 - 2.7.8.5 0.00000000000000000000000000000000000000000000000000000000000000000000000504 247.0
CMS1_k127_3195104_14 PFAM Transglycosylase SLT domain K08309 - - 0.000000000000000000000000000000000000000000005305 171.0
CMS1_k127_3195104_15 OstA-like protein K09774 - - 0.00000000000000000000000000000001274 134.0
CMS1_k127_3195104_16 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 - 2.7.6.3 0.0000000000000000000000000000001265 134.0
CMS1_k127_3195104_17 Uncharacterized protein conserved in bacteria (DUF2058) K09912 - - 0.0000000000000000000000001682 112.0
CMS1_k127_3195104_18 Fibronectin, type III domain - - - 0.00000000000000000000000017 111.0
CMS1_k127_3195104_19 Sigma-54 factor, Activator interacting domain (AID) K03092 - - 0.00000000000000006654 81.0
CMS1_k127_3195104_2 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008607 604.0
CMS1_k127_3195104_20 monooxygenase activity - - - 0.00000000004313 68.0
CMS1_k127_3195104_21 Transposase - - - 0.0000000002618 61.0
CMS1_k127_3195104_22 Autoinducer synthase K13060 - 2.3.1.184 0.000002702 50.0
CMS1_k127_3195104_24 Transposase - - - 0.0002845 44.0
CMS1_k127_3195104_3 TIGRFAM acetylornithine and succinylornithine K00821 - 2.6.1.11,2.6.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009384 556.0
CMS1_k127_3195104_4 Aminotransferase class I and II K10206 - 2.6.1.83 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001322 534.0
CMS1_k127_3195104_5 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 GO:0003674,GO:0003824,GO:0003991,GO:0005488,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016597,GO:0016740,GO:0016772,GO:0016774,GO:0019752,GO:0031406,GO:0034618,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001524 463.0
CMS1_k127_3195104_6 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611,K09065 GO:0000050,GO:0003674,GO:0003824,GO:0004585,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0016743,GO:0019627,GO:0019752,GO:0034641,GO:0042450,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.3.3,2.1.3.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008526 449.0
CMS1_k127_3195104_7 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000114 439.0
CMS1_k127_3195104_8 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008839,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016627,GO:0016628,GO:0019752,GO:0019877,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576 1.17.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008838 396.0
CMS1_k127_3195104_9 PFAM ABC transporter K06861 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004561 349.0
CMS1_k127_3201137_0 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 6.208e-284 876.0
CMS1_k127_3201137_1 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by K00053 - 1.1.1.86 5.312e-267 827.0
CMS1_k127_3201137_2 PFAM ABC transporter K06158 - - 4.795e-244 771.0
CMS1_k127_3201137_3 LysR substrate binding domain K02521 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007333 476.0
CMS1_k127_3201137_4 Isoprenylcysteine carboxyl methyltransferase (ICMT) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001655 396.0
CMS1_k127_3201137_5 - - - - 0.00000000000000000000000000000000000000000000000000000001719 199.0
CMS1_k127_3201137_6 Domain of unknown function (DUF362) - - - 0.000000000000000000000000002969 114.0
CMS1_k127_3201137_7 sulfuric ester hydrolase activity K03760,K19353 - 2.7.8.43 0.000000000000000000005855 98.0
CMS1_k127_3201137_8 homolog of gamma-carboxymuconolactone decarboxylase subunit - - - 0.00001242 49.0
CMS1_k127_3201137_9 homolog of gamma-carboxymuconolactone decarboxylase subunit - - - 0.0002586 47.0
CMS1_k127_321938_0 glycosyl transferase group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002004 488.0
CMS1_k127_321938_1 Glycosyl transferase group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005235 352.0
CMS1_k127_321938_2 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 - 1.1.1.133 0.00000000000000000000000000000000000000000000000000195 186.0
CMS1_k127_3229095_0 CBS domain K00974 - 2.7.7.72 0.0 1074.0
CMS1_k127_3229095_1 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 6.264e-199 627.0
CMS1_k127_3229095_10 molybdopterin-guanine dinucleotide biosynthesis protein K03753 - - 0.0000000000000000000000000000000000000000000000000000000000000000000137 239.0
CMS1_k127_3229095_11 PFAM type II secretion system K02455 - - 0.0000000000000000000000000000000000000000000000000000000002235 218.0
CMS1_k127_3229095_12 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.00000000000000000000000000000000000000000000001402 177.0
CMS1_k127_3229095_13 Scavenger mRNA decapping enzyme C-term binding K02503 - - 0.0000000000000000000000000000000000000000000000797 170.0
CMS1_k127_3229095_14 PFAM DsrE DsrF-like family - - - 0.000000000000000000000000000000000000000000005846 165.0
CMS1_k127_3229095_15 Sulfurtransferase TusA - - - 0.000000000000000000000000000000000000005929 146.0
CMS1_k127_3229095_17 - - - - 0.000000000000000000000000000000001437 132.0
CMS1_k127_3229095_2 PFAM FAD linked oxidase domain protein K00104 - 1.1.3.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004379 529.0
CMS1_k127_3229095_21 Type II secretion system (T2SS), protein K K02460 - - 0.0000000000000000002491 99.0
CMS1_k127_3229095_22 structural constituent of ribosome K02970 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000001384 87.0
CMS1_k127_3229095_23 PilZ domain - - - 0.0000000000000005805 84.0
CMS1_k127_3229095_24 Ferritin-like domain - - - 0.000000000000005101 86.0
CMS1_k127_3229095_25 TIGRFAM general secretion pathway protein H K02457 - - 0.000001054 56.0
CMS1_k127_3229095_3 Sulphur transport K07112 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001455 521.0
CMS1_k127_3229095_4 Type II IV secretion system protein K02652 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009605 494.0
CMS1_k127_3229095_5 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006755 418.0
CMS1_k127_3229095_6 TIGRFAM tyrosine recombinase XerD K03733,K04763 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006807 355.0
CMS1_k127_3229095_7 Type II and III secretion system protein K02453 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001265 293.0
CMS1_k127_3229095_8 TIGRFAM molybdenum cofactor synthesis domain K03750 - 2.10.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000001238 278.0
CMS1_k127_3229095_9 Peptidase family M50 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001512 244.0
CMS1_k127_3233667_0 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 GO:0003674,GO:0003824,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016879,GO:0016884,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0050567,GO:0070681,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.3.5.6,6.3.5.7 4.182e-228 714.0
CMS1_k127_3233667_1 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007622 600.0
CMS1_k127_3233667_2 Involved in the biosynthesis of porphyrin-containing compound - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001439 364.0
CMS1_k127_3233667_3 Belongs to the UPF0758 family K03630 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005736 299.0
CMS1_k127_3233667_4 Putative exonuclease, RdgC - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001411 246.0
CMS1_k127_3233667_5 May be involved in recombination - - - 0.0000000000000000000000000000000000000000000000000000000000000000003585 233.0
CMS1_k127_3233667_6 Belongs to the 'phage' integrase family - - - 0.0000000000000000000000002375 108.0
CMS1_k127_3235151_0 Glutathione synthase ribosomal protein S6 modification enzyme (Glutaminyl transferase) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002182 475.0
CMS1_k127_3235151_1 MlaD protein - - - 0.000000000006883 75.0
CMS1_k127_323913_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001085 471.0
CMS1_k127_323913_1 Export protein (LysE) - - - 0.000000000000000000000000005074 117.0
CMS1_k127_3243552_0 domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000002713 237.0
CMS1_k127_3243552_1 Peptidase dimerisation domain K01438,K01439 - 3.5.1.16,3.5.1.18 0.0000000000000000000000000000000000000000000000000000202 203.0
CMS1_k127_3243552_2 HAD-superfamily hydrolase subfamily IA, variant 3 K07025 - - 0.0000000000000000000000000000000000000000000000000003763 191.0
CMS1_k127_3243552_3 EamA-like transporter family K08978 - - 0.00000000000000000000000000000009792 128.0
CMS1_k127_3243552_4 Mut7-C RNAse domain K09122 - - 0.00003019 51.0
CMS1_k127_3265426_0 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002388 615.0
CMS1_k127_3265426_1 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 GO:0000105,GO:0003674,GO:0003824,GO:0004399,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0052803,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005657 578.0
CMS1_k127_3265426_2 NfeD-like C-terminal, partner-binding K07403 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000153 515.0
CMS1_k127_3265426_3 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004208 484.0
CMS1_k127_3265426_4 Specifically methylates the N7 position of guanine in position 527 of 16S rRNA K03501 - 2.1.1.170 0.00000000000000000000000000000000000000000001577 170.0
CMS1_k127_3299545_0 Flavin containing amine oxidoreductase - - - 4.054e-229 716.0
CMS1_k127_3299545_1 Enoyl-(Acyl carrier protein) reductase K00208 - 1.3.1.10,1.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007393 395.0
CMS1_k127_3299545_2 Short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004783 314.0
CMS1_k127_3299545_3 PFAM 3-Oxoacyl- acyl-carrier-protein (ACP) synthase III K22317 - - 0.000000000000000000000000000000000000000000000000001531 184.0
CMS1_k127_3299545_4 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 - 4.2.1.59 0.00000000000000000000000000000000000000000000004147 173.0
CMS1_k127_334336_0 racemase activity, acting on amino acids and derivatives - - - 0.000000000000000000000000000000000000000000000000001857 192.0
CMS1_k127_334336_1 Belongs to the binding-protein-dependent transport system permease family - - - 0.0000000000000000000000000001238 123.0
CMS1_k127_3346421_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470,K02622 - 5.99.1.3 1.282e-310 960.0
CMS1_k127_3346421_1 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02621 - - 6.861e-295 917.0
CMS1_k127_3346421_2 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03767,K03768 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000002367 198.0
CMS1_k127_3346421_3 acetyltransferase - - - 0.000000000000000000000000000000000000000000000383 174.0
CMS1_k127_3346421_4 Rubrerythrin - - - 0.0000000000000000001618 90.0
CMS1_k127_3347418_0 Alpha amylase, catalytic domain K01176 - 3.2.1.1 1.081e-308 956.0
CMS1_k127_3347418_1 Domain of unknown function (DUF3333) K02038 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003209 590.0
CMS1_k127_3347418_2 PBP superfamily domain K02040 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002978 526.0
CMS1_k127_3347418_3 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009259 447.0
CMS1_k127_3347418_4 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000019 378.0
CMS1_k127_3347418_5 PFAM response regulator receiver K07657 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005911 293.0
CMS1_k127_3347418_6 Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases. - - - 0.00000000000000000000003683 103.0
CMS1_k127_33655_0 Polysaccharide deacetylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005792 340.0
CMS1_k127_33655_1 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase K03796 - - 0.00000000000000000000000000000000000000000000000000000000000009661 227.0
CMS1_k127_33655_2 Glycine zipper 2TM domain - - - 0.0000000000000000000000000000000000001907 146.0
CMS1_k127_3366246_0 PFAM Radical SAM domain protein K06871 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001311 419.0
CMS1_k127_3366246_1 TonB dependent receptor K16092 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000968 419.0
CMS1_k127_3366246_2 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000002982 206.0
CMS1_k127_3366246_3 ABC transporter substrate binding protein K01989 - - 0.000000000000000000000000000000000000000000000008424 184.0
CMS1_k127_3366246_4 - - - - 0.0000000001027 63.0
CMS1_k127_3368444_0 Pyruvate phosphate dikinase, PEP K01006 - 2.7.9.1 0.0 1848.0
CMS1_k127_3368444_1 TIGRFAM anaerobic ribonucleoside-triphosphate reductase K21636 - 1.1.98.6 0.0 1078.0
CMS1_k127_3368444_10 - - - - 0.0000000000000000000000000003812 115.0
CMS1_k127_3368444_11 Acylphosphatase K01512 - 3.6.1.7 0.0000000000000000000002517 99.0
CMS1_k127_3368444_12 Tautomerase enzyme K01821 - 5.3.2.6 0.000000000000000002612 86.0
CMS1_k127_3368444_13 Hemerythrin HHE cation binding domain K07216 - - 0.0000000000000003322 83.0
CMS1_k127_3368444_14 - - - - 0.0000000000000124 77.0
CMS1_k127_3368444_2 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 - 6.5.1.2 7.799e-216 689.0
CMS1_k127_3368444_3 PFAM CobQ CobB MinD ParA nucleotide binding domain K03496 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002532 342.0
CMS1_k127_3368444_4 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001129 315.0
CMS1_k127_3368444_5 ligase activity K05844 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000107 274.0
CMS1_k127_3368444_6 Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor K03524 - 6.3.4.15 0.000000000000000000000000000000000000000000000000000000000000007803 228.0
CMS1_k127_3368444_7 TIGRFAM sulfur relay protein, TusE DsrC DsvC family K11179 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000004538 205.0
CMS1_k127_3368444_8 TIGRFAM anaerobic ribonucleoside-triphosphate reductase activating protein K04069 - 1.97.1.4 0.0000000000000000000000000000000000000000000000000000001757 201.0
CMS1_k127_3368444_9 Belongs to the ParB family K03497 - - 0.0000000000000000000000000000000000000000000002308 172.0
CMS1_k127_3375651_0 Belongs to the precorrin methyltransferase family K02302,K02303,K13542 - 1.3.1.76,2.1.1.107,4.2.1.75,4.99.1.4 2.3e-220 694.0
CMS1_k127_3375651_1 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 GO:0003674,GO:0003824,GO:0004418,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005415 421.0
CMS1_k127_3375651_2 Belongs to the NadC ModD family K00767 - 2.4.2.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002568 332.0
CMS1_k127_3375651_3 peptidyl-lysine modification to peptidyl-hypusine - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001652 270.0
CMS1_k127_3375651_4 DSBA-like thioredoxin domain - - - 0.000000000000000000000000000000001341 136.0
CMS1_k127_3375651_5 TIGRFAM DJ-1 family protein K03152 - 3.5.1.124 0.000000000000001825 77.0
CMS1_k127_3375651_6 TIGRFAM regulatory protein, FmdB - - - 0.0000000000005245 71.0
CMS1_k127_3375651_7 - - - - 0.0007058 43.0
CMS1_k127_3377167_0 TIGRFAM flagellar hook-associated protein FlgK K02396 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003709 330.0
CMS1_k127_3377167_1 - - - - 0.000000000000000000000000000000000000000000000000000253 191.0
CMS1_k127_3377167_2 - - - - 0.0000000000000000000000000000000000000001003 153.0
CMS1_k127_3377167_3 CopG antitoxin of type II toxin-antitoxin system - - - 0.0000000000000000000000002814 107.0
CMS1_k127_3377167_4 Anti-sigma-28 factor, FlgM K02398 - - 0.00000000000000000001344 94.0
CMS1_k127_3390164_0 sigma-54 factor interaction domain-containing protein K02667 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003706 580.0
CMS1_k127_3390164_1 Involved in the TonB-independent uptake of proteins K03641 GO:0003674,GO:0005215,GO:0006810,GO:0008150,GO:0019534,GO:0022857,GO:0051179,GO:0051234,GO:0055085,GO:1901998 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000045 480.0
CMS1_k127_3390164_2 His Kinase A (phosphoacceptor) domain K02668 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001137 358.0
CMS1_k127_3390164_3 PFAM MotA TolQ ExbB proton channel K03561,K03562 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004237 252.0
CMS1_k127_3390164_4 PFAM Biopolymer transport protein ExbD TolR K03560 - - 0.0000000000000000000000000000000000000000000003301 170.0
CMS1_k127_3390164_5 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.000000000000000000000000000000000000000000009238 177.0
CMS1_k127_3390164_6 TonB C terminal K03646,K03832 - - 0.000000000000000000004531 104.0
CMS1_k127_3390164_7 PFAM homoserine dehydrogenase K00003 - 1.1.1.3 0.000000002917 60.0
CMS1_k127_3416594_0 Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose K01711 - 4.2.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003691 600.0
CMS1_k127_3416594_1 Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose K01711 - 4.2.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001659 394.0
CMS1_k127_3416594_2 Mannose-6-phosphate isomerase K00971,K16011 - 2.7.7.13,5.3.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009312 341.0
CMS1_k127_3416594_3 glycosyl transferase group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001946 319.0
CMS1_k127_3416594_4 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000005086 169.0
CMS1_k127_3433314_0 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 5.182e-200 633.0
CMS1_k127_3433314_1 Belongs to the phosphoglycerate kinase family K00927 - 2.7.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006494 604.0
CMS1_k127_3433314_2 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001807 345.0
CMS1_k127_3433314_3 NGG1p interacting factor 3 K22391 - 3.5.4.16 0.0000000000000000000000000000000000000000000000000000000000000000000000001083 257.0
CMS1_k127_3433314_4 C4-type zinc ribbon domain K07164 - - 0.0000000000000000000000000000000000000000000000007698 185.0
CMS1_k127_3433314_5 PFAM Preprotein translocase SecG subunit K03075 - - 0.000000000000000000000000000001934 124.0
CMS1_k127_3433314_6 - - - - 0.0000000000114 72.0
CMS1_k127_3433314_7 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770,K12506 - 2.7.7.60,4.6.1.12 0.00000000008473 64.0
CMS1_k127_3433314_8 - - - - 0.0000598 46.0
CMS1_k127_3472950_0 Aminotransferase class I and II - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008714 597.0
CMS1_k127_3472950_1 Nucleotidyl transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001175 386.0
CMS1_k127_3472950_2 CDP-alcohol phosphatidyltransferase K17103 - 2.7.8.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001524 302.0
CMS1_k127_348032_0 pfkB family carbohydrate kinase K00856 - 2.7.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002165 492.0
CMS1_k127_348032_1 AAA domain K07028 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001218 367.0
CMS1_k127_348032_2 Belongs to the nitrite and sulfite reductase 4Fe-4S domain family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009882 311.0
CMS1_k127_348032_3 NIL - - - 0.00000000000000000000000000000000000000000000000000006057 190.0
CMS1_k127_348032_4 AAA domain K00663,K00851,K07028 GO:0003674,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0008150,GO:0009987,GO:0030312,GO:0044464,GO:0044764,GO:0046812,GO:0051704,GO:0071944 2.3.1.82,2.7.1.12 0.00000000000000000000000000001255 126.0
CMS1_k127_348032_5 Haemolysin-III related K11068 - - 0.00000000004919 64.0
CMS1_k127_348032_7 PFAM ferredoxin - - - 0.00009549 48.0
CMS1_k127_348032_8 cyclic nucleotide binding K10914 - - 0.0003892 52.0
CMS1_k127_3482207_0 Heavy metal transport detoxification protein K17686 - 3.6.3.54 2.593e-320 1000.0
CMS1_k127_3482207_1 Elongator protein 3, MiaB family, Radical SAM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004258 553.0
CMS1_k127_3482207_10 Endonuclease containing a URI domain K07461 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004527,GO:0004529,GO:0004536,GO:0006139,GO:0006259,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008296,GO:0008408,GO:0009987,GO:0016787,GO:0016788,GO:0016796,GO:0016895,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360 - 0.000000000000000000003162 95.0
CMS1_k127_3482207_11 PFAM Heavy metal transport detoxification protein K07213 - - 0.000000000000000034 82.0
CMS1_k127_3482207_12 Protein of unknown function (DUF493) K09158 - - 0.0000000000000002846 81.0
CMS1_k127_3482207_2 Protein tyrosine kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002513 344.0
CMS1_k127_3482207_3 3D domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000006755 258.0
CMS1_k127_3482207_4 4Fe-4S binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003221 247.0
CMS1_k127_3482207_5 Glucose / Sorbosone dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000003744 207.0
CMS1_k127_3482207_6 peptidyl-prolyl cis-trans isomerase K01802 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000005516 200.0
CMS1_k127_3482207_7 Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases. - - - 0.00000000000000000000000000000000000000000000004606 177.0
CMS1_k127_3482207_8 Doubled CXXCH motif (Paired_CXXCH_1) - - - 0.000000000000000000000000000000000000000000007571 179.0
CMS1_k127_3482207_9 DsrC like protein K11179 - - 0.00000000000000000000000000000000000000000001717 164.0
CMS1_k127_3485925_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 5e-324 998.0
CMS1_k127_3485925_1 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01945 - 6.3.4.13 1.487e-259 812.0
CMS1_k127_3485925_10 PFAM Phosphatidylethanolamine-binding protein K06910 - - 0.000000000000000000000000000000000000000000000000000000000000000000001675 240.0
CMS1_k127_3485925_11 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.0000000000000000000000000000000000000000000000000000000000000000004107 232.0
CMS1_k127_3485925_12 Necessary for normal cell division and for the maintenance of normal septation K03978 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000006284 235.0
CMS1_k127_3485925_13 PFAM Phosphomethylpyrimidine kinase K00941,K14153,K21219 - 2.5.1.3,2.7.1.49,2.7.4.7 0.00000000000000000000000000000000000000000000000000000004083 206.0
CMS1_k127_3485925_14 TIGRFAM Sua5 YciO YrdC YwlC family protein K07566 - 2.7.7.87 0.000000000000000000000000000000000000000000000000000002023 201.0
CMS1_k127_3485925_15 Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP K01496,K11755 - 3.5.4.19,3.6.1.31 0.000000000000000000000000000000000000000000000000000002718 196.0
CMS1_k127_3485925_16 - - - - 0.0000000000000000000000000000000000000000000004299 173.0
CMS1_k127_3485925_17 ATP synthase subunit D K02120 - - 0.00000000000000000000000000000000000000000001118 169.0
CMS1_k127_3485925_18 Peptidyl-prolyl cis-trans isomerase K01802,K03774,K03775 - 5.2.1.8 0.00000000000000000000000000000000000000000008571 164.0
CMS1_k127_3485925_19 - - - - 0.0000000000000000000000002548 112.0
CMS1_k127_3485925_2 ATPsynthase alpha/beta subunit N-term extension K02117 - 3.6.3.14,3.6.3.15 7.473e-221 697.0
CMS1_k127_3485925_20 Produces ATP from ADP in the presence of a proton gradient across the membrane K02122 - - 0.0000000000000000000008817 98.0
CMS1_k127_3485925_21 PFAM H transporting two-sector ATPase C subunit K02124 - - 0.000000000000000000001346 101.0
CMS1_k127_3485925_22 Produces ATP from ADP in the presence of a proton gradient across the membrane K02121 - - 0.00000000000000004044 88.0
CMS1_k127_3485925_23 - - - - 0.0000000000000001049 82.0
CMS1_k127_3485925_24 Domain of unknown function (DUF4384) - - - 0.000000000000001863 85.0
CMS1_k127_3485925_26 PFAM TPR repeat-containing protein - - - 0.0000004626 64.0
CMS1_k127_3485925_28 - - - - 0.0001569 48.0
CMS1_k127_3485925_3 Belongs to the DegT DnrJ EryC1 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005788 513.0
CMS1_k127_3485925_4 ATP phosphoribosyltransferase K00765 GO:0000105,GO:0003674,GO:0003824,GO:0003879,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003948 484.0
CMS1_k127_3485925_5 Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal beta chain is a regulatory subunit K02118 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003022 481.0
CMS1_k127_3485925_6 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086,K03089 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004902 451.0
CMS1_k127_3485925_7 PFAM V-type ATPase 116 kDa K02123 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001059 449.0
CMS1_k127_3485925_8 Tetracycline transcriptional regulator YsiA domain protein K13770 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000395 283.0
CMS1_k127_3485925_9 TIGRFAM cation diffusion facilitator family transporter K16264 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006205 288.0
CMS1_k127_3505474_0 GDP-mannose 4,6 dehydratase - - - 5.264e-206 644.0
CMS1_k127_3505474_1 Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction K02377 - 1.1.1.271 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005246 485.0
CMS1_k127_3505474_2 ADP-glyceromanno-heptose 6-epimerase activity - - - 0.0001812 44.0
CMS1_k127_3544340_0 AIR carboxylase K06898 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001832 284.0
CMS1_k127_3544340_1 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.0000000000000000000000000000000000000000000000000000000000000006507 227.0
CMS1_k127_3544340_2 Methylates ribosomal protein L11 K02687 - - 0.000000000000000000000000000000000000000000000000000000000000003828 227.0
CMS1_k127_3544340_3 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 GO:0002161,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006399,GO:0006450,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0034641,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0051499,GO:0051500,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:1901360 - 0.0000000000000000000000000000000000000000000000000000002998 199.0
CMS1_k127_3544340_4 Adenylate and Guanylate cyclase catalytic domain - - - 0.00000000000000000000000000000000000000000007189 168.0
CMS1_k127_3544340_5 - - - - 0.000000003487 59.0
CMS1_k127_3560202_0 Sigma-54 interaction domain K07714,K07715 - - 3.843e-201 634.0
CMS1_k127_3560202_1 Cytochrome c K16966,K17049,K17052 GO:0005575,GO:0005623,GO:0042597,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002134 278.0
CMS1_k127_3589765_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 2.882e-278 863.0
CMS1_k127_3589765_1 PFAM AICARFT IMPCHase bienzyme K00602 - 2.1.2.3,3.5.4.10 1.366e-244 759.0
CMS1_k127_3589765_10 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001637 270.0
CMS1_k127_3589765_11 haloacid dehalogenase-like hydrolase K03270 - 3.1.3.45 0.0000000000000000000000000000000000000000000000000000000000000000000000002029 252.0
CMS1_k127_3589765_12 PFAM ribosomal protein L17 K02879 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000333 192.0
CMS1_k127_3589765_13 PFAM Protein-tyrosine phosphatase, low molecular weight K03741 - 1.20.4.1 0.000000000000000000000000000000000000000000000000000004591 194.0
CMS1_k127_3589765_14 Protein of unknown function (DUF3750) - - - 0.000000000000000000000000000000000000000000000000000007252 192.0
CMS1_k127_3589765_15 lipopolysaccharide transmembrane transporter activity K09774,K11719 - - 0.0000000000000000003965 94.0
CMS1_k127_3589765_16 thiamine biosynthesis protein ThiS K03154 - - 0.0000000004745 62.0
CMS1_k127_3589765_2 Biotin and Thiamin Synthesis associated K03150 - 4.1.99.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009601 482.0
CMS1_k127_3589765_3 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001543 447.0
CMS1_k127_3589765_4 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 2.7.7.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007371 414.0
CMS1_k127_3589765_5 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005815 421.0
CMS1_k127_3589765_6 3-deoxy-D-manno-octulosonic acid 8-phosphate synthase K01627 - 2.5.1.55 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001587 395.0
CMS1_k127_3589765_7 Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S K03149 GO:0003674,GO:0003824,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.8.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002049 388.0
CMS1_k127_3589765_8 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 GO:0003674,GO:0003824,GO:0004590,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006206,GO:0006207,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019856,GO:0034641,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046112,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001552 367.0
CMS1_k127_3589765_9 ThiS-like ubiquitin K03148 - 2.7.7.73 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001382 290.0
CMS1_k127_359905_0 Amino acid permease - - - 1.58e-271 846.0
CMS1_k127_359905_1 Citrate transporter - - - 1.365e-250 788.0
CMS1_k127_359905_10 - - - - 0.0000000000000000000000000000000000000000000000000589 187.0
CMS1_k127_359905_11 Sulfite exporter TauE/SafE K07090 - - 0.0000000000000000000000000000000000000000000001985 169.0
CMS1_k127_359905_12 Putative transmembrane protein (Alph_Pro_TM) - - - 0.0000000000000000000000000000000000000000001056 169.0
CMS1_k127_359905_13 Belongs to the Nudix hydrolase family K01518 - 3.6.1.17 0.00000000000000000000003005 102.0
CMS1_k127_359905_14 Na H antiporter - - - 0.000000000000000006561 85.0
CMS1_k127_359905_15 Belongs to the Nudix hydrolase family K01518 - 3.6.1.17 0.00000000000001689 74.0
CMS1_k127_359905_16 Protein of unknown function (DUF3365) - - - 0.00000000000002103 81.0
CMS1_k127_359905_17 3-demethylubiquinone-9 3-methyltransferase - - - 0.00000000000006908 72.0
CMS1_k127_359905_18 amino acid - - - 0.0000001686 54.0
CMS1_k127_359905_2 PEP-utilising enzyme, mobile domain K01007 - 2.7.9.2 1.851e-244 781.0
CMS1_k127_359905_3 Na H antiporter - - - 1.414e-232 727.0
CMS1_k127_359905_4 Bacterial regulatory protein, Fis family K07713 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005986 596.0
CMS1_k127_359905_5 Sulfite exporter TauE/SafE K07090 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002139 458.0
CMS1_k127_359905_6 membrane transporter protein K07090 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001455 420.0
CMS1_k127_359905_7 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000291 392.0
CMS1_k127_359905_8 response regulator, receiver - - - 0.000000000000000000000000000000000000000000000000000007825 191.0
CMS1_k127_359905_9 Universal stress protein family - - - 0.0000000000000000000000000000000000000000000000000001518 196.0
CMS1_k127_3600646_0 Belongs to the UbiD family K03182 - 4.1.1.98 8.621e-279 868.0
CMS1_k127_3600646_1 Molecular chaperone. Has ATPase activity K04079 - - 5.983e-269 840.0
CMS1_k127_3600646_10 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002185 270.0
CMS1_k127_3600646_11 heme-binding sites - - - 0.00000000000000000000000000000000000000000000000000000007557 201.0
CMS1_k127_3600646_12 Probably functions as a manganese efflux pump - - - 0.0000000000000000000000000000000000000000000000000001426 192.0
CMS1_k127_3600646_13 TIGRFAM secondary thiamine-phosphate synthase enzyme - - - 0.00000000000000000000000000000000000000000000001119 174.0
CMS1_k127_3600646_14 Domain of Unknown Function (DUF349) - - - 0.00000000000000000000000000000000000000000001686 187.0
CMS1_k127_3600646_15 Belongs to the pseudouridine synthase RsuA family K06178,K06183 - 5.4.99.19,5.4.99.22 0.0000000000000000000000000000000000002818 143.0
CMS1_k127_3600646_16 lipolytic protein G-D-S-L family - - - 0.0000000000000000000000000000000001271 139.0
CMS1_k127_3600646_18 Divalent ion tolerance protein K03926 - - 0.0000000000000000004875 101.0
CMS1_k127_3600646_19 - - - - 0.00000000000000004649 83.0
CMS1_k127_3600646_2 Belongs to the glycosyl hydrolase 13 family K01214 - 3.2.1.68 1.116e-235 748.0
CMS1_k127_3600646_20 Rhodanese Homology Domain - - - 0.0000000000000005154 85.0
CMS1_k127_3600646_3 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 - 4.1.99.17 1.471e-231 722.0
CMS1_k127_3600646_4 Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation K06147,K18890 - - 4.72e-222 705.0
CMS1_k127_3600646_5 Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation K06147,K18889 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006664 619.0
CMS1_k127_3600646_6 cytochrome complex assembly - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005436 387.0
CMS1_k127_3600646_7 protein kinase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000501 344.0
CMS1_k127_3600646_8 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005308 296.0
CMS1_k127_3600646_9 endonuclease III K07457 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000131 257.0
CMS1_k127_3618074_0 Serine protein kinase K07180 - - 0.0 1214.0
CMS1_k127_3618074_1 Serine dehydratase alpha chain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004148 602.0
CMS1_k127_3618074_2 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002408 297.0
CMS1_k127_3618074_3 YheO-like PAS domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000007859 243.0
CMS1_k127_3618074_4 PFAM Endoribonuclease L-PSP K09022 - 3.5.99.10 0.00000000000000000000000000000000000000001514 156.0
CMS1_k127_3622556_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 GO:0005575,GO:0005622,GO:0005623,GO:0006950,GO:0006974,GO:0008150,GO:0009380,GO:0009987,GO:0032991,GO:0033554,GO:0044424,GO:0044464,GO:0050896,GO:0051716,GO:1902494,GO:1905347,GO:1905348,GO:1990391 - 1.219e-199 639.0
CMS1_k127_3622556_1 Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine K04487 - 2.8.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002354 473.0
CMS1_k127_3622556_2 May be involved in the formation or repair of Fe-S clusters present in iron-sulfur proteins K04488,K13819 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001101 428.0
CMS1_k127_3623445_0 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 - 4.2.1.20 9.001e-224 697.0
CMS1_k127_3623445_1 protein histidine kinase activity K07315 - 3.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000004269 242.0
CMS1_k127_3623445_2 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.0000000000000000000000000000000001308 136.0
CMS1_k127_3636216_0 histidine kinase HAMP region domain protein K13598 - 2.7.13.3 1.101e-268 846.0
CMS1_k127_3636216_1 Belongs to the aconitase IPM isomerase family K01682 - 4.2.1.3,4.2.1.99 7.733e-247 771.0
CMS1_k127_3636216_10 PAS fold - - - 0.00000000000001397 86.0
CMS1_k127_3636216_2 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 3.491e-215 680.0
CMS1_k127_3636216_3 response regulator receiver K13599 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001183 602.0
CMS1_k127_3636216_4 Belongs to the ClpX chaperone family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005503 598.0
CMS1_k127_3636216_5 Belongs to the ALAD family K01698 - 4.2.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005951 544.0
CMS1_k127_3636216_6 Protein of unknown function DUF89 K09116 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001616 258.0
CMS1_k127_3636216_7 Elongation factor SelB winged helix K03833 - - 0.00000000000000000000000000000000000000000000000000005254 192.0
CMS1_k127_3636216_8 response regulator receiver - - - 0.0000000000000000000000000000000000000000000000000001349 202.0
CMS1_k127_3636216_9 Domain of unknown function (DUF4390) - - - 0.000000000000000000000000000000004326 137.0
CMS1_k127_3648225_0 response regulator, receiver - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001281 388.0
CMS1_k127_3648225_1 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000762 140.0
CMS1_k127_3648225_2 protein containing a von Willebrand factor type A (vWA) domain K07114 - - 0.0000000000000000002959 99.0
CMS1_k127_3653942_0 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002598 604.0
CMS1_k127_3653942_1 Iron-containing alcohol dehydrogenase K00001,K08325 - 1.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006339 529.0
CMS1_k127_3653942_2 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002421 501.0
CMS1_k127_3653942_3 Protein of unknown function (DUF1343) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000122 502.0
CMS1_k127_3653942_4 PFAM Cobyrinic acid ac-diamide synthase K07321 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001733 324.0
CMS1_k127_3653942_5 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0016740,GO:0016741,GO:0018364,GO:0019538,GO:0032259,GO:0036009,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0140096,GO:1901564 2.1.1.297 0.00000000000000000000000000000000000000000000000000000000000002321 225.0
CMS1_k127_3653942_6 Binds the 23S rRNA K02909 - - 0.00000000000000000000000000000007938 124.0
CMS1_k127_3672002_0 Catalyzes carboxymethyl transfer from carboxy-S- adenosyl-L-methionine (Cx-SAM) to 5-hydroxyuridine (ho5U) to form 5-carboxymethoxyuridine (cmo5U) at position 34 in tRNAs K15257 - - 0.00000000000000000000000000000000000000000000000000000000000000006232 224.0
CMS1_k127_3672002_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000002625 227.0
CMS1_k127_3672002_2 Mycolic acid cyclopropane synthetase - - - 0.0000000000000000000000000000000000000000000000007467 182.0
CMS1_k127_3672002_3 Small Multidrug Resistance protein K03297 - - 0.000000000000000000000000000000000000000001687 157.0
CMS1_k127_3672002_5 Catalyzes carboxymethyl transfer from carboxy-S- adenosyl-L-methionine (Cx-SAM) to 5-hydroxyuridine (ho5U) to form 5-carboxymethoxyuridine (cmo5U) at position 34 in tRNAs K15257 GO:0002097,GO:0002098,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016740,GO:0016741,GO:0016765,GO:0022607,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042802,GO:0043170,GO:0043412,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0065003,GO:0071704,GO:0071840,GO:0090304,GO:1901360 - 0.00009613 48.0
CMS1_k127_3678971_0 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009529 311.0
CMS1_k127_3678971_1 L11 methyltransferase K02687 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001575 305.0
CMS1_k127_3678971_2 Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family K00655 - 2.3.1.51 0.0000000000000000000000000000000000000000000000000000000000000000000000000001149 263.0
CMS1_k127_3678971_3 PFAM peptidase U61 LD-carboxypeptidase A K01297 - 3.4.17.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000235 263.0
CMS1_k127_3678971_4 AP2 domain - - - 0.00000000000000000000000000000000000000000000000000007947 190.0
CMS1_k127_3678971_5 - - - - 0.0000000000000000000000000000002552 123.0
CMS1_k127_3678971_6 Peptidase family M23 - - - 0.00000000000000000000000000004621 123.0
CMS1_k127_3678971_7 Sodium/hydrogen exchanger family K03316 - - 0.0000000000000000003322 87.0
CMS1_k127_3678971_8 Peptidoglycan-binding domain 1 protein K01185 - 3.2.1.17 0.000000000002794 70.0
CMS1_k127_3680374_0 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001715 597.0
CMS1_k127_3680374_1 PFAM peptidase K08303 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006749 487.0
CMS1_k127_3680374_2 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 GO:0006139,GO:0006401,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0016070,GO:0016072,GO:0016075,GO:0019439,GO:0034641,GO:0034655,GO:0034660,GO:0034661,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:1901360,GO:1901361,GO:1901575 2.7.7.56 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000104 315.0
CMS1_k127_3680374_3 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.00000000000000000000000000000000000000000000000000000000813 203.0
CMS1_k127_3680374_4 TIGRFAM preprotein translocase, YajC subunit K03210 - - 0.0000000000000000000000000000000001971 135.0
CMS1_k127_3722764_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.0 1077.0
CMS1_k127_3722764_1 PFAM PpiC-type peptidyl-prolyl cis-trans isomerase K03770 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002287 370.0
CMS1_k127_3722764_2 Belongs to the SfsA family K06206 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003315 261.0
CMS1_k127_3722764_3 Tetratricopeptide TPR_2 repeat protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000008751 250.0
CMS1_k127_3722764_4 DnaJ molecular chaperone homology domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000254 241.0
CMS1_k127_3722764_5 - - - - 0.0000000000000000000000000000000007045 135.0
CMS1_k127_3722764_6 - - - - 0.00000000000000000000007405 99.0
CMS1_k127_3754583_0 TIGRFAM ATP-dependent helicase HrpA K03578,K03579 - 3.6.4.13 1.212e-253 800.0
CMS1_k127_3754583_1 Alpha/beta hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000282 358.0
CMS1_k127_3754583_2 Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S- adenosylmethionine. Has broad substrate specificity with 6- aminopurine nucleosides as preferred substrates K00772 - 2.4.2.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000123 301.0
CMS1_k127_3754583_3 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis K00759 - 2.4.2.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006203 292.0
CMS1_k127_3754583_4 HupE / UreJ protein K03192 - - 0.00000000000000000000000000000000000000000000000000000007061 201.0
CMS1_k127_3754583_5 PFAM Cold-shock protein, DNA-binding K03704 - - 0.00000000000000000000000000003367 119.0
CMS1_k127_3754583_6 regulation of ryanodine-sensitive calcium-release channel activity - - - 0.00000000000000000000000000165 117.0
CMS1_k127_3754583_7 - - - - 0.00000000000000000000001471 108.0
CMS1_k127_3754583_9 MORN repeat-containing protein K19755 - - 0.000000000008716 68.0
CMS1_k127_376559_0 general secretion pathway protein G K02456 - - 0.0000000000000000000000000000000000000000000000000000000000004819 216.0
CMS1_k127_376559_1 involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins K02461 - - 0.00000000000000000000000000000000000000000000000000000000362 214.0
CMS1_k127_376559_2 Type II secretion system (T2SS), protein K K02460 - - 0.0000000000000000000000000000000000000000000000000001837 197.0
CMS1_k127_376559_3 Type II secretion system (T2SS), protein J - - - 0.000000000000000000000000000000000002046 145.0
CMS1_k127_376559_4 General secretion pathway protein F K02455 - - 0.00000000000000000000000000000006063 127.0
CMS1_k127_376559_5 PFAM Glycoside hydrolase 15-related - - - 0.0000000000000000000000008919 104.0
CMS1_k127_376559_6 general secretion pathway protein K02246,K02456,K02457,K02458 - - 0.0000000000000000000003163 100.0
CMS1_k127_376559_7 Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins K02462 - - 0.0000000000000006341 83.0
CMS1_k127_376559_9 Type II transport protein GspH K02457 - - 0.0001966 51.0
CMS1_k127_3776156_0 Sulfate permease family K01673,K03321 - 4.2.1.1 1.538e-195 625.0
CMS1_k127_3776156_1 Predicted permease K07089 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000439 508.0
CMS1_k127_3776156_2 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001039 334.0
CMS1_k127_3776156_3 Uncharacterised protein family (UPF0014) K02069 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006251 271.0
CMS1_k127_3776156_4 Thioredoxin domain - - - 0.0000000000000000000000000000000000000000000000000000005314 197.0
CMS1_k127_3776156_5 Belongs to the short-chain dehydrogenases reductases (SDR) family K07124 - - 0.00000000000000000000000000000000000000000000000004713 184.0
CMS1_k127_3776156_6 Uncharacterised protein family UPF0066 - - - 0.00000000000000000000000000000000000000000002016 166.0
CMS1_k127_3776156_7 regulatory protein, arsR K03892 - - 0.000000000000000000000000000000001069 134.0
CMS1_k127_3776156_8 - - - - 0.0000000000000005618 82.0
CMS1_k127_3776156_9 Citrate transporter - - - 0.00000000000000138 76.0
CMS1_k127_3777108_0 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004882 318.0
CMS1_k127_3777108_1 One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome K02926 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001412 291.0
CMS1_k127_3777108_2 Involved in the binding of tRNA to the ribosomes K02946 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000006821 187.0
CMS1_k127_3777108_3 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.0000000000000000000000000000000001747 132.0
CMS1_k127_3777108_4 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 - - 0.00000000000000000000003762 102.0
CMS1_k127_3805583_0 Sh3 type 3 domain protein K01361 - 3.4.21.96 0.00000000000000000000000000000000000002069 152.0
CMS1_k127_3805583_1 YMGG-like Gly-zipper - - - 0.000000000000000000000000000005557 126.0
CMS1_k127_3805583_2 Protein of unknown function (DUF1059) - - - 0.00000000000000008817 84.0
CMS1_k127_3805583_3 Protein of unknown function (DUF4079) - - - 0.00000006968 57.0
CMS1_k127_3836644_0 Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily K03615 - - 2.624e-206 651.0
CMS1_k127_3836644_1 Part of a membrane complex involved in electron transport K03614 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009274 486.0
CMS1_k127_3836644_2 TIGRFAM electron transport complex, RnfABCDGE type, B subunit K03616 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001294 471.0
CMS1_k127_3836644_3 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004594 421.0
CMS1_k127_3836644_4 Part of a membrane complex involved in electron transport K03617 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001128 389.0
CMS1_k127_3836644_5 Rnf-Nqr subunit, membrane protein K03613 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000657 329.0
CMS1_k127_3836644_6 FMN_bind K03612 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003922 302.0
CMS1_k127_3837390_0 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 1.017e-206 649.0
CMS1_k127_3837390_1 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006352 442.0
CMS1_k127_3837390_10 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000000000000000000001227 179.0
CMS1_k127_3837390_11 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000000000000000002075 172.0
CMS1_k127_3837390_12 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015935,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042274,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.00000000000000000000000000000000000000000000009609 168.0
CMS1_k127_3837390_13 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0008097,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.0000000000000000000000000000000000000000002087 162.0
CMS1_k127_3837390_14 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0043021,GO:0043022,GO:0044424,GO:0044444,GO:0044464,GO:0044877 - 0.0000000000000000000000000000000000000006609 148.0
CMS1_k127_3837390_15 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit K02895 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000001247 149.0
CMS1_k127_3837390_16 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000005777 118.0
CMS1_k127_3837390_17 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000001351 112.0
CMS1_k127_3837390_18 Belongs to the universal ribosomal protein uL29 family K02904 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000005877 80.0
CMS1_k127_3837390_19 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) K02907 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000006538 79.0
CMS1_k127_3837390_2 TIGRFAM methionine aminopeptidase, type I K01265 - 3.4.11.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002398 361.0
CMS1_k127_3837390_3 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 GO:0002181,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001299 354.0
CMS1_k127_3837390_4 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009945 309.0
CMS1_k127_3837390_5 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000003362 252.0
CMS1_k127_3837390_6 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000007796 237.0
CMS1_k127_3837390_7 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000001899 214.0
CMS1_k127_3837390_8 Binds to the 23S rRNA K02876 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000153 209.0
CMS1_k127_3837390_9 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0097159,GO:1901363,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000001655 205.0
CMS1_k127_3852725_0 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001798 516.0
CMS1_k127_3852725_1 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000493 514.0
CMS1_k127_3852725_2 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000267 345.0
CMS1_k127_3852725_3 Cytochrome c assembly protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006722 329.0
CMS1_k127_3852725_4 TIGRFAM siroheme synthase K02304 - 1.3.1.76,4.99.1.4 0.00000000000000000000000000000000000000000000000000000000000000003958 229.0
CMS1_k127_3852725_5 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.0000000000000000000000000003812 115.0
CMS1_k127_3852725_6 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.000000000000000000000000002218 115.0
CMS1_k127_3852725_7 PFAM single-stranded nucleic acid binding R3H K06346 - - 0.0000000000000000000001336 106.0
CMS1_k127_3852725_8 Belongs to the bacterial ribosomal protein bL34 family K02914 - - 0.000000000000009309 74.0
CMS1_k127_3852725_9 Fic/DOC family - - - 0.0000000000003093 75.0
CMS1_k127_387648_0 Belongs to the DegT DnrJ EryC1 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003552 500.0
CMS1_k127_387648_1 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001434 413.0
CMS1_k127_387648_2 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000294 319.0
CMS1_k127_387648_3 TIGRFAM FemAB-related protein, PEP-CTERM system-associated - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000297 306.0
CMS1_k127_387648_4 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase K03606 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000007167 270.0
CMS1_k127_387648_5 Hexapeptide repeat of succinyl-transferase - - - 0.00000000000000000000000000000000000000000000000000000000000006884 216.0
CMS1_k127_387648_6 SMART AAA ATPase K02450 - - 0.00000000000000000000000000000000000000000002209 173.0
CMS1_k127_387648_7 protein tyrosine kinase activity - - - 0.000000000000000000000000000000000003941 147.0
CMS1_k127_3882493_0 SMART Elongator protein 3 MiaB NifB - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003379 536.0
CMS1_k127_3882493_1 methionine sulfoxide reductase K07305,K12267 - 1.8.4.11,1.8.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002589 482.0
CMS1_k127_3882493_2 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003781 312.0
CMS1_k127_3882493_3 ABC transporter K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002049 269.0
CMS1_k127_3882493_4 ABC transporter, phosphonate, periplasmic substrate-binding protein - - - 0.000000000000000000000000000000000000000000392 160.0
CMS1_k127_3882493_5 Phosphopantetheine attachment site K02078 - - 0.000000000000000002679 87.0
CMS1_k127_3890601_0 Belongs to the peptidase S16 family K01338,K04076,K04770 - 3.4.21.53 4.328e-257 808.0
CMS1_k127_3890601_1 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000000000005336 109.0
CMS1_k127_3936427_0 PFAM ABC transporter related K06020 - 3.6.3.25 2.463e-239 744.0
CMS1_k127_3936427_1 4Fe-4S binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004101 363.0
CMS1_k127_3946996_0 PFAM Glycosyl transferase, group 1 K08256 - 2.4.1.345 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000451 468.0
CMS1_k127_3946996_1 PFAM Glycoside hydrolase 15-related - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005122 386.0
CMS1_k127_3946996_2 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.000000000000000000000000003666 114.0
CMS1_k127_4024692_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.0 1204.0
CMS1_k127_4024692_1 Oligopeptidase F K08602 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005066 569.0
CMS1_k127_4024692_10 Serine aminopeptidase, S33 K06889 - - 0.00000000000000000000000000000000000000000000000000000000000000000001015 243.0
CMS1_k127_4024692_11 Doubled CXXCH motif (Paired_CXXCH_1) - - - 0.00000000000000000000000000000000000000000000001392 187.0
CMS1_k127_4024692_12 PFAM Uncharacterised protein family (UPF0153) - - - 0.000000000000000000000000000000000001145 147.0
CMS1_k127_4024692_2 Sigma-54 interaction domain K07714 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007386 511.0
CMS1_k127_4024692_3 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07305,K12267 - 1.8.4.11,1.8.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000193 477.0
CMS1_k127_4024692_4 Probable molybdopterin binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003761 473.0
CMS1_k127_4024692_5 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001754 349.0
CMS1_k127_4024692_6 FmdE, Molybdenum formylmethanofuran dehydrogenase operon K11261 - 1.2.7.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008352 322.0
CMS1_k127_4024692_7 Phospholipase A1 K01058 - 3.1.1.32,3.1.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002102 294.0
CMS1_k127_4024692_8 Belongs to the TtcA family K14058 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005302 265.0
CMS1_k127_4024692_9 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002548 262.0
CMS1_k127_4026889_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002509 521.0
CMS1_k127_4026889_1 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.00000000000000000000002785 100.0
CMS1_k127_4026889_2 Belongs to the N-Me-Phe pilin family K02650,K02655 - - 0.000001654 57.0
CMS1_k127_4026889_3 - - - - 0.00002314 47.0
CMS1_k127_407882_0 Pyruvate flavodoxin ferredoxin oxidoreductase domain protein K00174 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001449 584.0
CMS1_k127_407882_1 Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate K11779,K11784,K18285 - 1.21.98.1,2.5.1.120,2.5.1.77 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002618 572.0
CMS1_k127_407882_10 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007578 298.0
CMS1_k127_407882_11 Belongs to the bacterial glucokinase family K00845 - 2.7.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003634 302.0
CMS1_k127_407882_12 Glucose / Sorbosone dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002703 291.0
CMS1_k127_407882_13 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 - 2.5.1.129 0.000000000000000000000000000000000000000000000000000000000000000000001026 240.0
CMS1_k127_407882_14 PFAM Cytochrome C biogenesis protein transmembrane region K06196 - - 0.0000000000000000000000000000000000000000000000000000000000000000003168 239.0
CMS1_k127_407882_15 Zn-dependent hydrolases of the beta-lactamase fold - - - 0.00000000000000000000000000000000000000000000000000000002432 209.0
CMS1_k127_407882_16 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000007591 186.0
CMS1_k127_407882_17 6-O-methylguanine DNA methyltransferase, DNA binding domain K00567 - 2.1.1.63 0.000000000000000000000000000000000000000000000004551 180.0
CMS1_k127_407882_18 Transcriptional regulator, TetR family - - - 0.0000000000000000000000000000000000000000000008395 173.0
CMS1_k127_407882_19 Mu-like prophage protein Gp16 - - - 0.0000000000000000000000000000000000000000005369 161.0
CMS1_k127_407882_2 Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2) K11784 - 1.21.98.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002195 529.0
CMS1_k127_407882_20 PFAM Thioredoxin K03671 - - 0.0000000000000000000000000103 114.0
CMS1_k127_407882_21 PFAM Pyruvate flavodoxin ferredoxin oxidoreductase K00174 - 1.2.7.11,1.2.7.3 0.0000000000000000000003889 99.0
CMS1_k127_407882_22 Response regulator, receiver - - - 0.000000000000000002415 86.0
CMS1_k127_407882_23 Protein of unknown function (DUF1566) - - - 0.00000000000000005296 87.0
CMS1_k127_407882_24 Domain of unknown function (DUF5122) beta-propeller - - - 0.000000003287 64.0
CMS1_k127_407882_3 oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor K00175 - 1.2.7.11,1.2.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009566 415.0
CMS1_k127_407882_4 4-hydroxybenzoate polyprenyltransferase K03179 - 2.5.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008111 399.0
CMS1_k127_407882_5 Amidohydrolase family K20810 - 3.5.4.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003939 349.0
CMS1_k127_407882_6 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) K03183 - 2.1.1.163,2.1.1.201 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005081 337.0
CMS1_k127_407882_7 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002587 321.0
CMS1_k127_407882_9 Catalyzes the dehydration of chorismate into 3- (1- carboxyvinyl)oxy benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11782 - 4.2.1.151 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005308 310.0
CMS1_k127_4134544_0 Conserved carboxylase domain K01958 - 6.4.1.1 0.0 1027.0
CMS1_k127_4134544_1 PFAM Carbamoyl-phosphate synthase L chain K01959,K01961 - 6.3.4.14,6.4.1.1,6.4.1.2 1.595e-249 776.0
CMS1_k127_4134544_2 E1-E2 ATPase K17686 - 3.6.3.54 5.533e-220 692.0
CMS1_k127_4134544_3 Viral (Superfamily 1) RNA helicase K03581 - 3.1.11.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004033 467.0
CMS1_k127_4134544_4 metal-dependent phosphohydrolase HD region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000009175 258.0
CMS1_k127_4134544_5 Roadblock/LC7 domain - - - 0.000000000000000000000000000000353 129.0
CMS1_k127_4134544_6 Ras family K06883 - - 0.000000000000000001406 85.0
CMS1_k127_4134544_7 E1-E2 ATPase K01533,K17686 - 3.6.3.4,3.6.3.54 0.0000000005453 64.0
CMS1_k127_4194139_0 PFAM sodium neurotransmitter symporter K03308 - - 1.767e-235 738.0
CMS1_k127_4194139_1 alginic acid biosynthetic process - - - 1.602e-234 755.0
CMS1_k127_4194139_11 OmpA family - - - 0.000000000000000000000001742 117.0
CMS1_k127_4194139_13 CGGC - - - 0.000000000004151 68.0
CMS1_k127_4194139_15 RDD family - - - 0.00001471 57.0
CMS1_k127_4194139_2 PFAM SPFH domain Band 7 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001262 546.0
CMS1_k127_4194139_3 AsmA-like C-terminal region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001493 488.0
CMS1_k127_4194139_4 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 GO:0003674,GO:0005488,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008289,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0019637,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.4.1.182 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002533 394.0
CMS1_k127_4194139_5 PFAM oxidoreductase domain protein K09949 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002458 387.0
CMS1_k127_4194139_6 Psort location Cytoplasmic, score - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001229 324.0
CMS1_k127_4194139_7 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K07032 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001207 244.0
CMS1_k127_4194139_9 COG1335 Amidases related to nicotinamidase - - - 0.00000000000000000000000000000002316 136.0
CMS1_k127_4205138_0 Elongation factor SelB winged helix K03833 - - 1.599e-233 734.0
CMS1_k127_4205138_1 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008948 424.0
CMS1_k127_4205138_2 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000236 295.0
CMS1_k127_4205138_3 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004435 293.0
CMS1_k127_4205138_4 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family K13283 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006516 278.0
CMS1_k127_4205138_5 Peptidyl-prolyl cis-trans - - - 0.00000000000000000000000000000000000000000000000000000000000007763 220.0
CMS1_k127_4205138_6 AMMECR1 K06990 - - 0.000000000000000000000000000000000000000000000000000001616 197.0
CMS1_k127_4205138_7 the current gene model (or a revised gene model) may contain one or more premature stops and or frameshifts - - - 0.00000000000000000000000000000000000000000000000000001428 191.0
CMS1_k127_4215263_0 Belongs to the SIS family. GutQ KpsF subfamily K06041 - 5.3.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003559 449.0
CMS1_k127_4215263_1 Methylene-tetrahydrofolate reductase C terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001919 391.0
CMS1_k127_4215263_2 Participates in initiation and elongation during chromosome replication K02314,K02316,K17680 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004901 355.0
CMS1_k127_4215263_3 4Fe-4S dicluster domain K03390 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001164 307.0
CMS1_k127_4215263_4 PFAM methyl-viologen-reducing hydrogenase delta subunit - - - 0.000000000000000000000000000000000000000000000000000000000565 205.0
CMS1_k127_4215263_5 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 0.00000000000000000000000000000000000000000000000000006023 188.0
CMS1_k127_4215263_6 Tetratricopeptide repeat - - - 0.0000000003979 73.0
CMS1_k127_4238385_0 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 2.877e-227 712.0
CMS1_k127_4238385_1 Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria K18672 - 2.7.7.85 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005714 327.0
CMS1_k127_4238385_2 PFAM ribosomal RNA methyltransferase RrmJ FtsJ K06442 - 2.1.1.226,2.1.1.227 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004107 308.0
CMS1_k127_4238385_3 YbbR-like protein - - - 0.0000000000000000000000000000000000000000000000000003346 198.0
CMS1_k127_424146_0 ATP-dependent helicase HrpB K03579 - 3.6.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007732 474.0
CMS1_k127_424146_1 TM2 domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003898 238.0
CMS1_k127_424146_2 PFAM ABC transporter related - - - 0.0000000000000000000000000000000000000000000000000000000000000000001906 233.0
CMS1_k127_424146_3 Methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000001377 219.0
CMS1_k127_424146_4 protein conserved in bacteria (DUF2179) - - - 0.00000000000000000000000000000000000000000000000000000000004768 210.0
CMS1_k127_424146_5 RNA recognition motif - - - 0.000000000000000001956 87.0
CMS1_k127_4258231_0 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP K02837 GO:0003674,GO:0003676,GO:0003723,GO:0003747,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0016150,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 6.915e-280 866.0
CMS1_k127_4258231_1 FtsX-like permease family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001423 453.0
CMS1_k127_4258231_10 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.0000000000000000000000000000000000000004241 154.0
CMS1_k127_4258231_11 - - - - 0.0000000000000000000000000614 109.0
CMS1_k127_4258231_2 Prokaryotic cytochrome b561 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005926 353.0
CMS1_k127_4258231_3 PFAM ABC transporter related K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001658 319.0
CMS1_k127_4258231_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001338 309.0
CMS1_k127_4258231_5 Prokaryotic cytochrome b561 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001264 303.0
CMS1_k127_4258231_6 Acts as a magnesium transporter K06213 - - 0.0000000000000000000000000000000000000000000000000000000000000007264 223.0
CMS1_k127_4258231_7 Part of the ABC transporter complex LolCDE involved in the translocation of K09810 - - 0.0000000000000000000000000000000000000000000000000000002523 201.0
CMS1_k127_4258231_8 Putative zinc- or iron-chelating domain - - - 0.00000000000000000000000000000000000000000000000001666 187.0
CMS1_k127_4258231_9 PFAM NosL family protein - - - 0.00000000000000000000000000000000000000000000002524 177.0
CMS1_k127_4279661_0 Predicted permease K07089 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003587 346.0
CMS1_k127_4279661_1 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001996 305.0
CMS1_k127_4279661_2 Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit K02427 - 2.1.1.166 0.00000000000000000000000000000000000000000000000000007587 190.0
CMS1_k127_4279661_3 Predicted membrane protein (DUF2318) - - - 0.0000000000000000000000000000000000000000000000001122 181.0
CMS1_k127_4279661_4 PFAM ATP-binding region, ATPase domain protein - - - 0.00000000000000000000000000000000000000007938 161.0
CMS1_k127_4279661_5 helix_turn_helix, Arsenical Resistance Operon Repressor K21903 - - 0.0000000000000000000000000000000000002706 143.0
CMS1_k127_4314011_0 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 1.083e-232 725.0
CMS1_k127_4314011_1 Methylene-tetrahydrofolate reductase C terminal K00297 - 1.5.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001573 587.0
CMS1_k127_4314011_2 curli production assembly transport component CsgG - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000618 449.0
CMS1_k127_4314011_3 helix_turn_helix, cAMP Regulatory protein K10914 - - 0.00000000000000000000000000000000000000000000000000000000000000001781 230.0
CMS1_k127_4415201_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 GO:0003674,GO:0003824,GO:0004812,GO:0004823,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006429,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.4 0.0 1108.0
CMS1_k127_4415201_1 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 0.0 1073.0
CMS1_k127_4415201_2 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05540 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001638 335.0
CMS1_k127_4415201_3 Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane K03643 GO:0001530,GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0006810,GO:0006869,GO:0008150,GO:0008289,GO:0009279,GO:0009987,GO:0010876,GO:0015920,GO:0016020,GO:0016043,GO:0019867,GO:0022607,GO:0030312,GO:0030313,GO:0031975,GO:0033036,GO:0043163,GO:0043165,GO:0044085,GO:0044091,GO:0044462,GO:0044464,GO:0045229,GO:0051179,GO:0051234,GO:0061024,GO:0071702,GO:0071709,GO:0071840,GO:0071944,GO:0097367,GO:1901264 - 0.000000000000000000007134 99.0
CMS1_k127_4428688_0 TIGRFAM glutaminyl-tRNA synthetase K01886 - 6.1.1.18 9.924e-282 878.0
CMS1_k127_4428688_1 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 1.835e-237 743.0
CMS1_k127_4428688_11 Isoprenylcysteine carboxyl methyltransferase (ICMT) family - - - 0.000000001255 63.0
CMS1_k127_4428688_12 Protein of unknown function (DUF721) - - - 0.0000001142 59.0
CMS1_k127_4428688_13 PFAM TPR repeat Tetratricopeptide TPR_2 - - - 0.0000007405 59.0
CMS1_k127_4428688_14 Di-haem oxidoreductase, putative peroxidase - - - 0.000006199 58.0
CMS1_k127_4428688_2 PFAM ribonuclease II K01147,K12573 - 3.1.13.1 1.306e-205 660.0
CMS1_k127_4428688_3 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002813 538.0
CMS1_k127_4428688_4 Domain of unknown function (DUF4438) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002886 432.0
CMS1_k127_4428688_5 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009183 313.0
CMS1_k127_4428688_6 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003896 279.0
CMS1_k127_4428688_7 Efflux ABC transporter, permease protein K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000001504 242.0
CMS1_k127_4428688_8 Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides K02003 - - 0.000000000000000000000000000000000000000000000000000008292 197.0
CMS1_k127_4428688_9 Cyclic nucleotide-monophosphate binding domain K21563 - - 0.00000000000000000000000000000003014 134.0
CMS1_k127_443014_0 TIGRFAM ribonuclease, Rne Rng family K08300,K08301 - 3.1.26.12 2.925e-218 690.0
CMS1_k127_443014_1 Histidine kinase - - - 0.00000000000000000000000000000000218 149.0
CMS1_k127_443014_2 PFAM Metal-dependent phosphohydrolase, HD - - - 0.000000000000000000000000000000009024 147.0
CMS1_k127_443014_3 metal-dependent phosphohydrolase HD region K07814 - - 0.00000000000000000000009633 114.0
CMS1_k127_4435774_0 PFAM S-adenosylmethionine synthetase (MAT) K00789 - 2.5.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001336 478.0
CMS1_k127_4435774_1 Belongs to the deoxyhypusine synthase family K00809 - 2.5.1.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003725 461.0
CMS1_k127_4435774_2 Pyruvoyl-dependent arginine decarboxylase (PvlArgDC) K02626 - 4.1.1.19 0.000000000000000000000000000000000000000000000000000000000000001864 222.0
CMS1_k127_4435774_3 Protein of unknown function (DUF1003) - - - 0.000000000000000000000000000000000000004796 147.0
CMS1_k127_4435774_4 PFAM GCN5-related N-acetyltransferase - - - 0.000000000000000000000000000000004241 131.0
CMS1_k127_4435774_5 - - - - 0.0000000000000000000001795 102.0
CMS1_k127_4437462_0 Phosphoenolpyruvate carboxykinase N-terminal domain K01596 - 4.1.1.32 4.443e-301 937.0
CMS1_k127_4437462_1 - - - - 0.0002445 46.0
CMS1_k127_445250_0 Sterol-sensing domain of SREBP cleavage-activation K07003 - - 1.329e-246 785.0
CMS1_k127_445250_1 Protein kinase, ABC1 domain-containing - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001026 499.0
CMS1_k127_445250_2 Protein of unknown function (DUF1329) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002022 347.0
CMS1_k127_445250_3 Bacterial regulatory proteins, tetR family K16137 - - 0.00000000000000000000000000000000000000000000000000000000000000004329 228.0
CMS1_k127_445250_4 Sh3 type 3 domain protein - - - 0.0000000000000000000000000000000000000000000000000000002689 201.0
CMS1_k127_445250_5 Cbs domain - - - 0.00008395 53.0
CMS1_k127_4457002_0 PFAM ABC transporter related - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002686 596.0
CMS1_k127_4457002_1 PhnA Zinc-Ribbon K06193 - - 0.000000000000000000000000000000000000000000000000000001372 194.0
CMS1_k127_4457002_2 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.0000000000000000000000000000000000008071 140.0
CMS1_k127_4457002_3 PFAM Cold-shock protein, DNA-binding K03704 - - 0.0000000000000000000000000000002089 123.0
CMS1_k127_4457002_4 DNA-binding transcription factor activity - - - 0.0000000000000000000000000000006944 124.0
CMS1_k127_4457002_5 Zinc-ribbon containing domain - - - 0.000000000002032 75.0
CMS1_k127_447287_0 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 1.481e-277 875.0
CMS1_k127_447287_1 Nucleotidyl transferase K00963 - 2.7.7.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000937 434.0
CMS1_k127_447287_10 Nucleotidyltransferase domain - - - 0.000000000000000000000000008232 111.0
CMS1_k127_447287_11 Leucine Rich Repeat - - - 0.00000001264 68.0
CMS1_k127_447287_12 general secretion pathway protein - - - 0.00001271 48.0
CMS1_k127_447287_2 Belongs to the LarC family K09121 - 4.99.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004957 389.0
CMS1_k127_447287_3 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 - 2.1.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005721 372.0
CMS1_k127_447287_4 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001436 346.0
CMS1_k127_447287_5 Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG) K01095 - 3.1.3.27 0.00000000000000000000000000000000000000000000000000000000663 203.0
CMS1_k127_447287_6 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.00000000000000000000000000000000000000000000000004518 184.0
CMS1_k127_447287_7 Nucleotidyltransferase substrate binding protein like - - - 0.000000000000000000000000000000000000000000000003315 176.0
CMS1_k127_447287_8 PFAM SNARE associated Golgi protein - - - 0.0000000000000000000000000000000000000000001531 168.0
CMS1_k127_447287_9 Alpha-tubulin suppressor and related RCC1 domain-containing proteins - - - 0.000000000000000000000000000000000000000001898 177.0
CMS1_k127_4477051_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.0 2099.0
CMS1_k127_4477051_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 - 2.7.7.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003087 394.0
CMS1_k127_4477051_2 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 GO:0000470,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022625,GO:0022626,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004417 371.0
CMS1_k127_4477051_3 Participates in transcription elongation, termination and antitermination K02601 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007005 310.0
CMS1_k127_4477051_4 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000001716 237.0
CMS1_k127_4477051_5 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.0000000000000000000000000000000000000000000000000000000003673 204.0
CMS1_k127_4477051_6 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000007177 191.0
CMS1_k127_4477051_7 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.0000000000000000000000000000000001747 132.0
CMS1_k127_4477051_8 Belongs to the bacterial ribosomal protein bL33 family K02913 - - 0.0000000000000000000001471 97.0
CMS1_k127_4477051_9 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation K03073 - - 0.000000000007981 68.0
CMS1_k127_4485787_0 Butirosin biosynthesis protein H, N-terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002994 351.0
CMS1_k127_4485787_1 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K01802,K03767,K03768 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000001414 266.0
CMS1_k127_4485787_2 - - - - 0.0000000000000000000000000000000000007801 144.0
CMS1_k127_4485787_3 PFAM Radical SAM - - - 0.000000000000000000000000000000000004735 141.0
CMS1_k127_4504536_0 pfam abc1 K03688 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001244 516.0
CMS1_k127_4504536_1 protein conserved in bacteria K09764 - - 0.0000000000002929 73.0
CMS1_k127_4504536_2 granule-associated protein - - - 0.00000000002227 70.0
CMS1_k127_4504536_3 metal-binding protein - - - 0.0000002285 57.0
CMS1_k127_4529491_0 Ribosomal protein S1-like RNA-binding domain K02945 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001166 416.0
CMS1_k127_4529491_1 Bifunctional protein K03272 GO:0000271,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0006629,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0008713,GO:0008920,GO:0009058,GO:0009059,GO:0009103,GO:0009244,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016301,GO:0016310,GO:0016740,GO:0016757,GO:0016772,GO:0019200,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0046401,GO:0046835,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 2.7.1.167,2.7.7.70 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005084 353.0
CMS1_k127_4529491_10 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) K03634 - - 0.00000000000000000000000000000000000000000183 163.0
CMS1_k127_4529491_11 4Fe-4S binding domain - - - 0.000000000000000000000000000000005425 129.0
CMS1_k127_4529491_12 Belongs to the UPF0296 family K09777 - - 0.0000000000000000000000000000002202 124.0
CMS1_k127_4529491_13 Putative auto-transporter adhesin, head GIN domain - - - 0.000000000000001572 85.0
CMS1_k127_4529491_2 CO dehydrogenase/acetyl-CoA synthase delta subunit K00197 - 2.1.1.245 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001076 349.0
CMS1_k127_4529491_3 Provides the (R)-glutamate required for cell wall biosynthesis K01776 - 5.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001139 340.0
CMS1_k127_4529491_4 PFAM Glycoside hydrolase 15-related - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002034 299.0
CMS1_k127_4529491_5 Domain of unknown function (DUF1732) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003729 286.0
CMS1_k127_4529491_6 TIGRFAM phosphodiesterase, MJ0936 family K07095 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002745 260.0
CMS1_k127_4529491_7 Essential for recycling GMP and indirectly, cGMP K00942 - 2.7.4.8 0.00000000000000000000000000000000000000000000000000000000000006399 224.0
CMS1_k127_4529491_8 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03218 - 2.1.1.185 0.00000000000000000000000000000000000000000000000000000000000008242 222.0
CMS1_k127_4529491_9 ROS/MUCR transcriptional regulator protein - - - 0.000000000000000000000000000000000000000000000003934 177.0
CMS1_k127_4556348_0 Aminotransferase class I and II K00814 - 2.6.1.2 8.104e-236 734.0
CMS1_k127_4556348_1 Belongs to the citrate synthase family K01647 - 2.3.3.1 4.521e-207 651.0
CMS1_k127_4556348_2 Belongs to the ompA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002617 344.0
CMS1_k127_4556348_3 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 - 2.5.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000002047 244.0
CMS1_k127_4590946_0 AcrB/AcrD/AcrF family K07787 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001089 474.0
CMS1_k127_4590946_1 - - - - 0.00000000000000000000000000000000005736 139.0
CMS1_k127_4590946_2 ATP synthase K02115 - - 0.00000000000000000001912 93.0
CMS1_k127_4650921_0 - - - - 4.735e-235 746.0
CMS1_k127_4650921_1 - - - - 0.0000000000000000000000000000000000001719 143.0
CMS1_k127_4650921_2 - - - - 0.000000000000000000000000000000001655 130.0
CMS1_k127_4650921_3 - - - - 0.00000000000000000000000005608 110.0
CMS1_k127_4652897_0 4Fe-4S dicluster domain - - - 0.0 1005.0
CMS1_k127_4652897_1 cysteinyl-tRNA synthetase K01738,K01883,K12339 - 2.5.1.47,6.1.1.16 1.948e-274 855.0
CMS1_k127_4652897_2 DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity K03581 - 3.1.11.5 3.131e-211 679.0
CMS1_k127_4652897_3 PFAM Polysulphide reductase, NrfD K00185 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001374 557.0
CMS1_k127_4652897_4 PFAM Nitrate reductase gamma subunit K00374 - 1.7.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001858 477.0
CMS1_k127_4652897_5 PFAM 4Fe-4S ferredoxin iron-sulfur binding domain protein K00184 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001068 398.0
CMS1_k127_4652897_6 Belongs to the HisA HisF family K01814 - 5.3.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001387 376.0
CMS1_k127_4652897_7 Core component of the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. Binds to DNA. The KaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001574 263.0
CMS1_k127_4652897_8 - - - - 0.0000000000000000000000000000000000000000000002515 170.0
CMS1_k127_4652897_9 RsbT co-antagonist protein rsbRD N-terminal domain - - - 0.0000000000000000000000002071 113.0
CMS1_k127_4693000_0 Belongs to the NifD NifK NifE NifN family K02587 - - 1.723e-234 733.0
CMS1_k127_4693000_1 aldolase class-II K01624 - 4.1.2.13 2.486e-215 675.0
CMS1_k127_4693000_10 PFAM binding-protein-dependent transport systems inner membrane component K02018 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001568 262.0
CMS1_k127_4693000_11 pfam abc K02017 - 3.6.3.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000002119 263.0
CMS1_k127_4693000_12 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000001311 238.0
CMS1_k127_4693000_13 Bacterial extracellular solute-binding protein K02020 - - 0.0000000000000000000000000000000000000000000000000000000001722 212.0
CMS1_k127_4693000_14 Belongs to the P(II) protein family K04751 - - 0.000000000000000000000000000000000000000000000003294 175.0
CMS1_k127_4693000_15 Bacterial regulatory helix-turn-helix protein, lysR family K02019 - - 0.00000000000000000000000000000000009536 136.0
CMS1_k127_4693000_16 Dinitrogenase iron-molybdenum cofactor - - - 0.0000000000000000000000006451 109.0
CMS1_k127_4693000_2 Ammonium Transporter K03320 - - 4.897e-215 677.0
CMS1_k127_4693000_3 cofactor biosynthesis protein NifB K02585 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000174 608.0
CMS1_k127_4693000_4 Belongs to the NifD NifK NifE NifN family K02592 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008101 589.0
CMS1_k127_4693000_5 PFAM amidohydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003246 438.0
CMS1_k127_4693000_6 SMART metal-dependent phosphohydrolase HD region K01129 - 3.1.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002371 422.0
CMS1_k127_4693000_7 Uncharacterised 5xTM membrane BCR, YitT family COG1284 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005742 339.0
CMS1_k127_4693000_8 Belongs to the alpha-IPM synthase homocitrate synthase family K01649,K02594 - 2.3.3.13,2.3.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004209 327.0
CMS1_k127_4693000_9 PFAM Glutamine amidotransferase class-I K01951 - 6.3.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001085 275.0
CMS1_k127_4694096_0 TIGRFAM acetolactate synthase, large subunit, biosynthetic type K01652 - 2.2.1.6 2.185e-319 983.0
CMS1_k127_4694096_1 Homocysteine biosynthesis enzyme, sulfur-incorporation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004352 579.0
CMS1_k127_4694096_10 TIGRFAM acetolactate synthase, small subunit K01653 - 2.2.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000005506 254.0
CMS1_k127_4694096_11 PFAM CBS domain containing protein K04767 - - 0.0000000000000000000000000000000000000000000000000000000000000000002592 234.0
CMS1_k127_4694096_12 Catalyzes the hydrolysis of futalosine (FL) to dehypoxanthine futalosine (DHFL) and hypoxanthine, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11783 - 3.2.2.26 0.00000000000000000000000000000000000000000000001079 179.0
CMS1_k127_4694096_13 PFAM asparagine synthase K06864 - - 0.0000000000000000000000000000000000000000000009727 175.0
CMS1_k127_4694096_14 Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine K01579 - 4.1.1.11 0.00000000000000000000000000000000000000000008457 162.0
CMS1_k127_4694096_15 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.00000000000000000000000000000004973 126.0
CMS1_k127_4694096_16 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000001796 115.0
CMS1_k127_4694096_17 protein conserved in bacteria (DUF2062) K09928 - - 0.000000000000000000000001322 105.0
CMS1_k127_4694096_18 Histidine kinase-like ATPases - - - 0.0000006516 51.0
CMS1_k127_4694096_2 PFAM Prephenate dehydratase K14170 - 4.2.1.51,5.4.99.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000271 477.0
CMS1_k127_4694096_3 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007818 423.0
CMS1_k127_4694096_4 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 GO:0003674,GO:0003824,GO:0006732,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0018130,GO:0019538,GO:0019637,GO:0019720,GO:0043170,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0046483,GO:0051186,GO:0051188,GO:0051189,GO:0071704,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.99.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009831 399.0
CMS1_k127_4694096_5 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 GO:0000408,GO:0002949,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070525,GO:0071704,GO:0090304,GO:1901360 2.3.1.234 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004053 395.0
CMS1_k127_4694096_6 Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11785 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000018 337.0
CMS1_k127_4694096_7 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004344 306.0
CMS1_k127_4694096_8 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 - 6.3.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001185 304.0
CMS1_k127_4694096_9 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004376 293.0
CMS1_k127_4699101_0 PFAM aminotransferase class I and II K00812 - 2.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001237 610.0
CMS1_k127_4699101_1 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002893 488.0
CMS1_k127_4699101_2 DEAD DEAH box helicase K11927 - 3.6.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001812 486.0
CMS1_k127_4699101_3 Mycolic acid cyclopropane synthetase K00574 - 2.1.1.79 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000305 476.0
CMS1_k127_4699101_4 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009147 471.0
CMS1_k127_4699101_5 PFAM Cytochrome b5 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005154 291.0
CMS1_k127_4699101_6 PFAM Imidazoleglycerol-phosphate dehydratase K01693 GO:0000105,GO:0003674,GO:0003824,GO:0004424,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.2.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001258 275.0
CMS1_k127_4699101_7 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000002705 269.0
CMS1_k127_4699101_8 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000075 229.0
CMS1_k127_4699101_9 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.000000000000000000000000000000000000000000001462 168.0
CMS1_k127_4715021_0 Predicted membrane protein (DUF2238) K08984 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002616 301.0
CMS1_k127_4715021_1 MatE K03327 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003749 292.0
CMS1_k127_4715021_2 DNA-3-methyladenine glycosylase K01246 - 3.2.2.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000001174 263.0
CMS1_k127_4715021_3 Nickel-containing superoxide dismutase K00518 - 1.15.1.1 0.000000000000000000000000000000000000000004667 161.0
CMS1_k127_4720391_0 Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties K00688 - 2.4.1.1 3.793e-260 814.0
CMS1_k127_4720391_1 metal-dependent phosphohydrolase HD sub K00970 - 2.7.7.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000008247 265.0
CMS1_k127_4752578_0 chorismate binding enzyme K01665,K03342 - 2.6.1.85,4.1.3.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001864 550.0
CMS1_k127_4752578_1 PFAM CBS domain containing protein K04767 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002848 319.0
CMS1_k127_4752578_2 Penicillin-binding protein, 1A family K05366 - 2.4.1.129,3.4.16.4 0.0000000000000000000000000000000000001581 146.0
CMS1_k127_4764884_0 TIGRFAM lysine 2,3-aminomutase YodO family protein K01843 - 5.4.3.2 8.401e-225 703.0
CMS1_k127_4764884_1 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001507 557.0
CMS1_k127_4764884_10 protein conserved in bacteria K09781 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007788 362.0
CMS1_k127_4764884_11 HlyD family secretion protein K01993 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002211 302.0
CMS1_k127_4764884_12 Protein of unknown function (DUF3373) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003765 273.0
CMS1_k127_4764884_13 PFAM GCN5-related N-acetyltransferase K21935 - 2.3.1.264 0.0000000000000000000000000000000000000000000000000000000000000000000000000005303 265.0
CMS1_k127_4764884_15 DJ-1/PfpI family K05520 - 3.5.1.124 0.0000000000000000000000000000000000000000000000000000675 196.0
CMS1_k127_4764884_16 WD domain, G-beta repeat - - - 0.00000000000000000000000000000000000000000000000006029 201.0
CMS1_k127_4764884_17 COGs COG0790 FOG TPR repeat SEL1 subfamily - - - 0.0000000000000000000000000000008564 140.0
CMS1_k127_4764884_18 Protein of unknown function (DUF504) - - - 0.000000000000000000000002838 104.0
CMS1_k127_4764884_2 FtsX-like permease family K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001416 493.0
CMS1_k127_4764884_20 Gamma-glutamyl cyclotransferase, AIG2-like - - - 0.00000000000000000000005398 102.0
CMS1_k127_4764884_21 Iron-sulphur cluster biosynthesis K13628,K15724 - - 0.000000000000000004985 88.0
CMS1_k127_4764884_22 protein kinase activity - - - 0.00000002927 64.0
CMS1_k127_4764884_3 Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002902 490.0
CMS1_k127_4764884_4 PFAM Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003527 441.0
CMS1_k127_4764884_5 ABC transporter K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005702 440.0
CMS1_k127_4764884_6 HlyD family secretion protein K02005 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007639 433.0
CMS1_k127_4764884_7 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006039 439.0
CMS1_k127_4764884_8 ATPases associated with a variety of cellular activities K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005685 363.0
CMS1_k127_4764884_9 PFAM Nitroreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009159 364.0
CMS1_k127_4795229_0 Patatin-like phospholipase K07001 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004643 303.0
CMS1_k127_4795229_1 Surface antigen - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001669 296.0
CMS1_k127_4795229_2 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.00000000000000003451 88.0
CMS1_k127_4796532_0 AAA domain, putative AbiEii toxin, Type IV TA system K01990,K09695 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000176 336.0
CMS1_k127_4796532_1 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.000000000000000000000001728 106.0
CMS1_k127_480400_0 Belongs to the pirin family K06911 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009438 469.0
CMS1_k127_480400_1 Doubled CXXCH motif (Paired_CXXCH_1) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004002 291.0
CMS1_k127_480400_2 Tetratricopeptide repeat - - - 0.00000000000000000000000000000008196 136.0
CMS1_k127_480400_3 amine dehydrogenase activity - - - 0.0000000000000000000001586 108.0
CMS1_k127_480400_4 Tetratricopeptide repeat - - - 0.0001932 53.0
CMS1_k127_4821100_0 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 0.0 1018.0
CMS1_k127_4821100_1 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004654,GO:0005488,GO:0006139,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009892,GO:0009987,GO:0010468,GO:0010605,GO:0010629,GO:0016070,GO:0016071,GO:0016740,GO:0016772,GO:0016779,GO:0019222,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0060255,GO:0065007,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901575 2.7.7.8 2.298e-283 885.0
CMS1_k127_4821100_10 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016556,GO:0016853,GO:0016866,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1990481 5.4.99.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002091 273.0
CMS1_k127_4821100_11 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA K01520 GO:0000287,GO:0003674,GO:0003824,GO:0004170,GO:0005488,GO:0006139,GO:0006220,GO:0006221,GO:0006226,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009141,GO:0009143,GO:0009147,GO:0009149,GO:0009157,GO:0009162,GO:0009165,GO:0009166,GO:0009176,GO:0009177,GO:0009200,GO:0009204,GO:0009211,GO:0009213,GO:0009219,GO:0009221,GO:0009223,GO:0009262,GO:0009263,GO:0009264,GO:0009265,GO:0009394,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046078,GO:0046080,GO:0046081,GO:0046385,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0046872,GO:0047429,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0072529,GO:0090407,GO:1901135,GO:1901136,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 3.6.1.23 0.00000000000000000000000000000000000000000000000000005044 191.0
CMS1_k127_4821100_12 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 K00339 - 1.6.5.3 0.0000000000000000000000000000000000000000000000002355 181.0
CMS1_k127_4821100_13 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340,K05576 - 1.6.5.3 0.0000000000000000000000000000000000000001029 152.0
CMS1_k127_4821100_14 Required for maturation of 30S ribosomal subunits K09748 - - 0.0000000000000000000000000000000000005935 145.0
CMS1_k127_4821100_15 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000000001594 139.0
CMS1_k127_4821100_16 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.00000000000000000000000008977 111.0
CMS1_k127_4821100_17 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338,K05580 - 1.6.5.3 0.0000000000000000009062 86.0
CMS1_k127_4821100_18 ribosomal protein L7Ae L30e S12e Gadd45 K07742 - - 0.0000000004082 66.0
CMS1_k127_4821100_19 plastoquinone (complex I) K05568,K12137 - - 0.000000001752 59.0
CMS1_k127_4821100_2 PFAM NADH Ubiquinone plastoquinone (complex I) K05568,K12137 - - 3.458e-263 821.0
CMS1_k127_4821100_3 TIGRFAM proton-translocating NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 6.705e-245 764.0
CMS1_k127_4821100_4 PFAM NADH Ubiquinone plastoquinone (complex I) K05568 - - 1.697e-233 730.0
CMS1_k127_4821100_5 Participates in both transcription termination and antitermination K02600 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000193 592.0
CMS1_k127_4821100_6 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001387 515.0
CMS1_k127_4821100_7 PFAM phosphoesterase RecJ domain protein K06881 - 3.1.13.3,3.1.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001088 402.0
CMS1_k127_4821100_8 Insulinase (Peptidase family M16) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001119 406.0
CMS1_k127_4821100_9 Beta-lactamase superfamily domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006824 275.0
CMS1_k127_4835487_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 1.553e-230 749.0
CMS1_k127_4835487_1 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000202 554.0
CMS1_k127_4835487_10 Response regulator containing a CheY-like receiver domain and an HD-GYP domain K07814 - - 0.0000000000000000000000000000000000000000000000000000000000000001926 236.0
CMS1_k127_4835487_11 - - - - 0.0000000000000000000000000000000000000000000000001333 185.0
CMS1_k127_4835487_12 - - - - 0.000000000000000000000000000000000000000000001285 173.0
CMS1_k127_4835487_13 diguanylate cyclase - - - 0.000000000000000000000000000000000000000001409 181.0
CMS1_k127_4835487_14 Domain of unknown function (DUF1992) - - - 0.000000000000000000000000000000000009102 139.0
CMS1_k127_4835487_2 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00639 - 2.3.1.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002693 515.0
CMS1_k127_4835487_3 DeoC/LacD family aldolase K08321 - 2.3.1.245 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000078 466.0
CMS1_k127_4835487_4 Polysaccharide biosynthesis protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002183 430.0
CMS1_k127_4835487_5 Creatinase/Prolidase N-terminal domain K01262 - 3.4.11.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009071 421.0
CMS1_k127_4835487_6 Alcohol dehydrogenase GroES-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007957 405.0
CMS1_k127_4835487_7 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K01142,K10773 - 3.1.11.2,4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001809 363.0
CMS1_k127_4835487_8 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001674 371.0
CMS1_k127_4835487_9 TIGRFAM Na Ca antiporter, CaCA family K07301 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000252 266.0
CMS1_k127_4842238_0 PFAM CO dehydrogenase acetyl-CoA synthase complex beta subunit K14138 - 2.3.1.169 0.0 1310.0
CMS1_k127_4842238_1 PFAM Methylenetetrahydrofolate reductase K00297,K00547 - 1.5.1.20,2.1.1.10 0.0 1151.0
CMS1_k127_4842238_2 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00123 - 1.17.1.9 0.0 1139.0
CMS1_k127_4842238_3 TIGRFAM carbon-monoxide dehydrogenase, catalytic subunit K00198 - 1.2.7.4 0.0 1047.0
CMS1_k127_4842238_4 CO dehydrogenase acetyl-CoA synthase delta subunit K00197 - 2.1.1.245 1.232e-236 737.0
CMS1_k127_4842238_5 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001588 479.0
CMS1_k127_4842238_6 Oxygen tolerance - - - 0.0005322 49.0
CMS1_k127_4847896_0 May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate K21420 - 2.3.2.29 0.000000000000000000000000000000000000000000000000000000000000002195 225.0
CMS1_k127_4847896_1 Haem-binding uptake, Tiki superfamily, ChaN - - - 0.00000000000000000000000000000000000000000000000000000000000007524 223.0
CMS1_k127_4847896_2 response regulator, receiver K02479 - - 0.000000000000000000000000000000000000000000000000004744 188.0
CMS1_k127_4847896_3 permease K03548 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008150,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944 - 0.00000000000000000000000001207 122.0
CMS1_k127_4855924_0 synthase K00703 GO:0000271,GO:0003674,GO:0003824,GO:0004373,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0005977,GO:0005978,GO:0006073,GO:0006091,GO:0006112,GO:0008150,GO:0008152,GO:0008194,GO:0009058,GO:0009059,GO:0009250,GO:0009987,GO:0015980,GO:0016051,GO:0016740,GO:0016757,GO:0016758,GO:0033692,GO:0034637,GO:0034645,GO:0035251,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0046527,GO:0055114,GO:0071704,GO:1901576 2.4.1.21 1.384e-199 634.0
CMS1_k127_4855924_1 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001224 529.0
CMS1_k127_4855924_2 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006217 514.0
CMS1_k127_4855924_3 Alternative locus ID - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003549 408.0
CMS1_k127_4855924_4 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 - 2.7.1.71 0.000000000000000000000000000001745 125.0
CMS1_k127_4860311_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1196.0
CMS1_k127_4860311_1 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 2.783e-210 671.0
CMS1_k127_4860311_13 Cytochrome C biogenesis protein transmembrane region K08970 - - 0.0000001104 57.0
CMS1_k127_4860311_2 HELICc2 K03722 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005725 503.0
CMS1_k127_4860311_3 Bacterial transferase hexapeptide (six repeats) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009965 314.0
CMS1_k127_4860311_4 PFAM Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002092 319.0
CMS1_k127_4860311_5 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001647 277.0
CMS1_k127_4860311_6 Universal stress protein family K06149 - - 0.000000000000000000000000000000000000000000000000009451 183.0
CMS1_k127_4860311_7 Prokaryotic N-terminal methylation motif K02456 - - 0.000000000000000000000000000000000000000000166 162.0
CMS1_k127_4860311_8 Chromosomal replication initiator, DnaA K07491 - - 0.00000000000000000000000000001532 119.0
CMS1_k127_4860311_9 Outer membrane protein beta-barrel domain - - - 0.00000000000000000000000001432 117.0
CMS1_k127_486261_0 Protein of unknown function (DUF1566) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001416 413.0
CMS1_k127_486261_1 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - 0.00000000000000000000000000000000000000000000000009373 185.0
CMS1_k127_486261_2 - - - - 0.00000000000000000000000000000000000000000000003136 174.0
CMS1_k127_486261_3 SMART Extracellular solute-binding protein, family 3 K02020 - - 0.00000223 53.0
CMS1_k127_4881076_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 0.0 1214.0
CMS1_k127_4881076_1 TIGRFAM arginyl-tRNA synthetase K01887 GO:0003674,GO:0003824,GO:0004812,GO:0004814,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006420,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.19 2.831e-251 785.0
CMS1_k127_4881076_10 PFAM Tetratricopeptide - - - 0.0000000000000000000000000000000000000000000000000000000000000000003185 235.0
CMS1_k127_4881076_11 PFAM GCN5-related N-acetyltransferase K00619 - 2.3.1.1 0.000000000000000000000000000000000000000000000000000000000000003498 220.0
CMS1_k127_4881076_13 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000000000000005017 146.0
CMS1_k127_4881076_14 PFAM 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.000000000000000000000000000000008784 127.0
CMS1_k127_4881076_15 - - - - 0.000000000000000000000003594 108.0
CMS1_k127_4881076_16 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS K03972 - - 0.0000000000000000000002997 101.0
CMS1_k127_4881076_17 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.0000000000000000000004105 101.0
CMS1_k127_4881076_18 Sporulation related domain - - - 0.00000000001699 72.0
CMS1_k127_4881076_2 Sigma-54 interaction domain K02481 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011 581.0
CMS1_k127_4881076_3 Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source K02224 - 6.3.5.11,6.3.5.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006379 557.0
CMS1_k127_4881076_4 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 GO:0003674,GO:0003824,GO:0004042,GO:0004358,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006592,GO:0006807,GO:0008080,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.3.1.1,2.3.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001028 434.0
CMS1_k127_4881076_5 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001385 424.0
CMS1_k127_4881076_6 lyase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005862 419.0
CMS1_k127_4881076_7 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001091 380.0
CMS1_k127_4881076_8 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007023 336.0
CMS1_k127_4881076_9 Domain of unknown function (DUF4113) K02346,K03502 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007336 317.0
CMS1_k127_4896841_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.9 0.0 1335.0
CMS1_k127_4896841_1 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000457 453.0
CMS1_k127_4896841_2 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005272 326.0
CMS1_k127_4896841_3 TIGRFAM deoxyguanosinetriphosphate triphosphohydrolase K01129 - 3.1.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001538 316.0
CMS1_k127_4896841_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000641 266.0
CMS1_k127_4896841_5 PFAM transcription factor CarD K07736 - - 0.000000000000000000000000000000000000000000000000000000007372 201.0
CMS1_k127_4896841_6 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 GO:0003674,GO:0003824,GO:0004045,GO:0016787,GO:0016788,GO:0052689,GO:0140098,GO:0140101 3.1.1.29 0.0000000000000000000000000000000000000000000000000000001197 200.0
CMS1_k127_4896841_7 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006417,GO:0006518,GO:0006807,GO:0006996,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009628,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0015934,GO:0016043,GO:0017148,GO:0019222,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032991,GO:0034248,GO:0034249,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065003,GO:0065007,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0080090,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904,GO:2000112,GO:2000113 - 0.00000000000000000000000000000000000000000000003233 177.0
CMS1_k127_4896841_8 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 GO:0003674,GO:0003824,GO:0004140,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.1.24 0.0000000000000000000000000000000000002173 148.0
CMS1_k127_4939802_0 Methyl-accepting Chemotaxis protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001582 291.0
CMS1_k127_4939802_1 Nucleotidyltransferase DNA polymerase involved in DNA repair K03502 - - 0.00000000000000000000000000000000000000000000000000000002967 199.0
CMS1_k127_4939802_2 Belongs to the peptidase S24 family K03503 - - 0.0000000000000000000000000000000000000000000000000000004062 196.0
CMS1_k127_4939802_3 DsrE/DsrF-like family - - - 0.0000000000000000000000000000000000000000000000000001519 190.0
CMS1_k127_4939802_4 MgtC family K07507 GO:0008150,GO:0009405,GO:0044419,GO:0051704 - 0.0000000000000000000000000000000000000000007642 161.0
CMS1_k127_4939802_5 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain K07117 - - 0.000004929 52.0
CMS1_k127_4974357_0 Collagenase K08303 - - 2.927e-238 760.0
CMS1_k127_4974357_1 NUDIX domain K01823 - 5.3.3.2 0.00000000000000000000000000000000000000000005194 166.0
CMS1_k127_498_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.0 1122.0
CMS1_k127_498_1 PFAM NAD-dependent glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008588 414.0
CMS1_k127_498_2 PFAM ThiJ PfpI domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002074 357.0
CMS1_k127_498_3 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004874 277.0
CMS1_k127_498_4 carboxymuconolactone decarboxylase - - - 0.00000000000000000000000000000000000000001983 156.0
CMS1_k127_4982919_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 5.363e-203 640.0
CMS1_k127_4982919_1 PFAM glycoside hydrolase, family 77 K00705 - 2.4.1.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001069 598.0
CMS1_k127_4982919_2 PFAM NADPH-dependent FMN reductase - - - 0.00000000000000000000000000000000000000000000000000000002311 202.0
CMS1_k127_4982919_3 Phage integrase, N-terminal SAM-like domain K14059 - - 0.0000000000000000000000000007615 115.0
CMS1_k127_4989362_0 Pyridoxal-dependent decarboxylase, pyridoxal binding domain K01585 - 4.1.1.19 9.769e-314 972.0
CMS1_k127_4989362_1 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 1.792e-234 729.0
CMS1_k127_4989362_10 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 - 2.1.1.190 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001109 324.0
CMS1_k127_4989362_11 Domain of unknown function (DUF1731) K07071 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003364 291.0
CMS1_k127_4989362_12 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000001945 244.0
CMS1_k127_4989362_13 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.000000000000000000000000000000000000000000000000001043 203.0
CMS1_k127_4989362_14 CheY-like receiver, AAA-type ATPase and DNA-binding domain-containing response regulator - - - 0.0000000000000000000000000000000000000000000000009957 190.0
CMS1_k127_4989362_15 histidine kinase, dimerisation and phosphoacceptor region - - - 0.00000000000000001691 96.0
CMS1_k127_4989362_2 ABC-type oligopeptide transport system periplasmic component K13893 - - 1.035e-204 655.0
CMS1_k127_4989362_3 PFAM Saccharopine dehydrogenase K00290 - 1.5.1.7 4.604e-194 612.0
CMS1_k127_4989362_4 PFAM Polysulphide reductase, NrfD K00185 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000495 539.0
CMS1_k127_4989362_5 PFAM Binding-protein-dependent transport system inner membrane component K13894 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001201 538.0
CMS1_k127_4989362_6 Pyridoxal-dependent decarboxylase, C-terminal sheet domain K13747 - 4.1.1.96 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006568 492.0
CMS1_k127_4989362_7 PFAM Binding-protein-dependent transport system inner membrane component K13895 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002974 456.0
CMS1_k127_4989362_9 Belongs to the arginase family K01476,K01479,K01480,K12255,K18459 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006576,GO:0006595,GO:0006596,GO:0006807,GO:0008150,GO:0008152,GO:0008783,GO:0009058,GO:0009308,GO:0009309,GO:0009445,GO:0009446,GO:0009987,GO:0016787,GO:0016810,GO:0016813,GO:0030145,GO:0034641,GO:0042401,GO:0043167,GO:0043169,GO:0044106,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0071704,GO:0097164,GO:1901564,GO:1901566,GO:1901576 3.5.3.1,3.5.3.11,3.5.3.17,3.5.3.7,3.5.3.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000611 325.0
CMS1_k127_5014418_0 Sulphur transport K07112 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005015 340.0
CMS1_k127_5014418_1 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003845 267.0
CMS1_k127_5014418_2 PFAM SEC-C motif K09858 - - 0.00000000000000000000000000000000000000000005188 165.0
CMS1_k127_5014418_3 Major facilitator superfamily - - - 0.000000000000000000000000000000000000007778 161.0
CMS1_k127_5014418_4 alginic acid biosynthetic process - - - 0.0000000000000000000000000000002633 136.0
CMS1_k127_5014418_5 peptidyl-tyrosine sulfation - - - 0.0000002343 60.0
CMS1_k127_5021949_0 Involved in the tonB-independent uptake of proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000053 438.0
CMS1_k127_5021949_1 D-Ala-D-Ala carboxypeptidase 3 (S13) family K07259 - 3.4.16.4 0.000000000000000000000000114 117.0
CMS1_k127_5021949_2 rhodanese - - - 0.00007896 53.0
CMS1_k127_5024282_0 reductase, alpha subunit K00394 - 1.8.99.2 0.0 1350.0
CMS1_k127_5024282_1 Elongation factor Tu domain 2 K06207 - - 1.14e-295 917.0
CMS1_k127_5024282_10 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002434 440.0
CMS1_k127_5024282_11 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 GO:0000270,GO:0003674,GO:0003824,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008765,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0030203,GO:0034645,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 6.3.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001194 441.0
CMS1_k127_5024282_12 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002033 416.0
CMS1_k127_5024282_13 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000539 359.0
CMS1_k127_5024282_14 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0070475,GO:0071424,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.199 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004091 332.0
CMS1_k127_5024282_15 reductase, beta subunit K00395 - 1.8.99.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001707 292.0
CMS1_k127_5024282_16 Cell wall formation K00075 - 1.3.1.98 0.000000000000000000000000000000000000000000000000000000000000000000000007491 253.0
CMS1_k127_5024282_17 Penicillin-binding Protein dimerisation domain K03587 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000001864 257.0
CMS1_k127_5024282_18 Belongs to the MraZ family K03925 GO:0000976,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031333,GO:0043254,GO:0043565,GO:0044087,GO:0044212,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2000142,GO:2000143,GO:2001141 - 0.000000000000000000000000000000000000000000000000000000000000003207 220.0
CMS1_k127_5024282_19 Essential cell division protein K03589 - - 0.000000000000000000000000000000000000000000000000000756 194.0
CMS1_k127_5024282_2 Belongs to the MurCDEF family K01924 - 6.3.2.8 4.856e-195 617.0
CMS1_k127_5024282_20 Spermine/spermidine synthase domain - - - 0.0000000000000000000000007529 108.0
CMS1_k127_5024282_3 FAD dependent oxidoreductase K16885 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001322 586.0
CMS1_k127_5024282_4 PFAM Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001794 587.0
CMS1_k127_5024282_5 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001274 569.0
CMS1_k127_5024282_6 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001736 541.0
CMS1_k127_5024282_7 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002034 501.0
CMS1_k127_5024282_8 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000335 486.0
CMS1_k127_5024282_9 Putative zinc- or iron-chelating domain K06940 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006477 443.0
CMS1_k127_5050912_0 TIGRFAM lipopolysaccharide heptosyltransferase II K02843 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008165 374.0
CMS1_k127_5050912_1 Belongs to the universal ribosomal protein uS2 family K02967 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004129 357.0
CMS1_k127_5050912_2 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004084 323.0
CMS1_k127_5050912_3 Catalyzes the reversible phosphorylation of UMP to UDP K09903 GO:0003674,GO:0003824,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901576 2.7.4.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001489 317.0
CMS1_k127_5050912_4 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001466 308.0
CMS1_k127_5050912_5 D,D-heptose 1,7-bisphosphate phosphatase K03273 - 3.1.3.82,3.1.3.83 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001286 288.0
CMS1_k127_5050912_6 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 GO:0002181,GO:0002184,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043021,GO:0043023,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0044877,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001826 261.0
CMS1_k127_5050912_7 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006721,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016114,GO:0016491,GO:0016614,GO:0016616,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0030145,GO:0030604,GO:0032787,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046490,GO:0046872,GO:0046914,GO:0048037,GO:0050661,GO:0050662,GO:0051483,GO:0051484,GO:0055114,GO:0070402,GO:0071704,GO:0090407,GO:0097159,GO:1901135,GO:1901265,GO:1901363,GO:1901576 1.1.1.267 0.00000000000000000000000000000000000000000000000000000000000000002264 227.0
CMS1_k127_5050912_8 Belongs to the CDS family K00981 - 2.7.7.41 0.00000000000000000000000000000000000000000000000000000000000009449 225.0
CMS1_k127_5050912_9 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic K05589,K13052 - - 0.00000001095 61.0
CMS1_k127_5083696_0 glycyl-tRNA synthetase, beta K01879 - 6.1.1.14 1.815e-228 727.0
CMS1_k127_5083696_1 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 GO:0003674,GO:0003824,GO:0004019,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046033,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.4 4.695e-217 681.0
CMS1_k127_5083696_10 PFAM response regulator receiver - - - 0.00000000000000000000000000000000000000000000001004 173.0
CMS1_k127_5083696_11 Protein chain release factor B K15034 - - 0.00000000000000000000000000000000000000000000004727 173.0
CMS1_k127_5083696_12 Pfam:TPM K08988 - - 0.00000000000000000000000000000000000000000000005707 178.0
CMS1_k127_5083696_13 Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate - - - 0.0000000000000000000000000000000000000000000002392 171.0
CMS1_k127_5083696_14 Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters K06204 - - 0.0000000000000000000000000000000000000000000004494 169.0
CMS1_k127_5083696_15 Cyclic phosphodiesterase-like - - - 0.0000000000000000000000000003639 120.0
CMS1_k127_5083696_16 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 - 2.7.7.6 0.000000000000000000000001707 106.0
CMS1_k127_5083696_17 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116,K03117 - - 0.0000000000008097 73.0
CMS1_k127_5083696_18 FHA domain K07315 - 3.1.3.3 0.000000002614 65.0
CMS1_k127_5083696_2 Galactose-1-phosphate uridyl transferase, N-terminal domain K00965 - 2.7.7.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000574 548.0
CMS1_k127_5083696_3 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003345 482.0
CMS1_k127_5083696_4 auxin efflux carrier K07088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001718 368.0
CMS1_k127_5083696_5 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008014 334.0
CMS1_k127_5083696_6 Converts GTP to 7,8-dihydroneopterin triphosphate K09007 - 3.5.4.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000759 300.0
CMS1_k127_5083696_7 CO dehydrogenase acetyl-CoA synthase gamma subunit (Corrinoid Fe-S protein) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004964 271.0
CMS1_k127_5083696_8 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.0000000000000000000000000000000000000000000000000000000000000000000227 239.0
CMS1_k127_5083696_9 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.000000000000000000000000000000000000000000000000000001146 196.0
CMS1_k127_5085400_0 PFAM CoA-binding domain protein K01905,K22224 - 6.2.1.13 1.292e-314 977.0
CMS1_k127_5085400_1 PFAM Acetyl-CoA hydrolase transferase - - - 2.271e-305 945.0
CMS1_k127_5085400_2 PFAM Bacterial regulatory protein, Fis family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002731 494.0
CMS1_k127_5085400_3 Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin K01151 GO:0003674,GO:0003824,GO:0003906,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008081,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016788,GO:0033554,GO:0034641,GO:0042578,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 3.1.21.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002876 354.0
CMS1_k127_5085400_4 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase - - - 0.000000000000000000000000000000000000000000000000009488 191.0
CMS1_k127_5085400_5 epimerase dehydratase K19997 - 5.1.3.26 0.0000000000000000000000000000000004583 135.0
CMS1_k127_5092822_0 TIGRFAM transporter, hydrophobe amphiphile efflux-1 (HAE1) family K03296,K18138 - - 0.0 1359.0
CMS1_k127_5092822_1 TIGRFAM RND efflux system, outer membrane lipoprotein, NodT family K18139 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003564 500.0
CMS1_k127_5117862_0 DEAD DEAH box helicase domain protein K06877 - - 0.0 1072.0
CMS1_k127_5117862_1 HD domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007037 494.0
CMS1_k127_5117862_2 PFAM glutaredoxin - - - 0.000000000000000000000000000000000000000000000000000000000000000009188 235.0
CMS1_k127_5117862_3 Protein of unknown function (DUF3047) - - - 0.00000000000000000000000000000000000000000000000000000000000003373 221.0
CMS1_k127_5117862_4 SH3 domain - - - 0.000000000000000000000000000000000000007222 150.0
CMS1_k127_5148301_0 Protein tyrosine kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001217 322.0
CMS1_k127_5148301_1 PFAM Formylglycine-generating sulfatase enzyme - - - 0.0000000000000000000000000000000000000000000000000000000002117 224.0
CMS1_k127_5148301_2 Histidine kinase K02668,K07709,K07710 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000008578 218.0
CMS1_k127_5148301_3 PFAM conserved - GO:0008150,GO:0009314,GO:0009628,GO:0050896 - 0.000000000000000000000000000000000000000000003256 168.0
CMS1_k127_5148301_4 acetyltransferases and hydrolases with the alpha beta hydrolase fold - - - 0.0000000000000000000000002738 122.0
CMS1_k127_5148301_5 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000385 65.0
CMS1_k127_5148301_6 Inner membrane component of T3SS, cytoplasmic domain - GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005618,GO:0005623,GO:0005886,GO:0006109,GO:0006110,GO:0006140,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009889,GO:0009890,GO:0009892,GO:0009894,GO:0009895,GO:0009987,GO:0010563,GO:0010675,GO:0010677,GO:0016020,GO:0016310,GO:0019219,GO:0019220,GO:0019222,GO:0019538,GO:0030312,GO:0030808,GO:0030809,GO:0030811,GO:0030812,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031329,GO:0031330,GO:0036211,GO:0042325,GO:0042326,GO:0042802,GO:0043170,GO:0043412,GO:0043457,GO:0043467,GO:0043470,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0045820,GO:0045912,GO:0045934,GO:0045936,GO:0045980,GO:0046777,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051174,GO:0051193,GO:0051195,GO:0051196,GO:0051198,GO:0062012,GO:0062014,GO:0065007,GO:0071704,GO:0071944,GO:0080090,GO:1900371,GO:1900372,GO:1900542,GO:1900543,GO:1901564,GO:1903578,GO:1903579,GO:2001169,GO:2001170 - 0.000000000155 67.0
CMS1_k127_5165141_0 Heat shock 70 kDa protein K04043 - - 0.0 1057.0
CMS1_k127_5165141_1 TIGRFAM tryptophanyl-tRNA synthetase K01867 - 6.1.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006245 514.0
CMS1_k127_5165141_2 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 GO:0000166,GO:0000774,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0017076,GO:0030234,GO:0030554,GO:0036094,GO:0044424,GO:0044444,GO:0044464,GO:0050790,GO:0051082,GO:0060589,GO:0060590,GO:0065007,GO:0065009,GO:0097159,GO:0098772,GO:1901265,GO:1901363 - 0.0000000000000000000000000000000000000000000000002473 182.0
CMS1_k127_5165141_3 PFAM thioesterase superfamily protein - - - 0.0000000000000000000000000001493 117.0
CMS1_k127_5167428_0 A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit contributes ATPase, 3'-5' helicase, exonuclease activity and loads RecA onto ssDNA K03582,K16898 - 3.1.11.5,3.6.4.12 5.451e-252 819.0
CMS1_k127_5167428_1 A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity K03583 - 3.1.11.5 4.596e-250 807.0
CMS1_k127_5167428_10 - - - - 0.000000000000000000000000001536 120.0
CMS1_k127_5167428_2 type II secretion system protein E - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003349 595.0
CMS1_k127_5167428_3 galactose-1-phosphate uridylyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001891 582.0
CMS1_k127_5167428_4 helicase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001899 535.0
CMS1_k127_5167428_5 CheY-like receiver, AAA-type ATPase and DNA-binding domain-containing response regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001966 252.0
CMS1_k127_5167428_6 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000001732 222.0
CMS1_k127_5167428_7 HAMP domain - - - 0.0000000000000000000000000000000000000000000000000000000006676 212.0
CMS1_k127_5167428_8 Ras family K06883 - - 0.00000000000000000000000000000000000000000000000003651 181.0
CMS1_k127_5167428_9 chlorophyll binding - - - 0.0000000000000000000000000001053 126.0
CMS1_k127_5203296_0 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K02945,K03527 - 1.17.7.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002561 422.0
CMS1_k127_5203296_1 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03110 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003418 403.0
CMS1_k127_5203296_2 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 - 1.1.1.85 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009966 397.0
CMS1_k127_5203296_3 PFAM Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002303 361.0
CMS1_k127_5203296_4 Tellurite resistance protein TerB K05801 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001444 317.0
CMS1_k127_5203296_5 Uncharacterised conserved protein (DUF2156) K01163 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000116 301.0
CMS1_k127_5203296_6 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000001269 257.0
CMS1_k127_5203296_7 Belongs to the Fur family K03711 - - 0.0000000000000000000000000000000000000000000000002368 185.0
CMS1_k127_5203296_8 Protein of unknown function (DUF1178) - - - 0.000000000000000000000000000001305 125.0
CMS1_k127_5210101_0 transporter of a GTP-driven Fe(2 ) uptake system K04759 - - 5.296e-289 903.0
CMS1_k127_5210101_1 Belongs to the GPI family K01810 - 5.3.1.9 2.489e-204 649.0
CMS1_k127_5210101_10 Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis-dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3- dehydroshikimate K03785 - 4.2.1.10 0.000000000000000000000000000000000000000000000000000000000006235 214.0
CMS1_k127_5210101_11 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP K19221 - 2.5.1.17 0.000000000000000000000000000000000000000000000000002178 187.0
CMS1_k127_5210101_12 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.000000000000000000000000000000000000000000000001119 179.0
CMS1_k127_5210101_13 PFAM FeoA K04758 - - 0.000000000000000000000000000001951 122.0
CMS1_k127_5210101_14 PilZ domain - - - 0.00000000000000000008891 93.0
CMS1_k127_5210101_2 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000459 578.0
CMS1_k127_5210101_3 PFAM peptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008556 499.0
CMS1_k127_5210101_4 Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX K00231 - 1.3.3.15,1.3.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007883 483.0
CMS1_k127_5210101_5 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001448 473.0
CMS1_k127_5210101_6 PFAM Dynamin family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002415 471.0
CMS1_k127_5210101_7 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770,K12506 - 2.7.7.60,4.6.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004245 341.0
CMS1_k127_5210101_8 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 - 1.1.1.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005959 328.0
CMS1_k127_5210101_9 NAD(P)H dehydrogenase (quinone) activity - - - 0.000000000000000000000000000000000000000000000000000000000000000008022 236.0
CMS1_k127_5268456_0 radical SAM domain protein K22318 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005411 537.0
CMS1_k127_5268456_1 PFAM ATP-binding region ATPase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002559 347.0
CMS1_k127_5268456_2 PFAM response regulator receiver - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002093 309.0
CMS1_k127_5268456_3 helix_turn_helix, arabinose operon control protein - - - 0.000000000000002742 78.0
CMS1_k127_5300_0 type II secretion system protein E K02454 - - 1.731e-210 664.0
CMS1_k127_5300_1 type II and III secretion system protein K02453 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008842 572.0
CMS1_k127_5300_2 General secretion pathway protein F K02455,K02653 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007487 306.0
CMS1_k127_5300_3 protein transport across the cell outer membrane K02452,K02463 GO:0002790,GO:0006810,GO:0008104,GO:0008150,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0032940,GO:0033036,GO:0042886,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0071702,GO:0071705 - 0.000000000000000000000000000000000001457 150.0
CMS1_k127_5314324_0 Belongs to the catalase family K03781 - 1.11.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001888 492.0
CMS1_k127_5314324_1 PFAM sigma-54 factor interaction domain-containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005498 493.0
CMS1_k127_5314324_2 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002055 502.0
CMS1_k127_5314324_3 Protein of unknown function (DUF1566) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000145 420.0
CMS1_k127_5314324_4 serves to protect cells from the toxic effects of hydrogen peroxide K03781 - 1.11.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001792 352.0
CMS1_k127_5314324_5 Receptor family ligand binding region K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003285 351.0
CMS1_k127_5314324_6 Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002992 258.0
CMS1_k127_5314324_7 - - - - 0.00000000000000000000000000000000000000007662 154.0
CMS1_k127_5314324_9 membrane protein (homolog of Drosophila rhomboid) - - - 0.00000005773 62.0
CMS1_k127_5328723_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 1.054e-315 977.0
CMS1_k127_5328723_1 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657,K13503 - 4.1.3.27 1.344e-197 628.0
CMS1_k127_5328723_10 Belongs to the TrpF family K01817 - 5.3.1.24 0.00000000000000000000000000000000000000000000000000000000000000000005997 237.0
CMS1_k127_5328723_11 - - - - 0.000000000000000000000000000000000000000000000000000000000000000007916 233.0
CMS1_k127_5328723_12 Domain of unknown function (DUF374) K09778 - - 0.0000000000000000000000000000000000000000000000000005095 192.0
CMS1_k127_5328723_14 Binds directly to 16S ribosomal RNA K02968 - - 0.00000000000000000002421 93.0
CMS1_k127_5328723_15 Gram-negative-bacterium-type cell wall biogenesis - - - 0.000000005855 65.0
CMS1_k127_5328723_2 B12 binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001846 553.0
CMS1_k127_5328723_3 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008218 534.0
CMS1_k127_5328723_4 Iron-sulfur cluster-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002533 488.0
CMS1_k127_5328723_5 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal K00648 - 2.3.1.180 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000285 484.0
CMS1_k127_5328723_6 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766,K13497 GO:0000162,GO:0003674,GO:0003824,GO:0004048,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.18,4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001731 434.0
CMS1_k127_5328723_7 TIGRFAM glutamine amidotransferase of anthranilate synthase K01658,K01664 - 2.6.1.85,4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001065 327.0
CMS1_k127_5328723_8 Belongs to the TrpC family K01609,K13498 - 4.1.1.48,5.3.1.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001197 310.0
CMS1_k127_5328723_9 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004813 298.0
CMS1_k127_5335806_0 D-isomer specific 2-hydroxyacid dehydrogenase catalytic K00058 - 1.1.1.399,1.1.1.95 7.004e-263 817.0
CMS1_k127_5335806_1 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237,GO:0050515 2.7.1.148 0.000000000000000000000000000000000000000000000000000000000000000001659 236.0
CMS1_k127_5335806_2 Domain of unknown function (DUF1844) - - - 0.0000000000000000000000000000000000005063 142.0
CMS1_k127_5398032_0 Belongs to the IlvD Edd family K01687 - 4.2.1.9 5.872e-300 926.0
CMS1_k127_5398032_1 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001348 590.0
CMS1_k127_5398032_10 - - - - 0.0000000000000000000000002987 108.0
CMS1_k127_5398032_11 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00003749 51.0
CMS1_k127_5398032_2 Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002088 471.0
CMS1_k127_5398032_3 Transglycosylase SLT domain K08305 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003487 404.0
CMS1_k127_5398032_4 3'(2'),5'-bisphosphate nucleotidase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001107 384.0
CMS1_k127_5398032_5 PFAM Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000743 306.0
CMS1_k127_5398032_6 thiolester hydrolase activity K01563 - 3.8.1.5 0.000000000000000000000000000000000000000000000007542 179.0
CMS1_k127_5398032_7 PFAM Response regulator receiver domain - - - 0.00000000000000000000000000000000000000000000419 171.0
CMS1_k127_5398032_8 Cytidine and deoxycytidylate deaminase zinc-binding region - - - 0.0000000000000000000000000000000000000002171 153.0
CMS1_k127_5398032_9 Yqey-like protein K09117 - - 0.000000000000000000000000000000000003396 142.0
CMS1_k127_5412365_0 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K04042,K11528 - 2.3.1.157,2.7.7.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004676 312.0
CMS1_k127_5412365_1 Involved in DNA repair and RecF pathway recombination K03584 - - 0.00000000000000000000000000000000000000000000000000000000002526 214.0
CMS1_k127_5412365_2 Ribose/Galactose Isomerase - - - 0.0000000000000000000000000000000000000000000000000000012 195.0
CMS1_k127_542017_0 type II secretion system K02454 - - 3.505e-231 729.0
CMS1_k127_542017_1 Tfp pilus assembly protein tip-associated adhesin K02674 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001301 605.0
CMS1_k127_542017_2 Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene K03664 - - 0.0000000000000000000000000000000000000000000000000000000000001844 214.0
CMS1_k127_542017_3 PFAM integrase family protein - - - 0.000000000005988 67.0
CMS1_k127_542017_4 Type IV minor pilin ComP, DNA uptake sequence receptor K02655 - - 0.0000000107 62.0
CMS1_k127_542017_5 COG4966 Tfp pilus assembly protein PilW K02672 - - 0.0000001252 63.0
CMS1_k127_542017_6 PilX N-terminal - - - 0.0000003125 60.0
CMS1_k127_542017_7 Metallo-beta-lactamase superfamily - - - 0.000001371 51.0
CMS1_k127_5420546_0 DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation K05592 - 3.6.4.13 5.746e-238 748.0
CMS1_k127_5420546_1 SMART PDZ DHR GLGF domain protein K11749 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001837 451.0
CMS1_k127_5420546_10 PFAM Glycosyl transferases group 1 - - - 0.00000000004462 74.0
CMS1_k127_5420546_11 methyltransferase - - - 0.00000004834 61.0
CMS1_k127_5420546_2 Glycosyltransferase family 9 (heptosyltransferase) K02841 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002399 391.0
CMS1_k127_5420546_3 Nad-dependent epimerase dehydratase K01784 - 5.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009488 357.0
CMS1_k127_5420546_4 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001271 325.0
CMS1_k127_5420546_5 Xylose isomerase-like TIM barrel - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004793 310.0
CMS1_k127_5420546_6 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006721,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016114,GO:0016491,GO:0016614,GO:0016616,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0030145,GO:0030604,GO:0032787,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046490,GO:0046872,GO:0046914,GO:0048037,GO:0050661,GO:0050662,GO:0051483,GO:0051484,GO:0055114,GO:0070402,GO:0071704,GO:0090407,GO:0097159,GO:1901135,GO:1901265,GO:1901363,GO:1901576 1.1.1.267 0.0000000000000000000000000000000000000000000000000000000000000000000000000000173 265.0
CMS1_k127_5420546_7 PFAM peptidase M22 glycoprotease K01409,K14742 - 2.3.1.234 0.0000000000000000000000000000000000000000000000000000000000000002985 228.0
CMS1_k127_5420546_8 Glycosyl transferases group 1 K02844 - - 0.00000000000000000000000000000000000000000004922 176.0
CMS1_k127_5420546_9 tetraacyldisaccharide 4'-kinase activity K09791 - - 0.00000000000000000002488 91.0
CMS1_k127_5459199_0 oxidoreductase, alpha subunit K00174 - 1.2.7.11,1.2.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003735 533.0
CMS1_k127_5459199_1 Hypothetical methyltransferase K07755 - 2.1.1.137 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002628 451.0
CMS1_k127_5459199_2 PFAM Thiamine pyrophosphate K00175 - 1.2.7.11,1.2.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009222 428.0
CMS1_k127_5459199_3 4Fe-4S ferredoxin, iron-sulfur binding K00176 - 1.2.7.3 0.000000000000000000000000003896 113.0
CMS1_k127_5459199_4 PFAM pyruvate ferredoxin flavodoxin oxidoreductase K00177 - 1.2.7.3 0.000006353 50.0
CMS1_k127_5477784_0 Haem-binding uptake, Tiki superfamily, ChaN - - - 1.206e-200 662.0
CMS1_k127_5477784_1 Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs K04094 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 2.1.1.74 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005534 596.0
CMS1_k127_5477784_10 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.0000000000000000000000000000000000000000000000000000001809 198.0
CMS1_k127_5477784_11 Uracil DNA glycosylase superfamily K21929 - 3.2.2.27 0.00000000000000000000000000000000000000000000001762 180.0
CMS1_k127_5477784_12 - - - - 0.0000000000000000002057 94.0
CMS1_k127_5477784_13 - - - - 0.000000000000000004958 99.0
CMS1_k127_5477784_14 ABC transporter substrate binding protein K01989 - - 0.00000000000677 76.0
CMS1_k127_5477784_15 protein kinase activity - - - 0.0004191 52.0
CMS1_k127_5477784_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003648 541.0
CMS1_k127_5477784_3 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 GO:0003674,GO:0003824,GO:0004017,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901576 2.7.4.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007551 357.0
CMS1_k127_5477784_4 Cytochrome c3 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006529 333.0
CMS1_k127_5477784_5 anaerobic electron transport chain - GO:0003674,GO:0003824,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009061,GO:0009987,GO:0015980,GO:0016491,GO:0019645,GO:0022900,GO:0022904,GO:0044237,GO:0045333,GO:0055114 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004313 351.0
CMS1_k127_5477784_6 Voltage gated chloride channel K03281 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001021 311.0
CMS1_k127_5477784_7 Sel1-like repeats. K07126 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001161 310.0
CMS1_k127_5477784_8 photoreceptor activity K13924 - 2.1.1.80,3.1.1.61 0.0000000000000000000000000000000000000000000000000000000000000006671 242.0
CMS1_k127_5477784_9 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.000000000000000000000000000000000000000000000000000000000001291 235.0
CMS1_k127_549819_0 PFAM Pyridine nucleotide-disulphide oxidoreductase K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.0 1435.0
CMS1_k127_549819_1 PFAM molybdopterin oxidoreductase K00123,K05299 - 1.17.1.10,1.17.1.9 1.505e-224 701.0
CMS1_k127_549819_2 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine K00831 - 2.6.1.52 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001892 584.0
CMS1_k127_549819_3 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140101,GO:0140102,GO:1901360 2.1.1.192 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001976 446.0
CMS1_k127_549819_4 PFAM Radical SAM domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002061 370.0
CMS1_k127_549819_5 Methyl-viologen-reducing hydrogenase, delta subunit K14127 - 1.8.98.5,1.8.98.6 0.00000000000000000000000000000000000000056 151.0
CMS1_k127_549819_6 Methyl-viologen-reducing hydrogenase, delta subunit K14127 - 1.8.98.5,1.8.98.6 0.00000000000000000000000000000000002 135.0
CMS1_k127_549819_7 PFAM Pyridine nucleotide-disulphide oxidoreductase K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.00000000000000000000007564 99.0
CMS1_k127_549819_8 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.000000000001931 72.0
CMS1_k127_5511610_0 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001431 414.0
CMS1_k127_5511610_1 Belongs to the Glu Leu Phe Val dehydrogenases family K00261 - 1.4.1.3 0.0000000000000000000000000000000000000000000000000000000000000000003412 241.0
CMS1_k127_5511610_2 alginic acid biosynthetic process - - - 0.00000000000000000000000000000000000000000000000000000000000000001558 236.0
CMS1_k127_5511610_3 alginic acid biosynthetic process - - - 0.00000000000000000000000000000000000000000000000000000000000000642 231.0
CMS1_k127_5511610_5 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.00000000000004776 72.0
CMS1_k127_5536129_0 Belongs to the alpha-IPM synthase homocitrate synthase family K01649 - 2.3.3.13 3.167e-248 775.0
CMS1_k127_5536129_1 PFAM Cys Met metabolism K01740 - 2.5.1.49 3.236e-229 717.0
CMS1_k127_5536129_10 PFAM Mammalian cell entry related domain protein K02067 - - 0.00000000000000000000000000000000000000000006127 164.0
CMS1_k127_5536129_11 thioredoxin peroxidase activity K11065 - 1.11.1.15 0.0000000000000000000000000000000000000006073 156.0
CMS1_k127_5536129_12 - - - - 0.00000000000000000000000000000000000005085 145.0
CMS1_k127_5536129_13 intermembrane phospholipid transfer K07323 - - 0.0000000000000000000000000000000000002343 148.0
CMS1_k127_5536129_14 Isoprenylcysteine carboxyl methyltransferase (ICMT) family - - - 0.0000000000000000000000000000000001012 148.0
CMS1_k127_5536129_15 Uncharacterized ACR, COG1399 K07040 - - 0.000000000000000000000005181 106.0
CMS1_k127_5536129_16 - - - - 0.0000000000000000000001867 102.0
CMS1_k127_5536129_17 Cyclic nucleotide-monophosphate binding domain - - - 0.00000000000000001195 88.0
CMS1_k127_5536129_18 photosystem II stabilization K02237 - - 0.00000000009761 68.0
CMS1_k127_5536129_19 Single cache domain 3 - - - 0.00001102 49.0
CMS1_k127_5536129_2 Belongs to the aspartokinase family K00928 - 2.7.2.4 5.043e-199 626.0
CMS1_k127_5536129_3 Permease MlaE K02066 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000508 390.0
CMS1_k127_5536129_4 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001762 392.0
CMS1_k127_5536129_5 PFAM ABC transporter K02065 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003434 357.0
CMS1_k127_5536129_6 Peptidase family M23 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006509 361.0
CMS1_k127_5536129_7 PFAM VacJ family lipoprotein K04754 - - 0.000000000000000000000000000000000000000000000000000000000000000006718 235.0
CMS1_k127_5536129_8 Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide K03216 - 2.1.1.207 0.00000000000000000000000000000000000000000000000000000000000000002576 226.0
CMS1_k127_5536129_9 Protein of unknown function (DUF3108) - - - 0.0000000000000000000000000000000000000000000000000000000000005014 219.0
CMS1_k127_5543006_0 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 GO:0003674,GO:0003824,GO:0004478,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016740,GO:0016765,GO:0044424,GO:0044444,GO:0044464 2.5.1.6 8.495e-212 662.0
CMS1_k127_5543006_1 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.000000000000000000000000000000000000000000000000000000000001092 220.0
CMS1_k127_5543006_2 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 GO:0000096,GO:0003674,GO:0003824,GO:0004013,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009069,GO:0009116,GO:0009119,GO:0009987,GO:0016787,GO:0016801,GO:0016802,GO:0017144,GO:0019752,GO:0033353,GO:0034641,GO:0042278,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046128,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564,GO:1901605,GO:1901657 3.3.1.1 0.00000000000000000000000004258 107.0
CMS1_k127_5557683_0 Patatin-like phospholipase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002609 444.0
CMS1_k127_5557683_1 Response regulator, receiver - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002956 400.0
CMS1_k127_5557683_10 - - - - 0.00000000000000000000107 97.0
CMS1_k127_5557683_11 Pas domain - - - 0.000000000000000000007141 108.0
CMS1_k127_5557683_12 Domain of unknown function (DUF1737) - - - 0.0000000000000000004776 89.0
CMS1_k127_5557683_13 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000000000000001032 88.0
CMS1_k127_5557683_14 - - - - 0.00000000000001808 81.0
CMS1_k127_5557683_15 ISXO2-like transposase domain K07488 - - 0.000000000001516 68.0
CMS1_k127_5557683_16 Protein of unknown function (DUF2892) - - - 0.0000000004921 60.0
CMS1_k127_5557683_18 Transposase and inactivated derivatives K07488 - - 0.0000002778 52.0
CMS1_k127_5557683_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007634 385.0
CMS1_k127_5557683_3 Mycolic acid cyclopropane synthetase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007238 284.0
CMS1_k127_5557683_4 Protein of unknown function (DUF4197) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001418 267.0
CMS1_k127_5557683_5 Methyltransferase type 11 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000007571 245.0
CMS1_k127_5557683_7 CARDB domain-containing protein,subtilase family protease - - - 0.000000000000000000000000000000000000000000000000000001083 205.0
CMS1_k127_5557683_8 MCP methyltransferase, CheR-type K00575 - 2.1.1.80 0.000000000000000000000000000000000000001817 153.0
CMS1_k127_5557683_9 Domain of unknown function (DUF4382) - - - 0.00000000000000000000000000000000001089 149.0
CMS1_k127_5568299_0 DNA polymerase III alpha subunit K02337,K14162 GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0031668,GO:0033554,GO:0050896,GO:0051716,GO:0071496 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000113 426.0
CMS1_k127_5568299_1 transposase activity - - - 0.000000000000000000000000000000000000000000000000009023 181.0
CMS1_k127_5568299_2 Antitoxin Phd_YefM, type II toxin-antitoxin system - - - 0.0000000000000000000000000000001849 125.0
CMS1_k127_5568299_3 ParE toxin of type II toxin-antitoxin system, parDE - - - 0.00000000000000000000001515 100.0
CMS1_k127_5600746_0 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 5.868e-269 837.0
CMS1_k127_5600746_1 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 GO:0003674,GO:0003824,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016491,GO:0016725,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046429,GO:0046490,GO:0052592,GO:0055114,GO:0071704,GO:0090407,GO:1901135,GO:1901576 1.17.7.1,1.17.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009729 573.0
CMS1_k127_5600746_2 AIR synthase related protein, N-terminal domain K04655 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000007654 252.0
CMS1_k127_5602808_0 transport system K01992 - - 0.0 1264.0
CMS1_k127_5602808_1 Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis K01042 GO:0003674,GO:0003824,GO:0004125,GO:0006139,GO:0006399,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016740,GO:0016785,GO:0018130,GO:0019438,GO:0032774,GO:0034641,GO:0034654,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0046483,GO:0071704,GO:0090304,GO:0097056,GO:0140098,GO:0140101,GO:1901360,GO:1901362,GO:1901576 2.9.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003339 544.0
CMS1_k127_5602808_2 pfam abc K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004182 384.0
CMS1_k127_5602808_3 TPR repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000255 374.0
CMS1_k127_5602808_4 Belongs to the LOG family K06966 - 3.2.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008045 321.0
CMS1_k127_5602808_5 Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine K00684 - 2.3.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004786 282.0
CMS1_k127_5602808_6 Domain of unknown function (DUF4340) - - - 0.0000000000000000000000000000000000000000000000001398 186.0
CMS1_k127_5615086_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 1.318e-198 627.0
CMS1_k127_5615086_1 TIGRFAM DNA protecting protein DprA K04096 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005753 310.0
CMS1_k127_5615086_2 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.000000000000000000000000000000000002644 139.0
CMS1_k127_5622106_0 beta-lactamase activity K07126 - - 0.0000000000000000000000000000004576 138.0
CMS1_k127_5622106_1 Psort location CytoplasmicMembrane, score K12132 - 2.7.11.1 0.000002201 62.0
CMS1_k127_5630120_0 PFAM peptidase K08303 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005977 561.0
CMS1_k127_5630120_1 Polysulphide reductase, NrfD - - - 0.000000000000000000000000000000000000000000000000000001895 192.0
CMS1_k127_5630120_2 PFAM Ubiquitin-conjugating - - - 0.0000000000000000001924 104.0
CMS1_k127_5654709_0 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K00058 - 1.1.1.399,1.1.1.95 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007413 477.0
CMS1_k127_5654709_1 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001488 343.0
CMS1_k127_5654709_2 membrane transporter protein K07090 - - 0.0000000000000000000000000000006781 126.0
CMS1_k127_5666143_0 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.0 1479.0
CMS1_k127_5666143_1 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.0 1016.0
CMS1_k127_5666143_10 Belongs to the UPF0235 family K09131 - - 0.000000000000000000008191 94.0
CMS1_k127_5666143_11 HIT domain K19710 - 2.7.7.53 0.00000000000000003702 84.0
CMS1_k127_5666143_12 Type II transport protein GspH K08084 - - 0.0001843 52.0
CMS1_k127_5666143_2 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 5.669e-272 850.0
CMS1_k127_5666143_3 N-acetylmuramoyl-L-alanine amidase K01448 - 3.5.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004078 471.0
CMS1_k127_5666143_4 nucleic acid binding OB-fold tRNA helicase-type K03698 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004556 335.0
CMS1_k127_5666143_5 PFAM PSP1 domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005462 310.0
CMS1_k127_5666143_6 TIGRFAM DNA polymerase III, delta K02341 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005482 296.0
CMS1_k127_5666143_7 Calcineurin-like phosphoesterase superfamily domain K07095 - - 0.000000000000000000000000000000000000000000000007006 176.0
CMS1_k127_5666143_8 YGGT family K02221 - - 0.00000000000000000000000000000000000000006707 152.0
CMS1_k127_5666143_9 DivIVA protein K04074 - - 0.0000000000000000000004873 107.0
CMS1_k127_5667575_0 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003505 458.0
CMS1_k127_5667575_1 Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation K09773 - 2.7.11.33,2.7.4.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005218 377.0
CMS1_k127_5667575_2 TIGRFAM hydrolase, TatD family K03424 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002098 317.0
CMS1_k127_5667575_3 OmpA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000123 291.0
CMS1_k127_5667575_4 Domain of unknown function (DUF362) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000008784 254.0
CMS1_k127_5667575_5 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.00000000000000000000000000000000000000000000000000000000000000000001955 241.0
CMS1_k127_5667575_6 Putative TM nitroreductase - - - 0.00000000000000000000000000000000000000000000000000000000000001365 221.0
CMS1_k127_5667575_7 response regulator K02657,K03413 - - 0.000000000000000000000000000000000000000000000000000000000001352 231.0
CMS1_k127_5667575_8 - - - - 0.000000000000000000000000000001764 126.0
CMS1_k127_5667575_9 rubredoxin - - - 0.000000000000000000000000973 103.0
CMS1_k127_5675523_0 WD40-like Beta Propeller Repeat - - - 0.0000000000000000000000000000000000000000000000000000001518 215.0
CMS1_k127_5675523_1 - - - - 0.0000000000000000000000000000000001043 139.0
CMS1_k127_5675523_2 - - - - 0.0000000000000000000000000000001432 127.0
CMS1_k127_5675523_3 - - - - 0.000000000000002484 78.0
CMS1_k127_5675523_4 - - - - 0.0007658 47.0
CMS1_k127_5679768_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 - 2.7.7.6 0.0 1371.0
CMS1_k127_5679768_1 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 3.695e-303 943.0
CMS1_k127_5679768_2 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000001221 247.0
CMS1_k127_5679768_3 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 - - 0.00000000000000000000000000000000000000000000000000000000000000000002755 232.0
CMS1_k127_5679768_4 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.00000000000000002461 81.0
CMS1_k127_5691902_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 GO:0003674,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.7 5.559e-316 990.0
CMS1_k127_5691902_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 6.378e-287 885.0
CMS1_k127_5691902_10 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.0000000000000000000000000000000002799 136.0
CMS1_k127_5691902_2 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 3.743e-275 849.0
CMS1_k127_5691902_3 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001149 524.0
CMS1_k127_5691902_4 TIGRFAM competence damage-inducible protein CinA K03742,K03743 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006139,GO:0006259,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363 3.5.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002726 472.0
CMS1_k127_5691902_5 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002442 421.0
CMS1_k127_5691902_6 MiaB-like tRNA modifying enzyme K18707 - 2.8.4.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001491 298.0
CMS1_k127_5691902_7 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.0000000000000000000000000000000000000000000000000000000000000000002494 233.0
CMS1_k127_5691902_8 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016469,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0032991,GO:0033178,GO:0034220,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0045259,GO:0045261,GO:0046034,GO:0046390,GO:0046483,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.0000000000000000000000000000000000000000000000000001628 188.0
CMS1_k127_5691902_9 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045260,GO:0045263,GO:0045264,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098797,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.00000000000000000000000000000000000003468 150.0
CMS1_k127_5696746_0 Belongs to the RtcB family K14415 - 6.5.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009228 576.0
CMS1_k127_5696746_1 Sodium/hydrogen exchanger family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002973 445.0
CMS1_k127_5696746_2 Peptidase family M28 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000314 319.0
CMS1_k127_5696746_3 Nitroreductase family - - - 0.0000000000000000000000000000000000000000000000000000000002517 209.0
CMS1_k127_5696746_4 Protein of unknown function (DUF3175) - - - 0.00000000000000000000000000000000003086 137.0
CMS1_k127_5696746_5 peroxiredoxin activity K03564,K07638 - 1.11.1.15,2.7.13.3 0.000000000000000000000000000000002155 137.0
CMS1_k127_5696746_6 response regulator K02657,K03413 - - 0.000000000000000000000000005329 112.0
CMS1_k127_5696746_7 Calcineurin-like phosphoesterase superfamily domain - - - 0.0000000000000000002568 95.0
CMS1_k127_5696746_8 Dodecin K09165 - - 0.000000000000000003324 87.0
CMS1_k127_5697327_0 Putative nucleotidyltransferase substrate binding domain K07182 - - 3.307e-252 794.0
CMS1_k127_5697327_1 PFAM type II secretion system protein E K02669 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004618 533.0
CMS1_k127_5697327_2 PFAM MltA K08304 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001857 336.0
CMS1_k127_5697327_3 EXOIII K02342 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000001058 235.0
CMS1_k127_5697327_5 response regulator - - - 0.0000000002999 63.0
CMS1_k127_5702851_0 Belongs to the citrate synthase family K01647 - 2.3.3.1 6.808e-212 664.0
CMS1_k127_5702851_1 Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6- dimethylbenzimidazole (DMB) K00768 - 2.4.2.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006309 432.0
CMS1_k127_5708396_0 Peptidase dimerisation domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005394 475.0
CMS1_k127_5708396_1 methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000113 295.0
CMS1_k127_5708396_2 PFAM Methyltransferase type 11 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002517 278.0
CMS1_k127_5708396_3 - - - - 0.0000000000000000000000000000000000000000001222 167.0
CMS1_k127_5718254_0 PFAM Pyruvate flavodoxin ferredoxin oxidoreductase K00174 - 1.2.7.11,1.2.7.3 1.971e-222 692.0
CMS1_k127_5718254_1 NAD-specific glutamate dehydrogenase GdhA K15371 - 1.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001117 493.0
CMS1_k127_5718254_2 PFAM Thiamine pyrophosphate K00175 - 1.2.7.11,1.2.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007793 449.0
CMS1_k127_5718254_3 Pyruvate ferredoxin/flavodoxin oxidoreductase K00177 - 1.2.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001729 277.0
CMS1_k127_5718254_4 4Fe-4S ferredoxin, iron-sulfur binding K00176 - 1.2.7.3 0.000000000000000000000000000005948 119.0
CMS1_k127_5718254_5 Domain of unknown function (DUF3394) - - - 0.00000000000002869 74.0
CMS1_k127_5745365_0 Pilus formation protein N terminal region K02280 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002882 598.0
CMS1_k127_5745365_1 Putative Flp pilus-assembly TadE/G-like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004431 542.0
CMS1_k127_5745365_10 Predicted membrane protein (DUF2079) - - - 0.0006314 45.0
CMS1_k127_5745365_2 transferase activity, transferring glycosyl groups K00721,K10012,K20534 - 2.4.1.83,2.4.2.53 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001197 395.0
CMS1_k127_5745365_3 Flp pilus assembly protein RcpC/CpaB K02279 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000156 303.0
CMS1_k127_5745365_4 TadE-like protein - - - 0.0000000000000000000000000000000000000009689 154.0
CMS1_k127_5745365_5 Type IV leader peptidase family K02278 - 3.4.23.43 0.000000000000000000000000000000000000127 150.0
CMS1_k127_5745365_7 Methionine biosynthesis protein MetW - - - 0.000000000000000000000000007415 117.0
CMS1_k127_5745365_8 - - - - 0.00000000000001533 76.0
CMS1_k127_5745365_9 Flp Fap pilin component K02651 - - 0.00000000134 61.0
CMS1_k127_5766784_0 PFAM response regulator receiver K07662 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004526 279.0
CMS1_k127_5766784_1 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008744 292.0
CMS1_k127_5766784_2 Acyl-CoA dehydrogenase, C-terminal domain K15980 - - 0.00000000000000000000000000000000000000000000000000000000000003511 220.0
CMS1_k127_5766784_3 Patatin-like phospholipase K07001 - - 0.000000000000000000000000000000000000000000000000000000001177 212.0
CMS1_k127_5766784_4 Universal stress protein family - - - 0.000000000000000006004 87.0
CMS1_k127_5766784_5 DNA-binding transcription factor activity - - - 0.00000000000007597 76.0
CMS1_k127_5774596_0 FAD dependent oxidoreductase K07137 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004446 596.0
CMS1_k127_5774596_1 COG1902 NADH flavin oxidoreductases, Old Yellow Enzyme family K10680 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006435 528.0
CMS1_k127_5774596_10 Lysylphosphatidylglycerol synthase TM region K07027,K14205 - 2.3.2.3 0.000003302 53.0
CMS1_k127_5774596_2 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008918 287.0
CMS1_k127_5774596_3 TIGRFAM histidinol phosphate phosphatase HisJ family K04486 - 3.1.3.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005381 274.0
CMS1_k127_5774596_4 Uncharacterized BCR, YaiI/YqxD family COG1671 K09768 - - 0.000000000000000000000000000000000000000000000000000000000000000006908 227.0
CMS1_k127_5774596_5 - - - - 0.00000000000000000000000000000000000000001641 157.0
CMS1_k127_5774596_6 SnoaL-like domain - - - 0.0000000000000000000000000000005591 123.0
CMS1_k127_5774596_8 amino acid K16263 - - 0.0000000000009922 68.0
CMS1_k127_5774596_9 Lysylphosphatidylglycerol synthase TM region K07027,K14205 - 2.3.2.3 0.0000000103 60.0
CMS1_k127_5792261_0 isocitrate dehydrogenase, NADP-dependent, monomeric type K00031 - 1.1.1.42 0.0 1068.0
CMS1_k127_5792261_1 phosphomannomutase K01840,K15778 - 5.4.2.2,5.4.2.8 2.913e-196 620.0
CMS1_k127_5792261_2 response regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003243 335.0
CMS1_k127_5792261_3 NHL repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005744 284.0
CMS1_k127_5792261_4 PFAM Uncharacterised protein family (UPF0153) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000008677 253.0
CMS1_k127_5792261_5 Iron-sulfur cluster-binding domain - - - 0.00000000000000000000000000000000000000006481 164.0
CMS1_k127_5792261_6 - - - - 0.0000000000000000000000000000000001615 146.0
CMS1_k127_5792261_7 phosphorelay sensor kinase activity K01768,K03406,K07642 - 2.7.13.3,4.6.1.1 0.0000004932 51.0
CMS1_k127_5798359_0 AcrB/AcrD/AcrF family - - - 0.0 1274.0
CMS1_k127_5798359_1 HlyD family secretion protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001845 366.0
CMS1_k127_5798359_2 Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002088 371.0
CMS1_k127_5798359_3 Conserved TM helix - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003292 281.0
CMS1_k127_5798359_4 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000000000000000000000000000253 191.0
CMS1_k127_5798359_5 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.000000000000000000000000000000002706 133.0
CMS1_k127_5798359_6 MFS/sugar transport protein K06902 - - 0.000000000000000000227 89.0
CMS1_k127_5811962_0 ATP dependent DNA ligase C terminal region K01971 - 6.5.1.1 1.224e-297 935.0
CMS1_k127_5811962_1 PFAM Histone deacetylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008143 363.0
CMS1_k127_5811962_2 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000259 273.0
CMS1_k127_5811962_3 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001582 263.0
CMS1_k127_5811962_4 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.000000000000000000000000000000000000000000000000000000000000000000000005646 245.0
CMS1_k127_5811962_5 Protein of unknown function DUF72 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003713 247.0
CMS1_k127_5811962_6 PFAM CBS domain K04767 - - 0.000000000000000000000000000000000000000000000000000000003386 206.0
CMS1_k127_5811962_7 - - - - 0.0000000000003332 78.0
CMS1_k127_5814553_0 Cytochrome c biogenesis protein transmembrane region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001851 249.0
CMS1_k127_5814553_1 Cytochrome C assembly protein K02195 - - 0.00000000000000000000000000000000000000000000000000000000000000002195 231.0
CMS1_k127_5814553_2 Thioredoxin-like K02199,K03671 - - 0.0000000000000000000000000000000000000001299 156.0
CMS1_k127_5814553_3 PFAM cytochrome c-type biogenesis protein CcmB K02194 - - 0.000000000000000000000001855 107.0
CMS1_k127_5814553_4 Cytochrome C biogenesis protein K02200 - - 0.000000000000003241 81.0
CMS1_k127_5814553_6 - - - - 0.0000187 56.0
CMS1_k127_5827192_0 molybdenum-iron protein alpha chain K02586 - 1.18.6.1 0.0 1013.0
CMS1_k127_5827192_1 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 5.449e-214 675.0
CMS1_k127_5827192_10 Belongs to the P(II) protein family K02590 - - 0.000000000000000000000000000000000000000000000000000000000000009772 220.0
CMS1_k127_5827192_11 Belongs to the P(II) protein family K02589 - - 0.000000000000000000000000000000000000000000000000000000000002929 210.0
CMS1_k127_5827192_12 This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation K02591 - 1.18.6.1 0.000000000000000000000000000000000000000006192 154.0
CMS1_k127_5827192_13 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.000000000000000000000000001316 114.0
CMS1_k127_5827192_14 - - - - 0.000000000000000000000003729 106.0
CMS1_k127_5827192_15 Gram-negative-bacterium-type cell outer membrane assembly - - - 0.00000000000000001195 88.0
CMS1_k127_5827192_16 - - - - 0.0000001316 53.0
CMS1_k127_5827192_17 - - - - 0.00008549 55.0
CMS1_k127_5827192_2 PFAM sigma-54 factor interaction domain-containing protein K02584 - - 3.997e-208 659.0
CMS1_k127_5827192_3 The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components the iron protein and the molybdenum-iron protein K02588 - 1.18.6.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008786 537.0
CMS1_k127_5827192_4 Na+ dependent nucleoside transporter N-terminus K03317 GO:0003674,GO:0005215,GO:0005337,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008150,GO:0015858,GO:0015931,GO:0015932,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:1901264,GO:1901505,GO:1901642 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004357 537.0
CMS1_k127_5827192_5 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002631 498.0
CMS1_k127_5827192_6 Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine K12960 - 3.5.4.28,3.5.4.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003391 426.0
CMS1_k127_5827192_7 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004187 293.0
CMS1_k127_5827192_8 SNARE associated Golgi protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002298 258.0
CMS1_k127_5827192_9 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 - 2.7.4.25 0.0000000000000000000000000000000000000000000000000000000000000000003598 238.0
CMS1_k127_5928971_0 ATPases associated with a variety of cellular activities - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004685 584.0
CMS1_k127_5928971_1 IMG reference gene - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002065 461.0
CMS1_k127_5928971_10 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.0000000003991 68.0
CMS1_k127_5928971_2 Predicted membrane protein (DUF2079) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006515 449.0
CMS1_k127_5928971_3 Protein of unknown function (DUF2914) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004627 261.0
CMS1_k127_5928971_4 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000008837 241.0
CMS1_k127_5928971_5 - - - - 0.0000000000000000000000000000000000000000000000000000000000000001447 228.0
CMS1_k127_5928971_6 COG3307 Lipid A core - O-antigen ligase and related enzymes - - - 0.000000000000000000000000000000000000000000000000004599 199.0
CMS1_k127_5928971_7 Protein of unknown function (DUF2452) - - - 0.0000000000000000000000000000000000000000002788 164.0
CMS1_k127_5928971_8 Putative metal-binding motif - - - 0.00000000000000001865 91.0
CMS1_k127_5928971_9 Reverse transcriptase (RNA-dependent DNA polymerase) - - - 0.00000000000004554 74.0
CMS1_k127_5932455_0 type III restriction protein res subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001922 549.0
CMS1_k127_5932455_1 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002177 321.0
CMS1_k127_5932455_2 Nitroreductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002267 299.0
CMS1_k127_5932455_3 HAD-superfamily hydrolase, subfamily IIB - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005974 282.0
CMS1_k127_5932455_4 Protochlamydia outer membrane protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002708 260.0
CMS1_k127_5932455_5 alpha beta K06889 - - 0.0000000000000000000000000000000000000000000267 172.0
CMS1_k127_5932455_6 S4 domain K14761 - - 0.000000000000000001844 87.0
CMS1_k127_5932455_7 - - - - 0.00000000000000003238 84.0
CMS1_k127_5932455_8 Belongs to the SlyX family K03745 - - 0.00000008033 55.0
CMS1_k127_5950702_0 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 - - 7.127e-284 881.0
CMS1_k127_5950702_1 PFAM 2-nitropropane dioxygenase NPD K00459,K02371 - 1.13.12.16,1.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002229 518.0
CMS1_k127_5950702_2 Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control K00970,K00974 - 2.7.7.19,2.7.7.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002902 457.0
CMS1_k127_5950702_3 signal peptide peptidase SppA K04773 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000712 291.0
CMS1_k127_5950702_4 PFAM GGDEF domain containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002372 289.0
CMS1_k127_5950702_5 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) K05967 - - 0.00000000000000000000000000000000000000000000000002307 184.0
CMS1_k127_5950702_6 NUDIX domain K03574 - 3.6.1.55 0.0000000000000000000000000000000000519 138.0
CMS1_k127_5950702_7 regulation of translation K01524,K03530,K04764,K05788 - 3.6.1.11,3.6.1.40 0.000000000000000000000000000000004346 130.0
CMS1_k127_5950702_8 TIGRFAM Sua5 YciO YrdC YwlC family protein K07566 - 2.7.7.87 0.000000000000000000006285 93.0
CMS1_k127_5952699_0 COG0834 ABC-type amino acid transport signal transduction systems periplasmic component domain K02030 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004631 359.0
CMS1_k127_5952699_1 PFAM ABC transporter related K02028 - 3.6.3.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001648 355.0
CMS1_k127_5952699_2 Caspase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003157 284.0
CMS1_k127_5952699_3 Binding-protein-dependent transport system inner membrane component K02029 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005349 280.0
CMS1_k127_5952699_4 Binding-protein-dependent transport system inner membrane component K02029 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003222 278.0
CMS1_k127_5958190_0 Alpha-2-Macroglobulin K06894 - - 0.0 2083.0
CMS1_k127_5958190_1 Penicillin-Binding Protein C-terminus Family K05367 - 2.4.1.129 3.147e-306 959.0
CMS1_k127_5958190_10 amine dehydrogenase activity - - - 0.0000000000000000000000000001769 130.0
CMS1_k127_5958190_2 phage tail tape measure protein - - - 1.028e-254 839.0
CMS1_k127_5958190_3 Inner membrane protein CreD K06143 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001007 454.0
CMS1_k127_5958190_4 Holin of 3TMs, for gene-transfer release - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004386 268.0
CMS1_k127_5958190_5 secretion activating protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004893 255.0
CMS1_k127_5958190_6 LexA-binding, inner membrane-associated putative hydrolase - - - 0.00000000000000000000000000000000000000000000000000000001656 201.0
CMS1_k127_5958190_7 CHAT domain - - - 0.0000000000000000000000000000000000000000000000000000003558 219.0
CMS1_k127_5958190_8 His Kinase A (phosphoacceptor) domain K07641 - 2.7.13.3 0.00000000000000000000000000000000000000000664 159.0
CMS1_k127_5958190_9 nuclease K01174 - 3.1.31.1 0.0000000000000000000000000000000000000003129 156.0
CMS1_k127_5980381_0 HAD-superfamily hydrolase, subfamily IIB K00696 - 2.4.1.14 3.826e-250 782.0
CMS1_k127_5980381_1 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002795 561.0
CMS1_k127_5980381_10 Protein of unknown function (DUF1003) - - - 0.000000000000000000000000000109 120.0
CMS1_k127_5980381_13 GtrA-like protein - - - 0.000000000002279 72.0
CMS1_k127_5980381_2 Fad linked oxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004177 518.0
CMS1_k127_5980381_3 PFAM UbiA prenyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002463 495.0
CMS1_k127_5980381_4 PFAM peptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007864 420.0
CMS1_k127_5980381_5 PFAM Fatty acid hydroxylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003141 365.0
CMS1_k127_5980381_6 FAD binding domain K10960,K21401 - 1.3.1.111,1.3.1.83,1.3.99.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003547 349.0
CMS1_k127_5980381_7 Short-chain dehydrogenase reductase (SDR) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002632 329.0
CMS1_k127_5980381_8 Threonylcarbamoyl adenosine biosynthesis protein TsaE K06925 - - 0.0000000000000000000000000000000000000000004511 162.0
CMS1_k127_5990399_0 TIGRFAM TraB family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005888 532.0
CMS1_k127_5990399_1 Lysin motif K08307 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006719 401.0
CMS1_k127_5990399_2 PFAM Type II secretion system protein E K02454,K02652 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005355 404.0
CMS1_k127_5990399_3 Catalyzes the conversion of S-adenosyl-L-methionine (SAM) to carboxy-S-adenosyl-L-methionine (Cx-SAM) K15256 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000238 298.0
CMS1_k127_5990399_4 NUDIX domain K03574 - 3.6.1.55 0.000000000000000000000000000000000000000000000000000000000000000000000000000001109 265.0
CMS1_k127_5990399_5 Catalyzes carboxymethyl transfer from carboxy-S- adenosyl-L-methionine (Cx-SAM) to 5-hydroxyuridine (ho5U) to form 5-carboxymethoxyuridine (cmo5U) at position 34 in tRNAs K15257 - - 0.00000000000000000000000000000000000000000000000000000000000000000002226 242.0
CMS1_k127_5990399_7 CRS1_YhbY K07574 - - 0.00000000000000000000147 98.0
CMS1_k127_6001457_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 1.438e-257 812.0
CMS1_k127_6001457_1 Transglycosylase K05366 - 2.4.1.129,3.4.16.4 1.44e-208 669.0
CMS1_k127_6001457_2 TIGRFAM cytochrome c-type biogenesis protein CcsB - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002335 421.0
CMS1_k127_6001457_3 PFAM ResB family protein K07399 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000252 406.0
CMS1_k127_6001457_4 Belongs to the bacterial ribosomal protein bL28 family K02902 GO:0003674,GO:0003735,GO:0005198 - 0.000000000000000000000002086 105.0
CMS1_k127_6001457_6 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 0.000000001211 60.0
CMS1_k127_6005662_0 L,D-transpeptidase catalytic domain K21470 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001266 421.0
CMS1_k127_6005662_1 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000007892 135.0
CMS1_k127_6005662_2 Alkylmercury lyase - - - 0.0000000000000000000000000007224 119.0
CMS1_k127_6005662_3 - - - - 0.000000000000006727 75.0
CMS1_k127_6007909_0 it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins K02314 - 3.6.4.12 6.612e-224 701.0
CMS1_k127_6007909_1 binds to the 23S rRNA K02939 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000001014 169.0
CMS1_k127_6007909_2 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 GO:0003674,GO:0003824,GO:0004812,GO:0004823,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006429,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.4 0.000000000000000000000000000000000002146 139.0
CMS1_k127_6007909_3 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000003045 123.0
CMS1_k127_6007909_4 Predicted membrane protein (DUF2232) - - - 0.000000000000000000000000000009066 132.0
CMS1_k127_6032879_0 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K01663,K02500 - - 4.037e-253 789.0
CMS1_k127_6032879_1 Seven times multi-haem cytochrome CxxCH - - - 7.123e-241 750.0
CMS1_k127_6032879_2 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001457 518.0
CMS1_k127_6032879_3 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002301 499.0
CMS1_k127_6032879_4 Histidine kinase A domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004327 419.0
CMS1_k127_6032879_5 response regulator K02667 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001063 372.0
CMS1_k127_6032879_6 Histidine kinase K15011 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001239 354.0
CMS1_k127_6032879_7 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001262 310.0
CMS1_k127_6032879_8 Bacterial regulatory protein, Fis family K15012 - - 0.000000000000000000000000000000000000000000000000000000001188 207.0
CMS1_k127_6032879_9 NosL - - - 0.000000000000000000000001223 112.0
CMS1_k127_604582_0 Belongs to the carbamoyltransferase HypF family K04656 - - 4.071e-262 827.0
CMS1_k127_604582_1 hydrogenase expression formation protein HypD K04654 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001155 527.0
CMS1_k127_604582_2 Belongs to the NiFe NiFeSe hydrogenase large subunit family K00437,K05922,K06281 - 1.12.2.1,1.12.5.1,1.12.99.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002141 405.0
CMS1_k127_604582_3 COGs COG0378 Ni2 -binding GTPase involved in regulation of expression and maturation of urease and hydrogenase K04652 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007627 304.0
CMS1_k127_604582_4 hydrogenase expression formation protein HypE K04655 - - 0.000000000000000000000000000000000000000000000000000001871 194.0
CMS1_k127_604582_5 Hydrogenase maturation protease K03605 - - 0.00000000000000000000000000000000000000001139 159.0
CMS1_k127_604582_6 TIGRFAM hydrogenase assembly chaperone hypC hupF K04653 - - 0.000000000000000000000000000000000003147 139.0
CMS1_k127_604582_7 Probably plays a role in a hydrogenase nickel cofactor insertion step K04651 - - 0.00000000000000000000001069 104.0
CMS1_k127_6048258_0 Belongs to the glycosyl hydrolase 13 family K01214 - 3.2.1.68 0.0 1048.0
CMS1_k127_6048258_1 synthase K06044 - 5.4.99.15 3.253e-299 942.0
CMS1_k127_6048258_2 TIGRFAM malto-oligosyltrehalose trehalohydrolase K01236 - 3.2.1.141 8.711e-227 718.0
CMS1_k127_6048258_3 PFAM Glycosyl transferase, group 1 K13057 - 2.4.1.245 1.479e-198 625.0
CMS1_k127_6048258_4 transferase activity, transferring glycosyl groups - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001289 266.0
CMS1_k127_6048258_5 - - - - 0.000000000000000000000000000000000000000000000000000000003881 212.0
CMS1_k127_6064947_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338,K08675 - 3.4.21.53 0.0 1069.0
CMS1_k127_6064947_1 Peptidoglycan-binding domain 1 protein K08305 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002261 331.0
CMS1_k127_6064947_2 - - - - 0.00000000000000000000000000001502 119.0
CMS1_k127_6124147_0 Polysaccharide biosynthesis protein CapD - - - 6.019e-211 674.0
CMS1_k127_6124147_1 Putative beta-barrel porin 2 K20920 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001067 385.0
CMS1_k127_6124147_2 COG2826 Transposase and inactivated derivatives, IS30 family K07482 GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003824,GO:0004803,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006310,GO:0006313,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0030983,GO:0032135,GO:0032196,GO:0032991,GO:0032993,GO:0034641,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0140097,GO:1901360,GO:1901363 - 0.00000000000000000000000000000000000000000000000000004392 191.0
CMS1_k127_6124147_3 COG2826 Transposase and inactivated derivatives, IS30 family K07482 GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003824,GO:0004803,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006310,GO:0006313,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0030983,GO:0032135,GO:0032196,GO:0032991,GO:0032993,GO:0034641,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0140097,GO:1901360,GO:1901363 - 0.000000000000000000000000000000000000000000000003543 174.0
CMS1_k127_6124147_4 helix_turn_helix, Lux Regulon - - - 0.000000000000004737 76.0
CMS1_k127_6149437_0 ABC-type transport system involved in lipoprotein release permease component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005924 461.0
CMS1_k127_6149437_1 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K07277 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009071 470.0
CMS1_k127_6149437_2 MacB-like periplasmic core domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007565 387.0
CMS1_k127_6149437_3 Tetratricopeptide TPR_2 repeat protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007084 353.0
CMS1_k127_6149437_4 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002282 283.0
CMS1_k127_6149437_5 TamB, inner membrane protein subunit of TAM complex K09800 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000248 310.0
CMS1_k127_6149437_7 Family of unknown function (DUF5329) - - - 0.0000000000000000000000002611 110.0
CMS1_k127_6149437_8 CobQ CobB MinD ParA nucleotide binding K04562 - - 0.00000000000000000000002867 102.0
CMS1_k127_6169919_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.0 1131.0
CMS1_k127_6169919_1 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K14393 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001932 400.0
CMS1_k127_6169919_2 RNase_H superfamily K07502 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005498 298.0
CMS1_k127_6169919_3 PFAM Metal-dependent phosphohydrolase, HD - - - 0.00000000000000000000000000000000000000000000000000000000004022 213.0
CMS1_k127_6180683_0 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily K01464,K01465 GO:0003674,GO:0003824,GO:0004038,GO:0004151,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006144,GO:0006145,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016787,GO:0016810,GO:0016812,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046113,GO:0046390,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 3.5.2.2,3.5.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003586 556.0
CMS1_k127_6180683_1 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000248 493.0
CMS1_k127_6180683_2 Belongs to the ATCase OTCase family K00609 GO:0003674,GO:0003824,GO:0004070,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016741,GO:0016743,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002643 451.0
CMS1_k127_6180683_3 TIGRFAM type IV pilus assembly protein PilM K02662 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002836 399.0
CMS1_k127_6180683_4 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004497 284.0
CMS1_k127_6180683_5 PFAM Fimbrial assembly K02663 - - 0.00000000000000000000000000000000000006505 149.0
CMS1_k127_6204175_0 TonB-dependent receptor plug K02014,K16092 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001784 621.0
CMS1_k127_6204175_1 PFAM Nucleoside recognition - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001489 368.0
CMS1_k127_6204175_2 Diphthamide synthase - - - 0.000000000000000000000000000006175 123.0
CMS1_k127_6208010_0 SigmaW regulon antibacterial - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009986 505.0
CMS1_k127_6208010_1 NfeD-like C-terminal, partner-binding - - - 0.000000000000000000000000000000000000000000008532 168.0
CMS1_k127_6208010_2 Sodium hydrogen exchanger - - - 0.000000000004048 67.0
CMS1_k127_6208010_3 Sodium hydrogen exchanger - - - 0.000000001951 62.0
CMS1_k127_6208010_4 Membrane-bound serine protease (ClpP class) K07403 - - 0.0000001623 53.0
CMS1_k127_6210910_0 Catalyzes the formation of a hydroxyacyl-CoA by addition of water on enoyl-CoA. Also exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities K01782 GO:0003674,GO:0003824,GO:0003857,GO:0004300,GO:0006082,GO:0006629,GO:0006631,GO:0006635,GO:0008150,GO:0008152,GO:0008692,GO:0009056,GO:0009062,GO:0009987,GO:0016042,GO:0016054,GO:0016491,GO:0016614,GO:0016616,GO:0016829,GO:0016835,GO:0016836,GO:0016853,GO:0016854,GO:0016856,GO:0019395,GO:0019752,GO:0030258,GO:0032787,GO:0034440,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0046395,GO:0055114,GO:0071704,GO:0072329,GO:1901575 1.1.1.35,4.2.1.17,5.1.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004091 514.0
CMS1_k127_6210910_1 PFAM AMP-dependent synthetase and ligase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009998 476.0
CMS1_k127_6210910_2 Thiolase, C-terminal domain K00626,K00632 - 2.3.1.16,2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000691 456.0
CMS1_k127_6210910_3 PFAM Acyl-CoA dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000535 305.0
CMS1_k127_6210910_4 Histidine kinase K13587 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002182 297.0
CMS1_k127_6210910_5 helical bimodular (HBM) domain K03406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002363 283.0
CMS1_k127_6210910_6 response regulator K02657,K03413 - - 0.000000000000000000000000000000000000000000000000000000000000000000000005488 265.0
CMS1_k127_6210910_7 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.00000000000000000000000000000000000000000000000000000000001031 220.0
CMS1_k127_6210910_8 Two component signalling adaptor domain K03408 - - 0.000000000000000000000000000000000000000000002184 169.0
CMS1_k127_6210910_9 PFAM response regulator receiver K03413 - - 0.0000000000000000000000000000000004242 134.0
CMS1_k127_6213548_0 This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation K02591 - 1.18.6.1 2.089e-270 835.0
CMS1_k127_6213548_1 PFAM Dinitrogenase iron-molybdenum cofactor biosynthesis K02585 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007376 367.0
CMS1_k127_6213548_2 TIGRFAM Nitrogenase molybdenum-iron protein alpha chain K02586 - 1.18.6.1 0.00000000000000000002266 90.0
CMS1_k127_6213548_3 Ferredoxin - - - 0.0000000002353 61.0
CMS1_k127_6216317_0 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 1.559e-294 908.0
CMS1_k127_6216317_1 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 8.077e-227 711.0
CMS1_k127_6216317_2 TIGRFAM Sua5 YciO YrdC YwlC family protein K07566 - 2.7.7.87 0.0000000000000000000000000000000000000000000000000000000001843 211.0
CMS1_k127_6216317_3 Belongs to the GppA Ppx family K01524 - 3.6.1.11,3.6.1.40 0.000404 47.0
CMS1_k127_6221849_0 Doubled CXXCH motif (Paired_CXXCH_1) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003008 292.0
CMS1_k127_6221849_1 TIGRFAM 40-residue YVTN family beta-propeller repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000001159 252.0
CMS1_k127_6221849_2 PFAM SMP-30 Gluconolaconase - - - 0.0000000000000000000000000000000000000000000000000000000000000002633 231.0
CMS1_k127_6221849_3 Doubled CXXCH motif (Paired_CXXCH_1) - - - 0.000000000000000000000000000000000000000000000000000000000000002526 235.0
CMS1_k127_6221849_4 Doubled CXXCH motif (Paired_CXXCH_1) - - - 0.0000000000000000000000000000000000000000000000001201 182.0
CMS1_k127_6221849_5 Right handed beta helix region - - - 0.000002213 55.0
CMS1_k127_6225577_0 Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O K05601 - 1.7.99.1 1.973e-267 831.0
CMS1_k127_6225577_1 PFAM metal-dependent phosphohydrolase HD sub - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004612 320.0
CMS1_k127_6225577_2 Sodium hydrogen exchanger family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004402 304.0
CMS1_k127_6225577_3 PFAM 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003639 265.0
CMS1_k127_6225577_4 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.000000000000000000000000000000000000000000000000000000002182 206.0
CMS1_k127_6225577_5 MafB19-like deaminase K01487 - 3.5.4.3 0.000000000000000000000000000000000000000000000000000002668 195.0
CMS1_k127_6225577_6 Heat shock protein DnaJ domain protein K06203,K07126 - - 0.00000000000000000000000008619 110.0
CMS1_k127_6225577_7 Tetratricopeptide TPR_1 repeat-containing protein - - - 0.000000006353 64.0
CMS1_k127_6225577_8 PFAM CBS domain - - - 0.0000006321 57.0
CMS1_k127_6228680_0 PFAM Endonuclease Exonuclease phosphatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001346 340.0
CMS1_k127_6228680_1 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003286 296.0
CMS1_k127_6228680_2 OmpA family K02557 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002881 273.0
CMS1_k127_6228680_3 Membrane-associated sensor domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000003013 237.0
CMS1_k127_6228680_4 diguanylate cyclase - - - 0.000000000000000000000000000000000000002029 154.0
CMS1_k127_6228680_5 cheY-homologous receiver domain - - - 0.0000000000000003525 87.0
CMS1_k127_6228680_6 integral membrane protein - - - 0.00000000000101 76.0
CMS1_k127_6228680_7 zinc-ribbon domain - - - 0.0002275 51.0
CMS1_k127_6243559_0 HlyD family secretion protein K07798,K15727 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005125 590.0
CMS1_k127_6243559_1 Outer membrane efflux protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007547 405.0
CMS1_k127_6243559_2 AcrB/AcrD/AcrF family K07787 - - 0.0000000000000000005184 88.0
CMS1_k127_6243559_3 - - - - 0.00000000000000001128 86.0
CMS1_k127_6243559_4 4Fe-4S single cluster domain of Ferredoxin I K05337 - - 0.0000000000003951 71.0
CMS1_k127_6262223_0 PFAM aminotransferase class-III K01845 - 5.4.3.8 4.551e-196 620.0
CMS1_k127_6262223_1 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006806 481.0
CMS1_k127_6262223_10 Belongs to the ParB family K03497 - - 0.0000000000000000005994 89.0
CMS1_k127_6262223_11 Belongs to the pseudouridine synthase RsuA family K06178,K06182 - 5.4.99.21,5.4.99.22 0.000000000000000006946 84.0
CMS1_k127_6262223_2 Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily K00254,K02823,K17828 GO:0003674,GO:0003824,GO:0004152,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006206,GO:0006207,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016491,GO:0016627,GO:0016635,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019856,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046112,GO:0046390,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 1.3.1.14,1.3.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002115 411.0
CMS1_k127_6262223_3 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002022 346.0
CMS1_k127_6262223_4 TIGRFAM HAD-superfamily hydrolase, subfamily IA, variant 3 K20881 - 3.1.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000002849 264.0
CMS1_k127_6262223_5 Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD( K02823 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000007757 262.0
CMS1_k127_6262223_6 PFAM purine or other phosphorylase family 1 - - - 0.000000000000000000000000000000000000000000000000001433 193.0
CMS1_k127_6262223_7 Belongs to the bacterial histone-like protein family K05788 - - 0.0000000000000000000000000000000000000004382 149.0
CMS1_k127_6262223_8 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.00000000000000000000000000002962 120.0
CMS1_k127_6262223_9 function for this protein is to guide the assembly of the membrane sector of the ATPase enzyme complex K02116 - - 0.000000000000000000000006742 103.0
CMS1_k127_630850_0 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 - 8.392e-239 753.0
CMS1_k127_630850_1 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005737 336.0
CMS1_k127_630850_10 PilZ domain - - - 0.00000000000000000005728 96.0
CMS1_k127_630850_2 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005691 320.0
CMS1_k127_630850_3 methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000559 278.0
CMS1_k127_630850_4 Lysine methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000006043 258.0
CMS1_k127_630850_5 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.00000000000000000000000000000000000000000000000000000000000000000009395 239.0
CMS1_k127_630850_6 PFAM GGDEF domain containing protein - - - 0.00000000000000000000000000000000000000000000000000000000001331 217.0
CMS1_k127_630850_7 TIGRFAM Protein of - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000000000001097 124.0
CMS1_k127_630850_8 4Fe-4S binding domain - - - 0.0000000000000000000000000002502 114.0
CMS1_k127_630850_9 Protein of unknown function (DUF456) K09793 - - 0.0000000000000000000001239 103.0
CMS1_k127_633191_0 PFAM ATPase associated with various cellular activities K03924 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001408 476.0
CMS1_k127_633191_1 von Willebrand factor, type A K07114 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003307 377.0
CMS1_k127_633191_2 protein containing a von Willebrand factor type A (vWA) domain K07114 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001282 358.0
CMS1_k127_633191_3 conserved protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004699 324.0
CMS1_k127_633191_4 Domain of unknown function (DUF4381) - - - 0.000000000000000000000000000003326 125.0
CMS1_k127_633284_0 Sodium/hydrogen exchanger family K03455 - - 3.233e-233 739.0
CMS1_k127_633284_1 carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity - - - 2.465e-199 630.0
CMS1_k127_633284_3 Calcineurin-like phosphoesterase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001556 513.0
CMS1_k127_633284_4 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 - 5.4.99.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001106 286.0
CMS1_k127_633284_5 MarC family integral membrane protein K05595 - - 0.0000000000000000000000000000000000000000000000000000000000000000009682 234.0
CMS1_k127_633284_6 Cytochrome c bacterial - - - 0.00000000000008457 73.0
CMS1_k127_633284_7 - - - - 0.00000000003458 67.0
CMS1_k127_647970_0 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003091 508.0
CMS1_k127_647970_1 Pfam:CPSase_L_chain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008943 400.0
CMS1_k127_647970_2 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001262 394.0
CMS1_k127_647970_3 Transporter associated domain K06189 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001774 297.0
CMS1_k127_647970_4 4Fe-4S dicluster domain K11473 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001335 301.0
CMS1_k127_647970_5 Thioredoxin - - - 0.0000000000000000000000000000000000005207 144.0
CMS1_k127_647970_6 Thioredoxin - - - 0.0000000000000000000004754 101.0
CMS1_k127_647970_7 PFAM PhoH family protein K06217 - - 0.000000000003871 69.0
CMS1_k127_673984_0 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis K21071 - 2.7.1.11,2.7.1.90 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001931 561.0
CMS1_k127_673984_1 Mur ligase middle domain K11754 - 6.3.2.12,6.3.2.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002753 415.0
CMS1_k127_673984_2 Belongs to the Fur family K03711,K09825 - - 0.000000000000000000000000000000000000000003923 160.0
CMS1_k127_673984_3 HNH nucleases - - - 0.000000000000000000000000000000001797 132.0
CMS1_k127_673984_4 Belongs to the HesB IscA family - - - 0.000000000000000000003853 94.0
CMS1_k127_673984_5 ISXO2-like transposase domain - - - 0.00000000007678 62.0
CMS1_k127_673984_6 Belongs to the HesB IscA family - - - 0.0000005826 51.0
CMS1_k127_680105_0 chelatase, subunit ChlI K07391 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003142 610.0
CMS1_k127_680105_1 Putative ATP-binding cassette K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001142 607.0
CMS1_k127_680105_2 SMART AAA ATPase K02450 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005107 516.0
CMS1_k127_680105_3 PFAM transglutaminase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002095 405.0
CMS1_k127_680105_4 PFAM ABC transporter related K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001169 340.0
CMS1_k127_680105_5 Type II secretion system protein B K02451 - - 0.00000000000000000000008294 109.0
CMS1_k127_680105_6 PFAM Type IV pilus assembly PilZ - - - 0.0000000004084 66.0
CMS1_k127_725394_0 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756,K01857 - 4.3.2.2,5.5.1.2 3.448e-226 707.0
CMS1_k127_725394_1 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003755 559.0
CMS1_k127_725394_2 SMART phosphoesterase PHP domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001812 319.0
CMS1_k127_725394_3 PAS domain - - - 0.00000000000000000000000000000005764 130.0
CMS1_k127_725394_4 Domain of unknown function (DUF4911) - - - 0.0000009622 53.0
CMS1_k127_776092_0 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K07277 - - 1.202e-255 818.0
CMS1_k127_776092_1 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 4.978e-246 767.0
CMS1_k127_776092_2 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 GO:0000166,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005524,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0030163,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0044238,GO:0051301,GO:0070011,GO:0071704,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575 - 3.943e-202 636.0
CMS1_k127_776092_3 TIGRFAM lipoprotein releasing system, transmembrane protein, LolC E family K09808 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003416 499.0
CMS1_k127_776092_4 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002738 482.0
CMS1_k127_776092_5 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001548 383.0
CMS1_k127_776092_6 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000245 336.0
CMS1_k127_776092_7 Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner K09810 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001208 264.0
CMS1_k127_776092_8 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0000000000000000000000000000000000000000000000000000000000000001197 227.0
CMS1_k127_776092_9 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.0000000000000000000000000000000000000000000000000000004904 202.0
CMS1_k127_807611_0 COG0501 Zn-dependent protease with chaperone function K03799 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001588 557.0
CMS1_k127_807611_1 PFAM LemA family protein K03744 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000514 279.0
CMS1_k127_807611_2 TPM domain K06872 - - 0.0000000000000000000000000000000000000000000000000000004559 201.0
CMS1_k127_83595_0 Glycosyltransferase like family 2 K00721 - 2.4.1.83 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003224 317.0
CMS1_k127_83595_1 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000268 279.0
CMS1_k127_83595_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000009653 231.0
CMS1_k127_83595_3 PFAM Nitroreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000028 228.0
CMS1_k127_83595_4 Acyl carrier protein phosphodiesterase - - - 0.000000000000000000000000000000000000000000000000000000000001656 216.0
CMS1_k127_83595_5 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.000000000000000000000000000000000000000000000000000007071 201.0
CMS1_k127_83595_6 Predicted permease - - - 0.0000000000000000000000000000000000000000000000000007716 189.0
CMS1_k127_83595_7 Predicted permease - - - 0.0000000000000000000000000000000000000000000005418 169.0
CMS1_k127_83595_8 Protein of unknown function (DUF2723) - - - 0.000000000005662 74.0
CMS1_k127_83595_9 Psort location Cytoplasmic, score - - - 0.000000002929 63.0
CMS1_k127_84910_0 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 1.383e-201 635.0
CMS1_k127_84910_1 LemA family K03744 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007401 289.0
CMS1_k127_84910_2 Two component transcriptional regulator, winged helix family - - - 0.0000000000000000000000000000000007155 134.0
CMS1_k127_84910_3 GHKL domain - - - 0.000000000000000000000000008583 115.0
CMS1_k127_876523_0 ATP-dependent Clp protease ATP-binding subunit ClpA K03694 - - 2.168e-269 847.0
CMS1_k127_876523_1 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation K06891 - - 0.0000000000000000000000000000000008238 132.0
CMS1_k127_906358_0 PFAM TRAP C4-dicarboxylate transport system permease DctM subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001347 585.0
CMS1_k127_906358_1 PFAM Bacterial extracellular solute-binding protein, family 7 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007218 372.0
CMS1_k127_906358_2 TRAP transporter T-component - - - 0.00000000000000000000000000000000000000000000000000000000000000000006797 239.0
CMS1_k127_906358_3 PFAM Tripartite ATP-independent periplasmic transporter, DctQ component - - - 0.0000000000000000000000000000000000006186 145.0
CMS1_k127_906358_4 DJ-1/PfpI family K03152 - 3.5.1.124 0.00000000000000000000000000000003373 128.0
CMS1_k127_922987_0 DNA segregation ATPase, FtsK SpoIIIE family K03466 - - 4.777e-221 696.0
CMS1_k127_922987_1 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 GO:0000906,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.78 0.00000000000000000000000000000000000000000000000000000000000000001249 225.0
CMS1_k127_922987_2 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.000000000000000000000000000000006403 132.0
CMS1_k127_922987_3 DNA segregation ATPase, FtsK SpoIIIE family K03466 - - 0.00000000000000000000000000005547 123.0
CMS1_k127_971867_0 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005725 467.0
CMS1_k127_971867_1 Domain of unknown function (DUF5011) - - - 0.0000000000000000000000000000000000000000000000000000000000000000001146 252.0
CMS1_k127_971867_2 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process K10535 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0006091,GO:0006807,GO:0008150,GO:0008152,GO:0009061,GO:0009987,GO:0015975,GO:0015980,GO:0016491,GO:0016661,GO:0016663,GO:0019329,GO:0019331,GO:0034641,GO:0042597,GO:0044237,GO:0044281,GO:0044464,GO:0045333,GO:0047991,GO:0055114 1.7.2.6 0.00000000000000000000000000000002401 130.0
CMS1_k127_971867_3 - - - - 0.000000000000000000000008432 108.0
CMS1_k127_971867_4 conserved protein, contains double-stranded beta-helix domain - - - 0.000000000000000000007734 92.0
CMS1_k127_993037_0 Sodium/hydrogen exchanger family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001148 539.0
CMS1_k127_993037_1 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000131 391.0
CMS1_k127_993037_2 MarC family integral membrane protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004531 264.0